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  • American Association for the Advancement of Science (AAAS)  (1,208)
  • Springer  (58)
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  • 1
    Electronic Resource
    Electronic Resource
    Springer
    Polymer bulletin 24 (1990), S. 445-450 
    ISSN: 1436-2449
    Keywords: Poly(oxymethylene) ; Poly(ether-ether-ketone) ; DSC ; Kinetics ; Melt temperature ; Crystallization
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology , Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics , Physics
    Notes: Summary The influence of the melt temperature (T1) on the crystallization kinetics and the morphology of two semicrystalline polymers: poly(oxymethylene): T m 0 =198° C and poly(ether-ether-ketone) T m 0 =380° C) was investigated using thermal analysis and optical microscopy. For different melt temperatures (T1), isothermal and nonisothermal crystallizations were analysed using the AVRAMI and OZAWA models. Using different analyses, for both polymers we observed a spherulitic growth with the following influence of the melt temperature on the number of spherulites: -T1〈T m 0 produces many small spherulites -T1〉T m 0 gives rise to few large spherulites
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  • 2
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    Springer
    Colloid & polymer science 260 (1982), S. 641-642 
    ISSN: 1435-1536
    Keywords: Kinetics ; Nucleation ; Water ; Emulsion
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology , Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics
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  • 3
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    Springer
    Colloid & polymer science 262 (1984), S. 677-682 
    ISSN: 1435-1536
    Keywords: Kinetics ; methacrylamide ; reaction scheme ; viscosity ; additives
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology , Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics
    Notes: Abstract The aqueous polymerization of methacrylamide initiated by potassiumpersulfate-L-cystein hydrochloride redox system has been studied at 35±0.01
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  • 4
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    Journal of inorganic and organometallic polymers and materials 4 (1994), S. 251-260 
    ISSN: 1572-8870
    Keywords: Kinetics ; metal exchange reaction ; Cu(II)-poly(vinyl alcohol) ; Zn(II)-EDTA
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The kinetics of the metal exchange reaction between Cu(II)-poly(vinyl alcohol) [Cu(II)-PVA] and Zn(II)-ethylenediamine-N,N,N′,N′-tetraacetic acid [Zn(II)-EDTA] has been studied by mixing both solutions in a spectrophotometer at pH 10.0 to 11.0, ionic strength μ=0.10(KNO3), and 15 to 35°C. The reaction is initiated by the formation of unstable Cu(II)-H-PVA through attack of H+ ion on the Cu(II)-PVA complex, and both reactions, ligand exchange and metal exchange, proceed simultaneously. The metal exchange step may be rate determining. The rate equation and rate constants of this reaction were determined as follows: −d[Cu(II)-PVA]/dt=k 0(H)[PVA−][Cu(II)-PVA] [Zn(II)-EDTA], wherek 0(H)=k 1+(k′2+k′3)[H+],k 1=5.98±1.64M −1 s−1, andk 2+k 3=k′2 K Cu(II)-H-PVA −H +k′3 K Zn(II)-EDTA H =(5.91±0.89)×107 M −2 s−1.
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  • 5
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    Journal of solution chemistry 19 (1990), S. 937-944 
    ISSN: 1572-8927
    Keywords: Kinetics ; hydrolysis ; anion exchanger ; ring phosphorus oxoanion
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract Ring phosphorus oxoanion, hexapotassium dodecaoxohexaphosphate(III), (DOHP), was hydrolyzed in anion exchangers in order to elucidate the physicochemical state in the solid phase. The hydrolysis of DOHP obeys pseudo first order kinetics as is the case in aqueous solution. The hydrolysis rate constants k were determined as a function of the external solution pH or proton concentration in an anion exchanger. It was estimated from the Donnan equation and from the spectral change of an acid base indicator in the anion exchanger. The difference in k in aqueous and in the anion exchanger phase is discussed.
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  • 6
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    Journal of solution chemistry 21 (1992), S. 93-103 
    ISSN: 1572-8927
    Keywords: Kinetics ; solvolysis ; complex ions ; solvent mixtures
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract Rates of solvolysis of [Co(CN) 5 Cl] 3− have been determined in a range of water-rich water + 2-propanol mixtures over a range of temperatures and they show no simple correlation with dielectric constant. The variation of the enthalpy and entropy of activation with solvent composition show broad extrema and these are discussed in relation to the physical properties of the media. The application of a free energy cycle to the dissociative loss of the chloride ion in the transition state shows that the effect of changes in solvent structure as the alcohol content increases is to stabilize the emergent pentacyanocobaltate(III) ion Co(CN) 5 2− relative to the chloropentacyanocobaltate(III) anion in the initial state.
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  • 7
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    Catalysis letters 18 (1993), S. 209-218 
    ISSN: 1572-879X
    Keywords: Kinetics ; heptane reforming ; Pt/BaL zeolite catalysts
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The kinetics of heptane reforming over 0.64% Pt/KBaL have been measured over a wide range of conditions from 390 to 475 ° C, 0.05 to 1.00 atm heptane, and 0.2 to 25.0 atm hydrogen. Below about 6 atm H2, the catalyst deactivates due to carbon fouling of the platinum particles. The reaction rate increases with hydrogen pressure under these conditions, presumably because this accelerates the rate of carbon hydrogenation off the metal surface. Above 6 atm H2, no deactivation occurs. The activation energies and reaction orders in heptane and hydrogen at high H2 pressure are: 39 kcal/mol, 0.7 and −1.9 for hydrogenolysis; 60 kcal/mol, 0.6 and −2.8 for isomerization; and 58 kcal/mol, 0.4 and −2.7 for dehydrocyclization. These kinetics are the same as those observed over platinum on nonacidic supports, and indicate that the reaction mechanism on Pt/KBaL is no different from that on monofunctional Pt catalysts.
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  • 8
    ISSN: 1434-4475
    Keywords: Acetanilide ; Bromination ; Kinetics
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The kinetics of the bromination of acetanilide has been studied with the diffusion layer titration method. The results have been obtained using the apparatus which consists of the ring-disc electrode and an amperostat-potentiostat system. Dependence of the ring current on the disc current has been determined as a function of rotation speeds of the electrode, of the solution concentration and temperature. It has been shown the bromination reaction of acetanilide exhibits by first order kinetics. In that case Br2 and Br3 − are the brominating species. The rate of bromination changes with the concentration of the Br− ions. This reaction rate depends on reactions of molecular bromine with acetanilide. For 0.033〈[Br−]〈0.173M the rate constant changes in the following range: $$17530M^{ - 1} s^{ - 1}〈 k〈 6400M^{ - 1} s^{ - 1} ([H + ] = 1,34;T = 298K)$$
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  • 9
    ISSN: 1434-4475
    Keywords: Kinetics ; Mechanism ; Mononitrosopiperazine ; N-Nitrosation ; Piperazine
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Description / Table of Contents: Zusammenfassung Der Mechanismus der Bildung vonN-Nitroso-Verbindungen, die als potentielle carcinogene Substanzen gelten, wurde untersucht. Die Kinetik der Nitrosierung von Piperazin (PIP) in wäßriger Perchlorsäurelösung wurde mittels einer differentiellen spektrophotometrischen Methode verfolgt. Es ergab sich für denpH-Bereich 0,85–4,36 folgendes Zeitgesetz: $$v_0 = \left[ {nitrite} \right]_0 2 \left[ {PIP} \right]_0 /\left( {1 + f/\left[ {H^ + } \right]} \right)^2 \left( {g \left[ {PIP} \right]_0 + h + j\left[ {H^ \div } \right]} \right)$$ wobei [Nitrit]0 und [PIP]0 die anfänglichen stöchiometrischen Konzentrationen bedeuten. Bei 298,2 K und μ=1,0M,f=(1,17±0,11) 10−3 M,g=(3,5±0,7)·10−2 M s,h=2,6·10−6 M 2 s andj=(0,95±0,04)M s. Bei Erhöhung der Acidität ([HClO4]≥1M) tritt ein neuer kinetischer Term auf: $$v_0 ' = p\left[ {Nitrit} \right]_0 \left[ {PIP} \right]_0 $$ Bei 298,2 K und μ=3,0M,p=(1,9±0,2) 10−3 M −1 s−1. Es wird ein genereller Mechanismus für die Nitrosierung jedesN-nitrosierbaren Substrates in wäßriger Perchloratlösung vorgeschlagen, wobei als nitrosierende Agentien ausschließlich N2O3 und H2NO2 +/NO+ auftreten. Es werden die Besonderheiten dieses Mechanismus bezüglich derpK-Werte derN-nitrosierbaren Substrate diskutiert.
    Notes: Abstract The mechanism of formation ofN-nitroso compounds, which are considered as potential chemical carcinogens was studied. The kinetics of nitrosation of piperazine (PIP) in aqueous solution of perchloric acid have been investigated using a differential spectrophotometric technique. Based on our experimental results, the following rate law, in thepH-range 0.85 4.36, is proposed: $$v_0 = \left[ {nitrite} \right]_0 2 \left[ {PIP} \right]_0 /\left( {1 + f/\left[ {H^ + } \right]} \right)^2 \left( {g \left[ {PIP} \right]_0 + h + j\left[ {H^ \div } \right]} \right)$$ where [nitrite]0 and [PIP]0 represent initial stoichiometric concentrations. At 298.2K and μ=1.0M,f=(1.17±0.11) 10−3 M,g=(3.5±0.7) 10−2 M s,h=2.6×10−6 M 2 s andj=(0.95±0.04)M s. When the acidity is increased ([HClO4]≥1M), a new kinetic term comes into play: $$v_0 ' = p\left[ {nitrite} \right]_0 \left[ {PIP} \right]_0 $$ At 298.2 K and μ=3.0M,p=(1.9±0.2) 10−3 M −1 s−1. A general mechanism for the nitrosation of anyN-nitrosable substrate in aqueous perchloric solution in which the only nitrosating agents are N2O3 and H2NO2 +/NO+ is proposed. Also, the various particularities of this mechanism, according to thepK of theN-nitrosable substrate, are discussed.
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  • 10
    ISSN: 1434-4475
    Keywords: Galactitol ; Kinetics ; Mechanism ; Oxidation ; Reduction ; Xylitol
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Description / Table of Contents: Zusammenfassung Das Geschwindigkeitsgesetz der Titelreaktion ist in beiden Fällen erster Ordnung bezüglich Hexacyanoferrat(III). Die Oxidation ist erster Ordnung bei niedrigen Konzentrationen von Xylit und Galaktit und geht bei Erhöhung der Konzentration gegen null. In gleicher Weise wurde eine Kinetik erster Ordnung bezüglich Hydroxyl bei niedrigen Konzentrationen und eine erniedrigte Ordnung bei höheren Konzentrationen für die Oxidation von Xylit beobachtet; bei Galaktit bleibt die Oxidation auch bei höheren Hydroxyl-Konzentrationen erster Ordnung. Es wird angenommen, daß die Reaktion über einen aktivierten Komplex zwischen [KFe(CN)6]2− und dem Substrat-Anion verläuft; dieser Komplex zerfällt in [KFe(CN)6]3− und ein Substrat-Radikal. Ein möglicher Reaktionsmechanismus wird vorgeschlagen.
    Notes: Abstract Kinetics of oxidation of xylitol and galactitol by hexacyanoferrate(III) ion in aqueous alkaline medium is reported. The reaction rate is of first order with respect to hexacyanoferrate(III) in each substrate. The reaction is first order at lower concentrations of xylitol and galactitol and tends towards zero order as the concentration increases. Similarly first order kinetics was obtained with respect to hydroxide ion at lower concentrations and tends to lower order at higher concentration in the oxidation of xylitol; in the oxidation of galactitol the reaction is first order with respect to hydroxide ion even up to manyfold variation. The course of reaction has been considered to proceed through the formation of an activated complex between [K Fe(CN)6]2− and substrate anion which decomposes slowly into radical and [K Fe(CN)6]3−. A probable reaction mechanism is proposed.
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  • 11
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    Monatshefte für Chemie 112 (1981), S. 287-292 
    ISSN: 1434-4475
    Keywords: Activation energy ; Kinetics ; Methyl-vinyl ketone ; Polarography ; Polymerization
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The homogeneous polymerization of methyl-vinyl ketone in diluted methanol solutions in presence of proton donors is studied using the polarographic method. The effect of the cation of the indifferent electrolyte is investigated as well as the influence of small quantities of H2O. Suggestions were made about the possible mechanisms of these influences in the general scheme of the process proposed byHolleck et al.
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  • 12
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    Monatshefte für Chemie 113 (1982), S. 1087-1092 
    ISSN: 1434-4475
    Keywords: Dissolution ; Kinetics ; Pyrrhotite ; Rotating disc
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Description / Table of Contents: Zusammenfassung Die Auflösungsgeschwindigkeit von natürlichem monoklinen Pyrrhotin, FeS1.14, wurde in sauerstofffreien LösungenS([H+]=0.1, [Na+]=0.9, [ClO 4 − ]=1.0 mol kg−1) mit Hilfe der Methode der rotierenden Scheibe bestimmt. Im Temperaturbereich von 40–90° erfolgt die Auflösungsreaktion kinetisch kontrolliert, wobei eine Aktivierungsenergie von 14±1 kcal mol−1 (59±5 kJ mol−1) gefunden wurde.
    Notes: Abstract Using the rotating disc method, the rates of dissolution of natural monoclinic pyrrhotite, FeS1.14, in oxygen-free aqueous solutionsS([H+]=0.1, [Na+]=0.9, [ClO 4 − ]=1.0 mol kg−1) were determined. In the temperature range 40–90 °C the dissolution reaction occurs under kinetic control; the activation energy being 14±1 kcal mol−1 (50±5 kJ mol−1).
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  • 13
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    Monatshefte für Chemie 113 (1982), S. 1239-1244 
    ISSN: 1434-4475
    Keywords: Allyl alcohol ; Kinetics ; Mechanism ; Oxidation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Description / Table of Contents: Zusammenfassung Die Kinetik der Oxidation von Allylalkohol mitN-Bromsuccinimid (NBS) wurde bei 35 °C in wäßrigem Medium untersucht. Die Reaktion zeigt erste Ordnung gegenüberNBS und Allylalkohol. Bei relativ hoher Säurekonzentration zeigt sich keine Änderung der Reaktionsgeschwindigkeit, bei niedriger Säurekonzentration wird die Reaktionsgeschwindigkeit beträchtlich erhöht. Es wurde kein primärer Salzeffekt festgestellt. Bei varriierender Quecksilberacetatkonzentration bleibt die Reaktionsgeschwindigkeit gleich, bei Abwesenheit von Quecksilberacetat wird jedoch die Geschwindigkeitskonstante erhöht. Die kinetischen Parameter,E a, derArrheniusfaktorA, ΔH ≠, ΔG ≠ und ΔS ≠ wurden bestimmt. Ein Geschwindigkeitsgesetz in Übereinstimmung mit den experimentellen Befunden wurde abgeleitet und ein Mechanismus vorgeschlagen.
    Notes: Abstract The kinetics of oxidation of allyl alcohol byN-bromosuccinimide (NBS) has been studied at 35 °C in aqueous medium. The reaction shows first order dependence on bothNBS and allyl alcohol. In fairly high acid concentration, there is no change in the rate of the reaction but at low acid concentration, the rate is considerably enhanced. There is no primary salt effect. At varying mercuric acetate concentrations, the rate constant remains the same. But in the absence of mercuric acetate, the rate is enhanced. The kinetic parameters,E a,Arrhenius factorA, ΔH≠, ΔG≠ and ΔS≠ have been calculated. A rate law in agreement with experimental results has been derived. A mechanism is proposed.
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  • 14
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    Monatshefte für Chemie 113 (1982), S. 887-893 
    ISSN: 1434-4475
    Keywords: Diazotation ; Kinetics ; α-Naphthylamine
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract Optimal diazotation conditions were determined by means of extinction measurements at various experimental conditions. The optimal conditions found arep H=9,5, the amount of phenol is 1 250 times the amount of α-naphthylamine.
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  • 15
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    Monatshefte für Chemie 114 (1983), S. 773-781 
    ISSN: 1434-4475
    Keywords: Diastereomers ; 2,3-Dihydrobilatrienes-abc ; Kinetics ; Saturation-Transfer-Kinetics ; Phytochrome Models
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract From kinetic and equilibrium measurements the activation and thermodynamic parameters of diastereomeric 2,3-dihydrobilatrienes-abc in positions “4” and “15” are deduced. Compared to bilatrienes-abc a pronounced thermal lability of these diastereomers is observed—the exocyclic double bond of the saturated lactam ring being the more labile one. This feature may be of relevance to the thermal cascades and dark reactions observed for phytochrome.
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  • 16
    ISSN: 1434-4475
    Keywords: Iodine monochloride ; Kinetics ; Solvent effects
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Description / Table of Contents: Zusammenfassung Die Kinetik der Addition von ICl zu einigen Vinylverbindungen in Nitrobenzol als Lösungsmittel wurde untersucht. In allen Fällen ist die Reaktion von zweiter Ordnung hinsichtlich ICl und von erster Ordnung hinsichtlich des Substrats, d. h. mit einer Gesamtordnung von drei. Geschwindigkeitskonstanten wurden für jedes Substrat bei 20°, 30°, 40° und 50°C gemessen. AusArrhenius-Diagrammen wurden Aktivierungsenergien ermittelt und auch andere kinetische und thermodynamische Parameter wurden bestimmt. Ein Mechanismus wird vorgeschlagen, wobei die verschiedenen Parameter diskutiert werden. Lösungsmitteleffekte werden ebenfalls diskutiert und die Daten mit Nitrobenzol und Essigsäure als Lösungsmittel miteinander verglichen.
    Notes: Abstract The kinetics of the addition of iodine monochloride (ICl) to some vinyl compounds in nitrobenzene solvent was investigated. In all cases the reaction follows second order dependence on ICl and first order on the substrate, making the total order three. Rate constants were measured for each substrate at 20°, 30°, 40° and 50°C.Arrhenius plots were made from which activation energies were evaluated. Other kinetic and thermodynamic parameters are reported. A suitable mechanism is proposed for the reaction and based on this, the various parameters are discussed. Solvent effects are discussed and the data with nitrobenzene and acetic acid solvents are compared.
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  • 17
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    Monatshefte für Chemie 115 (1984), S. 1185-1197 
    ISSN: 1434-4475
    Keywords: Mono and polycarboxylic esters ; Metal salt catalysis ; Kinetics ; Chromatographic analysis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The alcoholysis of various esters of aromatic carboxylic esters with octadecanol in the presence of lead stearate was investigated by chromatographic analysis of the reaction mixtures. The reactivity of the esters was found to be strongly affected by the substitution pattern of the aromatic nucleus as well as by the structure of the alkoxy group. Electron donating substituents in a suitable position lead to a remarkable increase in reactivity compared to the unsubstituted alkyl esters.
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  • 18
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    Monatshefte für Chemie 121 (1990), S. 571-576 
    ISSN: 1434-4475
    Keywords: Acetanilide ; Kinetics ; Mechanism ; Oxidation ; Vanadium(V)
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Description / Table of Contents: Zusammenfassung Es wurden kinetische Untersuchungen der Oxydation von Acetanilid mit Vanadium(V) in schwefelsaurem Medium bei konstanter Ionenstärke durchgeführt. Gegenüber dem Oxidans ist die Reaktion erster Ordnung, die Reaktionsordnung gegenüber Acetanilid variiert zwischen 1 und 0. Die Reaktion folgt einem von der Säurekatalyse unabhängigen Weg, wobei die Abhängigkeit von H+ quadratisch ist. Ein Bunnett-Plot zeigt, daß das Wasser als Nucleophil wirkt. Die thermodynamischen Parameter wurden berechnet. Ein möglicher Reaktionsmechanismus und ein Geschwindigkeitsnetz, das mit diesen Daten in Einklang ist, wird angegeben.
    Notes: Summary The kinetics of the oxidation of acetanilide with vanadium(V) in sulphuric acid medium at constant ionic strength has been studied. The reaction is first order with oxidant. The order of reaction in acetanilide varies from one to zero. The reaction follows an acid catalyzed independent path, exhibiting square dependence in H+. A Bunnett plot indicates that the water acts as a nucleophile. The thermodynamic parameters have been computed. A probable reaction mechanism and rate law consistent with these data are given.
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  • 19
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    Monatshefte für Chemie 123 (1992), S. 291-299 
    ISSN: 1434-4475
    Keywords: Aluminium(III) ; Chloroacetate buffer ; Chromotropic acid ; Kinetics
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Summary The kinetics of the reaction of aluminium(III) with chromotropic acid (H4 L) by formation of the complex AlL − was studied in the range ofpH=(2.34...3.23) and by variation of the buffer addition to the Al(III) solution. The results leads to a reaction scheme with the species AlOH2+, Al(OH)2 + and H2 L 2− in Al(III) solutions “not prebuffered”, in Al(III) solutions “prebuffered” additionally the species AlClac 2−. The difference in the course of the functionsk exp =f[c 0(Al);c(H+)] in the Al(III) solutions not prebuffered respective prebuffered was explained: Chromotrophic acid as de facto neutral ligand does not react — contrary to the anionic ligands — with the dimeric Al(III) species present in the Al(III) solutions prebuffered. Water exchange rate constants for the contributing species according to the Eigen-Tamm-model were evaluated and correspond very well with the expected values.
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  • 20
    ISSN: 1434-4475
    Keywords: Kinetics ; Negative salt effect ; Oxidation ; Stopped-flow
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The influence of NaClO4, NaCl and Na2SO4 on the oxidation of Fe(phen) 3 2+ by Ce(IV) was investigated by means of the stopped-flow method. At the concentrations range of NaClO4 and NaCl 0.1–1.0M the rate constant values decrease from 1.03·105 to 0.56·105M−1s−1 and from 1.08·105 to 0.81·105M−1s−1 respectively. In varying concentrations of Na2SO4 solutions (0.05–0.35M) the rate constant values decrease from 1.05·105M−1s−1 to 0.45·105M−1s−1. Taking into account the negative salt effect the mechanism of the reaction progress is proposed.
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  • 21
    ISSN: 1434-4475
    Keywords: Arginine ; Catalysis ; Kinetics ; Mechanism ; Oxidation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Description / Table of Contents: Zusammenfassung Die Oxidation erfolgt sowohl mit als auch ohne Cu(II)-Katalysator in erster Ordnung bezüglich des Oxidationsmittels und des Substrats; inverse Ordnung wird bezüglich der Alkalikonzentration beobachtet. Bis zu einer Cu(II)-Konzentration von≤2×10−5 M ist die Geschwindigkeitskonstante der Katalysatorkonzentration proportional; darüber wird eine konstantbleibende Geschwindigkeit beobachtet, die nun von der Cu(II)-Konzentration unabhängig ist. Neutralsalze haben keinen Effekt auf die Geschwindigkeitskonstante. Es wird für den katalysierten und unkatalysierten Reaktionsablauf ein Mechanismus vorgeschlagen und ein mathematischer Ansatz präsentiert.
    Notes: Abstract The kinetics of uncatalysed and Cu(II) catalysed oxidation of arginine monohydrochloride was investigated. Both reactions follow a singular order dependence each in oxidant and substrate. An inverse order dependence is reported with the alkali concentration. A plot of observed rate constant versus Cu(II) concentrations Cu(II)≤2.0×10−5 M is linear; from the intercept the rate constant for the uncatalysed pathway was calculated. However, at high copper ion concentrations i.e. Cu(II)〉2.0×10−5 M a fixed value of rate constant was found for all catalyst concentrations. Added neutral salts show an insignificant effect on the reaction rate. Mechanisms were proposed for both cases and rate expressions were derived by applying steady state assumptions.
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  • 22
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    Monatshefte für Chemie 124 (1993), S. 1077-1081 
    ISSN: 1434-4475
    Keywords: Kinetics ; Carboplatin ; Photoaquation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Description / Table of Contents: Zusammenfassung Es wurde die Stabilität wäßriger Carboplatin-Lösungen unter verschiedenen experimentellen Bedingungen untersucht. Dabei wurde festgestellt, daß die Zersetzungsgeschwindigkeit bei Belichtung gegenüber der Zersetzung im Dunklen ansteigt. Die Reaktion folgt erster Ordnung und hängt stark von der Lichtintensität und nur wenig von der Temperatur ab. Je nach experimentellen Bedingungen liegt die Quantenausbeute zwischen 0.05 und 0.2. Die Ergebnisse erlauben den Schluß, daß die Zersetzung durch Belichtung über einen Photoaquationsprozeß verläuft.
    Notes: Summary The stability of carboplatin in aqueous solutions at different experimental conditions was studied. It was observed that the degradation rate of carboplatin under illumination increases notably with respect to the rate obtained in the dark. The time course of carboplatin in solution follows a first-order kinetics with rate constants that depend on the incident light intensity and little with temperature. The quantum yield of the carboplatin degradation lies between 0.05 and 0.2 depending on the experimental conditions. From the results obtained in the present work it is concluded that carboplatin is degraded under illumination by means of a photoaquation process.
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    Journal of industrial microbiology and biotechnology 7 (1991), S. 15-18 
    ISSN: 1476-5535
    Keywords: Ca-alginate immobilized cell ; Enzyme coimmobilization ; Kinetics ; Lactose hydrolysis ; Batch fermentation ; Shake flask
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: Summary The performance of β-galactosidase coimmobilized cells ofSaccharomyces cerevisiae was evaluated during shake flask fermentation of deproteinized cheese whey lactose to ethanol. The performance of the coimmobilized enzyme treatment was compared to that of a treatment using acid prehydrolyzed whey lactose (a readily available substrate). Enzyme coimmobilization resulted in a slower rate and a lower extent of substrate utilization, thus giving a lower maximum ethanol concentration (13.5 versus 16.7 g/l). It did result, however, in a better ethanol yield (95% vs. 89% theoretical). It appears that, compared to acid prehydrolysis of whey lactose, through β-galactosidase coimmobilization we could succeed in obtaining substantial process simplifications, thus saving in equipment and operating cost, while gaining in ethanol yield at the cost of some reasonable loss in the rate and the extent of lactose utilization.
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  • 24
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    Calcified tissue international 33 (1981), S. 431-439 
    ISSN: 1432-0827
    Keywords: Apatite ; Fluorhydroxyapatite ; Crystal growth ; Kinetics
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine , Physics
    Notes: Summary The kinetics of seeded crystal growth of calcium apatites were studied in dilute supersaturated solutions at various levels of fluoride concentrations. Initial precipitation rates were enhanced by fluoride concentrations higher than 0.05 ppm. The analytical results are consistent with the precipitation of fluoridated hydroxyapatites, Ca5Fx-(OH)1−x(PO4)3, FHA. The degree of fluoridation, X, appears to be determined by the activity of HF in solution, which varies for the various initial fluoride levels but remains fairly constant during precipitation. Thus the composition of the precipitating phase was the same for a given solution whether 25 or 10 mg of hydroxyapatite was added as seeds. All the experimental results are consistent with the BCF theory, which relates the mean linear rate of growth, RL, to the supersaturation, DS, by the expression RL=C1T(DS-1)1n(DS)tanh(C2/T 1n DS), in which DS is the supersaturation defined by mean molar activities with respect to the precipitating FHA, T the absolute temperature, and C1 and C2 are constants calculated from the experimental results. Consequently, the crystal growth appears to take place in surface kinks and to be controlled by surface diffusion. Since crystal growth in most biological systems takes place at fluoride concentrations within the experimental range used, it seems probable that it occurs along the model advanced in the present investigation.
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    Journal of molecular evolution 33 (1991), S. 343-356 
    ISSN: 1432-1432
    Keywords: Qβ RNA variants ; Ethidium resistance ; Heterogeneity ; Kinetics
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary A rapidly acquired partial resistance to the replicase antagonist, ethidium bromide (EB), seen by Spiegelman and coresearchers in Qβ RNA variants competitively replicating under defined conditions in vitro, reflected existence of a pool of mutant RNA molecules, preadapted to EB, and their cross-propagation from the pre-EB optimum species, MDV-1, and from other kindred variants, some of which remained undetected, according to this quantitative analysis of midivariant RNA replication kinetics. DNAlike features of their evolution, such as the cloning of variants from an MDV-1 subtype and a complicance with the fundamental theorem of natural selection, resulted from the suppression, both real and apparent, of intrinsic RNA heterogeneity through sampling and detection methods, and also by the ascendency of self-propagation over cross-propagation with advancement of a superior variant. The deficit in mean polymer fitness, compared with optimum levels, determines the lower limit of this heterogeneity. Stability conditions for frequency equilibrium and strategies for counteracting viral drug resistance have been considered.
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    Monatshefte für Chemie 111 (1980), S. 1125-1133 
    ISSN: 1434-4475
    Keywords: Diazotization ; Kinetics ; α-Naphthylamine
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    Topics: Chemistry and Pharmacology
    Notes: Abstract The kinetics of the diazotization of α-naphthylamine1 in water HCl solution from 0,2N to 2.0N at 0 °C were investigated. It was found that the nitrosation reaction $$\alpha --C_{10} H_7 NH_2 + NOCl\mathop \rightleftharpoons \limits^{k_v } \alpha --C_{10} H_7 NH_2 NO^ + + Cl^ - $$ is a preceeding advance-back-reaction (velocity coefficient of the nitrosation is 1.92·1010l mol−1 s−1). The decomposition of I by splitting off a proton is the rate determining reaction. The free enthalpy of activation for the nitrosation reaction equals 12.94 kJ/mol.
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    Monatshefte für Chemie 111 (1980), S. 1135-1142 
    ISSN: 1434-4475
    Keywords: Hammet parameter ; Kinetics ; Mechanism ; Thermodynamic parameters
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Description / Table of Contents: Zusammenfassung Die Kinetik der Reaktion von drei substituierten Acetophenonen mit Bromsuccinimid in Perchlorsäure in Gegenwart von Quecksilberacetat wurde untersucht. Die Reaktion war von nullter Ordnung gegenüberNBS, erster Ordnung gegenüber den Ketonen und [H+]. Mögliche Mechanismen der Reaktion werden diskutiert und auch eine Geschwindigkeitsgleichung wird abgeleitet. Es wurden die thermodynamischen Parameter der Reaktion bestimmt und auch einHammet'scher ϖ-Wert (+0,6) für die Oxidation der Methylarylketone ermittelt.
    Notes: Abstract The kinetics of the reaction of three substituted acetophenones withN-Bromosuccinimide was studied in perchloric acid media in presence of mercuric acetate. The reactions were found to be zero order with respect toNBS while the order with respect to ketones and [H+] was found to be unity. The addition of succinimide mercuric acetate and sodium perchlorate has no effect on the rate of oxidation and the rate increases with the decrease in dielectric constant of the medium. Kinetic investigations have revealed that the order of reactivity ism-nitroacetophenone 〉 p-chloroacetophenone 〉 p-methylacetophenone. TheArrhenius equation has been found to be valid in the temperature range 35–55°. Thermodynamic parameters have been calculated. Mechanistic pathways of the reactions are discussed and a rate equation is derived.Hammett's plot gives a ϖ value of +0.60 for methyl-aryl-ketones.
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    Monatshefte für Chemie 113 (1982), S. 3-14 
    ISSN: 1434-4475
    Keywords: Graphite ; Kinetics ; Reduction ; Thoria ; Thoriumcarbide
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Description / Table of Contents: Zusammenfassung Die Reduktion von Thoriumoxid mit Graphit im Überschuß wurde mittels einer Thermowaage zwischen 1620 und 1920 K im Vakuum untersucht. Ab ThO2:C=1:50 war die Reaktionsgeschwindigkeit vom Mischungsverhältnis unabhängig; das Endprodukt war immer ThC2. Der logarithmische Gewichtsverlust war direkt proportional der Zeit, und dieArrheniusgerade zeigte einen Knickpunkt bei 1710 K: unterhalb dieser Temperatur ergab sich eine Aktivierungsenergie von 440 kJ, oberhalb eine solche von 260 kJ. Die Temperatur des Knickpunkts entspricht der Umwandlungstemperatur von monoklinem in tetragonal raumzentriertes ThC2.
    Notes: Abstract The reduction of thoria with excess graphite was studied with a thermo-balance in vacuum between 1620 and 1920 K. From Th02:C=1:50 the rate of reaction was independent of the ratio of the reactants; the endproduct was always ThC2. The logarithmic weight loss was directly proportional to the time, and theArrhenius plot showed a break at 1710 K: below this temperature the activation energy was found to be 440 kJ, above 260 kJ. The temperature corresponding to the break coincides with the transition temperature of monoclinic to body-centered tetragonal ThC2.
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  • 29
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    Keywords: Kinetics ; Ligand-transfer ; Thallium (III)
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    Topics: Chemistry and Pharmacology
    Notes: Abstract The transfer of oxinate ions from thallium (III)oxinate to trivalent Fe(DMF) 6 3+ in propylenecarbonate takes place via rearrangements within a rapidly formed binuclear thallium(III)—iron(III) complex. In a last rapid step this rearranged complex reacts with excess reactants to the final products whose composition accordingly depends on the ratio of the reactant concentrations.
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  • 30
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    Keywords: Hydroperoxide ; Kinetics
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    Topics: Chemistry and Pharmacology
    Description / Table of Contents: Zusammenfassung Bei der Zersetzung von α,α-Dimethylbenzylhydroperoxid (1) unter Verwendung eines Kupfer(II)chlorkomplexes wurde die neue Feststellung gemacht, daß das Produktverhältnis Acetophenon (2): α,α-Dimethylbenzylalkohol (3) stets 2:1 ist. Die Kinetik der Reaktion wurde untersucht und ein Mechanismus vorgeschlagen, der mit dem experimentellen Resultat konsistent ist.
    Notes: Abstract In the decomposition of α,α-dimethylbenzyl hydroperoxide (1) by use of copper(II) chlorocomplexes, the novel fact was found that the product ratio of acetophenone (2) to α,α-dimethylbenzyl alcohol (3) is 2 to 1. The kinetics of this result was investigated and a mechanism consistent with the experimental result is proposed.
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    Monatshefte für Chemie 114 (1983), S. 411-423 
    ISSN: 1434-4475
    Keywords: Bromination ; Dihydroxydiphenylmethanes ; Intramolecular hydrogen bonding ; Kinetics
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    Topics: Chemistry and Pharmacology
    Notes: Abstract The bromination of 15 dinuclear phenolic compounds (dihydroxydiphenylmethanes, methylene bisphenols) by molecular bromine in acetic acid was studied kinetically at 22°C. In all compounds the electrophilic substitution occurred inortho-position to the phenolic hydroxy group of the methyl phenol unit while the non reacting neighboring unit was differently substituted by H, CH3,t-Bu and NO2. A decrease in the reaction rate was observed in 2,2′-dihydroxydiphenylmethanes, where the +M-effect of the hydroxy group is diminished by an intramolecular hydrogen bond. The strength of this hydrogen bond may be influenced mainly by steric factors. Strong electron withdrawing substituents like NO2 show a rate decreasing influence on the reactivity of the neighboring unit also in 2,4′- and 4,4′-dihydroxydiphenylmethanes.
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    Monatshefte für Chemie 115 (1984), S. 1385-1392 
    ISSN: 1434-4475
    Keywords: Periodate oxidation ; Solvent effect ; Reaction rate ; Kinetics ; Octacyanomolybdate (IV)
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Description / Table of Contents: Zusammenfassung Die Kinetik der Oxidation von Mo(CN) 8 4− mit IO4/− wurde in Ethanol—Wasser über einen Temperaturbereich von 15–35 °C untersucht. Der Effekt der Lösungsmittelzusammensetzung auf die Reaktionsgeschwindigkeit und der Mechanismus der Reaktion werden diskutiert. Die Aktivierungsparameter sind angeführt. Es wird ein „Inner-Sphere“-Mechanismus vorgeschlagen, der mit den kinetischen Ergebnissen konsistent ist.
    Notes: Abstract The kinetics of the oxidation of Mo(CN) 8 4− by IO 4 − has been studied in ethanol—water solvent mixtures over a temperature range of 15–35 °C. The effect of solvent composition on the reaction rate and the mechanism has been investigated. Activation parameters are given. An inner-sphere mechanism, consistent with the kinetic results, is proposed.
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    Monatshefte für Chemie 115 (1984), S. 405-414 
    ISSN: 1434-4475
    Keywords: Kinetics ; Mechanism ; Oxidation
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    Topics: Chemistry and Pharmacology
    Description / Table of Contents: Zusammenfassung Es wurde die Kinetik der Oxidation von Chinol mit Quecksilbernitrat in Gegenwart einer Mischung ausAcOH-H2O-HNO3 untersucht, um die aktive Species bei der Oxidation in diesem Medium aufzuklären. Die Reaktionsordnung ist sowohl bezüglich des Chinols als auch des Hg(II)-Ions erster Ordnung. Die Reaktionsgeschwindigkeit erhöht sich leicht mit der HNO3-Konzentration und auch mit abfallender Dielektrizitätskonstante des Mediums. Die Reaktionsgeschwindigkeit sinkt mit dem Zusatz von KNO3. Es ist keinerlei Hinweis auf eine Komplexbildung zwischen Chinol und Hg(II) festzustellen. Die Resultate der Untersuchungen legen HgNO + 3 als aktive Spezies nahe. Es wird ein möglicher Mechanismus mit einem Zweielektronen-Transfer im geschwindigkeitsbestimmenden Schritt vorgeschlagen. Das dabei produziertep-Benzochinon existiert nicht in freier Form, sondern es bildet einen stabilen 1 : 1-Komplex mit Quecksilbernitrat; dieser Komplex wurde mittels TLC und IR charakterisiert.
    Notes: Abstract The kinetics of oxidation of quinol by mercuric nitrate in presence ofAcOH-H2O-HNO3 mixture has been investigated in order to find the active species of mercuric nitrate involved in the oxidation in this medium. The order of reaction both with respect to quinol and Hg(II) is found to be one. The reaction rate slightly increases with the increase in [HNO3] and the decrease of the dielectric constant of the medium. The reaction rate retards on addition of KNO3. There is no evidence for complex formation between quinol and Hg(II). These results suggest that HgNO + 3 might be the active species in this medium. A probable mechanism involving a two electron transfer in the rate determining step has been suggested. The producedp-benzoquinone does not exist in free state but forms a stable (1 : 1) complex with mercuric nitrate which has been characterized by TLC and IR studies.
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    Monatshefte für Chemie 115 (1984), S. 697-704 
    ISSN: 1434-4475
    Keywords: Electrohydrodimerization ; Benzylidenemalononitriles ; Kinetics ; Electrohydrodimerization ; Benzylidenemalononitriles ; Kinetics
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Description / Table of Contents: Zusammenfassung Mittels derivativer cyclischer Voltammetrie wurden für die Titelreaktion Geschwindigkeitskonstanten und Aktivierungsparameter erhalten (Dimethylformamid als Lösungsmittel). Benzyliden-,p-Methyl- undp-Methoxybenzylidenmalonnitril reagieren ausschließlich über die Dimerisierung ihrer Anionenradikale (Radikal-Radikal-Kopplung), währenddessen die Dimerisierung vonp-Fluorbenzylidenmalonnitril zu 25% über die Kopplung des Anionenradikals mit dem Substrat erfolgt.
    Notes: Abstract Rate constants and activation parameters for the reductive dimerization of substituted benzylidenemalononitriles were obtained from derivate cyclic voltammetry measurements in dimethylformamide as solvent. Benzylidene-,p-methyl-andp-methoxybenzylidenemalononitrile react exclusively via dimerization of their anion radicals (radical-radical coupling) while forp-fluorobenzylidenemalononitrile 25% of the dimerization proceeds by coupling of the anion radical with the substrate.
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    Monatshefte für Chemie 124 (1993), S. 1149-1156 
    ISSN: 1434-4475
    Keywords: Aroyl azide ; 4-Toluoyl azide ; Alcoholysis ; Aminolysis ; “Nucleophilic catalysis” ; Kinetics ; Steric effects
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Description / Table of Contents: Zusammenfassung Primäre Amine reagieren in nicht-nucleophilen Lösungsmitteln mit 4-Toluoyl-azid in einer einheitlichen Reaktion 2. Ordnung, die durch die Größe des Amins und die Lösungsmittel-Polarität beeinflußt wird. Das ändert sich in Gegenwart von Alkoholen, wo auch die Bildung von 4-Toluylsäureestern beobachtet wird. Diese Konkurrenzreaktion wird durch den „kleinsten“ Alkohol (Methanol) und/oder die relativ größeren Amine (Cylohexylamin bzw. 3-Pentylamin) besonders stark begünstigt. Verglichen mit der einfachen Alkoholyse von 4-Toluoylazid wird eine enorme Beschleunigung der Esterbildung, proportional zur Konzentration des nucleophilen Amins, beobachtet. Der Reaktionsmechanismus wird mit besonderer Berücksichtigung sterischer Effekte bei der Konkurrenz von Nucleophilen um das Aroylazid diskutiert.
    Notes: Summary Primary amines2[R:n-butyl(2a), cyclohexyl (2b), 3-pentyl (2c)] react with 4-toluoyl azide1 in non-nucleophilic solvents in a clear second order reaction, which is strongly dependent on the size of the amine2 and the solvent polarity (k 2 [Acetonitril; 25 °C]: 15.51 (2a), 0.83 (2b) and 0.19 (2c) 1/mol·min; ΔH#=22.1 kJ/mol, ΔS#=−170.5 J/mol·K [2b in Acetonitril]). Drastic changes occur in the presence of nucleophilic solvents. With nucleophilic amines2 added to these in the solutions a concurrent reaction with alcohols4 [R: methyl (4a), ethyl (4b),n-butyl (4c)] yielding 4-toluoyl ester5 is observed. This is especially dominating with the “smallest” alcohol methanol (4a) and/or effectively promoted by “bulky” amines (2b, 2c; up to 99%5a). Compared with the pure alcoholysis a huge acceleration of the ester formation, proportional to the cencentration of the nucleophilic amine2, is observed. The reaction mechanism is discussed with special emphasis on steric effects in the competition of nucleophiles for the aroyl azide1.
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    Applied microbiology and biotechnology 38 (1992), S. 214-219 
    ISSN: 1432-0614
    Keywords: Amylase ; Arthrobacter sp. ; Kinetics ; Yeast glykogen ; Trehalose ; Maltose
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: Abstract The kinetics of amylolytic enzyme formation by a yeast cell wall lytic Arthrobacter species were studied. Cultivation on autoclaved cells of baker's yeast showed that amylase formation was closely related to trehalose and glycogen dissimilation. Growth on yeast glycogen (0.5%) proceeded quite rapidly (μ = 0.31 h−1) with extensive amylase formation during exponential cell multiplication and a further low increase in activity during the stationary phase. Beside amylolytic activity [450 units (U) l−1] the formation of a relatively high level of α-glucosidase (90 U l−1) was detected, the latter almost exclusively bound to bacterial cells. Growth on 0.5% trehalose occurred at a reduced rate (μ = 0.22 h−1) with post-logarithmic enzyme synthesis in the stationary phase. Amylase activity attained a level of 1200 U l−1, whereas α-glucosidase was very low at 7.7 U l−1. Continuous culture experiments in the chemostat showed maximal volumetric productivity of amylase (105 U l−1 h−1) at a dilution rate of 0.15 h−1. Growth on various carbohydrates revealed low levels of amylolytic activity (〈100 U l−1), which were increased by a α-1,4-glucans and oligosaccharides such as starch, dextrin, maltotriose and maltose. On 0.5% maltose, growth-associated enzyme synthesis (230 U l−1) was detected at a reduced growth rate (μ = 0.14 h−1). Amylolytic enzyme preparations from the culture fluid showed an unusual cleavage pattern; acting on starch, the polymer was almost completely hydrolysed to maltotriose and maltose in a molar ratio of 3:1.
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    Calcified tissue international 50 (1992), S. 137-143 
    ISSN: 1432-0827
    Keywords: Hydroxyapatite ; Enamel ; Dissolution ; Kinetics ; Caries
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    Topics: Biology , Medicine , Physics
    Notes: Summary The present study was undertaken in an attempt to relate the kinetics of hydroxyapatite dissolution to solution parameters, under experimental conditions relevant to the dental caries process. Thus, the dissolution of hydroxyapatite was studied in acetic, lactic, and dilute phosphoric acid solutions having initial pH values from 4 to 6. Rates of dissolution and the corresponding degree of saturation with respect to hydroxyapatite were determined at various times throughout the dissolution process. Rates of dissolution of all solutions were found to decrease with increasing degree of solution saturation and were greater in solutions with lower initial values of pH. However, rates of dissolution in partially saturated phosphoric acid solutions (without added organic acid) were at least one order of magnitude lower than those observed in the organic acid buffers with the same initial pH, over the same range of saturation values. The data obtained are consistent with a surface-controlled dissolution model in which the rate of dissolution is dependent upon the degree of saturation and the sum of the activities of the acidic species in solution, i.e., phosphoric and organic acids. These results suggest that in order to assess the cariogenic potential of a given medium (e.g., plaque fluid), one must determine both the degree of saturation with respect to the dissolving mineral and the activities of acidic species in solution.
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    Calcified tissue international 36 (1984), S. 48-59 
    ISSN: 1432-0827
    Keywords: Salivary proteins ; Adsorption ; Thermodynamics ; Kinetics ; Hydroxyapatite
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine , Physics
    Notes: Summary Equilibrium and kinetic experiments were conducted to investigate the factors determining the adsorption of salivary macromolecules onto hydroxyapatite. Using amino acids and other small adsorbates, it was determined that the carboxyl attached to the α carbon does not appear to adsorb onto HA and the affinities of side-chain carboxyls are much smaller than that of the phosphate group (phosphoserine). Hydroxyl (serine) displays an extremely high affinity, but its adsorption site on HA is different and the number of such sites is much smaller than found for the rest of the functional groups investigated. It is shown that the information obtained from small molecules cannot be readily applied to prediction of the adsorption behavior of salivary macromolecules and polypeptides. The kinetics of adsorption of the salivary phosphopeptide statherin, a polyaspartate, and the salivary prolinerich phosphoprotein PRP3 are consistent with the reversibility of the adsorption process; no conclusion was possible in the case of the protein PRP1. Apparent irreversibility cannot be explained on the basis of multipoint binding or the properties of the carboxyl versus phosphate group; it appears that secondary structure determines to a significant extent the adsorption properties of the macromolecules. Calculation of the thermodynamic molar quantities of adsorption of PRP1, PRP3, andl-ASP onto HA showed that the process is entropically driven. The functional relationship between partial molar entropy and adsorption coverage is similar for the two proteins, but quite different from that for aspartate. Explanations for these results are advanced on the bases of changes in structure configurations and displacement of water from the adsorbate and the adsorbent surface, the second factor being the dominant one in the adsorption of a small molecule such asl-ASP.
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    Sexual plant reproduction 5 (1992), S. 163-168 
    ISSN: 1432-2145
    Keywords: Pollen tube ; Kinetics ; Hydrodynamics ; Agapanthus sp
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary In vitro pollen germination of Agapanthus umbellatus follows a logistic-type curve. It has a lag phase, which corresponds to pollen grain (PG) hydration, followed by an exponential phase — initial pollentube (PT) growth. The lag phase is characterized by an increase of about 40% in the volume of the PG as a result of the hydration process. During the exponential phase the PT emerges, and 40 min later it possesses an ultrastructural organization with a typical two-layer wall and four well-defined zones: the apical, sub-apical, nuclear and vacuolar zones. In this period the material transported by the Golgi vesicles seems to be mostly incorporated into the pollen-tube wall (PTW). Stereological analysis showed that the increase in tube volume is correlated with the increase in the vacuolar compartment at the PG level. The decrease in the relative volume occupied by the mitochondria, generative cell and vegetative nucleus in the PG suggests that these organelles move to the PT. A correlation between the disappearance of lipid droplets in the lag phase and the metabolic reactions that take place during hydration is suggested.
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    European biophysics journal 21 (1993), S. 403-408 
    ISSN: 1432-1017
    Keywords: Anion channel ; Guard cell ; Stilbene derivatives ; Voltage dependence ; Gating ; Kinetics
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Physics
    Notes: Abstract An anion channel in the plasma membrane of guard cells (GCAC1) provides a regulatory element for the voltage-dependent release of anions during stomatal closure (Keller et al. 1989) as well as excitability (Hedrich et al. 1990). Recognition sites for plant growth hormones on the extracellular surface of GCAC1 further indicate that this channel may also serve as a transduction element in hormone signaling (Marten et al. 1991 a). Stilbene derivatives were used to study the inhibitor-structure channel-function relationship of GCAC1. We have analyzed the activity, voltage-gate and kinetics of this channel as affected by stilbenes. The stilbene derivatives SITS and DNDS caused a shift in activation potential and a decrease in the peak current amplitude. Channel block through the action of DIDS, on the other hand, was not accompanied by a shift in voltage-dependence. Differences in the dose-dependence of the two effects give clues to the presence of channel sites responsible for gate-shifting and block. The ability to inhibit anion currents (Kd) increased in the sequence: SITS (4 µM) 〈 DNDS (0.5 µM) 〈 DIDS (0.2 µM). All inhibitors reversibly blocked the anion channel from the extracellular side. Channel block on the level of single anion-channels is characterized by a reduction of long open-transitions into flickering bursts and a decrease in channel amplitude.
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    European biophysics journal 8 (1981), S. 23-34 
    ISSN: 1432-1017
    Keywords: Light-scattering ; Flash photometry ; Kinetics ; Visual transduction ; Biomembranes
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    Topics: Biology , Physics
    Notes: Abstract A recent development of kinetic light-scattering and -absorption photometry is described. Essential points are: 1) In the scattering experiment, amplitude resolution of 2 · 10−5 (single flash) by application of a differential detector, stability of the same magnitude due to optical compensation, high intensity at the detector due to special optics for the scattered light and semiconductor sources. 2) In the absorption measurement, elimination of scattering contributions by the dual wavelength-method and by high aperture optics. 3) Simultaneous measurement of absorption and scattering. The application of the method is described in using signals from isolated bovine rod outer segments. A reliable procedure is described by the use of which the originally measured light-scattering effects can be split up into single signals. The method allows comparative kinetic analysis of absorption and scattering signals. The possible causal connections between pigment and membrane structure processes can be selected.
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  • 42
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    European biophysics journal 9 (1983), S. 145-170 
    ISSN: 1432-1017
    Keywords: Viroids ; Thermodynamics ; Kinetics ; Hydrodynamics ; Function
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    Topics: Biology , Physics
    Notes: Abstract Viroids are an independent class of plant pathogens which are distinguished from viruses by the absence of a protein coat and by their unusually small size. They are single-stranded circular RNAs composed of about 360 nucleotide residues. Sequence analysis and physicochemical studies of the potato spindle tuber viroid (PSTV) have shown that, as a result of intra-molecular base pairing, viroids form a unique rod-like secondary structure which is characterized by a serial arrangement of double-helical sections and internal loops. There is no indication for an additional tertiary structure because all parts of the molecule are freely accessible to ligand interaction. During the denaturation all of the native base pairs of viroids are dissociated in one highly cooperative transition, and in the same process very stable hairpins which are not present in the native structure are newly formed. Most of the properties of the structure and structural transitions of PSTV have been found also in citrus exocortis viroid, chrysanthemum stunt viroid and four different viroid-like RNAs associated with the cadang-cadang disease. The close similarity between these viroids is more expressed in the overall structure and in thermodynamic and functional domains than in the primary sequence. The stiffness of all viroids can be described by an unique persistence length of 300 å. Characteristically, regions of premelting, regions of stable hairpins, and the sequence UACUACCCGGUGG which is opposite to one of the stable hairpins, are the most conservative sequences in the molecules. Current hypotheses about the function of viroids are discussed on the basis of their structural and thermodynamic features. The suggestion that viroid RNA has features similar to DNA has been supported by the finding that they are replicated in vitro by the DNA-dependent RNA polymerase II of the host plant. The highly conserved sequence in viroids mentioned above corresponds very closely to a segment at the 5′-end of the small nuclear RNA U1 of eukaryotes. Because this segment is discussed in recent models, to be involved in the splicing process, a hypothesis is proposed in which viroids interfere with the splicing process leading to a pathogenic misregulation of mRNA processing.
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    European biophysics journal 18 (1990), S. 121-128 
    ISSN: 1432-1017
    Keywords: Sodium current ; Potassium current ; Voltage-clamp ; Squid axons ; Kinetics
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    Topics: Biology , Physics
    Notes: Abstract Activation kinetics of the sodium and potassium conductances were re-examined in fresh axons of Loligo forbesi exhibiting very little if any potassium accumulation and a very small leak conductance, special attention being paid to the initial lag phase which precedes the turning-on of the conductances. The axons were kept intact and voltage-clamped at 2–3°C. In all cases, the rising phase of the currents could be fitted with very good accuracy using the Hodgkin-Huxley (1952) equations although, in most cases, the turning-on of the conductance did not coincide with the beginning of the depolarizing test pulse. The delay which separates the change in potential and the turning-on of current (the activation delay) was analyzed quantitatively for different prepulse and pulse potentials. The measured activation delay differed significantly from the delay predicted by the original HH equations. This difference (the ‘non-HH delay’) varied with prepulse and pulse potentials. For the potassium current, the relationship between the non-HH delay and pulse potential for a constant prepulse was bell shaped, the maximum value (0.7 ms for a prepulse to −80 mV) being reached for about 0 mV For this same current, the relationship between the non-HH delay and the prepulse potential for a constant pulse potential was sigmoidal, starting from a minimum value of around 0.5 ms at −100 mV and rising to 5 ms at −15 mV Essentially similar results were obtained for the sodium current although the non-HH delay was three to five times smaller and the dependency upon prepulse potential not significant. These results are in agreement with previous observations on squid axons and frog nodes of Ranvier and suggest that the opening of an ionic channel is preceded by a short but essential voltage-dependent conformational change of the channel protein.
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  • 44
    ISSN: 1432-072X
    Keywords: Methanosarcina thermophila ; Acetate ; Hydrogen ; Kinetics ; K m ; V max
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    Topics: Biology
    Notes: Abstract Methanosarcina thermophila TM-1 produced hydrogen during growth on acetate, maintaining a concentration of approx. 0.3 μM in the culture, corresponding to a hydrogen partial pressure of approx. 40 Pa. Increasing the partial pressure of hydrogen to 250 Pa and more led to a gradually increasing inhibition of acetate metabolism. No growth was observed when the gas phase contained 2000 Pa or more and acetate metabolism did not occur even after prolonged incubation (more than 2 weeks). M. thermophila was capable of limited consumption of hydrogen. Consumption of low concentrations of hydrogen proceeded simultaneously with acetate utilization. The affinity for hydrogen (K m=5 μM) was within the range normally found for hydrogenutilizing methanogens, while the corresponding V max (1.2 μmol hydrogen consumed mg-1 · cells h-1) was orders of magnitude lower.
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    Archives of microbiology 160 (1993), S. 288-294 
    ISSN: 1432-072X
    Keywords: Cellulase ; Cellulose ; Continuous culture ; Fibrobacter ; Growth yields ; Kinetics ; Rumen
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    Topics: Biology
    Notes: Abstract The ruminal cellulolytic bacterium Fibrobacter succinogenes S85 was grown in cellulose-fed continuous culture at 22 different combinations of dilution rate (D, 0.014–0.076 h-1) and extracellular pH (6.11–6.84). Effects of pH and D on the fermentation were determined by subjecting data on cellulose consumption, cell yield, product yield (succinate, acetate, formate), and soluble sugar concentrationto response surface analysis. The extent of cellulose conversion decreased with increasing D. First-order rate constants at rapid growth rates were estimated as 0.07–0.11 h-1, and decreased with decreasing pH. Apparent decreases in the rate constant with increasing D was not due to inadequate mixing or preferential utilization of the more amorphous regions of the cellulose. Significant quantities of soluble sugars (0.04–0.18 g/l, primarily glucose) were detected in all cultures, suggesting that glucose uptake was rather inefficient. Cell yields (0.11–0.24 g cells/g cellulose consumed) increased with increasing D. Pirt plots of the predicted yield data were used to determined that maintenance coefficient (0.04–0.06 g cellulose/g cells · h) and true growth yield (0.23–0.25 g cells/g cellulose consumed) varied slightly with pH. Yields of succinate, the major fermentation endproduct, were as high as 1.15 mol/mol anhydroglucose fermented, and were slightly affected by dilution rate but were not affected by pH. Comparison of the fermentation data with that of other ruminal cellulolytic bacteria indicates that F. succinogenes S85 is capable of rapid hydrolysis of crystalline cellulose and efficient growth, despite a lower μmax on microcrystalline cellulose.
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  • 46
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    Archives of microbiology 139 (1984), S. 28-32 
    ISSN: 1432-072X
    Keywords: Cyanobacterium ; Phosphate ; Uptake ; Kinetics ; Regulation ; Pulse ; Steady state
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    Topics: Biology
    Notes: Abstract In order to study phosphate uptake kinetics the cyanobacteriumOscillatoria agardhii was grown in continuous culture under a phosphorus limitation. The affinity of the uptake system reflected in the initial slope of the uptake rate versus external substrate concentration curve (dV/ds) was found to be unaffected by the growth wate. The maximum phosphate uptake rate (V m ) decreased as the growth rate was increased. Attempts were made to relate the decrease ofV m to the increase in phosphorus content of the cells that occurred a higher growth rates. Accumulation of phosphate during pulse experiments indeed resulted in a decrease ofV m . However feedback regulation ofV m by accumulated phosphorus was found to occur only to a small extent in steady state growing cells. The main part of the regulation of the activity of the phosphate uptake system seemingly is determined by a long term process that is, at least longer than 2 h. The presence of short term feedback inhibition by accumulated phosphorus on the activity of the uptake system provides an explanation of the phenomenon thatOscillatoria agardhii is not able to grow at nearμ max growth rates under a phosphorus limitation.
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  • 47
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    Transport in porous media 6 (1991), S. 703-737 
    ISSN: 1573-1634
    Keywords: Kinetics ; Diffusion Shrinking core ; Exposure ; Scaling
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    Topics: Geosciences , Technology
    Notes: Abstract Non-equilibrium between the composition of the soil solution and of the sorption sites on the solid matrix of soil may be due to mass transfer resistances and to slow chemical kinetics of elementary or complex reactions. Different mechanistic models have been used to describe the rate of change of the soil solution composition due to sorption, using a good description of experimental results to draw conclusions with respect to the mechanisms involved. Assuming a mono-solute description to be appropriate, some similarities and differences between overall first order kinetics and two mechanistic diffusion-sorption kinetics models are considered. Empirical first order reaction rates can often be fitted well within experimental error on the solutions for the mechanistic diffusion-sorption models. For one of the mechanistic models (unreacted shrinking core) the behaviour is shown when the reactive solid particle size is exponentially distributed. This model can be recast into a semi-empirical model that allows scaling of reaction time, as its concentration dependence differs from the two other models. This is illustrated with an example taken from metallurgical engineering. Another difference is the effect of nonequilibrium on the solute front in an ideal plug flow reactor. For sorption according to the shrinking core model displacement may lead to a non-Fickian front, as front spreading does not grow with the square root of time. For the two other sorption models Fickian type of displacement results for large enough displacement distances.
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  • 48
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    Journal of biomolecular NMR 2 (1992), S. 173-181 
    ISSN: 1573-5001
    Keywords: Amide proton ; Exchange rate ; Kinetics ; NOE ; Cross-relaxation
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    Topics: Biology , Chemistry and Pharmacology
    Notes: Summary A model is proposed to evaluate the rate of exchange between the amide protons of proteins and the solvent water molecules. Using this model we determined the extent of the error for the chemical exchange rate constant when cross relaxation was neglected; both selective inversion and saturation-transfer techniques were evaluated. Furthermore, the fluctuations in the NOE intensities were determined when the exchange rate was varied.
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  • 49
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    The journal of membrane biology 142 (1994), S. 161-170 
    ISSN: 1432-1424
    Keywords: Na+/glucose cotransporter ; Xenopus oocytes ; Phenylglucosides ; Voltage clamp ; Kinetics ; Molecular modeling
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Abstract Phenylglucosides are transported by the intestinal Na+/glucose cotransporter (SGLT1) and phlorizin, the classical competitive inhibitor of SGLT1, is also a phenylglucoside. To investigate the structural requirements for binding of substrates to SGLT1, we have studied the interactions between phenylglucosides and the cotransporter expressed in Xenopus oocytes using tracer uptake and electrophysiological methods. Some phenylglucosides inhibited the Na+-dependent uptake of 14C-α-methyl-d-glucopyranoside (αMDG) with apparent K is in the range 0.1 to 20 mm, while others had no effect. Electrophysiological experiments indicated that phenylglucosides can act either as: (1) transported substrates, e.g., arbutin; (2) nontransported inhibitors, e.g., glucosylphenyl-isothiocyanate; or (3) noninteracting sugars, e.g., salicin. The transported substrates (glucose, arbutin, phenylglucoside and helicin) induced different maximal currents, and computer simulations showed that this may be explained by a difference in the translocation rates of the sugar and Na+-loaded transporter. Computational chemistry indicated that all these β-phenylglucosides have similar 3-D structures. Analysis showed that among the side chains in the para position of the phenyl ring the -OH group (arbutin) facilitates transport, but the-NCS (glucosylphenyl-isothiocyanate) inhibits transport. In the ortho position, -CH2OH (salicin) prevents interaction, but the aldehyde (helicin) permits the molecule to be transported. Studies such as these may help to understand the geometry and nature of glucoside binding to SGLT1.
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  • 50
    ISSN: 1432-1424
    Keywords: Cell-attached patch-clamp technique ; (single) Cl− channel activity ; Voltage dependence ; Action potential ; Chara ; Kinetics
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    Topics: Biology , Chemistry and Pharmacology
    Notes: Abstract The plasma membrane of Chara corallina was made accessible for patch pipettes by cutting a small window through the cell wall of plasmolyzed internodal cells. With pipettes containing Cl− as Ca2+ or Ba2+ (50 or 100 mm), but not as Mg2+ or K+ salt, it was possible to record in the cell-attached mode for long periods with little channel activity, randomly interspersed with intervals of transient activation of two Cl− channel types (cord conductance at +50 mV: 52 and 16 pS, respectively). During these periods of transient channel activity, variable numbers (up to some 10) of the two Cl− channel types activated and again inactivated over several 100 msec in a coordinated fashion. Transient Cl channel activity was favored by voltages positive of the free running membrane voltage (〉 −45 mV); but positive voltage alone was neither a sufficient nor a necessary condition for activtion of these channels. Neither type of Cl− channel was markedly voltage dependent. A third, nonselective 4 pS channel is a candidate for Ca2+ translocation. The activity of this channel does not correlate in time with the transient activity of the Cl− channels. The entire set of results is consistent with the following microscopic mechanism of action potentials in Chara, concerning the role of Ca2+ and Cl− for triggering and time course: Ca2+ uptake does not activate Cl− channels directly but first supplies a membrane-associated population of Ca2+ storage sites. Depolarization enhances discharge of Ca2+ from these elements (none or few under the patch pipette) resulting in a local and transient increase of free Ca2+ concentration ([Ca2+]cyt) at the inner side of the membrane before being scavenged by the cytoplasmic Ca2+ buffer system. In turn, the transient rise in [Ca2+]cyt causes the transient activity of those Cl− channels, which are more likely to open at an elevated Ca2+ concentration.
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    Annals of biomedical engineering 20 (1992), S. 517-531 
    ISSN: 1573-9686
    Keywords: Ion channel ; Kinetics ; Nonlinear dynamics ; Chaos ; Mathematical model
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    Topics: Medicine , Technology
    Notes: Abstract Models of the gating of ion channels have usually assumed that the switching between the open and closed states is a random process without a mechanistic basis. We explored the properties of a deterministic model of channel gating based on a chaotic dynamic system. The channel is modeled as a nonlinear oscillator, that has a potential function with two minima, which correspond to the stable open and closed states, and is driven by a periodic driving force. The properties of the model are like some properties of single channel data and unlike other properties. The model is like the data in that: the current switches between two well-defined states, this switching is nonperiodic, and there are subconductance states. These subconductance states are subharmonic resonances, due to the nonlinearities in the equation of the model, rather than stable conformational states due to local minima in the potential energy. The model is not like the data in that the current fluctuates too much within in each state and there are sometimes periodic fluctuations within a state. At the present time, the selection of the most appropriate channel model (Markov, chaotic, or other) is not possible, and in addition to chaotic models, other nonlinear models may be suitable.
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  • 52
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    Plant and soil 54 (1980), S. 359-381 
    ISSN: 1573-5036
    Keywords: Alaska ; Ammonium ; Birch ; Forest-floor ; Isotopedilution ; Kinetics ; Nitrate ; Nitrogen pool
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Summary An analysis was conducted of nitrogen dynamics in the forest floor of a paper birch forest in subarctic Alaska. Low addition levels of high enrichment isotope (〈1% of the total nitrogen pool with 95 to 99 atom percent excess15N) and isotope dilution analysis, were used to establish the kinetics of nitrogen flow. The pools examined were NH4, NO3+NO2, soluble organic-N and forest floor organic matter. This approach allows a more realistic assessment of rates of N movement at the levels of nitrogen concentration encountered in natural systems.
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    Plant and soil 54 (1980), S. 399-417 
    ISSN: 1573-5036
    Keywords: Adsorption ; Anodic stripping voltammetry (ASV) ; Kinetics ; Lead ; River-mud
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Summary The effects of several factors on the rate and the capacity of lead adsorption by river-mud were studies. These factors included the concentration of mud, the concentration of lead, the organic matter content of mud, pH, time of adsorption, temperature and agitation. The reaction order of the adsorption process with respect to lead and the type of adsorption were determined. Also, indications of the rate-limiting step were discussed and an empirical equation describing the adsorption of lead on river-mud was developed.
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  • 54
    ISSN: 1573-5036
    Keywords: Ammonification ; Cadmium ; Heavy metals ; Kinetics ; Lead ; Nitrification ; Perfusion incubations ; Polluted soils ; Selection ; Toxicity ; Zinc
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Summary The sensitivity of the mineralization of nitrogen by a range of soils contaminated with heavy metals (up to 340 μg Cd g−1, 7500 μg Pb g−1 and 34000 μg Zn g−1) to the addition of heavy metals in solution were studied using pot incubations (ammonification) and a soil perfusion technique (nitrification). The ammonification of peptone showed little correlation between treatments with Cd, Zn (1000 and 5000 μg g−1) and Pb (10000 and 20000 μg g−1) and origin of the soil. Nitrification was considerably more sensitive to heavy metals than ammonification. All the soils had active, often large, populations of ammonifying and nitrifying organisms which showed substantial similarities between the soils. The rate of nitrifying activity (NO3−N production) was logrithmic in most cases. The presence of tolerant populations of nitrifying organisms in the contaminated soils was demonstrated. Tolerance was also eventually acquired after a longer lag phase, by the non-contaminated soil populations although the rate of activity was often reduced. Metals added in solution were adsorbed by the soil within 4 hours. Differences in toxicity between metal salts (chlorides, sulphates and acetate) were attributed to the amount left in solution. However, in many instances, acetate was found to stimulate all the stages in the mineralisation of nitrogen.
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  • 55
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    Journal of statistical physics 30 (1983), S. 219-241 
    ISSN: 1572-9613
    Keywords: Kinetics ; phase transitions ; nucleation ; lattice gas ; Becker-Doring equations ; clusters
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    Topics: Physics
    Notes: Abstract A method is described for calculating from first principles the coefficients in the Becker-Döring equations for the rate of change of the distribution of cluster sizes in a low-density lattice gas with Kawasaki dynamics. The method depends on solving a diffusion problem for the concentration of particles near a given cluster. The coefficients are calculated for cluster sizes up to 6, on a simple cubic lattice at a temperature 0.59 times the critical temperatures, and extrapolated to larger sizes. The resulting version of the Becker-Doring equations is then solved numerically. Comparison with the results of a computer simulation (at overall concentration 0.075) carried out by Kalos and others indicates that the method gives quite good predictions of the dependence of the cluster distribution on the critical cluster size (usually denoted by l*) but that the predicted rate of change of critical cluster size with time is too small, at this overall concentration, by a factor of about 0.3.
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  • 56
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    Journal of statistical physics 34 (1984), S. 399-426 
    ISSN: 1572-9613
    Keywords: Kinetics ; Becker-Doring equations ; clusters ; computer simulation
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    Topics: Physics
    Notes: Abstract We make a quantitative comparison between the predictions of the Becker-Döring equations and computer simulations on a model of a quenched binary A-B alloy. The atoms are confined to the vertices of a simple cubic lattice, interact through attractive nearest neighbor interactions, and move by interchanges of nearest neighbor pairs (Kawasaki dynamics). We study in particular the time evolution of the number of clusters of A atoms of each size, at four different concentrations: ρA=0.035, 0.05, 0.075, and 0.1 atoms per lattice site. The temperature is 0.59 times the critical temperature. At this temperature the equilibrium concentration of A atoms in the B-rich phase is ρ A eq =0.0145 atoms/lattice site. The coefficients entering the Becker-Döring equations are obtained by extrapolation from previously published low-density calculations, leaving the time scale as the only adjustable parameter. We find good agreement at the three lower densities. At 10% density the agreement is, as might be expected, less satisfactory but still fairly good-indicating a quite wide range of utility for the Becker-Döring equations.
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  • 57
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    Journal of comparative physiology 161 (1991), S. 635-646 
    ISSN: 1432-136X
    Keywords: Gills ; Ions ; Acid-base ; Kinetics ; Intracellular pH ; Trout ; Oncorhynchus mykiss
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Summary The novel application of a two-substrate model (Florini and Vestling 1957) from enzymology to transport kinetics at the gills of freshwater trout indicated that Na+/acidic equivalent and Cl-/basic equivalent flux rates are normally limited by the availability of the internal acidic and basic counterions, as well as by external Na+ and Cl- levels. Adult rainbow trout fitted with dorsal aortic and bladder catheters were chronically infused (10–16 h) with isosmotic HCl to induce a persistent metabolic acidosis. Acid-base neutral infusions of isosmotic NaCl and non-infused controls were also performed. Results were compared to previous data on metabolic alkalosis in trout induced by either isosmotic NaHCO3 infusion or recovery from environmental hyperoxia (Goss and Wood 1990a, b). Metabolic acidosis resulted in a marked stimulation of Na+ influx, no change in Cl- influx, positive Na+ balance, negative Cl- balance, and net H+ excretion at the gills. Metabolic alkalosis caused a marked inhibition of Na+ influx and stimulation of Cl- influx, negative Na+ balance, positive Cl- balance, and net H+ uptake (=base excretion). Mean gill intracellular pH qualitatively followed extracellular pH. Classical one-substrate Michaelis-Menten analysis of kinetic data indicated that changes in Na+ and Cl- transport during acid-base disturbance are achieved by large increases and decreases in Jmax, and by increases in Km. However, one-substrate analysis considers only external substrate concentration and cannot account for transport limitations by the internal substrate. The kinetic data were fitted successfully to a two-substrate model, using extracellular acid-base data as a measure of internal HCO 3 - and H+ availability. This analysis indicated that true Jmax values for Na+/acidic equivalent and Cl-/basic equivalent transport are 4–5 times higher than apparent Jmax values by one-substrate analysis. Flux rates are limited by the availability of the internal counterions; transport Km values for HCO 3 - and H+ are far above their normal internal concentrations. Therefore, small changes in acid-base status will have large effects on transport rates, and on apparent Jmax values, without alterations in the number of transport sites. This system provides an automatic, negative feedback control for clearance or retention of acidic/basic equivalents when acid-base status is changing.
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    Chromatographia 36 (1993), S. 79-82 
    ISSN: 1612-1112
    Keywords: Column liquid chromatography ; Tinidazole ; Hydrolysis ; Kinetics
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    Topics: Chemistry and Pharmacology
    Notes: Summary The high-performance liquid chromatographic (HPLC) method herein described allows the simultaneous determination of the hydrolysis kinetics of tinidazole and the formation kinetics of the hydrolysis products. Tinidazole is easily hydrolysed under basic conditions at raised temperature. The rate varies with the pH and the temperature of the solution, and the decomposition follows apparent first-order kinetics. The Arrheinius equation can be used to describe the effect of temperature on the half-life.
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  • 59
    Publication Date: 1990-08-10
    Description: The stimulation of phospholipase A2 by thrombin and type 2 (P2)-purinergic receptor agonists in Chinese hamster ovary cells is mediated by the G protein Gi. To delineate alpha chain regulatory regions responsible for control of phospholipase A2, chimeric cDNAs were constructed in which different lengths of the alpha subunit of Gs (alpha s) were replaced with the corresponding sequence of the Gi alpha subunit (alpha i2). When a carboxyl-terminal chimera alpha s-i(38), which has the last 38 amino acids of alpha s substituted with the last 36 residues of alpha i2, was expressed in Chinese hamster ovary cells, the receptor-stimulated phospholipase A2 activity was inhibited, although the chimera could still activate adenylyl cyclase. Thus, alpha s-i(38) is an active alpha s, but also a dominant negative alpha i molecule, indicating that the last 36 amino acids of alpha i2 are a critical domain for G protein regulation of phospholipase A2 activity.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Gupta, S K -- Diez, E -- Heasley, L E -- Osawa, S -- Johnson, G L -- DK37871/DK/NIDDK NIH HHS/ -- GM30324/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 1990 Aug 10;249(4969):662-6.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Division of Basic Sciences, National Jewish Center for Immunology and Respiratory Medicine, Denver, CO 80206.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2166341" target="_blank"〉PubMed〈/a〉
    Keywords: Adenosine Triphosphate/pharmacology ; Animals ; Arachidonic Acid ; Arachidonic Acids/metabolism ; Cell Line ; Chlorides/pharmacology ; Enzyme Activation ; GTP-Binding Proteins/*genetics/metabolism ; Inositol Phosphates/metabolism ; Kinetics ; Lithium/pharmacology ; Lithium Chloride ; Macromolecular Substances ; *Mutation ; Phospholipases/*metabolism ; Phospholipases A/*metabolism ; Phospholipases A2 ; Receptors, Purinergic/drug effects/*physiology ; Restriction Mapping ; Thrombin/antagonists & inhibitors/*pharmacology ; Transfection
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  • 60
    Publication Date: 1990-08-17
    Description: The transcription factor C/EBP uses a bipartite structural motif to bind DNA. Two protein chains dimerize through a set of amphipathic alpha helices termed the leucine zipper. Highly basic polypeptide regions emerge from the zipper to form a linked set of DNA contact surfaces. In the recently proposed a "scissors grip" model, the paired set of basic regions begin DNA contact at a central point and track in opposite directions along the major groove, forming a molecular clamp around DNA. This model predicts that C/EBP must undertake significant changes in protein conformation as it binds and releases DNA. The basic region of ligand-free C/EBP is highly sensitive to protease digestion. Pronounced resistance to proteolysis occurred when C/EBP associated with its specific DNA substrate. Sequencing of discrete proteolytic fragments showed that prominent sites for proteolysis occur at two junction points predicted by the "scissors grip" model. One junction corresponds to the cleft where the basic regions emerge from the leucine zipper. The other corresponds to a localized nonhelical segment that has been hypothesized to contain an N-cap and facilitate the sharp angulation necessary for the basic region to track continuously in the major groove of DNA.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Shuman, J D -- Vinson, C R -- McKnight, S L -- New York, N.Y. -- Science. 1990 Aug 17;249(4970):771-4.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Howard Hughes Research Laboratories, Department of Embryology, Baltimore, MD 21210.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2202050" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Binding Sites ; CCAAT-Enhancer-Binding Proteins ; Chromatography, High Pressure Liquid ; DNA/*metabolism ; DNA-Binding Proteins/metabolism ; Kinetics ; Leucine ; Macromolecular Substances ; Models, Molecular ; Molecular Sequence Data ; Nuclear Proteins/*metabolism ; Peptide Fragments/metabolism ; Peptide Hydrolases/*metabolism ; Protein Conformation ; Transcription Factors/*metabolism ; Trypsin/metabolism
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  • 61
    Publication Date: 1990-10-12
    Description: The mechanism by which phytohormones, like abscisic acid (ABA), regulate gene expression is unknown. An activity in nuclear extracts that interacts with the ABA response element (ABRE) from the 5' regulatory region of the wheat Em gene was identified. A complementary DNA clone was isolated whose product is a DNA binding protein (EmBP-1) that interacts specifically with an 8-base pair (bp) sequence (CACGTGGC) in the ABRE. A 2-bp mutation in this sequence prevented binding of EmBP-1. The same mutation reduced the ability of the ABRE to confer ABA responsiveness on a viral promoter in a transient assay. The 8-bp EmBP-1 target sequence was found to be conserved in several other ABA-responsive promoters and in promoters from plants that respond to signals other than ABA. Similar sequences are found in promoters from mammals, yeast, and in the major late promoter of adenovirus. The deduced amino acid sequence of EmBP-1 contains conserved basic and leucine zipper domains found in transcription factors in plants, yeast, and mammals. EmBP-1 may be a member of a highly conserved family of proteins that recognize a core sequence found in the regulatory regions of various genes that are integrated into a number of different response pathways.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Guiltinan, M J -- Marcotte, W R Jr -- Quatrano, R S -- New York, N.Y. -- Science. 1990 Oct 12;250(4978):267-71.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biology, University of North Carolina, Chapel Hill 27599-3280.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2145628" target="_blank"〉PubMed〈/a〉
    Keywords: Abscisic Acid/*metabolism ; Amino Acid Sequence ; Base Sequence ; Cell Nucleus/metabolism ; DNA/*genetics ; DNA-Binding Proteins/genetics/metabolism ; *Gene Expression Regulation ; *Leucine Zippers/genetics ; Molecular Sequence Data ; Oligonucleotide Probes ; Plants/*genetics ; Sequence Homology, Nucleic Acid ; Triticum/*genetics/metabolism
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  • 62
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    Unknown
    American Association for the Advancement of Science (AAAS)
    Publication Date: 1990-02-02
    Description: The RNA moiety of the ribonucleoprotein enzyme telomerase from the ciliate Euplotes crassus was identified and its gene was sequenced. Functional analysis, in which oligonucleotides complementary to portions of the telomerase RNA were tested for their ability to prime telomerase in vitro, showed that the sequence 5' CAAAACCCCAAA 3' in this RNA is the template for synthesis of telomeric TTTTGGGG repeats by the Euplotes telomerase. The data provide a direct demonstration of a template function for a telomerase RNA and demarcate the outer boundaries of the telomeric template. Telomerase can now be defined as a specialized reverse transcriptase.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Shippen-Lentz, D -- Blackburn, E H -- New York, N.Y. -- Science. 1990 Feb 2;247(4942):546-52.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Molecular and Cell Biology, University of California, Berkeley 94720.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/1689074" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Base Sequence ; Ciliophora/enzymology/*genetics ; DNA Nucleotidylexotransferase/*genetics ; Genes ; Molecular Sequence Data ; Oligonucleotide Probes ; RNA/*genetics ; Sequence Homology, Nucleic Acid ; *Templates, Genetic
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  • 63
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    Unknown
    American Association for the Advancement of Science (AAAS)
    Publication Date: 1990-04-06
    Description: The rate of release of guanine nucleotides from the ras proteins (Ras) is extremely slow in the presence of Mg2+. It seemed likely, therefore that a factor might exist to accelerate the release of guanosine diphosphate (GDP), and hence the exchange of GDP for guanosine triphosphate (GTP). Such a factor has now been discovered in rat brain cytosol. Brain cytosol was found to catalyze, by orders of magnitude, the release of guanine nucleotides from recombinant v-H-Ras protein bound with [alpha-32P]GDP. This effect occurred even in the presence of a large excess of Mg2+, but was destroyed by heat or by incubation of the cytosol for an hour at 37 degrees C in the absence of phosphatase inhibitors. The effect was observed with either v-H-Ras or c-H-Ras, but not with p25rab3A, a small G protein with about 30% similarity to Ras. The effect could not be mimicked by addition of recombinant Ras-GAP or purified GEF, a guanine nucleotide exchange factor involved in the regulation of eukaryotic protein synthesis. By gel filtration chromatography, the factor appears to possess a molecular size between 100,000 and 160,000 daltons. This protein (Ras-guanine nucleotide-releasing factor, or Ras-GRF) may be involved in the activation of p21ras.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Wolfman, A -- Macara, I G -- CA 43551/CA/NCI NIH HHS/ -- ES 01247/ES/NIEHS NIH HHS/ -- GM 41220/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 1990 Apr 6;248(4951):67-9.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biophysics, University of Rochester Medical Center, NY 14642.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2181667" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Binding, Competitive ; Brain/metabolism ; Cholic Acids ; Cytosol/*metabolism ; Guanine Nucleotides/*metabolism ; Guanosine 5'-O-(3-Thiotriphosphate) ; Guanosine Diphosphate/*metabolism ; Guanosine Triphosphate/analogs & derivatives/metabolism ; Hot Temperature ; Immunosorbent Techniques ; Kinetics ; Magnesium Chloride/pharmacology ; Molecular Weight ; Proto-Oncogene Proteins/*metabolism ; Proto-Oncogene Proteins p21(ras) ; Rats ; Thionucleotides/metabolism
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  • 64
    Publication Date: 1990-07-06
    Description: Oligonucleotides equipped with EDTA-Fe can bind specifically to duplex DNA by triple-helix formation and produce double-strand cleavage at binding sites greater than 12 base pairs in size. To demonstrate that oligonucleotide-directed triple-helix formation is a viable chemical approach for the site-specific cleavage of large genomic DNA, an oligonucleotide with EDTA-Fe at the 5' and 3' ends was targeted to a 20-base pair sequence in the 340-kilobase pair chromosome III of Saccharomyces cerevisiae. Double-strand cleavage products of the correct size and location were observed, indicating that the oligonucleotide bound and cleaved the target site among almost 14 megabase pairs of DNA. Because oligonucleotide-directed triple-helix formation has the potential to be a general solution for DNA recognition, this result has implications for physical mapping of chromosomes.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Strobel, S A -- Dervan, P B -- GM 42966/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 1990 Jul 6;249(4964):73-5.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Arnold and Mabel Beckman Laboratories of Chemical Synthesis, Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena 91125.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2195655" target="_blank"〉PubMed〈/a〉
    Keywords: Base Sequence ; Binding Sites ; Chromosomes, Fungal/*metabolism ; DNA, Fungal/*genetics/metabolism ; Densitometry ; Hydrogen-Ion Concentration ; Molecular Sequence Data ; Nucleic Acid Conformation ; Nucleic Acid Hybridization ; Oligonucleotides/*genetics/metabolism ; Saccharomyces cerevisiae/*genetics
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  • 65
    Publication Date: 1990-08-31
    Description: The protein encoded by the wild-type p53 proto-oncogene has been shown to suppress transformation, whereas certain mutations that alter p53 become transformation competent. Fusion proteins between p53 and the GAL4 DNA binding domain were made to anchor p53 to a DNA target sequence and to allow measurement of transcriptional activation of a reporter plasmid. The wild-type p53 stimulated transcription in this assay, but two transforming mutations in p53 were unable to act as transcriptional activators. Therefore, p53 can activate transcription, and transformation-activating mutations result in a loss of function of the p53 protein. The inability of the p53 mutant proteins to activate transcription may enable them to be transformation competent.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2935288/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2935288/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Raycroft, L -- Wu, H Y -- Lozano, G -- CA16672/CA/NCI NIH HHS/ -- CA47296/CA/NCI NIH HHS/ -- R01 CA047296/CA/NCI NIH HHS/ -- R01 CA047296-12/CA/NCI NIH HHS/ -- New York, N.Y. -- Science. 1990 Aug 31;249(4972):1049-51.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉University of Texas, M. D. Anderson Cancer Center, Department of Molecular Genetics, Houston 77030.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2144364" target="_blank"〉PubMed〈/a〉
    Keywords: Base Sequence ; *Cell Transformation, Neoplastic ; *Gene Expression Regulation ; HeLa Cells/metabolism ; Humans ; Molecular Sequence Data ; *Mutation ; Nuclear Proteins/genetics ; Oligonucleotide Probes ; Oncogene Proteins/*genetics ; Phosphoproteins/*genetics ; *Proto-Oncogenes ; RNA, Messenger/genetics ; Suppression, Genetic ; Transcription Factors/*genetics ; *Transcription, Genetic ; Tumor Suppressor Protein p53
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  • 66
    Publication Date: 1990-01-12
    Description: The murine white spotting locus (W) is allelic with the proto-oncogene c-kit, which encodes a transmembrane tyrosine protein kinase receptor for an unknown ligand. Mutations at the W locus affect various aspects of hematopoiesis and the proliferation and migration of primordial germ cells and melanoblasts during development to varying degrees of severity. The W42 mutation has a particularly severe effect in both the homozygous and the heterozygous states. The molecular basis of the W42 mutation was determined. The c-kit protein products in homozygous mutant mast cells were expressed normally but displayed a defective tyrosine kinase activity in vitro. Nucleotide sequence analysis of mutant complementary DNAs revealed a missense mutation that replaces aspartic acid with asparagine at position 790 in the c-kit protein product. Aspartic acid-790 is a conserved residue in all protein kinases. These results provide an explanation for the dominant nature of the W42 mutation and provide insight into the mechanism of c-kit-mediated signal transduction.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Tan, J C -- Nocka, K -- Ray, P -- Traktman, P -- Besmer, P -- P01-CA-16599/CA/NCI NIH HHS/ -- R01-CA-32926/CA/NCI NIH HHS/ -- New York, N.Y. -- Science. 1990 Jan 12;247(4939):209-12.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Molecular Biology Program, Sloan Kettering Institute, New York, NY 10021.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/1688471" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Animals ; Base Sequence ; Cells, Cultured ; DNA/genetics ; Gene Expression ; Homozygote ; Liver/analysis/cytology/embryology ; Mast Cells/metabolism ; Mice ; Molecular Sequence Data ; *Mutation ; *Phenotype ; Polymerase Chain Reaction ; Protein-Tyrosine Kinases/*genetics ; Proto-Oncogene Proteins/*genetics ; Proto-Oncogene Proteins c-kit ; RNA/analysis ; Receptors, Cell Surface/genetics ; Signal Transduction
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  • 67
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    Unknown
    American Association for the Advancement of Science (AAAS)
    Publication Date: 1990-04-27
    Description: Light-dependent expression of rbcS, the gene encoding the small subunit of ribulose-1,5-bisphosphate carboxylase, which is the key enzyme involved in carbon fixation in higher plants, is regulated at the transcriptional level. Sequence analysis of the gene has uncovered a conserved GT motif in the -150 to -100 region of many rbcS promoters. This motif serves as the binding site of a nuclear factor, designated GT-1. Analysis of site-specific mutants of pea rbcS-3A promoter demonstrated that GT-1 binding in vitro is correlated with light-responsive expression of the rbcS promoter in transgenic plants. However, it is not known whether factors other than GT-1 might also be required for activation of transcription by light. A synthetic tetramer of box II (TGTGTGGTTAATATG), the GT-1 binding site located between -152 to -138 of the rbcS-3A promoter, inserted upstream of a truncated cauliflower mosaic virus 35S promoter is sufficient to confer expression in leaves of transgenic tobacco. This expression occurs principally in chloroplast-containing cells, is induced by light, and is correlated with the ability of box II to bind GT-1 in vitro. The data show that the binding site for GT-1 is likely to be a part of the molecular light switch for rbcS activation.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Lam, E -- Chua, N H -- New York, N.Y. -- Science. 1990 Apr 27;248(4954):471-4.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Laboratory of Plant Molecular Biology, Rockefeller University, New York, NY 10021.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2330508" target="_blank"〉PubMed〈/a〉
    Keywords: Base Sequence ; Binding Sites ; Chloramphenicol O-Acetyltransferase/genetics ; Cloning, Molecular ; DNA-Binding Proteins/*metabolism ; Gene Expression Regulation/*physiology ; Genetic Vectors ; *Light ; Molecular Sequence Data ; Mutation ; Nuclear Proteins/*metabolism ; Plant Proteins/*metabolism ; *Plants, Toxic ; Promoter Regions, Genetic/genetics ; Ribulose-Bisphosphate Carboxylase/*genetics ; Tobacco/enzymology/*genetics ; Transcription, Genetic/radiation effects ; Transformation, Genetic
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  • 68
    Publication Date: 1990-08-24
    Description: The protein Felix was designed de novo to fold into an antiparallel four-helix bundle of specific topology. Its sequence of 79 amino acid residues is not homologous to any known protein sequence, but is "native-like" in that it is nonrepetitive and contains 19 of the 20 naturally occurring amino acids. Felix has been expressed from a synthetic gene cloned in Escherichia coli, and the protein has been purified to homogeneity. Physical characterization of the purified protein indicates that Felix (i) is monomeric in solution, (ii) is predominantly alpha-helical, (iii) contains a designed intramolecular disulfide bond linking the first and fourth helices, and (iv) buries its single tryptophan in an apolar environment and probably in close proximity with the disulfide bond. These physical properties rule out several alternative structures and indicate that Felix indeed folds into approximately the designed three-dimensional structure.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Hecht, M H -- Richardson, J S -- Richardson, D C -- Ogden, R C -- New York, N.Y. -- Science. 1990 Aug 24;249(4971):884-91.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biochemistry, Duke University, Durham, NC 27710.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2392678" target="_blank"〉PubMed〈/a〉
    Keywords: *Amino Acid Sequence ; Base Sequence ; DNA/genetics ; *Models, Chemical ; Models, Molecular ; Molecular Sequence Data ; *Protein Conformation ; Protein Denaturation ; *Proteins ; *Recombinant Proteins
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  • 69
    Publication Date: 1990-11-09
    Description: High sequence selectivity in DNA-protein interactions was analyzed by measuring discrimination by Eco RI endonuclease between the recognition site GAATTC and systematically altered DNA sites. Base analogue substitutions that preserve the sequence-dependent conformational motif of the GAATTC site permit deletion of single sites of protein-base contact at a cost of +1 to +2 kcal/mol. However, the introduction of any one incorrect natural base pair costs +6 to +13 kcal/mol in transition state interaction energy, the resultant of the following interdependent factors: deletion of one or two hydrogen bonds between the protein and a purine base; unfavourable steric apposition between a group on the protein and an incorrectly placed functional group on a base; disruption of a pyrimidine contact with the protein; loss of some crucial interactions between protein and DNA phosphates; and an increased energetic cost of attaining the required DNA conformation in the transition state complex. Eco RI endonuclease thus achieves stringent discrimination by both "direct readout" (protein-base contracts) and "indirect readout" (protein-phosphate contacts and DNA conformation) of the DNA sequence.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Lesser, D R -- Kurpiewski, M R -- Jen-Jacobson, L -- GM-29207/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 1990 Nov 9;250(4982):776-86.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biological Sciences, University of Pittsburgh, PA 15260.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2237428" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Base Sequence ; Binding Sites ; DNA/chemistry/genetics/*metabolism ; Deoxyribonuclease EcoRI/chemistry/*metabolism ; Energy Transfer ; Molecular Sequence Data ; Nucleic Acid Conformation ; Phosphates/metabolism ; Substrate Specificity
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  • 70
    Publication Date: 1990-05-11
    Description: Chronic granulomatous diseases (CGDs) are characterized by recurrent infections resulting from impaired superoxide production by a phagocytic cell, nicotinamide adenine dinucleotide phosphate (reduced) (NADPH) oxidase. Complementary DNAs were cloned that encode the 67-kilodalton (kD) cytosolic oxidase factor (p67), which is deficient in 5% of CGD patients. Recombinant p67 (r-p67) partially restored NADPH oxidase activity to p67-deficient neutrophil cytosol from these patients. The p67 cDNA encodes a 526-amino acid protein with acidic middle and carboxyl-terminal domains that are similar to a sequence motif found in the noncatalytic domain of src-related tyrosine kinases. This motif was recently noted in phospholipase C-gamma, nonerythroid alpha-spectrin (fodrin), p21ras-guanosine triphophatase-activating protein (GAP), myosin-1 isoforms, yeast proteins cdc-25 and fus-1, and the 47-kD phagocyte oxidase factor (p47), which suggests the possibility of common regulatory features.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Leto, T L -- Lomax, K J -- Volpp, B D -- Nunoi, H -- Sechler, J M -- Nauseef, W M -- Clark, R A -- Gallin, J I -- Malech, H L -- I01 BX000513/BX/BLRD VA/ -- New York, N.Y. -- Science. 1990 May 11;248(4956):727-30.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Laboratory of Clinical Investigation, National Institute of Allergy and Infectious Diseases, Bethesda, MD 20892.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/1692159" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Animals ; Base Sequence ; Cloning, Molecular ; Granulomatous Disease, Chronic/blood/enzymology/genetics ; Humans ; Molecular Sequence Data ; NADH, NADPH Oxidoreductases/blood/*genetics ; NADPH Oxidase ; Neutrophils/*enzymology ; Protein-Tyrosine Kinases/genetics ; Proto-Oncogene Proteins/*genetics ; Proto-Oncogene Proteins pp60(c-src) ; Sequence Homology, Nucleic Acid
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  • 71
    Publication Date: 1990-08-03
    Description: Phosphoenolpyruvate carboxykinase (PEPCK) governs the rate-limiting step in gluconeogenesis. Glucocorticoids and adenosine 3',5'-monophosphate (cAMP) increase PEPCK gene transcription and gluconeogenesis, whereas insulin has the opposite effect. Insulin is dominant, since it prevents cAMP and glucocorticoid-stimulated transcription. Glucocorticoid and cAMP response elements have been located in the PEPCK gene and now a 15-base pair insulin-responsive sequence (IRS) is described. Evidence for a binding activity that recognizes this sequence is presented.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉O'Brien, R M -- Lucas, P C -- Forest, C D -- Magnuson, M A -- Granner, D K -- DK 20593/DK/NIDDK NIH HHS/ -- DK 35107/DK/NIDDK NIH HHS/ -- New York, N.Y. -- Science. 1990 Aug 3;249(4968):533-7.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Molecular Physiology and Biophysics, Vanderbilt University Medical School, Nashville, TN 37232-0615.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2166335" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Base Sequence ; Cell Line ; Chloramphenicol O-Acetyltransferase/genetics/metabolism ; Cyclic AMP/analogs & derivatives/physiology ; Dexamethasone/pharmacology ; *Genes, Regulator ; Insulin/*pharmacology ; Molecular Sequence Data ; Phosphoenolpyruvate Carboxykinase (GTP)/*genetics/metabolism ; RNA, Messenger/drug effects/genetics ; Recombinant Fusion Proteins/metabolism ; Thionucleotides ; Transcription, Genetic/*drug effects ; Transfection
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  • 72
    Publication Date: 1990-11-30
    Description: Conducting gramicidin channels form predominantly by the transmembrane association of monomers, one from each side of a lipid bilayer. In single-channel experiments in planar bilayers the two gramicidin analogs, [Val1]gramicidin A (gA) and [4,4,4-F3-Val1]gramicidin A (F3gA), form dimeric channels that are structurally equivalent and have characteristically different conductances. When these gramicidins were added asymmetrically, one to each side of a preformed bilayer, the predominant channel type was the hybrid channel, formed between two chemically dissimilar monomers. These channels formed by the association of monomers residing in each half of the membrane. These results also indicate that the hydrophobic gramicidins are surprisingly membrane impermeant, a conclusion that was confirmed in experiments in which gA was added asymmetrically and symmetrically to preformed bilayers.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉O'Connell, A M -- Koeppe, R E 2nd -- Andersen, O S -- GM21342/GM/NIGMS NIH HHS/ -- GM34968/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 1990 Nov 30;250(4985):1256-9.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Physiology and Biophysics, Cornell University Medical College, New York, NY 10021.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/1700867" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Cell Membrane Permeability ; Chemistry, Physical ; Electric Conductivity ; Gramicidin/*chemistry/metabolism ; Ion Channels/*chemistry/physiology ; Kinetics ; Lipid Bilayers/*chemistry ; Macromolecular Substances ; Molecular Sequence Data ; Physicochemical Phenomena ; Protein Conformation
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  • 73
    Publication Date: 1990-06-22
    Description: The vast repertoire of immunoglobulins and T cell receptors is generated, in part, by V(D)J recombination, a series of genomic rearrangements that occur specifically in developing lymphocytes. The recombination activating gene, RAG-1, which is a gene expressed exclusively in maturing lymphoid cells, was previously isolated. RAG-1 inefficiently induced V(D)J recombinase activity when transfected into fibroblasts, but cotransfection with an adjacent gene, RAG-2, has resulted in at least a 1000-fold increase in the frequency of recombination. The 2.1-kilobase RAG-2 complementary DNA encodes a putative protein of 527 amino acids whose sequence is unrelated to that of RAG-1. Like RAG-1, RAG-2 is conserved between species that carry out V(D)J recombination, and its expression pattern correlates precisely with that of V(D)J recombinase activity. In addition to being located just 8 kilobases apart, these convergently transcribed genes are unusual in that most, if not all, of their coding and 3' untranslated sequences are contained in single exons. RAG-1 and RAG-2 might activate the expression of the V(D)J recombinase but, more likely, they directly participate in the recombination reaction.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Oettinger, M A -- Schatz, D G -- Gorka, C -- Baltimore, D -- GM39458/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 1990 Jun 22;248(4962):1517-23.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Whitehead Institute for Biomedical Research, Cambridge, MA 02142.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2360047" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Animals ; Base Sequence ; Biological Evolution ; Cattle ; Cell Line ; Chickens ; Cricetinae ; DNA/*genetics ; DNA Nucleotidyltransferases/*genetics ; *DNA-Binding Proteins ; Dogs ; Female ; *Gene Rearrangement, B-Lymphocyte ; *Gene Rearrangement, T-Lymphocyte ; *Homeodomain Proteins ; Humans ; Male ; Mice ; Molecular Sequence Data ; *Multigene Family ; Nuclear Proteins ; Nucleic Acid Hybridization ; Opossums ; Proteins/*genetics ; Rabbits ; Recombination, Genetic/*genetics ; Restriction Mapping ; Transfection ; Turtles ; VDJ Recombinases
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  • 74
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    Unknown
    American Association for the Advancement of Science (AAAS)
    Publication Date: 1990-08-17
    Description: A class of transcriptional regulator proteins bind to DNA at dyad-symmetric sites through a motif consisting of (i) a "leucine zipper" sequence that associates into noncovalent, parallel, alpha-helical dimers and (ii) a covalently connected basic region necessary for binding DNA. The basic regions are predicted to be disordered in the absence of DNA and to form alpha helices when bound to DNA. These helices bind in the major groove forming multiple hydrogen-bonded and van der Waals contacts with the nucleotide bases. To test this model, two peptides were designed that were identical to natural leucine zipper proteins only at positions hypothesized to be critical for dimerization and DNA recognition. The peptides form dimers that bind specifically to DNA with their basic regions in alpha-helical conformations.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉O'Neil, K T -- Hoess, R H -- DeGrado, W F -- New York, N.Y. -- Science. 1990 Aug 17;249(4970):774-8.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Central Research and Development Department, E.I. du Pont de Nemours & Co., Wilmington, DE 19880-0328.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2389143" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Base Sequence ; Binding Sites ; Chemistry, Physical ; Circular Dichroism ; Computer Simulation ; DNA/*metabolism ; DNA-Binding Proteins/*metabolism ; Hydrogen Bonding ; *Leucine ; Macromolecular Substances ; Models, Molecular ; Molecular Sequence Data ; Physicochemical Phenomena ; Protein Conformation
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  • 75
    Publication Date: 1990-09-21
    Description: Thyrotropin (TSH), luteinizing hormone (LH), and chorionic gonadotropin (CG) are structurally related glycoprotein hormones, which bind to receptors that share a high degree of sequence similarity. However, comparison of the primary amino acid sequences of the TSH and LH-CG receptors reveals two unique insertions of 8 and 50 amino acids in the extracellular domain of the TSH receptor. The functional significance of these insertions were determined by site-directed mutagenesis. Deletion of the 50-amino acid tract (residues 317 to 366) had no effect on TSH binding or on TSH and thyroid-stimulating immunoglobulin (TSI) biological activities. In contrast, either deletion or substitution of the eight-amino acid region (residues 38 to 45) abolished these activities. This eight-amino acid tract near the amino terminus of the TSH receptor appears to be an important site of interaction for both TSH and TSI.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Wadsworth, H L -- Chazenbalk, G D -- Nagayama, Y -- Russo, D -- Rapoport, B -- DK-19289/DK/NIDDK NIH HHS/ -- DK-36182/DK/NIDDK NIH HHS/ -- New York, N.Y. -- Science. 1990 Sep 21;249(4975):1423-5.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Medicine, Veterans Administration Medical Center, San Francisco, CA 94121.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2169649" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Base Sequence ; Binding Sites ; Cell Line ; Chromosome Deletion ; Clone Cells ; Cyclic AMP/metabolism ; Humans ; Molecular Sequence Data ; Mutation ; Oligonucleotide Probes ; Receptors, Thyrotropin/*genetics/metabolism ; Thyrotropin/*metabolism/pharmacology ; Transfection
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  • 76
    Publication Date: 1990-09-14
    Description: Fusion of the DNA-binding domain of yeast GAL4 protein to the amino terminus of bacteriophage T7 RNA polymerase yields a chimera that retains the characteristics of its components. The presence of the GAL4 peptide allows the chimeric enzyme to anchor itself on the DNA template, and this anchoring in turn drives the formation of a supercoiled DNA loop, in linear or circular templates, when RNA synthesis at the polymerase site forces a translocation of the DNA relative to the site. Nonspecific interaction between the chimeric enzyme and DNA appears to be sufficient to effect supercoiling during transcription. Transcription by the chimeric polymerase is strictly dependent on the presence of a T7 promoter; thus it provides a tool in vitro and in vivo for specifically supercoiling DNA segments containing T7 promoter sequences.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Ostrander, E A -- Benedetti, P -- Wang, J C -- GM24544/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 1990 Sep 14;249(4974):1261-5.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biochemistry and Molecular Biology, Harvard University, Cambridge, MA 02138.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2399463" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Base Sequence ; DNA, Superhelical/*metabolism ; DNA-Binding Proteins/*physiology ; DNA-Directed RNA Polymerases/*physiology ; Fungal Proteins/*metabolism ; Macromolecular Substances ; Molecular Sequence Data ; Promoter Regions, Genetic/physiology ; Recombinant Fusion Proteins/metabolism ; *Saccharomyces cerevisiae Proteins ; T-Phages/*enzymology ; Transcription Factors/physiology ; Transcription, Genetic/*physiology ; Viral Proteins
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  • 77
    Publication Date: 1990-09-28
    Description: The erbB2 oncogene encodes a 185-kilodalton transmembrane protein whose sequence is similar to the epidermal growth factor receptor (EGFR). A 30-kilodalton factor (gp30) secreted from MDA-MB-231 human breast cancer cells was shown to be a ligand for p185erbB2. An antibody to EGFR abolished the tyrosine phosphorylation induced by EGF and transforming growth factor-alpha (TGF-alpha) but only partially blocked that produced by gp30 in SK-BR-3 breast cancer cells. In two cell lines that overexpress erbB2 but do not expresss EGFR (MDA-MB-453 breast cancer cells and a Chinese hamster ovary cell line that had been transfected with erbB2), phosphorylation of p185erbB2 was induced only by gp30. The gp30 specifically inhibited the growth of cells that overexpressed p185erbB2. An antibody to EGFR had no effect on the inhibition of SK-BR-3 cell colony formation obtained with gp30. Thus, it appeared that gp30 interacted directly with the EGFR and erbB2. Direct binding of gp30 to p185erbB2 was confirmed by binding competition experiments, where gp30 was found to displace the p185erbB2 binding of a specific antibody to p185erbB2. The evidence described here suggests that gp30 is a ligand for p185erbB2.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Lupu, R -- Colomer, R -- Zugmaier, G -- Sarup, J -- Shepard, M -- Slamon, D -- Lippman, M E -- New York, N.Y. -- Science. 1990 Sep 28;249(4976):1552-5.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Vincent T. Lombardi Cancer Research Center, Georgetown University Medical Center, Washington, DC 20007.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2218496" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Antibodies, Monoclonal ; Binding, Competitive ; Breast Neoplasms ; Cell Line ; Chromatography, Affinity ; Female ; Humans ; Kinetics ; Ligands ; Molecular Weight ; Phosphorylation ; Protein-Tyrosine Kinases/metabolism ; Proto-Oncogene Proteins/genetics/immunology/*metabolism ; Proto-Oncogenes ; Receptor, Epidermal Growth Factor/isolation & purification/*metabolism ; Transfection
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  • 78
    Publication Date: 1990-11-16
    Description: The Wilms tumor locus on chromosome 11p13 has been mapped to a region defined by overlapping, tumor-specific deletions. Complementary DNA clones representing transcripts of 2.5 (WIT-1) and 3.5 kb (WIT-2) mapping to this region were isolated from a kidney complementary DNA library. Expression of WIT-1 and WIT-2 was restricted to kidney and spleen. RNase protection revealed divergent transcription of WIT-1 and WIT-2, originating from a DNA region of less than 600 bp. Both transcripts were present at high concentrations in fetal kidney and at much reduced amounts in 5-year-old and adult kidneys. Eleven of 12 Wilms tumors classified as histopathologically heterogeneous exhibited absent or reduced expression of WIT-2, whereas only 4 of 14 histopathologically homogeneous tumors showed reduced expression. These data demonstrate a molecular basis for the pathogenetic heterogeneity in Wilms tumorigenesis.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Huang, A -- Campbell, C E -- Bonetta, L -- McAndrews-Hill, M S -- Chilton-MacNeill, S -- Coppes, M J -- Law, D J -- Feinberg, A P -- Yeger, H -- Williams, B R -- New York, N.Y. -- Science. 1990 Nov 16;250(4983):991-4.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Genetics, Hospital for Sick Children, Toronto, Ontario, Canada.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2173145" target="_blank"〉PubMed〈/a〉
    Keywords: Base Sequence ; Blotting, Northern ; DNA/genetics ; Genes, Wilms Tumor/*genetics ; Humans ; Kidney Neoplasms/*genetics ; Molecular Sequence Data ; Transcription, Genetic ; Wilms Tumor/*genetics
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  • 79
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    Unknown
    American Association for the Advancement of Science (AAAS)
    Publication Date: 1990-05-04
    Description: The amino acid sequences of three fragments of cyanogen bromide-digested human placental inositol 1,2-cyclic phosphate 2-phosphohydrolase, an enzyme of the phosphatidylinositol signaling pathway, are identical to sequences within lipocortin III, a member of a family of homologous calcium- and phospholipid-binding proteins that do not have defined physiological functions. Lipocortin III has also been previously identified as placental anticoagulant protein III (PAP III) and calcimedin 35 alpha. Antibodies to PAP III detected PAP III and inositol 1,2-cyclic phosphate 2-phosphohydrolase with identical reactivity on immunoblotting. In addition, inositol 1,2-cyclic phosphate 2-phosphohydrolase was stimulated by the same acidic phospholipids that bind lipocortins.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Ross, T S -- Tait, J F -- Majerus, P W -- HLBI 14147/HL/NHLBI NIH HHS/ -- HLBI 16634/HL/NHLBI NIH HHS/ -- HLBI 40801/HL/NHLBI NIH HHS/ -- New York, N.Y. -- Science. 1990 May 4;248(4955):605-7.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Internal Medicine, Washington University School of Medicine, St Louis, MO 63110.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2159184" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Annexin A3 ; Annexins ; Calcium-Binding Proteins/*genetics ; Female ; Humans ; Immunoblotting ; Kinetics ; Molecular Sequence Data ; Phosphoric Diester Hydrolases/*genetics/isolation & purification/metabolism ; Placenta/*enzymology ; Pregnancy
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  • 80
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    Unknown
    American Association for the Advancement of Science (AAAS)
    Publication Date: 1990-10-26
    Description: The yeast protein RAP1, initially described as a transcriptional regulator, binds in vitro to sequences found in a number of seemingly unrelated genomic loci. These include the silencers at the transcriptionally repressed mating-type genes, the promoters of many genes important for cell growth, and the poly[(cytosine)1-3 adenine] [poly(C1-3A)] repeats of telomeres. Because RAP1 binds in vitro to the poly(C1-3A) repeats of telomeres, it has been suggested that RAP1 may be involved in telomere function in vivo. In order to test this hypothesis, the telomere tract lengths of yeast strains that contained conditionally lethal (ts) rap1 mutations were analyzed. Several rap1ts alleles reduced telomere length in a temperature-dependent manner. In addition, plasmids that contain small, synthetic telomeres with intact or mutant RAP1 binding sites were tested for their ability to function as substrates for poly(C1-3A) addition in vivo. Mutations in the RAP1 binding sites reduced the efficiency of the addition reaction.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Lustig, A J -- Kurtz, S -- Shore, D -- GM 40094/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 1990 Oct 26;250(4980):549-53.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Molecular Biology, Memorial Sloan-Kettering Cancer Center, New York, NY 10021.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2237406" target="_blank"〉PubMed〈/a〉
    Keywords: Base Sequence ; Binding Sites ; Chromosomes, Fungal/metabolism/*ultrastructure ; DNA-Binding Proteins/metabolism ; Fungal Proteins/genetics/*metabolism ; *Genes, Fungal ; *Genes, Mating Type, Fungal ; Molecular Sequence Data ; Mutation ; Plasmids ; Poly A/metabolism ; Poly C/metabolism ; Repetitive Sequences, Nucleic Acid ; Saccharomyces cerevisiae/*genetics ; Temperature ; *Transcription Factors ; Transformation, Genetic
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  • 81
    Publication Date: 1990-08-10
    Description: Somatic mutations in a subset of growth hormone (GH)-secreting pituitary tumors convert the gene for the alpha polypeptide chain (alpha s) of Gs into a putative oncogene, termed gsp. These mutations, which activate alpha s by inhibiting its guanosine triphosphatase (GTPase) activity, are found in codons for either of two amino acids, each of which is completely conserved in all known G protein alpha chains. The likelihood that similar mutations would activate other G proteins prompted a survey of human tumors for mutations that replace either of these two amino acids in other G protein alpha chain genes. The first gene so far tested, which encodes the alpha chain of Gi2, showed mutations that replaced arginine-179 with either cysteine or histidine in 3 of 11 tumors of the adrenal cortex and 3 of 10 endocrine tumors of the ovary. The mutant alpha i2 gene is a putative oncogene, referred to as gip2. In addition, gsp mutations were found in 18 of 42 GH-secreting pituitary tumors and in an autonomously functioning thyroid adenoma. These findings suggest that human tumors may harbor oncogenic mutations in various G protein alpha chain genes.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Lyons, J -- Landis, C A -- Harsh, G -- Vallar, L -- Grunewald, K -- Feichtinger, H -- Duh, Q Y -- Clark, O H -- Kawasaki, E -- Bourne, H R -- New York, N.Y. -- Science. 1990 Aug 10;249(4969):655-9.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Human Genetics, Cetus Corporation, Emeryville CA 94608.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2116665" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Base Sequence ; DNA, Neoplasm/genetics ; Endocrine System Diseases/*genetics ; Female ; GTP Phosphohydrolases/genetics/metabolism ; GTP-Binding Proteins/*genetics/metabolism ; Humans ; Male ; Molecular Sequence Data ; *Mutation ; Neoplasms/*genetics ; Oligonucleotide Probes ; *Oncogenes ; Pituitary Neoplasms/*genetics ; Polymerase Chain Reaction
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  • 82
    Publication Date: 1990-09-28
    Description: Heparin-binding growth factor-1 (HBGF-1) is an angiogenic polypeptide mitogen for mesoderm- and neuroectoderm-derived cells in vitro and remains biologically active after truncation of the amino-terminal domain (HBGF-1 alpha) of the HBGF-1 beta precursor. Polymerase chain reaction mutagenesis and prokaryotic expression systems were used to prepare a mutant of HBGF-1 alpha lacking a putative nuclear translocation sequence (amino acid residues 21 to 27; HBGF-1U). Although HBGF-1U retains its ability to bind to heparin, HBGF-1U fails to induce DNA synthesis and cell proliferation at concentrations sufficient to induce intracellular receptor-mediated tyrosine phosphorylation and c-fos expression. Attachment of the nuclear translocation sequence from yeast histone 2B at the amino terminus of HBGF-1U yields a chimeric polypeptide (HBGF-1U2) with mitogenic activity in vitro and indicates that nuclear translocation is important for this biological response.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Imamura, T -- Engleka, K -- Zhan, X -- Tokita, Y -- Forough, R -- Roeder, D -- Jackson, A -- Maier, J A -- Hla, T -- Maciag, T -- HL 32348/HL/NHLBI NIH HHS/ -- HL 35627/HL/NHLBI NIH HHS/ -- New York, N.Y. -- Science. 1990 Sep 28;249(4976):1567-70.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Laboratory of Molecular Biology, Jerome H. Holland Laboratory for the Biomedical Sciences, American Red Cross, Rockville, MD 20855.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/1699274" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Animals ; Base Sequence ; Binding, Competitive ; Cattle ; Cell Division/drug effects ; Cell Line ; Cell Nucleus/metabolism ; Cells, Cultured ; DNA Replication/drug effects ; Endothelium, Vascular/drug effects/metabolism ; Fibroblast Growth Factor 1/*genetics/metabolism/pharmacology ; Kinetics ; Mice ; Mitogens/pharmacology ; Molecular Sequence Data ; *Mutation ; Oligonucleotide Probes ; Receptors, Mitogen/metabolism ; Receptors, Vascular Endothelial Growth Factor ; Recombinant Proteins/metabolism/pharmacology ; Transcription, Genetic/drug effects
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  • 83
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    Unknown
    American Association for the Advancement of Science (AAAS)
    Publication Date: 1990-06-29
    Description: Soluble and hydrophobic lipid breakdown products have a variety of important signaling roles in cells. Here sphingoid bases derived in cells from sphingolipid breakdown are shown to have a potent and direct effect in mediating calcium release from intracellular stores. Sphingosine must be enzymically converted within the cell to a product believed to be sphingosine-1-phosphate, which thereafter effects calcium release from a pool including the inositol 1,4,5-trisphosphate-sensitive calcium pool. The sensitivity, molecular specificity, and reversibility of the effect on calcium movements closely parallel sphingoid base-mediated inhibition of protein kinase C. Generation of sphingoid bases in cells may activate a dual signaling pathway involving regulation of calcium and protein kinase C, comparable perhaps to the phosphatidylinositol and calcium signaling pathway.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Ghosh, T K -- Bian, J -- Gill, D L -- NS19304/NS/NINDS NIH HHS/ -- New York, N.Y. -- Science. 1990 Jun 29;248(4963):1653-6.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biological Chemistry, University of Maryland School of Medicine, Baltimore 21201.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2163543" target="_blank"〉PubMed〈/a〉
    Keywords: Adenosine Diphosphate/pharmacology ; Animals ; Calcimycin/pharmacology ; Calcium/*metabolism ; Cell Line ; Kinetics ; Phosphoric Monoester Hydrolases/metabolism ; Phosphorylcholine/analogs & derivatives/pharmacology ; Protein Kinase C/metabolism ; Second Messenger Systems/drug effects ; Sphingosine/*analogs & derivatives/*pharmacology ; Thermodynamics
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  • 84
    Publication Date: 1990-03-09
    Description: Comparison of a lambda repressor-operator complex and a 434 repressor-operator complex reveals that three conserved residues in the helix-turn-helix (HTH) region make similar contacts in each of the crystallographically determined structures. These conserved residues and their interactions with phosphodiester oxygens help establish a frame of reference within which other HTH residues make contacts that are critical for site-specific recognition. Such "positioning contacts" may be important conserved features within families of HTH proteins. In contrast, the structural comparisons appear to rule out any simple "recognition code" at the level of detailed side chain-base pair interactions.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Pabo, C O -- Aggarwal, A K -- Jordan, S R -- Beamer, L J -- Obeysekare, U R -- Harrison, S C -- GM 29109/GM/NIGMS NIH HHS/ -- GM 31471/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 1990 Mar 9;247(4947):1210-3.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Howard Hughes Medical Institute, Department of Molecular Biology and Genetics, Johns Hopkins University School of Medicine, Baltimore, MD 21205.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2315694" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Asparagine ; Base Composition ; Base Sequence ; Binding Sites ; *DNA-Binding Proteins ; Glutamine ; Hydrogen Bonding ; Molecular Sequence Data ; Molecular Structure ; *Operator Regions, Genetic ; Protein Conformation ; Repressor Proteins/*metabolism ; Transcription Factors/*metabolism ; Viral Proteins ; Viral Regulatory and Accessory Proteins
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  • 85
    Publication Date: 1990-11-30
    Description: The gene designated gamma 134.5 maps in the inverted repeats flanking the long unique sequence of herpes simplex virus-1 (HSV-1) DNA, and therefore it is present in two copies per genome. This gene is not essential for viral growth in cell culture. Four recombinant viruses were genetically engineered to test the function of this gene. These were (i) a virus from which both copies of the gene were deleted, (ii) a virus containing a stop codon in both copies of the gene, (iii) a virus containing after the first codon an insert encoding a 16-amino acid epitope known to react with a specific monoclonal antibody, and (iv) a virus in which the deleted sequences were restored. The viruses from which the gene was deleted or which carried stop codons were avirulent on intracerebral inoculation of mice. The virus with the gene tagged by the sequence encoding the epitope was moderately virulent, whereas the restored virus reacquired the phenotype of the parent virus. Significant amounts of virus were recovered only from brains of animals inoculated with virulent viruses. Inasmuch as the product of the gamma 134.5 gene extended the host range of the virus by enabling it to replicate and destroy brain cells, it is a viral neurovirulence factor.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Chou, J -- Kern, E R -- Whitley, R J -- Roizman, B -- AI 1588-11/AI/NIAID NIH HHS/ -- AI 24009/AI/NIAID NIH HHS/ -- CA 47451/CA/NCI NIH HHS/ -- etc. -- New York, N.Y. -- Science. 1990 Nov 30;250(4985):1262-6.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Marjorie B. Kovler Viral Oncology Laboratories, University of Chicago, IL 60637.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2173860" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Animals ; Antibodies, Monoclonal ; Antigens, Viral/genetics/immunology ; Base Sequence ; Chromosome Deletion ; *Chromosome Mapping ; Codon ; DNA, Viral/genetics ; Encephalitis/*microbiology ; *Genes, Viral ; Herpes Simplex/*microbiology ; Humans ; *Immediate-Early Proteins ; Molecular Sequence Data ; Rabbits ; Repetitive Sequences, Nucleic Acid ; Simplexvirus/*genetics/growth & development/pathogenicity ; Thymidine Kinase/genetics ; Transfection ; Viral Proteins/*genetics ; Viral Regulatory and Accessory Proteins/genetics/immunology
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  • 86
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    Unknown
    American Association for the Advancement of Science (AAAS)
    Publication Date: 1990-10-12
    Description: Voltage-dependent ion channels are responsible for electrical signaling in neurons and other cells. The main classes of voltage-dependent channels (sodium-, calcium-, and potassium-selective channels) have closely related molecular structures. For one member of this superfamily, the transiently voltage-activated Shaker H4 potassium channel, specific amino acid residues have now been identified that affect channel blockade by the small ion tetraethylammonium, as well as the conduction of ions through the pore. Furthermore, variation at one of these amino acid positions among naturally occurring potassium channels may account for most of their differences in sensitivity to tetraethylammonium.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉MacKinnon, R -- Yellen, G -- GM 43949/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 1990 Oct 12;250(4978):276-9.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Cellular and Molecular Physiology, Harvard Medical School, Boston, MA 02115.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2218530" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Animals ; Electric Conductivity ; Kinetics ; Membrane Potentials/drug effects ; Molecular Sequence Data ; Mutagenesis, Site-Directed ; Oligonucleotide Probes ; Potassium Channels/drug effects/genetics/*physiology ; Tetraethylammonium ; Tetraethylammonium Compounds/*pharmacology
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  • 87
    Publication Date: 1990-03-02
    Description: Cold-sensitive mutations in the SPB genes (spb1-spb7) of Saccharomyces cerevisiae suppress the inhibition of translation initiation resulting from deletion of the poly(A)-binding protein gene (PAB1). The SPB4 protein belongs to a family of adenosine triphosphate (ATP)-dependent RNA helicases. The aberrant production of 25S ribosomal RNA (rRNA) occurring in spb4-1 mutants or the deletion of SPB2 (RPL46) permits the deletion of PAB1. These data suggest that mutations affecting different steps of 60S subunit formation can allow PAB-independent translation, and they indicate that further characterization of the spb mutations could lend insight into the biogenesis of the ribosome.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Sachs, A B -- Davis, R W -- R37 GM 21891/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 1990 Mar 2;247(4946):1077-9.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biochemistry, Stanford Medical Center, CA 94305.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2408148" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Base Sequence ; Carrier Proteins/genetics/metabolism ; DEAD-box RNA Helicases ; Molecular Sequence Data ; Mutation ; Poly(A)-Binding Proteins ; *Protein Biosynthesis ; RNA Nucleotidyltransferases/genetics/*metabolism ; RNA Processing, Post-Transcriptional ; RNA, Fungal/genetics/metabolism ; RNA, Ribosomal/genetics/*metabolism ; Ribosomal Proteins/genetics/*metabolism ; Ribosomes/*metabolism ; Saccharomyces cerevisiae/enzymology/*genetics ; *Saccharomyces cerevisiae Proteins ; Sequence Homology, Nucleic Acid
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  • 88
    Publication Date: 1990-02-16
    Description: Sulfonylurea-sensitive adenosine triphosphate (ATP)-regulated potassium (KATP) channels are present in brain cells and play a role in neurosecretion at nerve terminals. KATP channels in substantia nigra, a brain region that shows high sulfonylurea binding, are inactivated by high glucose concentrations and by antidiabetic sulfonylureas and are activated by ATP depletion and anoxia. KATP channel inhibition leads to activation of gamma-aminobutyric acid (GABA) release, whereas KATP channel activation leads to inhibition of GABA release. These channels may be involved in the response of the brain to hyper- and hypoglycemia (in diabetes) and ischemia or anoxia.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Amoroso, S -- Schmid-Antomarchi, H -- Fosset, M -- Lazdunski, M -- New York, N.Y. -- Science. 1990 Feb 16;247(4944):852-4.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Institut de Pharmacologie Moleculaire et Cellulaire, UPR 411 du CNRS, Valbonne, France.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2305257" target="_blank"〉PubMed〈/a〉
    Keywords: Adenosine Triphosphate/*physiology ; Animals ; Cell Hypoxia ; Deoxyglucose/pharmacology ; Glucose/metabolism/*pharmacology ; Hypoglycemic Agents/*pharmacology ; In Vitro Techniques ; Kinetics ; Oligomycins/pharmacology ; Potassium/pharmacology ; Potassium Channels/drug effects/*physiology ; Rubidium/metabolism ; Structure-Activity Relationship ; Substantia Nigra/drug effects/*physiology ; gamma-Aminobutyric Acid/*metabolism
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  • 89
    Publication Date: 1990-05-04
    Description: Platelet-derived growth factor (PDGF) stimulates phospholipase C (PLC) activity and the phosphorylation of the gamma isozyme of PLC (PLC-gamma) in vitro and in living cells. The role of PLC-gamma in the phosphoinositide signaling pathway was addressed by examining the effect of overexpression of PLC-gamma on cellular responses to PDGF. Overexpression of PLC-gamma correlated with PDGF-induced tyrosine phosphorylation of PLC-gamma and with PDGF-induced breakdown of phosphatidylinositol 4,5-bisphosphate (PIP2). However, neither bradykinin- nor lysophosphatidic acid-induced phosphoinositide metabolism was enhanced in the transfected cells, suggesting that the G protein-coupled phosphoinositide responses to these ligands are mediated by other PLC isozymes. The enhanced PDGF-induced generation of inositol trisphosphate (IP3) did not enhance intracellular calcium signaling or influence PDGF-induced DNA synthesis. Thus, enzymes other than PLC-gamma may limit PDGF-induced calcium signaling and DNA synthesis. Alternatively, PDGF-induced calcium signaling and DNA synthesis may use biochemical pathways other than phosphoinositide metabolism for signal transduction.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Margolis, B -- Zilberstein, A -- Franks, C -- Felder, S -- Kremer, S -- Ullrich, A -- Rhee, S G -- Skorecki, K -- Schlessinger, J -- New York, N.Y. -- Science. 1990 May 4;248(4955):607-10.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Rorer Biotechnology, King of Prussia, PA 19406.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2333512" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Calcium/physiology ; Cattle ; Cell Division/*drug effects ; Cells, Cultured ; DNA Replication/drug effects ; Genetic Vectors ; Inositol Phosphates/metabolism ; Isoenzymes/biosynthesis/*genetics/metabolism ; Kinetics ; Mice ; Platelet-Derived Growth Factor/*pharmacology ; Second Messenger Systems/*drug effects ; Transfection ; Type C Phospholipases/biosynthesis/*genetics/metabolism
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  • 90
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 1990-04-06
    Description: This article presents a short discussion of the development of the human genome program in the United States, a summary of the current status of the organization and administration of the National Institutes of Health component of the program, and some prospects for the future directions of the program and the applications of genome information.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Watson, J D -- New York, N.Y. -- Science. 1990 Apr 6;248(4951):44-9.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉National Center for Human Genome Research, National Institutes of Health, Bethesda, MD 20892.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2181665" target="_blank"〉PubMed〈/a〉
    Keywords: Base Sequence ; Budgets ; Dna ; Federal Government ; *Human Genome Project/economics/organization & administration ; Humans ; International Cooperation ; Internationality ; National Institutes of Health (U.S.)/organization & administration ; Research Support as Topic ; Risk Assessment ; United States
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  • 91
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    Unknown
    American Association for the Advancement of Science (AAAS)
    Publication Date: 1990-08-17
    Description: An antibody elicited to a distorted N-methyl porphyrin catalyzed metal ion chelation by the planar porphyrin. At fixed Zn2+ and Cu2+ concentrations, the antibody-catalyzed reaction showed saturation kinetics with respect to the substrate mesoporphyrin IX (2) and was inhibited by the hapten, N-methylmesoporphyrin IX (1). The turnover number of 80 hour-1 for antibody-catalyzed metallation of 2 with Zn2+ compares with an estimated value of 800 hour-1 for ferrochelatase. The antibody also catalyzed the insertion of Co2+ and Mn2+ into 2, but it did not catalyze the metallation of protoporphyrin IX (3) or deuteroporphyrin IX (4). The antibody has high affinity for several metalloporphyrins, suggesting an approach to developing antibody-heme catalysts for redox or electron transfer reactions.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Cochran, A G -- Schultz, P G -- New York, N.Y. -- Science. 1990 Aug 17;249(4970):781-3.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Chemistry, University of California, Berkeley 94720.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2389144" target="_blank"〉PubMed〈/a〉
    Keywords: Antibodies/*metabolism ; Antigens/immunology ; Catalysis ; Cobalt/metabolism ; Copper/metabolism ; Ferrochelatase/metabolism ; Kinetics ; Manganese/metabolism ; Mesoporphyrins/immunology/metabolism ; Metals/*metabolism ; Porphyrins/*metabolism ; Zinc/metabolism
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  • 92
    Publication Date: 1990-03-02
    Description: Human T cell leukemia virus type I (HTLV-I) is the etiological agent for adult T cell leukemia (ATL). The HTLV-I trans-activator protein Tax can activate the expression of its own long terminal repeat (LTR) and many cellular and viral genes. Tax down-regulated the expression of human beta-polymerase (hu beta-pol), a cellular enzyme involved in host cell DNA repair. This finding suggests a possible correlation between HTLV-I infection and host chromosomal damage, which is often seen in ATL cells.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Jeang, K T -- Widen, S G -- Semmes, O J 4th -- Wilson, S H -- New York, N.Y. -- Science. 1990 Mar 2;247(4946):1082-4.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Laboratory of Molecular Microbiology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD 20892.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2309119" target="_blank"〉PubMed〈/a〉
    Keywords: Base Sequence ; Cell Line ; Cell Line, Transformed ; DNA Polymerase I/*genetics ; DNA, Viral/genetics ; Gene Expression Regulation, Enzymologic ; Gene Expression Regulation, Viral ; Human T-lymphotropic virus 1/*genetics ; Humans ; Molecular Sequence Data ; Plasmids ; Promoter Regions, Genetic ; RNA, Messenger/biosynthesis ; Repetitive Sequences, Nucleic Acid ; Repressor Proteins/biosynthesis/*genetics ; Trans-Activators/biosynthesis/*genetics ; Transcription Factors/*genetics ; Transfection
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  • 93
    Publication Date: 1991-09-13
    Description: Three-dimensional (3-D) structural models of RNA are essential for understanding of the cellular roles played by RNA. Such models have been obtained by a technique based on a constraint satisfaction algorithm that allows for the facile incorporation of secondary and other structural information. The program generates 3-D structures of RNA with atomic-level resolution that can be refined by numerical techniques such as energy minimization. The precision of this technique was evaluated by comparing predicted transfer RNA loop and RNA pseudoknot structures with known or consensus structures. The root-mean-square deviation (2.0 to 3.0 angstroms before minimization) between predicted and control structures reveal this system to be an effective method in modeling RNA.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Major, F -- Turcotte, M -- Gautheret, D -- Lapalme, G -- Fillion, E -- Cedergren, R -- New York, N.Y. -- Science. 1991 Sep 13;253(5025):1255-60.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Departement d'Informatique et de Recherche Operationnelle, Universite de Montreal, Quebec, Canada.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/1716375" target="_blank"〉PubMed〈/a〉
    Keywords: Algorithms ; Anticodon/chemistry ; Base Sequence ; *Models, Molecular ; Molecular Sequence Data ; Nucleic Acid Conformation ; RNA/*chemistry ; RNA, Transfer/*chemistry
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  • 94
    Publication Date: 1991-03-29
    Description: Derivatives of the sunY self-splicing intron efficiently catalyzed the synthesis of complementary strand RNA by template-directed assembly of oligonucleotides. These ribozymes were separated into three short RNA fragments that formed active catalytic complexes. One of the multisubunit sunY derivatives catalyzed the synthesis of a strand of RNA complementary to one of its own subunits. These results suggest that prebiotically synthesized oligonucleotides might have been able to assemble into a complex capable of self-replication.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Doudna, J A -- Couture, S -- Szostak, J W -- New York, N.Y. -- Science. 1991 Mar 29;251(5001):1605-8.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Molecular Biology, Massachusetts General Hospital, Boston 02114.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/1707185" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Base Composition ; Base Sequence ; *Introns ; Molecular Sequence Data ; Nucleic Acid Conformation ; Oligoribonucleotides/metabolism ; RNA/*biosynthesis/genetics ; RNA Splicing ; RNA, Catalytic/*metabolism ; Templates, Genetic ; Tetrahymena/*genetics
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  • 95
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    Unknown
    American Association for the Advancement of Science (AAAS)
    Publication Date: 1991-04-19
    Description: For self-splicing of Tetrahymena ribosomal RNA precursor, guanosine binding is required for 5' splice-site cleavage and exon ligation. Whether these two reactions use the same or different guanosine-binding sites has been debated. A double mutation in a previously identified guanosine-binding site within the intron resulted in preference for adenosine (or adenosine triphosphate) as the substrate for cleavage at the 5' splice site. However, splicing was blocked in the exon ligation step. Blockage was reversed by a change from guanine to adenine at the 3' splice site. These results indicate that a single determinant specifies nucleoside binding for both steps of splicing. Furthermore, it suggests that RNA could form an active site specific for adenosine triphosphate.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Been, M D -- Perrotta, A T -- GM-40689/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 1991 Apr 19;252(5004):434-7.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biochemistry, Duke University Medical Center, Durham, NC 27710.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2017681" target="_blank"〉PubMed〈/a〉
    Keywords: Adenosine/*metabolism ; Adenosine Triphosphate/pharmacology ; Animals ; Base Sequence ; Binding Sites ; Exons ; Guanosine/metabolism ; *Introns ; Magnesium/pharmacology ; Molecular Sequence Data ; Molecular Structure ; Mutagenesis ; RNA Precursors/chemistry/genetics ; *RNA Splicing ; RNA, Catalytic/metabolism ; Tetrahymena/genetics
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  • 96
    Publication Date: 1991-08-23
    Description: The evolutionary significance of protein polymorphisms has long been debated. Exponents of the balanced theory advocate that selection operates to maintain polymorphisms, whereas the neoclassical school argues that most genetic variation is neutral. Some studies have suggested that protein polymorphisms are not neutral, but their significance has been questioned because one cannot eliminate the possibility that linked loci were responsible for the observed differences. Evidence is presented that an enzymatic phenotype can affect carbon flow through a metabolic pathway. Glucose flux differences between lactate dehydrogenase-B phenotypes of Fundulus heteroclitus were reversed by substituting the Ldh-B gene product of one homozygous genotype with that of another.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉DiMichele, L -- Paynter, K T -- Powers, D A -- New York, N.Y. -- Science. 1991 Aug 23;253(5022):898-900.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Wildlife and Fisheries Sciences, Texas A&M University, College Station 77843.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/1876847" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Blastocyst/enzymology ; Genotype ; Glucose/metabolism ; Glycolysis ; Isoenzymes ; Killifishes/embryology/*genetics/metabolism ; Kinetics ; L-Lactate Dehydrogenase/*genetics/metabolism ; Lactates/metabolism ; Lactic Acid ; Microinjections ; Phenotype ; Swine
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  • 97
    Publication Date: 1991-05-31
    Description: An in vivo selection system for isolating targets of DNA binding proteins in yeast was developed and used to identify the DNA binding site for the NGFI-B protein, a member of the steroid-thyroid hormone receptor superfamily. The feasibility of the technique was verified by selecting DNA fragments that contained binding sites for GCN4, a well-characterized yeast transcriptional activator. The DNA binding domain of NGFI-B, expressed as part of a LexA-NGFI-B-GAL4 chimeric activator, was then used to isolate a rat genomic DNA fragment that contained an NGFI-B binding site. The NGFI-B response element (NBRE) is similar to but functionally distinct from elements recognized by the estrogen and thyroid hormone receptors and the hormone receptor-like proteins COUP-TF, CF1, and H-2RIIBP. Cotransfection experiments in mammalian cells demonstrated that NGFI-B can activate transcription from the NBRE with or without its putative ligand binding domain.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Wilson, T E -- Fahrner, T J -- Johnston, M -- Milbrandt, J -- NS01018/NS/NINDS NIH HHS/ -- P01 CA49712/CA/NCI NIH HHS/ -- New York, N.Y. -- Science. 1991 May 31;252(5010):1296-300.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Pathology, Washington University School of Medicine, St. Louis, MO 63110.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/1925541" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Bacterial Proteins/metabolism ; Base Sequence ; Binding Sites ; Cloning, Molecular ; DNA, Fungal/*metabolism ; DNA-Binding Proteins/genetics/*metabolism/pharmacology ; Fungal Proteins/metabolism ; Molecular Sequence Data ; Nuclear Receptor Subfamily 4, Group A, Member 1 ; Plasmids ; *Protein Kinases ; Rats ; Receptors, Cytoplasmic and Nuclear ; Receptors, Steroid ; Repressor Proteins ; Saccharomyces cerevisiae/*genetics ; *Saccharomyces cerevisiae Proteins ; *Serine Endopeptidases ; Transcription Factors/genetics/*metabolism/pharmacology ; Transcription, Genetic ; Transfection
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  • 98
    Publication Date: 1991-09-20
    Description: CD45 is a leukocyte-specific, transmembrane protein tyrosine phosphatase (PTPase) required for T cell responsiveness. How the activity of PTPases is regulated in vivo is unclear. Treatment of murine thymocytes and a variety of murine T cell lines with the calcium ionophore ionomycin decreased CD45 PTPase activity. Ionomycin treatment also led to a decreased phosphorylation of serine residues in CD45. These results indicate that increased intracellular calcium modulates CD45 PTPase activity, demonstrating regulation of CD45 PTPase activity in vivo, and also implicate serine dephosphorylation as a possible mechanism.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Ostergaard, H L -- Trowbridge, I S -- CA-17733/CA/NCI NIH HHS/ -- New York, N.Y. -- Science. 1991 Sep 20;253(5026):1423-5.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Cancer Biology, Salk Institute, San Diego, CA 92186.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/1654595" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Antigens, CD/*metabolism ; Antigens, CD45 ; Cell Line ; Histocompatibility Antigens/*metabolism ; Ionomycin/*pharmacology ; Kinetics ; Mice ; Mice, Inbred BALB C ; Phosphoprotein Phosphatases/*metabolism ; Protein Tyrosine Phosphatases ; Spleen/drug effects/enzymology/immunology ; T-Lymphocytes/drug effects/*enzymology/immunology ; Thymus Gland/immunology
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  • 99
    Publication Date: 1991-05-03
    Description: A transition state analogue was used to produce a mouse antibody that catalyzes transesterification in water. The antibody behaves as a highly efficient catalyst with a covalent intermediate and the characteristic of induced fit. While some features of the catalytic pathway were programmed when the hapten was designed and reflect favorable substrate-antibody interactions, other features are a manifestation of the chemical potential of antibody diversity. The fact that antibodies recapitulate mechanisms and pathways previously thought to be a characteristic of highly evolved enzymes suggests that once an appropriate binding cavity is achieved, reaction pathways commensurate with the intrinsic chemical potential of proteins ensue.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Wirsching, P -- Ashley, J A -- Benkovic, S J -- Janda, K D -- Lerner, R A -- GM43858-01/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 1991 May 3;252(5006):680-5.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Chemistry, Scripps Research Institute, La Jolla, CA 92037.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2024120" target="_blank"〉PubMed〈/a〉
    Keywords: Acylation ; Alcohols/metabolism ; Animals ; Antibodies, Monoclonal/immunology/*metabolism ; Antibody Specificity ; Binding Sites, Antibody ; *Catalysis ; Enzymes/metabolism ; Esterification ; Haptens ; Kinetics ; Mice ; Water
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  • 100
    Publication Date: 1991-12-20
    Description: Rap1A is a low molecular weight guanosine triphosphate (GTP)-binding protein in human neutrophil membranes whose cellular function is unknown. Rap1A was found to form stoichiometric complexes with the cytochrome b558 component of the phagocyte nicotinamide adenine dinucleotide phosphate (NADPH) oxidase system. The (guanosine-5'-O-(3-thiotriphosphate) (GTP-gamma-S)-bound form of Rap1A bound more tightly to cytochrome b558 than did the guanosine diphosphate-bound form. No complex formation was observed between cytochrome b558 and H-Ras-GTP-gamma-S or Rap1A-GTP-gamma-S that had been heat-inactivated, nor between Rap1A-GTP-gamma-S and hydrophobic proteins serving as controls. Complex formation between Rap1A-GTP-gamma-S and cytochrome b558 was inhibited by phosphorylation of Rap1A with cyclic adenosine monophosphate (cAMP)-dependent protein kinase. These observations suggest that Rap1A may participate in the structure or regulation of the NADPH oxidase system and that this function of the Rap1A protein may be altered by phosphorylation.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Bokoch, G M -- Quilliam, L A -- Bohl, B P -- Jesaitis, A J -- Quinn, M T -- 5RO126711/PHS HHS/ -- GM39434/GM/NIGMS NIH HHS/ -- GM44428/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 1991 Dec 20;254(5039):1794-6.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Immunology, Scripps Research Institute, La Jolla, CA 92037.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/1763330" target="_blank"〉PubMed〈/a〉
    Keywords: Binding Sites ; Chromatography, Gel ; Cytochrome b Group/isolation & purification/*metabolism ; GTP-Binding Proteins/antagonists & inhibitors/isolation & ; purification/*metabolism ; Guanosine 5'-O-(3-Thiotriphosphate)/metabolism ; Humans ; Kinetics ; Macromolecular Substances ; NADH, NADPH Oxidoreductases/*metabolism ; NADPH Oxidase ; Neutrophils/enzymology ; Phosphorylation ; Protein Binding ; Protein Kinase C/metabolism ; Proto-Oncogene Proteins/metabolism ; Recombinant Proteins/antagonists & inhibitors/isolation & purification/metabolism ; rap GTP-Binding Proteins
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