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  • United States  (182)
  • Models, Biological  (69)
  • Nature Publishing Group (NPG)  (249)
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  • 1
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    Nature Publishing Group (NPG)
    Publication Date: 2011-01-12
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Cassiday, Laura -- England -- Nature. 2010 Dec 9;468(7325):857-8.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21222299" target="_blank"〉PubMed〈/a〉
    Keywords: Centers for Disease Control and Prevention (U.S.) ; Disease Outbreaks/prevention & control/statistics & numerical data ; Food Contamination/*prevention & control/statistics & numerical data ; Food Industry/manpower/methods/standards ; *Food Safety/methods ; Foodborne Diseases/epidemiology/microbiology/prevention & control ; Humans ; Public Health/legislation & jurisprudence/manpower/standards/statistics & ; numerical data ; *Sentinel Surveillance ; United States ; United States Department of Agriculture ; United States Food and Drug Administration
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    Electronic ISSN: 1476-4687
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  • 2
    Publication Date: 2011-02-26
    Description: Mammalian prions cause fatal neurodegenerative conditions including Creutzfeldt-Jakob disease in humans and scrapie and bovine spongiform encephalopathy in animals. Prion infections are typically associated with remarkably prolonged but highly consistent incubation periods followed by a rapid clinical phase. The relationship between prion propagation, generation of neurotoxic species and clinical onset has remained obscure. Prion incubation periods in experimental animals are known to vary inversely with expression level of cellular prion protein. Here we demonstrate that prion propagation in brain proceeds via two distinct phases: a clinically silent exponential phase not rate-limited by prion protein concentration which rapidly reaches a maximal prion titre, followed by a distinct switch to a plateau phase. The latter determines time to clinical onset in a manner inversely proportional to prion protein concentration. These findings demonstrate an uncoupling of infectivity and toxicity. We suggest that prions themselves are not neurotoxic but catalyse the formation of such species from PrP(C). Production of neurotoxic species is triggered when prion propagation saturates, leading to a switch from autocatalytic production of infectivity (phase 1) to a toxic (phase 2) pathway.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Sandberg, Malin K -- Al-Doujaily, Huda -- Sharps, Bernadette -- Clarke, Anthony R -- Collinge, John -- MC_U123160656/Medical Research Council/United Kingdom -- MC_U123192748/Medical Research Council/United Kingdom -- Medical Research Council/United Kingdom -- England -- Nature. 2011 Feb 24;470(7335):540-2. doi: 10.1038/nature09768.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉MRC Prion Unit and Department of Neurodegenerative Disease, UCL Institute of Neurology, Queen Square, London WC1N 3BG, UK.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21350487" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Biocatalysis ; Biological Assay ; Disease Models, Animal ; Gene Expression ; Kinetics ; Mice ; Mice, Transgenic ; Models, Biological ; PrPC Proteins/analysis/biosynthesis/genetics/metabolism ; PrPSc Proteins/biosynthesis/*metabolism/*pathogenicity/toxicity ; Prion Diseases/*metabolism/*pathology/physiopathology/transmission ; Survival Rate ; Time Factors ; Toxicity Tests
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  • 3
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    Nature Publishing Group (NPG)
    Publication Date: 2011-08-30
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Sanderson, Katharine -- England -- Nature. 2011 Aug 25;476(7361):477-8.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21870357" target="_blank"〉PubMed〈/a〉
    Keywords: Astronauts/economics/*education/*supply & distribution ; Humans ; *Private Sector/economics ; Research Personnel/*education/supply & distribution ; Space Flight/*economics/*manpower ; United States ; United States National Aeronautics and Space Administration/economics ; Weightlessness/adverse effects ; Weightlessness Simulation
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  • 4
    Publication Date: 2011-07-08
    Description: A central challenge for predators is achieving positive energy balance when prey are spatially and temporally heterogeneous. Ecological heterogeneity produces evolutionary trade-offs in the physiological design of predators; this is because the ability to capitalize on pulses of food abundance requires high capacity for food-processing, yet maintaining such capacity imposes energetic costs that are taxing during periods of food scarcity. Recent advances in physiology show that when variation in foraging opportunities is predictable, animals may adjust energetic trade-offs by rapidly modulating their digestive system to track variation in foraging opportunities. However, it is increasingly recognized that foraging opportunities for animals are unpredictable, which should favour animals that maintain a capacity for food-processing that exceeds average levels of consumption (loads). Despite this basic principle of quantitative evolutionary design, estimates of digestive load:capacity ratios in wild animals are virtually non-existent. Here we provide an extensive assessment of load:capacity ratios for the digestive systems of predators in the wild, compiling 639 estimates across 38 species of fish. We found that piscine predators typically maintain the physiological capacity to feed at daily rates 2-3 times higher than what they experience on average. A numerical simulation of the trade-off between food-processing capacity and metabolic cost suggests that the observed level of physiological opportunism is profitable only if predator-prey encounters, and thus predator energy budgets, are far more variable in nature than currently assumed.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Armstrong, Jonathan B -- Schindler, Daniel E -- England -- Nature. 2011 Jul 6;476(7358):84-7. doi: 10.1038/nature10240.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉School of Aquatic and Fishery Sciences, Box 355020, University of Washington, Seattle, Washington 98195, USA. Jonny99@uw.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21734659" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Biological Evolution ; Digestion/*physiology ; Energy Metabolism/*physiology ; Feeding Behavior/*physiology ; Fishes/*physiology ; Models, Biological ; *Predatory Behavior/physiology ; Starvation/*physiopathology/*veterinary ; Time Factors ; *Uncertainty
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  • 5
    Publication Date: 2011-01-21
    Description: Many tumours are composed of genetically diverse cells; however, little is known about how diversity evolves or the impact that diversity has on functional properties. Here, using xenografting and DNA copy number alteration (CNA) profiling of human BCR-ABL1 lymphoblastic leukaemia, we demonstrate that genetic diversity occurs in functionally defined leukaemia-initiating cells and that many diagnostic patient samples contain multiple genetically distinct leukaemia-initiating cell subclones. Reconstructing the subclonal genetic ancestry of several samples by CNA profiling demonstrated a branching multi-clonal evolution model of leukaemogenesis, rather than linear succession. For some patient samples, the predominant diagnostic clone repopulated xenografts, whereas in others it was outcompeted by minor subclones. Reconstitution with the predominant diagnosis clone was associated with more aggressive growth properties in xenografts, deletion of CDKN2A and CDKN2B, and a trend towards poorer patient outcome. Our findings link clonal diversity with leukaemia-initiating-cell function and underscore the importance of developing therapies that eradicate all intratumoral subclones.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Notta, Faiyaz -- Mullighan, Charles G -- Wang, Jean C Y -- Poeppl, Armando -- Doulatov, Sergei -- Phillips, Letha A -- Ma, Jing -- Minden, Mark D -- Downing, James R -- Dick, John E -- Canadian Institutes of Health Research/Canada -- England -- Nature. 2011 Jan 20;469(7330):362-7. doi: 10.1038/nature09733.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Division of Stem Cell and Developmental Biology, Campbell Family Institute for Cancer Research/Ontario Cancer Institute, Toronto, Ontario M5G 1L7, Canada.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21248843" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Cell Survival ; Clone Cells/*metabolism/*pathology ; Cyclin-Dependent Kinase Inhibitor p15/deficiency/genetics ; DNA Copy Number Variations/genetics ; Disease Progression ; *Evolution, Molecular ; Fusion Proteins, bcr-abl/*genetics ; Genes, p16 ; Humans ; Mice ; Mice, Inbred NOD ; Mice, SCID ; Models, Biological ; Neoplasm Transplantation ; Oligonucleotide Array Sequence Analysis ; Philadelphia Chromosome ; Polymorphism, Single Nucleotide/genetics ; Precursor Cell Lymphoblastic Leukemia-Lymphoma/*genetics/*pathology ; Survival Rate ; Transplantation, Heterologous
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  • 6
    Publication Date: 2011-03-11
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Chouard, Tanguy -- England -- Nature. 2011 Mar 10;471(7337):151-3. doi: 10.1038/471151a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21390105" target="_blank"〉PubMed〈/a〉
    Keywords: CREB-Binding Protein/metabolism ; Calcineurin/chemistry/metabolism ; Cell Cycle Proteins/chemistry/metabolism ; Computational Biology ; Crystallization ; Cyclic AMP Response Element-Binding Protein/chemistry/metabolism ; Cyclin-Dependent Kinase Inhibitor Proteins/chemistry/metabolism ; F-Box Proteins/chemistry/metabolism ; Humans ; Models, Biological ; Models, Molecular ; Pliability ; Protein Conformation ; Protein Folding ; *Protein Unfolding ; Proteins/*chemistry/*metabolism ; Saccharomyces cerevisiae Proteins/chemistry/metabolism ; Structure-Activity Relationship ; Tumor Suppressor Protein p53/chemistry/metabolism ; Ubiquitin-Protein Ligases/chemistry/metabolism
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  • 7
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    Nature Publishing Group (NPG)
    Publication Date: 2011-06-17
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Ball, Philip -- England -- Nature. 2011 Jun 15;474(7351):272-4. doi: 10.1038/474272a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21677723" target="_blank"〉PubMed〈/a〉
    Keywords: Animal Migration ; Animals ; Birds/physiology ; *Life ; Magnetics ; Models, Biological ; Nature ; Photosynthesis/physiology ; *Quantum Theory
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  • 8
    Publication Date: 2011-09-23
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Finkbeiner, Ann -- England -- Nature. 2011 Sep 21;477(7365):397-9. doi: 10.1038/477397a.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉anniekf@gmail.com〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21938048" target="_blank"〉PubMed〈/a〉
    Keywords: Advisory Committees/economics/*history/*organization & administration/trends ; Biological Warfare/prevention & control ; Consultants ; *Federal Government ; History, 20th Century ; History, 21st Century ; Military Science/economics/*history/*manpower ; Security Measures ; United States ; United States Department of Defense/economics/organization & administration
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  • 9
    Publication Date: 2011-05-13
    Description: Protein translocation across the bacterial membrane, mediated by the secretory translocon SecYEG and the SecA ATPase, is enhanced by proton motive force and membrane-integrated SecDF, which associates with SecYEG. The role of SecDF has remained unclear, although it is proposed to function in later stages of translocation as well as in membrane protein biogenesis. Here, we determined the crystal structure of Thermus thermophilus SecDF at 3.3 A resolution, revealing a pseudo-symmetrical, 12-helix transmembrane domain belonging to the RND superfamily and two major periplasmic domains, P1 and P4. Higher-resolution analysis of the periplasmic domains suggested that P1, which binds an unfolded protein, undergoes functionally important conformational changes. In vitro analyses identified an ATP-independent step of protein translocation that requires both SecDF and proton motive force. Electrophysiological analyses revealed that SecDF conducts protons in a manner dependent on pH and the presence of an unfolded protein, with conserved Asp and Arg residues at the transmembrane interface between SecD and SecF playing essential roles in the movements of protons and preproteins. Therefore, we propose that SecDF functions as a membrane-integrated chaperone, powered by proton motive force, to achieve ATP-independent protein translocation.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3697915/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3697915/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Tsukazaki, Tomoya -- Mori, Hiroyuki -- Echizen, Yuka -- Ishitani, Ryuichiro -- Fukai, Shuya -- Tanaka, Takeshi -- Perederina, Anna -- Vassylyev, Dmitry G -- Kohno, Toshiyuki -- Maturana, Andres D -- Ito, Koreaki -- Nureki, Osamu -- R01 GM074840/GM/NIGMS NIH HHS/ -- England -- Nature. 2011 May 11;474(7350):235-8. doi: 10.1038/nature09980.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biophysics and Biochemistry, Graduate School of Science, The University of Tokyo, Bunkyo-ku, Tokyo 113-0032, Japan.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21562494" target="_blank"〉PubMed〈/a〉
    Keywords: Adenosine Triphosphate/metabolism ; Arginine/metabolism ; Asparagine/metabolism ; Bacterial Proteins/*chemistry/*metabolism ; Crystallography, X-Ray ; Hydrogen-Ion Concentration ; Membrane Proteins/*chemistry/*metabolism ; Membrane Transport Proteins/*chemistry/*metabolism ; Models, Biological ; Models, Molecular ; Nuclear Magnetic Resonance, Biomolecular ; Periplasm/chemistry/metabolism ; Protein Structure, Tertiary ; Protein Transport ; Protein Unfolding ; Proton-Motive Force ; Static Electricity ; Structure-Activity Relationship ; Thermus thermophilus/*chemistry/cytology
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  • 10
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    Nature Publishing Group (NPG)
    Publication Date: 2011-01-07
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Schmidhuber, Jurgen -- England -- Nature. 2011 Jan 6;469(7328):34. doi: 10.1038/469034b.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21209647" target="_blank"〉PubMed〈/a〉
    Keywords: *Bibliometrics ; Economic Development/statistics & numerical data ; Europe ; Reproducibility of Results ; Research/economics/*standards ; United States ; Universities/economics/standards
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  • 11
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    Nature Publishing Group (NPG)
    Publication Date: 2011-02-12
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Gewin, Virginia -- England -- Nature. 2011 Jan 13;469(7329):255-7.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21312385" target="_blank"〉PubMed〈/a〉
    Keywords: Academies and Institutes/organization & administration ; Awards and Prizes ; Civil Rights/legislation & jurisprudence/*standards ; *Disabled Persons/psychology/statistics & numerical data ; Education, Graduate/statistics & numerical data ; *Employment/statistics & numerical data ; Europe ; Fellowships and Scholarships/statistics & numerical data ; Mentors ; Prejudice ; *Research Personnel/economics/psychology/statistics & numerical data ; United States
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  • 12
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    Nature Publishing Group (NPG)
    Publication Date: 2011-09-09
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Zimmerman, Peter D -- England -- Nature. 2011 Sep 7;477(7363):153-4. doi: 10.1038/477153a.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of War Studies, King's College London, Strand, London WC2R 2LS, UK. peter.zimmerman@cox.net〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21900991" target="_blank"〉PubMed〈/a〉
    Keywords: History, 21st Century ; Humans ; Security Measures/economics/*history/legislation & jurisprudence/*organization & ; administration ; *September 11 Terrorist Attacks ; Terrorism/history/prevention & control ; United States ; United States Department of Homeland Security/economics/history/legislation & ; jurisprudence/*organization & administration
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  • 13
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    Nature Publishing Group (NPG)
    Publication Date: 2011-03-25
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Jonietz, Erika -- England -- Nature. 2011 Mar 24;471(7339):S20-1. doi: 10.1038/471S20a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21430717" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Azasteroids/pharmacology ; Biomarkers, Tumor/analysis/blood ; Clinical Trials as Topic/adverse effects/*methods ; Disease Models, Animal ; Drug Approval/legislation & jurisprudence ; Dutasteride ; Health ; Humans ; Male ; Neoplasms/blood/diagnosis/*prevention & control ; Prostatic Neoplasms/prevention & control ; Reproducibility of Results ; Risk Assessment ; United States ; United States Food and Drug Administration/legislation & jurisprudence
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  • 14
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    Nature Publishing Group (NPG)
    Publication Date: 2011-08-13
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Garber, Janet C -- England -- Nature. 2011 Aug 10;476(7359):152. doi: 10.1038/476152a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21833072" target="_blank"〉PubMed〈/a〉
    Keywords: Animal Welfare/*standards ; Animals ; *Animals, Laboratory/physiology/psychology ; Female ; *Guidelines as Topic ; Male ; United States
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  • 15
    Publication Date: 2011-07-22
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Berendzen, Richard -- England -- Nature. 2011 Jul 20;475(7356):295. doi: 10.1038/475295a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21776064" target="_blank"〉PubMed〈/a〉
    Keywords: Astronauts/trends ; Astronomy ; Earth (Planet) ; Exobiology ; Human Characteristics ; *Motion Pictures as Topic ; Space Flight/*methods/*trends ; United States ; United States National Aeronautics and Space Administration/trends
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  • 16
    Publication Date: 2011-08-09
    Description: Cytokinesis, the physical separation of daughter cells at the end of mitosis, requires precise regulation of the mechanical properties of the cell periphery. Although studies of cytokinetic mechanics mostly focus on the equatorial constriction ring, a contractile actomyosin cortex is also present at the poles of dividing cells. Whether polar forces influence cytokinetic cell shape and furrow positioning remains an open question. Here we demonstrate that the polar cortex makes cytokinesis inherently unstable. We show that limited asymmetric polar contractions occur during cytokinesis, and that perturbing the polar cortex leads to cell shape oscillations, resulting in furrow displacement and aneuploidy. A theoretical model based on a competition between cortex turnover and contraction dynamics accurately accounts for the oscillations. We further propose that membrane blebs, which commonly form at the poles of dividing cells and whose role in cytokinesis has long been enigmatic, stabilize cell shape by acting as valves releasing cortical contractility. Our findings reveal an inherent instability in the shape of the dividing cell and unveil a novel, spindle-independent mechanism ensuring the stability of cleavage furrow positioning.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Sedzinski, Jakub -- Biro, Mate -- Oswald, Annelie -- Tinevez, Jean-Yves -- Salbreux, Guillaume -- Paluch, Ewa -- England -- Nature. 2011 Aug 7;476(7361):462-6. doi: 10.1038/nature10286.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Max Planck Institute of Molecular Cell Biology and Genetics, 01307 Dresden, Germany.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21822289" target="_blank"〉PubMed〈/a〉
    Keywords: Actomyosin/*metabolism ; Amides/pharmacology ; Aneuploidy ; Cell Line ; Cell Shape/drug effects/*physiology ; Cell Size/drug effects ; Cytokinesis/drug effects/*physiology ; HeLa Cells ; Humans ; Models, Biological ; Pyridines/pharmacology
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  • 17
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    Nature Publishing Group (NPG)
    Publication Date: 2011-12-23
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Gilbert, Natasha -- England -- Nature. 2011 Dec 21;480(7378):S98-9. doi: 10.1038/480S98a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22190094" target="_blank"〉PubMed〈/a〉
    Keywords: *Drug and Narcotic Control ; Europe ; Herbal Medicine/*legislation & jurisprudence ; Humans ; United States
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  • 18
    Publication Date: 2011-03-23
    Description: The nucleobase/ascorbate transporter (NAT) proteins, also known as nucleobase/cation symporter 2 (NCS2) proteins, are responsible for the uptake of nucleobases in all kingdoms of life and for the transport of vitamin C in mammals. Despite functional characterization of the NAT family members in bacteria, fungi and mammals, detailed structural information remains unavailable. Here we report the crystal structure of a representative NAT protein, the Escherichia coli uracil/H(+) symporter UraA, in complex with uracil at a resolution of 2.8 A. UraA has a novel structural fold, with 14 transmembrane segments (TMs) divided into two inverted repeats. A pair of antiparallel beta-strands is located between TM3 and TM10 and has an important role in structural organization and substrate recognition. The structure is spatially arranged into a core domain and a gate domain. Uracil, located at the interface between the two domains, is coordinated mainly by residues from the core domain. Structural analysis suggests that alternating access of the substrate may be achieved through conformational changes of the gate domain.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Lu, Feiran -- Li, Shuo -- Jiang, Yang -- Jiang, Jing -- Fan, He -- Lu, Guifeng -- Deng, Dong -- Dang, Shangyu -- Zhang, Xu -- Wang, Jiawei -- Yan, Nieng -- England -- Nature. 2011 Apr 14;472(7342):243-6. doi: 10.1038/nature09885. Epub 2011 Mar 20.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉State Key Laboratory of Bio-membrane and Membrane Biotechnology, Center for Structural Biology, School of Life Sciences, Tsinghua University, Beijing 100084, China.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21423164" target="_blank"〉PubMed〈/a〉
    Keywords: Biological Transport ; Crystallography, X-Ray ; Escherichia coli/*chemistry ; Escherichia coli Proteins/*chemistry/*metabolism ; Hydrogen Bonding ; Membrane Transport Proteins/*chemistry/*metabolism ; Models, Biological ; Models, Molecular ; Protein Folding ; Protein Structure, Secondary ; Protein Structure, Tertiary ; Protons ; Structure-Activity Relationship ; Uracil/chemistry/*metabolism
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  • 19
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    Nature Publishing Group (NPG)
    Publication Date: 2011-04-09
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Cooper, Matthew A -- Shlaes, David -- England -- Nature. 2011 Apr 7;472(7341):32. doi: 10.1038/472032a.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Institute for Molecular Bioscience, University of Queensland, Brisbane St Lucia, QLD 4072, Australia. m.cooper@imb.uq.edu.au〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21475175" target="_blank"〉PubMed〈/a〉
    Keywords: *Anti-Bacterial Agents/biosynthesis/economics ; Clinical Trials, Phase III as Topic/economics ; Drug Design ; Drug Discovery/economics/legislation & jurisprudence/*methods/*trends ; Drug Industry/economics/legislation & jurisprudence/*trends ; *Drug Resistance, Bacterial ; Federal Government ; Humans ; International Cooperation ; Leadership ; Models, Economic ; United States ; United States Food and Drug Administration/legislation & jurisprudence
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  • 20
    Publication Date: 2011-02-11
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Macilwain, Colin -- England -- Nature. 2011 Feb 10;470(7333):141. doi: 10.1038/470141a.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Nature. cfmworldview@gmail.com〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21307893" target="_blank"〉PubMed〈/a〉
    Keywords: Biomedical Research/economics ; Biotechnology/economics ; Drug Industry/economics/*legislation & jurisprudence/*methods/organization & ; administration ; *Government Regulation ; Great Britain ; Investments/economics/statistics & numerical data ; National Institutes of Health (U.S.)/economics ; Patents as Topic/legislation & jurisprudence ; *Policy Making ; United States
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  • 21
    Publication Date: 2011-10-21
    Description: Climate change is driving latitudinal and altitudinal shifts in species distribution worldwide, leading to novel species assemblages. Lags between these biotic responses and contemporary climate changes have been reported for plants and animals. Theoretically, the magnitude of these lags should be greatest in lowland areas, where the velocity of climate change is expected to be much greater than that in highland areas. We compared temperature trends to temperatures reconstructed from plant assemblages (observed in 76,634 surveys) over a 44-year period in France (1965-2008). Here we report that forest plant communities had responded to 0.54 degrees C of the effective increase of 1.07 degrees C in highland areas (500-2,600 m above sea level), while they had responded to only 0.02 degrees C of the 1.11 degrees C warming trend in lowland areas. There was a larger temperature lag (by 3.1 times) between the climate and plant community composition in lowland forests than in highland forests. The explanation of such disparity lies in the following properties of lowland, as compared to highland, forests: the higher proportion of species with greater ability for local persistence as the climate warms, the reduced opportunity for short-distance escapes, and the greater habitat fragmentation. Although mountains are currently considered to be among the ecosystems most threatened by climate change (owing to mountaintop extinction), the current inertia of plant communities in lowland forests should also be noted, as it could lead to lowland biotic attrition.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Bertrand, Romain -- Lenoir, Jonathan -- Piedallu, Christian -- Riofrio-Dillon, Gabriela -- de Ruffray, Patrice -- Vidal, Claude -- Pierrat, Jean-Claude -- Gegout, Jean-Claude -- England -- Nature. 2011 Oct 19;479(7374):517-20. doi: 10.1038/nature10548.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉AgroParisTech, ENGREF, UMR1092 Laboratoire d'Etude des Ressources Foret-Bois (LERFoB), 14 rue Girardet, F-54000 Nancy, France. romain.bertrand@engref.agroparistech.fr〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22012261" target="_blank"〉PubMed〈/a〉
    Keywords: Altitude ; *Biota ; France ; Global Warming/*statistics & numerical data ; History, 20th Century ; History, 21st Century ; Models, Biological ; *Plants ; Temperature ; Time Factors ; *Trees
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  • 22
    Publication Date: 2011-01-07
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Semeniuk, Ivan -- Wadman, Meredith -- Samuel Reich, Eugenie -- Tollefson, Jeff -- England -- Nature. 2011 Jan 6;469(7328):9-10. doi: 10.1038/469009a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21209632" target="_blank"〉PubMed〈/a〉
    Keywords: Climate Change ; Conservation of Energy Resources/legislation & jurisprudence ; *Federal Government ; Food Safety ; Nuclear Weapons/legislation & jurisprudence ; *Politics ; Public Policy/economics/legislation & jurisprudence ; Research Support as Topic/*legislation & jurisprudence ; Science/*economics/*legislation & jurisprudence ; Stem Cell Research/economics/legislation & jurisprudence ; United States ; United States Food and Drug Administration/legislation & jurisprudence
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  • 23
    Publication Date: 2011-10-21
    Description: The radiation of the mammals provides a 165-million-year test case for evolutionary theories of how species occupy and then fill ecological niches. It is widely assumed that species often diverge rapidly early in their evolution, and that this is followed by a longer, drawn-out period of slower evolutionary fine-tuning as natural selection fits organisms into an increasingly occupied niche space. But recent studies have hinted that the process may not be so simple. Here we apply statistical methods that automatically detect temporal shifts in the rate of evolution through time to a comprehensive mammalian phylogeny and data set of body sizes of 3,185 extant species. Unexpectedly, the majority of mammal species, including two of the most speciose orders (Rodentia and Chiroptera), have no history of substantial and sustained increases in the rates of evolution. Instead, a subset of the mammals has experienced an explosive increase (between 10- and 52-fold) in the rate of evolution along the single branch leading to the common ancestor of their monophyletic group (for example Chiroptera), followed by a quick return to lower or background levels. The remaining species are a taxonomically diverse assemblage showing a significant, sustained increase or decrease in their rates of evolution. These results necessarily decouple morphological diversification from speciation and suggest that the processes that give rise to the morphological diversity of a class of animals are far more free to vary than previously considered. Niches do not seem to fill up, and diversity seems to arise whenever, wherever and at whatever rate it is advantageous.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Venditti, Chris -- Meade, Andrew -- Pagel, Mark -- England -- Nature. 2011 Oct 19;479(7373):393-6. doi: 10.1038/nature10516.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biological Sciences, University of Hull, Hull HU6 7RX, UK. c.venditti@hull.ac.uk〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22012260" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; *Biodiversity ; *Biological Evolution ; Body Size ; Genetic Speciation ; Mammals/anatomy & histology/classification/*physiology ; Models, Biological ; Phylogeny ; Time Factors
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  • 24
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    Nature Publishing Group (NPG)
    Publication Date: 2011-06-17
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉England -- Nature. 2011 Jun 15;474(7351):252. doi: 10.1038/474252a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21677704" target="_blank"〉PubMed〈/a〉
    Keywords: Animal Experimentation/ethics/*legislation & jurisprudence ; Animal Welfare/ethics/standards ; Animals ; Biomedical Research/ethics/legislation & jurisprudence/methods ; *Disease Models, Animal ; Federal Government ; Hepacivirus/physiology ; Humans ; National Institutes of Health (U.S.) ; *Pan troglodytes/virology ; United States ; Viral Hepatitis Vaccines
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  • 25
    Publication Date: 2011-01-14
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Qiu, Jane -- England -- Nature. 2011 Jan 13;469(7329):145. doi: 10.1038/469145a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21228847" target="_blank"〉PubMed〈/a〉
    Keywords: Air ; Animals ; Antarctic Regions ; Arctic Regions ; *Ecosystem ; *Global Warming ; Ice Cover ; *National Academy of Sciences (U.S.) ; Research/instrumentation/*organization & administration/trends ; *Research Report ; Temperature ; United States
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  • 26
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    Nature Publishing Group (NPG)
    Publication Date: 2011-05-07
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Wadman, Meredith -- England -- Nature. 2011 May 5;473(7345):15.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21548188" target="_blank"〉PubMed〈/a〉
    Keywords: Jurisprudence ; National Institutes of Health (U.S.) ; Stem Cell Research/*economics ; United States
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  • 27
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    Nature Publishing Group (NPG)
    Publication Date: 2011-04-02
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Wadman, Meredith -- England -- Nature. 2011 Mar 31;471(7340):558. doi: 10.1038/471558a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21455147" target="_blank"〉PubMed〈/a〉
    Keywords: Age Factors ; Financing, Organized/*organization & administration ; *National Institutes of Health (U.S.)/economics ; Research Personnel/economics/psychology ; Research Support as Topic/*organization & administration ; Time Factors ; United States
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  • 28
    Publication Date: 2011-04-09
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Mann, Adam -- England -- Nature. 2011 Apr 7;472(7341):16-7. doi: 10.1038/472016a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21475167" target="_blank"〉PubMed〈/a〉
    Keywords: *Astronauts/economics/trends ; Federal Government ; Humans ; Space Flight/*economics/*organization & administration/trends ; United States ; United States National Aeronautics and Space Administration/*economics/*trends
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  • 29
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    Nature Publishing Group (NPG)
    Publication Date: 2011-02-11
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Wadman, Meredith -- England -- Nature. 2011 Feb 10;470(7333):156-9. doi: 10.1038/470156a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21307911" target="_blank"〉PubMed〈/a〉
    Keywords: Adult Stem Cells/cytology ; *Embryonic Stem Cells/cytology ; History, 20th Century ; History, 21st Century ; Humans ; Persuasive Communication ; Religion and Science ; Stem Cell Research/ethics/*legislation & jurisprudence ; United States
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  • 30
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    Nature Publishing Group (NPG)
    Publication Date: 2011-03-11
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Mann, Adam -- England -- Nature. 2011 Mar 10;471(7337):146-7. doi: 10.1038/471146a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21390101" target="_blank"〉PubMed〈/a〉
    Keywords: Budgets ; Exobiology ; *Mars ; Research Support as Topic/economics ; Space Flight/*economics ; United States ; United States National Aeronautics and Space Administration/*economics
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  • 31
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    Nature Publishing Group (NPG)
    Publication Date: 2011-08-13
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉England -- Nature. 2011 Aug 10;476(7359):125. doi: 10.1038/476125a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21833048" target="_blank"〉PubMed〈/a〉
    Keywords: Clinical Trials as Topic/*ethics/*standards ; Ethics Committees, Research/*legislation & jurisprudence/*standards ; Human Experimentation/ethics/standards ; Humans ; Multicenter Studies as Topic/ethics/standards ; United States ; United States Food and Drug Administration/legislation & jurisprudence
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  • 32
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    Nature Publishing Group (NPG)
    Publication Date: 2011-08-19
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉McCook, Alison -- England -- Nature. 2011 Aug 17;476(7360):270-2. doi: 10.1038/476270a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21850082" target="_blank"〉PubMed〈/a〉
    Keywords: Academies and Institutes/economics/*organization & administration/trends ; Animals ; Biological Specimen Banks/organization & administration/utilization ; District of Columbia ; Humans ; Military Medicine/*organization & administration ; Paraffin Embedding ; Pathology/*organization & administration ; Phenytoin/adverse effects ; Referral and Consultation ; United States ; United States Government Agencies/economics/*organization & administration/trends
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  • 33
    Publication Date: 2011-09-23
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Weinberger, Sharon -- England -- Nature. 2011 Sep 21;477(7365):386-7. doi: 10.1038/477386a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21938044" target="_blank"〉PubMed〈/a〉
    Keywords: Budgets ; Explosive Agents ; Humans ; Military Science/*economics/statistics & numerical data ; Social Sciences/economics/trends ; Terrorism/economics/prevention & control ; United States ; United States Department of Defense/*economics/organization & administration ; Warfare
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  • 34
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    Nature Publishing Group (NPG)
    Publication Date: 2011-05-13
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉England -- Nature. 2011 May 12;473(7346):123. doi: 10.1038/473123a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21562516" target="_blank"〉PubMed〈/a〉
    Keywords: Science/*education ; United States ; Volunteers
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  • 35
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    Nature Publishing Group (NPG)
    Publication Date: 2011-07-22
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉England -- Nature. 2011 Jul 20;475(7356):265-6. doi: 10.1038/475265b.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21776037" target="_blank"〉PubMed〈/a〉
    Keywords: Biotechnology/*legislation & jurisprudence ; Genetic Engineering/*legislation & jurisprudence ; Plants, Genetically Modified/*genetics ; Poaceae/*genetics ; United States ; United States Department of Agriculture/*legislation & jurisprudence
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  • 36
    Publication Date: 2011-10-28
    Description: Molluscs (snails, octopuses, clams and their relatives) have a great disparity of body plans and, among the animals, only arthropods surpass them in species number. This diversity has made Mollusca one of the best-studied groups of animals, yet their evolutionary relationships remain poorly resolved. Open questions have important implications for the origin of Mollusca and for morphological evolution within the group. These questions include whether the shell-less, vermiform aplacophoran molluscs diverged before the origin of the shelled molluscs (Conchifera) or lost their shells secondarily. Monoplacophorans were not included in molecular studies until recently, when it was proposed that they constitute a clade named Serialia together with Polyplacophora (chitons), reflecting the serial repetition of body organs in both groups. Attempts to understand the early evolution of molluscs become even more complex when considering the large diversity of Cambrian fossils. These can have multiple dorsal shell plates and sclerites or can be shell-less but with a typical molluscan radula and serially repeated gills. To better resolve the relationships among molluscs, we generated transcriptome data for 15 species that, in combination with existing data, represent for the first time all major molluscan groups. We analysed multiple data sets containing up to 216,402 sites and 1,185 gene regions using multiple models and methods. Our results support the clade Aculifera, containing the three molluscan groups with spicules but without true shells, and they support the monophyly of Conchifera. Monoplacophora is not the sister group to other Conchifera but to Cephalopoda. Strong support is found for a clade that comprises Scaphopoda (tusk shells), Gastropoda and Bivalvia, with most analyses placing Scaphopoda and Gastropoda as sister groups. This well-resolved tree will constitute a framework for further studies of mollusc evolution, development and anatomy.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Smith, Stephen A -- Wilson, Nerida G -- Goetz, Freya E -- Feehery, Caitlin -- Andrade, Sonia C S -- Rouse, Greg W -- Giribet, Gonzalo -- Dunn, Casey W -- England -- Nature. 2011 Oct 26;480(7377):364-7. doi: 10.1038/nature10526.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Ecology and Evolutionary Biology, Brown University, Providence, Rhode Island 02912, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22031330" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Bivalvia/classification/genetics ; Cephalopoda/classification/genetics ; Gastropoda/classification/genetics ; Gene Expression Profiling ; Likelihood Functions ; Models, Biological ; Mollusca/*classification/*genetics ; *Phylogeny ; Species Specificity ; Transcriptome/*genetics
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    Nature Publishing Group (NPG)
    Publication Date: 2011-01-14
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Brown, Mark J F -- England -- Nature. 2011 Jan 13;469(7329):169-70. doi: 10.1038/469169a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21228865" target="_blank"〉PubMed〈/a〉
    Keywords: Amphibians/microbiology ; Animals ; Bees/classification/genetics/*parasitology/*physiology ; Conservation of Natural Resources/trends ; *Ecosystem ; Europe ; Extinction, Biological ; Humans ; Models, Biological ; Pollination ; Population Dynamics ; Time Factors ; United States
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  • 38
    Publication Date: 2011-06-10
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Reed, John C -- White, E Lucile -- England -- Nature. 2011 Jun 8;474(7350):161. doi: 10.1038/474161b.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21654789" target="_blank"〉PubMed〈/a〉
    Keywords: Humans ; National Institutes of Health (U.S.)/economics/*organization & administration ; Neglected Diseases/drug therapy/metabolism ; Translational Medical Research/economics/*organization & administration/trends ; United States
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    Publication Date: 2011-03-11
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉England -- Nature. 2011 Mar 10;471(7337):135. doi: 10.1038/471135a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21390083" target="_blank"〉PubMed〈/a〉
    Keywords: Drug Discovery/organization & administration/trends ; National Institutes of Health (U.S.)/economics/*organization & ; administration/trends ; Translational Medical Research/economics/*organization & administration/trends ; United States
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    Nature Publishing Group (NPG)
    Publication Date: 2011-07-08
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉England -- Nature. 2011 Jul 6;475(7354):5. doi: 10.1038/475005a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21734663" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; *Expert Testimony ; *Federal Government ; Humans ; *Policy Making ; Public Policy/*legislation & jurisprudence ; Research ; United States
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  • 41
    Publication Date: 2011-08-19
    Description: Latency and ongoing replication have both been proposed to explain the drug-insensitive human immunodeficiency virus (HIV) reservoir maintained during antiretroviral therapy. Here we explore a novel mechanism for ongoing HIV replication in the face of antiretroviral drugs. We propose a model whereby multiple infections per cell lead to reduced sensitivity to drugs without requiring drug-resistant mutations, and experimentally validate the model using multiple infections per cell by cell-free HIV in the presence of the drug tenofovir. We then examine the drug sensitivity of cell-to-cell spread of HIV, a mode of HIV transmission that can lead to multiple infection events per target cell. Infections originating from cell-free virus decrease strongly in the presence of antiretrovirals tenofovir and efavirenz whereas infections involving cell-to-cell spread are markedly less sensitive to the drugs. The reduction in sensitivity is sufficient to keep multiple rounds of infection from terminating in the presence of drugs. We examine replication from cell-to-cell spread in the presence of clinical drug concentrations using a stochastic infection model and find that replication is intermittent, without substantial accumulation of mutations. If cell-to-cell spread has the same properties in vivo, it may have adverse consequences for the immune system, lead to therapy failure in individuals with risk factors, and potentially contribute to viral persistence and hence be a barrier to curing HIV infection.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Sigal, Alex -- Kim, Jocelyn T -- Balazs, Alejandro B -- Dekel, Erez -- Mayo, Avi -- Milo, Ron -- Baltimore, David -- HHSN266200500035C/PHS HHS/ -- T32 AI089398/AI/NIAID NIH HHS/ -- England -- Nature. 2011 Aug 17;477(7362):95-8. doi: 10.1038/nature10347.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Division of Biology, California Institute of Technology, Pasadena, California 91125, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21849975" target="_blank"〉PubMed〈/a〉
    Keywords: Adenine/analogs & derivatives/pharmacology ; Anti-Retroviral Agents/*pharmacology ; Cell Line ; Drug Resistance, Viral/physiology ; HEK293 Cells ; HIV Infections/transmission/*virology ; HIV-1/drug effects/*physiology ; Humans ; Models, Biological ; Organophosphonates/pharmacology ; Tenofovir ; Virus Replication/drug effects/*physiology
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  • 42
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    Nature Publishing Group (NPG)
    Publication Date: 2011-01-14
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Marris, Emma -- England -- Nature. 2011 Jan 13;469(7329):150-2. doi: 10.1038/469150a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21228850" target="_blank"〉PubMed〈/a〉
    Keywords: Animal Migration ; Animals ; Beetles/physiology ; *Climate Change ; Conservation of Natural Resources/*methods/trends ; Ecology/*methods/trends ; *Ecosystem ; Extinction, Biological ; Fires/statistics & numerical data ; Gene Pool ; Population Dynamics ; Temperature ; Trees/growth & development/parasitology ; United States ; *Wilderness
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  • 43
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    Nature Publishing Group (NPG)
    Publication Date: 2011-07-08
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉England -- Nature. 2011 Jul 6;475(7354):5-6. doi: 10.1038/475005b.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21734662" target="_blank"〉PubMed〈/a〉
    Keywords: *Conflict of Interest ; Scientific Misconduct/*legislation & jurisprudence ; United States ; United States Government Agencies/*ethics/*legislation & ; jurisprudence/organization & administration ; Whistleblowing/legislation & jurisprudence
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  • 44
    Publication Date: 2011-04-23
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Reich, Eugenie Samuel -- Semeniuk, Ivan -- Tollefson, Jeff -- Wadman, Meredith -- England -- Nature. 2011 Apr 21;472(7343):267-9. doi: 10.1038/472267a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21512542" target="_blank"〉PubMed〈/a〉
    Keywords: Budgets/*legislation & jurisprudence/*trends ; *Federal Government ; Humans ; Science/*economics/trends ; United States ; United States Government Agencies/*economics/legislation & jurisprudence/trends
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  • 45
    Publication Date: 2011-07-22
    Description: The impressive capabilities of the mammalian brain--ranging from perception, pattern recognition and memory formation to decision making and motor activity control--have inspired their re-creation in a wide range of artificial intelligence systems for applications such as face recognition, anomaly detection, medical diagnosis and robotic vehicle control. Yet before neuron-based brains evolved, complex biomolecular circuits provided individual cells with the 'intelligent' behaviour required for survival. However, the study of how molecules can 'think' has not produced an equal variety of computational models and applications of artificial chemical systems. Although biomolecular systems have been hypothesized to carry out neural-network-like computations in vivo and the synthesis of artificial chemical analogues has been proposed theoretically, experimental work has so far fallen short of fully implementing even a single neuron. Here, building on the richness of DNA computing and strand displacement circuitry, we show how molecular systems can exhibit autonomous brain-like behaviours. Using a simple DNA gate architecture that allows experimental scale-up of multilayer digital circuits, we systematically transform arbitrary linear threshold circuits (an artificial neural network model) into DNA strand displacement cascades that function as small neural networks. Our approach even allows us to implement a Hopfield associative memory with four fully connected artificial neurons that, after training in silico, remembers four single-stranded DNA patterns and recalls the most similar one when presented with an incomplete pattern. Our results suggest that DNA strand displacement cascades could be used to endow autonomous chemical systems with the capability of recognizing patterns of molecular events, making decisions and responding to the environment.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Qian, Lulu -- Winfree, Erik -- Bruck, Jehoshua -- England -- Nature. 2011 Jul 20;475(7356):368-72. doi: 10.1038/nature10262.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Bioengineering, California Institute of Technology, Pasadena, California 91125, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21776082" target="_blank"〉PubMed〈/a〉
    Keywords: Biomimetics ; *Computers, Molecular ; DNA/analysis/*chemistry ; Decision Making ; Memory ; Models, Biological ; Nanotechnology ; *Neural Networks (Computer) ; Neurons ; Synthetic Biology
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  • 46
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    Nature Publishing Group (NPG)
    Publication Date: 2011-09-17
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Brumfiel, Geoff -- England -- Nature. 2011 Sep 13;477(7364):258. doi: 10.1038/477258a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21921890" target="_blank"〉PubMed〈/a〉
    Keywords: Academies and Institutes/*organization & administration ; Great Britain ; National Academy of Sciences (U.S.) ; *Policy Making ; United States
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  • 47
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    Nature Publishing Group (NPG)
    Publication Date: 2011-05-20
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Witze, Alexandra -- England -- Nature. 2011 May 19;473(7347):262-3. doi: 10.1038/473262a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21593831" target="_blank"〉PubMed〈/a〉
    Keywords: Astronauts/trends ; Humans ; Public-Private Sector Partnerships/trends ; Space Flight/economics/organization & administration/*trends ; United States ; United States National Aeronautics and Space ; Administration/economics/organization & administration/*trends
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  • 48
    Publication Date: 2011-10-07
    Description: Maize smut caused by the fungus Ustilago maydis is a widespread disease characterized by the development of large plant tumours. U. maydis is a biotrophic pathogen that requires living plant tissue for its development and establishes an intimate interaction zone between fungal hyphae and the plant plasma membrane. U. maydis actively suppresses plant defence responses by secreted protein effectors. Its effector repertoire comprises at least 386 genes mostly encoding proteins of unknown function and expressed exclusively during the biotrophic stage. The U. maydis secretome also contains about 150 proteins with probable roles in fungal nutrition, fungal cell wall modification and host penetration as well as proteins unlikely to act in the fungal-host interface like a chorismate mutase. Chorismate mutases are key enzymes of the shikimate pathway and catalyse the conversion of chorismate to prephenate, the precursor for tyrosine and phenylalanine synthesis. Root-knot nematodes inject a secreted chorismate mutase into plant cells likely to affect development. Here we show that the chorismate mutase Cmu1 secreted by U. maydis is a virulence factor. The enzyme is taken up by plant cells, can spread to neighbouring cells and changes the metabolic status of these cells through metabolic priming. Secreted chorismate mutases are found in many plant-associated microbes and might serve as general tools for host manipulation.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Djamei, Armin -- Schipper, Kerstin -- Rabe, Franziska -- Ghosh, Anupama -- Vincon, Volker -- Kahnt, Jorg -- Osorio, Sonia -- Tohge, Takayuki -- Fernie, Alisdair R -- Feussner, Ivo -- Feussner, Kirstin -- Meinicke, Peter -- Stierhof, York-Dieter -- Schwarz, Heinz -- Macek, Boris -- Mann, Matthias -- Kahmann, Regine -- England -- Nature. 2011 Oct 5;478(7369):395-8. doi: 10.1038/nature10454.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Max Planck Institute for Terrestrial Microbiology, Karl-von-Frisch-Strasse 10, D-35043 Marburg, Germany.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21976020" target="_blank"〉PubMed〈/a〉
    Keywords: Chorismate Mutase/*metabolism ; Cytoplasm/enzymology ; Gene Expression Regulation, Plant ; Genetic Complementation Test ; Host-Pathogen Interactions ; Metabolome ; Models, Biological ; Plant Proteins/metabolism ; Plastids/enzymology ; Protein Multimerization ; Saccharomyces cerevisiae/genetics ; Salicylic Acid/metabolism ; Two-Hybrid System Techniques ; Ustilago/*enzymology/*pathogenicity ; Virulence Factors/genetics/*metabolism ; Zea mays/*metabolism/*microbiology
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  • 49
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    Nature Publishing Group (NPG)
    Publication Date: 2011-08-19
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Hayden, Erika Check -- England -- Nature. 2011 Aug 16;476(7360):260-1. doi: 10.1038/476260a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21850077" target="_blank"〉PubMed〈/a〉
    Keywords: Chemoprevention/*adverse effects/*psychology ; Clinical Trials as Topic ; Deoxycytidine/analogs & derivatives/pharmacology/supply & ; distribution/therapeutic use ; Drug Combinations ; Emtricitabine, Tenofovir Disoproxil Fumarate Drug Combination ; Female ; HIV Infections/economics/*prevention & control/*psychology ; Health ; Humans ; Male ; Organophosphorus Compounds/pharmacology/supply & distribution/therapeutic use ; United States ; United States Food and Drug Administration ; Unsafe Sex/*drug effects/*psychology/statistics & numerical data
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  • 50
    Publication Date: 2011-07-08
    Description: Swi2/Snf2-type ATPases regulate genome-associated processes such as transcription, replication and repair by catalysing the disruption, assembly or remodelling of nucleosomes or other protein-DNA complexes. It has been suggested that ATP-driven motor activity along DNA disrupts target protein-DNA interactions in the remodelling reaction. However, the complex and highly specific remodelling reactions are poorly understood, mostly because of a lack of high-resolution structural information about how remodellers bind to their substrate proteins. Mot1 (modifier of transcription 1 in Saccharomyces cerevisiae, denoted BTAF1 in humans) is a Swi2/Snf2 enzyme that specifically displaces the TATA box binding protein (TBP) from the promoter DNA and regulates transcription globally by generating a highly dynamic TBP pool in the cell. As a Swi2/Snf2 enzyme that functions as a single polypeptide and interacts with a relatively simple substrate, Mot1 offers an ideal system from which to gain a better understanding of this important enzyme family. To reveal how Mot1 specifically disrupts TBP-DNA complexes, we combined crystal and electron microscopy structures of Mot1-TBP from Encephalitozoon cuniculi with biochemical studies. Here we show that Mot1 wraps around TBP and seems to act like a bottle opener: a spring-like array of 16 HEAT (huntingtin, elongation factor 3, protein phosphatase 2A and lipid kinase TOR) repeats grips the DNA-distal side of TBP via loop insertions, and the Swi2/Snf2 domain binds to upstream DNA, positioned to weaken the TBP-DNA interaction by DNA translocation. A 'latch' subsequently blocks the DNA-binding groove of TBP, acting as a chaperone to prevent DNA re-association and ensure efficient promoter clearance. This work shows how a remodelling enzyme can combine both motor and chaperone activities to achieve functional specificity using a conserved Swi2/Snf2 translocase.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3276066/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3276066/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Wollmann, Petra -- Cui, Sheng -- Viswanathan, Ramya -- Berninghausen, Otto -- Wells, Melissa N -- Moldt, Manuela -- Witte, Gregor -- Butryn, Agata -- Wendler, Petra -- Beckmann, Roland -- Auble, David T -- Hopfner, Karl-Peter -- GM55763/GM/NIGMS NIH HHS/ -- R01 GM055763/GM/NIGMS NIH HHS/ -- R01 GM055763-13/GM/NIGMS NIH HHS/ -- England -- Nature. 2011 Jul 6;475(7356):403-7. doi: 10.1038/nature10215.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biochemistry, Ludwig-Maximilians University, Feodor-Lynen-Strasse 25, 81377 Munich, Germany.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21734658" target="_blank"〉PubMed〈/a〉
    Keywords: Binding Sites ; Crystallization ; Crystallography, X-Ray ; DNA/chemistry/genetics/metabolism/ultrastructure ; Encephalitozoon cuniculi/*chemistry ; Fungal Proteins/*chemistry/*metabolism/ultrastructure ; Microscopy, Electron ; Models, Biological ; Models, Molecular ; Promoter Regions, Genetic/genetics ; Protein Conformation ; Protein Structure, Tertiary ; Structure-Activity Relationship ; Substrate Specificity ; TATA-Box Binding Protein/*chemistry/*metabolism/ultrastructure ; Transcription Factor TFIIB/chemistry/metabolism
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    Nature Publishing Group (NPG)
    Publication Date: 2011-07-16
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Eisenstein, Michael -- England -- Nature. 2011 Jul 13;475(7355):S20-2. doi: 10.1038/475S20a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21760580" target="_blank"〉PubMed〈/a〉
    Keywords: ATP-Binding Cassette Transporters/genetics ; Age of Onset ; Alzheimer Disease/*genetics/immunology/metabolism/pathology ; Amyloid beta-Peptides/chemistry/genetics/metabolism ; Apolipoprotein E4/*genetics/immunology/metabolism ; Biological Transport ; Cholesterol/metabolism ; Clusterin/genetics/metabolism ; DNA, Mitochondrial/genetics ; Exons/genetics ; *Genetic Predisposition to Disease ; Genome-Wide Association Study ; Humans ; LDL-Receptor Related Proteins/genetics ; Lipid Metabolism/genetics ; Membrane Transport Proteins/genetics ; Meta-Analysis as Topic ; Models, Biological ; Monomeric Clathrin Assembly Proteins/genetics/metabolism ; Polymorphism, Single Nucleotide/genetics ; Receptors, Complement/genetics/immunology
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  • 52
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    Nature Publishing Group (NPG)
    Publication Date: 2011-08-05
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Hand, Eric -- England -- Nature. 2011 Aug 1;476(7358):13-4. doi: 10.1038/476013a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21814249" target="_blank"〉PubMed〈/a〉
    Keywords: Extraterrestrial Environment/chemistry ; *Jupiter ; Oxygen/analysis ; Space Flight ; Spacecraft ; United States ; United States National Aeronautics and Space Administration ; Water/analysis/chemistry
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  • 53
    Publication Date: 2011-02-26
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Wickner, Reed B -- England -- Nature. 2011 Feb 24;470(7335):470-1. doi: 10.1038/470470a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21350474" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Biological Assay ; Gene Expression ; Humans ; Mice ; Models, Biological ; PrPC Proteins/analysis/biosynthesis/genetics/metabolism ; PrPSc Proteins/biosynthesis/*metabolism/*pathogenicity/toxicity ; Prion Diseases/*metabolism/pathology/physiopathology/*transmission ; Survival Rate ; Time Factors ; Toxicity Tests
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  • 54
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    Nature Publishing Group (NPG)
    Publication Date: 2011-07-29
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Hand, Eric -- England -- Nature. 2011 Jul 27;475(7357):433. doi: 10.1038/475433a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21796175" target="_blank"〉PubMed〈/a〉
    Keywords: Exobiology ; *Mars ; *Space Flight ; United States ; *United States National Aeronautics and Space Administration
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  • 55
    Publication Date: 2011-03-25
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Sporn, Michael B -- England -- Nature. 2011 Mar 24;471(7339):S10-1. doi: 10.1038/471S10a.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Dartmouth Medical School, Hanover, New Hampshire, USA. michael.b.sporn@dartmouth.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21430710" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Antineoplastic Combined Chemotherapy Protocols/economics/pharmacology/therapeutic ; use ; Clinical Trials as Topic/legislation & jurisprudence/standards ; Cooperative Behavior ; Disease Progression ; Female ; Humans ; Male ; Neoplasms/drug therapy/epidemiology/pathology/*prevention & control ; Precision Medicine/trends ; Risk ; Time Factors ; Tumor Microenvironment/drug effects ; United States ; United States Food and Drug Administration/legislation & jurisprudence
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    Nature Publishing Group (NPG)
    Publication Date: 2011-08-19
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Reich, Eugenie Samuel -- England -- Nature. 2011 Aug 16;476(7360):262. doi: 10.1038/476262a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21850078" target="_blank"〉PubMed〈/a〉
    Keywords: *Ethics, Professional ; Humans ; *Policy Making ; Science/*standards ; United States ; United States Environmental Protection Agency/ethics ; United States Government Agencies/*ethics/standards
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    Nature Publishing Group (NPG)
    Publication Date: 2011-06-24
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Kysar, Douglas -- England -- Nature. 2011 Jun 21;474(7352):421. doi: 10.1038/474421a.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Yale Law School, New Haven, Connecticut, USA. douglas.kysar@yale.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21697906" target="_blank"〉PubMed〈/a〉
    Keywords: Carbon Dioxide/analysis ; Connecticut ; Greenhouse Effect/legislation & jurisprudence ; Power Plants/*legislation & jurisprudence ; United States ; United States Environmental Protection Agency/*legislation & jurisprudence
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    Nature Publishing Group (NPG)
    Publication Date: 2011-03-18
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉England -- Nature. 2011 Mar 17;471(7338):265-6. doi: 10.1038/471265b.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21412287" target="_blank"〉PubMed〈/a〉
    Keywords: Conservation of Energy Resources/legislation & jurisprudence ; *Federal Government ; Global Warming/*legislation & jurisprudence/prevention & control/statistics & ; numerical data ; United States
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  • 59
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    Nature Publishing Group (NPG)
    Publication Date: 2011-04-15
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Miller, Henry I -- England -- Nature. 2011 Apr 14;472(7342):169. doi: 10.1038/472169a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21490657" target="_blank"〉PubMed〈/a〉
    Keywords: Drug Approval/legislation & jurisprudence/*methods/organization & administration ; Drug Discovery/economics/legislation & jurisprudence/methods ; Drug Industry/legislation & jurisprudence ; Humans ; National Institutes of Health (U.S.)/legislation & jurisprudence/*organization & ; administration ; Time Factors ; Translational Medical Research ; United States ; United States Food and Drug Administration/legislation & ; jurisprudence/*organization & administration
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  • 60
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    Nature Publishing Group (NPG)
    Publication Date: 2011-12-24
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Lake, James A -- England -- Nature. 2011 Dec 21;480(7378):458. doi: 10.1038/480458a.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Molecular, Cell and Developmental Biology, University of California, Los Angeles, California 90095, USA. lake@mbi.ucla.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22193092" target="_blank"〉PubMed〈/a〉
    Keywords: *Biological Evolution ; Biology/history ; History, 20th Century ; History, 21st Century ; *Symbiosis ; United States
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    Nature Publishing Group (NPG)
    Publication Date: 2011-03-04
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉England -- Nature. 2011 Mar 3;471(7336):5-6. doi: 10.1038/471005b.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21368779" target="_blank"〉PubMed〈/a〉
    Keywords: African Americans/education/statistics & numerical data ; Humans ; Indians, North American/education/statistics & numerical data ; Minority Groups/education/*statistics & numerical data ; Public Relations ; Research Personnel/education/*statistics & numerical data ; Science/economics/education/*manpower ; United States
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  • 62
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    Nature Publishing Group (NPG)
    Publication Date: 2011-03-04
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉England -- Nature. 2011 Mar 3;471(7336):5. doi: 10.1038/471005a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21368778" target="_blank"〉PubMed〈/a〉
    Keywords: Adolescent ; Adult ; Aged ; Aging/genetics/physiology ; Child ; Child Development/physiology ; Child, Preschool ; *Cohort Studies ; Great Britain ; *Health Surveys/economics/history/trends ; History, 20th Century ; History, 21st Century ; Humans ; Infant ; Infant, Newborn ; Middle Aged ; Socioeconomic Factors ; Time Factors ; United States ; Young Adult
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  • 63
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    Nature Publishing Group (NPG)
    Publication Date: 2011-01-21
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Robinson, Carol V -- England -- Nature. 2011 Jan 20;469(7330):300. doi: 10.1038/469300a.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉University of Oxford Physical and Theoretical Chemistry Laboratory, Oxford OX1 3QZ, UK. carol.robinson@chem.ox.ac.uk〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21248828" target="_blank"〉PubMed〈/a〉
    Keywords: Chemistry/*history ; History, 20th Century ; History, 21st Century ; Military Science ; Nobel Prize ; Patents as Topic ; Spectrometry, Mass, Electrospray Ionization/*history ; United States
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  • 64
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    Nature Publishing Group (NPG)
    Publication Date: 2011-02-19
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Hayden, Erika Check -- England -- Nature. 2011 Feb 17;470(7334):318-9. doi: 10.1038/470318a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21331016" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Biomedical Research/economics/*legislation & jurisprudence ; *Disease Models, Animal ; Female ; Humans ; Internationality ; Licensure/*legislation & jurisprudence ; Methyl-CpG-Binding Protein 2/genetics/immunology ; Mice ; Models, Immunological ; National Institutes of Health (U.S.) ; *Rare Diseases ; *Rett Syndrome/genetics/immunology/therapy ; Time Factors ; United States
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  • 65
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    Nature Publishing Group (NPG)
    Publication Date: 2011-01-14
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Stevens, Ashley J -- England -- Nature. 2011 Jan 13;469(7329):162. doi: 10.1038/469162b.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21228860" target="_blank"〉PubMed〈/a〉
    Keywords: *Federal Government ; Great Britain ; Licensure/economics/*legislation & jurisprudence ; Patents as Topic/*legislation & jurisprudence ; *Policy ; Research Support as Topic/*legislation & jurisprudence ; United States ; Universities/*economics
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  • 66
    Publication Date: 2011-01-05
    Description: During mitosis, adherent animal cells undergo a drastic shape change, from essentially flat to round. Mitotic cell rounding is thought to facilitate organization within the mitotic cell and be necessary for the geometric requirements of division. However, the forces that drive this shape change remain poorly understood in the presence of external impediments, such as a tissue environment. Here we use cantilevers to track cell rounding force and volume. We show that cells have an outward rounding force, which increases as cells enter mitosis. We find that this mitotic rounding force depends both on the actomyosin cytoskeleton and the cells' ability to regulate osmolarity. The rounding force itself is generated by an osmotic pressure. However, the actomyosin cortex is required to maintain this rounding force against external impediments. Instantaneous disruption of the actomyosin cortex leads to volume increase, and stimulation of actomyosin contraction leads to volume decrease. These results show that in cells, osmotic pressure is balanced by inwardly directed actomyosin cortex contraction. Thus, by locally modulating actomyosin-cortex-dependent surface tension and globally regulating osmotic pressure, cells can control their volume, shape and mechanical properties.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Stewart, Martin P -- Helenius, Jonne -- Toyoda, Yusuke -- Ramanathan, Subramanian P -- Muller, Daniel J -- Hyman, Anthony A -- England -- Nature. 2011 Jan 13;469(7329):226-30. doi: 10.1038/nature09642. Epub 2011 Jan 2.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉ETH Zurich, Department of Biosystems Science and Engineering, CH-4058 Basel, Switzerland.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21196934" target="_blank"〉PubMed〈/a〉
    Keywords: Actomyosin/*metabolism ; Animals ; Cell Shape/drug effects/*physiology ; Cell Size/drug effects ; Cytochalasin D/pharmacology ; Cytoskeleton/drug effects/*metabolism ; HeLa Cells ; Humans ; Hydrostatic Pressure ; Microscopy, Atomic Force ; *Mitosis ; Models, Biological ; Osmolar Concentration ; Osmotic Pressure ; Prophase
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  • 67
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    Nature Publishing Group (NPG)
    Publication Date: 2011-06-10
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Reichmann, James P -- England -- Nature. 2011 Jun 8;474(7350):161. doi: 10.1038/474161c.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21654788" target="_blank"〉PubMed〈/a〉
    Keywords: Clinical Trials as Topic ; *Drug Approval ; Female ; Humans ; *National Institutes of Health (U.S.) ; Orphan Drug Production/legislation & jurisprudence ; Pregnancy ; Premature Birth/prevention & control ; Time Factors ; United States ; *United States Food and Drug Administration/legislation & jurisprudence
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  • 68
    Publication Date: 2011-10-01
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Ledford, Heidi -- England -- Nature. 2011 Sep 28;477(7366):526-8. doi: 10.1038/477526a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21956311" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Clinical Trials as Topic/economics/*methods/*trends ; Database Management Systems ; Disease Models, Animal ; Drug Evaluation, Preclinical/methods ; Female ; Humans ; Male ; Mice ; Multicenter Studies as Topic/methods ; Precision Medicine/economics/methods/trends ; Translational Medical Research/economics/methods/trends ; United States ; United States Food and Drug Administration/legislation & jurisprudence
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  • 69
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    Nature Publishing Group (NPG)
    Publication Date: 2011-09-17
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Suresh, Subra -- England -- Nature. 2011 Sep 12;477(7364):263. doi: 10.1038/477263a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21921894" target="_blank"〉PubMed〈/a〉
    Keywords: Advisory Committees ; Budgets ; Financing, Organized/organization & administration ; Patents as Topic ; Research Personnel/economics/standards ; Research Support as Topic/*economics/*organization & administration ; Science/*economics/*standards ; Technology Transfer ; United States ; *United States Government Agencies/economics/organization & administration
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  • 70
    Publication Date: 2011-04-09
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Bushnell, Dennis -- Garneau, Marc -- Logsdon, John M -- Sagdeev, Roald -- Lu, Ed -- Mountain, Matt -- Stephenson, Neal -- England -- Nature. 2011 Apr 7;472(7341):27-9. doi: 10.1038/472027a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21475173" target="_blank"〉PubMed〈/a〉
    Keywords: Astronauts/trends ; Mars ; Minor Planets ; Research/economics/trends ; Robotics/economics/trends ; Space Flight/economics/trends ; Spacecraft/economics ; United States ; United States National Aeronautics and Space Administration/economics/*trends
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  • 71
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    Nature Publishing Group (NPG)
    Publication Date: 2011-04-09
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Hector, Andy -- England -- Nature. 2011 Apr 7;472(7341):45-6. doi: 10.1038/472045a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21475190" target="_blank"〉PubMed〈/a〉
    Keywords: *Biodiversity ; Biofilms/growth & development ; Biomass ; Chlorophyta/growth & development/*physiology ; Diatoms/growth & development/*physiology ; Models, Biological ; Nitrogen/analysis/metabolism ; Population Density ; Rivers/*chemistry/*microbiology
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  • 72
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    Nature Publishing Group (NPG)
    Publication Date: 2011-07-22
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Ledford, Heidi -- England -- Nature. 2011 Jul 20;475(7356):274-5. doi: 10.1038/475274a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21776051" target="_blank"〉PubMed〈/a〉
    Keywords: Biolistics ; Genetic Engineering/legislation & jurisprudence ; Glycine/analogs & derivatives/pharmacology ; *Government Regulation ; Plants, Genetically Modified/drug effects/*genetics/virology ; Poaceae/drug effects/*genetics ; Rhizobium/genetics/physiology ; United States ; United States Department of Agriculture/*legislation & jurisprudence
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  • 73
    Publication Date: 2011-04-02
    Description: Arising from W. Wiltschko et al. 419, 467-470 (2002); Wiltschko et al. replyThe magnetic compass of migratory birds is embedded in the visual system and it has been reported by Wiltschko et al. that European Robins, Erithacus rubecula, cannot show magnetic compass orientation using their left eye only. This has led to the notion that the magnetic compass should be located only in the right eye of birds. However, a complete right lateralization of the magnetic compass would be very surprising, and functional neuroanatomical data have questioned this notion. Here we show that the results of Wiltschko et al. could not be independently confirmed using double-blind protocols. European Robins can perform magnetic compass orientation with both eyes open, with the left eye open only, and with the right eye open only. No clear lateralization is observed.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Hein, Christine Maira -- Engels, Svenja -- Kishkinev, Dmitry -- Mouritsen, Henrik -- England -- Nature. 2011 Mar 31;471(7340):E11-2; discussion E12-3. doi: 10.1038/nature09875.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉AG Neurosensorik/Animal Navigation, IBU, University of Oldenburg, D-26111 Oldenburg, Germany.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21455128" target="_blank"〉PubMed〈/a〉
    Keywords: Animal Migration/*physiology/radiation effects ; Animals ; *Eye/radiation effects ; Functional Laterality/physiology ; *Magnetics ; Models, Biological ; *Ocular Physiological Phenomena/radiation effects ; Orientation/*physiology/radiation effects ; Photic Stimulation ; Reproducibility of Results ; Seasons ; Songbirds/anatomy & histology/*physiology
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  • 74
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    Nature Publishing Group (NPG)
    Publication Date: 2011-10-28
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Romm, Joseph -- England -- Nature. 2011 Oct 26;478(7370):450-1. doi: 10.1038/478450a.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Center for American Progress Action Fund, Washington DC, USA. jromm@americanprogress.org〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22031419" target="_blank"〉PubMed〈/a〉
    Keywords: *Desert Climate/adverse effects ; Desiccation ; Disasters/statistics & numerical data ; Droughts/*statistics & numerical data ; Environmental Policy ; Fires ; Food Supply/statistics & numerical data ; Global Warming/*statistics & numerical data ; Hot Temperature ; Policy Making ; Rain ; Trees/growth & development ; United States ; Volatilization ; Water Supply/statistics & numerical data
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  • 75
    Publication Date: 2011-05-20
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Hayden, Erika Check -- England -- Nature. 2011 May 19;473(7347):272-4. doi: 10.1038/473272a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21593837" target="_blank"〉PubMed〈/a〉
    Keywords: Adult Stem Cells/cytology/metabolism ; Animals ; Cellular Reprogramming/genetics ; Epistasis, Genetic/genetics ; Humans ; Induced Pluripotent Stem Cells/*cytology/metabolism ; Insulin-Secreting Cells/cytology/transplantation ; Mice ; Models, Biological ; Mutation ; Precision Medicine/trends ; Regenerative Medicine/*trends ; *Stem Cell Research
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  • 76
    Publication Date: 2011-12-20
    Description: Ion-translocating rotary ATPases serve either as ATP synthases, using energy from a transmembrane ion motive force to create the cell's supply of ATP, or as transmembrane ion pumps that are powered by ATP hydrolysis. The members of this family of enzymes each contain two rotary motors: one that couples ion translocation to rotation and one that couples rotation to ATP synthesis or hydrolysis. During ATP synthesis, ion translocation through the membrane-bound region of the complex causes rotation of a central rotor that drives conformational changes and ATP synthesis in the catalytic region of the complex. There are no structural models available for the intact membrane region of any ion-translocating rotary ATPase. Here we present a 9.7 A resolution map of the H(+)-driven ATP synthase from Thermus thermophilus obtained by electron cryomicroscopy of single particles in ice. The 600-kilodalton complex has an overall subunit composition of A(3)B(3)CDE(2)FG(2)IL(12). The membrane-bound motor consists of a ring of L subunits and the carboxy-terminal region of subunit I, which are equivalent to the c and a subunits of most other rotary ATPases, respectively. The map shows that the ring contains 12 L subunits and that the I subunit has eight transmembrane helices. The L(12) ring and I subunit have a surprisingly small contact area in the middle of the membrane, with helices from the I subunit making contacts with two different L subunits. The transmembrane helices of subunit I form bundles that could serve as half-channels across the membrane, with the first half-channel conducting protons from the periplasm to the L(12) ring and the second half-channel conducting protons from the L(12) ring to the cytoplasm. This structure therefore suggests the mechanism by which a transmembrane proton motive force is converted to rotation in rotary ATPases.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Lau, Wilson C Y -- Rubinstein, John L -- MOP 81294/Canadian Institutes of Health Research/Canada -- England -- Nature. 2011 Dec 18;481(7380):214-8. doi: 10.1038/nature10699.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Molecular Structure and Function Program, The Hospital for Sick Children Research Institute, 555 University Avenue, Toronto, Ontario M5G 1X8, Canada.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22178924" target="_blank"〉PubMed〈/a〉
    Keywords: Cell Membrane/metabolism ; *Cryoelectron Microscopy ; Ice ; Models, Biological ; Models, Molecular ; Protein Subunits/chemistry/metabolism ; Proton-Motive Force ; Proton-Translocating ATPases/*chemistry/metabolism/*ultrastructure ; *Protons ; Rotation ; Structure-Activity Relationship ; Thermus thermophilus/*enzymology
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  • 77
    Publication Date: 2011-01-25
    Description: Common fragile sites have long been identified by cytogeneticists as chromosomal regions prone to breakage upon replication stress. They are increasingly recognized to be preferential targets for oncogene-induced DNA damage in pre-neoplastic lesions and hotspots for chromosomal rearrangements in various cancers. Common fragile site instability was attributed to the fact that they contain sequences prone to form secondary structures that may impair replication fork movement, possibly leading to fork collapse resulting in DNA breaks. Here we show, in contrast to this view, that the fragility of FRA3B--the most active common fragile site in human lymphocytes--does not rely on fork slowing or stalling but on a paucity of initiation events. Indeed, in lymphoblastoid cells, but not in fibroblasts, initiation events are excluded from a FRA3B core extending approximately 700 kilobases, which forces forks coming from flanking regions to cover long distances in order to complete replication. We also show that origins of the flanking regions fire in mid-S phase, leaving the site incompletely replicated upon fork slowing. Notably, FRA3B instability is specific to cells showing this particular initiation pattern. The fact that both origin setting and replication timing are highly plastic in mammalian cells explains the tissue specificity of common fragile site instability we observed. Thus, we propose that common fragile sites correspond to the latest initiation-poor regions to complete replication in a given cell type. For historical reasons, common fragile sites have been essentially mapped in lymphocytes. Therefore, common fragile site contribution to chromosomal rearrangements in tumours should be reassessed after mapping fragile sites in the cell type from which each tumour originates.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Letessier, Anne -- Millot, Gael A -- Koundrioukoff, Stephane -- Lachages, Anne-Marie -- Vogt, Nicolas -- Hansen, R Scott -- Malfoy, Bernard -- Brison, Olivier -- Debatisse, Michelle -- England -- Nature. 2011 Feb 3;470(7332):120-3. doi: 10.1038/nature09745. Epub 2011 Jan 23.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Institut Curie, Centre de Recherche, 26 rue d'Ulm, 75248 Paris, France.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21258320" target="_blank"〉PubMed〈/a〉
    Keywords: Acid Anhydride Hydrolases/*genetics ; Cell Line ; Chromosome Breakage ; Chromosome Fragile Sites/*genetics ; Chromosome Fragility/genetics/*physiology ; DNA Replication/genetics/*physiology ; Fibroblasts ; Genes, Tumor Suppressor ; Genetic Loci/genetics ; Humans ; Lymphocytes/metabolism ; Models, Biological ; Neoplasm Proteins/*genetics ; Organ Specificity ; Replication Origin/*genetics
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  • 78
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    Nature Publishing Group (NPG)
    Publication Date: 2011-05-06
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Altman, Russ -- England -- Nature. 2011 May 5;473(7345):31. doi: 10.1038/473031b.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21544133" target="_blank"〉PubMed〈/a〉
    Keywords: Humans ; National Institutes of Health (U.S.)/*economics/*organization & administration ; United States
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  • 79
    Publication Date: 2011-03-25
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Samuel Reich, Eugenie -- England -- Nature. 2011 Mar 24;471(7339):423. doi: 10.1038/471423a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21430747" target="_blank"〉PubMed〈/a〉
    Keywords: Conflict of Interest/*legislation & jurisprudence ; *Federal Government ; Lobbying ; Research Personnel/*ethics ; Societies, Scientific/*organization & administration ; United States
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  • 80
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    Nature Publishing Group (NPG)
    Publication Date: 2011-07-15
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Carmichael, Mary -- England -- Nature. 2011 Jul 13;475(7355):156-8. doi: 10.1038/475156a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21753828" target="_blank"〉PubMed〈/a〉
    Keywords: *Genetic Privacy/ethics/legislation & jurisprudence/standards ; Humans ; Infant, Newborn ; *Neonatal Screening/ethics/standards ; Parental Consent/*ethics/statistics & numerical data ; Translational Medical Research/standards/trends ; United States
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  • 81
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    Nature Publishing Group (NPG)
    Publication Date: 2011-03-11
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Samuel Reich, Eugenie -- England -- Nature. 2011 Mar 10;471(7337):144-5. doi: 10.1038/471144a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21390099" target="_blank"〉PubMed〈/a〉
    Keywords: Budgets/*legislation & jurisprudence ; *Federal Government ; Research/*economics ; Research Personnel/*economics ; Research Support as Topic/*economics/*legislation & jurisprudence/trends ; Uncertainty ; United States
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  • 82
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    Nature Publishing Group (NPG)
    Publication Date: 2011-03-04
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Arendt, Detlev -- England -- Nature. 2011 Mar 3;471(7336):44-5. doi: 10.1038/471044a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21368817" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Annelida/anatomy & histology/chemistry/*classification ; History, 19th Century ; History, 20th Century ; Models, Biological ; *Phylogeny
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  • 83
    Publication Date: 2011-08-13
    Description: Biodiversity is rapidly declining worldwide, and there is consensus that this can decrease ecosystem functioning and services. It remains unclear, though, whether few or many of the species in an ecosystem are needed to sustain the provisioning of ecosystem services. It has been hypothesized that most species would promote ecosystem services if many times, places, functions and environmental changes were considered; however, no previous study has considered all of these factors together. Here we show that 84% of the 147 grassland plant species studied in 17 biodiversity experiments promoted ecosystem functioning at least once. Different species promoted ecosystem functioning during different years, at different places, for different functions and under different environmental change scenarios. Furthermore, the species needed to provide one function during multiple years were not the same as those needed to provide multiple functions within one year. Our results indicate that even more species will be needed to maintain ecosystem functioning and services than previously suggested by studies that have either (1) considered only the number of species needed to promote one function under one set of environmental conditions, or (2) separately considered the importance of biodiversity for providing ecosystem functioning across multiple years, places, functions or environmental change scenarios. Therefore, although species may appear functionally redundant when one function is considered under one set of environmental conditions, many species are needed to maintain multiple functions at multiple times and places in a changing world.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Isbell, Forest -- Calcagno, Vincent -- Hector, Andy -- Connolly, John -- Harpole, W Stanley -- Reich, Peter B -- Scherer-Lorenzen, Michael -- Schmid, Bernhard -- Tilman, David -- van Ruijven, Jasper -- Weigelt, Alexandra -- Wilsey, Brian J -- Zavaleta, Erika S -- Loreau, Michel -- England -- Nature. 2011 Aug 10;477(7363):199-202. doi: 10.1038/nature10282.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biology, McGill University, Montreal, Quebec, H3A 1B1, Canada. forest.isbell@gmail.com〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21832994" target="_blank"〉PubMed〈/a〉
    Keywords: *Biodiversity ; Ecology/methods ; *Ecosystem ; Extinction, Biological ; Models, Biological ; Plant Development ; *Plant Physiological Phenomena ; *Plants/classification ; Poaceae ; Species Specificity
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  • 84
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    Nature Publishing Group (NPG)
    Publication Date: 2011-01-14
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Tollefson, Jeff -- England -- Nature. 2011 Jan 13;469(7329):144. doi: 10.1038/469144a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21228846" target="_blank"〉PubMed〈/a〉
    Keywords: Acclimatization/genetics/*physiology ; Crops, Agricultural/economics/genetics/growth & development/*physiology ; Dehydration/genetics ; *Droughts ; Hybridization, Genetic ; Seeds/growth & development ; United States ; Water/analysis ; Zea mays/genetics/growth & development/*physiology
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  • 85
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    Nature Publishing Group (NPG)
    Publication Date: 2011-12-02
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Lifschitz, Vladimir -- England -- Nature. 2011 Nov 30;480(7375):40. doi: 10.1038/480040a.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉University of Texas at Austin, Texas 78712, USA. vl@cs.utexas.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22129718" target="_blank"〉PubMed〈/a〉
    Keywords: *Artificial Intelligence ; History, 20th Century ; Mathematical Computing ; Mathematics/*history ; Software ; United States
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  • 86
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    Nature Publishing Group (NPG)
    Publication Date: 2011-10-28
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Nussenzweig, Michel C -- Mellman, Ira -- England -- Nature. 2011 Oct 26;478(7370):460. doi: 10.1038/478460a.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Rockefeller University, USA. nussen@mail.rockefeller.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22031432" target="_blank"〉PubMed〈/a〉
    Keywords: Allergy and Immunology/*history ; Animals ; Canada ; Cancer Vaccines/immunology ; Cell Biology/history ; Dendritic Cells/cytology/*immunology ; History, 20th Century ; History, 21st Century ; Humans ; Nobel Prize ; Translational Medical Research ; United States
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  • 87
    Publication Date: 2011-01-07
    Description: Until recently, the study of negative and antagonistic interactions (for example, competition and predation) has dominated our understanding of community structure, maintenance and assembly. Nevertheless, a recent theoretical model suggests that positive interactions (for example, mutualisms) may counterbalance competition, facilitating long-term coexistence even among ecologically undifferentiated species. Mullerian mimics are mutualists that share the costs of predator education and are therefore ideally suited for the investigation of positive and negative interactions in community dynamics. The sole empirical test of this model in a Mullerian mimetic community supports the prediction that positive interactions outweigh the negative effects of spatial overlap (without quantifying resource acquisition). Understanding the role of trophic niche partitioning in facilitating the evolution and stability of Mullerian mimetic communities is now of critical importance, but has yet to be formally investigated. Here we show that resource partitioning and phylogeny determine community structure and outweigh the positive effects of Mullerian mimicry in a species-rich group of neotropical catfishes. From multiple, independent reproductively isolated allopatric communities displaying convergently evolved colour patterns, 92% consist of species that do not compete for resources. Significant differences in phylogenetically conserved traits (snout morphology and body size) were consistently linked to trait-specific resource acquisition. Thus, we report the first evidence, to our knowledge, that competition for trophic resources and phylogeny are pivotal factors in the stable evolution of Mullerian mimicry rings. More generally, our work demonstrates that competition for resources is likely to have a dominant role in the structuring of communities that are simultaneously subject to the effects of both positive and negative interactions.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Alexandrou, Markos A -- Oliveira, Claudio -- Maillard, Marjorie -- McGill, Rona A R -- Newton, Jason -- Creer, Simon -- Taylor, Martin I -- England -- Nature. 2011 Jan 6;469(7328):84-8. doi: 10.1038/nature09660.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Environment Centre Wales, Molecular Ecology and Fisheries Genetics Laboratory, School of Biological Sciences, College of Natural Sciences, Bangor University, Bangor LL57 2UW, UK.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21209663" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Bayes Theorem ; Body Size/physiology ; Catfishes/anatomy & histology/classification/genetics/*physiology ; Competitive Behavior/*physiology ; *Ecosystem ; Food Chain ; Likelihood Functions ; Models, Biological ; Molecular Mimicry/*physiology ; *Phylogeny ; Pigmentation/physiology ; Predatory Behavior/physiology ; South America
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  • 88
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    Nature Publishing Group (NPG)
    Publication Date: 2011-09-03
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Germain, Ronald N -- Paul, William E -- England -- Nature. 2011 Aug 31;477(7362):34. doi: 10.1038/477034a.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland 20892, USA. rgermain@nih.gov〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21886149" target="_blank"〉PubMed〈/a〉
    Keywords: *Allergy and Immunology ; History, 20th Century ; History, 21st Century ; United States ; Venezuela
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  • 89
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    Nature Publishing Group (NPG)
    Publication Date: 2011-03-11
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Sarewitz, Daniel -- England -- Nature. 2011 Mar 10;471(7337):137. doi: 10.1038/471137a.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Consortium for Science, Policy and Outcomes, Arizona State University, USA. dsarewitz@gmail.com〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21390086" target="_blank"〉PubMed〈/a〉
    Keywords: *Federal Government ; History, 20th Century ; History, 21st Century ; Military Science/economics/history ; Policy Making ; Public-Private Sector Partnerships/economics ; Science/*economics/*organization & administration ; Technology/*economics/*organization & administration ; United States ; United States Department of Defense/economics/history ; United States National Aeronautics and Space Administration/economics
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  • 90
    Publication Date: 2011-04-09
    Description: Excessive nutrient loading of water bodies is a leading cause of water pollution worldwide, and controlling nutrient levels in watersheds is a primary objective of most environmental policy. Over the past two decades, much research has shown that ecosystems with more species are more efficient at removing nutrients from soil and water than are ecosystems with fewer species. This has led some to suggest that conservation of biodiversity might be a useful tool for managing nutrient uptake and storage, but this suggestion has been controversial, in part because the specific biological mechanisms by which species diversity influences nutrient uptake have not been identified. Here I use a model system of stream biofilms to show that niche partitioning among species of algae can increase the uptake and storage of nitrate, a nutrient pollutant of global concern. I manipulated the number of species of algae growing in the biofilms of 150 stream mesocosms that had been set up to mimic the variety of flow habitats and disturbance regimes that are typical of natural streams. Nitrogen uptake rates, as measured by using (15)N-labelled nitrate, increased linearly with species richness and were driven by niche differences among species. As different forms of algae came to dominate each unique habitat in a stream, the more diverse communities achieved a higher biomass and greater (15)N uptake. When these niche opportunities were experimentally removed by making all of the habitats in a stream uniform, diversity did not influence nitrogen uptake, and biofilms collapsed to a single dominant species. These results provide direct evidence that communities with more species take greater advantage of the niche opportunities in an environment, and this allows diverse systems to capture a greater proportion of biologically available resources such as nitrogen. One implication is that biodiversity may help to buffer natural ecosystems against the ecological impacts of nutrient pollution.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Cardinale, Bradley J -- England -- Nature. 2011 Apr 7;472(7341):86-9. doi: 10.1038/nature09904.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉University of Michigan, School of Natural Resources & Environment, Ann Arbor, Michigan 48109-1041, USA. bradcard@umich.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21475199" target="_blank"〉PubMed〈/a〉
    Keywords: *Biodiversity ; Biofilms/growth & development ; Biomass ; Chlorophyta/growth & development/*physiology ; Diatoms/growth & development/*physiology ; Environmental Policy ; Models, Biological ; Nitrogen/analysis/metabolism ; Population Density ; Rivers/*chemistry/*microbiology ; Species Specificity
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  • 91
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    Nature Publishing Group (NPG)
    Publication Date: 2011-11-11
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉England -- Nature. 2011 Nov 9;479(7372):149. doi: 10.1038/479149a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22071722" target="_blank"〉PubMed〈/a〉
    Keywords: Access to Information/*legislation & jurisprudence ; Confidentiality/legislation & jurisprudence ; Electronic Mail ; Research/*legislation & jurisprudence ; Research Personnel/*legislation & jurisprudence ; United States ; Universities/legislation & jurisprudence ; Virginia
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  • 92
    Publication Date: 2011-05-20
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Baker, Monya -- England -- Nature. 2011 May 19;473(7347):403, 405-8. doi: 10.1038/473403a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21593873" target="_blank"〉PubMed〈/a〉
    Keywords: Artemisinins/metabolism ; Biotechnology/trends ; Chromosomes, Artificial, Yeast ; Computational Biology/trends ; DNA/biosynthesis/genetics ; Escherichia coli/growth & development ; Genes/genetics ; Genetic Code/genetics ; Genetic Engineering/trends ; Genome/*genetics ; Genomics/methods ; Models, Biological ; Synthetic Biology/*trends
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  • 93
    Publication Date: 2011-02-05
    Description: Suppression of the invasive plant Salvinia molesta by the salvinia weevil is an iconic example of successful biological control. However, in the billabongs (oxbow lakes) of Kakadu National Park, Australia, control is fitful and incomplete. By fitting a process-based nonlinear model to thirteen-year data sets from four billabongs, here we show that incomplete control can be explained by alternative stable states--one state in which salvinia is suppressed and the other in which salvinia escapes weevil control. The shifts between states are associated with annual flooding events. In some years, high water flow reduces weevil populations, allowing the shift from a controlled to an uncontrolled state; in other years, benign conditions for weevils promote the return shift to the controlled state. In most described ecological examples, transitions between alternative stable states are relatively rare, facilitated by slow-moving environmental changes, such as accumulated nutrient loading or climate change. The billabongs of Kakadu give a different manifestation of alternative stable states that generate complex and seemingly unpredictable dynamics. Because shifts between alternative stable states are stochastic, they present a potential management strategy to maximize effective biological control: when the domain of attraction to the state of salvinia control is approached, augmentation of the weevil population or reduction of the salvinia biomass may allow the lower state to trap the system.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Schooler, Shon S -- Salau, Buck -- Julien, Mic H -- Ives, Anthony R -- England -- Nature. 2011 Feb 3;470(7332):86-9. doi: 10.1038/nature09735.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉CSIRO Ecosystem Sciences, Long Pocket Laboratories, Indooroopilly, Queensland 4068, Australia.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21293376" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Australia ; Biomass ; Ferns/*growth & development/physiology ; Floods ; *Fresh Water ; Introduced Species/statistics & numerical data ; Models, Biological ; Pest Control, Biological/methods/*statistics & numerical data ; Plant Weeds/*growth & development/physiology ; South America/ethnology ; Stochastic Processes ; Time Factors ; Weevils/*physiology ; *Wilderness
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  • 94
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    Publication Date: 2011-10-21
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉England -- Nature. 2011 Oct 19;478(7369):286. doi: 10.1038/478286a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22012348" target="_blank"〉PubMed〈/a〉
    Keywords: Early Detection of Cancer/*standards/trends ; Health Planning Guidelines ; Health Policy/*trends ; Humans ; Male ; Prostate-Specific Antigen/*analysis ; Prostatic Neoplasms/*diagnosis ; Public Health ; United States
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  • 95
    Publication Date: 2011-11-11
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Cressey, Daniel -- Butler, Declan -- England -- Nature. 2011 Nov 7;479(7372):159. doi: 10.1038/479159a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22071739" target="_blank"〉PubMed〈/a〉
    Keywords: Budgets ; Middle East ; United Nations/*economics/*organization & administration ; United States ; World Health Organization/organization & administration
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  • 96
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    Nature Publishing Group (NPG)
    Publication Date: 2011-10-21
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉England -- Nature. 2011 Oct 19;478(7369):285-6. doi: 10.1038/478285b.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22012347" target="_blank"〉PubMed〈/a〉
    Keywords: Lobbying ; *Politics ; Science/*economics/*education/trends ; United States
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  • 97
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    Nature Publishing Group (NPG)
    Publication Date: 2011-05-14
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Perkins, Sid -- England -- Nature. 2011 May 12;473(7346):243-4.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21568015" target="_blank"〉PubMed〈/a〉
    Keywords: Earth Sciences/education/manpower/*trends ; Employment/trends ; Europe ; United States
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  • 98
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    Nature Publishing Group (NPG)
    Publication Date: 2011-01-21
    Description: Both solid tumours and leukaemias show considerable histological and functional heterogeneity. It is widely accepted that genetic lesions have a major role in determining tumour phenotype, but evidence is also accumulating that cancers of distinct subtypes within an organ may derive from different 'cells of origin'. These cells acquire the first genetic hit or hits that culminate in the initiation of cancer. The identification of these crucial target cell populations may allow earlier detection of malignancies and better prediction of tumour behaviour, and ultimately may lead to preventive therapies for individuals at high risk of developing cancer.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Visvader, Jane E -- Medical Research Council/United Kingdom -- England -- Nature. 2011 Jan 20;469(7330):314-22. doi: 10.1038/nature09781.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Stem Cells and Cancer Division, The Walter and Eliza Hall Institute of Medical Research, Parkville, Victoria 3052, Australia. visvader@wehi.edu.au〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21248838" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; *Cell Lineage ; Hematologic Neoplasms/pathology ; Humans ; Models, Biological ; Neoplasms/diagnosis/genetics/*pathology/therapy ; Neoplastic Stem Cells/pathology ; Phenotype
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  • 99
    Publication Date: 2011-01-14
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Macilwain, Colin -- England -- Nature. 2011 Jan 13;469(7329):133. doi: 10.1038/469133a.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉cfmworldview@gmail.com〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21228831" target="_blank"〉PubMed〈/a〉
    Keywords: Budgets ; Economic Recession ; Great Britain ; Research Support as Topic/*economics ; Science/*economics/*standards ; Teaching/*economics/standards ; United States ; Universities/*economics/standards
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  • 100
    Publication Date: 2011-04-15
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Crofts, Stephanie B -- Summers, Adam P -- England -- Nature. 2011 Apr 14;472(7342):177-8. doi: 10.1038/472177a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21490665" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Desert Climate ; Lizards/*physiology ; Locomotion/*physiology ; Models, Biological ; *Silicon Dioxide ; Swimming/physiology
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