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  • Articles  (2,344,578)
  • Springer Nature  (1,067,145)
  • Wiley  (1,035,504)
  • American Institute of Physics (AIP)  (241,929)
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  • 1
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    Dynamic species distribution models of Antarctic blue whales in the Weddell Sea using visual sighting and passive acoustic monitoring data (2024)
    Wiley
    In:  EPIC3Diversity and Distributions, Wiley, 30(1), pp. 87-105, ISSN: 1366-9516
    Details
    Publication Date: 2024-02-12
    Description: Aim: Species distribution models (SDMs) are essential tools in ecology and conservation. However, the scarcity of visual sightings of marine mammals in remote polar areas hinders the effective application of SDMs there. Passive acoustic monitoring (PAM) data provide year-round information and overcome foul weather limitations faced by visual surveys. However, the use of PAM data in SDMs has been sparse so far. Here, we use PAM-based SDMs to investigate the spatiotemporal distribution of the critically endangered Antarctic blue whale in the Weddell Sea. Location: The Weddell Sea. Methods: We used presence-only dynamic SDMs employing visual sightings and PAM detections in independent models. We compared the two independent models with a third combined model that integrated both visual and PAM data, aiming at leveraging the advantages of each data type: the extensive spatial extent of visual data and the broader temporal/environmental range of PAM data. Results: Visual and PAM data prove complementary, as indicated by a low spatial overlap between daily predictions and the low predictability of each model at detections of other data types. Combined data models reproduced suitable habitats as given by both independent models. Visual data models indicate areas close to the sea ice edge (SIE) and with low-to-moderate sea ice concentrations (SIC) as suitable, while PAM data models identified suitable habitats at a broader range of distances to SIE and relatively higher SIC. Main Conclusions: The results demonstrate the potential of PAM data to predict year-round marine mammal habitat suitability at large spatial scales. We provide reasons for discrepancies between SDMs based on either data type and give methodological recommendations on using PAM data in SDMs. Combining visual and PAM data in future SDMs is promising for studying vocalized animals, particularly when using recent advances in integrated distribution modelling methods.
    Repository Name: EPIC Alfred Wegener Institut
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  • 2
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    Sustainability: We need to focus on overall system outcomes rather than simplistic targets (2024)
    Wiley
    In:  EPIC3People and Nature, Wiley, ISSN: 2575-8314
    Details
    Publication Date: 2024-02-12
    Description: Many of the global challenges that confront humanity are interlinked in a dynamic complex network, with multiple feedback loops, nonlinear interactions and interdependencies that make it difficult, if not impossible, to consider individual threats in isolation. These challenges are mainly dealt with, however, by considering individual threats in isolation (at least in political terms). The mitigation of dual climate and biodiversity threats, for example, is linked to a univariate 1.5°C global warming boundary and a global area conservation target of 30% by 2030. The situation has been somewhat improved by efforts to account for interactions through multidimensional target setting, adaptive and open management and market-based decision pathways. But the fundamental problem still remains—that complex systems such as those formed by the network of global threats have emergent properties that are more than the sum of their parts. We must learn how to deal with or live with these properties if we are to find effective ways to cope with the threats, individually and collectively. Here, we argue that recent progresses in complex systems research and related fields have enhanced our ability to analyse and model such entwined systems to the extent that it offers the promise of a new approach to sustainability. We discuss how this may be achieved, both in theory and in practice, and how human cultural factors play an important but neglected role that could prove vital to achieving success. Read the free Plain Language Summary for this article on the Journal blog.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , peerRev
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  • 3
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    The Arctic summer microbiome across Fram Strait: Depth, longitude, and substrate concentrations structure microbial diversity in the euphotic zone (2024)
    Wiley
    In:  EPIC3Environmental Microbiology, Wiley, 26, pp. e16568-e16568, ISSN: 1462-2912
    Details
    Publication Date: 2024-02-19
    Description: The long-term dynamics of microbial communities across geographic, hydrographic, and biogeochemical gradients in the Arctic Ocean are largely unknown. To address this, we annually sampled polar, mixed, and Atlantic water masses of the Fram Strait (2015–2019; 5–100 m depth) to assess microbiome composition, substrate concentrations, and oceanographic parameters. Longitude and water depth were the major determinants (~30%) of microbial community variability. Bacterial alpha diversity was highest in lower-photic polar waters. Community composition shifted from west to east, with the prevalence of, for example, Dadabacteriales and Thiotrichales in Arctic- and Atlantic-influenced waters, respectively. Concentrations of dissolved organic carbon peaked in the western, compared to carbohydrates in the chlorophyll-maximum of eastern Fram Strait. Interannual differences due to the time of sampling, which varied between early (June 2016/2018) and late (September 2019) phytoplankton bloom stages, illustrated that phytoplankton composition and resulting availability of labile substrates influence bacterial dynamics. We identified 10 species clusters with stable environmental correlations, representing signature populations of distinct ecosystem states. In context with published metagenomic evidence, our microbial-biogeochemical inventory of a key Arctic region establishes a benchmark to assess ecosystem dynamics and the imprint of climate change.
    Repository Name: EPIC Alfred Wegener Institut
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  • 4
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    Generation of macro- and microplastic databases by high-throughput FTIR analysis with microplate readers (2024)
    Springer Nature
    In:  EPIC3Analytical and Bioanalytical Chemistry, Springer Nature, 416(6), pp. 1311-1320, ISSN: 1618-2642
    Details
    Publication Date: 2024-03-04
    Description: FTIR spectral identification is today’s gold standard analytical procedure for plastic pollution material characterization. High-throughput FTIR techniques have been advanced for small microplastics (10–500 µm) but less so for large microplastics (500–5 mm) and macroplastics (〉 5 mm). These larger plastics are typically analyzed using ATR, which is highly manual and can sometimes destroy particles of interest. Furthermore, spectral libraries are often inadequate due to the limited variety of reference materials and spectral collection modes, resulting from expensive spectral data collection. We advance a new high-throughput technique to remedy these problems using FTIR microplate readers for measuring large particles (〉 500 µm). We created a new reference database of over 6000 spectra for transmission, ATR, and reflection spectral collection modes with over 600 plastic, organic, and mineral reference materials relevant to plastic pollution research. We also streamline future analysis in microplate readers by creating a new particle holder for transmission measurements using off-the-shelf parts and fabricating a nonplastic 96-well microplate for storing particles. We determined that particles should be presented to microplate readers as thin as possible due to thick particles causing poor-quality spectra and identifications. We validated the new database using Open Specy and demonstrated that additional transmission and reflection spectra reference data were needed in spectral libraries.
    Repository Name: EPIC Alfred Wegener Institut
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  • 5
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    A temperature‐controlled, circular maintenance system for studying growth and development of pelagic tunicates (salps) (2024)
    Wiley
    In:  EPIC3Limnology and Oceanography Methods, Wiley, ISSN: 1541-5856
    Details
    Publication Date: 2024-02-29
    Description: Salps have attracted attention as zooplankton organisms that may be able to expand their habitat range and increase their ecological importance in the face of ongoing global warming. Due to their gelatinous nature, unique feeding strategy, and reproductive ecology such changes could have profound impacts on regional marine ecosystems. While their role in the regional carbon cycle is receiving attention, our knowledge of their physiology and life cycle is still limited. This knowledge gap is mainly due to their fragile gelatinous nature, which makes it difficult to capture and maintain intact specimen in the laboratory. We present here a modified kreisel tank system that has been tested onboard a research vessel with the Southern Ocean salp Salpa thompsoni and at a research station with Salpa fusiformis and Thalia democratica from the Mediterranean Sea. Successful maintenance over days to weeks allowed us to obtain relative growth and developmental rates comparable to in situ field samples of S. thompsoni and S. fusiformis, and provided insights into previously unknown features of their life cycle (e.g., testes development). Our results show that traditional methods of estimating growth, such as cohort analysis, may lead to a general overestimation of growth rates and neglect individual strategies (e.g., shrinkage), which can affect the results and conclusions drawn from population dynamic models. By providing a starting point for the successful maintenance of different species, comparable experiments on the physiology of salps is made possible. This will contribute to refining model parameters and improving the reliability of the predictions.
    Repository Name: EPIC Alfred Wegener Institut
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  • 6
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    The micro‐seismicity of Co. Donegal (Ireland): Defining baseline seismicity in a region of slow lithospheric deformation (2024)
    Wiley
    Details
    Publication Date: 2024-02-07
    Description: A catalogue of precisely located micro-seismicity is fundamental for investigating seismicity and rock physical properties in active tectonic and volcanic regions and for the definition of a ‘baseline’ seismicity, required for a safe future exploitation of georesource areas. In this study, we produce the first manually revised catalogue of micro-seismicity for Co. Donegal region (Ireland), an area of about 50K M2 of on-going deformation, aimed at localizing natural micro-seismic events occurred between 2012 and 2015. We develop a stochastic method based on a Markov chain Monte Carlo (McMC) sampling approach to compute earthquake hypocentral location parameters. Our results indicates that micro-seismicity is present with magnitudes lower than 2 (the highest magnitude is 2.8).The recorded seismicity is almost clustered along previously mapped NE-SW trending, steeply dipping faults and confined within the upper crust (focal depth less than 10 km). We also recorded anthropogenic seismicity mostly related to quarries' activity in the study area.
    Description: Published
    Description: 62-76
    Description: OST1 Alla ricerca dei Motori Geodinamici
    Description: JCR Journal
    Keywords: 04.06. Seismology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 7
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    Translation, collision and vertical‐axis rotation in the Organyà and Montsec minibasins (South‐Central Pyrenees, Spain) (2024)
    Wiley
    Details
    Publication Date: 2024-02-01
    Description: This paper presents a sequentially restored cross-section of the Organyà and Montsec minibasins based on geological mapping, new field observations and available borehole data. The main objective was to describe the geometry and evolution of both basins in terms of salt tectonics and minibasin mobility. To this end, a comprehensive palaeomagnetic database has been used to constrain vertical-axis rotations potentially related to minibasin translation and pivoting. The Organyà minibasin constitutes an asymmetric depocentre formed during the Upper Jurassic-Lower Cretaceous by translation above a southerly inclined salt layer. Salt evacuation and minibasin touchdown induced salt accumulation on the northern side of the basin that culminated in the development of the major Santa Fe unconformity during the late Albian—early Cenomanian. Indicative of salt quiescence is the following isopachous Cenomanian to lower Santonian sequence Salt tectonics resumed during the late Santonian—Palaeocene, with the Montsec minibasin downbuilding coinciding with the onset of Pyrenean convergence. Changes of the base-salt topography reflects regional-scale geodynamic processes. The acceleration of crustal thinning in the North Pyrenean zone during the late Albian-early Cenomanian favoured uplift in the Axial Zone, increasing slope and triggering salt mobilization in the Southern Pyrenees. Likewise, the onset of contraction renewed the downslope gliding of the Organyà and Montsec minbasins, and supports the idea that the early stages of basin inversion were governed by gravity tectonics. The kinematic reconstruction suggests that the more that 30° counterclockwise vertical axis rotation records pivoting during the suprasalt translation of the Organyà minibasin rather than solely the Iberian microplate rotation.
    Description: Published
    Description: e12846
    Description: OSA1: Variazioni del campo magnetico terrestre, imaging crostale e sicurezza del territorio
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 8
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    Long‐term shifts in phenology, thermal niche, population size, and their interactions in marine pelagic copepods (2024)
    Wiley
    In:  EPIC3Limnology and Oceanography, Wiley, ISSN: 0024-3590
    Details
    Publication Date: 2024-02-08
    Description: Under climatic warming many species shift their seasonal timing of life cycle events (phenology) and seasonal abundance distribution, but whether they maintain the same thermal niche is still poorly understood. Here, we studied multidecadal trends in abundance and phenology of seven major copepod species across three stations (Stonehaven (SH), Helgoland Roads (HR), and Plymouth L4) on the North–West European shelf, spanning ~ 6.5° of latitude. All seven species consistently occupied colder temperatures at the northern station compared to the southerly station, but they maintained the same realized thermal niche over years. Expected phenological shifts (i.e., earlier when warmer) in some stations were obscured possibly by the long-term drop of copepod density in spring–summer, which may be due to a variation in the food/predators abundance. The ongoing spring–summer declines in abundance (~ 50%) of many North Atlantic pelagic species over the last five decades, as found in recent studies, may have also influenced the metrics of seasonal timing. To separate the seasonal timing of life events from that of seasonal abundance distribution, we used a time series of egg production rate (EPR) of Calanus helgolandicus at L4, and found that this shifted later into the summer–autumn over the last 30 yr of warming, coincident with declining spring–summer food and increasing predator abundance. Overall, direct temperature effects do appear to influence the seasonal timing of the copepods, but to explain impacts at individual stations or long-term trends in population size or phenology, understanding the changing balance of food and predators appears to be critical.
    Repository Name: EPIC Alfred Wegener Institut
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  • 9
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    A multiple baseline approach for marine heatwaves (2024)
    Wiley
    In:  EPIC3Limnology and Oceanography, Wiley, ISSN: 0024-3590
    Details
    Publication Date: 2024-02-09
    Description: 〈jats:title〉Abstract〈/jats:title〉〈jats:p〉Marine heatwaves and other extreme temperature events can drive biological responses, including mass mortality. However, their effects depend on how they are experienced by biological systems (including human societies). We applied two different baselines (fixed and shifting) to a time series of North Sea water temperature to explore how slowly vs. quickly adapting systems would experience extreme temperatures. We tested if the properties of marine heatwaves and the association with atmospheric heatwaves were robust to a change in baseline. A fixed baseline produced an increase in the frequency and duration of marine heatwaves, which would be experienced as the new normal by slowly adapting systems; 7 of the 10 most severe heatwaves occurred between 1990 and 2018. The shifting baseline removed the trend in the frequency but not duration of heatwaves; the 1990s appeared as a period of change in the frequency of strong and severe heatwaves as compared to the 1980s. There were also common patterns among baselines: marine heatwaves were more frequent in late summer when temperatures peak; temperature variability was characterized by low frequency, large amplitude fluctuations (i.e., as red noise), known to drive extinction events. In addition, marine heatwaves occurred during or just after atmospheric heatwaves. Our work highlights the importance of identifying properties of marine heatwaves that are robust or contingent on a change in baseline.〈/jats:p〉
    Repository Name: EPIC Alfred Wegener Institut
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  • 10
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    Piecing the barcoding puzzle of Palearctic water frogs (Pelophylax) sheds light on amphibian biogeography and global invasions (2024)
    Wiley
    In:  Global Change Biology vol. 30 no. e17180
    Details
    Publication Date: 2024-03-21
    Description: Palearctic water frogs (genus Pelophylax) are an outstanding model in ecology and evolution, being widespread, speciose, either threatened or threatening to other species through biological invasions, and capable of siring hybrid offspring that escape the rules of sexual reproduction. Despite half a century of genetic research and hundreds of publications, the diversity, systematics and biogeography of Pelophylax still remain highly confusing, in no small part due to a lack of correspondence between studies. To provide a comprehensive overview, we gathered 〉13,000 sequences of barcoding genes from 〉1700 native and introduced localities and built multigene mitochondrial (~17 kb) and nuclear (~10 kb) phylogenies. We mapped all currently recognized taxa and their phylogeographic lineages (〉40) to get a grasp on taxonomic issues, cyto-nuclear discordances, the genetic makeup of hybridogenetic hybrids, and the origins of introduced populations. Competing hypotheses for the molecular calibration were evaluated through plausibility tests, implementing a new approach relying on predictions from the anuran speciation continuum. Based on our timetree, we propose a new biogeographic paradigm for the Palearctic since the Paleogene, notably by attributing a prominent role to the dynamics of the Paratethys, a vast paleo-sea that extended over most of Europe. Furthermore, our results show that distinct marsh frog lineages from Eastern Europe, the Balkans, the Near East, and Central Asia (P. ridibundus ssp.) are naturally capable of inducing hybridogenesis with pool frogs (P. lessonae). We identified 14 alien lineages (mostly of P. ridibundus) over ~20 areas of invasions, especially in Western Europe, with genetic signatures disproportionally pointing to the Balkans and Anatolia as the regions of origins, in line with exporting records of the frog leg industry and the stocks of pet sellers. Pelophylax thus emerges as one of the most invasive amphibians worldwide, and deserves much higher conservation concern than currently given by the authorities fighting biological invasions.
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 11
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    Simulating long-term wildfire impacts on boreal forest structure in Central Yakutia, Siberia, since the Last Glacial Maximum (2024)
    Springer Nature
    In:  EPIC3Fire Ecology, Springer Nature, 20(1), pp. 1-1, ISSN: 1933-9747
    Details
    Publication Date: 2024-03-19
    Description: Background: Wildfires are recognized as an important ecological component of larch-dominated boreal forests in eastern Siberia. However, long-term fire-vegetation dynamics in this unique environment are poorly understood. Recent paleoecological research suggests that intensifying fire regimes may induce millennial-scale shifts in forest structure and composition. This may, in turn, result in positive feedback on intensifying wildfires and permafrost degradation, apart from threatening human livelihoods. Most common fire-vegetation models do not explicitly include detailed individual-based tree population dynamics, but a focus on patterns of forest structure emerging from interactions among individual trees may provide a beneficial perspective on the impacts of changing fire regimes in eastern Siberia. To simulate these impacts on forest structure at millennial timescales, we apply the individual-based, spatially explicit vegetation model LAVESI-FIRE, expanded with a new fire module. Satellite-based fire observations along with fieldwork data were used to inform the implementation of wildfire occurrence and adjust model parameters. Results: Simulations of annual forest development and wildfire activity at a study site in the Republic of Sakha (Yakutia) since the Last Glacial Maximum (c. 20,000 years BP) highlight the variable impacts of fire regimes on forest structure throughout time. Modeled annual fire probability and subsequent burned area in the Holocene compare well with a local reconstruction of charcoal influx in lake sediments. Wildfires can be followed by different forest regeneration pathways, depending on fire frequency and intensity and the pre-fire forest conditions. We find that medium-intensity wildfires at fire return intervals of 50 years or more benefit the dominance of fire-resisting Dahurian larch (Larix gmelinii (Rupr.) Rupr.), while stand-replacing fires tend to enable the establishment of evergreen conifers. Apart from post-fire mortality, wildfires modulate forest development mainly through competition effects and a reduction of the model’s litter layer. Conclusion: With its fine-scale population dynamics, LAVESI-FIRE can serve as a highly localized, spatially explicit tool to understand the long-term impacts of boreal wildfires on forest structure and to better constrain interpretations of paleoecological reconstructions of fire activity.
    Repository Name: EPIC Alfred Wegener Institut
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  • 12
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    Eddy activity in the Arctic Ocean projected to surge in a warming world (2024)
    Springer Nature
    In:  EPIC3Nature Climate Change, Springer Nature, 14(2), pp. 1-7, ISSN: 1758-678X
    Details
    Publication Date: 2024-03-08
    Description: Ocean eddies play a critical role in climate and marine life. In the rapidly warming Arctic, little is known about how ocean eddy activity will change because existing climate models cannot resolve Arctic Ocean mesoscale eddies. Here, by employing a next-generation global sea ice–ocean model with kilometre-scale horizontal resolution in the Arctic, we find a surge of eddy kinetic energy in the upper Arctic Ocean, tripling on average in a four-degree-warmer world. The driving mechanism behind this surge is an increase in eddy generation due to enhanced baroclinic instability. Despite the decline of sea ice, eddy killing (a process in which eddies are dampened by sea ice and winds) will not weaken in its annual mean effect in the considered warming scenario. Our study suggests the importance of adequately representing Arctic eddy activity in climate models for understanding the impacts of its increase on climate and ecosystems.
    Repository Name: EPIC Alfred Wegener Institut
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  • 13
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    Distinct bacterial succession and functional response to alginate in the South, Equatorial, and North Pacific Ocean (2024)
    Wiley
    In:  EPIC3Environmental Microbiology, Wiley, 26(3), pp. e16594-e16594, ISSN: 1462-2912
    Details
    Publication Date: 2024-03-11
    Description: The availability of alginate, an abundant macroalgal polysaccharide, induces compositional and functional responses among marine microbes, but these dynamics have not been characterized across the Pacific Ocean. We investigated alginate-induced compositional and functional shifts (e.g., heterotrophic production, glucose turnover, hydrolytic enzyme activities) of microbial communities in the South Subtropical, Equatorial, and Polar Frontal North Pacific in mesocosms. We observed that shifts in response to alginate were site-specific. In the South Subtropical Pacific, prokaryotic cell counts, glucose turnover, and peptidase activities changed the most with alginate addition, along with the enrichment of the widest range of particle-associated taxa (161 amplicon sequence variants; ASVs) belonging to Alteromonadaceae, Rhodobacteraceae, Phormidiaceae, and Pseudoalteromonadaceae. Some of these taxa were detected at other sites but only enriched in the South Pacific. In the Equatorial Pacific, glucose turnover and heterotrophic prokaryotic production increased most rapidly; a single Alteromonas taxon dominated (60% of the community) but remained low (〈2%) elsewhere. In the North Pacific, the particle-associated community response to alginate was gradual, with a more limited range of alginate-enriched taxa (82 ASVs). Thus, alginate-related ecological and biogeochemical shifts depend on a combination of factors that include the ability to utilize alginate, environmental conditions, and microbial interactions.
    Repository Name: EPIC Alfred Wegener Institut
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  • 14
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    Coupled U–Pb and 40Ar/39Ar chronology of late‐stage intrusions at Elba Island (Italy) supports late Miocene long‐lived magma reservoirs in the Tyrrhenian upper crust (2024)
    Wiley
    Details
    Publication Date: 2024-03-12
    Description: The late Miocene Monte Capanne and Porto Azzurro plutons are investigated by means of coupled U-Pb zircon and 40Ar/39Ar white mica dating to test the occurrence of long-lived magmatic systems in the upper crust. Zircon crystallized for 〉 1 Myr in both plutonic systems, with supersolidus conditions overlapping for ~220 kyr indicating previously unrecognized co-existence of the two reservoirs. The development of the Porto Azzurro high T-aureole is post-dated by continuous igneous zircon crystallization until ~ 6.0 Ma. By linking crystallization to post-emplacement cooling of late-stage pulses in both western and eastern Elba we constrain long-lived sizeable reservoirs (possibly the same reservoir) in the Tyrrhenian upper crust between ~8 and 6 Ma.
    Description: In press
    Description: OST1 Alla ricerca dei Motori Geodinamici
    Description: JCR Journal
    Keywords: 40Ar/39Ar white mica dating ; Elba Island ; long-lived magma reservoirs ; U–Pb zircon dating ; MioceneTyrrhenian crust ; upper crustal granites ; 04. Solid Earth
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 15
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    Epizoic yellow sponge (Poecilosclerida, Demospongiae) expansion on living Scleractinian corals in Bintan, Riau Archipelago, Indonesia (2024)
    Wiley
    In:  Marine Ecology vol. 2024 no. e12796
    Details
    Publication Date: 2024-03-14
    Description: Coral reef ecosystems in Indonesia are under threat due to changes in the environment driven by global climate change, along with local disturbances such as sedimentation and eutrophication. Consequently, comprehensive coral reef monitoring \nactivities have been initiated at numerous locations across Indonesia. In this study, the \nfindings from coral reef health surveys across 14 reef sites (within 40 hectares) in the \nBintan area (Riau Archipelago, Indonesia; 100\xe2\x80\x89km southeast of Singapore) revealed a \npotentially novel epizoic yellow sponge species (Phorbas sp.) that overgrows coral colonies. This species, tentatively classified as a new Phorbas sp. (order Poecilosclerida: \nfamily Hymedesmiidae), was identified through a combined approach employing classical taxonomic methods along with DNA barcoding using the cytochrome c oxidase \nI (COI) gene. At every site, three permanent 20-m transects were established to annually monitor live coral coverage and species composition between 2014 and 2017. \nThe survey indicated a notable change in the overall coral cover during this period. \nThe abundance of coral diseases was investigated in 2014 and 2017. Additionally, the \nprogress of Phorbas sp., was closely monitored (i.e., every second day for one week) \nat Bintan Island (site 11) during the dry season in August 2017. This approach aimed \nto approximate the relative impact of each incident on the coral\'s condition. The results indicated that the most comprehensive change occurred due to the overgrowth \nof Phorbas sp., which affected 12 scleractinian coral species across eight genera in \nalmost all sites except one. The abundance of this epizoic sponge infestation was \nhighest at Pulau Beralas Pasir (site 10), constituting 22.9% of all recorded life forms, \nand lowest at Pulau Pangkil-Besar (site 13), with only 0.7%. The expansion of the thin \nyellow sponge tissue was estimated to increase by up to 0.51\xe2\x80\x89\xc2\xb1\xe2\x80\x890.48\xe2\x80\x89cm2 \n per day on \nPorites coral.
    Keywords: coral disease ; coral health ; expansion progress ; novel sponge ; yellow band disease
    Repository Name: National Museum of Natural History, Netherlands
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  • 16
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    Diatom-mediated food web functioning under ocean artificial upwelling (2024)
    Springer Nature
    In:  EPIC3Scientific Reports, Springer Nature, 14(1), pp. 3955-3955, ISSN: 2045-2322
    Details
    Publication Date: 2024-03-25
    Description: Enhancing ocean productivity by artificial upwelling is evaluated as a nature-based solution for food security and climate change mitigation. Fish production is intended through diatom-based plankton food webs as these are assumed to be short and efficient. However, our findings from mesocosm experiments on artificial upwelling in the oligotrophic ocean disagree with this classical food web model. Here, diatoms did not reduce trophic length and instead impaired the transfer of primary production to crustacean grazers and small pelagic fish. The diatom-driven decrease in trophic efficiency was likely mediated by changes in nutritional value for the copepod grazers. Whilst diatoms benefitted the availability of essential fatty acids, they also caused unfavorable elemental compositions via high carbon-to-nitrogen ratios (i.e. low protein content) to which the grazers were unable to adapt. This nutritional imbalance for grazers was most pronounced in systems optimized for CO2 uptake through carbon-to-nitrogen ratios well beyond Redfield. A simultaneous enhancement of fisheries production and carbon sequestration via artificial upwelling may thus be difficult to achieve given their opposing stoichiometric constraints. Our study suggest that food quality can be more critical than quantity to maximize food web productivity during shorter-term fertilization of the oligotrophic ocean.
    Repository Name: EPIC Alfred Wegener Institut
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  • 17
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    Decadal-scale variability and warming affect spring timing and forest growth across the western Great Lakes region (2024)
    Springer Nature
    In:  EPIC3International Journal of Biometeorology, Springer Nature, 68(4), pp. 1-17, ISSN: 0020-7128
    Details
    Publication Date: 2024-03-26
    Description: The Great Lakes region of North America has warmed by 1–2 °C on average since pre-industrial times, with the most pronounced changes observable during winter and spring. Interannual variability in temperatures remains high, however, due to the influence of ocean-atmosphere circulation patterns that modulate the warming trend across years. Variations in spring temperatures determine growing season length and plant phenology, with implications for whole ecosystem function. Studying how both internal climate variability and the “secular” warming trend interact to produce trends in temperature is necessary to estimate potential ecological responses to future warming scenarios. This study examines how external anthropogenic forcing and decadal-scale variability influence spring temperatures across the western Great Lakes region and estimates the sensitivity of regional forests to temperature using long-term growth records from tree-rings and satellite data. Using a modeling approach designed to test for regime shifts in dynamic time series, this work shows that mid-continent spring climatology was strongly influenced by the 1976/1977 phase change in North Pacific atmospheric circulation, and that regional forests show a strengthening response to spring temperatures during the last half-century.
    Repository Name: EPIC Alfred Wegener Institut
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  • 18
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    Short and decadal impacts of seafloor physical perturbation on the abundances of Lebensspuren ‘traces of life’ in the Peru Basin manganese nodule province (2024)
    Springer Nature
    In:  EPIC3Marine Biodiversity, Springer Nature, 54(1), pp. 11-11, ISSN: 1867-1616
    Details
    Publication Date: 2024-03-27
    Description: Interest in deep-sea mining for polymetallic nodules as an alternative source to onshore mines for various high-technology metals has risen in recent years, as demands and costs have increased. The need for studies to assess its short- and long-term consequences on polymetallic nodule ecosystems is therefore also increasingly prescient. Recent image-based expedition studies have described the temporal impacts on epi-/megafauna seafloor communities across these ecosystems at particular points in time. However, these studies have failed to capture information on large infauna within the sediments or give information on potential transient and temporally limited users of these areas, such as mobile surface deposit feeders or fauna responding to bloom events or food fall depositions. This study uses data from the Peru Basin polymetallic nodule province, where the seafloor was previously disturbed with a plough harrow in 1989 and with an epibenthic sled (EBS) in 2015, to simulate two contrasting possible impact forms of mining disturbance. To try and address the shortfall on information on transient epifauna and infauna use of these various disturbed and undisturbed areas of nodule-rich seafloor, images collected 6 months after the 2015 disturbance event were inspected and all Lebensspuren, ‘traces of life’, were characterized by type (epi- or infauna tracemakers, as well as forming fauna species where possible), along with whether they occurred on undisturbed seafloor or regions disturbed in 1989 or 2015. The results show that epi- and endobenthic Lebensspuren were at least 50% less abundant across both the ploughed and EBS disturbed seafloors. This indicates that even 26 years after disturbance, sediment use by fauna may remain depressed across these areas.
    Repository Name: EPIC Alfred Wegener Institut
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  • 19
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    Geography and ecology shape the phylogenetic composition of Amazonian tree communities (2024)
    Wiley
    In:  Journal of Biogeography vol. 2024 no. 14816
    Details
    Publication Date: 2024-03-31
    Description: Aim: Amazonia hosts more tree species from numerous evolutionary lineages, both young and ancient, than any other biogeographic region. Previous studies have shown that tree lineages colonized multiple edaphic environments and dispersed widely across Amazonia, leading to a hypothesis, which we test, that lineages should not be strongly associated with either geographic regions or edaphic forest types. Location: Amazonia. Taxon: Angiosperms (Magnoliids; Monocots; Eudicots). Methods: Data for the abundance of 5082 tree species in 1989 plots were combined with a mega-phylogeny. We applied evolutionary ordination to assess how phylogenetic composition varies across Amazonia. We used variation partitioning and Moran's eigenvector maps (MEM) to test and quantify the separate and joint contributions of spatial and environmental variables to explain the phylogenetic composition of plots. We tested the indicator value of lineages for geographic regions and edaphic forest types and mapped associations onto the phylogeny. Results: In the terra firme and várzea forest types, the phylogenetic composition varies by geographic region, but the igapó and white-sand forest types retain a unique evolutionary signature regardless of region. Overall, we find that soil chemistry, climate and topography explain 24% of the variation in phylogenetic composition, with 79% of that variation being spatially structured (R2= 19% overall for combined spatial/environmental effects). The phylogenetic composition also shows substantial spatial patterns not related to the environmental variables we quantified (R2= 28%). A greater number of lineages were significant indicators of geographic regions than forest types. Main Conclusion: Numerous tree lineages, including some ancient ones (〉66 Ma), show strong associations with geographic regions and edaphic forest types of Amazonia. This shows that specialization in specific edaphic environments has played a long-standing role in the evolutionary assembly of Amazonian forests. Furthermore, many lineages, even those that have dispersed across Amazonia, dominate within a specific region, likely because of phylogenetically conserved niches for environmental conditions that are prevalent within regions.
    Keywords: community assembly ; dispersal limitation ; environmental selection ; evolutionary principal ; component analysis ; indicator lineage analysis ; Moran's eigenvector maps ; neotropics ; Niche ; conservatism ; tropical rain forests
    Repository Name: National Museum of Natural History, Netherlands
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  • 20
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    The second most abundant dinophyte in the ponds of a botanical garden is a species new to science (2024)
    Wiley
    In:  EPIC3Journal of Eukaryotic Microbiology, Wiley, 71(2), pp. e13015-e13015, ISSN: 1066-5234
    Details
    Publication Date: 2024-04-08
    Description: In the microscopy realm, a large body of dark biodiversity still awaits to be uncovered. Unarmoured dinophytes are particularly neglected here, as they only present inconspicuous traits. In a remote German locality, we collected cells, from which a monoclonal strain was established, to study morphology using light and electron microscopy and to gain DNA sequences from the rRNA operon. In parallel, we detected unicellular eukaryotes in ponds of the Botanical Garden Munich-Nymphenburg by DNA-metabarcoding (V4 region of the 18S rRNA gene), weekly sampled over the course of a year. Strain GeoK*077 turned out to be a new species of Borghiella with a distinct position in molecular phylogenetics and characteristic coccoid cells of ovoid shape as the most important diagnostic trait. Borghiella ovum, sp. nov., was also present in artificial ponds of the Botanical Garden and was the second most abundant dinophyte detected in the samples. More specifically, Borghiella ovum, sp. nov., shows a clear seasonality, with high frequency during winter months and complete absence during summer months. The study underlines the necessity to assess the biodiversity, particularly of the microscopy realm more ambitiously, if even common species such as formerly Borghiella ovum are yet unknown to science.
    Repository Name: EPIC Alfred Wegener Institut
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  • 21
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    Multiannual patterns of genetic structure and mating type ratios highlight the complex bloom dynamics of a marine planktonic diatom (2024)
    Springer Nature
    In:  EPIC3Scientific Reports, Springer Nature, 14(1), pp. 6028-6028, ISSN: 2045-2322
    Details
    Publication Date: 2024-04-08
    Description: Understanding the genetic structure of populations and the processes responsible for its spatial and temporal dynamics is vital for assessing species’ adaptability and survival in changing environments. We investigate the genetic fingerprinting of blooming populations of the marine diatom Pseudo-nitzschia multistriata in the Gulf of Naples (Mediterranean Sea) from 2008 to 2020. Strains were genotyped using microsatellite fingerprinting and natural samples were also analysed with Microsatellite Pool-seq Barcoding based on Illumina sequencing of microsatellite loci. Both approaches revealed a clonal expansion event in 2013 and a more stable genetic structure during 2017–2020 compared to previous years. The identification of a mating type (MT) determination gene allowed to assign MT to strains isolated over the years. MTs were generally at equilibrium with two notable exceptions, including the clonal bloom of 2013. The populations exhibited linkage equilibrium in most blooms, indicating that sexual reproduction leads to genetic homogenization. Our findings show that P. multistriata blooms exhibit a dynamic genetic and demographic composition over time, most probably determined by deeper-layer cell inocula. Occasional clonal expansions and MT imbalances can potentially affect the persistence and ecological success of planktonic diatoms.
    Repository Name: EPIC Alfred Wegener Institut
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  • 22
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    Biogeographic gradients of picoplankton diversity indicate increasing dominance of prokaryotes in warmer Arctic fjords (2024)
    Springer Nature
    In:  EPIC3Communications Biology, Springer Nature, 7(1), pp. 256-256, ISSN: 2399-3642
    Details
    Publication Date: 2024-04-08
    Description: Climate change is opening the Arctic Ocean to increasing human impact and ecosystem changes. Arctic fjords, the region’s most productive ecosystems, are sustained by a diverse microbial community at the base of the food web. Here we show that Arctic fjords become more prokaryotic in the picoplankton (0.2–3 µm) with increasing water temperatures. Across 21 fjords, we found that Arctic fjords had proportionally more trophically diverse (autotrophic, mixotrophic, and heterotrophic) picoeukaryotes, while subarctic and temperate fjords had relatively more diverse prokaryotic trophic groups. Modeled oceanographic connectivity between fjords suggested that transport alone would create a smooth gradient in beta diversity largely following the North Atlantic Current and East Greenland Current. Deviations from this suggested that picoeukaryotes had some strong regional patterns in beta diversity that reduced the effect of oceanographic connectivity, while prokaryotes were mainly stopped in their dispersal if strong temperature differences between sites were present. Fjords located in high Arctic regions also generally had very low prokaryotic alpha diversity. Ultimately, warming of Arctic fjords could induce a fundamental shift from more trophic diverse eukaryotic- to prokaryotic-dominated communities, with profound implications for Arctic ecosystem dynamics including their productivity patterns.
    Repository Name: EPIC Alfred Wegener Institut
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  • 23
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    Subsurface warming in the Antarctica’s Weddell Sea can be avoided by reaching the 2∘C warming target (2024)
    Springer Nature
    In:  EPIC3Communications Earth & Environment, Springer Nature, 5(1), pp. 93-93, ISSN: 2662-4435
    Details
    Publication Date: 2024-04-03
    Description: Recently, seasonal pulses of modified Warm Deep Water have been observed near the Filchner Ice Shelf front in the Weddell Sea, Antarctica. Here, we investigate the temperature evolution of subsurface waters in the Filchner Trough under four future scenarios of carbon dioxide emissions using the climate model AWI-CM. Our model simulates these warm intrusions, suggests more frequent pulses in a warmer climate, and supports the potential for a regime shift from cold to warm Filchner Trough in two high-emission scenarios. The regime shift is governed in particular by decreasing local sea ice formation and a shoaling thermocline. Cavity circulation is not critical in triggering the change. Consequences would include increased ice shelf basal melting, reduced buttressing of fast-flowing ice streams, loss of grounded ice and an acceleration of global sea level rise. According to our simulations, the regime shift can be avoided and the Filchner Trough warming can be restricted to 0.5 ∘C by reaching the 2 ∘C climate goal.
    Repository Name: EPIC Alfred Wegener Institut
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  • 24
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    Diverse plasmid systems and their ecology across human gut metagenomes revealed by PlasX and MobMess (2024)
    Springer Nature
    In:  EPIC3Nature Microbiology, Springer Nature, 9(3), pp. 830-847, ISSN: 2058-5276
    Details
    Publication Date: 2024-04-03
    Description: Plasmids alter microbial evolution and lifestyles by mobilizing genes that often confer fitness in changing environments across clades. Yet our ecological and evolutionary understanding of naturally occurring plasmids is far from complete. Here we developed a machine-learning model, PlasX, which identified 68,350 non-redundant plasmids across human gut metagenomes and organized them into 1,169 evolutionarily cohesive ‘plasmid systems’ using our sequence containment-aware network-partitioning algorithm, MobMess. Individual plasmids were often country specific, yet most plasmid systems spanned across geographically distinct human populations. Cargo genes in plasmid systems included well-known determinants of fitness, such as antibiotic resistance, but also many others including enzymes involved in the biosynthesis of essential nutrients and modification of transfer RNAs, revealing a wide repertoire of likely fitness determinants in complex environments. Our study introduces computational tools to recognize and organize plasmids, and uncovers the ecological and evolutionary patterns of diverse plasmids in naturally occurring habitats through plasmid systems.
    Repository Name: EPIC Alfred Wegener Institut
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  • 25
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    Dietary- and host-derived metabolites are used by diverse gut bacteria for anaerobic respiration (2024)
    Springer Nature
    In:  EPIC3Nature Microbiology, Springer Nature, 9(1), pp. 55-69, ISSN: 2058-5276
    Details
    Publication Date: 2024-04-03
    Description: Respiratory reductases enable microorganisms to use molecules present in anaerobic ecosystems as energy-generating respiratory electron acceptors. Here we identify three taxonomically distinct families of human gut bacteria (Burkholderiaceae, Eggerthellaceae and Erysipelotrichaceae) that encode large arsenals of tens to hundreds of respiratory-like reductases per genome. Screening species from each family (Sutterella wadsworthensis, Eggerthella lenta and Holdemania filiformis), we discover 22 metabolites used as respiratory electron acceptors in a species-specific manner. Identified reactions transform multiple classes of dietary- and host-derived metabolites, including bioactive molecules resveratrol and itaconate. Products of identified respiratory metabolisms highlight poorly characterized compounds, such as the itaconate-derived 2-methylsuccinate. Reductase substrate profiling defines enzyme–substrate pairs and reveals a complex picture of reductase evolution, providing evidence that reductases with specificities for related cinnamate substrates independently emerged at least four times. These studies thus establish an exceptionally versatile form of anaerobic respiration that directly links microbial energy metabolism to the gut metabolome.
    Repository Name: EPIC Alfred Wegener Institut
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  • 26
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    Grazing by nano- and microzooplankton on heterotrophic picoplankton dominates the biological carbon cycling around the Western Antarctic Peninsula (2024)
    Springer Nature
    In:  EPIC3Polar Biology, Springer Nature, 47(3), pp. 279-294, ISSN: 0722-4060
    Details
    Publication Date: 2024-04-09
    Description: Over the past 40 years, the significance of microzooplankton grazing in oceanic carbon cycling has been highlighted with the help of dilution experiments. The ecologically relevant Western Antarctic Peninsula (WAP) ecosystem in the Southern Ocean (SO), however, has not been well studied. Here we present data from dilution experiments, performed at three stations around the northern tip of the WAP to determine grazing rates of small zooplankton (hetero- and mixotrophic members of the 0.2–200 µm size fraction, SZP) on auto- and heterotrophic members of the 〈 200 µm plankton community as well as their gross growth. While variable impacts of SZP grazing on carbon cycling were measured, particulate organic carbon, not the traditionally used parameter chlorophyll a, provided the best interpretable results. Our results suggested that heterotrophic picoplankton played a significant role in the carbon turnover at all stations. Finally, a comparison of two stations with diverging characteristics highlights that SZP grazing eliminated 56–119% of gross particulate organic carbon production from the particulate fraction. Thus, SZP grazing eliminated 20–50 times more carbon from the particulate fraction compared to what was exported to depth, therefore significantly affecting the efficiency of the biological carbon pump at these SO sites.
    Repository Name: EPIC Alfred Wegener Institut
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  • 27
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    A review of the tectonic, volcanological and hazard history of Vulcano (Aeolian Islands, Italy) (2024)
    Wiley
    Details
    Publication Date: 2024-04-08
    Description: Vulcano is one of the seven volcanic islands composing the Aeolian Islands archipelago (Southern Italy), which also includes three other active volcanoes. The island was orig-inally a stratovolcano like Stromboli; afterwards, its shape turned towards a complex structure composed of several volcanic landforms of different sizes. This is due to the great variability of the tectonic and volcanic phenomena, presently showing a volcano made by two calderas, a lava dome complex and two small active cones. The largest of them is the tuff cone of La Fossa, hosted in the middle of a 3- km-wide caldera struc-ture (La Fossa caldera), whose borders are visible on the southern and western sides of the island. Its last eruption occurred in 1888–1890. At present, Vulcano is charac-terized by weak shallow seismicity and intense fumarolic activity mainly concentrated within the crater of the La Fossa cone and along its rims during a recent unrest phase started in 2021, and measured with a multiparametric monitoring network.
    Description: Published
    Description: 471-487
    Description: OSV4: Preparazione alle crisi vulcaniche
    Description: JCR Journal
    Keywords: Aeolian Islands, Vulcano ; multihazard ; plumbing system ; unrest ; volcanic history ; stratigraphy ; tectonics ; 04.08. Volcanology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 28
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    Interactive responses to temperature and salinity in larvae of the Asian brush-clawed crab Hemigrapsus takanoi: relevance for range expansion into the Baltic Sea, in the context of climate change (2024)
    Springer Nature
    In:  EPIC3Biological Invasions, Springer Nature, pp. 1-20, ISSN: 1387-3547
    Details
    Publication Date: 2024-04-15
    Description: We studied the potential of a recently introduced species, the Asian brush-clawed crab (Hemigrapsus takanoi), to expand its distribution range further into the Baltic Sea. H. takanoi has been documented in the southwestern Baltic Sea since 2014. The ability to persist and further expand into the Baltic Proper will depend on their potential to sustain all stages of their complex life cycle, including pelagic larvae, under the Baltic Sea's conditions. Range limits may be established by the tolerance to low salinity, which in addition may be affected by water temperature. A key question is whether local populations at the distribution limit (within the Baltic Sea) show increased tolerance to low salinities and hence promote further expansion. We quantified the combined effects of salinity (10–33 PSU) and temperature (15–24 °C) on larval development in four populations of H. takanoi (two from the Baltic and two from the North Sea). We found substantial differences in larval performance between the populations from the Baltic and North Seas. Larvae from the North Sea populations always showed higher survival and faster development compared with those from the Baltic Sea. Only weak evidence of elevated tolerance towards low salinity was found in the larvae from the Baltic Sea populations. In addition, larvae from the population located near the range limit showed very low survival under all tested salinity-temperature combinations and no evidence of increased tolerance to low salinity. There was no apparent genetic differentiation among the studied populations in the mitochondrial cytochrome c oxidase subunit one gene (COI) implying high connectivity among the populations. In conclusion, the weak evidence of low salinity tolerance in Baltic Sea populations, and poor larval performance for the population located near the range limit, coupled with limited genetic differentiation suggest that subsidies are needed for populations to persist near the range limit. Alternatively, ontogenetic migrations would be required to sustain those populations. Monitoring efforts are needed to elucidate the underlaying mechanisms and document potential future range expansions.
    Repository Name: EPIC Alfred Wegener Institut
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  • 29
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    Destructive fishing: An expert‐driven definition and exploration of this quasi‐concept (2024)
    Wiley
    In:  EPIC3Conservation Letters, Wiley, ISSN: 1755-263X
    Details
    Publication Date: 2024-04-17
    Description: 〈jats:title〉Abstract〈/jats:title〉〈jats:p〉Numerous policy and international frameworks consider that “destructive fishing” hampers efforts to reach sustainability goals. Though ubiquitous, “destructive fishing” is undefined and therefore currently immeasurable. Here we propose a definition developed through expert consultation: “Destructive fishing is any fishing practice that causes irrecoverable habitat degradation, or which causes significant adverse environmental impacts, results in long‐term declines in target or nontarget species beyond biologically safe limits and has negative livelihood impacts.” We show strong stakeholder support for a definition, consensus on many biological and ecological dimensions, and no clustering of respondents from different sectors. Our consensus definition is a significant step toward defining sustainable fisheries goals and will help interpret and implement global political commitments which utilize the term “destructive fishing.” Our definition and results will help reinforce the Food and Agricultural Organization's Code of Conduct and meaningfully support member countries to prohibit destructive fishing practices.〈/jats:p〉
    Repository Name: EPIC Alfred Wegener Institut
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  • 30
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    Correction: Plastics in biota: technological readiness level of current methodologies (2024)
    Springer Nature
    In:  EPIC3Microplastics and Nanoplastics, Springer Nature, 4(1), pp. 8-8, ISSN: 2662-4966
    Details
    Publication Date: 2024-04-17
    Repository Name: EPIC Alfred Wegener Institut
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  • 31
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    Plastics in biota: technological readiness level of current methodologies (2024)
    Springer Nature
    In:  EPIC3Microplastics and Nanoplastics, Springer Nature, 4(1), pp. 6-6, ISSN: 2662-4966
    Details
    Publication Date: 2024-04-17
    Description: Plastics are persistent in the environment and may be ingested by organisms where they may cause physical harm or release plastic additives. Monitoring is a crucial mechanism to assess the risk of plastics to the marine and terrestrial ecosystem. Unfortunately, due to unharmonised procedures, it remains difficult to compare the results of different studies. This publication, as part of the Horizon project EUROqCHARM, aims to identify the properties of the available analytical processes and methods for the determination of plastics in biota. Based on a systematic review, reproducible analytical pipelines were examined and the technological readiness levels were assessed so that these methods may eventually (if not already) be incorporated into (harmonised) monitoring programs where biota are identified as indicators of plastic pollution.
    Repository Name: EPIC Alfred Wegener Institut
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  • 32
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    Rectifying misinformation on the climate intervention potential of ocean afforestation (2024)
    Springer Nature
    In:  EPIC3Nature Communications, Springer Nature, 15(1), pp. 3012-3012, ISSN: 2041-1723
    Details
    Publication Date: 2024-04-19
    Repository Name: EPIC Alfred Wegener Institut
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  • 33
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    Spatially heterogeneous shifts in vegetation phenology induced by climate change threaten the integrity of the avian migration network (2024)
    Wiley
    In:  Global Change Biology vol. 30 no. e17148
    Details
    Publication Date: 2024-04-22
    Description: Phenological responses to climate change frequently vary among trophic levels, which can result in increasing asynchrony between the peak energy requirements of consumers and the availability of resources. Migratory birds use multiple habitats with seasonal food resources along migration flyways. Spatially heterogeneous climate change could cause the phenology of food availability along the migration flyway to become desynchronized. Such heterogeneous shifts in food phenology could pose a challenge to migratory birds by reducing their opportunity for food availability along the migration path and consequently influencing their survival and reproduction. We develop a novel graph-based approach to quantify this problem and deploy it to evaluate the condition of the heterogeneous shifts in vegetation phenology for 16 migratory herbivorous waterfowl species in Asia. We show that climate change-induced heterogeneous shifts in vegetation phenology could cause a 12% loss of migration network integrity on average across all study species. Species that winter at relatively lower latitudes are subjected to a higher loss of integrity in their migration network. These findings highlight the susceptibility of migratory species to climate change. Our proposed methodological framework could be applied to migratory species in general to yield an accurate assessment of the exposure under climate change and help to identify actions for biodiversity conservation in the face of climate-related risks.
    Keywords: bird migration ; climate change ; graph-based approach ; heterogeneous shifts ; network integrity ; phenological asynchrony ; vegetation phenology
    Repository Name: National Museum of Natural History, Netherlands
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  • 34
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    Testing the deep‐sea glacial disturbance hypothesis as a cause of low, present‐day Norwegian Sea diversity and resulting steep latitudinal diversity gradient, using fossil records (2024)
    Wiley
    In:  EPIC3Global Ecology and Biogeography, Wiley, ISSN: 1466-822X
    Details
    Publication Date: 2024-04-24
    Description: 〈jats:title〉Abstract〈/jats:title〉〈jats:sec〉〈jats:title〉Aim〈/jats:title〉〈jats:p〉Within the intensively‐studied, well‐documented latitudinal diversity gradient, the deep‐sea biodiversity of the present‐day Norwegian Sea stands out with its notably low diversity, constituting a steep latitudinal diversity gradient in the North Atlantic. The reason behind this has long been a topic of debate and speculation. Most prominently, it is explained by the deep‐sea glacial disturbance hypothesis, which states that harsh environmental glacial conditions negatively impacted Norwegian Sea diversities, which have not yet fully recovered. Our aim is to empirically test this hypothesis. Specific research questions are: (1) Has deep‐sea biodiversity been lower during glacials than during interglacials? 〈jats:italic〉(〈/jats:italic〉2) Was there any faunal shift at the Mid‐Brunhes Event (MBE) when the mode of glacial–interglacial climatic change was altered?〈/jats:p〉〈/jats:sec〉〈jats:sec〉〈jats:title〉Location〈/jats:title〉〈jats:p〉Norwegian Sea, deep sea (1819–2800 m), coring sites MD992277, PS1243, and M23352.〈/jats:p〉〈/jats:sec〉〈jats:sec〉〈jats:title〉Time period〈/jats:title〉〈jats:p〉620.7–1.4 ka (Middle Pleistocene–Late Holocene).〈/jats:p〉〈/jats:sec〉〈jats:sec〉〈jats:title〉Taxa studied〈/jats:title〉〈jats:p〉Ostracoda (Crustacea).〈/jats:p〉〈/jats:sec〉〈jats:sec〉〈jats:title〉Methods〈/jats:title〉〈jats:p〉We empirically test the deep‐sea glacial disturbance hypothesis by investigating whether diversity in glacial periods is consistently lower than diversity in interglacial periods. Additionally, we apply comparative analyses to determine a potential faunal shift at the MBE, a Pleistocene event describing a fundamental shift in global climate.〈/jats:p〉〈/jats:sec〉〈jats:sec〉〈jats:title〉Results〈/jats:title〉〈jats:p〉The deep Norwegian Sea diversity was not lower during glacial periods compared to interglacial periods. Holocene diversity was exceedingly lower than that of the last glacial period. Faunal composition changed substantially between pre‐ and post‐MBE.〈/jats:p〉〈/jats:sec〉〈jats:sec〉〈jats:title〉Main conclusions〈/jats:title〉〈jats:p〉These results reject the glacial disturbance hypothesis, since the low glacial diversity is the important precondition here. The present‐day‐style deep Norwegian Sea ecosystem was established by the MBE, more specifically by MBE‐induced changes in global climate, which has led to more dynamic post‐MBE conditions. In a broader context, this implies that the MBE has played an important role in the establishment of the modern polar deep‐sea ecosystem and biodiversity in general.〈/jats:p〉〈/jats:sec〉
    Repository Name: EPIC Alfred Wegener Institut
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    The 2020 European Seismic Hazard Model: Milestones and Lessons Learned (2023)
    Springer Nature
    Details
    Publication Date: 2023-01-18
    Description: The 2020 update of the European Seismic Hazard Model (ESHM20) is the most recent seismic hazard model of the Euro-Mediterranean region. It was built upon unified and homogenized datasets including earthquake catalogues, active faults, ground motion recordings and state-of-the-art modelling components, i.e. earthquake rates forecast and regionally variable ground motion characteristic models. ESHM20 replaces the 2013 European Seismic Hazard Model (ESHM13), and it is the first regional model to provide two informative hazard maps for the next update of the European Seismic Design Code (CEN EC8). ESHM20 is also one of the key components of the first publicly available seismic risk model for Europe. This chapter provides a short summary of ESHM20 by highlighting its main features and describing some lessons learned during the model’s development.
    Description: Published
    Description: 3-25
    Description: 6T. Studi di pericolosità sismica e da maremoto
    Description: 4IT. Banche dati
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 36
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    How sharp is the knife? Herbivore and carnivore sensitivity to resource stoichiometric quality (2023)
    Wiley
    In:  EPIC3Oikos, Wiley, ISSN: 0030-1299
    Details
    Publication Date: 2023-06-12
    Description: While understanding feeding preferences of herbivores and carnivores is of major importance in ecology, we still know very little on the sensitivity of different functional groups to suboptimal stoichiometric resource quality. Here, we apply concepts of ecological stoichiometry to shed light on differences in the nutritional requirements of herbivores and carnivores, and to make predictions on the influence of suboptimal resource stoichiometric quality on the fitness of these different consumers to. Herbivores generally experience more variation in the quality of their resource than carnivores do, and these differences have likely shaped the extent to which coping mechanisms have evolved. Consequently, we expect 1) herbivores to maintain their stoichiometric homeostasis over a broader range of resource stoichiometry than carnivores, 2) the threshold elemental ratio (TER), i.e. the dietary carbon to nutrient ratio which maximizes fitness, of herbivores to be higher than that of carnivores, 3) a narrower and sharper knife-edge response in carnivores than herbivores and 4) asymmetric knife-edge responses indicating a higher sensitivity to the diet quality that consumers are not used to dealing with, namely nutrient limitation in carnivores and nutrient excess in herbivores. Our study poses that documenting the ranges of resource quality where consumer fitness declines in diverse organisms is a very promising avenue to increase our understanding of community composition and food web functioning.
    Repository Name: EPIC Alfred Wegener Institut
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  • 37
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    Stabilization of mineral-associated organic carbon in Pleistocene permafrost (2023)
    Springer Nature
    In:  EPIC3Nature Communications, Springer Nature, 14, 8 p., ISSN: 2041-1723
    Details
    Publication Date: 2023-04-18
    Description: Ice-rich Pleistocene-age permafrost is particularly vulnerable to rapid thaw, which may quickly expose a large pool of sedimentary organic matter (OM) to microbial degradation and lead to emissions of climate-sensitive greenhouse gases. Protective physico-chemical mechanisms may, however, restrict microbial accessibility and reduce OM decomposition; mechanisms that may be influenced by changing environmental conditions during sediment deposition. Here we study different OM fractions in Siberian permafrost deposited during colder and warmer periods of the past 55,000 years. Among known stabilization mechanisms, the occlusion of OMin aggregates is of minor importance, while 33-74% of the organic carbon is associated with small, 〈6.3 μm mineral particles. Preservation of carbon in mineral-associated OM is enhanced by reactive iron minerals particularly during cold and dry climate, reflected by low microbial CO2 production in incubation experiments. Warmer and wetter conditions reduce OM stabilization, shown by more decomposed mineral-associated OM and up to 30% higher CO2 production. This shows that considering the stability and bioavailability of Pleistocene-age permafrost carbon is important for predicting future climate-carbon feedback.
    Repository Name: EPIC Alfred Wegener Institut
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  • 38
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    Evaluation of Surface Layer Stability Functions and Their Extension to First Order Turbulent Closures for Weakly and Strongly Stratified Stable Boundary Layer (2023)
    Springer Nature
    In:  EPIC3Boundary-Layer Meteorology, Springer Nature, ISSN: 0006-8314
    Details
    Publication Date: 2023-04-25
    Description: In this study, we utilize a generalization of Monin–Obukhov similarity theory to construct first order turbulent closures for single-column models of the atmospheric boundary layer (ABL). A set of widely used universal functions for dimensionless gradients is evaluated. Two test cases based on Large-Eddy Simulations (LES) experimental setups are considered – weakly stable ABL (GABLS1; Beare et al. in Bound Layer Meteorol 118(2):247–272,2006), and very strongly stratified ABL (van der Linden et al. in Bound Layer Meteorol 173(2):165–192, 2019). The comparison shows that approximations obtained using a linear dimensionless velocity gradient tend to match the LES data more closely. In particular, the EFB (Energy- and Flux- Budget) closure proposed by Zilitinkevich et al. (Bound Layer Meteorol 146(3):341–373, 2013) has the best performance for the tests considered here. We also test surface layer “bulk formulas” based on these universal functions. The same LES data are utilized for comparison. The setup showcases the behavior of surface scheme, when one assumes that the velocity and temperature profiles in ABL are represented correctly. The advantages and disadvantages of different surface schemes are revealed.
    Repository Name: EPIC Alfred Wegener Institut
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  • 39
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    Crystal orientation fabric anisotropy causes directional hardening of the Northeast Greenland Ice Stream (2023)
    Springer Nature
    In:  EPIC3Nature Communications, Springer Nature, 14(1), pp. 2653-2653, ISSN: 2041-1723
    Details
    Publication Date: 2023-10-19
    Description: The dynamic mass loss of ice sheets constitutes one of the biggest uncertainties in projections of ice-sheet evolution. One central, understudied aspect of ice flow is how the bulk orientation of the crystal orientation fabric translates to the mechanical anisotropy of ice. Here we show the spatial distribution of the depth-averaged horizontal anisotropy and corresponding directional flow-enhancement factors covering a large area of the Northeast Greenland Ice Stream onset. Our results are based on airborne and ground-based radar surveys, ice-core observations, and numerical ice-flow modelling. They show a strong spatial variability of the horizontal anisotropy and a rapid crystal reorganisation on the order of hundreds of years coinciding with the ice-stream geometry. Compared to isotropic ice, parts of the ice stream are found to be more than one order of magnitude harder for along-flow extension/compression while the shear margins are potentially softened by a factor of two for horizontal-shear deformation.
    Repository Name: EPIC Alfred Wegener Institut
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  • 40
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    A phase field model for fractures in ice shelves (2023)
    Wiley
    In:  EPIC3PAMM, Wiley, 22(1), ISSN: 1617-7061
    Details
    Publication Date: 2023-10-24
    Description: 〈jats:title〉Abstract〈/jats:title〉〈jats:p〉Ice shelves are large floating ice masses, that are formed when glaciers are becoming afloat at the margin of ice sheets. One dominating mass loss mechanism of ice shelves is calving, describing the detachment of icebergs at the front. Ice shelves stabilize inland ice glaciers due to buttressing. If the stabilizing effect of an ice shelf vanishes because of disintegration or thinning, the corresponding glacier accelerates resulting in sea level rise.〈/jats:p〉〈jats:p〉To describe calving and disintegration of ice shelves, it is important to investigate fracture propagation in ice. A powerful method in fracture mechanics is the phase field method which is based on Griffith's theory. It approximates cracks in a diffuse manner by using a continuous scalar field. We propose a phase field fracture model for ice considering its characteristic material properties. The material behavior of ice depends on the considered time scales. On short time scales it behaves like a solid and while it acts like a fluid on long time scales, which classifies it as a viscoelastic material of Maxwell type. This has been verified by observations. The phase field method allows us to simulate typical fracture situations of ice shelves in Antarctica and Greenland.〈/jats:p〉
    Repository Name: EPIC Alfred Wegener Institut
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  • 41
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    Principles for transformative ocean governance (2023)
    Springer Nature
    In:  EPIC3Nature Sustainability, Springer Nature, pp. 1-13, ISSN: 2398-9629
    Details
    Publication Date: 2023-10-30
    Description: With a focus on oceans, we collaborated across ecological, social and legal disciplines to respond to the United Nations call for transformation in the ‘2030 Agenda for Sustainable Development’. We developed a set of 13 principles that strategically and critically connect transformative ocean research to transformative ocean governance (complementing the UN Decade for Ocean Science). We used a rigorous, iterative and transparent consensus-building approach to define the principles, which can interact in supporting, neutral or sometimes conflicting ways. We recommend that the principles could be applied as a comprehensive set and discuss how to learn from their interactions, particularly those that reveal hidden tensions. The principles can bring and keep together partnerships for innovative ocean action. This action must respond to the many calls to reform current ocean-use practices which are based on economic growth models that have perpetuated inequities and fuelled conflict and environmental decline.
    Repository Name: EPIC Alfred Wegener Institut
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  • 42
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    The impact of salps (Salpa thompsoni) on the Antarctic krill population (Euphausia superba): an individual-based modelling study (2023)
    Springer Nature
    In:  EPIC3Ecological Processes, Springer Nature, 12(1), pp. 50-50, ISSN: 2192-1709
    Details
    Publication Date: 2023-11-23
    Description: Krill (Euphausia superba) and salps (Salpa thompsoni) are key macrozooplankton grazers in the Southern Ocean ecosystem. However, due to differing habitat requirements, both species previously exhibited little spatial overlap. With ongoing climate change-induced seawater temperature increase and regional sea ice loss, salps can now extend their spatial distribution into historically krill-dominated areas and increase rapidly due to asexual reproduction when environmental conditions are favorable. Understanding the potential effects on krill is crucial, since krill is a species of exceptional trophic significance in the Southern Ocean food web. Negative impacts on krill could trigger cascading effects on its predators and prey. To address this question, we combined two individual-based models on salps and krill, which describe the whole life cycle of salp individuals and the dynamic energy budget of individual krill. The resulting new model PEKRIS (PErformance of KRIll vs. Salps) simulates a krill population for 100 years under varying chlorophyll-a concentrations in the presence or absence of salps. All of the investigated krill population properties (abundance, mean length, and yearly egg production) were significantly impacted by the presence of salps. On the other hand, salp density was not impacted if krill were present. The medians of krill population properties deviated during variable maximum chlorophyll-a density per year when salps were introduced by − 99.9% (− 234 individuals per 1000 m3) for krill density, − 100% (− 22,062 eggs per 1000 m3) for krill eggs and − 0.9% (− 0.3 mm) for mean length of krill. If both species compete for the same food resource in a closed space, salps seem to inhibit krill populations. Further simulation studies should investigate whether this effect prevails if different phytoplankton sizes and consumption preferences of krill are implemented. Furthermore, direct predation of the two species or consumption of krill fecal pellets by salps could change the impact size of the food competition.
    Repository Name: EPIC Alfred Wegener Institut
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  • 43
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    Metagenome-assembled genomes reveal greatly expanded taxonomic and functional diversification of the abundant marine Roseobacter RCA cluster (2023)
    Springer Nature
    In:  EPIC3Microbiome, Springer Nature, ISSN: 2049-2618
    Details
    Publication Date: 2023-11-25
    Description: Background The RCA (Roseobacter clade affiliated) cluster belongs to the family Roseobacteracea and represents a major Roseobacter lineage in temperate to polar oceans. Despite its prevalence and abundance, only a few genomes and one described species, Planktomarina temperata, exist. To gain more insights into our limited understanding of this cluster and its taxonomic and functional diversity and biogeography, we screened metagenomic datasets from the global oceans and reconstructed metagenome-assembled genomes (MAG) affiliated to this cluster. Results The total of 82 MAGs, plus five genomes of isolates, reveal an unexpected diversity and novel insights into the genomic features, the functional diversity, and greatly refined biogeographic patterns of the RCA cluster. This cluster is subdivided into three genera: Planktomarina, Pseudoplanktomarina, and the most deeply branching Candidatus Paraplanktomarina. Six of the eight Planktomarina species have larger genome sizes (2.44–3.12 Mbp) and higher G + C contents (46.36–53.70%) than the four Pseudoplanktomarina species (2.26–2.72 Mbp, 42.22–43.72 G + C%). Cand. Paraplanktomarina is represented only by one species with a genome size of 2.40 Mbp and a G + C content of 45.85%. Three novel species of the genera Planktomarina and Pseudoplanktomarina are validly described according to the SeqCode nomenclature for prokaryotic genomes. Aerobic anoxygenic photosynthesis (AAP) is encoded in three Planktomarina species. Unexpectedly, proteorhodopsin (PR) is encoded in the other Planktomarina and all Pseudoplanktomarina species, suggesting that this light-driven proton pump is the most important mode of acquiring complementary energy of the RCA cluster. The Pseudoplanktomarina species exhibit differences in functional traits compared to Planktomarina species and adaptations to more resource-limited conditions. An assessment of the global biogeography of the different species greatly expands the range of occurrence and shows that the different species exhibit distinct biogeographic patterns. They partially reflect the genomic features of the species. Conclusions Our detailed MAG-based analyses shed new light on the diversification, environmental adaptation, and global biogeography of a major lineage of pelagic bacteria. The taxonomic delineation and validation by the SeqCode nomenclature of prominent genera and species of the RCA cluster may be a promising way for a refined taxonomic identification of major prokaryotic lineages and sublineages in marine and other prokaryotic communities assessed by metagenomics approaches.
    Repository Name: EPIC Alfred Wegener Institut
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  • 44
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    Higher temperature, increased CO2, and changing nutrient ratios alter the carbon metabolism and induce oxidative stress in a cosmopolitan diatom (2023)
    Wiley
    In:  EPIC3Limnology and Oceanography, Wiley, ISSN: 0024-3590
    Details
    Publication Date: 2023-12-11
    Description: Phytoplankton are responsible for about 90% of the oceanic primary production, largely supporting marine food webs, and actively contributing to the biogeochemical cycling of carbon. Yet, increasing temperature and pCO2, along with higher dissolved nitrogen: phosphorus ratios in coastal waters are likely to impact phytoplankton physiology, especially in terms of photosynthetic rate, respiration, and dissolved organic carbon (DOC) production. Here, we conducted a full-factorial experiment to identify the individual and combined effects of temperature, pCO2, and N : P ratio on the antioxidant capacity and carbon metabolism of the diatom Phaeodactylum tricornutum. Our results demonstrate that, among these three drivers, temperature is the most influential factor on the physiology of this species, with warming causing oxidative stress and lower activity of antioxidant enzymes. Furthermore, the photosynthetic rate was higher under warmer conditions and higher pCO2, and, together with a lower dark respiration rate and higher DOC exudation, generated cells with lower carbon content. An enhanced oceanic CO2 uptake and an overall stimulated microbial loop benefiting from higher DOC exudation are potential longer-term consequences of rising temperatures, elevated pCO2 as well as shifted dissolved N : P ratios.
    Repository Name: EPIC Alfred Wegener Institut
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  • 45
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    Capturing drifting species and molecules—Lessons learned from integrated approaches to assess marine metazoan diversity in highly dynamic waters (2023)
    Wiley
    In:  EPIC3Environmental DNA, Wiley, ISSN: 2637-4943
    Details
    Publication Date: 2023-12-11
    Description: Marine community diversity surveys require a reliable assessment to estimate ecosystem functions and their dynamics. For these, non-invasive environmental DNA (eDNA) metabarcoding is increasingly applied in zoological studies to complement or even replace traditional morphological identification methods. However, uncertainties remain about the accuracy of the diversity detected with eDNA to capture the actual diversity in the field. Here, we validate the reliability of eDNA metabarcoding in identifying metazoan biodiversity in highly dynamic marine waters of the North Sea. We analyzed biodiversity from water (eDNA) and zooplankton samples with cytochrome c oxidase subunit 1 (COI) and 18S rRNA (18S) metabarcoding at Helgoland Roads and validated the optimal molecular resolution by morphological and molecular zooplankton identification (metabarcoding) with the result of merely a few false-negative detections. eDNA and zooplankton metabarcoding resolved 354 species from all major and in total 16 metazoan phyla. This molecular genetic species inventory overlapped by 95.9% (COI) and 81.9% (18S) with published inventories of local, morphologically identified species, among them neozoa and rediscovered species. Even though half of all species were detected by both eDNA and zooplankton metabarcoding, the methods differed significantly in their detected diversity. eDNA metabarcoding performed very well in cnidarians and annelids, whereas zooplankton metabarcoding identified higher numbers of fish and malacostraca. Species assemblages significantly differed between the individual sampling events and the cumulative number of identified species increased steadily over the sampling period and did not reach saturation. About a third of the species were detected only once while a core community of 22 species was identified continuously. Our study confirms eDNA metabarcoding to be a powerful tool to identify and analyze North Sea fauna in highly dynamic waters and we recommend investing in high sampling efforts by repetitive sampling and replication using at least 0.45 μm filters to increase filtration volume.
    Repository Name: EPIC Alfred Wegener Institut
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  • 46
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    When the going gets tough, the tough get going: effect of extreme climate on an Antarctic seabird’s life history (2023)
    Wiley
    Details
    Publication Date: 2023-02-21
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Jenouvrier, S., Aubry, L., van Daalen, S., Barbraud, C., Weimerskirch, H., & Caswell, H. When the going gets tough, the tough get going: effect of extreme climate on an Antarctic seabird’s life history. Ecology Letters, 25, (2022): 2120– 2131, https://doi.org/10.1111/ele.14076.
    Description: Individuals differ in many ways. Most produce few offspring; a handful produce many. Some die early; others live to old age. It is tempting to attribute these differences in outcomes to differences in individual traits, and thus in the demographic rates experienced. However, there is more to individual variation than meets the eye of the biologist. Even among individuals sharing identical traits, life history outcomes (life expectancy and lifetime reproduction) will vary due to individual stochasticity, that is to chance. Quantifying the contributions of heterogeneity and chance is essential to understand natural variability. Interindividual differences vary across environmental conditions, hence heterogeneity and stochasticity depend on environmental conditions. We show that favourable conditions increase the contributions of individual stochasticity, and reduce the contributions of heterogeneity, to variance in demographic outcomes in a seabird population. The opposite is true under poor conditions. This result has important consequence for understanding the ecology and evolution of life history strategies.
    Description: We acknowledge Institute Paul Emile Victor (Programme IPEV 109), and Terres Australes et Antarctiques Françaises for logistical and financial support in Terre Adélie. The study is a contribution to the Program EARLYLIFE funded by a European Research Council Advanced Grant under the European Community's Seven Framework Program FP7/2007-2013 (Grant Agreement ERC-2012-ADG_20120314 to Henri Weimerskirch), to the program SENSEI funded by the BNP Paribas Foundation, and to the Program INDSTOCH funded by ERC Advanced Grant 322989 to Hal Caswell. SJ acknowledges support from Ocean Life Institute and WHOI Unrestricted funds, and NSF projects DEB-1257545, OPP-1246407 and OPP-1840058.
    Keywords: Fixed heterogeneity ; Frailty ; Individual quality ; Individual stochasticity ; Unobserved individual heterogeneity ; SICs
    Repository Name: Woods Hole Open Access Server
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  • 47
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    Alpine subduction zone metamorphism in the Palaeozoic successions of the Monti Romani (Northern Apennines, Italy) (2023)
    Wiley
    Details
    Publication Date: 2023-02-21
    Description: The hinterland of the Cenozoic Northern Apennines fold-and-thrust belt exposes the metamorphic roots of the chain, vestiges of the subduction-related tectono-metamorphic evolution that led to the buildup of the Alpine orogeny in the Mediterranean region. Like in other peri-Mediterranean belts, the tectono-metamorphic evolution of the Palaeozoic continental basement in the Apennines is still poorly constrained, hampering the full understanding of their Alpine orogenic evolution. We report the first comprehensive tectono-metamorphic study of the low-grade metasedimentary (metapsammite/metapelite) succession of the Monti Romani Complex (MRC) that formed after Palaeozoic protoliths and constitutes the southernmost exposure of the metamorphic domain of the Northern Apennines. By integrating fieldwork with microstructural studies, Raman spectroscopy on carbonaceous material and thermodynamic modelling, we show that the MRC preserves a D1/M1 Alpine tectono-metamorphic evolution developed under HP–LT conditions (~1.0–1.1 GPa at T ~ 400°C) during a non-coaxial, top-to-the-NE, crustal shortening regime. Evidence for HP–LT metamorphism is generally cryptic within the MRC, dominated by graphite-bearing assemblages with the infrequent blastesis of muscovite ± chlorite ± chloritoid ± paragonite parageneses, equilibrated under cold palaeo-geothermal conditions (~10°C/km). Results of this study allow extending to the MRC the signature of subduction zone metamorphism already documented in the hinterland of the Apennine orogen, providing further evidence of the syn-orogenic ductile exhumation of the HP units in the Apennine belt. Finally, we discuss the possible role of fluid-mediated changes in the reactive bulk rock composition on mineral blastesis during progress of regional deformation and metamorphism at low-grade conditions.
    Description: Published
    Description: 919-953
    Description: 2TR. Ricostruzione e modellazione della struttura crostale
    Description: JCR Journal
    Keywords: Adria Paleozoic basement ; alpine orogeny ; chloritoid ; subduction metamorphism ; Northern Appennines ; 04.01. Earth Interior
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 48
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    Are CO2 ‐rich seafloor pockmarks a suitable environment for ostracod assemblages? The example of the Zannone Giant Pockmark (central‐eastern Tyrrhenian) (2023)
    Wiley
    Details
    Publication Date: 2023-03-24
    Description: Despite their high abundance and diversity, ostracods adapted to a particular chemosynthetic environment and its surroundings have rarely been studied. Therefore, the thresholds and environmental characteristics shaping their assemblages are poorly known. Here, we report a detailed study of the ostracod assemblages occurring around the Zannone Giant Pockmark, a CO2 hydrothermal vent system recently discovered in the central-eastern Tyrrhenian Sea. Although among crustaceans, ostracods seem to have the longest stratigraphic record in fossil seeps and hydrothermal vents starting in the Palaeozoic, our results indicate that their occurrence is driven by CO2 that represents an insurmountable threshold for ostracods’ life.
    Description: Published
    Description: e12698
    Description: 5V. Processi eruttivi e post-eruttivi
    Description: JCR Journal
    Keywords: CaCO3 undersaturated waters ; circalittoral ; hydrothermal vents ; Mediterranean Sea
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 49
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    Microbial methane cycling in sediments of Arctic thermokarst lagoons (2023)
    Wiley
    In:  EPIC3Global Change Biology, Wiley, pp. 2714-2731, ISSN: 1354-1013
    Details
    Publication Date: 2023-04-14
    Description: Thermokarst lagoons represent the transition state from a freshwater lacustrine to a marine environment, and receive little attention regarding their role for greenhouse gas production and release in Arctic permafrost landscapes. We studied the fate of methane (CH4) in sediments of a thermokarst lagoon in comparison to two thermokarst lakes on the Bykovsky Peninsula in northeastern Siberia through the analysis of sediment CH4 concentrations and isotopic signature, methane-cycling microbial taxa, sediment geochemistry, lipid biomarkers, and network analysis. We assessed how differences in geochemistry between thermokarst lakes and thermokarst lagoons, caused by the infiltration of sulfate-rich marine water, altered the microbial methane-cycling community. Anaerobic sulfate-reducing ANME-2a/2b methanotrophs dominated the sulfate-rich sediments of the lagoon despite its known seasonal alternation between brackish and freshwater inflow and low sulfate concentrations compared to the usual marine ANME habitat. Non-competitive methylotrophic methanogens dominated the methanogenic community of the lakes and the lagoon, independent of differences in porewater chemistry and depth. This potentially contributed to the high CH4 concentrations observed in all sulfate-poor sediments. CH4 concentrations in the freshwater-influenced sediments averaged 1.34 ± 0.98 μmol g−1, with highly depleted δ13C-CH4 values ranging from −89‰ to −70‰. In contrast, the sulfate-affected upper 300 cm of the lagoon exhibited low average CH4 concentrations of 0.011 ± 0.005 μmol g−1 with comparatively enriched δ13C-CH4 values of −54‰ to −37‰ pointing to substantial methane oxidation. Our study shows that lagoon formation specifically supports methane oxidizers and methane oxidation through changes in pore water chemistry, especially sulfate, while methanogens are similar to lake conditions.
    Repository Name: EPIC Alfred Wegener Institut
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  • 50
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    Climate Evolution through the onset and intensification of Northern Hemisphere Glaciation (2023)
    Wiley
    In:  EPIC3Reviews of Geophysics, Wiley, 74 p., pp. 1-74, ISSN: 8755-1209
    Details
    Publication Date: 2023-07-10
    Description: The Pliocene Epoch (∼5.3-2.6 million years ago, Ma) was characterized by a warmer than present climate with smaller Northern Hemisphere ice sheets, and offers an example of a climate system in long-term equilibrium with current or predicted near-future atmospheric CO2 concentrations (pCO2). A long-term trend of ice-sheet expansion led to more pronounced glacial (cold) stages by the end of the Pliocene (∼2.6 Ma), known as the “intensification of Northern Hemisphere Glaciation” (iNHG). We assessed the spatial and temporal variability of ocean temperatures and ice-volume indicators through the late Pliocene and early Pleistocene (from 3.3 to 2.4 Ma) to determine the character of this climate transition. We identified asynchronous shifts in long-term means and the pacing and amplitude of shorter-term climate variability, between regions and between climate proxies. Early changes in Antarctic glaciation and Southern Hemisphere ocean properties occurred even during the mid-Piacenzian warm period (∼3.264-3.025 Ma) which has been used as an analogue for future warming. Increased climate variability subsequently developed alongside signatures of larger Northern Hemisphere ice sheets (iNHG). Yet, some regions of the ocean felt no impact of iNHG, particularly in lower latitudes. Our analysis has demonstrated the complex, non-uniform and globally asynchronous nature of climate changes associated with the iNHG. Shifting ocean gateways and ocean circulation changes may have pre-conditioned the later evolution of ice sheets with falling atmospheric pCO2. Further development of high-resolution, multi-proxy reconstructions of climate is required so that the full potential of the rich and detailed geological records can be realized.
    Repository Name: EPIC Alfred Wegener Institut
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  • 51
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    The role of systematics for understanding ecosystem functions: Proceedings of the Zoologica Scripta Symposium, Oslo, Norway, 25 August 2022 (2023)
    Wiley
    In:  EPIC3Zoologica Scripta, Wiley, ISSN: 0300-3256
    Details
    Publication Date: 2023-07-06
    Repository Name: EPIC Alfred Wegener Institut
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  • 52
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    Novel insights into the sea level evolution along the coast of Bozburun Peninsula (Turkey): A study on submerged Bronze Age harbor in Çamçalık (2023)
    Wiley
    Details
    Publication Date: 2023-05-25
    Description: A recent discovery of a Bronze Age harbor site in Çamçalık provides new data for the relative sea level history along the coast of the Bozburun Peninsula over the last 3600 years. In this study, we compared the new and previously published data from nearby sites to determine the long-term relative sea level changes. Further comparison of the observed sea level data and newly produced glacial isostatic adjustment (GIA) models clarified the tectonic contribution to the relative sea level changes. Our results suggest a nonlinear tectonic subsidence trend in the coastal zone since 3600 B.P. The increase in the relative sea level accelerated over the last 1400 years, mostly due to the seismic events controlled by the tectonic regime of the southeastern Aegean Sea. We can conclude that, as in the past, this active tectonic process will have a major impact on the future sea level evolution of the coastal sector of the Bozburun Peninsula. Notably, our study can be used to understand the historical trend of sea level rise while providing a foundation for future trend prediction.
    Description: Published
    Description: 246-260
    Description: 4A. Oceanografia e clima
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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    Magma reservoir growth and ground deformation preceding the 79 CE Plinian eruption of Vesuvius (2023)
    Springer Nature
    Details
    Publication Date: 2023-07-03
    Description: The 79 CE eruption of Vesuvius is the first documented Plinian eruption, also famous for the archaeological ruins of Pompeii and Herculaneum. Although much is known regarding the eruption dynamics and magma reservoir, little is known about the reservoir shape and growth, and related ground deformation. Numerical modelling by Finite Element Method was carried out, aimed at simulating the reservoir growth and ground deformation with respect to the reservoir shape (prolate, spherical, oblate) and magma overpressure. The modelling was tuned with volcanological, petrological and paleoenvironmental ground deformation con straints. Results indicate that the highest magma overpressure is achieved considering a prolate reservoir, making it as the most likely shape that led to eruption. Similar deformations but lower overpressures are obtained considering spherical and oblate reservoirs. These results demonstrate that ground deformation may not be indicative of eruption probability, style/size, and this has direct implications on surveillance at active explosive volcanoes
    Description: Published
    Description: 211
    Description: 2V. Struttura e sistema di alimentazione dei vulcani
    Description: 4V. Processi pre-eruttivi
    Description: JCR Journal
    Keywords: Pompeii eruption ; ground deformation ; surveillance ; magma reservoir
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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    Omnipresent authigenic calcite distorts Arctic radiocarbon chronology (2023)
    Springer Nature
    In:  EPIC3Communications Earth & Environment, Springer Nature, 4(1), pp. 136-136, ISSN: 2662-4435
    Details
    Publication Date: 2023-09-06
    Description: As calcareous foraminifera precipitate their shells from the surrounding water mass, they are the basis of most marine radiocarbon chronologies and paleo-proxies. Nevertheless, post-mortem alteration of shells, especially addition of authigenic calcite, impact proxy records. In the Arctic Ocean, authigenic calcite overgrowth on foraminifera has been attributed to hydrocarbon release, with a single report on 13C-enriched authigenic calcite, indicating a different carbon source. Here, we use comparative radiocarbon, carbon and oxygen isotope measurements to show that this 13C-enriched authigenic calcite impacts a large proportion of Holocene and the majority of last glacial planktonic foraminifera in the Arctic Basin. This authigenic precipitated calcite is 14C-depleted, so overgrowth results in invariably older 14C-ages. We show that, in comparison with published data, the true chronology of Arctic basin sediments can deviate by more than 10,000 years in critical parts of the last deglaciation and that stable oxygen and carbon isotopes, as likely all calcite-based proxy-records are affected with potential implications for paleoclimate models.
    Repository Name: EPIC Alfred Wegener Institut
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  • 55
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    Ice wedge polygon stability on steep slopes in West Greenland related to temperature and moisture dynamics of the active layer (2023)
    Wiley
    In:  EPIC3Permafrost and Periglacial Processes, Wiley, 34(2), pp. 194-207, ISSN: 1045-6740
    Details
    Publication Date: 2023-08-28
    Description: Ice wedge polygons on steep slopes have generally been described as being covered by periglacial sediments and, typically, the active layer on slopes becomes mobile during thaw periods, which can lead to solifluction. In West Greenland close to the ice margin, however, the active layer and ice wedge polygons are stable despite their occurrence on steep slopes with inclinations of ≥30°. We conducted a soil survey (including sampling for soil analyses and radiocarbon dating) in the Umimmalissuaq valley and installed a field station ~4 km east of the current ice margin to monitor soil temperature and water tension at depths of 10, 20 and 35 cm of the active layer on a steep, north-facing slope in the middle of an ice wedge polygon from 2009 to 2015. Thawing and freezing periods lasted between 2 and 3 months and the active layer was usually completely frozen from November to April. We observed simultaneous and complete water saturation at all three depths of the active layer in one summer for 1 day. The amount of water in the active layer apparently was not enough to trigger solifluction during the summer thaw, even at slope inclinations above 30°. In addition, the dense shrub tundra absorbs most of the water during periods between thawing and freezing, which further stabilizes the slope. This process, together with the dry and continental climate caused by katabatic winds combined with no or limited frost heave, plays a crucial role in determining the stability of these slopes and can explain the presence of large-scale stable ice wedge polygon networks in organic matter-rich permafrost, which is about 5,000 years old. This study underlines the importance of soil hydrodynamics and local climate regime for landscape stability and differing intensities of solifluction processes in areas with strong geomorphological gradients and rising air temperatures.
    Repository Name: EPIC Alfred Wegener Institut
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  • 56
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    Abrupt and acclimation responses to changing temperature elicit divergent physiological effects in the diatom Phaeodactylum tricornutum (2023)
    Wiley
    In:  EPIC3New Phytologist, Wiley, 239(3), pp. 1005-1013, ISSN: 0028-646X
    Details
    Publication Date: 2023-08-29
    Description: Growth rates and other biomass traits of phytoplankton are strongly affected by temperature. We hypothesized that resulting phenotypes originate from deviating temperature sensitivities of underlying physiological processes. We used membrane-inlet mass spectrometry to assess photosynthetic and respiratory O2 and CO2 fluxes in response to abrupt temperature changes as well as after acclimation periods in the diatom Phaeodactylum tricornutum. Abrupt temperature changes caused immediate over- or undershoots in most physiological processes, that is, photosynthetic oxygen release ((Figure presented.)), photosynthetic carbon uptake ((Figure presented.)), and respiratory oxygen release ((Figure presented.)). Over acclimation timescales, cells were, however, able to re-adjust their physiology and revert to phenotypic ‘sweet spots’. Respiratory CO2 release ((Figure presented.)) was generally inhibited under high temperature and stimulated under low-temperature settings, on abrupt as well as acclimation timescales. Such behavior may help mitochondria to stabilize plastidial ATP : NADPH ratios and thus maximize photosynthetic carbon assimilation.
    Repository Name: EPIC Alfred Wegener Institut
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  • 57
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    Trends and variability in the ocean carbon sink (2023)
    Springer Nature
    In:  EPIC3Nature Reviews Earth & Environment, Springer Nature, 4(2), pp. 119-134, ISSN: 2662-138X
    Details
    Publication Date: 2023-09-04
    Description: The ocean has absorbed 25 ± 2% of the total anthropogenic CO2 emissions from the early 1960s to the late 2010s, with rates more than tripling over this period and with a mean uptake of –2.7 ± 0.3 Pg C year–1 for the period 1990 through 2019. This growth of the ocean sink matches expectations based on the increase in atmospheric CO2, but research has shown that the sink is more variable than long assumed. In this Review, we discuss trends and variations in the ocean carbon sink. The sink stagnated during the 1990s with rates hovering around –2 Pg C year–1, but strengthened again after approximately 2000, taking up around –3 Pg C year–1 for 2010–2019. The most conspicuous changes in uptake occurred in the high latitudes, especially the Southern Ocean. These variations are caused by changes in weather and climate, but a volcanic eruption-induced reduction in the atmospheric CO2 growth rate and the associated global cooling contributed as well. Understanding the variability of the ocean carbon sink is crucial for policy making and projecting its future evolution, especially in the context of the UN Framework Convention on Climate Change stocktaking activities and the deployment of CO2 removal methods. This goal will require a global-level effort to sustain and expand the current observational networks and to better integrate these observations with models.
    Repository Name: EPIC Alfred Wegener Institut
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  • 58
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    Making the UN Ocean Decade work? The potential for, and challenges of, transdisciplinary research and real‐world laboratories for building towards ocean solutions (2023)
    Wiley
    In:  EPIC3People and Nature, Wiley, 5(1), pp. 21-33, ISSN: 2575-8314
    Details
    Publication Date: 2023-10-12
    Description: Due to the strong interconnectedness between the ocean and our societies worldwide, improved ocean governance is essential for sustainable development in the context of the UN Ocean Decade. However, a multitude of different perspectives—ecological, societal, political, economic—and relations between these have to be understood and taken into consideration to foster transformative pathways towards marine sustainability. A core challenge that we are facing is that the ‘right’ response to complex societal issues cannot be known beforehand as abilities to predict complex systems are limited. Consequently, societal transformation is necessarily a journey towards the unknown and therefore requires experimental approaches that must enable the involvement of everyone with stakes in the future of our marine environment and its resources. A promising transdisciplinary research method that fulfils both criteria—being participatory and experimental—are real-world laboratories. Here, we discuss how real-world labs can serve as an operational framework in the context of the Ocean Decade by facilitating and guiding successful knowledge exchange at the interface of science and society. The core element of real-world labs is transdisciplinary experimentation to jointly develop potential strategies leading to targeted real-world interventions, essential for achieving the proposed ‘Decade Outcomes’. The authors specifically illustrate how deploying the concept of real-world labs can be advantageous when having to deal with multiple, overlapping challenges in the context of ocean governance and the blue economy. Altogether, we offer a first major contribution to synthesizing knowledge on the potentials of marine real-world labs, considering how they act as a way of exploring options for sustainable ocean futures. Indeed, in the marine context, real-world labs are still under-explored but are a tangible way for addressing the societal challenges of working towards sustainability transformations over the coming UN Ocean Decade and beyond. Read the free Plain Language Summary for this article on the Journal blog.
    Repository Name: EPIC Alfred Wegener Institut
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    Dissimilarity analysis based on diffusion maps (2023)
    Wiley
    In:  EPIC3Oikos, Wiley, ISSN: 0030-1299
    Details
    Publication Date: 2023-09-27
    Description: 〈jats:p〉Compositional measurements from species assemblages define a high dimensional dataspace in which the data can form complex structures, termed manifolds. Comparing assemblages in this dataspace is difficult because the data is often sparse relative to its dimensionality and the complex structure of the manifold introduces bias and error in measurements of distance. Here, we apply diffusion maps, a manifold learning method, to find and characterize manifolds in high‐dimensional compositional data. We show that diffusion maps embed the data in reduced dimensions in which the Euclidean distance between data points approximates the distance between them along the manifold. This is especially useful when species turnover is high, as it provides a way to measure meaningful distances between assemblages even when they harbor disjoint sets of species. We anticipate diffusion maps will therefore be particularly useful for characterizing community change over large spatial and temporal scales.〈/jats:p〉
    Repository Name: EPIC Alfred Wegener Institut
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  • 60
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    Capacity of deep‐sea corals to obtain nutrition from cold seeps aligned with microbiome reorganization (2023)
    Wiley
    In:  EPIC3Global Change Biology, Wiley, 29(1), pp. 189-205, ISSN: 1354-1013
    Details
    Publication Date: 2023-10-02
    Description: Cold seeps in the deep sea harbor various animals that have adapted to utilize seepage chemicals with the aid of chemosynthetic microbes that serve as primary producers. Corals are among the animals that live near seep habitats and yet, there is a lack of evidence that corals gain benefits and/or incur costs from cold seeps. Here, we focused on Callogorgia delta and Paramuricea sp. type B3 that live near and far from visual signs of currently active seepage at five sites in the deep Gulf of Mexico. We tested whether these corals rely on chemosynthetically-derived food in seep habitats and how the proximity to cold seeps may influence; (i) coral colony traits (i.e., health status, growth rate, regrowth after sampling, and branch loss) and associated epifauna, (ii) associated microbiome, and (iii) host transcriptomes. Stable isotope data showed that many coral colonies utilized chemosynthetically derived food, but the feeding strategy differed by coral species. The microbiome composition of C. delta, unlike Paramuricea sp., varied significantly between seep and non-seep colonies and both coral species were associated with various sulfur-oxidizing bacteria (SUP05). Interestingly, the relative abundances of SUP05 varied among seep and non-seep colonies and were strongly correlated with carbon and nitrogen stable isotope values. In contrast, the proximity to cold seeps did not have a measurable effect on gene expression, colony traits, or associated epifauna in coral species. Our work provides the first evidence that some corals may gain benefits from living near cold seeps with apparently limited costs to the colonies. Cold seeps provide not only hard substrate but also food to cold-water corals. Furthermore, restructuring of the microbiome communities (particularly SUP05) is likely the key adaptive process to aid corals in utilizing seepage-derived carbon. This highlights that those deep-sea corals may upregulate particular microbial symbiont communities to cope with environmental gradients.
    Repository Name: EPIC Alfred Wegener Institut
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    Perspectives of species identification by MALDI‐TOF MS in monitoring—Stability of proteomic fingerprints in marine epipelagic copepods (2023)
    Wiley
    In:  EPIC3Molecular Ecology Resources, Wiley, 23(5), pp. 1077-1091, ISSN: 1755-098X
    Details
    Publication Date: 2023-10-23
    Description: We analysed the robustness of species identification based on proteomic composition to data processing and intraspecific variability, specificity and sensitivity of species-markers as well as discriminatory power of proteomic fingerprinting and its sensitivity to phylogenetic distance. Our analysis is based on MALDI-TOF MS (matrix-assisted laser desorption ionization time of flight mass spectrometry) data from 32 marine copepod species coming from 13 regions (North and Central Atlantic and adjacent seas). A random forest (RF) model correctly classified all specimens to the species level with only small sensitivity to data processing, demonstrating the strong robustness of the method. Compounds with high specificity showed low sensitivity, that is identification was based on complex pattern-differences rather than on presence of single markers. Proteomic distance was not consistently related to phylogenetic distance. A species-gap in proteome composition appeared at 0.7 Euclidean distance when using only specimens from the same sample. When other regions or seasons were included, intraspecific variability increased, resulting in overlaps of intra and inter-specific distance. Highest intraspecific distances (〉0.7) were observed between specimens from brackish and marine habitats (i.e., salinity probably affects proteomic patterns). When testing library sensitivity of the RF model to regionality, strong misidentification was only detected between two congener pairs. Still, the choice of reference library may have an impact on identification of closely related species and should be tested before routine application. We envisage high relevance of this time- and cost-efficient method for future zooplankton monitoring as it provides not only in-depth taxonomic resolution for counted specimens but also add-on information, such as on developmental stage or environmental conditions.
    Repository Name: EPIC Alfred Wegener Institut
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  • 62
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    Potential of MALDI‐TOF MS‐based proteomic fingerprinting for species identification of Cnidaria across classes, species, regions and developmental stages (2023)
    Wiley
    In:  EPIC3Molecular Ecology Resources, Wiley, 23(7), pp. 1620-1631, ISSN: 1755-098X
    Details
    Publication Date: 2023-10-23
    Description: Morphological identification of cnidarian species can be difficult throughout all life stages due to the lack of distinct morphological characters. Moreover, in some cnidarian taxa genetic markers are not fully informative, and in these cases combinations of different markers or additional morphological verifications may be required. Proteomic fingerprinting based on MALDI-TOF mass spectra was previously shown to provide reliable species identification in different metazoans including some cnidarian taxa. For the first time, we tested the method across four cnidarian classes (Staurozoa, Scyphozoa, Anthozoa, Hydrozoa) and included different scyphozoan life-history stages (polyp, ephyra, medusa) in our dataset. Our results revealed reliable species identification based on MALDI-TOF mass spectra across all taxa with species-specific clusters for all 23 analysed species. In addition, proteomic fingerprinting was successful for distinguishing developmental stages, still by retaining a species specific signal. Furthermore, we identified the impact of different salinities in different regions (North Sea and Baltic Sea) on proteomic fingerprints to be negligible. In conclusion, the effects of environmental factors and developmental stages on proteomic fingerprints seem to be low in cnidarians. This would allow using reference libraries built up entirely of adult or cultured cnidarian specimens for the identification of their juvenile stages or specimens from different geographic regions in future biodiversity assessment studies.
    Repository Name: EPIC Alfred Wegener Institut
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  • 63
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    Perspectives of species identification by MALDI‐TOF MS in monitoring—Stability of proteomic fingerprints in marine epipelagic copepods (2023)
    Wiley
    In:  EPIC3Molecular Ecology Resources, Wiley, 23(5), pp. 1077-1091, ISSN: 1755-098X
    Details
    Publication Date: 2023-10-23
    Description: We analysed the robustness of species identification based on proteomic composition to data processing and intraspecific variability, specificity and sensitivity of species-markers as well as discriminatory power of proteomic fingerprinting and its sensitivity to phylogenetic distance. Our analysis is based on MALDI-TOF MS (matrix-assisted laser desorption ionization time of flight mass spectrometry) data from 32 marine copepod species coming from 13 regions (North and Central Atlantic and adjacent seas). A random forest (RF) model correctly classified all specimens to the species level with only small sensitivity to data processing, demonstrating the strong robustness of the method. Compounds with high specificity showed low sensitivity, that is identification was based on complex pattern-differences rather than on presence of single markers. Proteomic distance was not consistently related to phylogenetic distance. A species-gap in proteome composition appeared at 0.7 Euclidean distance when using only specimens from the same sample. When other regions or seasons were included, intraspecific variability increased, resulting in overlaps of intra and inter-specific distance. Highest intraspecific distances (〉0.7) were observed between specimens from brackish and marine habitats (i.e., salinity probably affects proteomic patterns). When testing library sensitivity of the RF model to regionality, strong misidentification was only detected between two congener pairs. Still, the choice of reference library may have an impact on identification of closely related species and should be tested before routine application. We envisage high relevance of this time- and cost-efficient method for future zooplankton monitoring as it provides not only in-depth taxonomic resolution for counted specimens but also add-on information, such as on developmental stage or environmental conditions.
    Repository Name: EPIC Alfred Wegener Institut
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  • 64
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    Sea‐ice anomalies affect the acoustic presence of Antarctic pinnipeds in breeding areas (2023)
    Wiley
    In:  EPIC3Frontiers in Ecology and the Environment, Wiley, 21(5), pp. 227-233, ISSN: 1540-9295
    Details
    Publication Date: 2023-10-23
    Description: Sea ice is crucial for breeding in true Antarctic pinnipeds. Although critical to interpret and mitigate the effects of extreme climatic events on polar species, knowledge of the effects of strong sea-ice anomalies on the reproductive activity of true Antarctic pinnipeds is scarce. Underwater vocalizations in these species play a key role in reproduction and function as indicators for presence and breeding onset. Using 8 years of recordings, we quantified the effect of sea-ice concentration and drift on the acoustic presence probability of four pinniped species in their breeding areas. In all four species, acoustic activity timing was constant across years, but decreased when sea-ice cover conditions were 〈10%, suggesting that individuals may fail to anticipate rapid changes in sea-ice cover. In the species’ traditional breeding areas, extreme and regular negative anomalies in early austral-summer sea ice could affect long-term reproductive success. Our findings underscore the urgent need for a better understanding of climate-driven changes in high-fidelity breeding areas to mitigate current and future anthropogenic pressures, and to sustain the integrity and functionality of the Southern Ocean's ecosystems.
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  • 65
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    Sea‐ice anomalies affect the acoustic presence of Antarctic pinnipeds in breeding areas (2023)
    Wiley
    In:  EPIC3Frontiers in Ecology and the Environment, Wiley, 21(5), pp. 227-233, ISSN: 1540-9295
    Details
    Publication Date: 2023-10-23
    Description: Sea ice is crucial for breeding in true Antarctic pinnipeds. Although critical to interpret and mitigate the effects of extreme climatic events on polar species, knowledge of the effects of strong sea-ice anomalies on the reproductive activity of true Antarctic pinnipeds is scarce. Underwater vocalizations in these species play a key role in reproduction and function as indicators for presence and breeding onset. Using 8 years of recordings, we quantified the effect of sea-ice concentration and drift on the acoustic presence probability of four pinniped species in their breeding areas. In all four species, acoustic activity timing was constant across years, but decreased when sea-ice cover conditions were 〈10%, suggesting that individuals may fail to anticipate rapid changes in sea-ice cover. In the species’ traditional breeding areas, extreme and regular negative anomalies in early austral-summer sea ice could affect long-term reproductive success. Our findings underscore the urgent need for a better understanding of climate-driven changes in high-fidelity breeding areas to mitigate current and future anthropogenic pressures, and to sustain the integrity and functionality of the Southern Ocean's ecosystems.
    Repository Name: EPIC Alfred Wegener Institut
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  • 66
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    Sea‐ice anomalies affect the acoustic presence of Antarctic pinnipeds in breeding areas (2023)
    Wiley
    In:  EPIC3Frontiers in Ecology and the Environment, Wiley, 21(5), pp. 227-233, ISSN: 1540-9295
    Details
    Publication Date: 2023-10-23
    Description: Sea ice is crucial for breeding in true Antarctic pinnipeds. Although critical to interpret and mitigate the effects of extreme climatic events on polar species, knowledge of the effects of strong sea-ice anomalies on the reproductive activity of true Antarctic pinnipeds is scarce. Underwater vocalizations in these species play a key role in reproduction and function as indicators for presence and breeding onset. Using 8 years of recordings, we quantified the effect of sea-ice concentration and drift on the acoustic presence probability of four pinniped species in their breeding areas. In all four species, acoustic activity timing was constant across years, but decreased when sea-ice cover conditions were 〈10%, suggesting that individuals may fail to anticipate rapid changes in sea-ice cover. In the species’ traditional breeding areas, extreme and regular negative anomalies in early austral-summer sea ice could affect long-term reproductive success. Our findings underscore the urgent need for a better understanding of climate-driven changes in high-fidelity breeding areas to mitigate current and future anthropogenic pressures, and to sustain the integrity and functionality of the Southern Ocean's ecosystems.
    Repository Name: EPIC Alfred Wegener Institut
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  • 67
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    Sea‐ice anomalies affect the acoustic presence of Antarctic pinnipeds in breeding areas (2023)
    Wiley
    In:  EPIC3Frontiers in Ecology and the Environment, Wiley, 21(5), pp. 227-233, ISSN: 1540-9295
    Details
    Publication Date: 2023-10-23
    Description: Sea ice is crucial for breeding in true Antarctic pinnipeds. Although critical to interpret and mitigate the effects of extreme climatic events on polar species, knowledge of the effects of strong sea-ice anomalies on the reproductive activity of true Antarctic pinnipeds is scarce. Underwater vocalizations in these species play a key role in reproduction and function as indicators for presence and breeding onset. Using 8 years of recordings, we quantified the effect of sea-ice concentration and drift on the acoustic presence probability of four pinniped species in their breeding areas. In all four species, acoustic activity timing was constant across years, but decreased when sea-ice cover conditions were 〈10%, suggesting that individuals may fail to anticipate rapid changes in sea-ice cover. In the species’ traditional breeding areas, extreme and regular negative anomalies in early austral-summer sea ice could affect long-term reproductive success. Our findings underscore the urgent need for a better understanding of climate-driven changes in high-fidelity breeding areas to mitigate current and future anthropogenic pressures, and to sustain the integrity and functionality of the Southern Ocean's ecosystems.
    Repository Name: EPIC Alfred Wegener Institut
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  • 68
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    Proteomic fingerprinting enables quantitative biodiversity assessments of species and ontogenetic stages in Calanus congeners (Copepoda, Crustacea) from the Arctic Ocean (2023)
    Wiley
    In:  EPIC3Molecular Ecology Resources, Wiley, 23(2), pp. 382-395, ISSN: 1755-098X
    Details
    Publication Date: 2023-10-23
    Description: Species identification is pivotal in biodiversity assessments and proteomic fingerprinting by MALDI-TOF mass spectrometry has already been shown to reliably identify calanoid copepods to species level. However, MALDI-TOF data may contain more information beyond mere species identification. In this study, we investigated different ontogenetic stages (copepodids C1–C6 females) of three co-occurring Calanus species from the Arctic Fram Strait, which cannot be identified to species level based on morphological characters alone. Differentiation of the three species based on mass spectrometry data was without any error. In addition, a clear stage-specific signal was detected in all species, supported by clustering approaches as well as machine learning using Random Forest. More complex mass spectra in later ontogenetic stages as well as relative intensities of certain mass peaks were found as the main drivers of stage distinction in these species. Through a dilution series, we were able to show that this did not result from the higher amount of biomass that was used in tissue processing of the larger stages. Finally, the data were tested in a simulation for application in a real biodiversity assessment by using Random Forest for stage classification of specimens absent from the training data. This resulted in a successful stage-identification rate of almost 90%, making proteomic fingerprinting a promising tool to investigate polewards shifts of Atlantic Calanus species and, in general, to assess stage compositions in biodiversity assessments of Calanoida, which can be notoriously difficult using conventional identification methods.
    Repository Name: EPIC Alfred Wegener Institut
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  • 69
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    Wage bargaining and employment revisited: separability and efficiency in collective bargaining* (2023)
    Wiley
    In:  EPIC3Scandinavian Journal of Economics, Wiley, 125(2), pp. 403-440, ISSN: 0347-0520
    Details
    Publication Date: 2023-10-23
    Description: We analyse the two-dimensional Nash bargaining solution (NBS) by deploying the standard labour market negotiations model of McDonald and Solow. We show that the two-dimensional bargaining problem can be decomposed into two one-dimensional problems, such that the two solutions together replicate the solution of the two-dimensional problem if the NBS is applied. The axiom of “independence of irrelevant alternatives” is shown to be crucial for this type of decomposability. This result has significant implications for actual negotiations because it allows for the decomposition of a multi-dimensional bargaining problem into one-dimensional problems – and thus helps to facilitate real-world negotiations.
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    Cascading, interactive, and indirect effects of climate change on aquatic communities, habitats, and ecosystems (2023)
    Wiley
    In:  EPIC3Limnology and Oceanography, Wiley, 68(S1), pp. s1-s7, ISSN: 0024-3590
    Details
    Publication Date: 2023-08-09
    Repository Name: EPIC Alfred Wegener Institut
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    On their way to the north: larval performance of Hemigrapsus sanguineus invasive to the European coast—a comparison with the native European population of Carcinus maenas (2023)
    Springer Nature
    In:  EPIC3Biological Invasions, Springer Nature, pp. 1-18, ISSN: 1387-3547
    Details
    Publication Date: 2023-08-09
    Description: The Asian shore crab Hemigrapsus sanguineus has become invasive in North Europe and it co-occurs and competes with the native European shore crab Carcinus maenas. Both species develop through a feeding and dispersive larval phase characterised by several zoeal and a settling megalopa stage. Larvae of marine crabs are vulnerable to food limitation and warming has the potential to exacerbate the negative effects of food limitation on survival and growth. We quantified the combined effects of temperature and food limitation on larval performance (survival and growth) of H. sanguineus and we compared our results with those reported on performance of C. maenas larvae, under the same experimental design and methodology. Larvae from four females of H. sanguineus collected on Helgoland (North Sea) were experimentally reared from hatching to megalopa, at four temperatures (range 15–24 °C) and two food conditions (permanent vs. daily limited access to food). Larval survival of H. sanguineus was low at 15 °C and increased with temperature, in contrast to the high survival reported for C. maenas larvae in the range 15–24 °C. Food limitation reduced survival and body mass of H. sanguineus larvae at all temperatures, but without evidence of the exacerbating effect caused by high temperatures and reported for C. maenas. By contrast, high temperature (24 °C) mitigated the negative effect of food limitation on body mass on H. sanguineus larvae. Advantages of H. sanguineus over C. maenas appear especially under the increased temperatures expected from climate change.
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    Publisher Correction: Carbon dioxide sink in the Arctic Ocean from cross-shelf transport of dense Barents Sea water (2023)
    Springer Nature
    In:  EPIC3Nature Geoscience, Springer Nature, 16(2), pp. 189-189, ISSN: 1752-0894
    Details
    Publication Date: 2023-08-01
    Description: In the version of this article initially published, author Cora Hörstmann was wrongly listed with a second affiliation with the Department of Ecoscience–Applied Marine Ecology and Modelling, Aarhus University rather than the Mediterranean Institute of Oceanography (MIO), Marseille, France. Furthermore, references 83–97, now found in the Supplementary Tables caption, were wrongly cited in the Data Availability section. The errors have been corrected in the HTML and PDF versions of the article.
    Repository Name: EPIC Alfred Wegener Institut
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    Carbon dioxide sink in the Arctic Ocean from cross-shelf transport of dense Barents Sea water (2023)
    Springer Nature
    In:  EPIC3Nature Geoscience, Springer Nature, 16(1), pp. 82-88, ISSN: 1752-0894
    Details
    Publication Date: 2023-08-01
    Description: Large amounts of atmospheric carbon can be exported and retained in the deep sea on millennial time scales, buffering global warming. However, while the Barents Sea is one of the most biologically productive areas of the Arctic Ocean, carbon retention times were thought to be short. Here we present observations, complemented by numerical model simulations, that revealed a deep and widespread lateral injection of approximately 2.33 kt C d−1 from the Barents Sea shelf to some 1,200 m of the Nansen Basin, driven by Barents Sea Bottom Water transport. With increasing distance from the outflow region, the plume expanded and penetrated into even deeper waters and the sediment. The seasonally fluctuating but continuous injection increases the carbon sequestration of the Barents Sea by 1/3 and feeds the deep sea community of the Nansen Basin. Our findings combined with those from other outflow regions of carbon-rich polar dense waters highlight the importance of lateral injection as a global carbon sink. Resolving uncertainties around negative feedbacks of global warming due to sea ice decline will necessitate observation of changes in bottom water formation and biological productivity at a resolution high enough to quantify future deep carbon injection.
    Repository Name: EPIC Alfred Wegener Institut
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    Uniquely low stable iron isotopic signatures in deep marine sediments caused by Rayleigh distillation (2023)
    Springer Nature
    In:  EPIC3Scientific Reports, Springer Nature, 13(1), pp. 10281-, ISSN: 2045-2322
    Details
    Publication Date: 2023-08-03
    Description: Dissimilatory iron reduction (DIR) is suggested to be one of the earliest forms of microbial respiration. It plays an important role in the biogeochemical cycling of iron in modern and ancient sediments. Since microbial iron cycling is typically accompanied by iron isotope fractionation, stable iron isotopes are used as tracer for biological activity. Here we present iron isotope data for dissolved and sequentially extracted sedimentary iron pools from deep and hot subseafloor sediments retrieved in the Nankai Trough off Japan. Dissolved iron (Fe(II)aq) is isotopically light throughout the ferruginous sediment interval but some samples have exceptionally light isotope values. Such light values have never been reported in natural marine environments and cannot be solely attributed to DIR. We show that the light isotope values are best explained by a Rayleigh distillation model where Fe(II)aq is continuously removed from the pore water by adsorption onto iron (oxyhydr)oxide surfaces. While the microbially mediated Fe(II)aq release has ceased due to an increase in temperature beyond the threshold of mesophilic microorganisms, the abiotic adsorptive Fe(II)aq removal continued, leading to uniquely light isotope values. These findings have important implications for the interpretation of dissolved iron isotope data especially in deep subseafloor sediments.
    Repository Name: EPIC Alfred Wegener Institut
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    Three major mesoplanktonic communities resolved by in situ imaging in the upper 500 m of the global ocean (2023)
    Wiley
    In:  EPIC3Global Ecology and Biogeography, Wiley, ISSN: 1466-822X
    Details
    Publication Date: 2023-08-08
    Description: Aim: The distribution of mesoplankton communities has been poorly studied at global scale, especially from in situ instruments. This study aims to (1) describe the global distribution of mesoplankton communities in relation to their environment and (2) as-sess the ability of various environmental- based ocean regionalizations to explain the distribution of these communities. Location: Global ocean, 0–500 m depth. Time Period: 2008–2019. Major Taxa Studied: Twenty-eight groups of large mesoplanktonic and macroplank-tonic organisms, covering Metazoa, Rhizaria and Cyanobacteria. Methods: From a global data set of 2500 vertical profiles making use of the Underwater Vision Profiler 5 (UVP5), an in situ imaging instrument, we studied the global distribu-tion of large (〉600 μm) mesoplanktonic organisms. Among the 6.8 million imaged ob-jects, 330,000 were large zooplanktonic organisms and phytoplankton colonies, the rest consisting of marine snow particles. Multivariate ordination (PCA) and clustering were used to describe patterns in community composition, while comparison with existing regionalizations was performed with regression methods (RDA). Results: Within the observed size range, epipelagic plankton communities were Trichodesmium- enriched in the intertropical Atlantic, Copepoda- enriched at high latitudes and in upwelling areas, and Rhizaria-enriched in oligotrophic areas. In the mesopelagic layer, Copepoda-enriched communities were also found at high lati-tudes and in the Atlantic Ocean, while Rhizaria-enriched communities prevailed in the Peruvian upwelling system and a few mixed communities were found elsewhere. The comparison between the distribution of these communities and a set of existing regionalizations of the ocean suggested that the structure of plankton communities described above is mostly driven by basin- level environmental conditions. Main Conclusions: In both layers, three types of plankton communities emerged and seemed to be mostly driven by regional environmental conditions. This work sheds light on the role not only of metazoans, but also of unexpected large protists and cy-anobacteria in structuring large mesoplankton communities.
    Repository Name: EPIC Alfred Wegener Institut
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    Resilience of tropical invertebrate community assembly processes to a gradient of land use intensity (2023)
    Wiley
    In:  Oikos vol. 2023 no. e10328
    Details
    Publication Date: 2024-01-23
    Description: Understanding how community assembly processes drive biodiversity patterns is a \ncentral goal of community ecology. While it is generally accepted that ecological communities are assembled by both stochastic and deterministic processes, quantifying \ntheir relative importance remains challenging. Few studies have investigated how the \nrelative importance of stochastic and deterministic community assembly processes vary \namong taxa and along gradients of habitat degradation. Using data on 1645 arthropod species across seven taxonomic groups in Malaysian Borneo, we quantified the \nimportance of ecological stochasticity and of a suite of community assembly processes \nacross a gradient of logging intensity. The relationship between logging and community assembly varied depending on the specific combination of taxa and stochasticity \nmetric used, but, in general, the processes that govern invertebrate community assembly were remarkably robust to changes in land use intensity.
    Keywords: community assembly ; determinism ; habitat degradation ; logging ; stochasticity
    Repository Name: National Museum of Natural History, Netherlands
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    Metabarcoding read abundances of orchid mycorrhizal fungi are correlated to copy numbers estimated using ddPCR (2023)
    Wiley
    In:  New Phytologist vol. 2023
    Details
    Publication Date: 2024-01-22
    Description: Quantifying the abundances of fungi is key to understanding natural variation in mycorrhi-zal communities in relation to plant ecophysiology and environmental heterogeneity. High-throughput metabarcoding approaches have transformed our ability to characterize and com-pare complex mycorrhizal communities. However, it remains unclear how well metabarcodingread counts correlate with actual read abundances in the sample, potentially limiting their useas a proxy for species abundances. Here, we use droplet digital PCR (ddPCR) to evaluate the reliability of ITS2 metabarcodingdata for quantitative assessments of mycorrhizal communities in the orchid speciesNeottiaovatasampled at multiple sites. We performed specific ddPCR assays for eight families oforchid mycorrhizal fungi and compared the results with read counts obtained from metabar-coding. Our results demonstrate a significant correlation between DNA copy numbers measured byddPCR assays and metabarcoding read counts of major mycorrhizal partners ofN. ovata,highlighting the usefulness of metabarcoding for quantifying the abundance of orchid mycor-rhizal fungi. Yet, the levels of correlation between the two methods and the numbers of falsezero values varied across fungal families, which warrants cautious evaluation of the reliabilityof low-abundance families. This study underscores the potential of metabarcoding data for more quantitative analysesof mycorrhizal communities and presents practical workflows for metabarcoding and ddPCRto achieve a more comprehensive understanding of orchid mycorrhizal communities
    Keywords: droplet digital PCR ; fungalquantification ; metabarcoding ; mycorrhizalfungi ; orchid mycorrhiza
    Repository Name: National Museum of Natural History, Netherlands
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    East Asian summer precipitation in AWI‐CM3: Comparison with observations and CMIP6 models (2023)
    Wiley
    In:  EPIC3International Journal of Climatology, Wiley, pp. 1-16, ISSN: 0899-8418
    Details
    Publication Date: 2023-05-08
    Description: Owing to the complicated spatial–temporal characteristics of East Asian precipitation (EAP), climate models have limited skills in simulating the modern Asian climate. This consequently leads to large uncertainties in simulations of the past EAP variation and future projections. Here, we explore the performance of the newly developed Alfred Wegener Institute Climate Model,version 3 (AWI-CM3) in simulating the climatological summer EAP. To test whether the model's skill depends on its atmosphere resolution, we design two AWI-CM3 simulations with different horizontal resolutions. The result shows that both simulations have acceptable performance in simulating the summer mean EAP, generally better than the majority of individual models participating in the Coupled Model Intercomparison Project (CMIP6). However, for the monthly EAP from June to August, AWI-CM3 exhibits a decayed skill, which is due to the subseasonal movement of the western Pacific subtropical high bias. The higher-resolution AWI-CM3 simulation shows an overall improvement relative to the one performed at a relatively lower resolution in all aspects taken into account regarding the EAP. We conclude that AWI-CM3 is a suitable tool for exploring the EAP for the observational period. Having verified the model's skill for modern climate, we suggest employing the AWI-CM3, especially with high atmosphere resolution, both for applications in paleoclimate studies and future projections.
    Repository Name: EPIC Alfred Wegener Institut
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    Satellite-observed strong subtropical ocean warming as an early signature of global warming (2023)
    Springer Nature
    In:  EPIC3Communications Earth & Environment, Springer Nature, 4(1), 10 p., pp. 1-10, ISSN: 2662-4435
    Details
    Publication Date: 2023-06-02
    Description: Satellite observations covering the last four decades reveal an ocean warming pattern resembling the negative phase of the Pacific Decadal Oscillation. This pattern has therefore been widely interpreted as a manifestation of natural climate variability. Here, we re-examine the observed warming pattern and find that the predominant warming over the subtropical oceans, while mild warming or even cooling over the subpolar ocean, is dynamically consistent with the convergence and divergence of surface water. By comparison of observations, paleo-reconstructions, and model simulations, we propose that the observed warming pattern is likely a short-term transient response to the increased CO2 forcing, which only emerges during the early stage of anthropogenic warming. On centennial to millennial timescales, the subpolar ocean warming is expected to exceed the temporally dominant warming of the subtropical ocean. This delayed but amplified subpolar ocean warming has the potential to reshape the ocean-atmosphere circulation and threaten the stability of marine-terminating ice sheets.
    Repository Name: EPIC Alfred Wegener Institut
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    Reply to: No evidence of worsening Arctic springtime ozone losses over the 21st century (2023)
    Springer Nature
    In:  EPIC3Nature Communications, Springer Nature, 14(1), 4 p., pp. 1-4, ISSN: 2041-1723
    Details
    Publication Date: 2023-04-12
    Repository Name: EPIC Alfred Wegener Institut
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    TRACE ELEMENTS IN HIGH INCIDENCE AREAS OF MULTIPLE SCLEROSIS: A ROLE OF VOLCANOGENIC ASHES? (2023)
    Springer Nature
    Details
    Publication Date: 2023-02-07
    Description: Objective: To study the blood levels of selected trace elements (TE) in Multiple Sclerosis (MS) patients living in high-incidence cluster areas in the Etna volcano region. Methods: MS patients living in the province of Catania have been retrospectively enrolled among those followed by the Neurologic Clinic of the AOU Policlinico “G. Rodolico-San Marco” who had the disease onset between 2005 and 2020.Aserumsample was used for the determination of TE levels (As,Cd, Cr, Cu, Fe, Mg, Mn, Ni, Se, Zn). All the analyses have been conducted with an ICPMS with the standard addition technique, previous digestion of the samples with nitric acid. MS patients living the high incidence clusters were frequency matched with MS patients living outside the clusters. Comparisons of TE across the groups were conducted using the Mann-Whitney test. Results: A total of 86 (48 women; 55.8%) MS patients was recruited, with a mean age of 41.6±13.1 years, a mean disease duration of 2.0±2.6 years and a mean Expanded Disability Status Scale of 2.3±1.7. Of these patients, 40 belonged to high incidence clusters and 46 were outside the clusters. No differences were found in demographic characteristics between the groups. Concerning TE, we found a significant higher concentration of Mn in incluster patients (6.7±16.6 μg/L vs 2.5±5.9 μg/L). Discussion: Several environmental factors may modulate the pathogenesis of the disease, and among them TE play an important role. Our findings suggest that Manganese, which has several toxic effects, might contribute to the higher incidence of MS previously observed in a cluster of communalities in the south-eastern flank of the Etna volcano, where volcanic ashes rich in TE usually fall due to the prevailing winds. Conclusions: Exposition to high levels of Mn could be a cofactor in the pathogenesis of MS.
    Description: Published
    Description: Milano
    Description: 6A. Geochimica per l'ambiente e geologia medica
    Keywords: Multiple Sclerosis ; Mt. Etna ; 05. General
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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    Environmental DNA (eDNA) reveals potential for interoceanic fish invasions across the Panama Canal (2023)
    Wiley
    In:  EPIC3Ecology and Evolution, Wiley, 13(1), pp. e9675-e9675, ISSN: 2045-7758
    Details
    Publication Date: 2023-06-21
    Description: Interoceanic canals can facilitate biological invasions as they connect the world's oceans and remove dispersal barriers between bioregions. As a consequence, multiple opportunities for biotic exchange arise and the resulting establishment of migrant species often causes adverse ecological and economic impacts. The Panama Canal is a key region for biotic exchange as it connects the Pacific and Atlantic Oceans in Central America. In this study, we used two complementary methods (environmental DNA (eDNA) metabarcoding and gillnetting) to survey fish communities in this unique waterway. Using COI (cytochrome oxidase subunit I) metabarcoding, we detected a total of 142 fish species, including evidence for the presence of sixteen Atlantic and eight Pacific marine fish in different freshwater sections of the Canal. Of these, nine are potentially new records. Molecular data did not capture all species caught with gillnets, but generally provided a more complete image of the known fish fauna as more small-bodied fish species were detected. Diversity indices based on eDNA surveys revealed significant differences across different sections of the Canal reflecting in part the prevailing environmental conditions. The observed increase in the presence of marine fish species in the Canal indicates a growing potential for interoceanic fish invasions. The potential ecological and evolutionary consequences of this increase in marine fishes are not only restricted to the fish fauna in the Canal as they could also impact adjacent ecosystems in the Pacific and Atlantic Oceans.
    Repository Name: EPIC Alfred Wegener Institut
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    Multi‐temporal InSAR analysis to monitor landslides using the small baseline subset (SBAS) approach in the Mila Basin, Algeria (2023)
    Wiley
    Details
    Publication Date: 2023-02-28
    Description: Hazardous ground deformation and landslides occur frequently in the Mila Basin, Algeria and this problem remains unsolved. However, the historical seismicity in the area indicates no severe damage from past earthquakes. For this reason, studies are needed to monitor the slow ground movements and their triggering factors. Since about two decades ago, satellite observations by interferometric synthetic aperture radar (InSAR) technique and the multi-temporal (MT-InSAR) technique have provided a tool for monitoring slow and extremely slow ground displacements. In this study, 2D decomposition of InSAR outputs revealed a sliding surface at two regions located 12 km apart, indicating slow motion rather than fast movement along the damaged area. We concluded that the factors leading to surface displacement in the investigated area include the triggering earthquakes, precipitation, terrain topography and soil moisture. This study contributes to landslide hazard identification and risk assessment in the Mila Basin.
    Description: Published
    Description: 407–423
    Description: 2T. Deformazione crostale attiva
    Description: JCR Journal
    Keywords: Landslides ; InSAR ; Algeria ; Hazard ; Landslide monitoring using MT-InSAR technique in Algeria
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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    Insight into summer drought in southern Italy: palaeohydrological evolution of Lake Pergusa (Sicily) in the last 6700 years (2023)
    Wiley
    Details
    Publication Date: 2023-02-28
    Description: The Sicily region (central Mediterranean) is at high risk of drying and desertification caused by current warming and land management. The aim of this study is to place current climatic changes within the past trajectories and natural climatic variability of the Holocene. For this we re‐examine a sediment core retrieved at Lake Pergusa covering the last ca. 6700 years. A multiproxy investigation, and in particular the oxygen isotope composition of lacustrine carbonate (δ18Oc), allowed us to reconstruct decadal‐ to centennial‐scale hydrological changes. The wettest period occurred between ca. 6700 and 6000 cal a BP. The δ18Oc record indicates a new period of wetter conditions between ca. 3700 and 2400 cal a BP. In particular, a δ18Oc minimum between 2850 and 2450 cal a BP overlaps with the period of the ‘Great Solar Minimum’ and corresponds to a dramatic reduction of arboreal pollen (AP%) and to an increase in synanthropic pollen, marking the onset of Greek colonization in the region. The longest driest interval corresponds to the Medieval Climate Anomaly, whereas the highest δ18Oc values are recorded in the last 150 years. The trend of the last 3000 years suggests that, considering future climate projections, the area will experience unprecedented drying exacerbated by human impact.
    Description: Published
    Description: 1280-1293
    Description: 5A. Ricerche polari e paleoclima
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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    Cascading effects of prey identity on gene expression in a kleptoplastidic ciliate (2023)
    Wiley
    Details
    Publication Date: 2023-02-28
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Paight, C., Johnson, M., Lasek‐Nesselquist, E., & Moeller, H. Cascading effects of prey identity on gene expression in a kleptoplastidic ciliate. Journal of Eukaryotic Microbiology, 70(1), (2022): e12940, https://doi.org/10.1111/jeu.12940.
    Description: Kleptoplastidic, or chloroplast stealing, lineages transiently retain functional photosynthetic machinery from algal prey. This machinery, and its photosynthetic outputs, must be integrated into the host's metabolism, but the details of this integration are poorly understood. Here, we study this metabolic integration in the ciliate Mesodinium chamaeleon, a coastal marine species capable of retaining chloroplasts from at least six distinct genera of cryptophyte algae. To assess the effects of feeding history on ciliate physiology and gene expression, we acclimated M. chamaeleon to four different types of prey and contrasted well-fed and starved treatments. Consistent with previous physiological work on the ciliate, we found that starved ciliates had lower chlorophyll content, photosynthetic rates, and growth rates than their well-fed counterparts. However, ciliate gene expression mirrored prey phylogenetic relationships rather than physiological status, suggesting that, even as M. chamaeleon cells were starved of prey, their overarching regulatory systems remained tuned to the prey type to which they had been acclimated. Collectively, our results indicate a surprising degree of prey-specific host transcriptional adjustments, implying varied integration of prey metabolic potential into many aspects of ciliate physiology.
    Description: This work was supported by a grant from the Simons Foundation (Award # 689265 to HVM). Research was sponsored by the U.S. Army Research Office and accomplished under contract W911NF-19-D-0001 for the Institute for Collaborative Biotechnologies.
    Keywords: Acquired metabolism ; Cryptophyte ; Mesodinium chamaeleon ; Photophysiology ; Transcriptomics
    Repository Name: Woods Hole Open Access Server
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    European tree-ring isotopes indicate unusual recent hydroclimate (2023)
    Springer Nature
    In:  EPIC3Communications Earth & Environment, Springer Nature, 4(1), pp. 26-26, ISSN: 2662-4435
    Details
    Publication Date: 2023-02-20
    Description: In recent decades, Europe has experienced more frequent flood and drought events. However, little is known about the long-term, spatiotemporal hydroclimatic changes across Europe. Here we present a climate field reconstruction spanning the entire European continent based on tree-ring stable isotopes. A pronounced seasonal consistency in climate response across Europe leads to a unique, well-verified spatial field reconstruction of European summer hydroclimate back to AD 1600. We find three distinct phases of European hydroclimate variability as possible fingerprints of solar activity (coinciding with the Maunder Minimum and the end of the Little Ice Age) and pronounced decadal variability superimposed by a long-term drying trend from the mid-20th century. We show that the recent European summer drought (2015–2018) is highly unusual in a multi-century context and unprecedented for large parts of central and western Europe. The reconstruction provides further evidence of European summer droughts potentially being influenced by anthropogenic warming and draws attention to regional differences.
    Repository Name: EPIC Alfred Wegener Institut
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    Life cycle of the cold-water coral Caryophyllia huinayensis (2023)
    Springer Nature
    In:  EPIC3Scientific Reports, Springer Nature, 13(1), pp. 2593-2593, ISSN: 2045-2322
    Details
    Publication Date: 2023-03-07
    Description: Little is known about the biology of cold‑water corals (CWCs), let alone the reproduction and early life stages of these important deep‑sea foundation species. Through a three‑year aquarium experiment, we described the reproductive mode, larval release periodicity, planktonic stage, larval histology, metamorphosis and post‑larval development of the solitary scleractinian CWC Caryophyllia (Caryophyllia) huinayensis collected in Comau Fjord, Chilean Patagonia. We found that C. huinayensis is a brooder releasing 78.4 ± 65.9 (mean ± standard deviation [SD]) planula larvae throughout the year, a possible adaptation to low seasonality. Planulae had a length of 905 ± 114 μm and showed a well‑ developed gastrovascular system. After 8 ± 9.3 days (d), the larvae settled, underwent metamorphosis and developed the first set of tentacles after 2 ± 1.5 d. Skeletogenesis, zooplankton feeding and initiation of the fourth set of tentacles started 5 ± 2.1 d later, 21 ± 12.9 d, and 895 ± 45.9 d after settlement, respectively. Our study shows that the ontogenetic timing of C. huinayensis is comparable to that of some tropical corals, despite lacking zooxanthellae.
    Repository Name: EPIC Alfred Wegener Institut
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  • 88
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    Probable signature whistle production in Atlantic white-sided (Lagenorhynchus acutus) and short-beaked common (Delphinus delphis) dolphins near Cape Cod, Massachusetts (2023)
    Wiley
    Details
    Publication Date: 2023-03-11
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Cones, S., Dent, M., Walkes, S., Bocconcelli, A., DeWind, C., Arjasbi, K., Rose, K., Silva, T., & Sayigh, L. Probable signature whistle production in Atlantic white-sided (Lagenorhynchus acutus) and short-beaked common (Delphinus delphis) dolphins near Cape Cod, Massachusetts. Marine Mammal Science, 39(1), (2022): 338-344, https://doi.org/10.1111/mms.12976.
    Description: Some delphinids produce a learned, individually specific tonal whistle that conveys identity information to conspecifics (Janik & Sayigh, 2013). These whistles, termed signature whistles, were first described by Caldwell and Caldwell (1965) and have been studied intensively over the past several decades (Janik & Sayigh, 2013). In common bottlenose dolphins (Tursiops truncatus) and potentially other species, signature whistles facilitate many ecologically-important behaviors, including individual recognition and maintenance of group cohesion (Janik & Slater, 1998). Additionally, signature whistle contours, or patterns of frequency change over time, can remain stable for several decades, aiding in long-term social bonds (Sayigh et al., 1990). Signature whistles account for approximately 38%–70% of all whistle production in free-swimming animals (Buckstaff, 2004; Cook et al., 2004; Watwood et al., 2005); this percentage can be up to 100% for isolated individuals in captivity (Caldwell et al., 1990). Most of our knowledge on the function and use of signature whistles stems from Tursiops spp., and their use and presence in other delphinid taxa is less understood. Nonetheless, seven additional delphinid species have been reported to produce signature whistles: Indo-Pacific bottlenose dolphins (Tursiops aduncus; Gridley et al., 2014), common dolphins (D. delphis; Caldwell & Caldwell 1968; Fearey et al., 2019), Atlantic spotted dolphins (Stenella plagiodon; Caldwell et al., 1970), Pacific white-sided dolphins (Lagenorhynchus obliquidens; Caldwell & Caldwell, 1973), Pacific humpback dolphins (Sousa chinensis; Van Parijs & Corkeron, 2001), and Guiana dolphins (Sotalia guianensis; Duarte de Figueiredo & Simão, 2009).
    Description: Woods Hole Sea Grant, Woods Hole Oceanographic Institution, Grant/Award Number: NA14OAR4170074
    Repository Name: Woods Hole Open Access Server
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  • 89
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    Interplay between abiotic and microbial biofilm-mediated processes for travertine formation: Insights from a thermal spring (Piscine Carletti, Viterbo, Italy) (2023)
    Wiley
    Details
    Publication Date: 2023-03-16
    Description: Active hydrothermal travertine systems are ideal environments to investigate how abiotic and biotic processes affect mineralization mechanisms and mineral fabric formation. In this study, a biogeochemical characterization of waters, dissolved gases, and microbial mats was performed together with a mineralogical investigation on travertine encrustations occurring at the outflow channel of a thermal spring. The comprehensive model, compiled by means of TOUGHREACT computational tool from measured parameters, revealed that mineral phases were differently influenced by either abiotic conditions or microbially driven processes. Microbial mats are shaped by light availability and temperature gradient of waters flowing along the channel. Mineralogical features were homogeneous throughout the system, with euhedral calcite crystals, related to inorganic precipitation induced by CO2 degassing, and calcite shrubs associated with organomineralization processes, thus indicating an indirect microbial participation to the mineral deposition (microbially influenced calcite). The microbial activity played a role in driving calcite redissolution processes, resulting in circular pits on calcite crystal surfaces possibly related to the metabolic activity of sulfur-oxidizing bacteria found at a high relative abundance within the biofilm community. Sulfur oxidation might also explain the occurrence of gypsum crystals embedded in microbial mats, since gypsum precipitation could be induced by a local increase in sulfate concentration mediated by S-oxidizing bacteria, regardless of the overall undersaturated environmental conditions. Moreover, the absence of gypsum dissolution suggested the capability of microbial biofilm in modulating the mobility of chemical species by providing a protective envelope on gypsum crystals.
    Description: Published
    Description: 837-856
    Description: 6A. Geochimica per l'ambiente e geologia medica
    Description: JCR Journal
    Keywords: biofilms; gypsum; hot spring; microbial mat; travertine
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: article
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    A novel target\xe2\x80\x90enriched multilocus assay for sponges (Porifera): Red Sea Haplosclerida (Demospongiae) as a test case (2023)
    Wiley
    In:  Molecular Ecology Resources vol. 24 no. 2, pp. e1389-e1389
    Details
    Publication Date: 2024-02-15
    Description: With declining biodiversity worldwide, a better understanding of species diversity and their relationships is imperative for conservation and management efforts. Marine sponges are species-rich ecological key players on coral reefs, but their species diversity is still poorly understood. This is particularly true for the demosponge order Haplosclerida, whose systematic relationships are contentious due to the incongruencies between morphological and molecular phylogenetic hypotheses. The single gene markers applied in previous studies did not resolve these discrepancies. Hence, there is a high need for a genome-wide approach to derive a phylogenetically robust classification and understand this group\'s evolutionary relationships. To this end, we developed a target enrichment-based multilocus probe assay for the order Haplosclerida using transcriptomic data. This probe assay consists of 20,000 enrichment probes targeting 2956 ultraconserved elements in coding (i.e. exon) regions across the genome and was tested on 26 haplosclerid specimens from the Red Sea. Our target-enrichment approach correctly placed our samples in a well-supported phylogeny, in agreement with previous haplosclerid molecular phylogenies. Our results demonstrate the applicability of high-resolution genomic methods in a systematically complex marine invertebrate group and provide a promising approach for robust phylogenies of Haplosclerida. Subsequently, this will lead to biologically unambiguous taxonomic revisions, better interpretations of biological and ecological observations and new avenues for applied research, conservation and managing declining marine diversity.
    Keywords: bait design ; exon ; phylogenetic markers ; target capture ; ultraconserved element
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 91
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    Atmospheric concentrations of black carbon are substantially higher in spring than summer in the Arctic (2023)
    Springer Nature
    In:  EPIC3Communications Earth & Environment, Springer Nature, 4(1), pp. 91-91, ISSN: 2662-4435
    Details
    Publication Date: 2024-02-07
    Description: A key driving factor behind rapid Arctic climate change is black carbon, the atmospheric aerosol that most efficiently absorbs sunlight. Our knowledge about black carbon in the Arctic is scarce, mainly limited to long-term measurements of a few ground stations and snap-shots by aircraft observations. Here, we combine observations from aircraft campaigns performed over nine years, and present vertically resolved average black carbon properties. A factor of four higher black carbon mass concentration (21.6 ng m−3 average, 14.3 ng m−3 median) was found in spring, compared to summer (4.7 ng m−3 average, 3.9 ng m−3 median). In spring, much higher inter-annual and geographic variability prevailed compared to the stable situation in summer. The shape of the black carbon size distributions remained constant between seasons with an average mass mean diameter of 202 nm in spring and 210 nm in summer. Comparison between observations and concentrations simulated by a global model shows notable discrepancies, highlighting the need for further model developments and intensified measurements.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 92
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    Physiological response of an Antarctic cryptophyte to increasing temperature, CO2, and irradiance (2023)
    Wiley
    In:  EPIC3Limnology and Oceanography, Wiley, 68(8), pp. 1880-1894, ISSN: 0024-3590
    Details
    Publication Date: 2024-03-01
    Description: The Southern Ocean, a globally important CO2 sink, is one of the most susceptible regions in the world to climate change. Phytoplankton of the coastal shelf waters around the Western Antarctic Peninsula have been experiencing rapid warming over the past decades and current ongoing climatic changes will expose them to ocean acidification and high light intensities due to increasing stratification. We conducted a multiple-stressor experiment to evaluate the response of the still poorly studied key Antarctic cryptophyte species Geminigera cryophila to warming in combination with ocean acidification and high irradiance. Based on the thermal growth response of G. cryophila, we grew the cryptophyte at suboptimal (2°C) and optimal (4°C) temperatures in combination with two light intensities (medium light: 100 μmol photons m−2 s−1 and high light [HL]: 500 μmol photons m−2 s−1) under ambient (400 μatm pCO2) and high pCO2 (1000 μatm pCO2) conditions. Our results reveal that G. cryophila was not susceptible to high pCO2, but was strongly affected by HL at 2°C, as both growth and carbon fixation were significantly reduced. In comparison, warming up to 4°C stimulated the growth of the cryptophyte and even alleviated the previously observed negative effects of HL at 2°C. When grown, however, at temperatures above 4°C, the cryptophyte already reached its maximal thermal limit at 8°C, pointing out its vulnerability toward even higher temperatures. Hence, our results clearly indicate that warming and high light and not pCO2 control the growth of G. cryophila.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , peerRev
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  • 93
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    The physiological response of an Antarctic key phytoplankton species to low iron and manganese concentrations (2023)
    Wiley
    In:  EPIC3Limnology and Oceanography, Wiley, 68(9), pp. 2153-2166, ISSN: 0024-3590
    Details
    Publication Date: 2024-03-01
    Description: Iron (Fe) and manganese (Mn) availability and the divergent requirements of phytoplankton species were recently shown to be potential important drivers of Southern Ocean community composition. Knowledge about Antarctic phytoplankton species requirements for Fe and Mn remains, however, scarce. By performing laboratory experiments and additional calculations of the photosynthetic electron transport, we investigated the response of the ecologically important species Phaeocystis antarctica under a combination of different Fe and Mn concentrations. Fe deprivation alone provoked typical physiological characteristics of Fe limitation in P. antarctica (e.g., lowered growth and photosynthetic efficiency). In comparison, under Mn deprivation alone, the growth and carbon production of P. antarctica were not impacted. Its tolerance to cope with low Mn concentrations resulted from an efficient photoacclimation strategy, including a higher number of active photosystems II through which fewer electrons were transported. This strategy allowed us to maintain similar high growth and carbon production rates as FeMn-enriched cells. Due to its low Mn requirement, P. antarctica performed physiologically as Fe-deprived cells under the combined depletion of Fe and Mn. Hence, our study reveals that different from other Southern Ocean phytoplankton species, P. antarctica possesses a high capacity to cope with natural low Mn concentrations, which can facilitate its dominance over others, potentially explaining its ecological success across the Southern Ocean.
    Repository Name: EPIC Alfred Wegener Institut
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  • 94
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    Revised historical Northern Hemisphere black carbon emissions based on inverse modeling of ice core records (2023)
    Springer Nature
    In:  EPIC3Nature Communications, Springer Nature, 14(1), pp. 271-271, ISSN: 2041-1723
    Details
    Publication Date: 2024-03-01
    Description: Black carbon emitted by incomplete combustion of fossil fuels and biomass has a net warming effect in the atmosphere and reduces the albedo when deposited on ice and snow; accurate knowledge of past emissions is essential to quantify and model associated global climate forcing. Although bottom-up inventories provide historical Black Carbon emission estimates that are widely used in Earth System Models, they are poorly constrained by observations prior to the late 20th century. Here we use an objective inversion technique based on detailed atmospheric transport and deposition modeling to reconstruct 1850 to 2000 emissions from thirteen Northern Hemisphere ice-core records. We find substantial discrepancies between reconstructed Black Carbon emissions and existing bottom-up inventories which do not fully capture the complex spatial-temporal emission patterns. Our findings imply changes to existing historical Black Carbon radiative forcing estimates are necessary, with potential implications for observation-constrained climate sensitivity.
    Repository Name: EPIC Alfred Wegener Institut
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  • 95
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    Phylogenomic species delimitation of the twisted\xe2\x80\x90winged parasite genus Stylops (Strepsiptera) (2023)
    Wiley
    In:  Systematic Entomology
    Details
    Publication Date: 2024-02-22
    Description: The twisted-winged parasite genus Stylops has a history of different species concepts with varying host specificity resulting in diverse species diversity estimates in different regions of the Holarctic. The adoption of a supergeneralist species concept in Europe, proposing synonymization of all Western Palaearctic Stylops species, did not facilitate taxonomic clarity and obscured the available life-history data in the region for decades. Lack of molecular data has allowed divergent opinions on species hypotheses and little opportunity for evaluating them in this morphologically challenging genus. To solve these discrepancies and gain novel information about host associations, we applied whole-genome sequencing to 163 specimens, representing a significant portion of putative European species. We evaluate the existing and conflicting species hypotheses with molecular species delimitation using Species bOundry Delimitation using Astral (SODA)and use a maximum likelihood phylogeny to investigate host associations of the species. Furthermore, we evaluate the effect of a number of loci used in SODA for the number of inferred species. We find justification for synonymization of multiple species and indications of undescribed species, as well as new host\xe2\x80\x93parasite relationships. We show that the number of inferred species in SODA is exceedingly and positively correlated with the number of loci used, urging for cautious application. The results of our study bring clarity to the Western Palaearctic species diversity of Stylops. Furthermore, the comprehensive molecular dataset generated in this study will be a valuable resource for future studies on Stylops and the evolution of parasites in general.
    Keywords: [Released under the CC-BY NC 4.0 (\xe2\x80\x9cAttribution-NonCommercial 4.0 International\xe2\x80\x9d) ; License](https://creativecommons.org/licenses/by-nc/4.0/)
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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    Environmental vibrio phage–bacteria interaction networks reflect the genetic structure of host populations (2023)
    Wiley
    In:  EPIC3Environmental Microbiology, Wiley, 25(8), pp. 1424-1438, ISSN: 1462-2912
    Details
    Publication Date: 2024-01-24
    Description: 〈jats:title〉Abstract〈/jats:title〉〈jats:p〉Phages depend on their bacterial hosts to replicate. The habitat, density and genetic diversity of host populations are therefore key factors in phage ecology, but our ability to explore their biology depends on the isolation of a diverse and representative collection of phages from different sources. Here, we compared two populations of marine bacterial hosts and their phages collected during a time series sampling program in an oyster farm. The population of 〈jats:italic〉Vibrio crassostreae〈/jats:italic〉, a species associated specifically to oysters, was genetically structured into clades of near clonal strains, leading to the isolation of closely related phages forming large modules in phage–bacterial infection networks. For 〈jats:italic〉Vibrio chagasii〈/jats:italic〉, which blooms in the water column, a lower number of closely related hosts and a higher diversity of isolated phages resulted in small modules in the phage–bacterial infection network. Over time, phage load was correlated with 〈jats:italic〉V. chagasii〈/jats:italic〉 abundance, indicating a role of host blooms in driving phage abundance. Genetic experiments further demonstrated that these phage blooms can generate epigenetic and genetic variability that can counteract host defence systems. These results highlight the importance of considering both the environmental dynamics and the genetic structure of the host when interpreting phage–bacteria networks.〈/jats:p〉
    Repository Name: EPIC Alfred Wegener Institut
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    Are all copepods the same? Variation in copepod stoichiometry with taxonomy, ontogeny, latitude, and habitat (2023)
    Wiley
    In:  EPIC3Ecosphere, Wiley, 14(12), ISSN: 2150-8925
    Details
    Publication Date: 2024-02-08
    Description: Copepods are the most abundant metazoans on Earth, driving cycles of key elements in aquatic systems, most prominently carbon (C), nitrogen (N), and phosphorus (P). One key factor determining nutrient cycling is copepod somatic stoichiometry, which can reflect ecological strategy. We conducted a systematic review that updates the seminal work of Båmstedt (1986) by summarizing the effects of latitude, habitat, life history stage, and taxonomy on C:N, C:P, and N:P ratios of field-collected copepods. We found that differences among copepod families accounted for the greatest variation, with the Rhincalanidae and Diaptomidae being particularly C-rich, while the Calanidae were more N- and P-rich. Copepod C:N was higher in inland waters compared with animals from marine environments in both copepodites and adult females, matching the higher C content of seston in many inland freshwaters. For both copepodites and adult females, mid-latitude animals had higher C:N and C:P than high-latitude animals, which matched predictions based on the availability of nutrients or adaptation to cold environments. More data must be gathered to fill gaps in our knowledge of copepod stoichiometry, focusing particularly on younger life stages, non-calanoids, low and high latitudes, the southern hemisphere, and estuarine and some inland water habitats, including large lakes. Such information will help better parameterize models of aquatic ecosystems and improve our understanding of how copepods influence consumer-driven nutrient cycling and food web dynamics.
    Repository Name: EPIC Alfred Wegener Institut
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  • 98
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    Microborings reveal alternating agitation, resting and sleeping stages of modern marine ooids (2023)
    Wiley
    In:  EPIC3Sedimentology, Wiley, ISSN: 0037-0746
    Details
    Publication Date: 2023-11-15
    Description: 〈jats:title〉ABSTRACT〈/jats:title〉〈jats:p〉Ooids are abundant carbonate grains throughout much of Earth's history, but their formation is not well understood. Here, an in‐depth study of microbial bioerosion features of Holocene ooids from the Schooner Cays ooid shoals (Great Bahama Bank, Eleuthera, Bahamas) and the Shalil al Ud ooid shoals in the Gulf (Abu Dhabi, United Arab Emirates) is presented. No obvious differences were found in ooid size distribution, cortex layer thickness, the composition of nuclei or euendolithic community when comparing ooids from both locations. Microendolithic borings are present in most studied ooid surfaces, but the intensity of (micro‐)bioerosion varies significantly. Applying an epoxy vacuum cast‐embedding technique allowed the identification of ichnotaxa and their inferred producers (various genera of diatoms, cyanobacteria, coccolithophores and unspecified bacteria). Euendolithic taxa have specific low‐light tolerances and light optima. This implies that information about the relative bathymetry (seafloor versus burial within an ooid shoal) and ecology for ooid cortex formation can be obtained via the presence or absence of their respective ichnotaxa. The history of a statistically significant number of ooid cortices can be translated into dune dynamics and the temporal variations thereof by allocating the inferred index producer to a defined burial or light penetration zone. In this context, ooid formation can be divided into four stages: (i) an agitation stage in the water column, characterized by the colonization of grains by photoautotrophs; (ii) a resting stage, characterized by temporary burial of the ooid, leading to immobilization and a shift towards heterotrophs; (iii) a sleeping stage, characterized by prolonged burial and colonialization by organotrophs; and (iv) a reactivation stage, characterized by a resurfacing of the ooid and a subsequent shift towards photoautotrophs. The sleeping stage is presumably a stage of ooid degradation where bioerosion, mainly by heterotrophic fungi and bacteria is particularly active.〈/jats:p〉
    Repository Name: EPIC Alfred Wegener Institut
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  • 99
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    Ecological mechanisms and current systems shape the modular structure of the global oceans’ prokaryotic seascape (2023)
    Springer Nature
    In:  EPIC3Nature Communications, Springer Nature, 14(1), 15 p., pp. 6141-6141, ISSN: 2041-1723
    Details
    Publication Date: 2023-11-08
    Description: Major biogeographic features of the microbial seascape in the oceans have been established and their underlying ecological mechanisms in the (sub)tropical oceans and the Pacific Ocean identified. However, we still lack a unifying understanding of how prokaryotic communities and biogeographic patterns are affected by large-scale current systems in distinct ocean basins and how they are globally shaped in line with ecological mechanisms. Here we show that prokaryotic communities in the epipelagic Pacific and Atlantic Ocean, in the southern Indian Ocean, and the Mediterranean Sea are composed of modules of co-occurring taxa with similar environmental preferences. The relative partitioning of these modules varies along latitudinal and longitudinal gradients and are related to different hydrographic and biotic conditions. Homogeneous selection and dispersal limitation were identified as the major ecological mechanisms shaping these communities and their free-living (FL) and particle-associated (PA) fractions. Large-scale current systems govern the dispersal of prokaryotic modules leading to the highest diversity near subtropical fronts.
    Repository Name: EPIC Alfred Wegener Institut
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  • 100
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    Vitamin B12 is not shared by all marine prototrophic bacteria with their environment (2023)
    Springer Nature
    In:  EPIC3The ISME Journal: Multidisciplinary Journal of Microbial Ecology, Springer Nature, 17(6), pp. 836-845, ISSN: 1751-7362
    Details
    Publication Date: 2023-11-14
    Description: Vitamin B12 (cobalamin, herein B12) is an essential cofactor involved in amino acid synthesis and carbon resupply to the TCA cycle for most prokaryotes, eukaryotic microorganisms, and animals. Despite being required by most, B12 is produced by only a minor fraction of prokaryotes and therefore leads to complex interaction between prototrophs and auxotrophs. However, it is unknown how B12 is provided by prototrophs to auxotrophs. In this study, 33 B12 prototrophic alphaproteobacterial strains were grown in co-culture with Thalassiosira pseudonana, a B12 auxotrophic diatom, to determine the bacterial ability to support the growth of the diatom by sharing B12. Among these strains, 18 were identified to share B12 with the diatom, while nine were identified to retain B12 and not support growth of the diatom. The other bacteria either shared B12 with the diatom only with the addition of substrate or inhibited the growth of the diatom. Extracellular B12 measurements of B12-provider and B12-retainer strains confirmed that the cofactor could only be detected in the environment of the tested B12-provider strains. Intracellular B12 was measured by LC-MS and showed that the concentrations of the different B12-provider as well as B12-retainer strains differed substantially. Although B12 is essential for the vast majority of microorganisms, mechanisms that export this essential cofactor are still unknown. Our results suggest that a large proportion of bacteria that can synthesise B12de novo cannot share the cofactor with their environment.
    Repository Name: EPIC Alfred Wegener Institut
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