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  • nitrogen  (53)
  • gene expression  (49)
  • Springer  (101)
  • American Geophysical Union
  • MDPI Publishing
  • Springer Science + Business Media
  • 1990-1994  (101)
  • 1993  (101)
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  • Springer  (101)
  • American Geophysical Union
  • MDPI Publishing
  • Springer Science + Business Media
  • Wiley-Blackwell  (14)
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  • 1990-1994  (101)
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  • 1
    Electronic Resource
    Electronic Resource
    Springer
    Cellular and molecular life sciences 49 (1993), S. 133-137 
    ISSN: 1420-9071
    Keywords: Fetal hemoglobin ; sickle cell anemia ; β thalassemia ; butyrate ; gene expression
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Abstract The inherited β-hemoglobinopathies (sickle cell disease and β thalassemia) are the result of a mutation in the adult (β) globin gene. The fetal globin chain, encoded by the γ globin genes, can substitute for the mutated or defective β globin chain, but expression of the γ globin gene is developmentally inactivated prior to birth. Reinducing expression of the normal fetal globin genes is a preferred method of ameliorating sickle cell disease and the β thalassemias. Stimulation of as little as 4–8% fetal globin synthesis in the bone marrow can produce 〉20% fetal hemoglobin in the peripheral circulation, due to enhanced survival of red blood cells containing both sickle and fetal hemoglobin, compared to those containing sickle hemoglobin alone. Butyric acid and butyrate derivatives are generally safe compounds which induce fetal hemoglobin production by stimulating the promoter of the fetal globin genes. An initial trial with the parent compound, delivered as Arginine Butyrate, has demonstrated rapid stimulation of fetal globin expression to levels that have been shown to ameliorate these conditions. Phase 1 trials of an oral butyrate derivative with a long plasma half-life have just begun. These agents now provide a specific new apporach for ameliorating these classic molecular disorders and merit further investigation in larger patient populations.
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  • 2
    Electronic Resource
    Electronic Resource
    Springer
    Cellular and molecular life sciences 49 (1993), S. 447-455 
    ISSN: 1420-9071
    Keywords: Proteoglycan ; chondroitin sulfate ; decorin ; gene expression ; tumor stroma ; DNA methylation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Abstract Tumor stroma is a specialized form of tissue that is associated with epithelial neoplasms. Recent evidence indicates that significant changes in proteoglycan content occur in the tumor stroma and that these alterations could support tumor progression and invasion as well as tumor growth. Our main hypothesis is that the generation of tumor stroma is under direct control of the neoplastic cells and that, via a feedback loop, altered proteoglycan gene expression would influence the behavior of tumor cells. In this review, we will focus primarily on the work from our laboratory related to the altered expression of chondroitin sulfate proteoglycan and its role in tumor development and progression. The connective tissue stroma of human colon cancer is enriched in chondroitin sulfate and the stromal cell elements, primarily colon fibroblasts and smooth muscle cells, are responsible for this biosynthetic increase. These changes can be reproduced in vitro by using either tumor metabolites or co-cultures of human colon carcinoma cells and colon mesenchymal cells. The levels of decorin, a leucine-rich proteoglycan involved in the regulation of matrix assembly and cell proliferation, are markedly elevated in the stroma of colon carcinoma. These changes correlate with a marked increase in decorin mRNA levels and a concurrent hypomethylation of decorin gene, a DNA alteration associated with enhanced gene expression. Elucidation of decorin gene structure has revealed an unexpected degree of complexity in the 5′ untranslated region of the gene with two leader exons that are alternatively spliced to the second coding exon. Furthermore, a transforming growth factor beta (TGF-β)-negative element is present in the promoter region of decorin gene. This regulatory domain is likely to be implicated in the silencing of decorin gene by TGF-β and may contribute to the regulation of this matrix gene in the tumor stroma.
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  • 3
    Electronic Resource
    Electronic Resource
    Springer
    Nutrient cycling in agroecosystems 35 (1993), S. 217-226 
    ISSN: 1573-0867
    Keywords: calcium ; dry matter distribution ; fertilizer ; harvest index ; magnesium ; manure ; millet ; nitrogen ; nutrient uptake ; phosphorus ; potassium ; Senegal
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract In a fertilizer and manure experiment, millet was grown under four treatments (no fertilizer or manure, farmyard manure, chemical fertilizer, and both). Grain yield and total aboveground biomass production of the unfertilized plot were relatively high. The observed differences in total dry matter production must be attributed to differences in nutrient availability, as amount of rainfall and its distribution were favourable. Results show only small differences in distribution of dry matter among the various plant organs between the best and the non-fertilized treatments. Nutrient supply from natural sources, defined as crop content of N, P, and K at maturity without fertilizer application, amounted to 104, 16 and 103 kg ha−1, respectively, which are very high values. Total uptake of calcium and magnesium is related to that of potassium, as the combined content of these three elements is linearly related to total aboveground biomass production. Minimum removal of nitrogen and phosphorus per ton grain dry matter amounts to 29 and 4kg, respectively, and 9 kg potassium per ton total aboveground dry matter. A possible double function of phosphorus as element of structural biomass and for maintenance of electro-neutrality is discussed.
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  • 4
    Electronic Resource
    Electronic Resource
    Springer
    Nutrient cycling in agroecosystems 34 (1993), S. 121-126 
    ISSN: 1573-0867
    Keywords: Controlled release fertilizers ; electroultrafiltration ; nitrogen ; ryegrass
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The efficiency of different nitrogenous fertilizers under forced leaching conditions was determined in pot experiments using ryegrass as an indicator plant in a sandy loam soil. Treatments were: ON (unfertilized), AN (ammonium nitrate), U (urea), DAP (diammonium phosphate), T (Triabon), FK (Floranid Komplett) and CDU (crotonylidendiurea). N source effects on N uptake, and N leached (as % of N applied) were evaluated. Results show that the fertilizers which behaved best with regard to N uptake were FK followed by Triabon and AN. The most soluble fertilizers, AN and urea, gave the highest N leaching losses. Significant correlations between EUF-NI (rapidly soluble fraction) and leaching, as well as between EUF-N (I + II) and N uptake by the plant (where EUF-N II relates to the slowly soluble fraction) were obtained.
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  • 5
    ISSN: 1572-9680
    Keywords: alley cropping ; maize ; nitrogen ; organic matter ; soil fertility ; Leucaena leucocephala ; Flemingia congesta
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract A detailed study of the soil chemical and physical properties in seven-year-old alley cropping trial containingLeucaena leucocephala andFlemingia congesta in Northern Zambia is described. There was a strong correlation between the maize yield and the total amount of nitrogen applied, both from prunings and fertiliser, suggesting that a major reason for the observed benefit from alley cropping, particularly withLeucaena, was due to an improvement in nitrogen supply.Leucaena produced significantly more biomass, and its leaves had higher concentrations of nitrogen, phosphorous and potassium and lower C/N and C/P ratios than did those ofFlemingia. There was also evidence that the trees had a beneficial effect on other soil chemical properties; under the hedgerows, particularly those ofLeucaena, there were higher levels of organic carbon, Mg, K and ECEC, and pH values were also highest. It is suggested that higher levels of organic carbon in the alley crop treatments were responsible for the improvements observed in soil physical properties. Lower bulk density, lower penetration resistance, and a higher infiltration rate and pore volume fraction were measured in the alley crops, although there was no significant change in the soil water release parameters. A deteriorating effect of constant applications of nitrogen fertiliser on soil fertility was observed; as the level of urea application increased, there were significant decreases in Mg, K and pH, increases in Al and soil acidity, and higher penetrometer resistance. These results highlight the urgent need for further research on biological methods of maintaining soil fertility.
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  • 6
    Electronic Resource
    Electronic Resource
    Springer
    Aquatic sciences 55 (1993), S. 132-142 
    ISSN: 1420-9055
    Keywords: nitrogen ; phosphorus ; uptake ; regeneration
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Dissolved inorganic nutrient pools are small relative to particulate pools, and dissolved pools turnover rapidly. It has been observed that pools change little from day to day on the sampling scales usually employed. A simple model is presented where uptake and regeneration rates balance to cause a local steady state concentration for dissolved inorganic nutrients. Enrichment and dilution perturbation experiments with lake water support the idea of steady state nutrient concentrations. Although inorganic nutrient concentrations are often controlled by biota, the absolute concentrations present tell little about the activity of that biota.
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  • 7
    ISSN: 1423-0445
    Keywords: carbon/nutrient balance hypothesis ; carbon allocation ; fertilization ; phenolics ; nitrogen ; terpene ; Abies grandis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Nitrogen fertilization resulted in a linear increase in the growth ofAbies grandis seedlings, but linear decrease in foliage concentrations of phenolic compounds. These data are consistent with the inverse relationship between growth and production of carbonbased secondary chemicals predicted by the carbon/nutrient balance (CNB) hypothesis. However, in contrast to predictions of the CNB hypothesis, nitrogen fertilization had no effect on foliage terpene concentrations. The results suggest that not all carbon-based chemicals respond in the same manner to environmental variation, and that the carbon/nutrient balance hypothesis does not adequately explain all patterns of environmentally-induced variation in secondary metabolism.
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  • 8
    ISSN: 1573-4919
    Keywords: glucocorticoid receptor ; MMTV ; transcription factors ; gene expression
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Abstract The long terminal repeat (LTR) of the mouse mammary tumor virus was used as a template to examine the dual binding parameters of the glucocorticoid-receptor (GR) and a repressor protein termed Inhibitory Factor 1 (IF1). The roceptor binds specifically to the glucocorticoid response element and precludes the binding of IF1 to its juxtaposed binding site within the LTR. When the two DNA targets are separated by the insertion of an additional 52 base pairs, coincident binding of both proteins is observed. Gel retention assays reveal three distinct nucleoprotein complexes. The first complex consists of the receptor and the LTR, the second is comprised of IF1 and DNA and the third is a multiprotein-DNA complex consisting of the GR, IF1 and DNA, migrating at a higher molecular weight position. The inhibition of IF1 binding by the presence of prebound GR leads to the repression of transcription of juxtaposed genes. The GR may act to block access of a sequence, used by the cell to titrate repressor proteins and facilitate the onset of gene expression. (Mol Cell Biochem122: 25–37, 1993)
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  • 9
    Electronic Resource
    Electronic Resource
    Springer
    Molecular and cellular biochemistry 122 (1993), S. 147-158 
    ISSN: 1573-4919
    Keywords: PSG transcripts ; gene expression ; PCR ; T lymphocytes
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Abstract The presence of PSG in blood cells has been demonstrated by immunohistochemical staining. However, the origin of these proteins is not known. This report examines the expression of the PSG genes in different types of freshly isolated blood cells. RNA isolated from bone marrow and peripheral blood cells of healthy individuals was analyzed for PSG transcripts by reverse transcriptase-polymerase chain reaction using synthetic oligonucleotide primers specific for the PSG genes. The level of expression of the PSG genes in different types of cells exhibited significant individual variation. Trace amounts of PSG transcripts could be detected in polymorphonuclear cells (PMN), monocytes and B lymphocytes while T lymphocytes always contained the highest level of transcript. The expression of PSG genes in the blood cells apparently was not affected by the method of isolation nor by overnight culturing of these cells except in the case when lymphocytes were separated by rosetting with sheep red blood cells. All reported PSG transcripts were detected in blood cells. Both type I and type II transcripts of the PSG genes were detected in blood cells with the exception of type II transcript of PSG5 and PSG11 which were only found in the placenta. Tissue specificity in the expression or alternative splicing of some of the PSG family members was implicated.
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  • 10
    ISSN: 1573-1561
    Keywords: Artificial diet ; herbivory ; nitrogen ; Lymantria dispar ; Lepidoptera ; Lymantriidae ; monoterpenes ; nutritional ecology ; phenolics ; Pseudotsuga menziesii
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Abstract Two experiments were conducted to examine the influence of foliar nitrogen, terpenes, and phenolics of Douglas-fir on the development of gypsy moth larvae. In the first experiment, foliar concentrations of nitrogen and allelochemicals were manipulated by fertilizing 3-year-old potted seedlings with 0 or 200 ppm nitrogen. Concentrations of foliar nitrogen (0.33–2.38%) were negatively correlated with the phenolics (15.8–24.4 mg/g). Sixth-instar larvae previously reared on current-year Douglas-fir needles were allowed to feed on these seedlings. Pupal weights (312.8–995.6 mg) were positively correlated with levels of foliar nitrogen, negatively correlated with amounts of foliar phenolics, and uncorrelated with terpene concentrations. In the second experiment, terpene and phenolic extracts from Douglas-fir foliage were incorporated at natural levels into artificial diets with high and low levels of protein nitrogen. Neonate larvae grew faster and were larger on the high nitrogen control diet (4.1–4.5%), however, fourth instars performed better on the control diet with low nitrogen levels (2.5–2.7%). Foliar terpenes incorporated into diet had little effect on neonate fitness, but may induce subtle physiological changes in later instar larvae. Phenolics, alone or in combination with terpenes, excessively suppressed growth and survival, with no individuals living through the fourth instar, regardless of the nitrogen level. Incorporating foliar phenolic extracts into artificial diet caused unnatural levels of toxicity and failed to clarify the effects of Douglas-fir phenolics on gypsy moth fitness. Foliar nitrogen is a key factor influencing gypsy moth development on Douglas fir, but may be mitigated to some degree by phenolics.
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  • 11
    ISSN: 1573-5028
    Keywords: ABA ; cDNA cloning ; freezing tolerance ; gene expression ; osmotin-like protein ; Solanum commersonii
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract We have isolated a cDNA (pA13) of an ABA-responsive gene from suspension cultures of Solanum commersonii. The deduced amino acid sequence of pA13 cDNA revealed 89 and 91% identity with tobacco osmotin and tomato NP24 protein, respectively. The accumulation of the transcript corresponding to pA13 cDNA was regulated by ABA, cold temperature, and low water potential treatments. Cold-induced accumulation of the pA13 transcript was partially suppressed by fluridone, an ABA synthesis inhibitor, and the suppression was restored by exogenous ABA application. The transcript corresponding to pA13 also accumulated in an organ-specific manner in response to ABA or cold treatment.
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  • 12
    ISSN: 1573-5028
    Keywords: α-tubulin ; Arabidopsis ; β-glucuronidase ; gene expression ; transformation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract In Arabidopsis tissues, the pool of tubulin protein is provided by the expression of multiple α-tubulin and β-tubulin genes. Previous evidence suggested that the TUA2 α-tubulin gene was expressed in all organs of mature plants. We now report a more detailed analysis of TUA2 expression during plant development. Chimeric genes containing TUA2 5′-flanking DNA fused to the β-glucuronidase (GUS) coding region were used to create transgenic Arabidopsis plants. Second-generation progeny of regenerated plants were analyzed by histochemical assay to localize GUS expression. GUS activity was seen throughout plant development and in nearly all tissues. The blue product of GUS activity accumulated to the highest levels in tissues with actively dividing and elongating cells. GUS activity was not detected in a few plant tissues, suggesting that, though widely expressed, the TUA2 promoter is not constitutively active.
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  • 13
    ISSN: 1573-5028
    Keywords: wounding ; elicitor ; plant defense ; gene expression ; tuber ; Solanum tuberosum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract We have characterized a genomic clone containing the potato pathogenesis-related genes STH-2 and STH-21. The two genes are found 4 kb apart on the same chromosome and their sequences are highly similar. They present the same transcriptional orientation and are both interrupted by a single intron. A chimaeric gene consisting of 1015 bp of 5′-flanking sequence and part of the first exon of STH-2 fused to the bacterial β-glucuronidase gene was highly-expressed in tubers of transgenic potato plants after wounding and elicitor treatments. The levels of activity observed in these transgenic plants parallel those observed for the accumulation of STH-2 mRNAs under similar conditions. This indicates that cis-acting elements necessary for the proper activation of the gene are present within 1 kb of 5′-flanking sequences. Functional analysis of 5′ deletions of the STH-2/GUS constructs by transient expression in leaf protoplasts revealed the presence of an upstream regulatory sequence between -135 and -52 which contains a TGAC motif, and a possible negative regulatory region between -52 and -28. A factor present in nuclear extracts of wounded potato tubers was found to bind specifically to nucleotides located between -135 to -105, suggesting that this region contains important cis-regulatory elements.
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  • 14
    Electronic Resource
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    Plant molecular biology 21 (1993), S. 429-435 
    ISSN: 1573-5028
    Keywords: azacytidine ; DNA methylation ; gene expression ; inactivation ; transformation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract We have studied the effect of the demethylating agent azacytidine (azaC) on expression of a β-glucuronidase (GUS) gene transferred to tobacco leaf disks by Agrobacterium-mediated transformation. In a system where no selection was performed, where shoot formation was partially repressed, and where Agrobacterium does not express the GUS gene, we were able to follow the early events of transient and stable expression. Two days after inoculation, 8% of the cells expressed GUS but this proportion rapidly decreased to near zero in the following week. Treatment of leaf disks with azaC just after transformation retarded this inactivation to some extent, while treatment of Agrobacterium prior to transformation increased the frequency of transient expression. Three weeks after inoculation the number of GUS-expressing cells increased 4- to 6-fold in the leaf disks treated with azaC and in the leaf disks transformed with azaC-treated bacteria, while the control remained low. These data suggest that DNA methylation is involved in transgene inactivation and that a large number of silent but potentially active transgenes become integrated.
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  • 15
    ISSN: 1573-5028
    Keywords: transformation ; promoters ; introns ; gene expression ; Oryza sativa ; Hordeum vulgare ; Lolium perenne
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Transcriptional and translational fusions were made between the reading frame coding for β-D-glucuronidase and sequences of either a constitutively expressed rice gene (GOS2) involved in initiation of translation or a light-inducible rice gene (GOS5). The transient expression of the fusions was studied via particle bombardment of seedling tissues of rice, perennial ryegrass and barley. Furthermore, the results of transient and stable expression were compared for cell suspensions of four rice varieties, one barley variety and one perennial ryegrass variety. TheGOS2-gusA fusions were active in all three monocots studied. Best results were obtained for a construct having both a transcriptional and a translational fusion as well as intron and exon sequences (PORCEHyg). The level of GUS activity was in the range of activities as obtained by the 35S CaMV promoter transcriptionally fused togusA. ThegusA fusion with the light-inducible gene (GOS5) was active in green seedling tissues of all monocots studied. Also a weak expression compared to theGOS2 constructs was found in stably transformed rice callus. ThegusA fusions with the mannopine synthase promoters 1′ and 2′ of the TR-DNA were transiently expressed at lower levels in cell suspensions than PORCEHyg. For stably transformed rice callus the expression of theGOS2-gusA fusion often decreased during prolonged subculture. This decrease in GUS activity and the various GUS-staining phenotypes of transgenic calli are explained by the presence of different cell types in the suspensions used and in the calli. It is presumed that the nature of the cells and their relative contribution in the calli change drastically upon further subculture.
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  • 16
    ISSN: 1573-5028
    Keywords: circadian regulation ; enzyme activity ; gene expression ; light regulation ; nitrate reductase ; phytochrome
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The expression of a number of plant genes is regulated by an endogenous circadian clock. We report that the Arabidopsis NIA2 (nitrate reductase) gene shows robust circadian oscillations in mRNA accumulation which persist for at least 5 days in plants that have been grown in a light-dark (LD) cycle and then transferred to continuous light (LL). We further show that NIA2 mRNA accumulation oscillates in a circadian fashion in plants that have been grown in LD and then transferred to continuous darkness (DD). Results from nuclear run-on transcriptional analysis suggest that the oscillations in steady-state levels of NIA2 mRNA abundance are not primarily due to changes in transcription but, instead, reflect post-transcriptional regulation. The circadian oscillations in NIA2 mRNA abundance are paralleled by circadian oscillations in nitrate reductase enzyme activity (NR activity) in Arabidopsis plants that have been grown in LD and then transferred either to DD or to LL. Etiolated Arabidopsis seedlings express neither NIA2 mRNA nor NR activity. However, both NIA2 mRNA accumulation and NR activity are induced by exposure to white light. The inductive effects of light on NIA2 mRNA accumulation are due, at least in part, to a very low fluence phytochrome-mediated response. However, the persistence of circadian oscillations in NIA2 mRNA abundance for at least 5 days in LL demonstrates that the circadian clock is capable of overriding or gating the inductive effects of light on NIA2 mRNA accumulation in Arabidopsis for an extended, continuous period of time.
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  • 17
    ISSN: 1573-5028
    Keywords: gene expression ; germination ; transcription factor ; wheat histone gene ; wheat seedling
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The expression of genes encoding five histones (H1, H2A, H2B, H3 and H4) and the putative transcription factors HBP-1a (17) and HBP-1b (c38) was examined during early germination and in various tissues of young wheat seedlings. The steady-state levels of core histone (H2A, H2B, H3 and H4) mRNAs were coordinately cell cycle-dependent and paralleled the rate of DNA synthesis during early germination, whereas the expression pattern of the linker histone (H1) genes differed. The five subclass histone genes were actively expressed in the meristematic tissues of young seedlings. Moreover, H1 genes were expressed in leaves that consist mostly of non-proliferating cells, in which core histone genes showed little expression. Quantitative alterations to the mRNAs of the putative transcription factors HBP-1a (17) and HBP-1b (c38) of wheat histone genes were similar to those of the core histone mRNAs, suggesting that both factors function in the cell cycle-dependent expression of wheat core histone genes.
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  • 18
    ISSN: 1573-5028
    Keywords: transformation ; promoters ; introns ; gene expression ; Oryza sativa ; Hordeum vulgare ; Lolium perenne
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Transcriptional and translational fusions were made between the reading frame coding for β-D-glucuronidase and sequences of either a constitutively expressed rice gene (GOS2) involved in initiation of translation or a light-inducible rice gene (GOS5). The transient expression of the fusions was studied via particle bombardment of seedling tissues of rice, perennial ryegrass and barley. Furthermore, the results of transient and stable expression were compared for cell suspensions of four rice varieties, one barley variety and one perennial ryegrass variety. The GOS2-gusA fusions were active in all three monocots studied. Best results were obtained for a construct having both a transcriptional and a translational fusion as well as intron and exon sequences (PORCEHyg). The level of GUS activity was in the range of activities as obtained by the 35S CaMV promoter transcriptionally fused to gusA. The gusA fusion with the light-inducible gene (GOS5) was active in green seedling tissues of all monocots studied. Also a weak expression compared to the GOS2 constructs was found in stably transformed rice callus. The gusA fusions with the mannopine synthase promoters 1′ and 2′ of the TR-DNA were transiently expressed at lower levels in cell suspensions than PORCEHyg. For stably transformed rice callus the expression of the GOS2-gusA fusion often decreased during prolonged subculture. This decrease in GUS activity and the various GUS-staining phenotypes of transgenic calli are explained by the presence of different cell types in the suspensions used and in the calli. It is presumed that the nature of the cells and their relative contribution in the calli change drastically upon further subculture.
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  • 19
    ISSN: 1573-5028
    Keywords: cold ; low temperature ; barley ; gene expression ; cDNA ; shoot meristem
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A cDNA clone of the previously unreported low-temperature-induced gene blt101 was isolated after a differential screen of a cDNA library prepared from low-temperature (6 °C day/2 °C night) grown barley shoot meristems. Southern blot analysis of barley ditelosomic addition lines was used to assign this single-copy gene to the long arm of chromosome 4. Analysis of steady-state levels of blt101 mRNA showed the induction of this transcript in shoot meristems upon transfer of barley (cv. Igri) plants from control (20 °C/15 °C) to low (6 °C/2 °C) temperature treatment. Further, the high level of this transcript is maintained at low temperatures but is reduced on transfer from low to control temperatures. The gene is not induced by drought or by foliar application of ABA. Analysis of segregating doubled haploid lines shows that there is no specific association of this gene with either spring/winter growth habit or frost hardiness. Examination of the spatial expression pattern revealed ubiquitous expression of blt101 in low-temperature (6 °C/2 °C) grown barley shoot meristems, mature leaves and roots.
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  • 20
    ISSN: 1573-5028
    Keywords: embryos ; gene expression ; oleosin ; rapeseed
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The temporal and spatial expression of oleosin and Δ9-stearoyl-ACP desaturase genes and their products has been examined in developing embryos of rapeseed, Brassica napus L. var. Topas. Expression of oleosin and stearate desaturase genes was measured by in situ hybridisation at five different stages of development ranging from the torpedo stage to a mature-desiccating embryo. The temporal pattern of gene expression varied dramatically between the two classes of gene. Stearate desaturase gene expression was relatively high, even at the torpedo stage, whereas oleosin gene expression was barely detectable at this stage. By the stage of maximum embryo fresh weight, stearate desaturase gene expression had declined considerably while oleosin gene expression was at its height. In contrast to their differential temporal expression, the in situ labelling of both classes of embryo-specific gene showed similar, relatively uniform patterns of spatial expression throughout the embryo sections. Immunogold labelling of ultra-thin sections from radicle tissue with anti-oleosin antibodies showed similar patterns to sections from cotyledon tissue. However, whereas at least three oleosin isoforms were detectable on western blots of homogenates from cotyledons, only one isoform was found in radicles. This suggests that some of the oleosin isoforms may be expressed differentially in the various types of embryo tissue. The differential timing of stearate desaturase and oleosin gene expression was mirrored by similar differences in the timing of the accumulation of their ultimate products, i.e. storage oil and oleosin proteins. Oil-body fractions prepared from young (2.5 mg) embryos contained very little oleosin protein, as examined by SDS-PAGE and western blotting, whereas identically prepared fractions from dry seeds contained over 10% (w/w) oleosin. Dehydration of oil bodies from young embryos resulted in their breakdown and coalescence into large clumps of oil which could not be re-emulsified, even after rehydration. In contrast, the oleosin-rich oil bodies from mature embryos were stable to dehydration and subsequent rehydration. It is suggested that, in developing rapeseed embryos, the accumulation of storage oil and oleosins is not concomitant but that the eventual deposition of oleosins onto the surfaces of storage oil bodies is essential for their stability during seed desiccation.
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  • 21
    ISSN: 1573-5028
    Keywords: allergens ; gene expression ; microsporogenesis ; pectate lyase ; pollen ; Zea mays
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A cDNA clone (Zm58.1) was isolated by differential screening from a cDNA library made to mature Zea mays pollen, and shown to be pollen-specific by RNA blot analysis. When this partial-length clone was used to probe a genomic library, a similar but distinct pollen-specific genomic clone (68% sequence identity) was isolated (Zm58.2). The putative proteins coded for by these two clones show sequence homology to several flower-expressed gene products from various plant species, including known pollen allergens from short ragweed (Ambrosia artemisiifolia), and to pectate lyases from the plant pathogenic bacteria Erwinia spp. The two genes map to different chromosomes.
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  • 22
    ISSN: 1573-5028
    Keywords: Arabidopsis thaliana ; blue light ; floral induction ; gene expression ; membrane protein ; DNA sequence
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Continuous irradiation with blue light (400–500 nm) induces flower formation in plantlets of Arabidopsis thaliana (C24) while red light (600–700 nm) is ineffective. This observation started a search for genes that are activated by blue light and initiate the morphogenic programme leading to flower formation. Several genes were identified via their cDNAs. From these clone AthH2, with an open reading frame for a hydrophobic 30.5 kDa polypeptide, was selected for further characterization of the corresponding gene. From a genomic library a DNA fragment of about 6.4 kb was isolated, comprising the coding region as well as 5′-upstream and 3′-downstream flanking segments. The coding region is composed of four exons, which specify a polypeptide of 286 amino acids. Several potential regulatory elements were found between position −670 and −1140 including GA and ABA sequence motifs. The latter could account for the observed induction of the AthH2 gene by ABA. Southern blot analysis of Arabidopsis genomic DNA suggests that the AthH2 gene is encoded by a single-copy gene. Hydropathy plots and secondary structure analysis of the putative polypeptide predict six membrane-spanning domains implicating a function as transmembrane channel protein. It displays significant homology with the proteins TR7a of pea (82%) and RD 28 of A. thaliana (68%).
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  • 23
    ISSN: 1573-4927
    Keywords: muscle protein degradation ; calpain ; gene expression ; genetic variation ; Japanese quail
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Abstract Calpain activity was determined by western blot analysis of steady-state concentrations ofm-calpain (calpain requiring millimolar Ca2 for activation) and also by northern blot analysis of steady-state concentrations of mRNA encodingm-calpain in three lines of quail: a random-bred control line (RR) and two lines selected for body weight, one for increased body weight (LL) and another for decreased body weight (SS). Them-calpain activities in skeletal muscle were higher in the SS line and lower in the LL line. From western blot analysis, enzyme levels of calpain were almost the same for all three lines. At the level of gene expression, the mRNA concentration encodingm-calpain was higher in the LL and lower in the SS line. These results suggest that the regulation of calpain activity in skeletal muscle is a three-step process, regulation at the transcription level, regulation at the enzyme level, and regulation of the activation of calpain.
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  • 24
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    Plant molecular biology 21 (1993), S. 709-715 
    ISSN: 1573-5028
    Keywords: cDNAs ; seed storage proteins ; Pseudotsuga menziesii ; gene expression ; nucleotide sequence
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A cDNA library was made from poly(A)+ RNA isolated from developing Douglas fir (Pseudotsuga menziesii) embryo and megagametophytic tissue, and the cDNA clones were identified by immunoscreening with polyclonal antiserum against the crystalloid storage protein complex of Douglas fir. The nucleotide sequence of the longest cDNA insert (DF1) was analysed. The amino acid sequence derived from the DNA sequence verified its identity as a legumin-like storage protein (pseudotsugin) and confirmed that the protein is synthesized as a precursor similar to the 11–12S storage globulins. The transcripts corresponding to cDNA insert DF1 were abundant in the early-to mid-stages of embryogenesis in the diploid embryonic axes as well as in the haploid megagametophytic tissue. The deduced amino acid sequence of pseudotsugin consists of a 29 amino acid N-terminal signal peptide preceding the acidic polypeptide region (286 amino acids) and the subsequent basic polypeptide region (212 amino acids). The site for post-transcriptional cleavage of the precursor polypeptide to make the A and B polypeptides is localized between asparagine −315 and glycine −316 and is highly conserved between angiosperms and gymnosperms. The deduced amino acid sequence for the DF1 cDNA clone reveals that pseudotsugin is rich in arginine, glutamic acid and serine and is low in cysteine, methionine and lysine. Comparison of the deduced amino acid sequence of Douglas fir pseudotsugin shows between 29–38.5% identity with angiosperm species, 63% identity with interior spruce, and 60% identity with eastern white pine.
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  • 25
    ISSN: 1573-5028
    Keywords: gene expression ; Glycine max ; protein-DNA interaction ; seed storage protein gene ; transcriptional regulation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A 2.2 kb fragment containing the 5′-flanking region of the soybean glycinin A2B1a gene and its successive deletions with a shorter 5′-flanking sequence were fused, in frame, to the β-glucuronidase (GUS) reporter gene. The resultant fusions were introduced into tobacco plants via Agrobacterium tumefaciens. Assays of the GUS activity in seeds of transgenic tobacco showed that the upstream region, −657 to −327 (relative to the transcription initiation site [+1]), of the glycinin gene is required for optimal expression of the transformed gene. Interactions between embryo nuclear factors and DNA fragments covering the downstream region of −326, in which are included the TATA box and legumin boxes, were not apparent. The embryo factors capable of binding specifically to three subregions, −653 to −527, −526 to −422, and −427 to −321, of the upstream regulatory region were detected. Such factors appeared to be organ-specific and could be found solely in developing seeds at the early middle stage of embryogenesis (around 24 days after flowering). Evidence obtained by characterizing the nature of the binding proteins and by gel mobility shift assays established that the same factor does interact with a consensus motif 5′-ATA/TATTTCN-/CTA-3′ which occurs four times in the cis-acting regulatory region between −657 and −327. Moreover, this conserved motif could also be found in the 5′ regulatory region of another glycinin A1aB1b gene. Thus it is likely that the observed interaction between the nuclear factor and the conserved motifs would lead to activation of transcription from the glycinin genes in maturing soybean seeds.
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  • 26
    ISSN: 1573-5028
    Keywords: auxin ; localization ; gene expression ; beta-galactosidase ; Arabidopsis ; auxin-inducible promoter
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Five constructions containing deletions of the promoter from an auxin-inducible gene of Arabidopsis thaliana, AtAux2-11, were fused to the coding region of the reporter gene LacZ, which encodes β-galactosidase, and a polyadenylation 3′-untranslated nopaline synthase sequence from Agrobacterium. These chimeric genes were introduced into Arabidopsis by Agrobacterium tumefaciens-mediated transformation, and expression of the gene was examined by spectrophotometric and histochemical analyses. A 600 bp fragment from the AtAux2-11 promoter conferred histochemical patterns of staining similar to the longest 5′ promoter tested, a 3.0 kb fragment. Localization of AtAux2-11/LacZ activity in the transgenic plants revealed spatial and temporal expression patterns that correlated with tissues and cells undergoing physiological processes modulated by auxin. LacZ activity was expressed in the elongating region of roots, etiolated hypocotyls, and anther filaments. Expression was detected in the vascular cylinder of the root and the vascular tissue, epidermis, and cortex of the hypocotyl, and filament. The AtAux2-11/LacZ gene was preferentially expressed in cells on the elongating side of hypocotyls undergoing gravitropic curvature. Expression of the chimeric gene in the hypocotyls of light-grown seedlings was less than that in etiolated seedling hypcotyls. The AtAux2-11/LacZ gene was active in the root cap, and expression in the root stele increased at sites of lateral root initiation. Staining was evident in cell types that develop lignified cell walls, e.g. trichomes, anther endothecial cells, and especially developing xylem. The chimeric gene was not expressed in primary meristems. While the magnitude of expression increased after application of exogenous auxin (2,4-D), the histochemical localization of AtAux2-11/LacZ remained unchanged. Transgenic plants with a 600 bp promoter construct (−0.6 kb AtAux2-11/LacZ) had higher levels of basal and auxin-inducible expression than plants with a 3.0 kb promoter construct. Transgenic plants with a −500 bp promoter had levels of expression similar to the −3.0 kb construct. The −0.6 kb AtAux2-11/LacZ gene responded maximally to a concentration of 5 × 10−6 to 5 × 10−5 M 2,4-D and was responsive to as little as 5 × 10−8 M. The evidence presented here suggests that this gene may play a role in several auxin-mediated developmental and physiological processes.
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  • 27
    ISSN: 1573-5028
    Keywords: down-regulation ; gene expression ; polygalacturonase ; pectinesterase ; chimaeric sense gene ; transgenic ; co-suppression
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Tomatoes (Lycopersicon esculentum Mill cv. Ailsa Craig) were transformed with a gene construct having 244 bp of the 5′ end of a polygalacturonase (PG) cDNA, coding for a 71 amino acid N-terminal extension to the mature protein, fused to 1320 bp of a pectinesterase (PE) cDNA encoding the full sequence of the mature PE protein. This chimaeric gene was inserted in a sense orientation between a CaMV 35S promoter and terminator for constitutive expression. In transformed tomato plants expression of the endogenous PG and PE genes in the fruit was inhibited; there was little or no observable PG and PE mRNA and a substantial reduction in the level of PG and PE enzyme activity. The transgene was expressed in the leaves of the transformed plants as demonstrated by the accumulation of mRNA, but no protein product could be identified. However, no transgene mRNA or protein were observed in the transgenic fruit. This paper represents the first report of the down-regulation of two non-homologous endogenous genes using a single gene construct. A sense gene construct was responsible for these effects. These findings are discussed in relation to possible mechanisms of action of co-suppression.
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  • 28
    ISSN: 1573-5028
    Keywords: cowpea ; cystatin ; cysteine endoproteinases ; gene expression ; insect resistance
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    Topics: Biology
    Notes: Abstract A cDNA encoding a cysteine proteinase inhibitor was isolated from a cDNA library prepared from developing seeds of an insect-resistant line of cowpea. The sequence of the encoded protein was homologous with those of other plant cysteine endoproteinase inhibitors, and with Type 2 cystatins from animals. Southern blot analyses indicated that small gene families were present in both resistant and susceptible lines of cowpea, while northern blot analyses showed similar levels of expression. It is concluded that the levels of expression of the inhibitor do not account for the differences in insect resistance of the two lines.
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  • 29
    ISSN: 1573-5028
    Keywords: dehydrogenase ; ethylene ; fruit ; gene expression ; UDP glucuronosyl/glucosyl transferase
    Source: Springer Online Journal Archives 1860-2000
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    Notes: Abstract A cDNA library produced from mRNA isolated from the pericarp of wild-type tomato fruit (Lycopersicon esculentum Mill. cv Ailsa Craig) at the first visible sign of fruit ripening was differentially screened to identify clones whose homologous mRNAs were present at reduced levels in fruit of the tomato ripening mutant, ripening inhibitor,rin. Five clones were isolated (pERT 1, 10, 13, 14, 15). Accumulation of mRNA homologous to each of these clones increased during the ripening of wild-type fruit and showed reduced accumulation in ripening rin fruit. The levels of three of them (homologous to ERT 1, 13 and 14) were increased by ethylene treatment of the mutant fruit. A further clone, ERT 16 was identified for a mRNA present at a high level in both normal and mutant fruit at early stages of ripening. Database searches revealed no significant homology to the DNA sequence of ERT 14 and 15; however, DNA and derived amino acid sequence of ERT 1 both contain regions of homology with several reported UDP-glucosyl and glucuronosyl transferases (UDPGT) and with a conserved UDPGT motif. A derived amino acid sequence from the ERT 10 cDNA contains a perfect match to a consensus sequence present in a number of dehydrogenases. The ERT 13 DNA sequence has homology with an mRNA present during potato tuberisation. The presence of these mRNAs in tomato fruit is unreported and their role in ripening is unknown. The ERT 16 DNA sequence has homology with a ripening/stress-related cDNA isolated from tomato fruit pericarp.
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  • 30
    ISSN: 1573-5028
    Keywords: ethylene ; histamine ; gene expression ; Lycopersicon esculentum ; ripening mutant ; ripening inhibitor
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract DNA sequencing of a tomato ripening-related cDNA, TOM 92, revealed an open reading frame with homology to several pyridoxal 5′-phosphate histidine decarboxylases, containing the conserved amino acid residues known to bind pyridoxal phosphate and α-fluoromethylhistidine, an inhibitor of enzyme activity. TOM 92 mRNA accumulated during early fruit ripening and then declined. Fruit of the ripeningimpaired tomato mutant, ripening inhibitor (rin), did not accumulate TOM 92 mRNA, and its accumulation was not restored by treatment of fruit with ethylene. The TOM 92 mRNA was not detected in tomato leaves and unripe fruit.
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  • 31
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    Plant molecular biology 23 (1993), S. 889-894 
    ISSN: 1573-5028
    Keywords: gene expression ; in situ hybridization ; photosystem I subunit ; rice ; suil
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    Topics: Biology
    Notes: Abstract The cell-type-specific expression of three rice genes, GOS2, GOS5 and GOS9, was studied by mRNA in situ hybridization. Previous northern blot analysis revealed that these genes were constitutive, green tissue-specific and root-specific, respectively. In this study, GOS2 transcripts were observed in all leaf cell types. In roots, a temporal and spatial expression pattern was noticed. Higher mRNA levels were observed in lateral roots, especially in parenchymal cells of the vascular cylinder. Expression of GOS5 was mainly found in chloroplast-containing cells. For GOS9, significant levels of signal were observed in root and leaf sections.
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  • 32
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    Molecular biology reports 18 (1993), S. 37-41 
    ISSN: 1573-4978
    Keywords: gene expression ; histone acetylation ; mononucleosomal particles ; RNA polymerase II ; transcription
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    Topics: Biology
    Notes: Abstract Although a correlation between chemical acetylation of the amino-terminal tails of core histones and stimulation of RNA synthesis has been reported for nucleosomal core particles (Piñeiro et al. (1991) Biochem. Biophys. Res. Commun. 177: 370), no differences in transcription are detected between acetylated and nonacetylated mononucleosomal particles obtained from HeLa cells in the presence and absence of n-butyrate. Apparently, the lysine residues modified in the presence of n-butyrate are not the same responsible for the observed acetylation-induced transcription. The acetylation obtained with n-butyrate might be significantly different from that present in transcriptionally active chromatin.
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  • 33
    ISSN: 1573-5028
    Keywords: gene expression ; jasmonic acid ; Kunitz-type proteinase inhibitor ; patatin ; potato (Solanum tuberosum L.) ; wounding
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Messenger RNAs of a potato (Solanum tuberosum L.) Kunitz-type proteinase inhibitor(s) (PKPI) were present in potato disks excised from tubers stored for 14 months (old tubers) or 2 months (young tubers) after harvest, and disappeared during the aseptic culture. The PKPI mRNA accumulation was found to be induced in potato disks from the old tubers by the addition of jasmonic acid (JA) [3-oxo-2-(2′-cis-pentenyl)-cyclopentane-1-acetic acid].
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  • 34
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    Plant molecular biology 21 (1993), S. 1171-1174 
    ISSN: 1573-5028
    Keywords: transmembrane receptor ; protein kinase ; self-incompatibility ; gene expression
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The extracellular of the putative receptor-like protein kinase, ZmPK1, is related to the self-incompatibility locus (S-locus) genes of Brassica. We have isolated and characterized a genomic DNA clone of ZmPK1 and three additional genes from maize that are highly related to ZmPK1. These three S-locus related genes do not appear to have the protein kinase catalytic domain that is found in ZmPK1. One or more of these genes are expressed specifically in the silks. This initial description of S-locus related genes in monocotyledonous plants suggests that the S-locus domain may be involved in several different cellular functions in a wide variety of plants.
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  • 35
    ISSN: 1573-5028
    Keywords: Arabidopsis ; calmodulin sequence ; gene expression
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Three new, unique cDNA sequences encoding isoforms of calmodulin (CaM) were isolated from an Arabidopsis cDNA library cloned in λgt10. These sequences (ACaM-4, -5, and -6) represent members of the Arabidopsis CaM gene family distinct from the three DNA sequences previously reported. ACaM-4 and -6 encode full-length copies of CaM mRNAs of ca. 0.75 kb. The ACaM-5 sequence encodes a partial length copy of CaM mRNA that is lacking sequences encoding the amino-terminal 10 amino acids of mature CaM and the initiator methionine. The derived amino acid sequence of ACaM-5 is identical to the sequences encoded by two of the previously characterized ACaM cDNAs, and is identical to TCH-1 mRNA, whose accumulation was increased by touch stimulation. The polypeptides encoded by ACaM-4 and -6 differ from that encoded by ACaM-5 by six and two amino acid substititions, respectively. Most of the deduced amino acid sequence substitutions in the Arabidopsis CaM isoforms occurred in the fourth Ca2+-binding domain. Polymerase chain reaction amplification assays of ACaM-4, -5 and -6 mRNA sequences indicated that each accumulated in Arabidopsis leaf RNA fractions, but only ACaM-4 and -5 mRNAs were detected in silique total RNA. The six different CaM cDNA sequences each hybridize with unique Eco RI restriction fragments in genomic Southern blots of Arabidopsis DNA, indicating that these sequences were derived from distinct structural genes. Our results suggest that CaM isoforms in Arabidopsis may have evolved to optimize the interaction of this Ca2+-receptor protein with specific subsets of response elements.
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  • 36
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    Plant molecular biology 22 (1993), S. 517-523 
    ISSN: 1573-5028
    Keywords: ethylene ; gene expression ; Arabidopsis thaliana ; glutathione S-transferase
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A cDNA clone obtained from Arabidopsis leaf RNA encodes a 24 kDa protein with homology to glutathione S-transferases (GST). It is most homologous with a tobacco GST (57% identity). In Arabidopsis, expression of GST mRNA is regulated by ethylene. Exposure of plants to ethylene increased the abundance of GST mRNA, while treatment with norbornadiene had the reverse effect. Ethylene had no effect on the mRNA level in ethylene-insensitive etr1 plants. The abundance of this mRNA increased with the age of plants. DNA hybridizations indicate that GSTs are encoded by a large multigene family in Arabidopsis.
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  • 37
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    Plant molecular biology 22 (1993), S. 873-885 
    ISSN: 1573-5028
    Keywords: β-conglycinin ; gene expression ; legumin box ; seed storage protein ; vicilin box
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Genes encoding the β-conglycinin seed storage proteins of soybean are expressed only in seeds during specific stages of development. The different subunits of β-conglycinin, α′, α and β, are encoded by distinct members of a gene family. Yet there are marked differences in the regulation of the genes encoding the α′/α and β subunits. Previous work (Chen et al., EMBO J 7: 297–302, 1988) identified a seed specific transcriptional enhancer upstream of a gene encoding the α′ subunit. Mutations were made within this region to discern its functional components. Among those identified is a 62 bp region (between −77 and −140) that contains a vicilin box consensus sequence as well as a sequence that binds the soybean nuclear factor SEF4 in vitro. A second region, which contains a sequence homologous to the core of the legumin box consensus (i.e., CATGCAT-like or RY repeat element) at −246, was also shown to affect the activity of this enhancer in transgenic plants. A series of 5′ terminal deletions were used to identify regulatory elements upstream of the β subunit gene. Two regions were identified (from −553 to −442 and from −308 to −72) that, when deleted, led to a marked reduction in gene expression. Both of these elements contain sequences that bind SEF4 in vitro. The distal element also contains an AT-rich segment that recognizes a second nuclear factor, SEF1, in vitro. Neither of these elements contains any homology to the vicilin box consensus.
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  • 38
    ISSN: 1573-5028
    Keywords: chitinase ; gene expression ; pathogenesis-related protein ; plant-fungus interaction
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Complementary DNA clones encoding acidic and basic isoforms of tomato chitinases were isolated fromCladosporium fulvum-infected leaves. The clones were sequenced and found to encode the 30 kDa basic intracellular and the 26 and 27 kDa acidic extracellular tomato chitinases previously purified (M.H.A.J. Joostenet al., in preparation). A fourth truncated cDNA which appears to encode an extracellular chitinase with 82% amino acid similarity to the 30 kDa intracellular chitinase was also isolated. Characterization of the clones revealed that the 30 kDa basic intracellular protein is a class I chitinase and that the 26 and 27 kDa acidic extracellular proteins which have 85% peptide sequence similarity are class II chitinases. The characterized cDNA clones represent four from a family of at least six tomato chitinases. Southern blot analysis indicated that, with the exception of the 30 kDa basic intracellular chitinase, the tomato chitinases are encoded by one or two genes. Northern blot analysis showed that the mRNA encoding the 26 kDa acidic extracellular chitinase is induced more rapidly during an incompatibleC. fulvum-tomato interaction than during a compatible interaction. This difference in timing of mRNA induction was not observed for the 30 kDa basic intracellular chitinase.
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  • 39
    ISSN: 1573-5028
    Keywords: ferredoxin-binding subunit ; gene expression ; gene structure ; Nicotiana sylvestris ; photosystem I ; psaD
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The PSI-D subunit is the ferredoxin-binding site of photosystem I, and is encoded by the nuclear genepsaD. We isolated apsaD genomic clone fromNicotiana sylvestris, by screening a genomic library with apsaD cDNA which we previously cloned fromN. sylvestris (Yamamotoet al., Plant Mol Biol 17: 1251, 1991). Nucleotide sequence analysis revealed that this genomic clone contains apsaD gene, which does not correspond to thepsaD cDNA, so we designated these genespsaDb andpsaDa, respectively. ThepsaDb clone encodes a protein of 214 amino acids uninterrupted by introns. The N-terminal sequence determined for theN. sylvestris PSI-D protein encoded bypsaDb begins at the 49th residue. The products ofpsaDa andpsaDb share 82.7% and 79.5% identity at the amino acid and nucleotide levels, respectively. Genomic Southern analysis showed that two copies ofpsaD are present in theN. sylvestris genome. Ribonuclease protection assays and immunoblot analysis inN. sylvestris indicate that both genes are expressed in leaves, stems and flower buds, but neither is expressed in roots. During leaf development, the ratio ofpsaDb topsaDa mRNA increases from 0.12 in leaf buds to 0.36 in mature leaves. The relative abundance of the corresponding proteins decreased over the same developmental period. These results indicate that differential regulation mechanisms controlpsaDa andpsaDb expression at both the mRNA and protein levels during leaf development.
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  • 40
    ISSN: 1573-5028
    Keywords: kiwifruit ; actinidin ; protease activity ; GUS fusion ; gene expression ; fruit
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract We have examined the expression of actinidin, a cysteine protease found in kiwifruit, over the course of fruit development. Protease activity was first seen in fruit that had reached about half their final weight, and rose to high levels at harvest. The 5′-flanking region (nucleotides −1301 to +58) of a kiwifruit actinidin gene was fused to the β-glucuronidase (GUS)-coding region, and the chimaeric gene was introduced into transgenic petunia plants. Induction of the GUS gene was observed during the later stages of seed pod development, closely resembling the pattern of actinidin induction in fruit tissues of kiwifruit. Some GUS expression was also detected in the vascular system of the receptacle, leaves, stems and roots. A shorter promoter fragment consisting of nucleotides −115 to +58 conferred similar spatial and temporal regulation in some of the transgenic plants.
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  • 41
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    Plant molecular biology 23 (1993), S. 685-695 
    ISSN: 1573-5028
    Keywords: extensin ; gene expression ; hydroxyproline ; maize ; silk ; vegetative tissues
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract This study concerned the developmental regulation of wall-localized, hydroxyproline-containing proteins in maize tissues and organs. Silk and pericarp cell walls contained more peptidyl hydroxyproline than did walls of any vegetative tissue, although all tissues and organs accumulated these proteins as they matured. In many tissues, hydroxyproline-rich proteins are first associated with the wall in a soluble form before being insolubilized through covalent attachment to the matrix. Because hydroxyproline was more soluble earlier than later in development, it appears that insolubilization was occurring in maize tissues and organs as well. Tissue prints reacted with an anti-extensin antibody gave positive results, indicating the presence of a soluble form of this common hydroxyproline-rich glycoprotein (HRGP). Silk and pericarp cells actively synthesized this extensin from abundant transcripts. In vegetative tissues, extensin transcripts were somewhat more abundant in seedlings than in pre-anthesis or mature plants, but levels were much lower than in silk and pericarp. Southern blots of maize genomic DNA indicated that these extensin transcripts are encoded by a small multigene family. Potential roles for extensin in reproductive/protective tissues versus the embryo or vegetative tissues are suggested.
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  • 42
    ISSN: 1573-5028
    Keywords: α-amylase ; transgenic cell culture ; gene expression ; metabolic regulation ; Oryza sativa ; transcription
    Source: Springer Online Journal Archives 1860-2000
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    Notes: Abstract Expression of two genes in the α-amylase gene family is controlled by metabolic regulation in rice cultured cells. The levels of RAmy3D and RAmy3E mRNAs in rice cultured cells are inversely related to the concentration of sugar in the culture medium. Other genes in the rice α-amylase gene family have little or no expression in cultured cells; these expression levels are not controlled by metabolic regulation. A RAmy3D promoter/GUS gene fusion was metabolically regulated in the transgenic rice cell line 3DG, just as the endogenous RAmy3D gene is regulated. An assay of GUS enzyme activity in 3DG cells demonstrated that RAmy3D/GUS expression is repressed when sugar is present in the culture medium and induced when sugar is removed from the medium. The 942 bp fragment of the RAmy3D promoter that was linked to the coding region of the GUS reporter gene thus contains all of the regulatory sequences necessary for metabolic regulation of the gene.
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  • 43
    ISSN: 1573-9368
    Keywords: gene expression ; lacZ ; HPRT ; ES cells ; gene targeting
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Transgenes in mice often exhibit different expression patterns in different transgenic lines. While the basis for this phenomenon is not understood, it is widely believed that the site at which the transgene becomes integrated into the mouse genome is a major factor in determining the pattern of expression. Most transgenic mice have been produced by microinjection of DNA into the male pronucleus, which results in integration of tandem arrays of the transgene at random chromosomal sites. In the experiments described in this report, electroporation of embryonic stem (ES) cells was used to place single copies of alacZ transgene into either random sites or into the HPRT (hypoxanthine phosphoribosyl transferase) locus of the mouse genome. Expression oflacZ was assayed by histochemical staining forEscherichia coli β-galactosidase activity in ES cells and in differentiated derivatives obtained by teratocarcinoma formation. Several of the randomly integrated cell lines expressedlacZ at high levels in a variety of cell types present in the tumours, but most notably in epithelial cells. Targeted cell lines withlacZ in opposite orientation to the direction of HPRT gene transcription also expressed well in epithelial cells, but the targeted cell lines did not express in a wider variety of cell types than some of the nontargeted cell lines. Targeted cell lines transcribinglacZ in the same orientation as HPRT transcription did not express high levels oflacZ in any differentiated cell type. Analysis of transcripts suggested that this orientation effect may have been the result of transcriptional interference perpetrated by the HPRT gene promoter.
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  • 44
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    Journal of applied phycology 5 (1993), S. 175-181 
    ISSN: 1573-5176
    Keywords: decomposition ; Gracilaria ; nitrogen ; nutrients ; temperature ; Ulva
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract This study determined the rate at which nitrogen accumulated in seaweeds is released during decomposition and the effect of temperature on their rates of decomposition and nitrogen release. Gracilaria verrucosa and Ulva lactuca decomposed rapidly in outdoor mesocosms. Ulva, but not Gracilaria, became nitrogen-enriched during decomposition. Maximal weekly rates of nitrogen release were 5.91 ± 2.23 and 6.37 ± 2.59 g N m−2 d−1, respectively for Gracilaria and Ulva. Temperature had a significant effect on the decomposition rate of Gracilaria in a laboratory experiment: decomposition was greater at 30 °C than at 25 °C. No net decomposition was observed at 16 °C. Gracilaria became nitrogen enriched at 30 °C, but not at 16° or 25°. The release of stored nutrients from decaying seaweeds should be included in nutrient budgets and models when seaweed standing stocks are significant. Seaweed source-sink relationships are important ecologically and can be applied to attempts at using seaweeds as environmental monitors of anthropogenic eutrophication and to efforts of cultivating seaweeds for the improvement of water quality.
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  • 45
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    Journal of applied phycology 5 (1993), S. 547-549 
    ISSN: 1573-5176
    Keywords: Trentepohlia odorata ; Dunaliella bardawil ; light intensity ; nitrogen ; growth ; carotenogenesis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract AxenicTrentepohlia odorata was cultured at three different NH4Cl levels (3.5 × 10−2, 3.5 × 10−3, 3.5 × 10−4 M) and three different light intensities (48, 76, 122 µmol m−2 s−1). Chloride had no effect on growth over this range of concentration. High light intensity and high NH4Cl concentration enhanced the specific growth rate. The carotenoid content increased under a combination of high light intensity and low N concentration. WhenD. bardawil was exposed to the same combination of growth conditions, there was an increase in its carotenoid content. The light saturation and the light inhibition constants (K s andK i, respectively) for growth, and the saturation constant (K m) for NH4Cl were determined. TheK s andK i values were higher inT. odorata (66.7 and〉 122 σmol m−2 s−1, respectively) than inD. bardawil (5.1 and 14.7 µmol m−2 s−1, respectively). TheK m value determined at 122 µmol m−2 s−1, however, was lower inT. odorata (0.048 µM) than inD. bardawil (0.062 µM).
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  • 46
    ISSN: 1573-5176
    Keywords: agar ; C:N ratio ; chemostat ; Gelidium ; nitrogen ; phycobiliproteins
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Gelidium sesquipedale is the most important raw material used for extraction of agar in Spain. Based on chemostats, a system of culture for macroalgae with a continuous flow of culture medium has been developed. A stressed morphotype from the South of Spain was cultured, and the effects of different rates of NO 3 − flow on growth and internal constituents were investigated in the laboratory. Cultivation was successful after optimizing factors affecting growth, such as irradiance level, renewal rate and water movement. Mass production was dependent on N supply. With a flow of 35 μmol NO3 − g−1 DW d−1, optimal values of growth (2.1% d−1) and biomass yield were obtained. In these conditions, biomass yield resembled the values observed in natural populations (about 500 g DW m−2 y−1). When the flow of N was reduced to 15 μmol NO 3 − g−1 DW d−1, growth rate and biomass yield were reduced three-fold, and were null when N was supplied as 7 μmol NO 3 − g−1 DW d−1. C:N ratio was an index of the physiological status of the tissue, remaining low when N was sufficient and raised to critical values when N supply was limited. Phycobiliproteins, kept at a constant irradiance level, were affected by N supply, acting as an internal nitrogen reserve, unlike chlorophylla. An effective phycobiliprotein synthesis took place when the flow of N was sufficient. Agar yield, on dry weight basis, was similar as a function of N flow, whereas agar yield of the culture was higher when N was sufficient as a result of growth not being limited by N. This system of culture, commonly used in microalgal studies, may have an important use in macroalgae as a system to obtain biomass of high quality as well as a good tool for physiological studies in conditions of continuous and controlled flow of nutrients.
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  • 47
    ISSN: 1573-4927
    Keywords: muscle protein degradation ; calpain ; gene expression ; genetic variation ; Japanese quail
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Abstract Calpain activity was determined by western blot analysis of steady-state concentrations ofm-calpain (calpain requiring millimolar Ca2 for activation) and also by northern blot analysis of steady-state concentrations of mRNA encodingm-calpain in three lines of quail: a random-bred control line (RR) and two lines selected for body weight, one for increased body weight (LL) and another for decreased body weight (SS). Them-calpain activities in skeletal muscle were higher in the SS line and lower in the LL line. From western blot analysis, enzyme levels of calpain were almost the same for all three lines. At the level of gene expression, the mRNA concentration encodingm-calpain was higher in the LL and lower in the SS line. These results suggest that the regulation of calpain activity in skeletal muscle is a three-step process, regulation at the transcription level, regulation at the enzyme level, and regulation of the activation of calpain.
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  • 48
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    Plant and soil 152 (1993), S. 19-23 
    ISSN: 1573-5036
    Keywords: acetylene reduction ; difference method ; legumes ; 15N isotope method ; nitrogen ; nitrogen fixation ; Rhizobium
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract To assure proper management and fully realize the benefits of the legume-Rhizobium symbiosis it is necessary to be able to quantify the amount of nitrogen fixed. Having measured the effectiveness of atmospheric N2 fixation the macro- or micro-symbionts as well as agronomic factors can be manipulated with the objective to maximize biological nitrogen fixation. A suitable method to quantify nitrogen fixation is therefore necessary in any programme aiming at increasing N2 fixation, like the one being reported in this volume. There are several methods available to quantify nitrogen fixation and most of the commonly used ones are described in the present paper listing their advantages and disadvantages.
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  • 49
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    Plant and soil 155-156 (1993), S. 57-66 
    ISSN: 1573-5036
    Keywords: nitrogen ; wheat ; simulation ; yield-response curve
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Models of the yield responses of crops to applied nutrients are a recent addition to the methods available for making fertilizer recommendations. They have a place in integrating nutrient information with information on other factors which affect yield and its response to added nutrients. This review deals with nitrogen models classified into three groups: those which predict yield-response curves based on empirical factors; those which simulate the yield response from complex simulation models of many processes regulating crop growth and the soil environment; and those which aim to simulate yield and selected processes based on simplified functional relationships which apply to a target region or industry. Three case studies representing the three classes of model are drawn from research on dryland wheat in different parts of Australia. They show examples in which models provide information which is unobtainable from experimental procedures and which provide information useful to farmers in making decisions about fertilizers. Suggestions are made for future developments in crop-nutrient modelling including further comparisons of models, linkage of models with tissue tests, modelling co-limiting nutrients, deciding on the appropriate level of detail within a model and the need for methods for calibrating and testing models on attributes other than yield alone.
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  • 50
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    Plant and soil 157 (1993), S. 167-174 
    ISSN: 1573-5036
    Keywords: extraction ; mineralisation ; nitrogen ; potassium chloride ; uptake
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The mineral nitrogen extractable from 12 Scottish arable soils by boiling for 1 hour with 1 M KCl solution was compared with the quantities taken up by ryegrass, barley and oats in pot tests. High correlations were obtained for ryegrass and oats (r2=0.85 and 0.79, respectively), with a slightly lower correlation (r2=0.64) for barley. When the results for one anomalous soil were eliminated from the analysis, all r2 values were 0.81 or higher. The results confirmed earlier work indicating that this method may prove useful for predicting crop uptake of soil-derived nitrogen.
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  • 51
    ISSN: 1573-5036
    Keywords: fructans ; NIR ; nitrogen ; non-structural carbohydrates ; rice ; starch ; stress ; wheat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Plant shoot samples are frequently analysed to assess if crops require additional nitrogen or mineral elements to maintain satisfactory growth. If plant growth is limited by temperature, water stress, disease, lodging or a mineral deficiency, non-structural carbohydrates (NSC) may be accumulated in, or depleted from, tissues especially those in the lower stems. Plant testing laboratories do not routinely analyse NSC to assist in the identification of plant stress probably because skilled technicians and time are required for the wet chemical determination. In this paper we report that routine determination of NSC is possible using near-infrared reflectance spectroscopy; the errors of determination are comparable with traditional chemical methods. The concentration of NSC in the shoots of rice grown in south eastern Australia ranges from 1.6 to 22.8%, as starch. In the shoots of wheat grown in eastern Australia the range is from 2.4 to 35.2%, as fructans. In both crops the NSC content is highly inversely correlated with the shoot nitrogen content. Based on data from commercial wheat and rice crops we suggest that the ratio between nitrogen and NSC can be used to identify crops in which growth has been limited by a stress other than nitrogen and so are unlikely to show the predicted response to an application of nitrogen fertilizer.
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  • 52
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    Plant and soil 155-156 (1993), S. 45-55 
    ISSN: 1573-5036
    Keywords: compartmentation ; cytoplasm ; 39K NMR ; maize ; nitrogen ; 14N NMR ; 15N NMR ; pea ; phosphorus ; potassium ; 31P NMR ; vacuole
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The cytoplasmic and vacuolar pools of ammonium, inorganic phosphate and potassium can be studied non-invasively in plant tissues using high resolution nuclear magnetic resonance spectroscopy. The techniques that allow these pools to be discriminated in vivo are described and their application to plants is reviewed with reference to the phosphorus, nitrogen and potassium nutrition of root tissues.
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  • 53
    ISSN: 1573-5036
    Keywords: amino acid ; nitrogen ; phloem sap ; phosphorylation ; protein ; rice (Oryza sativa L.)
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Pure phloem sap was collected from insects feeding on rice (Oryza sativa L.) leaves by a laser technique similar to the aphid stylet technique. Rapid circulation of nitrogen in the sieve tubes was demonstrated directly using 15N as a tracer. Application to the roots of the metabolic inhibitors of amino acids, aminooxyacetate and methioninesulfoximine, changed the amino acid composition in the sieve tubes. Feeding methionine to leaf tips resulted in its bulk transfer into the sieve tubes. In vitro experiments confirmed the existence of protein kinases in the pure rice phloem sap. The phosphorylation status of the sieve tube sap proteins was affected by the light regime. The possibility that changes in chemical composition or protein modification such as phosphorylation in the sieve tubes might affect plant growth are discussed. Analysis of pure phloem sap collected from rice plants by insect laser technique has shown dynamic changes in the chemical composition and the quality of proteins in the sap.
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  • 54
    ISSN: 1573-5036
    Keywords: critical concentration ; magnesium ; manganese ; nitrogen ; phosphorus ; potassium ; solution culture ; zinc
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Solution culture was used to characterise deficiencies or toxicities of several essential elements in Ipomoea batatas cv. Wanmun, and to define the critical concentrations of these elements in young mature leaves during vegetative growth. Tentative critical concentrations for deficiency, expressed on the basis of dry weight of leaf blade, were: nitrogen 3.8%, phosphorus 0.17%, potassium 2.4%, magnesium 0.12%, manganese 20μg/g and zinc 10μg/g. For manganese and zinc toxicities it was possible only to designate the range within which the critical concentration occurred. Visible symptoms are briefly described.
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  • 55
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    Plant and soil 155-156 (1993), S. 21-31 
    ISSN: 1573-5036
    Keywords: nitrogen ; sulphur-nutrition ; gene cloning ; gene expression ; regulation ; crop improvement
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract In the last decade, understanding of ion transport has grown sufficiently to pose sensible questions about the molecular nature of the processes and their regulation. Techniques for identifying and cloning genes and for genetic transformation provide the means for answering these questions. Transport of ions across membranes is obviously a major aspect of mineral nutrition since it occurs during initial absorption, compartmentation and mobilisation of nutrients. Here, we will briefly review the types of transport protein involved and show how molecular biology and recombinant DNA technology have revealed something of their structure. Strategies used to identify the genes for transporters are discussed and reference is made to areas in which the availability of cloned genes will facilitate future studies. Mineral nutrition involves, however, more than membrane transport. The absorption rates of major nutrients are quite strictly regulated by biochemical factors which vary with the rate at which nutrients are used in growth. Nitrogen, sulphur and phosphate nutrition in micro-organisms are regulated by the interaction of various DNA-binding proteins with the promoter regions of genes for key enzymes in the assimilatory pathways and the specific ion permeases. The expression of the regulatory protein or its activity can be modified by metabolites, such as glutamine. Some evidence supports the idea that higher plants also have groups of genes with a common regulation of expression. An attempt is made to identify some reasonable objectives, which should increase understanding of the regulation of nutrient transport.
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  • 56
    ISSN: 1573-5060
    Keywords: Zea mays ; glutathione-S-transferase ; glutathione ; herbicide tolerance ; gene expression
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Summary Crop improvement for tolerance to specific herbicides is an important breeding target, since molecules performing well with regard to environmental safety are frequently not completely selective for crops. The glutathione (GSH)/glutathione-S-transferase (GST) system is a general mechanism of detoxification that in higher plants may confer tolerance to some herbicides. GSH level and GST activity were measured in different maize inbred lines, in the absence or in the presence of EPTC (a thiocarbamate) and of Alachlor (a chloroacetanilide); a wide genetic variability was observed for these parameters, which appear to be involved in plant tolerance to herbicides. Isozyme analysis was performed on roots, leaves, scutellum, pollen, coleoptile, mesocotyl of the same inbreds: it revealed the presence of many GST forms in maize, showing high polymorphism; they are controlled by at least five genes, the expression of which is developmentally regulated in the different tissues analyzed.
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  • 57
    ISSN: 1573-5060
    Keywords: gene expression ; isozymes ; patatin ; potato dihaploids ; Solanum phureja
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Summary The expression of leaf isozymes and tuber patatin in dihaploids derived from the Solanum tuberosum cv. Pentland Crown was investigated. Seven of the dihaploids were aneusomatic containing additional chromosomes from the S. phureja dihaploid inducer. Of these, four genotypes expressed leaf isozymes characteristic of the S. phureja dihaploid inducer, and the tubers of three aneusomatic dihaploids contained a S. phureja form of patatin. Aneusomatic dihaploids in which the proportion of cells containing additional S. phureja chromosomes was relatively small (i.e. 1–15%) did not express leaf isozyme markers or patatin bands characteristic of the dihaploid inducer or showed only faint expression of one or two markers. However, those with a high proportion of cells containing additional chromosomes (50–55%) had a range of strongly expressed leaf isozymes that were characteristic of the dihaploid inducer and also expressed the S. phureja tuber patatin. One dihaploid genotype was exclusively euploid (2n〈24), yet is expressed a S. phureja leaf isozyme marker and S. phureja tuber patatin, suggesting recombination or chromosome substitution between the genome of the S. phureja dihaploid inducer and the cultivar Pentland Crown.
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  • 58
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    Photosynthesis research 36 (1993), S. 95-102 
    ISSN: 1573-5079
    Keywords: chloroplast genome ; electron transport ; evolution ; gene expression ; redox response regulators ; redox sensors
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Two-component regulatory systems that respond to changes in redox potential have recently been discovered in bacteria. ‘Redox sensors’ are defined as electron carriers which initiate control of gene expression upon oxidation or reduction. ‘Redox response regulators’ are defined as DNA-binding proteins which modify gene expression as a result of the action of redox sensors. Redox sensors and redox response regulators may comprise a mechanism for feedback control of redox potential in photosynthetic electron transport chains, thereby protecting plants, algae and photosynthetic bacteria from damage caused by electrochemistry operating on inappropriate electron donors and acceptors. Chloroplast redox sensors and redox response regulators, themselves encoded in the nucleus, may place chloroplast gene expression under redox regulatory control. This may account for the persistence, in evolution, of chloroplast genomes, and for the constancy of the sub-set of chloroplast proteins encoded and synthesised in situ. These and other predictions are discussed.
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  • 59
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    Plant and soil 152 (1993), S. 255-260 
    ISSN: 1573-5036
    Keywords: crimson clover ; field labeling ; legume ; nitrogen ; 15N ; variability
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Plant material labeled with 15N is often used to determine recovery of N from green manure crops by subsequent crops. In this study, 15N enriched crimson clover (Trifolium incarnatum L.) was grown at a field site where it was to be utilized in a subsequent experiment. A foliar spray of (NH4)2SO4 (99 atom % excess 15N) was applied to a 1.2 m × 8.8 m plot of crimson clover at a rate of 10 kg N ha−1 in early March 1990, immediately prior to the period of rapid vegetative growth. Clover shoots harvested in April contained 1.72 atom % excess 15N. Total N concentration of enriched clover was similar to that in adjacent untreated clover. Clover shoots contained 20% of the applied 15N, and an additional 27% was recovered from the surface soil horizon (0 to 15 cm). A gradient was observed across the plot, with clover enrichment increasing from 1.3 to 2.2 atom % excess 15N. Recovery of applied 15N in soil was highest in the subplots with lowest clover enrichment. Variability in 15N enrichment was also observed among plant parts: leaves from the basal half of shoots had 2.2 atom % excess 15N; while leaves from the terminal half of shoots, terminal stems, and basal stems had between 1.1 and 1.4 atom % excess 15N.
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  • 60
    ISSN: 1573-5036
    Keywords: allocation ; carbon ; nitrogen
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract In this paper we model allocation of carbon and nitrogen to roots and leaves as a function of the nitrogen status of a plant. Under steady-state conditions, allocation of carbon and nitrogen to leaves is exponentially (positively) correlated with plant nitrogen concentration, whereas allocation to roots is correlated negatively, also in an exponential manner. Allocation functions derived under steady-state conditions are used to simulate biomass partitioning under non-steady-state nutrient conditions. Upon nitrogen deprivation, measured and simulated values are rather similar with time, suggesting that allocation functions derived under steady-state conditions also hold under non-steady-state conditions.
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  • 61
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    Plant and soil 155-156 (1993), S. 387-390 
    ISSN: 1573-5036
    Keywords: Brassica napus L. ; canola ; critical concentrations ; nitrate ; nitrogen ; sowing time
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Critical concentrations of NO3-N in fresh petiole tissue and total N in the dried lamina were determined for the youngest mature leaf (YML) of field-grown canola. For dry matter yield of canola sown on 4 May, critical NO3-N concentration in the YML petiole at the rosette stage (RS) was 1.46 mg/g fresh wt. At the flower-buds-visible stage (BV) it was 0.45 mg/g fresh wt. For seed yield the values were 1.72 and 0.53 mg/g fresh wt. Critical total N concentration in the YML lamina for dry matter yield were 69 mg/g dry wt. at RS and 57 at BV. For seed yield they were 71 and 59 mg/g dry wt. Critical NO3-N concentrations in the YML petiole of canola sown on 30 May were reduced by 50%; critical total-N concentrations in the YML lamina were not reduced to the same extent. Despite the reductions in critical N concentrations in the YML, critical N fertilizer rates for vegetative growth and seed yield were unaffected by sowing date or plant growth stage.
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  • 62
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    Plant and soil 153 (1993), S. 255-263 
    ISSN: 1573-5036
    Keywords: acid soil ; chlorosis ; iron deficiency ; nitrogen ; Pinus sylvestris
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Scots pine (Pinus sylvestris L.) trees growing on acidic soils may show a special type of chlorosis. The current needles are yellowish and the discolouration is most pronounced at the needle base. The disease bears resemblance to iron chlorosis in trees on calcareous soils. In order to investigate the cause of the chlorosis, needle and soil samples were collected in 41 stands in the southern, central and eastern parts of the Netherlands. Needles of the chlorotic trees had low levels of chlorophylls and carotenoids and high ratios of carotenoids to chlorophylls and of chlorophyll a to chlorophyll b. These symptoms occur in plants suffering from iron deficiency. The current needles of chlorotic trees contained on average 14 mg kg−1 Fe, whereas unaffected trees from the same stands contained 24 mg kg−1. Healthy trees from stands without chlorotic trees had needle iron levels of 29 mg kg−1. Spraying the needles of chlorotic trees with ferric-EDTA containing solutions resulted in partly regreening within a few weeks. Chlorotic needles showed also high nitrogen and cadmium levels. Soils of chlorotic stands contained large amounts of extractable inorganic nitrogen and phosphorus. The possible causal relationships between the observed iron deficiency and the differences in elemental composition of needles and soils are discussed.
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  • 63
    ISSN: 1573-5036
    Keywords: farming system ; fertilization ; magnesium ; nitrogen ; potassium ; potato ; proteolytic enzymes ; senescence ; Solanum tuberosum L.
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The influence of fertilization on senescence and nutrient remobilization in potato leaves was investigated in two farming systems on a soil with a poor potassium availability. The ‘Conventional’ farming system followed good local practices including industrial products, while in the ‘Bio-Dynamic’ farming system industrial fertilizers and synthetic pesticides were avoided. Potassium concentrations in the dry matter of mature leaves varied over a wide range. Nitrogen compounds (protein, chlorophyll) were less affected, and phosphorus concentrations in the dry matter were similar. Magnesium and potassium concentrations in the leaves were negatively correlated. In both farming systems senescence was advanced in plants with a low nutrient supply. Alkaline pyrophosphatase and aminopeptidase activities (in general highest in expanding and mature leaves) were lower and endopeptidase activities peaked earlier on plots with low fertilizer levels. A high percentage of potassium was remobilized from senescing leaves on unfertilized plots, but the phosphorus concentration remained high at the end of the season. The results suggest that the differential net remobilization of nitrogen, phosphorus and potassium depended on actual source/sink relations in the plants.
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  • 64
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    Plant and soil 157 (1993), S. 175-184 
    ISSN: 1573-5036
    Keywords: barley ; extraction ; malting quality ; mineralisation ; nitrogen ; 15N-labelling ; potassium chloride ; uptake
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The potentially mineralisable nitrogen extracted from 10 soils by two methods involving boiling with dilute KCl were compared with the actual uptake of soil N by spring barley in the field, as determined with the use of 15N-labelled fertiliser. Generally good correlations were found for those soils which had previously been cropped with cereals (defined in Great Britain as either ‘N-Index zero’, or ‘low nitrogen status’ soils, for fertiliser recommendations), with the results obtained by the more severe of the two methods being somewhat better than by the other method. When organic matter content was also taken into account, correlations were improved. Mineral nitrogen in the soil at sowing was highly correlated with potentially mineralisable nitrogen, and with uptake, but this relationship did not hold for soil samples taken in January, well before the likely sowing date. This suggested that early measurement of soil mineral nitrogen (when decisions on cropping are normally made) was not a practicable method for determinining spring fertiliser applications, and that the measure of potentially mineralisable nitrogen appeared more promising in this regard.
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  • 65
    ISSN: 1573-5036
    Keywords: decomposition ; fine roots ; lignin ; litterbags ; nitrogen ; polyphenols ; substrate quality ; trees ; tropical montane rain forest
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Decomposition rates, initial chemical composition, and the relationship between initial chemistry and mass loss of fine roots and foliage were determined for two woody tropical species, Prestoea montana and Dacryodes excelsa, over a gradient of sites in two watersheds in the Luquillo Experimental Forest, Puerto Rico. At all locations, fine roots decayed significantly more slowly than foliage during the initial 6 months. Substrate quality of the initial tissue showed marked differences between roots and foliage when using cell wall chemistry, secondary chemistry and total elemental analysis as indices. Quantity of acid detergent fiber (ADF) (non-digestible cell wall fiber) and lignin content were higher for roots than leaves: D. excelsa roots had 55.3% ADF and 28.7% lignin while leaves had 36.2% ADF and 11.8% lignin; P. montana roots had 68.0% ADF and 26.8% lignin while leaves had 48.5% ADF and 16.1% lignin. Aluminum concentrations were higher in fine roots (843 mg kg−1 in D. excelsa, 1500 mg kg−1 in P. montana) than leaves (244 mg kg−1 in D. excelsa, 422 mg kg−1 in P. montana), while calcium concentrations were higher in foliage (5.5 mg g−1 in D. excelsa, 7.8 mg g−1 in P. montana) than roots (3.4 mg g−1 in D. excelsa, 3.1 mg g−1 in P. montana). Nitrogen did not show any trend with tissue or species type. A linear model between mass remaining after 6 months and initial tissue chemistry could be developed only for calcium (r2=0.64).
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  • 66
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    Plant and soil 149 (1993), S. 175-184 
    ISSN: 1573-5036
    Keywords: compaction ; Helianthus annuus L. ; leaf expansion ; nitrogen ; osmotic potential ; photosynthesis ; root growth ; soil strength ; turgor ; water potential
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Leaf expansion and growth response of sunflower (Helianthus annuus, L.) to soil compaction were investigated in relation to compaction effects on water relations, nitrogen nutrition, and photosynthesis. A series of field experiments were conducted with plants grown in 20 cm-diameter cylinders with soil bulk densities ranging from 1.2 to 1.7 g cm−3 at the 0–20 cm depth (equivalent to 0.8 to 2.4 MPa soil strength measured with a soil penetrometer). Relative leaf expansion rate (RLER) decreased linearly with increasing soil strength. Smaller plant size in compacted treatments was due not only to slower expansion rates, but also smaller maximum size of individual leaves. Sensitivity of leaf expansion to soil strength was best illustrated by a reduction in RLER and maximum size of the first leaf to emerge in a treatment with only the lower 10–20 cm of the profile compacted (bulk density of 1.7 g cm−3). Root growth was less affected than shoot growth by compaction and root:shoot ratios of compacted treatments were significantly higher than the control. Soil compaction had no significant effect on pre-dawn or midday leaf water potential, osmotic potential or leaf turgor. Specific leaf weight was usually higher in plants grown on compacted soil, and leaf nitrogen and photosynthesis per unit leaf area were either unaffected by treatment or significantly higher in compacted treatments. The results suggest that early growth reduction of sunflower plants grown on compacted soil was more sink- than source-limited with regard to water, nitrogen, and carbon supply. Further evaluation of this hypothesis will require verification that these whole-leaf measurements provided a sufficiently accurate approximation of treatment effects on the dynamic equilibria of expanding cells.
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    Plant and soil 153 (1993), S. 287-293 
    ISSN: 1573-5036
    Keywords: grain protein concentration ; grain yield ; nitrogen ; tritordeum ; triticale ; wheat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The new species of cereal × Tritordeum Ascherson et Graebner (Hordeum chilense Roem. et Shultz × Triticum ssp.) has a grain protein concentration (GPC) of up to 25%. The relationship between GPC and yield, and the factors responsible for the high GPC of tritordeum were examined and compared in field experiments. Three experimental tritordeum lines, two early and a later released (recombined and secondary tritordeums) were compared to wheat (cv. Cajeme) and triticale cultivars (cv. Trujillo). GPC's were 19%–22% for recombined tritordeums, 16% for the secondary tritordeum, 12–15% for wheats and 11% for triticale. Grain yields of the recombined and secondary tridordeum were 17–33% and 45–57% that of the wheats and triticale, respectively. Reducing grain sink size by spikelet removal resulted in an increased GPC of remaining grains. Considering all species together there were a strong inverse relationship between GPC and grain yield (GY) per main ear (GPC=26−4.76 ln GY; r2=0.82). In another experiment, frost damage to an early sown treatment of wheat reduced sink size. Harvest index (HI) of early sown wheat was reduced from 0.45 to 0.19, values comparable to that of tritordeum. Having similar HI, the GPC of the early sown wheat was the same as an early sown tritordeum (around 18%). Data for total N uptake and the N concentration of plant tissue during the growing season indicated that enhanced N uptake and remobilisation were not responsible for tritordeum's high GPC. These results suggest that the high GPC of the early lines of tritordeum is a consequence of the small grain yield concentrating the grain protein.
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  • 68
    ISSN: 1573-5036
    Keywords: clover ; grass ; leaching ; lysimeter ; nitrogen ; 15N ; nutrient balances ; nutrient uptake ; pasture ; subsoiling ; sulphur ; 35S
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Synthetic cow urine labelled with 35S and 15N was applied to large, undisturbed, monolith lysimeters sampled from subsoiled and non-subsoiled areas of a grass/clover pasture. For one year following the urine application, the lysimeters were subjected to a combination of natural rainfall, simulated rainfall and simulated flood irrigations. Drainage from the lysimeters was sampled regularly and monthly (approx.) pasture cuts taken. At the end of the year, the lysimeters were destructively sampled in 50 mm depth increments for soil analysis. Leachates, plant samples and soil samples were analysed for 35S and 15N. There were no significant differences in plant uptake of 35S and 15N between the subsoiled and nonsubsoiled lysimeters. Initially grass showed a higher degree of labelling than clover. Total amounts of 35S and 15N leached from the subsoiled lysimeters were approximately twice that leached from the nonsubsoiled ones. Leaching patterns differed substantially between the two nutrients. Total recoveries of 35S (in plants, leachates and soil extracts) accounted for 82% of the applied 35S for the subsoiled lysimeters and 72% for non-subsoiled ones. The unrecovered 35S is considered to have been incorporated into soil organic matter. Total recoveries of 15N (in plants, soil and leachates) were similar to those for 35S, but unrecovered 15N is attributed to loss by denitrification.
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  • 69
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    Hydrobiologia 251 (1993), S. 49-58 
    ISSN: 1573-5117
    Keywords: lake littoral ; detritus ; macrophytes ; decomposition ; nitrogen ; phosphorus
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The importance of detritus varies greatly among shore zones of lakes, but in a large majority of these regions detrital pathways prevail. Aside from a great spatial and seasonal variability, macrophytes and bottom sediments appear to be dominant stores of nutrients in these habitats. Macrophytes hold a central position in nutrient cycling in the shore-littoral lake zones. They are the main source of autochthonous detritus as they prevail in the total biomass of littoral organisms, and they are only rarely available as direct food of consumers. Various processes and interactions determine the role of macrophytes in nutrients dynamics. These are: the intensity of nutrient uptake and translocation, release of nutrients by healthy plants and from decomposing plants, exchange of elements between macrophytes and their periphyton, as well as interception of seston by macrophyte stands. Particular plant species differ in their time of dying and susceptibility to decomposition. The changes in decomposing material (size structure of particles and nutrient content) mean that detritus in various stages of decomposition differs in its role in trophic dynamics of shore-littoral lake zones. Several types of shore regions as regards detritus sources and retention level are discussed.
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  • 70
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    Hydrobiologia 251 (1993), S. 65-72 
    ISSN: 1573-5117
    Keywords: Frozen littoral ; frost heave ; nutrient release ; nitrogen ; phosphorus ; calcium
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract In winter, the littoral substrate of ecotonal zones along north Swedish rivers and lakes freezes. Even if the littoral is flooded at freeze-up, the ice freezes solid to the shore substrate due to low temperature combined with a gradual decrease in water level during winter. Frost conditions were studied during an 8-year period along eight littoral transects in the River Vindelälven and adjacent riverside lagoons. Heavy frost heave with formation of needle ice was observed in several places. Nutrient release was suggested to take place due to the frost process. Sediment was taken to a laboratory experiment where samples with sediment and water were kept under unfrozen and frozen conditions during six months. N (total-N) and Ca were significantly released to the water, while P (total-P) did not show any clear movement from the frozen sediment. The results indicate that frost processes in ecotonal zones are involved in the movement of nutrients between sediment and water.
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  • 71
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    Hydrobiologia 251 (1993), S. 95-101 
    ISSN: 1573-5117
    Keywords: Land/stream ecotones ; bank runoff ; aerial drift ; retention ; carbon ; nitrogen ; phosphorus
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The ‘stream’ ecosystem is described as a three-layered system, vertically as well as horizontally. The land/stream ecotone is defined as the area where lotic and edaphic characters overlap at the time of observation. The study site — ‘Oberer Seebach’, near the Biological Station Lunz — and the methods employed are described. Only a surprisingly small fraction (less than 10 %) of total imports is transported across the surface ecotones. The driving variables determining bank runoff and aerial drift are described and discussed. The importance of channel areas which are periodically flooded is stressed.
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  • 72
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    Hydrobiologia 266 (1993), S. 255-265 
    ISSN: 1573-5117
    Keywords: gene expression ; nucleotide sequence ; invertebrate
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Molecular biological tools currently available to us are revolutionizing the way in which we can address questions in evolutionary biology. The purpose of this article is to provide an overview of molecular techniques and applications available to biologists who are interested in evolutionary studies but who have little acquaintance with molecular biology. In evolutionary biology, techniques designed to determine degree of nucleic acid similarity are in common use and will be dealt with first. Another approach, namely gene expression studies, has strong implications for evolutionary biology but generally requires substantial familiarity with molecular biological tools. Expression studies provide powerful tools for discerning processes of speciation, as in the selection of genetic variants, as well as discerning lineages, e.g., expression of specific homeobox genes during segment formation. For investigations where either nucleic acid identity or gene expression are the ultimate goal, detailed information, protocols and appropriate controls are beyond the scope of this work but, where possible, recent review articles are cited.
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  • 73
    ISSN: 1573-5095
    Keywords: eucalypt ; regrowth forest ; litter ; litterfall ; fertilizer ; nitrogen ; nutrient cycling ; phosphorus
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The effects of fertilizer treatment on nutrient transfers to the forest floor were examined in regrowth Eucalyptus diversicolor F. Muell. forest. Dry weight and nutrient content of leaf litterfall and total litterfall were measured for 3 years in a stand to which two levels of N (0, 200 kg ha-1 year-1) were applied each year at each of three levels of a single initial application of P (0, 30, 200 kg ha-1). Annual accessions of litter to the forest floor were significantly increased by additions of both N (by 17%, 18% and 21% in the 3 years) and 200 kg P ha-1 (by 8%, 8% and 4% in the 3 years) but there was no interaction between effects of N and P treatments. Fertilizer application also had a significant effect on the nutrient content of leaf litterfall and total litterfall. Concentration of N in leaf litterfall was 9% to 23% greater on plots treated with N fertilizer compared to untreated plots. The amounts of N in litterfall were about 30% greater on N-treated compared to untreated plots. On plots treated with 200 kg P ha-1, P concentrations in leaf litter were 50% to 100% greater than in litter from plots receiving no P. Application of 200 kg P ha-1 increased the amounts of P in annual litterfall by 32% to 87%. The greatest increase in P accessions occurred soon after fertilizer treatment. The amounts of Ca, K, and Na in litterfall were also significantly increased by fertilizer application. For Ca and K this was due partly to increases in element concentrations in litterfall following application of treatments. The effect of fertilizers on internal recycling of plant nutrients and on litter accumulation and nutrient dynamics in forest floor litter is discussed.
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  • 74
    ISSN: 1573-5117
    Keywords: retention ; core-sampling ; phosphorus ; nitrogen ; resuspension ; export
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract In a Danish lowland river system intensive measurements were made, in four 80 m reaches, of the nitrogen (N) and phosphorus (P) stored in the stream sediment. The results were used for calculation of the total retention in the river system during two summers (June to August). In addition, the mobilization of nutrients from the stream bottom in autumn 1987 was compared with the export from the watershed. During the study period (June 1987 to September 1988) the amounts of N and P stored in stream reaches were determined fortnightly using a core-sample technique. In reaches dominated by submersed macrophytes, 25–40 g N m−2 and 20–30 g P m−2 were stored during two summers, against only 10–15g N and P m−2 for sandy and gravely reaches. In riparian zones with emergent macrophytes the retention was even higher than in the submersed macrophytes. Gross retention exceeded net retention by a factor of two to three. Net retention of P in the river system during the summer of 1987 was equal to the summer export from the watershed. On an annual basis, retention in the summer constituted 20% of the P export. In contrast, retention in the summer of 1988 amounted to 60% of the total P export during the same period (38% reduction) and 22% in comparison with the annual export. The corresponding figures for N were lower, showing reductions of 16% and 12% of the export of total N in the two summer periods, and about 1% of the annual exports. In September 1987 6.4% of the total N export and 65% of the total P export from the watershed consisted of resuspended material. In 1987 the N and P retained during the summer was almost completely resuspended during storm events during September to November.
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  • 75
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    Hydrobiologia 271 (1993), S. 97-108 
    ISSN: 1573-5117
    Keywords: Myriophyllum aquaticum ; parrotfeather ; nitrogen ; phosphorus ; mass flow
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The contribution of sediment interstitial water and the water column to the transpiration stream of Myriophyllum aquaticum (Vellozo) Verdcourt was determined to estimate the significance of mass flow in supply of sediment nutrients for plant growth. Sediment interstitial water accounted for about 2% of the water transpired over a 37 day period. Because of the small volume of water that originated in the sediment we concluded that mass flow did not significantly enhance nutrient supply to the roots of M. aquaticum. Relative growth rate (RGR) of adventitious, water roots was greater than whole plant RGR, and RGR of sediment roots was not significantly different from zero, indicating a shift in the biomass allocation after emergence of the apical meristem into the air. Water use, measured by the transpiration coefficient, averaged 260 ml H2O mg DW-1, which is similar to C-4 terrestrial plants. M. aquaticum has leaf characteristics commonly associated with xerophytic habitats. These characteristics may be necessary if a high transpiration rate and a mechanical requirement for high cell turgor pressure, required by a reliance upon hydrostatic pressure for support of the aerial stems, are mutually exclusive because of morphological constraints on hydraulic conductivity.
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  • 76
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    Hydrobiologia 251 (1993), S. 143-148 
    ISSN: 1573-5117
    Keywords: Danube Delta ; flood zones ; phosphorus ; nitrogen ; eutrophication
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The change of concentration of total reactive phosphorus (TRP) and dissolved inorganic nitrogen (DIN) was studied in the lower Danube river and in selected lakes situated in the wetland area of the Danube Delta. The differences Danube Delta in nutrient concentration in the river waters entering the delta and the delta in different sites (especially lakes) of the wetland area are considered to reflect retention in the system. The highest retention was found in periods of moderate and low water level when the surface-to-volume ratio of the lakes was high. In these periods the in-lake concentration of TRP and DIN could be as low as 11 and 23% of the values found in the inflowing river.
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  • 77
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    Biogeochemistry 22 (1993), S. 157-178 
    ISSN: 1573-515X
    Keywords: Serengeti ; productivity ; precipitation ; nitrogen ; grazing
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    Topics: Chemistry and Pharmacology , Geosciences
    Notes: Abstract In the Serengeti National Park, Tanzania, precipitation and soil nitrogen vary greatly between northwestern tallgrass areas and southeastern shortgrass areas, with the tallgrass having higher total precipitation and lower soil fertility. We used a model of grassland productivity, carbon/nitrogen cycling, and abiotic factors to test the hypothesis that tallgrass productivity is limited primarily by nitrogen availability while shortgrass productivity is limited by water. Under observed grazing intensities and ungrazed conditions, precipitation exerted primary control over grassland productivity for both regions, with differences in soil texture mediating soil water availability to the grasses. Mineral nitrogen availability interacted with water availability to influence productivity at precipitation levels ⩾ 130% of the mean. Nitrogen mineralization and precipitation were positively related for each grassland type, however, nitrification varied both between grassland types and between grazed and ungrazed conditions. Combined mineralization and nitrification could not maintain soil mineral nitrogen levels in the face of plant nitrogen uptake stimulated by increased precipitation, thus providing the mechanism by which nitrogen becomes a secondary limiting factor for both grasslands. Model experiments indicated that the pattern of primary limitation by precipitation and secondary limitation by nitrogen was robust to model assumptions concerning ungulate deposition of urine and dung nitrogen to the soil.
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  • 78
    ISSN: 1573-6881
    Keywords: NADH-quinone oxidoreductase ; Paracoccus denitrificans ; gene cluster ; H+ pump ; gene expression ; FMN ; iron-sulfur cluster
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Physics
    Notes: Abstract A comparison of the mitochondrial NADH-ubiquinone oxidoreductase and the energy-transducing NADH-quinone oxidoreductase (NDH-1) ofParacoccus denitrificans revealed that both systems have similar electron-transfer and energy-transduction pathways. In addition, both complexes are sensitive to the same inhibitors and contain similar electron carriers, suggesting that theParacoccus NDH-1 may serve as a useful model system for the study of the human enzyme complex. The gene cluster encoding theParacoccus NDH-1 has been cloned and sequenced. It is composed of 18,106 base pairs and contains 14 structural genes and six unidentified reading frames (URFs). The structural genes, URFs, and their polypeptides have been characterized. We also discuss nucleotide sequences which are believed to play a role in the regulation of the NDH-1 gene cluster andParacoccus NDH-1 subunits which may contain the binding sites of substrates and/or electron carriers.
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  • 79
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    Nutrient cycling in agroecosystems 36 (1993), S. 79-90 
    ISSN: 1573-0867
    Keywords: agriculture ; Sahel ; Sudan ; Mali ; cotton ; fertilization ; nutrient ; soil ; soil degradation ; depletion ; nutrient ; nutrient balance ; nitrogen ; phosphorus ; potassium ; calcium ; magnesium ; acidification ; sustainability
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The degree of soil mining by agricultural production in Southern Mali is assessed by calculating nutrient balances: differences between the amount of plant nutrients exported from the cultivated fields, and those added to the fields. Export processes include extraction by crops, losses due to leaching, to erosion, and to volatilization and denitrification. Inputs include applications of fertilizer and manure, restitution of crop residues, nitrogen fixation, atmospheric deposition of nutrients in rain and dust, and enrichment by weathering of soil minerals. Nutrient balances are calculated for N, P, K, Ca, and Mg. Both pessimistic and optimistic estimates are given. The resulting figures indicate, even when the most optimistic estimates are used, large deficits for nitrogen, potassium and magnesium. For the region as a whole, the calculated deficits are -25 kg N/ha,-20 kg K/ha, and -5 kg Mg/ha. Further, acidification is to be expected, in particular in areas where cotton is grown. The deficits are caused by traditional cereal crops, but also by cotton and especially by groundnut. The latter two crops are fertilized, but insufficiently. It is important to note, that the negative figures are not automatic recommendations for application of a specific amount of additional fertilizer. For phosphorus and calcium the balance of the region as a whole appears to be about in equilibrium, but locally large variations may occur. Erosion and denitrification are important causes of nutrient loss, accounting respectively for 17 and 22% of total nitrogen exports. Atmospheric deposition and weathering of minerals in the soil are still important nutrient inputs that contribute as much as nutrients as organic and mineral fertilizer combined. Nutrient depletion is very large in comparison to the amount of fertilizer applied. Drastic options, such as doubling the application of fertilizer or manure, or halving erosion losses, even if feasible, would still not be enough to make up for the calculated deficits. The annual value of withdrawn nutrients, if related to prices of fertilizers, varies between 10,000 and 15,000 FCFA/ha (40-60 US $/ha). Since the estimated average gross margin from farming in this area is 34,000 FCFA/ha (123 US $/ha), soil mining appears to provide an amount equal to 40% of farmers' total income from agricultural activities.
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    Nutrient cycling in agroecosystems 34 (1993), S. 59-65 
    ISSN: 1573-0867
    Keywords: Barley ; environment ; nitrogen ; seeding rate ; yield ; yield components
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract This study was conducted to determine the effects of rainfall and temperature during the growing season, seed rate, and N rate on grain yield and yield components of winter barley (Hordeum vulgare L.) on a Typic Haploxeralf soil in Santa Olalla (Toledo), Spain in 1986/7, 1987/8, and 1988/9. Two experiments were conducted each year using the 6-rowed variety ‘Barbarrosa’ and the 2-rowed variety ‘Reinette’. Both experiments used seed rates of 80, 160, and 240 kg ha−1 as whole plot treatments, and N rates of 0, 40, 80, 120, and 160 kg ha−1 as subplots. Responses to N depended on both the quantity and distribution of rainfall during the growing season, and temperature during grain fill. In the high rainfall, moderate grain-fill temperature year, increasing the N rate from 0 to 160 kg ha−1 increased grain yields (by 2.3 t ha−1), straw yields and the harvest index while maintaining the kernel weight for both varieties. In the low rainfall, high grain-fill temperature year, N rate had little influence on grain yield, but increased the straw yield, which reduced the harvest index, and also decreased kernel weight. Seed rate had no influence on grain yields even though wide variation in N rates, rainfall and temperatures occurred in the three-year study. Results from this study indicated that strategies to reduce (or avoid) water/high temperature stress during grain fill are necessary to assure more uniform yield responses to N application across years. However, decisions about seed rate can be made independently for conditions similar to those in this study.
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  • 81
    ISSN: 1573-0603
    Keywords: vaccinia virus ; orthopox virus ; recombination ; gene expression
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary A basic technique is described for inserting any foreign gene into poxvirus by in vitro recombination. Also described is a method for identifying and plaque-purifying recombinant poxvirus containing the foreign gene using nitrocellulose filters and DNA hybridization. Immunologic techniques are presented for analyzing expression of the foreign gene, either on the surface membrane or inside infected cells.
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  • 82
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    Agroforestry systems 21 (1993), S. 1-10 
    ISSN: 1572-9680
    Keywords: silvo-pasture ; compaction ; cattle traffic ; penetrometer ; bulk density ; nitrogen ; seedlings
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract This paper reports on the extent of soil compaction due to cattle traffic around hardwood and softwood tree seedlings established in existing pasture, and subject to cattle pressure. A higher soil penetrometer resistance in the grazed areas pointed to a significant change in soil structure (i.e. dry bulk density) as a result of cattle traffic in the area. In a related experiment comparing the effect of three different levels of soil compaction on tree seedling growth and nitrogen cycling it was found that water infiltration and nitrogen uptake were reduced in soils treated with a medium and high level of compactive effort. This resulted in a slower rate of growth of the tree seedlings. The addition of an additional nitrogen source improved seedling growth in both the medium and high density compactive treatments.
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  • 83
    ISSN: 1572-9699
    Keywords: survival ; starvation ; stress ; Vibrio ; carbon ; nitrogen ; phosphorus ; protein synthesis ; carbon starvation stimulon
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Non-differentiating bacteria adapt to starvation induced growth arrest by a complex turn-on/turn-off pattern of protein synthesis. This response shows distinct similarities with those of spore formation in differentiating organisms. A substantial amount of information on the non-growth biology of non-differentiating bacteria can be derived from studies onVibrio strains. One important result is that carbon rather than nitrogen or phosphorus starvation leads to the development of a starvation and stress resistant cell in these organisms. Hence, we have attempted to characterize the carbon starvation stimulon. By the use of two-dimensional gel electrophoresis of pulse-labelled cells and transposon mutagenesis, using reporter gene constructs, the identity and function of some members of the carbon starvation stimulon have been elucidated. Moreover, regulatory genes of the starvation response have been identified with these techniques. Current studies primarily address the identity and function of these genes. The role of transcript modification and stability for both long term persistence during starvation as well as the efficient recovery of cells which occurs upon nutrient addition is also addressed. It is suggested that an understanding of the functionality of the translational machinery is essential for the understanding of these adaptive pathways. This contribution also discusses the diversity of the differentiation-like response to starvation in different bacteria and whether a general starvation induced programme exists.
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  • 84
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    Biodegradation 20 (1993), S. 195-212 
    ISSN: 1572-9729
    Keywords: denitrification ; lake ; mass balance ; nitrogen
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Energy, Environment Protection, Nuclear Power Engineering , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Nitrogen mass balances for seven unproductive lakes and 20 forested catchments in central Ontario were measured between 1977 and 1989. Average annual lake denitrification rates calculated with the N/P ratio method were strongly correlated with summer anoxic factor (extent of surficial sediment anoxia) whereas denitrification rates calculated with a210Pb sediment N accumulation method were poorly correlated with the anoxic factor suggesting that the N/P method is superior. Substantial denitrification occurred in all lakes — an average of 36% of TN inputs or 75% of the net gain. On a regional area-weighted basis, 67% of bulk atmospheric TN deposition was stored or denitrified terrestrially, 12% was denitrified in lakes, 4% was stored in lake sediments, and 17% was exported from lakes. N/P ratios were generally less in streams than in precipitation suggesting preferential N retention in catchments, whereas the N/P ratios in lake outputs were slightly higher than lake input ratios, suggesting preferential P retention in lakes. This is consistent with the notion that P-limited lakes can exist adjacent to N-limited forests.
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  • 85
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    Plasma chemistry and plasma processing 13 (1993), S. 613-632 
    ISSN: 1572-8986
    Keywords: Aluminum nitride ; aluminum ; nitrogen ; hydrogen ; ammonia ; thermal plasma ; transferred plasma ; emission spectroscopy ; sintering ; ultrafine powder ; nanophase ; composite
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology , Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics , Technology
    Notes: Abstract Ultrafine particles of aluminum tnitride (AIN) arc produced by a transferred an plasma. Two devices are used: a transferred arc plasma on aluminum natal in nitrogen or nitrogenlammonia atmospheres, and a item concept of transferred arc plasma when, DC anode and cathode ares are coupled together above an alumintun melt. Equilibrium chemical compositions mere calculated. The temperature distributions in the plasma are measured hr emission spectroscopy Flit, powder, made from 99.8%, aluminum ingot, it as analyzed and confirmed to be 99.3%, of hexagonal phase aluminum nitride. In othertests, from 99.99% aluminum ingot, a translucent AIN vinter was obtained. The densification behavior was assessed by hot pressing and by pressureless sintering, with and without additives. The thermal conductivities are given.
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    International journal of thermophysics 14 (1993), S. 699-725 
    ISSN: 1572-9567
    Keywords: argon ; caloric properties ; density ; equation of state ; Helmholtz function ; methane ; nitrogen
    Source: Springer Online Journal Archives 1860-2000
    Topics: Physics
    Notes: Abstract In order to describe the thermodynamic behavior of methane, argon, and nitrogen in the so-called “natural-gas region,” namely, from 270 to 350 K at pressures up to 30 MPa as accurate as possible with equations of a very simple form, new equations of state for these three substances have been developed. These equations are in the form of a fundamental equation in the dimensionless Helmholtz energy; for calculating the pressure or the density, the corresponding equations explicit in pressure are also given. The residual parts of the Helmholtz function representing the behavior of the real gas contain 12 fitted coefficients for methane, 8 for argon, and 7 for nitrogen. The thermodynamic relations between the Helmholtz energy and the most important thermodynamic properties and the needed derivatives of the equations are explicitly given; to assist the user there is also a table with values for computer-program verification. The uncertainties when calculating the density ρ, the speed of sound w, the isobaric specific heat capacity c p, and the isochoric specific heat capacity c v are estimated as follows. For all three substances it is Δρ/ρ≤±0.02 % for p≤ 12 MPa and Δρ/ρ ≤ ±0.05% for higher pressures. For methane it is Δw/w≤±0.02% for p≤10 MPa and Δw/w≤+-0.1% for higher pressures; for argon it is Δw/w≲-0.1 % for p≤ 7 MPa, Δw/w≤±0.3 % for 7 〈p≤30 MPa; and for nitrogen it is Δw/w≤±0.1% for p≤1.5 MPa and Δw/w±0.5% for higher pressures. For all three substances it is Δc p/c p≤±1 % and ΔC v/C v≤±1 % in the entire range.
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    Hydrobiologia 251 (1993), S. 199-209 
    ISSN: 1573-5117
    Keywords: spring ; karst ; interstitial aquifer ; nitrogen ; carbon ; organic matter retention
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The flow of groundwater through the sediment layer (underflow or hyporheic zone) of streams and at the origin of streams can influence organic matter uptake dynamics of floodplain. The River Rhône floodplain has limestone foothills. Here we studied 2 karstic and 2 interstitial springs differing by aquifer geology. Organic matter, physico-chemical conditions were compared between these springs during two seasons (from March to September 1989) and at different depths (0, −20 cm, −40 cm). Temperatures indicated large differences in underflow between springs, in their relation to the surrounding environment, and between seasons. Springs are well oxygenated, with differences between layers. Cultivated fields supply interstitial springs with nitrates, and pools are nutrient traps. DOC was heterogeneous in space and time and correlates with VFPOC. Particulate nutrients were correlated with available surface area of sediment grains. Physical conditions of each spring were prominent in determining storage and turnover of organic matter. Each spring, by its own characteristics and dynamics regulating stability and turnover, had an effect or control on storage, transport and retention of organic matter (quality, quantity). These springs offer an example of the heterogeneity, and give a view of the diversity of patches within a floodplain. The data suggest that groundwater flow of springs may be a major factor in the functioning of floodplain tributaries.
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  • 88
    ISSN: 1573-5117
    Keywords: land drainage ; nitrogen ; phosphorus ; areal coefficients ; agricultural streams ; riparian ecotones
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract During the 19th and the first half of the 20th century, approximately 300 km2 of lakes and wetlands, representing 29% of the River Kavlingean catchment in Southern Sweden, were drained to make land available for agriculture. Published accounts of nutrient loads from the catchment indicated that until the mid 20th century, factories and urban point sources were the major contributors of both nitrogen and phosphorus. By the middle of the 20th century, the construction of sewage treatment plants had effectively reduced phosphorus pollution. Concurrently, the land drained in the previous century underwent a more intense cultivation, with productivity being maintained by commercial fertilizers. Subsequently, net nutrient loads from agriculture continued to increase, reaching an annual load of 2652 tons total-nitrogen and 70 tons total-phosphorus for the River Kävlingeån. Whilst high nutrient leakage from agricultural watersheds may be a problem which is only recently recognized, it had its origins in nearly a hundred years of commonly accepted agricultural policy. To assess the importance of agriculture as the major source of nutrients to the River Kävlingeån system, three tributary catchment areas, differing in terms of their land use patterns (high, medium and low intensity of agricultural use), were studied and compared with literature figures. Results indicated that agricultural nutrient loss areal coefficients were substantially higher than the literature figures, demonstrating the role of agriculture as source of nutrients to the River Kävlingeån system. The agricultural land use policies of the last fifty years were revealed to be most important with regard to this role. Of such land use policies, the cultivation of the last 10–15% of land employed for agricultural use (primarily riparian ecotones) may be of most significance. The literature indicates that intense agricultural use of this final 10–15% may account for a ca. 50% increase in nitrogen loss. This suggests that one solution to the problem of agricultural diffuse pollution may lie in the restoration and sustainable management of riparian ecotones of agricultural streams.
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  • 89
    ISSN: 1573-5117
    Keywords: littoral ; reed-belt decline ; Phragmites australis ; nitrogen ; eutrophication ; productivity
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Shoot biomass and nitrogen, accumulated within above-ground plant biomass in autumn, correlate with nitrogen availability indicated by nitrogen content (% DM) of several shoot parts during the height of the growth period. A higher nitrogen percentage of the shoots is correlated with a higher shoot loss and subsequent substitution by branching and tillering during and continuing toward the end of the growth period. A delayed switch from the vegetative to the generative phase reduces the translocation of reserve material to the rhizome. Increasing nitrogen load is at least one of the factors causing instability and reed-belt decline.
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  • 90
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    Hydrobiologia 252 (1993), S. 1-22 
    ISSN: 1573-5117
    Keywords: lakes ; reservoirs ; carbon ; nitrogen ; phosphate ; sediments ; accumulation ; eutrophication
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract This paper is an overview of Russian literature dealing with the accumulation, the transformations and the release of phosphate and nitrogen compounds in a great number of Russian lakes and reservoirs. A considerable data bank has been analysed. Special attention is given to the relations of N- and P-accumulation with the input and transformation of organic carbon, as well as to the release mechanisms, often in relation to eutrophication of the lakes and reservoirs. It is shown that the major input of organic matter into the sediments comes from autochthonous material, and is usually 〉 70 %. The relative importance of phytoplankton and macrophytes as sources of organic matter is discussed; it appears that trophic state, depth and other factors may have a large influence on this ratio. In shallow eutrophic lakes macrophytes may be the source of organic matter, which source can amount to 1.5–2.5 times that of phytoplankton. It is also shown that the C/N ratio is not a good indicator of the source of the organic matter, because their C/N ratios often are not very different. The decomposition rate of organic matter was analysed; it depends on trophic state and other factors. Sediment N accumulation is mostly (〉 90%) in organic form, and depends on nitrogen and organic matter inputs coming from phytoplankton or macrophytes. A correlation coefficient of 0.9–0.95 was found in 176 lakes. In 113 lakes the N accumulation was 0.11 x C accumulation, with C/N ratios between 7.4 and 12.9. Ammonification was rather constant in different groups of lakes; values were often about 20–25 mg m−2 d−1. The presence of the different forms of nitrogen in interstitial water and in adsorbed forms is discussed. The N in interstitial water is usually in the form of NH3. Sediment P-accumulation is usually in inorganic form and is related to primary production. Three different groups of sediments could be distinguished with C/P ratios of 31–100, of 101–350 and 〉 350. In hard water lakes P sedimentation was found to be 0.3–0.5 times that in soft water lakes with comparable primary production. The relative occurrence of apatite, non-apatite and residual P in sediments was calculated. In the interstitial water the P concentration appeared to be controlled by the input and decomposition of organic matter. The concentration of phosphate dissolved in the interstitial water of the top 2 cm layer is often 10–100 times lower than that of the dissolved N. The concentrations of interstitial phosphate are from a few μgl−1 up to 15 mgl−1, but the higher concentrations occur only rarely. Different types of vertical profiles of P compounds in the sediments were shown to be related with the presence of an oxidised zone, the presence of clay etc. Autochthonous apatite and non-apatite phosphates are more mobile than the allochthonous ones and are in equilibrium with interstitial phosphate. Accumulation of autochthonous apatite in sediments is controlled by decomposition of organic matter and accumulation of carbonates.
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  • 91
    ISSN: 1573-5117
    Keywords: agriculture ; algae ; lake ; littoral ; macrophytes ; nitrogen ; phosphorus
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract We are studying present conditions and consequences of material movement from land to water in the Lake Titicaca basin, and how fluxes are affected by human activities. The principal objective of this research is to describe and explain the variability in the Andean Altiplano of (a) water, nutrient and sediment fluxes from land and (b) composition, nutrient limitation and other important features of nearshore lake communities, and compare the effects of different agricultural practices (especially traditional and modern) on these factors. We are focusing on a comparison of the impacts of two forms of agriculture in this region: ancient raised fields currently under rehabilitation, and flat pastures and fields, which are more common. Results of the first year of study indicate there is substantial variability in nitrogen and phosphorus dynamics in relation to ecotone complexity (simple vs. intermediate vs. complex). Raised field sites have the beneficial effect of reducing high available nutrient concentrations (nitrate and soluble reactive phosphorus) and sediment load (measured as turbidity) as the water passes through them enroute to the lake. Aquatic vegetation (algae and macrophytes) reflect well ambient total nitrogen and phosphorus concentrations. Experimental nutrient limitation bioassays indicate that nitrogen is the most important limiting nutrient, though there is important spatial variability within the landscape, and phosphorus as well as nitrogen can be limiting.
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  • 92
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    Hydrobiologia 251 (1993), S. 341-349 
    ISSN: 1573-5117
    Keywords: nutrients ; ecotones ; Potomac River ; nitrogen ; watersheds
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The utility of the ecotone concept in nutrient management studies of the Potomac River basin, a large USA watershed, is examined. The MAB hypothesis suggesting that ‘the influence of an ecotone or adjacent system is proportional to the length and scope of the interfaces’ (Naiman et al., 1989) is the major focus of this paper. The land-riverine ecotone appears to have a major influence on the total nitrogen balance and river export flux of nitrogen for the upper Potomac River basin. A method of converting conventional areal flux units into linear flux rates is suggested.
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  • 93
    ISSN: 1573-5036
    Keywords: ammonium ; nitrate ; nitrification ; nitrogen ; old-growth forest
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Old-growth forest stands of mixed species composition provide the opportunity to study species-specific influences on soil properties. We monitored rates of nitrogen mineralization, nitrification and an index of ammonium and nitrate uptake in a mixed old-growth stand of Douglas-fir (Pseudotsuga menziesii), western hemlock (Tsuga heterophylla) and western redcedar (Thuja plicata) over a two-year period. Litter and mineral soil (0–10-cm depth) were sampled adjacent to ten large trees of each species. After initial characterization of litter and soil, buried bags were incubated in both layers for ca. 2-month intervals. Soil and litter pH was lowest near western hemlocks. Nitrification, nitrate concentrations, and percent uptake as nitrate differed among the tree species; rates were highest near western redcedars. For all species, percent nitrification and nitrate uptake rate were higher in soil than in litter. The results indicate species-specific effects on ammonium and nitrate production and uptake within this forest type.
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  • 94
    ISSN: 1573-5036
    Keywords: added nitrogen interactions ; groundnut ; maize ; nitrogen ; 15N-isotope methodology ; residual effect
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Four cultivars of groundnut were grown in upland soil in Northeast Thailand to study the residual benefit of the stover to a subsequent maize crop. An N-balance estimate of the total residual N in the maize supplied by the groundnut was made. In addition three independent estimates were made of the residual benefits to maize when the groundnut stover was returned to the land and incorporated. The first estimate (Estimate 1) was an N-balance estimate. A dual labelling approach was used where 15N-labelled stover was added to unlabelled microplots (Estimate 2) or unlabelled stover was added to 15N-labelled soil microplots (Estimate 3). The nodulating groundnut cultivars fixed between 59–64% of their nitrogen (as estimated by the 15N isotope dilution method using non-nodulating groundnut as a non-fixing reference) producing between 100 and 130 kg N ha-1 in their stover. Although the following maize crop suffered from drought stress, maize grain N and dry weights were up to 80% and 65% greater respectively in the plots where the stover was returned as compared with the plots where the stover was removed. These benefits were comparable with applications of 75 kg N ha-1 nitrogen in the form of urea. The total residual N estimates of the contribution of the nodulated groundnut to the maize ranged from 16.4–27.5 kg N ha-1. Estimates of the residual N supplied by the stover and fallen leaves ranged from 11.9–21.3 kg N ha-1 using the N-balance method (Estimate 1), from 6.3–9.6 kg N ha-1 with the labelled stover method (Estimate 2) and from 0–11.4 kg N ha-1 with the labelled soil method. There was closest agreement between the two 15N based estimates suggesting that ‘apparent added nitrogen interactions’ in these soils may not be important and that N balance estimates can overestimate the residual N in crops following legumes, even in very poor soils. This work also indicates the considerable ability of local groundnut cultivars to fix atmospheric nitrogen and the potential benefits from returning and incorporating legume residues to the soil in the upland cropping systems of Northeast Thailand. The applicability of the 15N methodology used here and possible reasons for the discrepancies between estimates 1, 2 and 3 are discussed.
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  • 95
    ISSN: 1573-5060
    Keywords: Wheat ; Triticum aestivum ; landrace ; semidwarf ; phosphorus ; nitrogen ; fertilization ; genetic improvement ; breeding
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract In recent decades, most winter wheat (Triticum aestivum L.) breeding in the United States has been done in field nurseries in which the soil receives ample fertilization. To determine the effects of these breeding efforts on productivity under low-fertility conditions, we evaluated twenty-nine winter wheat genotypes (seven Asian landraces; thirteen standard-height U.S. cultivars released between 1874 and 1971; and nine semidwarf cultivars released between 1977 and 1988) under severe fertility stress at three Kansas, USA locations. Experiments included fertilized and unfertilized treatments. The modern, semidwarf cultivars yielded 18% and 20% more, on average, than landraces and standard-height cultivars under low and high fertility, respectively; however, only the latter difference reached the 5% significance level. At only one location (Hays) was there a significant genotype X fertility interaction: there, 89% of the semidwarf cultivars, only 8% of the standard cultivars, and 57% of the landraces responded to fertilization. The regression coefficient of mean grain yield (unfertilized) on year of introduction or release for standard and semidwarf cultivars was zero, indicating that a century of breeding has produced no genetic improvement in performance under these low-fertility conditions. Although we found that the usual yield advantage of modern cultivars is not expressed under very low fertility, we saw no evidence that older cultivars are superior under those conditions.
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  • 96
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    Biogeochemistry 20 (1993), S. 45-62 
    ISSN: 1573-515X
    Keywords: atmospheric deposition ; forest ecosystems ; litter decomposition ; The Netherlands ; nitrogen
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology , Geosciences
    Notes: Abstract Litterbag experiments were carried out in five forest ecosystems in the Netherlands to study weight loss and nitrogen dynamics during the first two years of decomposition of leaf and needle litter. All forests were characterized by a relatively high atmospheric nitrogen input by throughfall, ranging from 22–55 kg N ha−1 yr−1. Correlation analysis of all seven leaf and needle litters revealed no significant relation between the measured litter quality indices (nitrogen and lignin concentration, lignin-to-nitrogen ratio) and the decomposition rate. A significant linear relation was found between initial lignin-to-nitrogen ratio and critical nitrogen concentration, suggesting an effect of litter quality on nitrogen dynamics. Comparison of the decomposition of oak leaves in a nitrogen-limited and a nitrogen-saturated forest suggested an increased nitrogen availability. The differences in capacities to retain atmospheric nitrogen inputs between these two sites could be explained by differences in net nitrogen immobilization in first year decomposing oak leaves: in the nitrogen-limited oak forest a major part (55%) of the nitrogen input by throughfall was immobilized in the first year oak leaf litter. The three coniferous forests consisted of two monocultures of Douglas fir and a mixed stand of Douglas fir and Scots pine. Despite comparable litter quality in the Douglas fir needles in all sites, completely different nitrogen dynamics were found.
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  • 97
    ISSN: 1573-515X
    Keywords: chronosequence ; montane tropical forest ; nitrogen ; soil development ; phosphorus ; tropical forest
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology , Geosciences
    Notes: Abstract We determined the effects of nutrient amendments on plant growth in three tropical montane rainforest sites representing a sequence of soil ages (〈 30, 200, and ≈ 2000 y). Factorial fertilization with nitrogen, phosphorus, and all other essential nutrients (combined) was applied to the two younger sites; only nitrogen was applied to the oldest one. Nitrogen supply represented the most important limitation to plant growth in the two younger sites; additions of nitrogen caused significant increases in tree diameter increment, height growth, litterfall, and most other growth-related parameters. In contrast, nitrogen additions had no significant effect on plant growth in the oldest site. Phosphorus additions increased extractable soil phosphorus and plant tissue phosphorus, but did not increase plant growth at the young sites. The results are consistent with Walker & Syers' (1976) model for the control of nutrient limitation during soil development.
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  • 98
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    Cytotechnology 11 (1993), S. 17-22 
    ISSN: 1573-0778
    Keywords: olfactory neuroepithelium ; neural development and regeneration ; neuronal phenotype ; gene expression ; OMP ; transgenic mice ; B50/GAP43 ; OLF-1 ; transcription
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine , Process Engineering, Biotechnology, Nutrition Technology
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  • 99
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    World journal of microbiology and biotechnology 9 (1993), S. 433-443 
    ISSN: 1573-0972
    Keywords: Alginate ; gene expression ; negative regulators ; positive regulators ; promoters ; Pseudomonas ; TOL plasmid
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: Abstract Gene regulation studies in pseudomonad bacteria are mainly restricted to Pseudomonas aeruginosa and Pseudomonas putida. Constitutive promoters exhibit DNA sequences similar to the σ 70-dependent constitutive promoters of Escherichia coli. The TOL meta-cleavage pathway operon promoter and the nah operon promoters are the best characterized σ 70-dependent promoters, which exhibit-10 regions rich in As and Ts and non-conserved-35 regions. The DNA binding motif recognized by the respective positive regulators lies between-40 and-80. Another set of positively controlled promoters exhibit upstream activator sequences located between-100 and-500. Transcription stimulation from some of these promoters also involves σ 54 and/or IHF protein. In this class of promoters, DNA binding is required to establish open complexes. Promoters for the utilization of histidine (hut) are under negative control by the HutC protein. hut promoters exhibit-10/-35 consensus regions and an overlapping operator sequence between-15 and-50. Repression of hut promoters seems to be achieved through steric hindrance of RNA polymerase. Another set of promoters are controlled by catabolite repression, which seems to be cyclic-AMP independent.
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  • 100
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    World journal of microbiology and biotechnology 9 (1993), S. 461-467 
    ISSN: 1573-0972
    Keywords: Aspergillus nidulands ; catabolite repression ; gene expression ; penicillin ; Penicillium chrysogenum ; Plectomycetes ; regulation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: Abstract Carbon catabolite repression and pH regulation are regulatory circuits with a wide domain of action in the Plectomycetes. Penicillin biosynthesis is one of the pathways which are under their control. The conclusions obtained so far, which are based on studies of the genetic and molecular regulation of the penicillin pathway of Aspergillus nidulans, would have been much harder to produce using an organism such as Penicillium chrysogenum (the industrial penicillin producer). However, A. nidulans and P. chrysogenum are close in terms of their phylogeny and one can reasonably predict that the conclusions about A. nidulans, which are summarized in this review and which are of unquestionable biotechnological relevance, will be extrapolable to the industrial organism.
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