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  • Journals
  • Articles  (501)
  • rice  (291)
  • Nitrogen  (211)
  • Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition  (501)
  • 1
    Electronic Resource
    Electronic Resource
    Springer
    Biology and fertility of soils 31 (2000), S. 470-477 
    ISSN: 1432-0789
    Keywords: Key words Cover crop ; Nitrogen ; Corn ; Available N
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract  This study was conducted to determine effects of long-term winter cover cropping with hairy vetch, cereal rye and annual ryegrass on soil N availability and corn productivity. From 1987 to 1995, with the exception of the first year of the study, the cover crops were seeded each year in late September or early October after the corn harvest and incorporated into the soil in late April or early May. Corn was seeded 10 days to 2 weeks after the cover crop residues had been incorporated, and N fertilizer was applied as a side-dressing at rates of 0, 67, 134, or 201 kg N ha–1 each year. While the average annual total N input from the above-ground biomass of the cover crops was highest for hairy vetch (72.4 kg N ha–1), the average annual total C input was highest for cereal rye (1043 kg C ha–1) compared with the other cover crops. Hairy vetch was the only cover crop that significantly increased pre-side-dressed NO3 –-N (Ni) corn biomass and N uptake at 0 N. At an N fertilizer rate of 134 kg N ha–1 or higher, the cover crops had a minimal effect on corn biomass. This indicated that even after 9 years of winter cover cropping, the effect of the cover crops on corn growth resulted primarily from their influence on soil N availability. The amount of available N estimated from the cover crops (Nac) was significantly correlated with relative corn biomass production (r 2=0.707, P〈0.001). The total amount of available N, comprising Nac and N added from fertilizer (Nf), was strongly correlated (r 2=0.820, P〈0.001)) with relative corn biomass production. The correlation was also high for the available N comprising Ni and Nf (r 2=0.775, P〈0.001). Although cereal rye and annual ryegrass did not improve corn biomass production in the short term, they benefited soil organic N accumulation and gradually improved corn biomass production compared with the control over the long term.
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  • 2
    Electronic Resource
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    Springer
    Nutrient cycling in agroecosystems 57 (2000), S. 171-181 
    ISSN: 1573-0867
    Keywords: boron fertilization ; rape ; rice ; residual effect
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Long-term field experiments (3–4 years) were conducted to evaluate the residual effect of boron (B) fertilizer for oilseed rape (Brassica napus L.) in an intensive crop rotation including two rice (Oryza sativa) crops per year. Experiments were conducted on four sites where the soil types were sandy, silty and clayey Inceptisols, and an Ultisol, located in the Zhejiang Province, Southeast China. Application of B fertilizer at rates of 1.1, 1.65 and 3.3 kg B/ha in the first year showed a different residual effect on oilseed yield in successive years, but had only small positive effects on the rice grain yield at two sites. The residual effect of 1.1 kg B/ha remained fully effective in correcting B deficiency in oilseed rape for 2 years in the Inceptisols, whereas the residual effect of 1.65 kg B/ha continued to correct B deficiency for at least 3 years in both the Inceptisols and the Ultisol. Foliar application of B fertilizer generally corrected B deficiency for oilseed rape but showed limited residual effect in the following years after application. The decline in residual values of B from a single fertilizer addition was closely related to the soil and leaf B concentration. Soil available B also decreased dramatically with the advance of rotation, but a larger decrease was found at a depth of 20–40-cm for the Inceptisols and the Ultisol. Thus, a more detailed understanding of the B cycling in the system is now needed to optimize management of B fertilizer.
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  • 3
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    Springer
    Nutrient cycling in agroecosystems 58 (2000), S. 141-159 
    ISSN: 1573-0867
    Keywords: methane ; rice ; Oryza sativa ; anaerobic ; model ; simulation ; carbon dynamics
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The development of the MERES (Methane Emissions in Rice EcoSystems) model for simulating methane (CH4) emissions from rice fields is described. The CERES-Rice crop simulation model was used as a basis, employing the existing routines simulating soil organic matter (SOM) decomposition to predict the amount of subsrate available for methanogenesis. This was linked to an existing submodel, described elsewhere in this volume (Arah & Kirk, 2000), which calculates steady-state fluxes and concentrations of CH4 and O2 in flooded soils. Extra routines were also incorporated to simulate the influence of the combined pool of alternative electron acceptors in the soil (i.e., NO3 −, Mn4+, Fe3+, SO4 2−) on CH4 production. The rate of substrate supply is calculated in the SOM routines of the CERES-Rice model from (a) the rate of decomposition of soil organic material including that left from the previous crop and any additions of organic matter, (b) root exudates (modified from the original CERES-Rice model using recent laboratory data), and (c) the decomposition of dead roots from the current crop. A fraction of this rate of substrate supply, determined by the concentration of the oxidized form of the alternative electron acceptor pool, is converted to CO2 by bacteria which outcompete the methanogenic bacteria, thereby suppressing CH4 production. Any remaining fraction of the substrate supply rate is assumed to be potentially available for methanogenesis. The CH4 dynamics submodel uses this potetial methanogenesis rate, along with a description of the root length distribution in the soil profile supplied by the crop model, to calculate the steady-state concentrations and fluxes of O2 and CH4. The reduced form of the alternative electron acceptor pool is allowed to reoxidize when soil pores fill with air if the field is drained. The MERES model was able to explain well the seasonal patterns of CH4 emissions in an experiment involving mid- and end-season drainage and additions of organic material at IRRI in the Philippines.
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  • 4
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    Nutrient cycling in agroecosystems 58 (2000), S. 179-199 
    ISSN: 1573-0867
    Keywords: climate change ; databases ; GIS ; methane ; rice ; soils ; weather
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract As part of a series of papers describing the use of a simulation model to extrapolate experimental measurements of methane (CH4) emissions from rice fields in Asia and to evaluate the large-scale effect of various mitigation strategies, the collation and derivation of the spatial databases used are described. Daily weather data, including solar radiation, minimum and maximum temperatures, and rainfall were collated from 46 weather stations from the five countries in the study, namely China, India, Indonesia, Philippines, and Thailand. Quantitative soil data relevant to the input requirements of the model were derived by combining data from the World Inventory of Soil Emissions (WISE) database, the ISIS database, and the FAO Digital Soil Map of the World (FAO-DSMW). These data included soil pH; organic carbon content; sand, silt, and clay fractions; and iron content for top and subsoil layers, and average values of bulk density and available water capacity for the whole profile. Data on the areas allocated to irrigated, rainfed, upland, and deepwater rice at the province or district level were derived from the Huke & Huke (1997) database developed at IRRI. Using a geographical information system (GIS), a series of georeferenced data sets on climate, soils, and land use were derived for each country, at the province or district level. A summary of the soil-related derived databases is presented and their applicationn for use in global change modeling discussed.
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  • 5
    ISSN: 1573-0867
    Keywords: methane ; rice ; Oryza sativa ; anaerobic ; model ; simulation ; carbon dynamics
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The MERES (Methane Emissions from Rice EcoSystems) simulation model was tested using experimental data from IRRI and Maligaya in the Philippines and from Hangzhou in China. There was good agreement between simulated and observed values of total aboveground biomass, root weight, grain yield, and seasonal methane (CH4) emissions. The importance of the contribution of the rice crop to CH4 emissions was highlighted. Rhizodeposition (root exudation and root death) was predicted to contribute about 380 kg C ha−1 of methanogenic substrate over the season, representing 37% of the total methanogenic substrate from all sources when no organic amendments were added. A further 225 kg C ha−1 (22%) was predicted to come from previous crop residues, giving a total of around 60% originating from the rice crop, with the remaining 41% coming from the humic fraction of the soil organic matter (SOM). Sensitivity analysis suggested that the parameter representing transmissivity to gaseous transfer per unit root length (λr) was important in determining seasonal CH4 emissions. As this transmissivity increased, more O2 was able to diffuse to the rhizosphere, so that CH4 production by methanogens was reduced and more CH4 was oxidized by methanotrophs. These effects outweighed the opposing influence of increased rate of transport of CH4 through the plant, so that the overall effect was to reduce the amount of CH4 emitted over the season. Varying the root-shoot ratio of the crop was predicted to have little effect on seasonal emissions, the increased rates of rhizodeposition being counteracted by the increased rates of O2 diffusion to the rhizosphere. Increasing the length of a midseason drainage period reduced CH4 emissions significantly, but periods longer than 6–7 d also decreased rice yields. Organic amendments with low C/N were predicted to be more beneficial, both in terms of enhancing crop yields and reducing CH4 emissions, even when the same amount of C was applied. This was due to higher rates of immobilization of C into microbial biomass, removing it temporarily as a methanogenic substrate.
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  • 6
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    Sciences of soils 5 (2000), S. 10-21 
    ISSN: 1432-9492
    Keywords: Soil temperature ; Triticum aestivum ; Stubble retention ; Nitrogen ; Early growth
    Source: Springer Online Journal Archives 1860-2000
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Early growth and development are often lower when wheat is sown into standing stubble. A study was conducted to determine whether this difference in early growth could be explained by the effects of stubble on soil temperature in the vicinity of the young plant. The roles of nitrogen nutrition and soil strength were also assessed. Three crops were monitored (1990–1992), with the wheat being sown into either standing wheat stubble after a no-till fallow (NT), or into no-tilled plots from which the stubble had been removed by burning (NB). Measurements were made of wheat growth and development, soil and plant N, soil temperature and penetration resistance. The site was on a black earth near Warialda in the northern wheatbelt of New South Wales, Australia. In 1992 wheat was also grown under simulated stubble to isolate the shading and soil temperature effects of stubble from other factors. A significant (P〈0.05) relationship was found between average soil temperature and above ground dry matter (DM) at 65 days after sowing (DAS) but not at 107 DAS. This relationship accounted for differences in DM production at 65 DAS between NT and NB treatments in 1991 and 1992, but not in 1990. In that year the lower DM production in NT plots was associated with poorer N nutrition, and possibly disease. Laboratory incubations indicate that immobilisation of N as stubble decomposed could have contributed to this. Burning stubble produced no immediate increase in soil N availability, so that it is unlikely that N contained in stubble contributed to the difference. Soil strength differences between treatments and phytotoxic effects are unlikely to have contributed to growth differences in this soil.
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  • 7
    ISSN: 1573-5036
    Keywords: drought ; Heterodera sacchari ; nematode ; Oryza glaberrima ; Oryza sativa ; plant water status ; rice ; West Africa
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract This study was undertaken to examine the influence of cyst nematodes (Heterodera sacchari) and drought stress, in isolation and combination, on the water status and growth of rice in Côte d'Ivoire. Drought is considered one of the main yield-limiting factors to upland rice in West Africa, while H. sacchari is emerging as a potentially serious pest. A field study conducted during 1997 at the West Africa Rice Development Association (WARDA) showed that under low water availability in sandy soil, damage to a nematode susceptible Oryza sativa (cv IDSA6) is significant. Visual drought score and physiological parameters were significantly affected (P≤0.01) in plots with a mean population density of 39.4 H. sacchari eggs ml-1 soil at 81 days after sowing, compared to plots with a mean density of 1.2 eggs ml-1. Stomatal conductance, leaf water potential and relative water content were lower, leaf chlorophyll content was greater, and near total yield losses were observed in higher nematode density plots. In 1-l pots following 5 days of imposed drought, the H. sacchari-resistant and drought-resistant O. glaberrima (cv CG14) showed a reduction in stomatal conductance of 73% and in leaf water potential by 0.96 MPa (54%). The effect of H. sacchari (473 eggs l-1 soil) inoculated as cysts to soil before sowing was similar but less severe. The combination of both stresses had similar but yet more pronounced effects than the single stresses on stomatal conductance, leaf water potential and leaf dry weight in CG14. IDSA6 responded in a similar manner to CG14, but less acutely to both stresses. Only the combined stresses resulted in a significant (P≤0.05) reduction in osmotic potential and root dry weight compared with the control, for either CG14 or IDSA6. It is suggested that H. sacchari increased the effects of drought and drought-related losses. This may give a false impression of drought susceptibility in field screening for cultivars, and complicate models which predict crop damage caused by nematodes.
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  • 8
    ISSN: 1573-5036
    Keywords: residual effect of gypsum ; rice ; selenium toxicity ; sulphur ; wheat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract A field experiment was conducted for 2 years on an alkaline calcareous seleniferous soil to study the effect of different levels of gypsum (0.2 – 3.2 t ha−1) applied to wheat only in the first year on Se accumulation by wheat (Triticum aestivum L.) – rice (Oryza sativa L.) cropping sequence. With gypsum application, grain yield of both rice and wheat crops increased by 0.4 – 0.5 t ha−1; the increase in straw yield was 0.4 – 1.1 t ha−1. Significant reduction in Se accumulation by wheat was observed with gypsum application up to 0.8 t ha−1 and its residual effect was evident on the following crops for 2 years. Reduction in Se accumulation varied from 53 to 64% in wheat grain, 46 to 49% in wheat straw, 35 to 63% in rice grain and 36 to 51% in rice straw with an application of gypsum at 0.8 t ha−1. A corresponding increase in S concentration was observed. In the gypsum-treated plots, the ratio of S:Se increased by 6 – 8 times in wheat and 3 – 6 times in rice. Reduction in Se accumulation by crop plants through gypsum application may help in lowering the risk of Se over-exposure of animals and humans that depend on diet materials grown on high selenium soils.
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  • 9
    ISSN: 1573-5060
    Keywords: durable resistance ; hybrids ; maize ; marker-assisted selection ; pearl millet ; resistance gene deployment strategies ; rice ; sorghum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Marker-assisted selection (MAS) for resistance genes (R-genes), identified using molecular markers and quantitative trait loci (QTL) analysis, is now possible in many crops. MAS can be used to pyramid several R-genes into a single host genotype. However, this may not provide durable genetic resistance because the pathogen is exposed to a full homozygous pyramid during hybrid seed production and to a full heterozygous pyramid in the resultant hybrid. Alternative gene deployment strategies that generate genetic variability were analysed, for hybrid cereal cultivars of pearl millet, maize, sorghum and rice, using maintainer lines (B-lines) with two smaller complementary pyramids. An F1 seed parent, produced on two such B-lines, can be used to produce a three-way hybrid. All target loci are heterozygous for resistance alleles in the F1 seed parent, and the pathogen is exposed in the hybrid to a host population that is heterogeneous and heterozygous for alleles at the resistance loci targeted by MAS. Alternatively, single-cross hybrids can be made on seed parents that are maintained by two B-lines that differ for the complementary resistance gene pyramids. In a cross-pollinated crop, the B-lines are allowed to intermate to produce a synthetic B-line. In an inbreeding crop, the B-lines are equivalent to a two-component multiline variety. In inbreeding crops, because there is no intermating between the B-line components, the resultant synthetic seed parents have a higher frequency of genotypes with resistance alleles (R-alleles) at several resistance loci. However, in both cross-pollinated and inbreeding crops the genotypic structure in the hybrids is almost the same. All alternatives to a single-cross hybrid having a full pyramid produce hybrid cultivars having lower frequencies of resistance alleles. The frequency of genotypes having R-alleles at several loci increases greatly in both seed parent and hybrid when the overall frequency of R-alleles in the maintainer lines increases. This is simply done by adding a maintainer line that has a full pyramid or by the component lines having overlapping pyramids.
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  • 10
    ISSN: 1573-5036
    Keywords: mechanical impedance ; Oryza sativa ; rice ; roots ; screening ; wax layers
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The development of a wax layer method for screening the ability of rice (Oryza sativa L.) roots to overcome mechanical impedance is described. Wax layers (3 mm thick) made of mixtures of white soft paraffin and paraffin wax were installed 50 mm deep in tubes of sand. The sand was watered with nutrient solution and planted with 3-d old rice seedlings. The numbers of root axes per plant that had penetrated the wax layers 24 d after planting were counted. The ratio of penetrated to total root axes per plant gave a misleading measure of root penetration ability, as rice varieties differed in the ratio of penetrated to total axes in a low impedance (3% wax) control. In non-flooded conditions, a 60% wax layer decreased root penetration (number of roots penetrating the wax layer per plant) to a mean of 74% of the low impedance control, whereas an 80% wax layer decreased mean root penetration to 31% of the control. The best measure of root penetration in non-flooded conditions was the number of axes penetrating an 80% wax layer. Flooding decreased root penetration of a 60% wax layer to a mean of 26% of the low impedance control. The best measure of root penetration in flooded conditions was the number of axes penetrating a 60% wax layer.
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  • 11
    ISSN: 1573-5036
    Keywords: Cyanobacteria ; `in situ' N2 fixation ; N fertilizer ; 15N balance ; rice
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract This study investigate the potential contribution of nitrogen fixation by indigenous cyanobacteria to rice production in the rice fields of Valencia (Spain). N2-fixing cyanobacteria abundance and N2 fixation decreased with increasing amounts of fertilizers. Grain yield increased with increasing amounts of fertilizers up to 70 kg N ha-1. No further increase was observed with 140 kg N ha-1. Soil N was the main source of N for rice, only 8–14% of the total N incorporated by plants derived from 15N fertilizer. Recovery of applied 15N-ammonium sulphate by the soil–plant system was lower than 50%. Losses were attributed to ammonia volatilization, since only 0.3–1% of applied N was lost by denitrification. Recovery of 15N from labeled cyanobacteria by the soil–plant system was higher than that from chemical fertilizers. Cyanobacterial N was available to rice plant even at the tillering stage, 20 days after N application.
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  • 12
    ISSN: 1573-5060
    Keywords: AFLP ; isozyme ; ISSR ; molecular marker ; RAPD ; rice
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract We have examined the effectiveness of similar numbers of markers from four molecular marker systems (AFLP, isozymes, ISSR and RAPD) for revealing genetic diversity and discriminating between infraspecific groups of Oryza sativa germplasm. Each marker system classifies the germplasm into three major groups (most effectively with isozymes and AFLPs), but with differences (primarily with ISSR) between the precise classifications generated. However, at the highest levels of genetic similarity there was only partial agreement as to relationships between individual accessions when different markers were used. When variance was partitioned among and within the three subspecific groups, although the differences were not significant, greater variation was found among than within groups using AFLP and isozymes, with the reverse for RAPD and ISSR. Measurement of polymorphism using average heterozygosity and effective number of alleles gave similar results for each marker system. These results are discussed in relation to various genetic resources conservation activities, and the advisability of extrapolating to other sets of germplasm particularly of other crop species.
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  • 13
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    Euphytica 116 (2000), S. 105-110 
    ISSN: 1573-5060
    Keywords: PCR ; RAPDS ; rice ; salt-tolerance
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The genetic diversity of three salinity tolerant rice varieties Pokkali, Nona-Bokra and Bicol was investigated using random amplified polymorphic DNAs(RAPDs). High yielding susceptible variety IR29 was used as check for comparison. The salinity performance of these varieties were tested by using rapid screening techniques at seedling stage. One hundred primers tested of which 42 revealed differences between Pokkali & Nonabokra, 43 between Pokkali & Bicol and 50 between Nonabokra and Bicol. Polymorphism differences between IR29 - Pokkali, IR29 - NonaBokra and IR29 - Bicol were 47%, 53% and 31%, respectively. Four primers amplified specific fragments that appeared in all the three salt tolerant varieties but not in the salt susceptible variety IR29. Primer UBC 9 (5′-CCTGCGCTTA-3′ produced a prominent diagnostic fragment of approximately 1600 bp; primer UBC 244 (5′-CAGCCAACCG-3′) generated a fragment of about 800 bp in the salt-tolerant varieties; primer UBC 251 (5′-CTTGACGGGG-3′) amplified one polymorphic band of 1100 bp and primer UBC 267(5′-CCATCTTGTG-3′) yielded a relatively weak polymorphic band of 1100 bp.
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  • 14
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    Nutrient cycling in agroecosystems 57 (2000), S. 75-82 
    ISSN: 1573-0867
    Keywords: nitrogen ; leaching ; paddy soil ; wheat ; rice
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Nitrogen in percolation water was observed in paddy field soil under rice/wheat rotation. Different N-application rates were designed. Porous pipes were installed in triplicate at depths of 30, 60 and 90 cm to collect the water in the period of wheat growth. Suction cups were installed in triplicate at the same depths to collect the water during the period of rice growth. NH4 +, NO3 - and total N in the water were analysed with a continuous-flow nitrogen analyzer. Results showed that nitrate was the predominant form of nitrogen in percolation water during the period of wheat growth. Nitrate leaching was high in early spring after the `tillering fertilisation'. More than 50 mg l-1 of nitrate concentration in percolation water was observed for 30 and 60 cm in depth and more than 15 mg l-1 were observed for 90 cm. The concentration decreased quickly and was very low, less than 2 mg l-1 usually, in the earring stage of wheat. Nitrate in water was low, less than 1.5 mg l-1 usually, when the field was flooded during the period of rice growth. Some soluble organic N existed in the water. Nitrate in percolation water increased when the field was drained. The leaching loss of nitrogen during winter wheat growth period was estimated to be about 3.4% of the N-fertiliser applied at the normal application rate of farmers; for the rice growth period it was around 1.8%. Although a reduced N-application decreased N leaching, it caused a marked decrease in crop yield.
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  • 15
    ISSN: 1573-0867
    Keywords: rice ; model ; simulation ; carbon dynamics ; China ; India ; Indonesia ; Philippines ; Thailand ; estimates
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The process-based crop/soil model MERES (Methane Emissions from Rice EcoSystems) was used together with daily weather data, spatial soil data, and rice-growing statistics to estimate the annual methane (CH4) emissions from China, India, Indonesia, Philippines, and Thailand under various crop management scenarios. Four crop management scenarios were considered: (a) a 'baseline' scenario assuming no addition of organic amendments or field drainage during the growing season, (b) addition of 3,000 kg DM ha−1 of green manure at the start of the season but no field drainage, (c) no organic amendments but drainage of the field for a 14-d period in the middle of the season and again at the end of the season, and (d) addition of 3,000 kg DM ha−1 of green manure and field drainage in the middle and end of the season. For each scenario, simulations were made at each location for irrigated and rainfed rice ecosystems in the main rice-growing season, and for irrigated rice in the second (or 'dry') season. Overall annual emissions (Tg CH4 yr−1) for a province/district were calculated by multiplying the rates of CH4 emission (kg CH4 ha−1 yr−1) by the area of rice grown in each ecosystem and in each season obtained from the Huke and Huke (1997) database of rice production. Using the baseline scenario, annual CH4 emissions for China, India, Indonesia, Philippines, and Thailand were calculated to be 3.73, 2.14, 1.65, 0.14, and 0.18 Tg CH4 yr−1, respectively. Addition of 3,000 kg DM ha−1 green manure at the start of the season increased emissions by an average of 128% across the five countries, with a range of 74–259%. Drainage of the field in the middle and at the end of the season reduced emissions by an average of 13% across the five countries, with a range of −10% to −39%. The combination of organic amendments and field drainage resulted in an increase in emissions by an average of 86% across the five countries, with a range of 15–176%. The sum of CH4 emissions from these five countries, comprising about 70% of the global rice area, ranged from 6.49 to 17.42 Tg CH4 yr−1, depending on the crop management scenario.
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  • 16
    ISSN: 1573-5060
    Keywords: drought resistance ; QTL mapping ; RFLP markers ; rice ; root traits ; vegetative stage
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Root morphology under well-watered conditions sampled on two occasions and under low-moisture stress was studied in a randomly chosen subset of 56 doubled haploid lines derived from a cross between IR64 and Azucena at two growth stages during the vegetative stage. A molecular map of the same population served as the basis for locating QTLs controlling root morphology and associated traits. The region flanking the RFLP markers RZ730 and RZ801 on chromosome 1 were associated with plant height in all three sampling environments. This position corresponds to sd-1 a semi-dwarfing gene. A total of 15 QTL were detected at the two developmental stages, of which only three QTL were common. Region flanked by RG157 and RZ318 (chromosome 2) contained QTL for root thickness under two different developmental stages. In total, 21 QTL for different traits were detected under low-moisture stress condition. While two QTL for plant height on chromosomes 1 and 3 were common, none of the loci for root morphological traits was common between the two different moisture regimes. The chromosomal segment between RG171 and RG157 contained QTL controlling tiller number per plant, total root length, root volume and total root number per plant. Absence of common QTL for root traits between two developmental stages and two moisture regimes suggests the existence of parallel genetic pathways operating at different growth stages and moisture regimes. Root volume and total root number per plant decreased significantly under stress, whereas maximum root length and plant height exhibited non-significant increases under stress.
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  • 17
    ISSN: 1432-0789
    Keywords: Key words Grasslands ; Management ; Microbial biomass ; Bacteria ; Fungi ; Nitrogen
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract  There is much interest in the development of agricultural land management strategies aimed at enhancing reliance on ecosystem self-regulation rather than on artificial inputs such as fertilisers and pesticides. This study tested the usefulness of measures of soil microbial biomass and fungal:bacterial biomass ratios as indicators of effective conversion from an intensive grassland system, reliant mainly on fertilisers for crop nutrition, to a low-input system reliant mainly on self-regulation through soil biological pathways of nutrient turnover. Analysis of soils from a wide range of meadow grassland sites in northern England, along a gradient of long-term management intensity, showed that fungal:bacterial biomass ratios (measured by phospholipid fatty acid analysis; PLFA) were consistently and significantly higher in the unfertilised than the fertilised grasslands. There was also some evidence that microbial biomass, measured by chloroform fumigation and total PLFA, was higher in the unfertilised than in the fertilised grasslands. It was also found that levels of inorganic nitrogen (N), in particular nitrate-N, were significantly higher in the fertilised than in the unfertilised grasslands. However, microbial activity, measured as basal respiration, did not differ between the sites. A field manipulation trial was conducted to determine whether the reinstatement of traditional management on an improved mesotrophic grassland, for 6 years, resulted in similar changes in the soil microbial community. It was found that neither the cessation of fertiliser applications nor changes in cutting and grazing management significantly affected soil microbial biomass or the fungal:bacterial biomass ratio. It is suggested that the lack of effects on the soil microbial community may be related to high residual fertility caused by retention of fertiliser N in the soil. On the basis of these results it is recommended that following the reinstatement of low-input management, the measurement of a significant increase in the soil fungal:bacterial biomass ratio, and perhaps total microbial biomass, may be an indicator of successful conversion to a grassland system reliant of self-regulation.
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  • 18
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    Biology and fertility of soils 29 (1999), S. 430-433 
    ISSN: 1432-0789
    Keywords: Key words Carbon ; Nitrogen ; Microbial biomass ; Mineralization ; Respiration
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract  The effects of acetate additions to northern hardwood forest soils on microbial biomass carbon (C) and nitrogen (N) content, soil inorganic N levels, respirable C and potential net N mineralization and nitrification were evaluated. The experiment was relevant to a potential watershed-scale calcium (Ca) addition that aims to replace Ca depleted by long-term exposure to acid rain. One option for this addition is to use calcium-magnesium (Mg) acetate, a compound that is inexpensive and much more readily soluble than the Ca carbonate that is generally used for large-scale liming. Field plots were treated with sodium (NA) acetate, Na bicarbonate or water (control) and were sampled (forest floor – Oe and Oa combined) 2, 10 and 58 days following application. It was expected that the addition of C would lead to an increase in biomass C and N and a decrease in inorganic N. Instead, we observed no effect on biomass C, a decline in biomass N and an increase in N availability. One possible explanation for our surprising results is that the C addition stimulated microbial activity but not growth. A second, and more likely, explanation for our results is that the C addition did stimulate microbial growth and activity, but there was no increase in microbial biomass due to predation of the new biomass by soil fauna. The results confirm the emerging realization that the effects of increases in the flow of C to soils, either by deliberate addition or from changes in atmospheric CO2, are more complex than would be expected from a simple C : N ratio analysis. Evaluations of large-scale manipulations of forest soils to ameliorate effects of atmospheric deposition or to dispose of wastes should consider microbial and faunal dynamics in considerable detail.
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  • 19
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    Biology and fertility of soils 28 (1999), S. 204-211 
    ISSN: 1432-0789
    Keywords: Key words Alley cropping ; Calcium ; Magnesium ; Nitrogen ; Phosphorus
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract  Balances between nutrients applied or mineralized and nutrients removed in maize grain and stover were calculated in a hedgerow intercropping experiment in which Leucaena leucocephala and L. pallida prunings and cattle manure were applied. Hedgerow intercropping (also called alley cropping) is an agroforestry system in which trees are grown in dense hedges between alleys where short-cycle crops are grown. The hedges are pruned periodically during the cropping period and the prunings are added to the soil as green manure. In control treatments, nutrient depletion per season was in the order of 7–19 kg N ha–1, 4–12 kg P ha–1, 10–26 kg K ha–1, 0–2 kg Ca ha–1 and 3–6 kg Mg ha–1. N fertilizer reversed the depletion of N, but it accelerated the depletion of the other nutrients. Manure and at least two applications of leucaena prunings resulted in net positive balances of N, K, and Ca between amounts applied or mineralized and amounts removed by maize. The amounts of P and Mg applied with, or mineralized from, prunings or manure were insufficient to offset the negative balances of these nutrients.
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  • 20
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    Biology and fertility of soils 28 (1999), S. 182-195 
    ISSN: 1432-0789
    Keywords: Key words Alley cropping ; Calcium ; Magnesium ; Nitrogen ; Phosphorus ; Intercropping
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract  A litter bag technique was used to study the decomposition and release of N, P, K, Ca, and Mg from Leucaena leucocephala and L. pallida prunings and cattle manure in a hedgerow intercropping trial conducted in the Ethiopian highlands. Hedgerow intercropping (also called alley cropping or alley farming) is an agroforestry system in which trees are grown in dense hedges between alleys where short-cycle crops are grown. The hedges are pruned periodically during the cropping period and the prunings are added to the soil as green manure. Manure was the most resistant to decomposition, losing only 15% of its dry matter (DM) in 15 weeks, compared to 41–57% lost by leucaena prunings. Large quantities of K (up to 104 kg ha–1) were mineralized from prunings and manure, but Ca and Mg were mostly immobilized. More N and P were released from prunings than from manure, which resulted in net immobilization of these nutrients in the initial stages of decomposition and net mineralization in later stages. Between the leucaenas more N was mineralized and less Ca and Mg were immobilized when L. leucocephala prunings were applied than when L. pallida prunings were applied. Fertilizer N increased DM decomposition and N mineralization. Mineralization of the nutrients was constrained by lignin and polyphenol contents. It is concluded that leucaena mulch and cattle manure may be significant sources of N and K for crop growth, but external sources of P, Ca and Mg may be required, particularly in acid soils which have low contents of these nutrients. However, this fertility effect has to be evaluated against the competition effect of trees to predict crop response.
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  • 21
    ISSN: 1432-0789
    Keywords: Key words Alley cropping ; Calcium ; Magnesium ; Nitrogen ; Phosphorus ; Leaf pruning
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract  The effects of Leucaena leucocephala and L. pallida prunings and cattle manure on maize nutrient uptake and yield were investigated in a hedgerow intercropping trial in the Ethiopian highlands. Hedgerow intercropping (also called alley cropping) is an agroforestry system in which trees are grown in dense hedges between alleys where short-cycle crops are grown. The hedges are pruned periodically during the cropping period and the prunings are added to the soil as green manure. For each leucaena species, the experiment had 16 treatments resulting from a factorial combination of four levels of leucaena leaf prunings (no prunings applied; first prunings applied; first and second prunings applied; first, second and third prunings applied), two levels of air-dried cattle manure (0 and 3 t dry matter ha–1) and two levels of N fertilizer (0 and 40 kg N ha–1 as urea). Uptake of N, P and K increased significantly with application of the three nutrient sources, but uptake of Ca and Mg either did not respond or decreased with application of prunings and manure. All the three factors increased maize grain and stover yields significantly, usually with no significant interactions between the factors. At least two applications of prunings were required to significantly increase nutrient uptake and maize yield. Maize in the row closest to the hedge did not respond to these nutrient inputs. It is concluded that hedgerow intercropping, with or without manure application, can increase crop yields moderately (to 2–3 t ha–1 maize grain yields) in the highlands, but P, Ca and Mg may have to be supplied from external sources if they are deficient in the soil. Additional N is still required for higher yields (〉4 t ha–1 maize grain yields). However, quantification of the competition effects of the trees is also required to confirm these results.
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  • 22
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    Biology and fertility of soils 29 (1999), S. 38-45 
    ISSN: 1432-0789
    Keywords: Key words Grassland ; Nitrogen ; Mineralization ; Macro-organic matter ; Soil particles
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract  A study was conducted to determine mineralization rates in the field and in different soil layers under three grassland managements (viz. a reseeded sward, a permanent sward with a conventional N management, and a long-term grass sward with 0 N (0-N) input). Potential mineralization rates of soil particles (sand, silt and clay) and macro-organic matter fractions of different sizes (i.e. 0.2–0.5, 0.5–2.0 and 〉2 mm) were also determined in the laboratory. In the reseeded plots, net mineralization was unchanged down to 40 cm depth. In the undisturbed conventional-N swards, mineralization rates were substantially higher in the top layer (0–10 cm) than in the deeper layers. In plots which had received no fertilizer N, mineralization was consistently low in all the layers. There was more macro-organic matter (MOM) in the 0-N plots (equivalent to 23 g kg–1 soil for 0–40 cm) than in the two fertilized plots (i.e. conventional-N and reseeded) which contained similar amounts (ca. 15 g kg–1 soil). C and N contents of separated soil particles did not differ amongst the treatments, but there were large differences with depth. Potential mineralization in the bulk soil was greatest in the 0–10 cm layers and gradually decreased with depth in all the treatments. Separated sand particles had negligible rates of potential mineralization and the clay component had the highest rates in the subsurface layers (10–40 cm). MOMs had high potential rate of mineralization in the surface layer and decreased with soil depth, but there was no clear pattern in the differences between different size fractions.
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  • 23
    ISSN: 1573-0867
    Keywords: ammonia volatilization ; green manure ; inhibitor ; NBPT ; rice ; urea hydrolysis ; wheat straw
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Using a forced-draft chamber technique, the suppression of NH3 volatilization losses by applying N-(n-butyl) thiophosphoric triamide (NBPT) was studied in an alkaline sandy loam soil amended with green manure or wheat straw. Applied urea was completely hydrolysed in 12, 8 and 6 days in unamended, green manure and wheat straw amended soil, respectively. By applying 0.5% (w/w of urea) NBPT, complete hydrolysis of urea was delayed up to 16 days in the unamended soil, whereas in wheat straw amended soil urea hydrolysis was completed by the 12th day even when it was treated with 2% NBPT. Applied at 1 or 2% level, NBPT delayed the NH3 volatilization to the 4th day after application of urea in green manure or wheat straw amended soil. Hydrolysis of urea was more effectively retarded by applying NBPT in the unamended soil than in soil amended with green manure or wheat straw. In the unamended soil, 7.1% of the applied urea was lost through NH3 volatilization. The losses were reduced to 1.2 and 0.7% by applying 0.5 and 1% NBPT, respectively. Enhanced NH3 volatilization caused by the green manure or wheat straw was counteracted by applying NBPT.
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  • 24
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    Nutrient cycling in agroecosystems 54 (1999), S. 189-197 
    ISSN: 1573-0867
    Keywords: boron toxicity ; oilseed rape ; rice ; rotation ; soil boron ; seed yield
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Yields in intensive rice (Oryza sativa L.) -based rotations in Asia are stagnating or declining because of decreasing nutrient availability and depletion of soil nutrient reserves. In the rape (Brassica napus L.)–rice–rice cropping rotation of southeast China, where boron (B) deficiency is widespread and B fertiliser is needed to correct it, our objective was to evaluate the risks of fertiliser-induced B toxicity in oilseed rape and in rice. Response of oilseed rape to B fertiliser application at rates up to 6.6 kg B ha-1 was studied in seven field experiments on three contrasting soils of Zhejiang province, alluvial, red and blue-purple soils. The effects of up to 3.3 kg B ha-1 in 1 year, 6.6 kg B ha-1 in 2 years or 9.9 kg B ha-1 in 3 years were studied on oilseed rape and the one or two rice crops grown immediately after rape in each annual crop rotation. Soils varied in initial hot CaCl2-extractable B in the 0–15-cm layer from 0.24 to 0.99 mg kg-1. At the stem elongation stage of oilseed rape, 3.3 kg B ha-1 depressed shoot dry matter on soils with low clay and organic matter content. However, the subsequent effects of high fertiliser B on seed yield were minimal even at 6.6 kg B ha-1. Moreover, the application of a total of 6.6 or 9.9 kg B ha-1 as successive annual applications of 3.3 kg B ha-1 to oilseed rape generally had no negative effect on seed yield of oilseed rape. The single exception was on a sandy alluvial soil where a total of 6.6 kg B ha-1 in 2 years slightly depressed seed yield of oilseed rape. Grain yields of rice crops grown in rotation after oilseed rape were unaffected by B applications up to 6.6 kg ha-1. The minimal effects of a total of 6.6 kg B ha-1 applied over 2 years on seed yield were consistent with the modest increase in hot CaCl2-extractable B levels. It is concluded that there is limited risk of B toxicity from the use of borax fertiliser at up to 4–8 times recommended rates in rape–rice cropping rotations in southeast China. The low risk of B toxicity can be attributed to the relatively high B removal in harvested seed, grain and stubble, the redistribution of fertiliser B by leaching in the 0–60 cm layer and to B sorption.
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  • 25
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    Nutrient cycling in agroecosystems 55 (1999), S. 89-94 
    ISSN: 1573-0867
    Keywords: algae ; flooded soils ; N cycling ; nitrogen ; 15N ; rice
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Algal N labelled with 15N added to a flooded soil in laboratory columns without plants was studied to determine the changes over time in the fate of N assimilated by algae and to study how its fate is affected by (a) exclusion of light simulating complete closure of the rice canopy, and (b) addition of fertilizer-NH4 *. In the light but with no added fertilizer-N there was little net mineralization of the added algal N during the first 4 weeks, but after 8 weeks 42% had been mineralized, of which 95% was denitrified. Exclusion of light caused net mineralization to proceed more rapidly in the first 4 weeks due to the death of algal cells and lowered reassimilation. After 8 weeks 51% had been mineralized, of which 54% was denitrified, 16% volatilized and 30% was present as KCl exchangeable NH4 +-N. Application of fertilizer-NH4 + apparently caused mineralization of 25% of the algal N within one week but the results were probably affected by pool substitution in which labelled N mineralized to NH4 +-N was diluted with fertilizer – NH+ 4 and then immobilized leaving more labelled NH4–N in the mineral pool. After 8 weeks, 42% of algal N had been mineralized, of which 69% was estimated to have been denitrified, 19% lost through NH3 volatilization and 12% remained as extracted NH4 ++NO- 3. Uptake of N by a rice crop would reduce the gaseous losses. Algal N was mineralized quickly enough to be available during the growing season of a rice crop and, depending on field conditions, algae may have a role in assimilating N and protecting it from loss as well as being a major driving force for NH3 volatilization through diurnal increases in pH.
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  • 26
    ISSN: 0931-1890
    Keywords: Key words Picea abies ; Photosynthesis ; Nitrogen ; Temperature ; Shoot growth
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract  Branches of 30-year-old Norway spruce [Picea abies (L.) Karst.] trees were enclosed in ventilated, transparent plastic bags and flushed with air containing ambient (A≈370 μmol CO2 mol–1) or ambient plus 340 μmol CO2 mol–1 (EL). Light-saturated photosynthesis was on average 56% higher in EL compared to A. Branch phenology and morphology were strongly related to nitrogen concentration (mg g–1 dry mass) in the foliage and to elevated temperatures in the bags, but no direct effect of EL was found. In 1995, budbreak occurred on average 4 days earlier in the bags compared to the control branches, which was partly explained by the temperature elevation in the bags. No nutrient or EL effect on budbreak was found. Increases in temperature and nitrogen supply increased shoot growth: together they explained 76% of the variation in the extension rate, 63% of the variation in extension duration and 65% of the variation in final length of leading shoots. Shoot morphology was altered both by increased nitrogen availability and by the enclosure induced environmental changes inside the bags, leading to reduced mutual shading between needles. Specific needle area (SNA) was lower in EL, but this was related to lower nitrogen concentrations. Total dry mass of the branches was unaffected by EL. It is concluded that treating individual branches of Norway spruce with elevated CO2 does not increase branch growth. The nutrient status of the branch and climate determine its growth, i.e. its sink strength for carbon. Increased export of carbohydrates to the rest of the tree is probable in EL treated branches.
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  • 27
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    Molecular breeding 5 (1999), S. 319-327 
    ISSN: 1572-9788
    Keywords: Cybrid ; cytoplasmic male sterility ; mitochondrial DNA ; protoplast fusion ; rice ; wild abortive cytoplasm
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Wild abortive cytoplasmic male sterility has been extensively used in hybrid seed production in the tropics. Using protoplast fusion between cytoplasmic male sterile and fertile maintainer lines; we report here, transfer of wild abortive cytoplasmic male sterility to the nuclear background of RCPL1-2C, an advance breeding line which also served as maintainer of this cytoplasm. In total, 27 putative cybrids between V20A and RCPL1-2C and 23 lines between V20A and V20B were recovered and all of them were sterile. DNA blots prepared from the mitochondrial DNA of the cybrid lines from both the sets were probed with orf155 that is known to exhibit polymorphism between the mitochondrial DNA of the male-sterile and fertile maintainer lines. Hybridization of orf155 to 1.3 kb HindIII-digested mitochondrial DNA fragment of the cybrids showed transfer of mitochondrial DNA from wild abortive cytoplasmic male-sterile line to the maintainers, viz. RCPL 1-2C and V20B. Expression of male sterility was confirmed by the presence of sterile pollen grains and the lack of seed setting due to selfing in all the cybrid lines. These cybrids, on crossing with respective fertile maintainers set seeds that in turn, produced sterile BC1 plants. DNA blots from HindIII-digested mitochondrial DNA of these BC1 plants when probed with orf155 again exhibited localization of orf155 in wild abortive cytoplasm-specific 1.3 kb HindIII-digested mitochondrial DNA fragments. This demonstrated that the cytoplasmic male sterility transferred through protoplast fusion retained intact female fertility and was inherited and expressed in BC1 plants. Fusion-derived CMS lines, on pollination with pollen grains from restorer, showed restoration of fertility in all the lines. The results demonstrate that protoplasts fusion can be used for transferring maternally inherited traits like cytoplasmic male sterility to the desired nuclear background which can, in turn, be used in hybrid seed production programme of rice in the tropical world.
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  • 28
    ISSN: 1573-5060
    Keywords: rice ; Oryza sativa L. ; photoperiod sensitive genic male sterility (PGMS) ; protoplasts ; flow cytometry ; tetraploid
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Plants were regenerated from protoplasts isolated from embryonic suspension cultures of N5047S, a photoperiod sensitive genic male sterile (PGMS) Japonica rice line. Flow cytometric analyses of nuclear DNA content identified some tetraploid regenerates whose agronomic traits could be distinguished from diploid regenerates. Pollen and female fertility of diploid protoplast-derived clones grown under different light and temperature conditions was compared. A promising PGMS protoplast clone, ZAU11S, was developed from these clones. Its male sterility was confirmed as a photoperiod × temperature interaction type.
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  • 29
    ISSN: 1573-5060
    Keywords: Bph-1 ; linkage analysis ; mapping ; RAPD ; RFLP ; rice
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract We report the tagging of a brown planthopper (BPH) resistance gene (Bph–1) in rice using RAPD and RFLP markers. The Korean rice variety ‘Gayabyeo’ has dominant duplicate genes including Bph–1 conferring resistance to biotype 1 of BPH. Bulked segregant RAPD analysis was employed for rapid identification of DNA markers linked to resistance genes. For tagging these two genes, an F2F3 population from a ‘Gayabyeo’ × ‘Nagdongbyeo’ cross was developed and evaluated for BPH resistance. Three bulked DNAs from two groups of homozygous BPH resistant (each for Bph–1 and the other unknown gene) and homozygous susceptible F2 plants were analyzed by RAPD using 140 random oligomers. One primer, OPD–7 yielded a 700-bp fragment that was present in Gayabyeo and resistant F2 plants (homozygous for Bph-1 locus) but absent in Nagdongbyeo and susceptible F2 plants. Cosegregation of this marker with Bph-1 was verified using an F2 population segregating for Bph-1. Chromosomal regions surrounding the Bph-1 were examined with additional RFLP and microsatellite markers on chromosome 12 to define the location of the RAPD marker and Bph-1. Use of this RAPD marker could facilitate early selection of resistant lines for BPH.
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  • 30
    ISSN: 1573-5060
    Keywords: microsatellite ; Oryza sativa ; polymorphism ; rice
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Ten microsatellite loci were analysed for 43 cultivars or breeding lines of rice. Polymorphism-Information-Content values ranged from 0.62 to 0.92. The microsatellite markers were found to be useful for cultivar identification and assessment of genetic relationships. Most of the cultivars could be uniquely identified by at least one microsatellite marker. Genetic heterogeneity was detected within rice samples by amplification of microsatellites from DNA extracted from multiple individual plants and also from bulked DNA preparations.
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  • 31
    ISSN: 1573-5060
    Keywords: doubled haploids ; genetics ; haploids ; induced variation ; Oryza sativa ; ovary culture ; rice
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Plants derived from unpollinated ovary culture of ten rice genotypes showed significant variability in agro-morphological characteristics. The ovary-derived plant (H1) populations were completely haploid, doubled haploid or haploid-doubled haploid mixture. Haploids had very drastic reduction in plant height, panicle length, grain length, breadth and number and spikelet fertility (0.0%–2.1%). Doubled haploids from the hybrid of UPRI 95–121 × UPRI 95–165 were normal with fertility ranging between 69.6% and 97.7%. A genetic segregation in ratio of 1:1 was observed for five pigmentation characters in the H1 population derived from hybrid UPRI 95–122 × UPRI 95–165. Plant height showed the largest coefficient of variability (28.5%) followed by the number of spikelets per panicle (24.2%), number of grains per panicle (22.0%), percent seed set (9.2%) and panicle length (9.0%). The range of variation in the H1 population from fully fertile hybrid PMS 2A (CMS) × IR 31802 (restorer) was similar to its corresponding F2 population for plant height, spikelet fertility and number of grains/panicle. A single clone of plants from the cultivar BG 1321 exhibited complete male sterility but normal female fertility when pollinated with other varieties. Ovary-derived plants from the CMS lines PMS 2A and IR 58025A showed stable male sterility and those from thermosensitive genetic male sterile line UPRI 95–140 showed thermosensitive genetic male sterility. These lines have potential in the hybrid breeding program and are being currently exploited.
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  • 32
    ISSN: 1573-5036
    Keywords: 14C-urea ; flooded soil ; molecular urea ; 15N-urea ; rice
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract A pot experiment was conducted with rice to study the relative absorption of urea in molecular form compared to the other forms of N produced in soil from the applied urea. A method involving application of 14C-labelled urea and 15N-labelled urea alternately in two splits was used to quantify the absorption of molecular urea and other forms of N formed from it. Biomass production and N uptake were greater in plants grown under flooded soil conditions than in plants grown under non-flooded (upland) conditions. Absorption of N by rice increased with increasing rate of urea application up to 250 mg pot−1 and declined thereafter. The absorption of urea from the flooded soil constituted 9.4% of total N uptake from applied N compared to only 0.2% from the non-flooded. Under submerged conditions, absorption of urea from topdressing was about twice that from basal application at planting. High water solubility of the fertilizer and better developed rice root system might have enhanced the absorption of molecular urea by flooded rice, especially from topdressing. Thus, in the flooded rice system, the direct absorption of molecular urea from topdressing accounted for 6.3% of the total N uptake from added urea. Under upland condition, it was 0.12%.
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  • 33
    ISSN: 1573-5036
    Keywords: deficiency ; hydroponic ; iodate ; iodide ; iodine ; rice
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract In the Xinjiang province of western China, conventional methods of iodine (I) supplementation (i.e, goiter pills and iodinated salt) used to mitigate I deficiencies were ineffectual. However, the recent addition of KIO3 to irrigation waters has proven effective. This study was conducted to determine the effects of I form and concentration on rice (Oryza sativa L.) growth, I partitioning within the plant, and ultimately to assist in establishing guidelines for incorporating I into the human food chain. We compared IO3 − vs. I− in order to determine how these chemical species differ in their biological effects. Rice was grown in 48 L aerated tubs containing nutrient solution and IO3 − or I− at 0, 1, 10, or 100 μM concentrations (approximately 0, 0.1, 1, and 10 mg kg−1 I). The IO3 − at 1 and 10 μM had no effect on biomass yields, and the 100 μM treatment had a small negative effect. The I− at 10 and 100 μM was detrimental to biomass yields. The IO3 − treatments had more I partitioning to the roots (56%) on average than did the I− treatments (36%), suggesting differences in uptake or translocation between I forms. The data support the theory that IO3 − is electrochemically or biologically reduced to I− prior to plant uptake. None of the treatments provided sufficient I in the seed to meet human dietary requirements. The I concentration found in straw at 100 μM IO3 − was several times greater than seed, and could provide an indirect source of dietary I via livestock feeding on the straw.
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  • 34
    ISSN: 1573-5060
    Keywords: AFLP ; DNA fingerprinting ; isozymes ; RAPD ; rice
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract A survey of the genetic diversity among the major cuban rice cultivars was conducted using isozyme, RAPD and AFLP markers. Polymorphisms were detected for esterases, peroxidases, alcohol dehydrogenases and polyphenoloxidases systems; 21 RAPD primers and four AFLP primer combinations. Heterozygosity arithmetic mean value (Hav(p)), the effective multiplex ratio (EMR) and the marker index (MI), were calculated for isozyme, RAPD and AFLP markers. The mean value of genetic similarity among the different varieties was 0.92 for isozyme, 0.73 for RAPD and 0.58 for AFLP analyses. Thus, AFLP were able to detect polymorphisms with higher efficiency than RAPD (+15%) and isozyme (+34%). Data from the isozyme, RAPD and AFLP analyses were used to compute matrices of genetic similarities. The efficiency of the UPGMA for the estimation of genetic relatedness among varieties was supported by cophenetic correlation coefficients. The resulting values indicated that the distortion level for the estimated similarities was minimal. The correlation coefficients obtained by the Mantel matrix correspondence test, which was used to compare the cophenetic matrices for the different markers, showed that estimated values of genetic relationship given for isozyme and RAPD markers (r = 0.89), as well as for AFLP and RAPD markers (r = 0.82) were properly related. However, AFLP and isozyme data showed only moderate correlation (r = 0.63). Although the genetic variability found among the different cultivars was low, both RAPD and AFLP markers proved to be efficient tools in assessing the genetic diversity of rice genotypes.
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    Plant growth regulation 28 (1999), S. 29-39 
    ISSN: 1573-5087
    Keywords: anther ; sugars ; ethylene inhibitors ; correlative signal ; rice ; spikelet
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Rice (Oryza sativa L. cv. Lalat) was grown in pots under open field conditions during the wet season of 1997. Attempts were made to manipulate the growth and development of the male gametophyte, located on the basal region of the panicle, by exogenous application of chemicals regulating formation/action of ethylene and compare grain setting in the spikelets bearing few grain. Application of ethylene action (AgNO3) and synthesis inhibitor (Co(NO3)2; paclobutrazol and uniconazole) improved grain setting in the spikelets and the ethylene releasing substance 2-chloroethyle phosphonic acid (CEPA) depressed it compared to the control. The ethylene inhibitors promoted dry mass accumulation and concentrations of starch and reducing sugars in the anthers of the basal spikelets, while CEPA reduced the level of these carbohydrates significantly. The ethylene inhibitors helped in the survival of more numbers of pollen in these anthers, but CEPA depressed their number significantly. Promotion of growth of the basal anthers was accompanied by a concomitant reduction in the concentration of nonreducing sugars and enhanced activities of acid invertase and sucrose synthase enzymes. It is concluded that male gametophyte development of the basal spikelets of rice is susceptible to ethylene at the stage of pollen mitosis. The possibility of the hormone interfering in carbohydrate metabolism of the anther during this stage of development is discussed.
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  • 36
    ISSN: 1573-5087
    Keywords: 1-aminocyclopropane-1-carboxylate (ACC) oxidase ; ethylene ; Oryza sativa ; ozone ; rice
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Exposure to ozone at 1 µl l−1 for 6 h induced ethylene production in rice (Oryza sativa L. cv. Hitomebore) leaves. The stimulation of ethylene production was detectable 2 h after the start of the exposure to ozone, and lasted for 6 h after the exposure. A 429-bp cDNA fragment encoding ACC oxidase was obtained by RT-PCR from ozone-treated rice leaves. Its nucleotide sequence and deduced amino-acid sequence had 97.2% and 94.4% identity, respectively, to those of OS1A1COX, which was previously obtained from deepwater rice. The abundance of the cDNA increased in accordance with the induction of ethylene production by the exposure to ozone.
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  • 37
    ISSN: 1573-5087
    Keywords: 2,6-diisopropylphenoxyacetic acid ; gibberellin ; Oryza sativa ; rice ; shoot elongation ; uniconazole
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract 2,6-Diisopropylphenoxyacetic acid (DIPA), a promoter of growth and flowering of Sagittaria species, was found to improve the shoot growth of rice plants treated with uniconazole, an inhibitor of gibberellin (GA) biosynthesis. In a modified micro-drop bioassay using semi-dwarf rice, Oryza sativa L. cv. Tan-ginbozu, in which uniconazole had been incorporated into the agar medium, a significant recovery from growth inhibition was observed for both the 3rd and the 4th leaf sheaths but not for the 2nd sheath. In greenhouse experiments, uniconazole-treated rice plants partially recovered from growth inhibition when DIPA was applied after uniconazole treatment, whereas DIPA applied with, or before, uniconazole treatment did not improve growth. The levels of GA1 and GA20 in the rice plants treated with uniconazole plus DIPA were almost equal to those of the untreated controls, indicating that the observed growth recovery is attributable to the restoration of GA biosynthesis by DIPA.
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  • 38
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    Genetic resources and crop evolution 46 (1999), S. 587-598 
    ISSN: 1573-5109
    Keywords: diversity ; genetic resources ; GIS ; Oryza sativa ; RAPD ; rice
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract A diverse set of 115 rice varieties from Bangladesh was surveyed using 35 polymorphic RAPD (randomly amplified polymorphic DNA) markers and the genetic structure of this germplasm, encompassing the principal rice ecotypes of Bangladesh (aus, aman and boro), was determined using multivariate analysis. The level of genetic diversity was evaluated and compared with the levels of diversity found within other rice growing areas of the world. Geographical information systems analysis using Atlas-GIS was employed to analyse and present the geographic distribution of genetic diversity across Bangladesh, and cluster analysis was used to test the efficiency of selection of material for a core collection.
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  • 39
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    Nutrient cycling in agroecosystems 53 (1999), S. 229-235 
    ISSN: 1573-0867
    Keywords: controlling factor ; diel methane emission pattern ; dissolved methane ; rice ; soil temperature
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Methane emissions from flooded rice grown under greenhouse conditions were monitored using a closed chamber technique. The three rice cultivars showed similar diel emission patterns though the amplitudes differed. Variation in emissions (maximum emission rate) from the different cultivars ranged from 0.164–0.241 mg/pot/h at tillering stage, 0.714–2.334 mg/pot/h at heading stage, 0.399–1.393 mg/pot/h at ripening stage. The methane emissions increased in the morning at accelerating rates, reached a maximum in the early afternoon, then decreased rapidly to constant rates during the night. The diel emission pattern was modeled using a Gaussian equation for daytime, and a constant for nocturnal emissions. Applying an Arrhenius equation, more than 90% of the diel variation of methane emissions could be predicted from soil temperature fluctuations. The predictions improved by using a diffusion model based on soil temperature and dissolved methane concentrations in soil solution. Soil temperature and methane concentration in soil solution are the two major factors controlling diel methane emissions.
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  • 40
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    Plant and soil 216 (1999), S. 83-91 
    ISSN: 1573-5036
    Keywords: Cunninghamia lanceolata ; Fertilization ; Nutrient loading ; Nitrogen ; Retranslocation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Nutrient loaded and non-loaded Chinese fir (Cunninghamia lanceolata (Lamb) Hook) seedlings were transplanted in a pot trial to examine effects of exponential nutrient loading and fertilization treatments on first season growth and N nutrition. The treatments tested four rates of N (0, 30, 60, and 90 mg tree-1) as a mixed NPK fertilizer applied before planting to create a soil fertility gradient, and two topdressings applied only to non-loaded seedlings later in the season. Nutrient loading alone consistently enhanced seedling growth on the four soil fertility classes, increasing respective biomass and N uptake 42, 45, 20 and 8%, and 65, 67, 29 and 18% more than non-loaded seedlings. The positive response was attributed to increased N retranslocation from higher nutrient reserves built up by loading during nursery culture. Net retranslocation from old shoots to new growth was highest soon after planting when nutrient stress was most severe. Pre-plant soil fertilization and post-plant topdressings were also effective in promoting seedling productivity, but equivalent additions yielded less biomass than that from nutrient loading alone. Implications are that exponential nutrient loading may be more efficient in improving early growth performance of Chinese fir seedlings than traditional field fertilization practices at plantation establishment, and may on competitive sites avoid problems of stimulating surrounding vegetation rather than trees.
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  • 41
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    Plant and soil 216 (1999), S. 117-127 
    ISSN: 1573-5036
    Keywords: image analysis ; NIH Image ; rice ; root length
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Algorithms for estimating root length by image analysis should lead to results that have no systematic error (bias), be insensitive to preferential root orientation, valid across a wide range of sample sizes and adjust for overlap between roots in samples, to reduce the effort needed in spreading out root systems. We propose a new algorithm that forms a compromise between small bias and robustness (insensitivity to variation in sample size and preferential root orientation), and provide a simple way of dealing with root overlap. Image analysis was performed on a Macintosh computer using the public domain NIH Image program. The digital image of the root was processed to get the thinned image (skeleton). The numbers of orthogonally and diagonally connected pairs of pixels (N o and N d, respectively) in the skeleton were counted separately and used for length (L) calculation. A new length calculation equation was introduced so that the effect of orientation on length calculation was minimized; L=[N d 2+(N d+N o/2)2]1/2+N o/2. The maximum error due to orientation of a single line was evaluated for an ideal line, and the analysis revealed that the new equation was less affected by orientation than previous equations. Copper wire and rice (Oryza sativa L.) roots containing both primary and fine secondary root were measured manually and with image analysis. The two methods showed good agreement within 1.5%. The proposed image analysis method yielded length estimates with CV from 0.23 to 0.88%, which was lower than the CVs of the line-intersect method. Moreover, the lengths of overlapping samples were calculated correctly because the image analysis method distinguished an overlapping pixel from a thinned image, while the calculation with the line-intersect method showed underestimation because overlaps were not considered in that method.
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  • 42
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    European journal of plant pathology 105 (1999), S. 743-751 
    ISSN: 1573-8469
    Keywords: rice ; rice bacterial blight ; Xanthomonas oryzae ; pv. oryzae ; virulence analysis ; environmental effects ; phylogeny
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Eight Philippine races of Xanthomonas oryzae pv. oryzae have been identified based on virulence phenotypes observed on a set of five differential varieties. One of these, Race 3, was found to consist of two phylogenetically distinct lineages based on DNA fingerprinting analysis. To determine, if the two lineages could be differentiated based on host-specificity, 186 strains of Race 3 were analyzed with additional fingerprints and 76 selected isolates with additional differential rice varieties. The strains were separated into 36 haplotypes clustering in three groups (IS1113-B, -C, and -G) at the 75% similarity level. Isolates varied in their reaction to a rice line carrying the resistance gene Xa7, however, the variability was not consistent within lineage. Aggressiveness of isolates belonging to lineage IS1113-B and -G was significantly greater when tested during the dry season than when tested during the wet season. However, no such differences were evident for isolates from lineage IS1113-C, indicating that environmental effects presumably light and temperature are genotype-specific.
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    Biology and fertility of soils 26 (1998), S. 243-249 
    ISSN: 1432-0789
    Keywords: Key words Earthworm middens ; Soil ; Carbon ; Nitrogen ; Microbial activity
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Earthworm activity may be an important cause of spatial and temporal heterogeneity of soil properties in agroecosystems. Structures known as “earthworm middens,” formed at the soil surface by the feeding and casting activities of some earthworms, may contribute significantly to this heterogeneity. We compared the temporal dynamics of carbon (C), nitrogen (N), and microbial acitivity in Lumbricus terrestris middens and in surrounding non-midden (bulk) soil during the spring, when seasonal earthworm activity was high. We sampled soil from middens and bulk soil in a no-till cornfield on four dates during May and June 1995. Soil water content and the weight of coarse organic litter (〉2mm) were consistently higher in middens than in bulk soil. Total C and N concentrations, C:N ratios, and microbial activity also were greatest in midden soil. Concentrations of ammonium-nitrogen and dissolved organic N were greater in middens than in bulk soil on most dates, suggesting accelerated decomposition and mineralization in middens. However, concentrations of nitrate were usually lower in middens, indicating reduced nitrification or increased leaching and denitrification losses from middens, relative to bulk soil. Fungal activity, as well as total microbial activity, was consistently greater in middens. The contribution of fungae to overall microbial activity differed significantly between middens and bulk soil only on one date when both soils were very dry; the contribution of fungae to microbial activity was lower in the middens on this date. We conclude that the midden-forming activity of L. terrestris can be a major determinant of spatial heterogeneity in some agricultural soils, and that this can potentially affect overall rates of soil processes such as organic matter decomposition, N mineralization, denitrification, and leaching.
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    Biology and fertility of soils 26 (1998), S. 258-267 
    ISSN: 1432-0789
    Keywords: Key words Decomposition ; Deposition ; Nitrogen ; saturation ; Pinus sylvestris ; Soil biota
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Wekerom forest shows a high nitrogen (N) load, and the first signs of N saturation. This characterization is based on the high N content of the needles, the high nitrate-N (NO3-N) mobilization and low cation mobilization from the organic horizon. The N cycle in this forest has been transformed into an „open flow” system, in which the ammonium-N, deposited in large quantities from the atmosphere, is transformed into NO3-N, which is leached into the groundwater. Decomposition of deeper organic layers, such as the fragmented litter and humus layers, is thought to provide additional NH4-N, which explains the high NO3-N output. Together with a reduction in the number and vitality of the pine trees, there is an increase in the number of nitrophilous plants, such as Deschampsia flexuosa and Rumex acetosella. The ectomycorrhizal and litter-decaying fungi are specific, N-resistant species. Soil fauna are classified as common inhabitants of dry, acid, nutrient poor forests.
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  • 45
    ISSN: 1432-0789
    Keywords: Key words Collembola ; Acari ; Araneae ; Nitrogen ; Stratification
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract This paper addresses the abundance, biomass and microstratification of functional groups of micro- and mesoarthropods inhabiting the organic layers of a Scots pine forest (Pinus sylvestris L.). An experiment using stratified litterbags, containing organic material of four degradation stages, i.e., freshly fallen litter, litter, fragmented litter and humus, was performed over a period of 2.5 years. Statistical data analysis revealed that each organic layer had a different, characteristic species composition that changed with time following successive degradation stages. Species of Acari, Araneae and Collembola were assigned to different functional groups based on taxonomy, microstratification, food type or feeding mode. The abundance and biomass carbon of functional groups were dependent on the organic layer and most functional groups showed a particular preference for one of the upper organic layers. Temporal and spatial differences in density and biomass carbon of functional groups could partly be related to fluctuations in the soil climate, although effects of trophic interactions could not be ruled out. A general decline in abundance and biomass, especially in populations of fungal feeders, during the last year of the study could not be explained by a reduction in litterbag volume, changed litter chemistry or soil climate, but was attributed to an indirect effect of a remarkable increase in soil coverage by wavy hair grass, Deschampsia flexuosa (L.). The analysis demonstrated that species diversity, microhabitat specification, soil fauna succession, and degradation stages of organic material are interrelated. The results obtained indicate that both the chemistry of organic matter and decomposition rates have an important effect on trophic relationships and community structure.
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  • 46
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    Biology and fertility of soils 26 (1998), S. 313-322 
    ISSN: 1432-0789
    Keywords: Key words Fungi ; Bacteria ; Nitrogen ; Scots pine ; Stratification
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The abundance and micro-stratification of bacteria and fungi inhabiting the organic layers of a Scots pine forest (Pinus sylvestris L.) were investigated. An experiment using stratified litterbags, containing organic material of four degradation stages (fresh litter, litter, fragmented litter and humus) was performed over a period of 2.5 years. Dynamics and stratification of fluorescent stained bacteria and fungi, ratios between bacterial and fungal biomass, and relationships with moisture and temperature are described. Average bacterial counts in litter and fragmented litter were similar, i.e., approximately 5×109 bacteriag–1 (dry weight) organic matter, and significantly exceeded those in humus. The mean bacterial biomass ranged from 0.338 to 0.252mg carbon (C) g–1 (dry weight) organic matter. Lengths of mycelia were significantly below the usually recorded amounts for comparable temperate coniferous forests. The highest average hyphal length, 53mg–1 (dry weight) organic matter, was recorded in litter and decreased significantly with depth. The corresponding mean fungal biomass ranged from 0.050 to 0.009mg Cg–1 (dry weight). The abundance of bacteria and fungi was influenced by water content, that of fungi also by temperature. A litterbag series with freshly fallen litter of standard quality, renewed bimonthly, revealed a clear seasonal pattern with microbial biomass peaks in winter. The mean hyphal length was 104mg–1 (dry weight) and mean number of bacteria, 2.40×109 bacteria g–1 (dry weight). Comparable bacterial and fungal biomass C were found in the freshly fallen litter [0.154 and 0.132mgCg–1 (dry weight) organic material, respectively]. The ratio of bacterial-to-fungal biomass C increased from 1.2 in fresh litter to 28.0 in humus. The results indicate the existence of an environmental stress factor affecting the abundance of fungi in the second phase of decomposition. High atmospheric nitrogen deposition is discussed as a prime factor to explain low fungal biomass and the relatively short lengths of fungal hyphae in some of the forest soil layers under study.
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  • 47
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    Biology and fertility of soils 28 (1998), S. 56-63 
    ISSN: 1432-0789
    Keywords: Key words Animal manure ; Immobilization ; Mineralization ; Nitrogen ; Slurry distribution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract  An improved understanding of the cycling of animal manure N is a prerequisite for making better use of this N source. A sheep was fed 15N-labelled grass in order to study the fate of 15N-labelled ruminant manure N in the plant-soil system. The uniformity of labelling was found to be satisfactory when an appropriate feeding strategy was used. The mineralization of labelled faecal N was compared to the mineralization of labelled feed N and indigestible feed N by measuring residual labelled organic N in unplanted topsoil in the field. After 18 months, 61% of both faecal N and feed N was recovered in organic form in the topsoil, while 94% of the indigestible feed N was still present in the soil. The influence of slurry distribution in soil on the crop uptake of labelled faecal N in slurry was studied in a sandy and a sandy loam soil. The crop uptake of labelled faecal N was compared with the uptake of 15N-labelled mineral fertilizer in a reference treatment. The uptake was 28–32% of that of the reference treatment with simulated slurry injection, 13–25% with incorporated slurry and 18–19% with slurry on the soil surface. The mineralization of faecal N in the autumn after application in spring was low irrespective of the slurry distribution in soil. The results demonstrate that the contact between animal manure and the soil matrix significantly influences the short-term turnover and availability of faecal and ammonium N in slurry, especially in fine-textured soils.
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  • 48
    ISSN: 1432-0789
    Keywords: Key words Methane oxidation ; Nitrogen ; Fertilizer ; Soils ; Isotopic dilution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract  The short-term effects of N addition on CH4 oxidation were studied in two soils. Both sites are unfertilized, one has been under long-term arable rotation, the other is a grassland that has been cut for hay for the past 125 years. The sites showed clear differences in their capacity to oxidise CH4, the arable soil oxidised CH4 at a rate of 0.013 μg CH4 kg–1 h–1 and the grassland soil approximately an order of magnitude quicker. In both sites the addition of (NH4)2SO4 caused an immediate reduction in the rate of atmospheric CH4 oxidation approximately in inverse proportion to the amount of NH4 + added. The addition of KNO3 caused no change in the rate of CH4 oxidation in the arable soil, but in the grassland soil after 9 days the rate of CH4 oxidation had decreased from 0.22 μg CH4 kg–1 h–1 to 0.13 μg CH4 kg–1 h–1 in soil treated with the equivalent of 192 kg N ha–1. A 15N isotopic dilution technique was used to investigate the role of nitrifiers in regulating CH4 oxidation. The arable soil showed a low rate of gross N mineralisation (0.67 mg N kg–1 day–1), but a relatively high proportion of the mineralised N was nitrified. The grassland soil had a high rate of gross N mineralisation (18.28 mg N kg–1 day–1), but negligible nitrification activity. It is hypothesised that since there was virtually no nitrification in the grassland soil then CH4 oxidation at this site must be methanotroph mediated.
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  • 49
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    Biology and fertility of soils 27 (1998), S. 279-283 
    ISSN: 1432-0789
    Keywords: Key words Peats ; Methane ; Nitrogen ; Land use ; Agriculture
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract  Rates of methane uptake were measured in incubation studies with intact cores from adjacent fenland peats that have been under arable management and woodland management for at least the past 30 years. On two separate occasions the woodland peat showed greater rates of uptake than the arable peat. These rates ranged from 23.1 to 223.3 μg CH4 m–2 day–1 for the woodland peat and from 29.6 to 157.6 μg CH4 m–2 day–1 for the arable peat. When the peats were artificially flooded there was a decrease in the rate of methane oxidation, but neither site showed any net efflux of methane. 15N isotopic dilution was used to characterise nitrogen cycling within the two peats. Both showed similar rates of gross nitrogen mineralisation (3.58 mg N kg–1 day–1, arable peat; 3.54 N kg–1 day–1, woodland peat) and ammonium consumption (4.19 arable peat and 4.70 mg N kg–1 day–1 woodland peat). There were significant differences in their inorganic ammonium and nitrate pool sizes, and the rate of gross nitrification was significantly higher in the woodland peat (4.90 mg N kg–1 day–1) compared to the arable peat (1.90 mg N kg–1 day–1). These results are discussed in the light of high atmospheric nitrogen deposition.
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    Nutrient cycling in agroecosystems 51 (1998), S. 269-279 
    ISSN: 1573-0867
    Keywords: denitrification ; gas entrapment ; nitrification inhibitors ; 15N ; rice
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Denitrification rates (d) in a flooded alkaline clay were measured following addition of either $$^{15} NO_3^ - or^{15} NH_4^ + $$ to the floodwater, by collecting evolved N2 + N2O in an enclosure in the absence or presence of rice plants. Similar estimates of d were obtained in the $$^{15} NO_3^ - $$ treatment when the isotopic composition of the enclosed atmosphere was determined using arc redistribution or direct mass spectrometric analysis. Approximately 90% of the gaseous products of denitrification were physically trapped in the soil five days after $$^{15} NO_3^ - $$ addition. Mechanical shaking of the soil-water system was an effective method for releasing entrapped gas. Denitrification showed a marked diurnal variation in both $$^{15} NO_3^ - $$ and $$^{15} NH_4^ + $$ treatments planted to rice, with higher rates during the day than at night. Measured rates of denitrification were higher in planted than in unplanted pots for both $$^{15} NO_3^ - $$ and $$^{15} NH_4^ + $$ treatments for normal gas sampling. However, evidence was obtained that this was not a real effect, but was due to release of entrapped gas. Denitrification losses corrected for gas entrapment were estimated at 〈5% of applied $$^{15} NH_4^ + $$ . The 15N mass balance indicated that a much larger amount of applied ammonium (15–25%) was lost by NH3 volatilisation. The rate of denitrification corrected for gas entrapment was similar to the rate of nitrification estimated by inhibition of ammonium oxidation. Although the inhibitors 2-ethynylpyridine and acetylene prevented denitrification by effectively inhibiting nitrification of $$^{15} NH_4^ + $$ , the total recovery of 15N in the soil-plant system did not increase. The total recovery of $$^{15} NH_4^ + $$ was 7–9% higher in the presence than in the absence of rice.
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    Nutrient cycling in agroecosystems 51 (1998), S. 259-267 
    ISSN: 1573-0867
    Keywords: nitrification ; nitrification inhibitors ; 15N-dilution ; rice
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Nitrification rates (n) in the floodwater of an alkaline clay were measured in the absence or presence of rice plants by inhibition of ammonium oxidation and 15N-dilution techniques. Floodwater nitrate concentrations in control treatments showed a marked diurnal variation, and were higher than in the inhibitor treatments after the first day. Ammonium concentrations in floodwater declined exponentially in all treatments, being markedly affected by diffusion and NH3 volatilization but little affected by nitrification and plant uptake. Nitrification rates in floodwater estimated by 15N-dilution were generally higher than the rates estimated by the inhibitor method. Estimates of n were generally higher during daylight hours than at night, and did not differ significantly between planted and unplanted pots. Microbial immobilisation of labelled ammonium and gross N immobilisation were not affected by addition of the nitrification inhibitor 2-ethynylpyridine.
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    Nutrient cycling in agroecosystems 53 (1998), S. 71-81 
    ISSN: 1573-0867
    Keywords: fallow ; legumes ; nitrogen fixation ; rice ; weeds ; West Africa
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Traditional upland rice-based cropping systems in West Africa rely on periods of fallow to restore soil fertility and prevent the build-up of insect pests and weeds. Demographic growth and increased demand for land is forcing many farmers to intensify their rice production systems. Declining fallow length and increasing number of crops before leaving the land to extended fallow result in a significant yield reduction. Promising cropping system alternatives include the use of site specific, weed-suppressing, multi-purpose cover legumes as short duration fallows. Constraints to rice production related to intensification were determined in 209 farmers' fields in four agro-ecological zones during 1994 and 1995. Nitrogen accumulation and weed suppression were evaluated in 54 legume accessions, grown for six months during the dry season, under a range of hydrological and soil conditions in 1994/95. Their effect on the yield of upland rice was determined in 1995. To increase benefits from improved fallow technology, the timing of legume establishment in relation to rice and the effect on crop and weed growth of removing, burning, mulching, or incorporating fallow residues prior to the rice crop were determined. Intensified land use resulted in a significant plot-level yield reduction that was highest in the derived savanna and the bimodal forest zones where it was associated with a doubling of the weed biomass in rice and a significant reduction in soil N supply. Legume fallows appear to offer the potential to sustain rice yields under intensified cropping. Legume biomass was in most instances significantly greater than in the weedy fallow control and several legume species suppressed weed growth. Nitrogen accumulation by legumes varied between 1–200 kg N ha-1 with 30–90% Ndfa. Rice grain yield following legume fallows increased by an average of 0.2 mg ha-1 or 29% above the weedy fallow control. Relay establishment substantially increased legume biomass. However, seeding of the legume at 28 days or earlier significantly reduced grain yield due to interspecific competition. Incorporating or mulching of fallow residues provided no significant yield advantage as compared to burning. Absolute effects varied as a function of site, legume species, and management practice.
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  • 53
    ISSN: 1573-143X
    Keywords: Cage culture ; Dietary lipid ; Dietary water ; Feeding frequency ; Moist diets ; Nitrogen ; Phosphorus ; Rainbow trout (Oncorhynchus mykiss)
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The nutrient losses into the water from rainbow trout (Oncorhynchus mykiss) cage culture using locally caught low-fat Baltic herring, herring-based moist diets and fishmeal-based dry diets were estimated. Feeding with herring led to nitrogen and phosphorus losses into the water twice as high as those feeding with dry pellets (78–162 versus 37–39 g N and 15–39 versus 7–18 g P per kg growth). This was supported by direct measurements of ammonia and phosphate excretion. Increasing feeding frequencies resulted in increased nutrient losses irrespective of diet. Increasing dietary lipid level had a more pronounced effect in reducing the expected nutrient losses in dry pellets than herring. The reduction within the herring was approximately 18% on average for nitrogen and 25% for phosphorus losses. Dietary water content did not affect the nutrient losses. © Rapid Science Ltd. 1998
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  • 54
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    Plant and soil 200 (1998), S. 169-173 
    ISSN: 1573-5036
    Keywords: ammonium ; copper ; leaf senescence ; rice
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The possibility that ammonium (NH 4 + ) accumulation is linked to the senescence of detached rice (Oryza sativa) leaves induced by copper (Cu) was investigated. CuSO4 was effective in promoting senescence of detached rice leaves. Both CuSO4 and CuCl2 induced NH 4 + accumulation in detached rice leaves, indicating that NH 4 + accumulation is induced by copper. Sulfate salts of Mg, Mn, Zn, and Fe were ineffective in inducing NH 4 + accumulation in detached rice leaves. The senescence of detached rice leaves induced by Cu was found to be prior to NH 4 + accumulation. Free radical scavengers, such as glutathione and thiourea, inhibited senescence caused by Cu and at the same time inhibited Cu-induced NH 4 + accumulation. The current results suggest that NH 4 + accumulation is not associated with senescence induced by Cu, but is part of the overall expression of oxidative damage caused by an excess of Cu. Evidence was presented to show that copper-induced ammonium accumulation in detached rice leaves is attributed to a decrease in glutamine synthetase activity and an increase in reduction of nitrate.
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  • 55
    ISSN: 1573-5060
    Keywords: unpollinated ovary culture ; callus induction ; plant regeneration ; chilling pretreatment ; development stage ; medium composition ; rice ; Oryza sativa
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract A simple and efficient technique for in vitro unpollinated ovary culture in rice which is also applicable for indica genotypes was developed for breeding and genetic studies. Sampling explants at the auricle distance of 7–12 cm between the two uppermost leaves of a tiller, providing a chilling pretreatment and ovaries with 1/3 of the hulls intact gave optimum response to culture. For callus induction with the spontaneous breaking of ovaries, N6 media supplemented with NAA (2 mg/l) and DMSO (0.6–0.8%) gave a mean PCI value of 3.8% and range of 0.8–12.5% among genotypes. Media combining 2,4,5-T or 2,4-D with NAA in N6 medium also has reasonably good callus induction. For calli induced inside, 2,4-D (0.2–0.5 mg/l), NAA (2 mg/l) and KT (1 mg/l) contained media were superior. The maximum green plant regeneration (PPR) of 77.3% was found with the medium containing NAA 0.25 mg/l, IAA 0.5 mg/l and KT 2.0 mg/l. Significant genotype, medium and their interaction effects for per cent ovary survival and callus induction were observed.
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  • 56
    ISSN: 1573-5036
    Keywords: agar ; agarose ; gels ; mechanical impedance ; Oryza sativa ; rice
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Agar and agarose gels were evaluated as systems to mechanically impede roots of rice (Oryza sativa L.). Two-layer gels were used so that seedlings established in a layer of weak gel (0.35% weight/volume) and then grew downwards to encounter a treatment gel of up to 5.0% (w/v). Agarose gels were stronger than agar gels of the same concentration, reaching a maximum penetrometer resistance of 1.2 MPa at a concentration of 5.0%, compared to 0.3 MPa with agar. The 5.0% agar gel stimulated elongation of the seminal axis by 40% in seedlings of variety TN1 (compared with elongation in the 0.2% gel), but decreased it by 15% in the variety Lac 23. Although increasing agarose concentration decreased seminal axis elongation in both varieties, the seminal axis did not reach the lower layer of treatment gel when the concentration of the treatment gel was greater than 2.0%. The decreased root elongation was therefore a non-mechanical inhibition. In experiments conducted using a different batch of agarose, these inhibitory effects were not seen and strong agarose gels stimulated seminal axis elongation. It was concluded that the agar and agarose gel systems studied were unsuitable for studying the effect of mechanical impedance on the elongation of rice roots and that great care should be taken in interpreting the results of experiments using gels as a growth medium.
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  • 57
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    Plant and soil 203 (1998), S. 269-277 
    ISSN: 1573-5036
    Keywords: fertilization ; pH ; phosphorus ; rice ; sodicity ; sodium
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Rice seedlings transplanted into sodic soil are exposed to an excess of potentially toxic ions as well as nutritional imbalance, both of which adversely affect their growth and yield. The present study was aimed to investigate the beneficial effects of fertilization with phosphorus and potassium on the plants at varying sodicity levels and also the response of genotypes with known variability in their tolerance to sodicity. In pot-house experiments during two seasons, the alleviating effects of P and K fertilization on three rice genotypes were examined at four sodicity levels. Seedlings of CSR13 and Jaya (both moderately tolerant to sodicity), died by 25–35 days after transplanting in sodic soils of pH 9.7–9.9 where Olsen's P was 12.5 and 14.8 kg/ha, respectively. However, there was no problem of survival or growth in these soils when Olsen's P was 17.6 and 20.8 kg/ha. Depletion in P from 12.0 kg to 10 kg resulted in some mortality of the seedlings even at pH 9.1. Sodicity tolerant genotype CSR10, did show some survival and growth even at pH 9.9 with Olsen's P at 14.8 kg/ha (without P fertilization) which suggests that differences in tolerance to sodicity which exist at genotypic level are not masked by low P. None of the three genotypes showed any survival problem at pH 8.0 and 8.1 with Olsen's P at 8.5 and 8.7 kg/ha, respectively. Seedlings in P fertilized sodic soils not only produced significantly more new roots but also higher root biomass than those in unfertilized sodic soils and these roots seem to have some control on Na uptake as reflected by low Na concentration in the shoots. Thus, P fertilization not only improved P and K status of plants but also reduced the concentration of potentially toxic Na ions in shoots, resulting in better survival, growth and yield. Although fertilization with K alone did improve shoot K content, it had no significant effect on reducing Na. So the mortality of the seedlings or grain yield in K fertilized sodic soils was as good as in control and this could be explained on the basis of lack of any significant difference in Na concentrations in shoots between these two treatments.
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  • 58
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    Euphytica 101 (1998), S. 151-156 
    ISSN: 1573-5060
    Keywords: Oryza sativa L. ; rice ; pure lines ; hybrids ; rough rice yield ; head rice ; total milled rice ; selection index ; path analysis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract High rough rice yields are important for the profitable production of rice (Oryza sativa L.). The value of rough rice is determined primarily by head rice (whole milled grains) and broken rice, together referred to as total milled rice. The objective of this study was to optimize selection for rough rice yield, head rice, and total milled rice using path-coefficient analysis and selection indices. Thirty-seven long grain pure lines were grown in an experiment at three Arkansas locations during 1993 and 1994. In another test, twenty-eight F1 hybrids obtained from an eight-parent half diallel of long-grain rices were grown at two locations in Arkansas during 1991. For the pure lines, path analysis revealed that rough rice yield was approximately twice as important in determining total milled rice/ha than head rice. Path analysis for the hybrids revealed that rough rice yield was an even greater component in determining total milled rice/ha. Based on yield components for hybrid rice, panicle density had the largest direct effect determining total milled rice/ha. Filled grain/panicle, grain weight, and head rice, in that order, were secondary, but positive, factors determining total milled rice/ha. A selection index for pure lines based only on selection for head rice was 19.2 percent as effective as selection for total milled rice/ha directly. When selection for total milled rice/ha was based solely on rough rice yield, selection was 82.7 percent as effective as selecting for total milled rice/ha directly. Selection to improve total milled rice/ha should concentrate on increasing both rough rice yield and head rice. Rough rice yield should receive greater priority than head rice in selection strategies.
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  • 59
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    Genetic resources and crop evolution 45 (1998), S. 399-406 
    ISSN: 1573-5109
    Keywords: internal transcribed spacer sequences ; nuclear ribosomal RNA genes ; molecular phylogeny ; Potamophila parviflora ; Oryza sativa ; rice
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Potamophila parviflora is a wild relative of rice from Eastern Australia. The species was found in the Richmond, Clarence, Macleay and Hastings River systems of northern New South Wales. Existing populations had wider leaves (10–15 mM) than those previously reported (4–6 mM). This species and North American wild rice, Zizania palustris were investigated as genetic resource for rice improvement. Both species, Potamophila , and Zizania , occur in colder climates than rice (Oryza sativa). Sequencing of the ITS1 of the ribosomal genes of these two species indicated that Zizania and Potamophila were more closely related to each other than either was to Oryza sativa. Potamophila has a similar number of chromosomes (n=12) and a greater sequence homology to rice and may thus be a better source of useful genes for rice improvement.
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  • 60
    ISSN: 1573-5087
    Keywords: chilling tolerance ; fatty acids ; galactolipids ; phospholipids ; rice ; somaclonal variation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The relationship between chilling tolerance of six rice cultivars – Facagro 57, Facagro 76, Fujisaka 5, Kirundo 3, Kirundo 9 and IR64 -and the fatty acid composition in total lipids, phospholipids, galactolipids and neutral lipids from leaves was studied. Higher double bond index and proportions of linolenic acid in the phospholipid and galactolipid classes were related to cultivar chilling tolerance, but this was not so for the total lipids nor the neutral lipid class. The somaclonal families derived from Facagro 76, Kirundo 3 and Kirundo 9 that showed enhanced chilling tolerance as compared to their original parental cultivar were analyzed for fatty acid composition in phospholipids and galactolipids from leaves. Altered proportions in fatty acid composition in phospholipids, galactolipids or both were found in the somaclonal families derived from Facagro 76 and Kirundo 9, but not from Kirundo 3. These changes most usually resulted in higher double bond index and higher proportions in linoleic and linolenic acids which were related either to lower ratio of C16 to C18 fatty acids or to higher unsaturation in the C18 fatty acid fraction. Different mechanisms thus seem to be implicated in the altered fatty acid composition of somaclones, which may be related to the chilling tolerance improvement of some somaclonal families.
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  • 61
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    Euphytica 102 (1998), S. 151-161 
    ISSN: 1573-5060
    Keywords: Oryza sativa ; head rice ; seeding date ; rice ; rough rice yield ; stability
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The rice (Oryza sativa L.) crop in Arkansas is seeded from late March through early June each year. Farmers need new rice cultivars that not only produce both high rough rice yields and high head rice across this range of seeding dates but do so consistently. Thus, a seeding date study was conducted during 1994 and 1995 at Stuttgart, Arkansas, to study seeding date effects on rough rice yield and head rice and selection for stability. Fourteen rice cultivars were seeded at five dates ranging from late March through mid-June. Kang's yield-stability statistic was used to select cultivars for both high rough rice yields and high head rice as well as stability for both traits. Plant stands from March seedings of each year were significantly lower than for the later seeding dates. Maturity (days to 50 percent heading) was extended at the early seeding dates. Some rice cultivars, such as ‘LaGrue’, had lower and more variable head rice when seeded early. In the June seeding dates each year, ‘Kaybonnet’ produced rough rice yields that were more consistent with yields when planted at the earlier planting dates. ‘Bengal’, ‘Cypress’, ‘Kaybonnet’, and ‘Newbonnet’ were cultivars selected by Kang's stability statistic, which was targeted to select cultivars with stable, high rough rice yields and stable, high head rice. The validity of using Kang's yield-stability statistic for cultivar selection is also evident empirically by the adaptation and wide use of these four cultivars by southern U.S. rice producers. These results indicate that seeding date studies and stability analyses would be useful tools for rice breeders to identify cultivars that will be readily adapted and grown by rice producers.
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  • 62
    ISSN: 1573-5060
    Keywords: heterosis ; heterosis × environment interaction ; Oryza sativa ; rice ; standard heterosis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Moderate to high heterosis for yield and ten related characters was studied in 45 crosses involving six indica (I) and four tropical japonica (J) varieties of rice under three (E1-optimum sowing and high fertility, E2-both optimum sowing and fertility and E3- late sowing and high fertility) environments. Trends of magnitude of heterosis for grain yield and plant height were I/J 〉 I/I 〉 J/J and for days to 50% flowering I/J 〉 J/J 〉 I/I hybrids. Estimates of standard heterosis (%) for grain yield were –64.5 to 146.1 in E1, –70.4 to 82.2 in E2 and –67.2 to 63.8 in E3. Environment E1 seemed to be more favorable for higher heterosis expression than others. Higher heterosis in yield also accompanied heterosis in panicle number, dry matter and spikelet and grain number per panicle. Most estimates for days to flower were negative. Heterotic I/J hybrids also recorded maximum heterosis for earliness. Moderate to low standard heterosis for plant height across environments (2.0 to 13.7%) was recorded. Hybrids were identified in specific environments for direct exploitation in hybrid breeding. Hybrids B4116 / Sarjoo 52, B4122 / Pant Dhan 4 and B4122 / Narendera 359 were more stable than others over three environments.
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  • 63
    ISSN: 1572-9788
    Keywords: rice ; anther culturability ; doubled haploid population ; QTLs
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Anther culturability of rice is significantly different between indica and japonica varieties. A doubled haploid (DH) population was established via anther culture of an indica/japonica hybrid on SK3 medium, which had been shown particularly suitable for anther culture of indica/japonica hybrids. For analyzing the quantitative trait loci (QTLs) responsible for anther culturability, anthers of the DH lines were again cultured with SK3 medium and parameters for four traits representing the anther culturability were surveyed and analyzed with the molecular map constructed from the same DH population. The parameters for four major traits were as follows: callus induction frequency (CI), green plantlet differentiation frequency (GPD), albino plantlet differentiation frequency (APD), and green plantlet yield frequency (GPY). All four traits displayed continuous distributions among the DH lines. The correlation coefficients between these traits were also tested and showed that there was no relationship between callus induction and green plantlet differentiation frequencies, but both showed strong positive correlation with the frequency of green plantlet yield. For callus induction frequency, five QTLs were identified on chromosomes 6, 7, 8, 10 and 12. Two QTLs for green plantlet differentiation frequency were located on chromosomes 1 and 9. There was a major QTL for albino plantlet differentiation frequency on chromosome 9. No independent QTL was found for green plantlet yield frequency. The results may be useful in the selection of parents with high response to anther culture for rice haploid breeding and in the establishment of permanent DH populations for molecular mapping.
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  • 64
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    Biology and fertility of soils 25 (1997), S. 296-301 
    ISSN: 1432-0789
    Keywords: Key words Methane ; Forest soil ; pH ; Liming ; Nitrogen
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Methane uptake to soil was examined in individual chambers at three small forest catchments with different treatments, Control, Limed and Nitrex sites, where N-deposition was experimentally increased. The catchments consisted of both well-drained forest and wet sphagnum areas, and showed uptake of CH4 from the ambient air. The lowest CH4 uptakes were observed in the wet areas, where the different treatments did not influence the uptake rate. In the well-drained areas the CH4 uptakes were 1.6, 1.4 and 0.6 kg ha–1 year–1 for the Limed, Control and Nitrex sites, respectively. The uptake of methane at the well-drained Nitrex site was statistically smaller than at the other well-drained catchments. Both acidification and increase in nitrogen in the soil, caused by the air-borne deposition, are the probable cause for the reduction in the methane uptake potential. Uptake of methane was correlated to soil water content or temperature for individual chambers at the well-drained sites. The uptake rate of methane in soil cores was largest in the 0- to 10-cm upper soil layer. The concentration of CH4 in the soil was lower than the atmospheric concentration up to 30 cm depth, where methane production occurred. Besides acting as a sink for atmospheric methane, the oxidizing process in soil prevents the release of produced methane from deeper soil layers reaching the atmosphere.
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  • 65
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    Biology and fertility of soils 25 (1997), S. 366-371 
    ISSN: 1432-0789
    Keywords: Key words Water addition ; Nitrogen ; Glucose ; O2 content ; Temperature ; Closed-chamber method
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Emission of N2O from cultivated and fertilised soils may contribute significantly to the total global N2O emission. This study included laboratory and field investigations of the N2O production from a dry stubble field as influenced by addition of water, nitrogen and glucose. N2O fluxes were measured using a closed-chamber technique, and the O2 content in the soil was measured using soil probes. Results from a laboratory soil core technique were correlated to the relative N2O emission observed in the field. When the soil water content in the field increased from 14% to 60% water-filled pore space, the N2O emission increased from non-significant to a constant emission of 30 μg N m–2 h–1. At this soil water content the production of N2O was limited by the availability of nitrogen and carbon. Application of nitrogen at soil temperatures of 13 and 21°C in a pre-wetted soil increased the N2O emission 3.1- and 3.7-fold, respectively, whereas nitrogen plus carbon application increased the N2O emission 13.3- and 7.3-fold, respectively. In both treatments the N2O emission rates were affected by fluctuations in soil temperature and O2 content. The results indicate that even in a soil producing very little N2O under dry conditions, the soil microbial community maintains a potential to produce N2O when favourable conditions occur in terms of availability of water, nitrogen and carbon.
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  • 66
    ISSN: 0931-1890
    Keywords: Key words Pinus leucodermis ; Photosynthesis ; Respiration ; Nitrogen ; Chlorophyll
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract  Pinus heldreichii Christ is a long-lived, slow-growing Tertiary relict from the Balkans. In this study we evaluated the physiological characteristics of eight needle-age classes of P. heldreichii grown at the Arboretum of the Institute of Dendrology in Kórnik, Poland. At the end of the growing season, current-year foliage had the highest rates of mass-based light-saturated net photosynthesis (Asat) of 33.5 nmol CO2· g–1· s–1. Asat decreased with needle age, but older needle classes retained from approximately 62 to 26% of the current needles’ rate. The relationship between leaf N and chlorophyll a concentration among all needle-age classes was highly significant (r = 0.96, P = 0.0006). The variation in Asat of 1- to 7-year-old needles was linearly related to needle N concentration (r = 0.98, P = 0.0001). Needle dark respiration rates among these needle age classes ranged from 0.8 to 2.2 nmol · g–1· s–1 and decreased with needle age and nitrogen concentration. Total phenols and glucose concentrations increased linearly with needle age. A similar pattern was observed in acid buffering capacity and the pH of tissue homogenates. The water content ranged from 62% for the current needles to 51% for the 6-year-old needles. Greater investment in leaf structural tissue and increased chemical defense is associated with higher structural cost of older needles and may reduce their photosynthetic activity. Significant declines in water and nitrogen content with needle age and an increase in content of phenolics is most likely a defense adaptation of P. heldreichii related to the species’ long-lived leaves.
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  • 67
    ISSN: 1572-9788
    Keywords: diversity ; genetic mapping ; Oryza sativa ; RAPDs ; rice ; inter-simple sequence repeats
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Genetic variation between samples of Oryza sativa from 19 localities in Bangladesh and Bhutan was assessed using two PCR-based molecular marker systems: RAPD (random amplification of polymorphic DNA) and ISSR-PCR (inter-simple sequence repeat polymerase chain reaction). Employing RAPD, a set of 14 decanucleotides of arbitrary sequence directed the amplification of 94 reproducible marker bands, 47 (50%) of which were polymorphic. In addition, a set of 9 ISSR primers were used to direct amplification of 71 PCR products, 40 (56%) of which were polymorphic. Multivariate analyses of the two PCR-based molecular marker data sets provided evidence that the patterns of variation correspond with the classification described by Glaszmann [9] using isozyme analysis. Subtle differences in the relationships revealed between rice groups using the two types of PCR-based marker led to investigations of their map positions using an intraspecific doubled haploid mapping population. The observation that the chromosomal locations of markers can influence diversity assessments is presented and the significance of this is discussed.
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  • 68
    ISSN: 1572-9788
    Keywords: Bacillus thuringiensis ; Chilo suppressalis ; biolistic ; rice ; Scirpophaga incertulas ; transformation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Rice cultivars of isozyme group V include high-quality, aromatic rices that are difficult to improve by traditional methods because of the loss of quality characters upon sexual hybridization. Their low-tillering plant type predisposes them to economic loss from attack by stem borers, a group of insects to which they are susceptible. We report here the enhancement of stem borer resistance in cv. Tarom Molaii through transformation by microprojectile bombardment. Embryogenic calli derived from mature seeds were bombarded with gold particles coated with plasmid pCIB4421, carrying a synthetic truncated toxin gene based on the cryIA(b) gene from Bacillus thuringiensis, and plasmid pHygII, carrying the hygromycin phosphotransferase (hpt) selectable marker gene. Inclusion of 50 mg/l hygromycin B in culture media from bombardment through to rooting of plantlets eliminated escapes. The procedure generated three independent hpt transformants of which two also contained the cryIA(b) gene. One such line (No. 827) produced truncated (67 kDa) CryIA(b) protein equivalent to about 0.1% of total soluble protein. The cryIA(b) gene was controlled by the promoter of the maize C4 PEP carboxylase gene and was expressed in leaf blades but was not expressed to a detectable level in dehulled mature grain. Line 827 contained about 3 copies of the cryIA(b) gene which segregated as a single dominant Mendelian locus in the second (T1) and third (T2) generations and co-segregated with enhanced resistance to first-instar larvae of striped stem borer (Chilo suppressalis) and yellow stem borer (Scirpophaga incertulas). T2 line 827-6 homozygous for the cryIA(b) gene showed no dead hearts or whiteheads after infestation with stem borers, whereas T2 line 827-25 lacking the gene averaged 7 dead hearts per plant and 2.25 whiteheads per plant. These results establish that transformation of high-quality rices of group V is a feasible alternative to sexual hybridization.
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  • 69
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    Plant and soil 189 (1997), S. 145-153 
    ISSN: 1573-5036
    Keywords: coleoptile ; cultivar ; direct sowing ; flooded soil ; rice ; seedling establishment
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Seedling establishment of direct sown rice plants is less successful in flooded soil than in drained soil. This study was conducted to clarify the difference in morphogenesis of rice seeds sown in flooded and drained soils and to identify the morphological characteristics responsible for successful establishment of cultivars in flooded soil. Rice cultivars ASD1 and IR41996–50–2–1–3, superior in seedling establishment in flooded soil, and Mahsuri and IR72, non-superior (control), were sown at a depth of 25 mm in soil flooded with 25 mm of water or in drained soil. The coleoptile and 1st leaf emerged from the soil surface simultaneously in drained soil while in flooded soil the coleoptile emerged first. The coleoptile of superior cultivars, unlike the controls, elongated more in flooded soil than in drained soil. In flooded soil, the development of mesocotyl, 1st leaf, and roots were inhibited to a greater extent in the controls, than in the superior cultivars. In sealed flasks in which gas containing 0–21% O2 was exchanged daily, the superior cultivars developed longer coleoptiles than the controls at lower O2 concentrations. These findings suggest that the reason superior cultivars grow better in flooded soil than the controls is that the coleoptile elongates faster and longer in hypoxia and is able to reach the soil surface where O2 is available.
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  • 70
    ISSN: 1573-5036
    Keywords: colonization ; indole-3-acetic acid ; invasion ; Nod factors ; nod gene induction ; rhizobia ; rhizobial attachment ; rice ; thick short lateral roots ; trans-zeatin
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Legume-rhizobial interactions culminate in the formation of structures known as nodules. In this specialized niche, rhizobia are insulated from microbial competition and fix nitrogen which becomes directly available to the legume plant. It has been a long-standing goal in the field of biological nitrogen fixation to extend the nitrogen-fixing symbiosis to non-nodulated cereal plants, such as rice. To achieve this goal, extensive knowledge of the legume-rhizobia symbioses should help in formulating strategies for developing potential rice-rhizobia symbioses or endophytic interactions. As a first step to assess opportunities for developing a rice-rhizobia symbiosis, we evaluated certain aspects of rice-rhizobia associations to determine the extent of predisposition of rice roots for forming an intimate association with rhizobia. Our studies indicate that: a. Rice root exudates do not activate the expression of nodulation genes such as nodY of Bradyrhizobium japonicum USDA110, nodA of R. leguminosarum bv. trifolii, or nodSU of Rhizobium. sp. NGR234; b. Neither viable wild-type rhizobia, nor purified chitolipooligosaccharide (CLOS) Nod factors elicit root hair deformation or true nodule formation in rice; c. Rhizobia-produced indole-3-acetic acid, but neither trans-zeatin nor CLOS Nod factors, seem to promote the formation of thick, short lateral roots in rice; d. Rhizobia develop neither the symbiont-specific pattern of root hair attachment nor extensive cellulose microfibril production on the rice root epidermis; e. A primary mode of rhizobial invasion of rice roots is through cracks in the epidermis and fissures created during emergence of lateral roots; f. This infection process is nod-gene independent, nonspecific, and does not involve the formation of infection threads; g. Endophytic colonization observed so far is restricted to intercellular spaces or within host cells undergoing lysis. h. The cortical sclerenchymatous layer containing tightly packed, thick walled fibers appears to be a significant barrier that restricts rhizobial invasion into deeper layers of the root cortex. Therefore, we conclude that the molecular and cell biology of the Rhizobium-rice association differs in many respects from the biology underlying the development of root nodules in the Rhizobium-legume symbiosis.
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  • 71
    ISSN: 1573-5036
    Keywords: nitrogen ; 13N ; 15N ; phloem sap ; positron-emitting tracer imaging system ; rice ; xylem
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Nitrogen movement through the xylem vessels and sieve tubes in rice plants was studied using xylem and phloem sap analysis in combination with stable and radioactive nitrogen isotope techniques. More than 90% of nitrogen was translocated in the sieve tubes of rice plants as amino acids. When 15N (99.6 atom%) was applied as a nitrate to the root, 15N first appeared in phloem sap of the leaf sheath within 10 minutes and increased to 37 atom% excess 5 hours after the experiment had started. In long-term experiments, 63% of nitrogen in the phloem sap of the leaf sheath and 15% in that of the uppermost internode came from nitrogen absorbed within the last 24 hours and 50 hours, respectively. To obtain information about the more rapid circulation of nitrogen in the plant, radioactive 13N was used as a tracer. A positron-emitting tracer imaging system was used to show that 13N was transferred to the leaf sheath within 8 minutes of its application to the roots. Analysis of the xylem sap of the leaf sheath showed that when the nitrate was applied to the roots, most of the nitrogen in the xylem was transported as a nitrate. These data showed that phloem and xylem sap analysis together with the stable and radioactive nitrogen techniques provide a good method for the detection of nitrogen cycles in plants.
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  • 72
    ISSN: 1573-5036
    Keywords: endophytic microbes ; endo-symbiosis ; genomic fingerprinting ; infection ; marker genes ; nitrogen fixation ; PCR ; rep-PCR ; rice
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The extension of nitrogen-fixing symbioses to important crop plants such as the cereals has been a long-standing goal in the field of biological nitrogen fixation. One of the approaches that has been used to try to achieve this goal involves the isolation and characterization of stable endophytic bacteria from a variety of wild and cultivated rice species that either have a natural ability to fix nitrogen or can be engineered to do so. Here we present the results of our first screening effort for rice endophytes and their characterization using acetylene reduction assays (ARA), genomic fingerprinting with primers corresponding to naturally occurring repetitive DNA elements (rep-PCR), partial 16S rDNA sequence analysis and PCR mediated detection of nitrogen fixation (nif) genes with universal nif primers developed in our laboratory. We also describe our efforts to inoculate rice plants with the isolates obtained from the screening, in order to examine their invasiveness and persistence (stable endophytic maintenance). Lastly, we review our attempts to tag selected isolates with reporter genes/proteins, such as beta-glucuronidase (gus) or green fluorescent protein (gfp), in order to be able to track putative endophytes during colonization of rice tissues.
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  • 73
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    Plant and soil 196 (1997), S. 201-210 
    ISSN: 1573-5036
    Keywords: leaf photosynthesis ; nitrogen nutrition ; ribulose-1 ; 5-bisphosphate carboxylase/oxygenase ; rice ; Rubisco ; yield potential
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Characteristics of rice (Oryza sativa) as a crop plant are briefly introduced, and the relationship between formation of yield potential and nitrogen (N) nutrition is described on the basis of studies using 15N as a tracer. In addition, the relationship between the leaf photosynthetic capacity and leaf N, and the factors limiting leaf photosynthesis under different growth conditions are reviewed. Finally, targets for improving rice yield potential are discussed with a focus on the role of increased photosynthesis efficiency in relation to leaf N status and the photosynthetic components in the leaves.
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  • 74
    ISSN: 1573-5060
    Keywords: Oryza sativa ; rice ; aluminium-resistance ; selection ; stress ; in vitro ; hydroponic cultures
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract A selection procedure is described that isolated Al-resistant individuals from a sensitive rice (Oryza sativa L.) genotype. Somaclonal variation was used as the only source of variability and selection pressures were applied at both callus and regenerated plant levels. When 10 week-old, embryo-derived calli were submitted to different Al stresses for a period of 20 weeks. After this in vitro stress period, selected calli were grown during 18 weeks, without selection pressure, on regeneration media. Selection pressures were applied on regenerated plants (R0), and 9 R0 plants which produced seeds were selected. The transmission of the Al-resistant character to the R1, R2, R3 and R4 generations was then investigated, and three plant lines which had an increased percentage of Al-resistant plants till the fourth generation of self-pollination, were identified. One was from a callus maintained on an Al-free medium. The efficiency of in vitro selection pressures was therefore debated.
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  • 75
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    Genetic resources and crop evolution 44 (1997), S. 159-164 
    ISSN: 1573-5109
    Keywords: genotypic differences ; germinability ; isozyme groups ; longevity ; rice ; seed development
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The storage potential of seeds harvested at different stages of maturity was studied in ten cultivars of Oryza sativa, representing six known isozyme groups, and in two cultivars of O. glaberrima. Mass maturity (the end of the seed-filling period) was attained between 14.2 and 20.2 days after anthesis (DAA). A comparison of the estimates of p 50 (time in storage for viability to decline to 50%) of seeds harvested at 21, 28 and 35 DAA and stored at 35°C with 15% moisture content showed that maximum longevity was attained between 28 and 35 DAA in most cultivars. Cultivars belonging to isozyme group II survived longer than other cultivars with estimates of p 50 nearly doubled. On the other hand, the floating rices of Group IV had shorter longevity. Within group VI, the upland cultivar survived longer than the lowland cultivar. Both O. glaberrima cultivars survived reasonably well, showing that African rice cultivars also differ in longevity.
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  • 76
    ISSN: 1573-5036
    Keywords: Azorhizobium caulinodans ; crack entry ; intercellular colonization ; naringenin ; rice ; wheat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Recently, evidence has been obtained that naturally occurring rhizobia, isolated from the nodules of non-legume Parasponia species and from some tropical legumes, are able to enter the roots of rice, wheat and maize at emerging lateral roots by crack entry. We have now investigated whether Azorhizobium caulinodans strain ORS571, which induces root and stem nodules on the tropical legume Sesbania rostrata as a result of crack entry invasion of emerging lateral roots, might also enter rice and wheat by a similar route. Following inoculation with ORS571 carrying a lacZ reporter gene, azorhizobia were observed microscopically within the cracks associated with emerging lateral roots of rice and wheat. A high proportion of inoculated rice and wheat plants had colonized lateral root cracks. The flavanone naringenin at 10 and 10 M stimulated significantly the colonization of lateral root cracks and also intercellular colonization of wheat roots. Naringenin does not appear to be acting as a carbon source and may act as a signal molecule for intercellular colonization of rice and wheat by ORS571 by a mechanism which is nod gene-independent, unlike nodule formation in Sesbania rostrata. The opportunity now arises to compare and to contrast the ability of Azorhizobium caulinodans with that of other rhizobia, such as Parasponia rhizobia, to intercellularly colonize the roots of non-legume crops.
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  • 77
    ISSN: 1573-5036
    Keywords: Acetobacter ; auxin ; 2 ; 4-D ; clover ; nitrogen fixation ; Rhizobium ; rice ; transgenic plants
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Root morphology is both genetically programmed and environmentally determined. We have begun an analysis into the components of root development by: (a) constructing a range of transgenic clover plants to assess some of the genetic programs involved as both roots and nodules are initiated and develop. These transgenic plants report on auxin activity, flavonoid synthesis and chitinase expression and suggest a role for flavonoids as regulators of auxin levels; and (b) determining in cereals the effect of both added auxin and specific microorganisms on the initiation and development of modified root outgrowths and lateral roots. Appropriate combinations of auxin, the nitrogen fixing Acetobacter diazotrophicus, and rice variety did give rise to some plants which grew slowly for over 12 months in a nitrogen-free medium.
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  • 78
    ISSN: 1573-5036
    Keywords: association ; clover ; endophyte ; PGPR ; Rhizobium leguminosarum bv. trifolii ; rice ; root ; symbiosis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract For over 7 centuries, production of rice (Oryza sativa L.) in Egypt has benefited from rotation with Egyptian berseem clover (Trifolium alexandrinum). The nitrogen supplied by this rotation replaces 25- 33% of the recommended rate of fertilizer-N application for rice production. This benefit to the rice cannot be explained solely by an increased availability of fixed N through mineralization of N- rich clover crop residues. Since rice normally supports a diverse microbial community of internal root colonists, we have examined the possibility that the clover symbiont, Rhizobium leguminosarum bv. trifolii colonizes rice roots endophytically in fields where these crops are rotated, and if so, whether this novel plant-microbe association benefits rice growth. MPN plant infection studies were performed on macerates of surface-sterilized rice roots inoculated on T. alexandrinum as the legume trap host. The results indicated that the root interior of rice grown in fields rotated with clover in the Nile Delta contained ∼106 clover-nodulating rhizobial endophytes g fresh weight of root. Plant tests plus microscopical, cultural, biochemical, and molecular structure studies indicated that the numerically dominant isolates of clover-nodulating rice endophytes represent 3 – 4 authentic strains of R. leguminosarum bv. trifolii that were Nod Fix on berseem clover. Pure cultures of selected strains were able to colonize the interior of rice roots grown under gnotobiotic conditions. These rice endophytes were reisolated from surface-sterilized roots and shown by molecular methods to be the same as the original inoculant strains, thus verifying Koch's postulates. Two endophytic strains of R. leguminosarum bv. trifolii significantly increased shoot and root growth of rice in growth chamber experiments, and grain yield plus agronomic fertilizer N-use efficiency of Giza-175 hybrid rice in a field inoculation experiment conducted in the Nile Delta. Thus, fields where rice has been grown in rotation with clover since antiquity contain Fix strains of R. leguminosarum bv. trifolii that naturally colonize the rice root interior, and these true rhizobial endophytes have the potential to promote rice growth and productivity under laboratory and field conditions.
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  • 79
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    Plant and soil 194 (1997), S. 161-169 
    ISSN: 1573-5036
    Keywords: chitin ; elicitor ; receptor ; rhizobium ; rice ; legume
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract This review focuses on a comparison of plant reception of chitin oligosaccharides by legumes and rice. Chitin oligosaccharides (dp=6-8) released from fungal pathogens induce plant defense reactions in rice, while lipo-chitin oligosaccharides (dp=4-5) induce the development of a new plant organ, the nodule, in legumes during infection by rhizobia. The former situation is pathogenic and the latter situation beneficial to the plant. However, these two systems do share some common features. We hypothesize that rice and legumes, as well as other plants, may possess members of an evolutionarily conserved family of chitin binding proteins. These proteins may play an important role in chitin reception and subsequent signal transduction. However, data support the idea that legumes may possess a second chitin binding receptor that shows a greater specificity for the lipo-chitin nodulation signals. The presence of this second receptor may be one of the key factors that distinguishes plants capable of nodulation by rhizobia (e.g., soybean) from those that cannot be nodulated (e.g., rice).
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  • 80
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    Plant and soil 194 (1997), S. 1-10 
    ISSN: 1573-5036
    Keywords: endophyte ; legume-Rhizobium ; nif gene ; nitrogen fixation ; rice
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Recent advances in understanding symbiotic Rhizobium-legume interactions at the molecular level, the discovery of endophytic interactions of nitrogen-fixing organisms with non-legumes, and the ability to introduce genes into rice by transformation have stimulated researchers world wide to harness opportunities for nitrogen fixation and improved N nutrition in rice. In a think-tank workshop organized by IRRI in 1992, the participants reaffirmed that such opportunities do exist for cereals and recommended that rice be used as a model system. Subsequently, IRRI developed a New Frontier Project to coordinate the worldwide collaborative efforts among research centers committed to reducing dependency of rice on mineral N resources. An international Biological Nitrogen Fixation (BNF) working group was established to review, share research results/materials and to catalyze research. The strategies of enabling rice to fix its own N are complex and of a long-term nature. However, if achieved, they could enhance rice productivity, resource conservation, and environmental security. The rate of obtaining success would, of course, benefit tremendously from concerted efforts from a critical mass of committed scientists around the world, as well as a constant and continued funding support from the ‘donor’ community.
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  • 81
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    Euphytica 95 (1997), S. 253-258 
    ISSN: 1573-5060
    Keywords: rice ; Oryza sativa ; widely compatible restorer ; fertility restoration ability ; anther culture ; inheritance ; Indica-japonica heterosis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Following anther culture of various F1 hybrids of indica restorer (R) lines/wide compatible varieties (WCVs) and japonica R lines/WCVs, the homozygous diploid plants (2n) generated were test-crossed with indica WA type cytoplasmic-genetic male sterile (CMS) line Zhanshan 97A (WA), indica testers Nanjing 11 and Nante, japonica BT CMS line Hanfeng A (BT), and japonica testers Balilla and Akihikari to identify widely compatible restorer lines. The results of this study showed that among the diploid pollen plants generated from F1 hybrids of indica R lines/WCVs, 36.7% and 64.7% possessed normal fertility restoration ability (rate of seed-setting 〉 80%) to Hanfeng A and Zhanshan 97A, respectively. 71.3% and 32.3% had normal fertility restoration ability to Hanfeng A and Zhanshan 97A, respectively, in diploid pollen plants derived from the japonica R lines/WCVs F1's anther culture. Several widely compatible R lines were selected from anther culture of F1 hybrids of indica R lines/WCVs and japonica R lines/WCVs. These widely compatible R lines derived from diploid pollen plants showed good wide compatibility and restoration ability both to WA and BT type CMS lines. Strong standard heterosis of major agronomic traits and yield traits was observed in F1 test-crosses of widely compatible R lines with Hanfeng A and Zhanshan 97A. The wide compatibility in widely compatible R lines H17, H158 and H281 was studied by a set of three-way crosses. Segregation of the fertile plants with seed-setting rate 〉 70% and semi-fertile plants with seed-setting rate 〉 69.9% agreed with a ratio of 1:1, indicating that wide compatibility in these widely compatible R lines is governed by a pair of major genes.
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  • 82
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    Euphytica 95 (1997), S. 301-307 
    ISSN: 1573-5060
    Keywords: gene location ; heading time ; Oryza sativa ; photoperiod sensitivity ; rice ; trisomic analysis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Recent genetic analyses on heading-time of rice indicated that almost all the well-adapted varieties in the temperate zone carry a strong photoperiod-sensitivity gene E1, a dominant allele of E1 locus. In order to identify the chromosome on which E1 is located, a trisomic analysis was made using two primary trisomic series originating from the japonica varieties, Nipponbare and Kinmaze, respectively. The Nipponbare and Kinmaze series were crossed with heading-time tester lines, EG0 and EG3, respectively, both of which did not carry the E1. The F2 populations for chromosome 1, 2, and 3 could not be analyzed due to lack of seed. All the other F2 populations showed distinct segregation into early-type and late-type plants caused by the E1 locus segregation, which suggested that the trisomic analysis for E1 locus could be efficiently made. Both disomic and trisomic groups in the F2 population from the cross of the trisomic line for chromosome 7 × EG0 showed a segregation ratio significantly different at the 1% level from a ratio of 1 [e1e1; early]: 3 [E1e1, E1E1; late]. This suggested that E1 was located on chromosome 7. Subsequently, the linkage analysis was made using three morphological marker genes on chromosome 7. It was recognized that E1 was linked to rfs (rolled fine strip gene) and slg (slender glume gene) with recombination values of 16.3 ± 5.88 and 9.1 ± 4.72%, respectively. From these results, it can be concluded that E1 is most likely to be located on chromosome 7.
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  • 83
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    Euphytica 96 (1997), S. 135-142 
    ISSN: 1573-5060
    Keywords: Oryza sativa ; chilling tolerance ; in vitro selection ; rice ; somaclonal variation ; field performance
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Embryo-derived calli of four rice varieties cultivated at high altitude in Burundi — Facagro 57, Facagro 76, Kirundo 3 and Kirundo 9 — were submitted to different temperature regimes. The percentage of regenerating calli greatly varied depending on variety, length of culture and callus temperature treatment. The reduction of regeneration percentages induced by low temperature was more pronounced in the more sensitive varieties. Regenerated plants (R0) and their progenies in R1, R2 and R3 were cold-screened together with control plants. In all varieties, significantly higher survival rates were obtained in R3 with in vitro plants than with control plants. Such chilling tolerance improvement was not obtained following a massal selection applied during 3 successive generations onto the control plants. In vitro plants regenerated from calli cultivated either at 25 °C, either at 4 °C, were cultivated at different altitudes in Burundi during two successive generations. For most observed traits, the in vitro plants were characterized by lower means, larger variation and higher maximum values than the control plants. The most chilling-tolerant somaclonal families were most usually characterized by extensive differences in fatty acid composition, chilling-induced electrolyte leakage and chlorophyll fluorescence, compared to the varieties they derived from.
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  • 84
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    Euphytica 97 (1997), S. 25-29 
    ISSN: 1573-5060
    Keywords: Oryza sativa ; amylograph viscosity characteristics ; inheritance ; rice
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Southern United States long grain rice (Oryza sativa L.) is a unique market type characterized by intermediate amylose content, gelatinization temperature, and amylograph viscosity profile characteristics. Rice breeders sometimes use long grain germplasm with differing amylograph viscosity profiles. The inheritance of rice amylograph viscosity profiles has not been ascertained and, thus, was the objective of this study. A six parent diallel (parents plus F1 hybrids) was evaluated at Stuttgart, AR during 1994 and 1995. In 1994, 65 F2 plants from the ‘L-202’ × ‘Newrex’ and L-202 × ‘Katy’ crosses were space planted, and in 1995, the 65 F2:3 lines were planted as hill plots. The inheritance of amylograph viscosity profiles appeared to be controlled by a single locus with genes with additive effects. The results of the diallel analysis also support control by a single locus with genes with additive effects because GCA effects were significant and SCA effects nonsignificant for peak, hot paste, and cool paste viscosities. Intermediate amylose content and intermediate amylograph viscosity profiles were strongly correlated. Selection first for intermediate amylose content followed by reselection for intermediate hot paste viscosities would identify long grain genotypes with southern United States long grain cooking quality in progeny from crosses between southern United States long grain rice genotypes and softer cooking long grain genotypes.
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  • 85
    ISSN: 1573-5060
    Keywords: isozyme ; differentiation ; Oryza sativa ; rice ; upland rice
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Two rice ecotypes, the so-called lowland and upland populations, which carry different isozyme genotypes mostly at a single locus, are cultivated in Japan. The aim of this study was to examine the origin and the mechanism for keeping these genetic differences. The upland population is cultivated in upland fields and carries a different allele for a particular isozyme gene, Pgd-1, which has never been found in the lowland population. RFLP markers showed a weak trend for genetic differentiation between the two ecotypes. On the other hand, morphological, and physiological traits showed marked differences between the two ecotypes. Furthermore, based on the genotypic difference, two Japonica subgroups are defined in the upland population. Subgroup I is the minor group and carries key lowland characters, including the genotype for PGD. Subgroup II carries different traits and the genotype for PGD of the alternative subgroup. As an allelic difference for Pgd-1 is known to occur between the two ecospecies, Tropical (Tr) and Temperate (Tm) Japonicas, upland cultivars can be classified by diagnostic characters which distinguish a variety into Tr or Tm type. The upland population consists of three types of cultivars, Tr-, Tm- and intermediate-type. In contrast, the lowland population consists of a uniform Tm type Japonicas. As Japanese upland cultivars still have an isozyme allele specific to the Tr type, the upland population has a rather complex constitution which is presumably now being introgressed by lowland genetic material, but still represents a major difference at some genetic levels. Upland rice carries several stress-resistant genes which would be useful for lowland rice breeding. The genetic difference would be efficient for tagging upland specific traits by upland specific genetic markers.
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  • 86
    ISSN: 1573-5060
    Keywords: Oryza sativa ; Aus ; rice ; hybrid sterility ; isozomes ; varietal diversity
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Magnitudes of genetic variation within each of major varietal groups of cultivated rice were surveyed in terms of isozyme polymorphism and allelic differentiation of hybrid sterility loci, both of which are considered to have litt le selective value. Allelic differences for 20 isozyme loci were examined in a total of 337 accessions, including Indica and Japonica rices. Aus cultivars from India, Javanica cultivars and both landraces and cultivars from China. Eleven out of the 20 isozyme loci were polymorphic. The Aus cultivars contained more alleles per locus than others. The hybrid sterilities in the crosses among Chinese cultivars, Indica and Japonica cultivars were mainly controlled by locus S-5, whereas the hybrid sterilities of Aus cultivars, when they were crossed to Indica, Japonica or Javanica cultivars, were found to be controlled by allelic interaction at hybrid sterility loci S-5, S-7, S-9 and S-15. Also in terms of the number of alleles at S-5 and S-7, Aus cultivars contained more alleles than others. While the Aus group showed an extreme diversity for both hybrid sterility alleles and isozymes, modern cultivars from the south of YangZi River in China were classified into Indica type and those from the north were into Japonica, which were almost the same as those in Japan. On the basis of the measured polymorphism the Indica-Japonica differentiation was explained by founder effects, i.e., through selection and distribution of two original sources each with a unique set of markers. Contrastingly, the continuous and pronounced diversity in the Aus group was attributed to the absence of such a process. The intermediate groups in Yunnan province and Tai-hu Lake region of China are considered to be isolated from such founder effects, retaining an intermediate diversity in terms of isozymes and hybrid sterility genes. Since hybrid sterility hampers the exchange of genes between cultivars of different groups, the understanding of its genetic basis will be important in rice breeding, particularly in hybrid rice breeding.
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  • 87
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    European journal of plant pathology 103 (1997), S. 363-371 
    ISSN: 1573-8469
    Keywords: blast ; rice ; Magnaporthe grisea ; Pyricularia ; virulence ; genetic variability
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The genetic variability among 41 isolates of the blast pathogen (Magnaporthe grisea) from five European rice growing countries was studied. The genealogy of the isolates was investigated by DNA fingerprinting and the results compared to the degree of similarity for (a)virulence factors. Fingerprinting grouped the isolates into five discrete lineages, that typically showed less than 65% band similarity. Within each lineage, two or more haplotypes were detected with a band similarity of 80% or higher. Each lineage showed a characteristic virulence pattern. All isolates of lineage ‘E5’ belonged to the same pathotype. The other lineages were composed of clusters of closely related pathotypes that showed variation for virulence to cultivars with certain known resistance genes, while remaining invariably (a)virulent to others. In most cases, lineage classification of an isolate could be easily inferred by its pathotype. Certain resistance genes and certain lineage-excluding resistance gene combinations appear to provide protection against all of the virulence factors sampled.
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  • 88
    ISSN: 1432-0789
    Keywords: Carbon ; Coffee pulp ; Eisenia fetida ; Nitrogen ; Nutrients ; Vermicomposting
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract In Colombia, more than 1 million tons of coffee pulp are produced every year. Its transformation into compost by means of turned piles has led to a final product with poor physical and chemical characteristics and vermicomposting has been suggested as an alternative method of transforming these wastes into a useful organic fertilizer. The ability of the earthworm Eisenia fetida to transform coffee pulp into a valuable compost was evaluated. The influence of bed depth and time on different C fractions, N content and availability of nutrients was studied. The results showed that the C and N contents were not affected by the depth of the bed, whereas time affected both. An increase in the fractionation ratio, determined by calculating the C in the fraction smaller than 100 μm as a percentage of C in the samples as a whole, and low values of humic-like substances were recorded during vermicomposting. After ingestion of the pulp by the earthworms, an increase in available P, Ca, and Mg but a decrease in K were detected.
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    Biology and fertility of soils 22 (1996), S. 184-190 
    ISSN: 1432-0789
    Keywords: Cropping systems ; Soil organic matter ; Nitrogen ; Phosphorus ; Potassium
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The effects of up to 23 years of agricultural cropping of a boreal forest soil on soil organic carbon (SOC) and N, P, and K pools were studied. The cropping systems studied were: (a) continuous barley, (b) continuous forage bromegrass, (c) continuous forage legume, and (d) barley/grass-legume forage rotation. Continuous bromegrass increased while other cropping systems decreased SOC in the surface soil. Kjeldahl N in soil approximately followed the trend in SOC. The net gain in N under continuous grass was attributed mostly to nonsymbiotic N fixation. Changes in SOC content appeared to be also influenced by cropping and tillage frequencies. Changes in fixed (intercalary) ammonium were small. There was no measurable change in total P, in part, because input was only slightly higher than crop offtake. Organic P increased under continuous bromegrass, and tended to decrease under continuous legume. The C/N and C/P ratios of soil organic matter decreased slightly with cropping. Exchangeable K (Kex) was decreased by cropping systems containing a legume crop to a greater extent than those without a legume crop. Most of the decrease occurred in the 0–15 cm depth. Nitric acid extractable K was not affected by cropping. Since net loss of Kex to 30 cm depth was substantially less than crop offtake, it is suggested that subsoil K reserves and matrix K were supplying a major portion of the crops' K requirement. It is concluded that the effects of cropping systems on SOC, N, P and K are influenced by crop type, and cropping and tillage frequencies.
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  • 90
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    Biology and fertility of soils 22 (1996), S. 1-9 
    ISSN: 1432-0789
    Keywords: Key words Microbial Biomass ; Carbon ; Nitrogen ; Chloroform-fumigation extraction ; Temperature
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Laboratory studies were conducted to determine C and N dynamics during the decomposition of ryegrass straw under mesophilic and thermophilic conditions. A KC of 0.61 was developed for the chloroform-fumigation extraction method to estimate microbial biomass C. These estimates showed that the C and N requirement of the thermophilic biomass was approximately 50% of the mesophilic biomass. There was no relationship between chloroform-fumigation microbial biomass estimates and plating of microorganisms from straw on specific media. Mineralized C was measured as 185 and 210 g kg–1 straw in the 25°C and 50°C treatments, respectively. The efficiency of microbial substrate use, on a total straw basis, was 34 and 28% in the 25°C and 50°C incubations, respectively. The level of soluble C declined more slowly than total C mineralization at both temperatures, indicating that a portion of the labile C was not readily biodegradable. The addition of N decreased the rate of C mineralization at both temperatures. The reduced N requirement of the thermophiles explains why rapid degradation of the high C:N residue occurred without additional N or the need for the addition of a low C:N ratio substrate. Additional inoculum did not affect the decomposition process. We conclude that the promotion of thermophilic biomass activities, through composting for example, may prove useful in upgrading agricultural wastes for introduction into sustainable cropping systems.
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  • 91
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    Biology and fertility of soils 23 (1996), S. 399-404 
    ISSN: 1432-0789
    Keywords: Key words Snails ; Nitrogen ; Desert ; Mineralization ; Nitrification ; Respiration ; Feces ; N cycling processes
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Snail grazing and feces production have been shown to be major components of the nitrogen (N) budget of Negev Desert ecosystems. However, the movement of N from feces into soil N cycling processes has not been studied. In this study, we measured immediate N release from different types of snail feces following wetting of dry desert soils, and characterized potential net N mineralization and nitrification and soil respiration over a 12-day incubation under laboratory conditions. The dynamics of inorganic N exhibited two distinct phases during the 12-day incubation: (1) immediate release of inorganic N following wetting of the soil and (2) decline of inorganic N from day 1 to day 12 of the incubation. The immediate pulse of N release from this one wetting event (6–25 mg N m–2) was larger than annual atmospheric inputs of N to Negev Desert ecosystems (〈2 mg N m–2); however, from 50 to 80% of the N released upon wetting was consumed by the end of the incubation. There were differences in inorganic N release and respiration from feces from different kinds of snails, and from feces from the same species of snail fed different plants. The results suggest that while snail feces contribute significant amounts of plant available N to Negev ecosystems, plants must compete with other “sinks” for this N.
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  • 92
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    Biology and fertility of soils 23 (1996), S. 399-404 
    ISSN: 1432-0789
    Keywords: Snails ; Nitrogen ; Desert ; Mineralization ; Nitrification ; Respiration ; Feces ; N cycling processes
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Snail grazing and feces production have been shown to be major components of the nitrogen (N) budget of Negev Desert ecosystems. However, the movement of N from feces into soil N cycling processes has not been studied. In this study, we measured immediate N release from different types of snail feces following wetting of dry desert soils, and characterized potential net N mineralization and nitrification and soil respiration over a 12-day incubation under laboratory conditions. The dynamics of morganic N exhibited two distinct phases during the 12-day incubation: (1) immediate release of inorganic N following wetting of the soil and (2) decline of inorganic N from day 1 today 12 of the incubation. The immediate pulse of N release from this one wetting event (6–25 mg N m-2) was larger than annual atmospheric inputs of N to Negev Desert ecosystems (〈2 mg N m-2); however, from 50 to 80% of the N released upon wetting was consumed by the end of the incubation. There were differences in inorganic N release and respiration from feces from different kinds of snails, and from feces from the same species of snail fed different plants. The results suggest that while snail feces contribute significant amounts of plant available N to Negev ecosystems, plants must compete with other “sinks” for this N.
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  • 93
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    Biology and fertility of soils 22 (1996), S. 40-44 
    ISSN: 1432-0789
    Keywords: Key words Northern hardwoods ; Disturbance in soil ; Nitrogen ; Soil warming
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Installation of heating cables for warming soil was used to evaluate the effect of disturbance on soil solution chemistry within a northern hardwood forest (Adirondack Mountains, New York). Differences in response among treatments suggested the importance of both the depth and timing of cable installation. There were increases (p〉0.05) in many solutes within pilot study plots in which “surrogate cable” was installed at 15 cm depth. Most notably, mean nitrate concentrations for the 1st year following disturbance were 744 μeq l–1 at 15 cm depth compared to 7 μeq l–1 for the non-disturbed control. A comparison of pilot plots with 5 cm cable depth and an unheated soil-warming control plot with the same cable disturbance showed that the seasonality of soil disturbance may have a key role in response to disturbance. The soil solution response was diminished if installation occurred during the spring, a period of rapid uptake of nitrogen by vegetation. Mean nitrate concentrations were 176 μeq l–1 for 5-cm pilot plots (installed in fall 1991) versus 6 μeq l–1 for 5-cm, unheated soil-warming control plots (installed in spring 1992). Disturbance effects were attenuated over time and not generally apparent 1 year after installation.
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  • 94
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    Biology and fertility of soils 22 (1996), S. 1-9 
    ISSN: 1432-0789
    Keywords: Microbial Biomass ; Carbon ; Nitrogen ; Chloroform-fumigation extraction ; Temperature
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Laboratory studies were conducted to determine C and N dynamics during the decomposition of ryegrass straw under mesophilic and thermophilic conditions. A KC of 0.61 was developed for the chloroform-fumigation extraction method to estimate microbial biomass C. These estimates showed that the C and N requirement of the thermophilic biomass was approximately 50% of the mesophilic biomass. There was no relationship between chloroform-fumigation microbial biomass estimates and plating of microorganisms from straw on specific media. Mineralized C was measured as 185 and 210 g kg-1 straw in the 25°C and 50°C treatments, respectively. The efficiency of microbial substrate use, on a total straw basis, was 34 and 28% in the 25°C and 50°C incubations, respectively. The level of soluble C declined more slowly than total C mineralization at both temperatures, indicating that a portion of the labile C was not readily biodegradable. The addition of N decreased the rate of C mineralization at both temperatures. The reduced N requirement of the thermophiles explains why rapid degradation of the high C:N residue occurred without additional N or the need for the addition of a low C:N ratio substrate. Additional inoculum did not affect the decomposition process. We conclude that the promotion of thermophilic biomass activities, through composting for example, may prove useful in upgrading agricultural wastes for introduction into sustainable cropping systems.
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  • 95
    ISSN: 1432-0789
    Keywords: Key words Carbon ; Coffee pulp ; Eisenia fetida ; Nitrogen ; Nutrients ; Vermicomposting
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract In Colombia, more than 1 million tons of coffee pulp are produced every year. Its transformation into compost by means of turned piles has led to a final product with poor physical and chemical characteristics and vermicomposting has been suggested as an alternative method of transforming these wastes into a useful organic fertilizer. The ability of the earthworm Eisenia fetida to transform coffee pulp into a valuable compost was evaluated. The influence of bed depth and time on different C fractions, N content and availability of nutrients was studied. The results showed that the C and N contents were not affected by the depth of the bed, whereas time affected both. An increase in the fractionation ratio, determined by calculating the C in the fraction smaller than 100 μm as a percentage of C in the samples as a whole, and low values of humic-like substances were recorded during vermicomposting. After ingestion of the pulp by the earthworms, an increase in available P, Ca, and Mg but a decrease in K were detected.
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  • 96
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    Biology and fertility of soils 22 (1996), S. 40-44 
    ISSN: 1432-0789
    Keywords: Northern hardwoods ; Disturbance in soil ; Nitrogen ; Soil warming
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Installation of heating cables for warming soil was used to evaluate the effect of disturbance on soil solution chemistry within a northern hardwood forest (Adirondack Mountains, New York). Differences in response among treatments suggested the importance of both the depth and timing of cable installation. There were increases (p〉0.05) in many solutes within pilot study plots in which “surrogate cable” was installed at 15 cm depth. Most notably, mean nitrate concentrations for the 1st year following disturbance were 744 μeq l-1 at 15 cm depth compared to 7 μeq l-1 for the non-disturbed control. A comparison of pilot plots with 5 cm cable depth and an unheated soil-warming control plot with the same cable disturbance showed that the seasonality of soil disturbance may have a key role in response to disturbance. The soil solution response was diminished if installation occurred during the spring, a period of rapid uptake of nitrogen by vegetation. Mean nitrate concentrations were 176 μeq l-1 for 5-cm pilot plots (installed in fall 1991) versus 6 μeq l-1 for 5-cm, unheated soil-warming control plots (installed in spring 1992). Disturbance effects were attenuated over time and not generally apparent 1 year after installation.
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  • 97
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    Biology and fertility of soils 22 (1996), S. 184-190 
    ISSN: 1432-0789
    Keywords: Key words Cropping systems ; Soil organic matter ; Nitrogen ; Phosphorus ; Potassium
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The effects of up to 23 years of agricultural cropping of a boreal forest soil on soil organic carbon (SOC) and N, P, and K pools were studied. The cropping systems studied were: (a) continuous barley, (b) continuous forage bromegrass, (c) continuous forage legume, and (d) barley/grass-legume forage rotation. Continuous bromegrass increased while other cropping systems decreased SOC in the surface soil. Kjeldahl N in soil approximately followed the trend in SOC. The net gain in N under continuous grass was attributed mostly to nonsymbiotic N fixation. Changes in SOC content appeared to be also influenced by cropping and tillage frequencies. Changes in fixed (intercalary) ammonium were small. There was no measurable change in total P, in part, because input was only slightly higher than crop offtake. Organic P increased under continuous bromegrass, and tended to decrease under continuous legume. The C/N and C/P ratios of soil organic matter decreased slightly with cropping. Exchangeable K (Kex) was decreased by cropping systems containing a legume crop to a greater extent than those without a legume crop. Most of the decrease occurred in the 0–15 cm depth. Nitric acid extractable K was not affected by cropping. Since net loss of Kex to 30 cm depth was substantially less than crop offtake, it is suggested that subsoil K reserves and matrix K were supplying a major portion of the crops‘ K requirement. It is concluded that the effects of cropping systems on SOC, N, P and K are influenced by crop type, and cropping and tillage frequencies.
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  • 98
    ISSN: 1432-2285
    Keywords: Conifer ; Fluoride ; Nitrogen ; Sulphur dioxide ; Ultrastructure
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Effects of SO2, aqueous fluoride (NaF) and a solution of nitrogen compounds (NH4NO3) on the visible symptoms, pollutant accumulation and ultrastructure of Scots pine (Pinus sylvestris L.) and Norway spruce [Picea abies (L.) Karst.] seedlings were studied in an open-air experiment lasting for 3 consecutive years. Visible injury symptoms were most pronounced in combination exposures and whenever F was applied. Visible symptoms correlated well with needle pollutant concentrations. Exposure to NaF increased needle F contents particularly when F was applied with SO2 or NH4NO3. This suggests that a reduction in N or SO2 emissions, in F polluted areas, could improve the condition of conifers via decreased accumulation of phytotoxic F in the needles. Norway spruce needles accumulated 2–10 times as much S and F as those of Scots pine. Microscopic observations showed various changes in the needle mesophyll cell ultrastructure. In both species, exposure to SO2 increased significantly the amount of cytoplasmic vacuoles, suggesting detoxification of excess sulphate or low pH. F treatments resulted in a significant enlargement of plastoglobuli in Scots pine and a darkening of plastoglobuli in Norway spruce. All exposures enhanced the accumulation of lipid bodies. An increased portion of translucent plastoglobuli was most pronounced in N treatments. Many of the ultrastructural changes and visible symptoms appeared only as number of years exposed increased, indicating that long-term experiments are needed. Both visible symptoms and ultrastructural changes pointed to the more pronounced sensitivity of Norway spruce compared to Scots pine. Ultrastructural results mostly supported earlier qualitative observations of F, N and SO2 effects on needle mesophyll cell ultrastructure. However, no reduction of thylakoids in SO2 containing exposure or curling of thylakoids in F exposure could be detected in the present study.
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  • 99
    ISSN: 1432-2285
    Keywords: Nitrogen ; Picea sitchensis ; Relative growth rates ; Thuja plicata ; Tsuga heterophylla
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Seedlings ofPicea sitchensis, Thuja plicata andTsuga heterophylla were supplied N hydroponically at one of four exponentially increasing rates of addition (0.09, 0.07, 0.05, or 0.025 gN-1 day-1) for up to 3 months in a naturally illuminated glasshouse. Relative growth rates (RGR) were analyzed as a function of N uptake, the allocation of assimilated N to foliage (LNFR), foliar N concentrations (Nla) and met assimilation rates (NAR), which were combined to estimate N productivity (RGR per unit whole-plant N concentration). Nitrogen accumulation, biomass and N partitioning and RGR and its components varied with species in response to the different N regimes.T. heterophylla had the lowest maximum wholeplant N concentrations (wpN) and specific absorption rates for N and exhibited the least plasticity in root: shoot ratios as wpN increased from 11–21 mg g-1. In all species, RGR increased linearly with wpN, while LNFR increased curvilinearly. Foliar N (Nla) increased linearly with wpN and NAR increased linearly with Nla. The RGRs ofT. heterophylla were highest at wpNs up to 18 mg g-1, a result of higher foliar N use efficiencies (NAR/Nla). However, RGR increased more with wpN inT. plicata andP. sitchensis. Although LNFR increased with wpN in all species, foliar N use efficiency declined, possibly due to an increased partitioning of foliar soluble N to non-photosynthetic compounds. Thus, in each species, N productivity did not increase above intermediate levels of wpN: 14 mg g-1 inT. heterophylla, 16 mg g-1 inP. sitchensis and 17 mg g-1 inT. plicata.
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  • 100
    ISSN: 1432-2285
    Keywords: Nitrogen ; Photosynthesis ; Picea sitchensis ; Thuja plicata ; Tsuga heterophylla
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The effects of differing, exponentially increasing rates of N addition (0.025, 0.05, 0.07 and 0.09 gN gN-1day-1) on photosynthesis, discrimination against13C and partitioning of foliar N to chlorophyll and major photosynthetic proteins were compared in seedlings of the evergreen conifersPicea sitchensis, Thuja plicata andTsuga heterophylla. T. heterophylla had the lowest range of foliar N concentrations (Nlm). Across species, photosynthetic rates (A) increased linearly with Nlm to a maximum at 21 mg g-1 and declined at higher Nlms. Species differences inA resulted from differences in Nlm, not from differences in photosynthetic N use efficiency. Self-shading may have causedA to decline at a high Nlm inP. sitchensis andT. plicata. Measurements of gas exchange and δ13C suggested that carboxylation capacity increased more than did stomatal conductance as Nlm increased. The responses were small and confined to Nlms associated with the lesser rates of N addition. Concentrations of total protein, ribulose 1,5-bisphosphate carboxylase (RUBISCO) and the light harvesting chlorophyll a/b protein complex (LHC) increased with Nlm, but the fraction of foliar N allocated to RUBISCO and LHC increased with Nlm only inP. sitchensis and only between the 0.025 and 0.05N regimes. The responsiveness ofA and concentrations of RUBISCO to Nlm were less than reported for deciduous C3 species.
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