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  • Frontiers Media S.A.  (41)
  • Nature Research  (29)
  • American Institute of Physics
  • American Meteorological Society (AMS)
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  • 2020-2023  (72)
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  • 1
    Publication Date: 2022-03-29
    Description: Earthquake Early Warning Systems (EEWSs) represent a technical-scientific challenge aimed at improving the chance of the population exposed to the earthquake shaking of surviving or being less affected. The ability of an EEWS to affect the risk and, in particular, vulnerability and exposure, may determine serious legal responsibilities for people involved in the system, as scientists and experts. The main question concerns, in fact, the relationship between EEWSs and the predictability and avoidability of earthquake effects-i.e., the ground shaking affecting citizens and infrastructures - and the possibility for people to adopt self-protective behavior and/or for industrial infrastructures to be secured. In Italy, natural disasters, such as the 2009 L’Aquila earthquake, teach us that the relationship between science and law is really difficult. So, before EEW’s become operational in Italy, it is necessary to: 1) examine the legislative and technical solutions adopted by some of the international legal systems in countries where this service is offered to citizens; 2) reconstruct the international and European regulatory framework that promotes the introduction of EW systems as life-saving tools for the protection of the right to life and understand whether and how these regulatory texts can impose an obligation on the Italian legal system to develop EEWS; 3) understand what responsibilities could be ascribed to the scientists and technicians responsible for managing EEWS in Italy, analyzing the different impact of vulnerability and exposure on the predictability and avoidability of the harmful event; 4) reflect on the lessons that our legal system will have to learn from other Countries when implementing EEW systems. In order to find appropriate solutions, it is essential to reflect on the opportunity to provide shared and well-structured protocols and creating detailed disclaimers clearly defining the limits of the service. A central role must be recognized to education, because people should not only expect to receive a correct alarm but must be able to understand the uncertainties involved in rapid estimates, be prepared to face the risk, and react in the right way.
    Description: This work has been carried out within the Project ART-IT (Allerta Rapida Terremoti in Italia), funded by the Italian Ministry of University and Research (Progetto Premiale 2015, DM. 850/2017).
    Description: Published
    Description: 685153
    Description: 1SR TERREMOTI - Sorveglianza Sismica e Allerta Tsunami
    Description: JCR Journal
    Keywords: earthquake, early warning, criminal liability, negligence, risk ; Early warning, criminal law, human rights
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 2
    Publication Date: 2022-03-07
    Description: Decades of geochemical monitoring at active crater lakes worldwide have confirmed that variations in major elements and physico-chemical parameters are useful to detect changes in volcanic activity. However, it is still arduous to identify precursors of single phreatic eruptions. During the unrest phase of 2009–2016, at least 679 phreatic eruptions occurred at the hyperacid and hypersaline crater lake Laguna Caliente of Poás volcano (Costa Rica). In this study, we investigate the temporal variations of Rare Earth Elements (REE) dissolved in Laguna Caliente in order to 1) scrutinize if they can be used as a new geochemical tool to monitor changes of phreatic activity at hyperacid crater lakes and 2) identify the geochemical processes responsible for the variations of REE concentrations in the lake. The total concentration of REE varies from 950 to 2,773 μg kg−1. (La/Pr)N-local rock ratios range from 0.93 to 1.35, and Light REE over Heavy REE (LREE/HREE)N-local rock ratios vary from 0.71 to 0.95. These same parameters vary in relation to significant changes in phreatic activity; in particular, the (La/Pr)N-local rock ratio increases as phreatic activity increases, while that of (LREE/HREE)N-local rock decreases when phreatic activity increases. REE concentrations and their ratios were compared with the variations of major elements and physico-chemical parameters of the lake. Calcium versus (La/Pr)N-local rock and versus (LREE/HREE)N-local rock ratios show different trends compared to the other major elements (Na, K, Mg, Al, Fe, SO4, and Cl). Moreover, a higher loss of Ca (up to 2,835 ppm) in lake water was found with respect to the loss of Al, K, and Na. This loss of Ca is argued to be due to gypsum precipitation, a process corroborated by the mass balance calculation simulating the precipitation of gypsum and the contemporaneous removal of REE from the lake water. The observed relations between REE, changes in phreatic activity, and the parameters commonly used for the monitoring of hyperacid volcanic lakes encourage investigating more on the temporal and cause-effect relationship between REE dynamics and changes in phreatic activity at crater lake-bearing volcanoes.
    Description: Published
    Description: 716970
    Description: 5V. Processi eruttivi e post-eruttivi
    Description: 6A. Geochimica per l'ambiente e geologia medica
    Description: 2IT. Laboratori analitici e sperimentali
    Description: JCR Journal
    Keywords: Rare Earth Elements ; Poas Volcano ; phreatic eruptions ; geochemical monitoring ; hyperacid volcanic lakes ; Geochemistry
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 3
    Publication Date: 2022-03-07
    Description: Coastal and ocean island volcanoes are renowned for having unstable flanks. This can lead to flank deformation on a variety of temporal and spatial scales ranging from slow creep to catastrophic sector collapse. A large section of these unstable flanks is often below sea level, where information on the volcano-tectonic structure and ground deformation is limited. Consequently, kinematic models that attempt to explain measured ground deformation onshore associated with flank instability are poorly constrained in the offshore area. Here, we attempt to determine the locations and the morpho-tectonic structures of the boundaries of the submerged unstable southeastern flank of Mount Etna (Italy). The integration of new marine data (bathymetry, microbathymetry, offshore seismicity, reflection seismic lines) and published marine data (bathymetry, seafloor geodesy, reflection seismic lines) allows identifying the lineament north of Catania Canyon as the southern lateral boundary with a high level of confidence. The northern and the distal (seaward) boundaries are less clear because no microbathymetric or seafloor geodetic data are available. Hypotheses for their locations are presented. Geophysical imaging suggests that the offshore Timpe Fault System is a shallow second-order structure that likely results from extensional deformation within the moving flank. Evidence for active uplift and compression upslope of the amphitheater-shaped depression from seismic data along with subsidence of the onshore Giarre Wedge block observed in ground deformation data leads us to propose that this block is a rotational slump, which moves on top of the large-scale instability. The new shoreline-crossing structural assessment may now inform and improve kinematic models.
    Description: Published
    Description: 810790
    Description: 2V. Struttura e sistema di alimentazione dei vulcani
    Description: JCR Journal
    Keywords: seafloor ; fault ; flank dynamics ; hydroacoustic ; geodesy ; seismic profiles ; 04.07. Tectonophysics ; 04.08. Volcanology ; 04.06. Seismology ; 04.02. Exploration geophysics ; 05.02. Data dissemination
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 4
    Publication Date: 2022-05-02
    Description: The entanglement between active tectonics and karst systems is well-known in the literature. Karst systems are sound recorders of continental deformation in terms of brittle structures and seismic features and have been successfully used as markers for reconstructing tectonic stresses and assessing preferential directions of increased permeability in oil and gas fields. Karst systems could also be exploited to evaluate the past activity of faults bounding karst hydrostructures, thus providing useful data for the assessment of the seismic hazard of a specific area. In this work, we look into the complex relationship among karst development, recent tectonics and groundwater flow, which appear to be strongly interconnected with each other, to assess the activity of faults bounding karst hydrostructures. We focused our attention on an active karst area located in the Mesozoic and Cenozoic carbonate reliefs of the Italian central Apennines. In this context, the morphological and morphometric features of the karst landforms (dolines, dry valleys, and cave entrances), identified with geomorphological surveys, and their mutual relationship with fractures and fault segments, identified employing geostructural analysis, document stasis and deepening events in karst evolution. Such events are related to changes in the groundwater table and the consequent variation of the paleokarst base level associated with the Quaternary fault activity. A comprehensive evaluation of the evolution of karst systems at local and regional scales, considering the hydrogeological influence on base levels, allows us to use karst landforms as a proxy to unravel fault activity and evolution in Italy and in other similar karst environments.
    Description: Published
    Description: 891319
    Description: 5T. Sismologia, geofisica e geologia per l'ingegneria sismica
    Description: 6T. Studi di pericolosità sismica e da maremoto
    Description: JCR Journal
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  • 5
    Publication Date: 2022-04-21
    Description: We use a novel technique named global-phase seismic interferometry (GloPSI) to image the lithospheric structure, and in particular the Moho, below two parallel north-south transects belonging to the GANSSER network (2013–2014). The profiles cross the Himalayan orogenic wedge in Bhutan, a tectonically important area within the largest continent-continent collision zone on Earth that is still undergoing crustal thickening and represents a challenging imaging target for the GloPSI approach. GloPSI makes use of direct waves from distant earthquakes and receiver-side reverberations with near vertical incidence. Reflections are isolated from earthquake recordings by solving a correlation integral and are turned into a reflectivity image of the lithosphere below the arrays. Our results compare favorably with first-order features observed from a previous receiver function (RF) study. We show that a combined interpretation of GloPSI and RF results allows for a more in-depth understanding of the lithospheric structure across the orogenic wedge in Bhutan.
    Description: Published
    Description: 658146
    Description: 1T. Struttura della Terra
    Description: JCR Journal
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  • 6
    Publication Date: 2022-04-28
    Description: Submarine hydrothermal systems along active volcanic ridges and arcs are highly dynamic, responding to both oceanographic (e.g., currents, tides) and deep-seated geological forcing (e.g., magma eruption, seismicity, hydrothermalism, and crustal deformation, etc.). In particular, volcanic and hydrothermal activity may also pose profoundly negative societal impacts (tsunamis, the release of climate-relevant gases and toxic metal(loid)s). These risks are particularly significant in shallow (〈1000m) coastal environments, as demonstrated by the January 2022 submarine paroxysmal eruption by the Hunga Tonga-Hunga Ha’apai Volcano that destroyed part of the island, and the October 2011 submarine eruption of El Hierro (Canary Islands) that caused vigorous upwelling, floating lava bombs, and natural seawater acidification. Volcanic hazards may be posed by the Kolumbo submarine volcano, which is part of the subduction-related Hellenic Volcanic Arc at the intersection between the Eurasian and African tectonic plates. There, the Kolumbo submarine volcano, 7 km NE of Santorini and part of Santorini’s volcanic complex, hosts an active hydrothermal vent field (HVF) on its crater floor (~500m b.s.l.), which degasses boiling CO2–dominated fluids at high temperatures (~265°C) with a clear mantle signature. Kolumbo’s HVF hosts actively forming seafloor massive sulfide deposits with high contents of potentially toxic, volatile metal(loid)s (As, Sb, Pb, Ag, Hg, and Tl). The proximity to highly populated/tourist areas at Santorini poses significant risks. However, we have limited knowledge of the potential impacts of this type of magmatic and hydrothermal activity, including those from magmatic gases and seismicity. To better evaluate such risks the activity of the submarine system must be continuously monitored with multidisciplinary and high resolution instrumentation as part of an in-situ observatory supported by discrete sampling and measurements. This paper is a design study that describes a new long-term seafloor observatory that will be installed within the Kolumbo volcano, including cutting-edge and innovative marine-technology that integrates hyperspectral imaging, temperature sensors, a radiation spectrometer, fluid/gas samplers, and pressure gauges. These instruments will be integrated into a hazard monitoring platform aimed at identifying the precursors of potentially disastrous explosive volcanic eruptions, earthquakes, landslides of the hydrothermally weakened volcanic edifice and the release of potentially toxic elements into the water column.
    Description: Published
    Description: 796376
    Description: 1V. Storia eruttiva
    Description: 2V. Struttura e sistema di alimentazione dei vulcani
    Description: 3A. Geofisica marina e osservazioni multiparametriche a fondo mare
    Description: 4A. Oceanografia e clima
    Description: 6A. Geochimica per l'ambiente e geologia medica
    Description: JCR Journal
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  • 7
    Publication Date: 2022-03-21
    Description: During the lithospheric buildup to an earthquake, complex physical changes occur within the earthquake hypocenter. Data pertaining to the changes in the ionosphere may be obtained by satellites, and the analysis of data anomalies can help identify earthquake precursors. In this paper, we present a deep-learning model, SeqNetQuake, that uses data from the first China Seismo-Electromagnetic Satellite (CSES) to identify ionospheric perturbations prior to earthquakes. SeqNetQuake achieves the best performance [F-measure (F1) = 0.6792 and Matthews correlation coefficient (MCC) = 0.427] when directly trained on the CSES dataset with a spatial window centered on the earthquake epicenter with the Dobrovolsky radius and an input sequence length of 20 consecutive observations during night time. We further explore a transferring learning approach, which initially trains the model with the larger Electro-Magnetic Emissions Transmitted from the Earthquake Regions (DEMETER) dataset, and then tunes the model with the CSES dataset. The transfer-learning performance is substantially higher than that of direct learning, yielding a 12% improvement in the F1 score and a 29% improvement in the MCC value. Moreover, we compare the proposed model SeqNetQuake with other five benchmarking classifiers on an independent test set, which shows that SeqNetQuake demonstrates a 64.2% improvement in MCC and approximately a 24.5% improvement in the F1 score over the second-best convolutional neural network model. SeqNetSquake achieves significant improvement in identifying pre-earthquake ionospheric perturbation and improves the performance of earthquake prediction using the CSES data.
    Description: Published
    Description: 779255
    Description: 7T. Variazioni delle caratteristiche crostali e "precursori"
    Description: JCR Journal
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  • 8
    Publication Date: 2022-03-21
    Description: The oceans are a fundamental source for climate balance, sustainability of resources and life on Earth, therefore society has a strong and pressing interest in maintaining and, where possible, restoring the health of the marine ecosystems. Effective, integrated ocean observation is key to suggesting actions to reduce anthropogenic impact from coastal to deep-sea environments and address the main challenges of the 21st century, which are summarized in the UN Sustainable Development Goals and Blue Growth strategies. The European Multidisciplinary Seafloor and water column Observatory (EMSO), is a European Research Infrastructure Consortium (ERIC), with the aim of providing long-term observations via fixed-point ocean observatories in key environmental locations across European seas from the Arctic to the Black Sea. These may be supported by ship-based observations and autonomous systems such as gliders. In this paper, we present the EMSO Generic Instrument Module (EGIM), a deployment ready multi-sensor instrumentation module, designed to measure physical, biogeochemical, biological and ecosystem variables consistently, in a range of marine environments, over long periods of time. Here, we describe the system, features, configuration, operation and data management. We demonstrate, through a series of coastal and oceanic pilot experiments that the EGIM is a valuable standard ocean observation module, which can significantly improve the capacity of existing ocean observatories and provides the basis for new observatories. The diverse examples of use included the monitoring of fish activity response upon oceanographic variability, hydrothermal vent fluids and particle dispersion, passive acoustic monitoring of marine mammals and time series of environmental variation in the water column. With the EGIM available to all the EMSO Regional Facilities, EMSO will be reaching a milestone in standardization and interoperability, marking a key capability advancement in addressing issues of sustainability in resource and habitat management of the oceans.
    Description: project EMSODEV (Grant agreement No 676555)
    Description: Published
    Description: 801033
    Description: 3A. Geofisica marina e osservazioni multiparametriche a fondo mare
    Description: JCR Journal
    Keywords: fixed-point observatories, multi-parametric monitoring, seafloor, water column, EMSO, EGIM, EOV ; seafloor observatories
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 9
    Publication Date: 2022-03-22
    Description: On May 14, 2019, a strong Mw = 7.6 shallow earthquake occurred in Papua New Guinea. This paper explores for the first time the analysis of total electron content (TEC) products measured for 6 months by GPS antenna onboard Swarm satellites, to detect possible seismo-ionospheric anomalies around the time and location of the above-mentioned earthquake. The night-time vertical total electron content (VTEC) time series measured using Swarm satellites Alpha and Charlie, inside the earthquake Dobrovolsky’s area show striking anomalies 31 and 35 days before the event. We successfully verified the possible presence of concomitant anomalous values of in situ electron density detected by the new Chinese satellite dedicated to search for electromagnetic earthquake precursors [China Seismo-Electromagnetic Satellite (CSES)-01]. On the other hand, the analysis of VTEC night time measured by Swarm Bravo shows gradual and abnormal increase of the VTEC parameter from about 23 days before the earthquake, which descends 3 days before the earthquake and reaches its lowest level around the earthquake day. We also analyzed the time series and tracks of other six in situ parameters measured by Swarm satellites, electron density from CSES, and also GPS-TEC measurements. As it is expected from the theory, the electron density anomalous variations acknowledge the Swarm VTEC anomalies, confirming that those anomalies are real and not an artifact of the analysis. The comparative analysis with measurements of other Swarm and CSES sensors emphasizes striking anomalies about 2.5 weeks before the event, with a clear pattern of the whole anomalies typical of a critical system as the earthquake process is for Earth. A confutation analysis outside the Dobrovolsky area and without significant seismicity shows no anomalies. Therefore based on our study, the VTEC products of Swarm satellites could be an appropriate precursor aside from the other measured plasma and magnetic parameters using Alpha, Bravo, and Charlie Swarm and CSES satellites that can be simultaneously analyzed to reduce the overall uncertainty.
    Description: Published
    Description: 820189
    Description: 7T. Variazioni delle caratteristiche crostali e "precursori"
    Description: JCR Journal
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  • 10
    Publication Date: 2022-02-17
    Description: Forecasting earthquakes is a challenging scientific task, due to the intrinsic complexity of the problem, as well as to the limited size and different accuracy of available observations. During the last decades increasing efforts have been devoted by geophysical research in an attempt to answer the following fundamental questions: 1) Which are the physical processes that take place in the Earth crust that are relevant for an earthquake to nucleate? 2) How can we observe, describe and model them statistically and physically? Although a clear univocal picture is still missing, a large amount of data and long-term observations accumulated over the time, as well as new methodological approaches, which eventually allow for development and verification of theoretical models. Observations and physical models suggest that several processes in the Earth’s lithosphere are predictable, but after substantial averaging and up to a limit. Accordingly, earthquake forecasting requires a holistic approach, and should be posed as an integrated, multi-scale process, narrowing down the magnitude range, territory, and time of expectation, all within the limits imposed by physics and data uncertainties. The understanding of governing laws, from long-term tectonic loading and slow nucleation to rapid rupture propagation, may contribute to estimate the stress state and temporal evolution of geophysical observables around seismically active areas.
    Description: Published
    Description: 793911
    Description: 7T. Variazioni delle caratteristiche crostali e "precursori"
    Description: JCR Journal
    Keywords: earthquake preparation processes, stress field variations, earthquake source physics, earthquake forecasting, test site areas ; 04.07. Tectonophysics
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  • 11
    Publication Date: 2022-02-24
    Description: Changbai Mountains intraplate volcanism (NE China) developed above the 500 km deep stagnant portion of the Pacific slab in the last 20 Ma. The more recent activity includes a shieldforming stage (2.8–0.3Ma), the Tianchi cone construction stage (1.5–0.01Ma), and a calderaforming stage (0.2Ma-present). Detailed studies on the petrogenesis of the volcanic products between the first two stages and the possible role of geodynamics and local tectonics in controlling the volcanism, however, are lacking. Here, we present structural and whole-rock geochemical and zircon Hf isotopic data on Pleistocene dikes of the Changbai Mountains at the transition from the shield-forming to the Tianchi stage with the aim to constrain their age and the source(s) of their parental magma. The dikes represent the shallower feeding system of monogenetic cones and have a NW-SE strike, which is also the preferred strike of the major fault affecting the area and along which the Changbai Mountains monogenetic scoria cones align. The dikes have a potassic affinity and a trachybasaltic composition. Their zircon U–Pb age is 1.19–1.20Ma (Calabrian). The trachybasalts are enriched in Rb, Ba, Th, U, Nb, Ta, K, Pb, and LREE and slightly depleted in Sr, Zr, Hf, Ti, and HREE with a weak negative Eu/Eu* (δEu 0.96–0.97). Trace elements and isotopic compositions are compatiblewith anOIB-type source with an EMI signature. The calculated (87Sr/86Sr)i ( 0.705165–0.705324), (143Nd/ 144Nd)i ( 0.512552–0.512607, εNd(t) −0.58 to −1.65), and Hf model ages (TDM2) of 1768–1562 Ma suggest that the trachybasaltic dikes were contaminated by a Mesoproterozoic, relatively basic lower crust. The source of the Calabrian trachybasalts consists of asthenospheric melts modified by a subcontinental lithospheric mantle. These melts upwell from depth and stop at the crust-mantle interface where underplating processes favor the assimilation of ancient lower crust material. During the ascent to the surface along deep-seated crustal discontinuities, these magmas weakly differentiate.
    Description: Published
    Description: 729905
    Description: 2V. Struttura e sistema di alimentazione dei vulcani
    Description: JCR Journal
    Keywords: Changbaishan ; mantle source ; 04.04. Geology ; 04.01. Earth Interior
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 12
    Publication Date: 2022-02-25
    Description: Lactobacilli are the dominant members of the healthy human vaginal microbiota and represent the first defense line from pathogen infection, including vulvovaginal candidiasis. Biofilm is the predominant microbial growth form in nature, and the formation of biofilms inside the human body has important implications in health and disease. In particular, the formation of biofilm by members of the human resident microbiota is desirable, as it can improve microbial persistence and influence functionality. In the present study, we investigated the capability of 16 vaginal Lactobacillus strains (belonging to Lactobacillus crispatus, Lactobacillus gasseri, Lactobacillus vaginalis, and Lactobacillus plantarum species) to form biofilms, and we correlated their mode of growth to anti-Candida activity. L. plantarum strains were the best biofilm producers, and high variability was registered in the level of biofilm formation among L. crispatus and L. gasseri strains. Culture supernatants derived from Lactobacillus biofilm and planktonic growth were tested toward a panel of Candida clinical isolates (Candida albicans, Candida glabrata, Candida lusitaniae, Candida tropicalis, Candida krusei, and Candida parapsilosis) and their metabolome assessed by 1H-NMR. L. crispatus and L. plantarum strains exhibited the best fungistatic profile, and biofilms enhanced their anti-Candida activity; on the contrary, L. gasseri strains were more effective when grown in a planktonic mode. Biofilm/planktonic mode of growth also affects Lactobacillus metabolism, mainly influencing nitrogen and amino acid pathways, and anti-Candida activity is instead strictly related to carbohydrate metabolism. The present study underlined the strict interdependence between microbial mode of growth, metabolism, and functional properties. Biofilm formation by members of the healthy human microbiota represents a crucial issue in the field of microbial physiology and host-microbiota interactions, beyond supporting the development of new antimycotic strategies based on probiotics grown in adherence.
    Description: Published
    Description: 750368
    Description: 3IT. Calcolo scientifico
    Description: JCR Journal
    Keywords: Candida; Lactobacillus; biofilm; health benefits; metabolome; vaginal microbiota ; PCA ; cluster analysis ; 05.06. Methods
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  • 13
    Publication Date: 2022-02-10
    Description: No abstract
    Description: Published
    Description: 822481
    Description: 5T. Sismologia, geofisica e geologia per l'ingegneria sismica
    Description: JCR Journal
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  • 14
    Publication Date: 2022-02-14
    Description: Marine seismic reflection data coupled with on-land structural measurements improve our knowledge about the active deformation pattern of the northern sector of the Malta Escarpment, a bathymetric and structural discontinuity in the near-offshore of Eastern Sicily. As favourably oriented to be reactivated within the Neogene Africa–Europe convergence, it is believed that the Malta Escarpment has a significant role in the recent seismotectonic framework of the Western Ionian Basin and the Hyblean foreland domain of SE Sicily, where some of the largest and most destructive Mediterranean earthquakes are located according to available historical catalogs. Offshore seismic data along with bathymetric grids illuminate the shallow subseafloor setting and allow more accurate mapping of the seafloor expression of previously identified faults in the area. The seismic interpretation and the nearfault sediment pattern analysis provide constraints on fault 3D geometries as well as on their through-time tectonic activity, suggesting also that part of the observed deformation may have been caused by nontectonic processes. Identified faults form currently an E-dipping, roughly N–S trending, and 60 km-long extensional belt deforming the seafloor with a significant displacement amount in the Ionian offshore between Catania and Siracusa. 3-dimensional parameters of faults were then used to derive expected magnitudes and their reactivation propensity. Empirical scaling relationships and forward methods point to a high seismic potential for the detected fault as well as predict the fault slip behavior according to the fieldderived differential stress. This combined analysis along with faults displacement measurements pointed out how the longest and most continuous fault could be capable of generating M 〉 7 seismic events, putting forward strong seismotectonic implications for the adjacent and densely populated Hyblean Plateau. The expected magnitude and the estimated recurrence time interval are compatible with those inferred for large historical earthquakes in the area even if other offshore seismic sources cannot be ruled out.
    Description: Published
    Description: 594176
    Description: 2T. Deformazione crostale attiva
    Description: JCR Journal
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  • 15
    Publication Date: 2022-02-14
    Description: A tomographic analysis of Mt. Pollino area (Italy) has been performed using earthquakes recorded in the area during an intense seismic sequence that occurred between 2010 and 2014. 870 local earthquakes with magnitude ranging from 1.8 to 5.0 were selected considering the number of recording stations, the signal quality, and the hypocenter distribution. P- and S-wave arrival times were manually picked and used to compute 3D velocity models through tomographic seismic inversion. The resulting 3D distributions of VP and VS are characterized by high resolution in the central part of the investigated area and from surface to about 10 km below sea level. The aim of the work is to obtain high- quality tomographic images to correlate with the main lithological units that characterize the study area. The results will be important to enhance the seismic hazard assessment of this complex tectonic region. These images show the ductile Apennine platform (VP = 5.3 km/s) overlaying the brittle Apulian platform (VP=6.0 km/s) at depth of around 5 km. The central sector of the area shows a clear fold and thrust interface. Along this structure,most of the seismicity occurred, including the strongest event of the sequence (M W 5.0). High V P (〉6.8 km/s) and high V P /VS (〉1.9) patterns, intersecting the southern edge of this western seismogenic volume, have been interpreted as water saturated rocks, in agreement with similar geological context in the Apennines. These fluids could have played a role in nucleation and development of the seismic sequence. A recent study revealed the occurrence of clusters of earthquakes with similar waveforms along the same seismogenic volume. The hypocenters of these cluster events have been compared with the events re-located in this work. Jointly, they depict a 10 km × 4 km fault plane, NW-SE oriented, deepening towards SW with a dip angle of 40–45° . Instead, the volume of seismicity responsible for the M L 4.3 earthquake developed as a mainshock-aftershock sequence, occurring entirely within the average-to-low VP /VS Apennine platform. Our results agree with other independent geophysical analyses carried out in this area, and they could significantly improve the actual knowledge of the main lithologic units of this complex tectonic area.
    Description: Published
    Description: 735340
    Description: 4T. Sismicità dell'Italia
    Description: JCR Journal
    Keywords: elocity tomography, crustal structure, seismic sequence, geodynamics and seismicity, Italian Apennine, Pollino, seismic gap
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  • 16
    Publication Date: 2022-01-03
    Description: Dikes feed most eruptions, so understanding their mechanism of propagation is fundamental for volcanic hazard assessment. The variation in geometry of a propagating dike as a function of the injection rate remains poorly studied. Here we use experiments injecting water into gelatin to investigate the variation of the thickness, width and length of a flux-driven dike connected to its source as a function of the injection time and intruded volume. Results show that the thickness of vertically propagating dikes is proportional to the injection rate and remains constant as long as the latter is constant. Neither buoyancy nor injected volume influence the thickness. The along-strike width of the dike is, however, proportional to the injected volume. These results, consistent with the inferred behavior of several dikes observed during emplacement, open new opportunities to better understand how dikes propagate and also to forecast how emplacing dikes may propagate once their geometric features are detected in real-time through monitoring data.
    Description: Published
    Description: 665865
    Description: 4V. Processi pre-eruttivi
    Description: JCR Journal
    Keywords: Relating Dike Geometry and Injection Rate in Analogue Flux-Driven Experiments
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 17
    Publication Date: 2022-02-02
    Description: Traditional tsunami catalogues are conceived as a collection of tsunamis classified by the generating cause, providing a general description of the effects observed for each tsunami. Those catalogues, even if they provide fundamental information, are not suitable for producing an exhaustive picture of the geographical distribution of the tsunami effects. In this paper we introduce the new Italian Tsunami Effects Database (ITED), a collection of evidence documenting the effects along the Italian coasts from historical times to present. The database comes forth the Euro-Mediterranean Tsunami Catalogue (EMTC) and focusses on the effects of tsunamis observed along the Italian coasts providing descriptive and quantitative information for each OP. The information reported in ITED does not only concern the effects produced by Italian tsunamis, but also those effects produced by tsunamis originated outside the Italian territory. ITED contains 318 OPs, related to 73 Italian tsunamis and to four tsunamis which occurred outside Italy. The database can be accessed through aWebApp that displays for each OP the description of effects, quantitative data (run-up, inundation, withdrawal, etc.) and tsunami intensity with the corresponding bibliographic references. The database also provides the tsunami intensity distribution along time (tsunami-history) for each site, allowing the end user to know how a place has been affected by tsunamis over the time. The information contained in ITED makes this database a useful tool to understand how tsunamis have affected the Italian territory and emphasizes the importance of studying the tsunami hazard along the Italian coasts.
    Description: Published
    Description: 596044
    Description: 6T. Studi di pericolosità sismica e da maremoto
    Description: JCR Journal
    Keywords: tsunami ; tsunami effects ; historical tsunami ; Italian coasts ; tsunami intensity ; tsunami hazard ; tsunami history ; 05.02. Data dissemination
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  • 18
    Publication Date: 2022-02-02
    Description: Extreme environments are excellent places to find microorganisms capable of tolerating extreme temperature, pH, salinity pressure, and elevated concentration of heavy metals and other toxic compounds. In the last decades, extremophilic microorganisms have been extensively studied since they can be applied in several fields of biotechnology along with their enzymes. In this context, the characterization of heavy metal resistance determinants in thermophilic microorganisms is the starting point for the development of new biosystems and bioprocesses for environmental monitoring and remediation. This work focuses on the isolation and the genomic exploration of a new arsenic-tolerant microorganism, classified as Alicyclobacillus mali FL18. The bacterium was isolated from a hot mud pool of the solfataric terrains in Pisciarelli, a well-known hydrothermally active zone of the Campi Flegrei volcano near Naples in Italy. A. mali FL18 showed a good tolerance to arsenite (MIC value of 41 mM), as well as to other metals such as nickel (MIC 30 mM), cobalt, and mercury (MIC 3 mM and 17 μM, respectively). Signatures of arsenic resistance genes (one arsenate reductase, one arsenite methyltransferase, and several arsenite exporters) were found interspersed in the genome as well as several multidrug resistance efflux transporters that could be involved in the export of drugs and heavy metal ions. Moreover, the strain showed a high resistance to bacitracin and ciprofloxacin, suggesting that the extreme environment has positively selected multiple resistances to different toxic compounds. This work provides, for the first time, insights into the heavy metal tolerance and antibiotic susceptibility of an Alicyclobacillus strain and highlights its putative molecular determinants.
    Description: Published
    Description: 639697
    Description: 6SR VULCANI – Servizi e ricerca per la società
    Description: JCR Journal
    Keywords: arsenic resistance system ; bioremediation; ; toxic metals ; genomic sequencing and annotation; ; thermophilic microorganism; ; geothermal environment;
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 19
    Publication Date: 2022-01-03
    Description: A main challenge in open conduit volcanoes is to detect and interpret the ultra-small strain (〈10–6) associated with minor but critical eruptions such as the lava fountains. Two years after the flank eruption of December 2018, Etna generated a violent and spectacular eruptive sequence of lava fountains. There were 23 episodes from December 13, 2020 to March 31, 2021, 17 of which in the brief period 16 February to 31 March with an intensified occurrence rate. The high-precision borehole dilatometer network recorded significant strain changes in the forerunning phase of December 2020 accompanying the final magma migration at the shallower levels, and also during the single lava fountains and during the entire sequence. The source modeling provided further information on the shallow plumbing system. Moreover, the strain signals also gave useful information both on the explosive efficiency of the lava fountains sequence and the estimate of erupted volume. The high precision borehole dilatometers confirm to be strategic and very useful tool, also to detect and interpret ultra-small strain changes associated with explosive eruptions, such as lava fountains, in open conduit volcanoes.
    Description: Published
    Description: 740505
    Description: 5V. Processi eruttivi e post-eruttivi
    Description: JCR Journal
    Keywords: etna volcano ; lava fountains ; volcano monitoring ; borehole strainmeters ; eruption modeling ; Magma Migration at Shallower Levels and Lava Fountains Sequence as Revealed by Borehole Dilatometers on Etna Volcano
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 20
    Publication Date: 2022-01-11
    Description: We compile existing seismic, gravity, radar and magnetic data, together with the subglacial bedrock relief from the BEDMACHINE project, to build the most detailed sediment model for Antarctica. We interpolate these data according to a tectonic map of Antarctica using a statistical kriging method. Our results reveal significant sediment accumulation in Antarctica with several types of sedimentary basins: parts of the Beacon Supergroup and more recent rifting basins. The basement relief closely resembles major geological and tectonic structures. The thickness of sediments has significant variations around the continent, and depends on the degree of crustal extension. West Antarctica has wide sedimentary basins: the Ross basin (thickness 2–6 km), the Filchner-Ronne basin (2–12 km) with continuations into East Antarctica, the Bentley Subglacial Trench and the Byrd basin (2–4 km). The deepest Filchner-Ronne basin has a complex structure with multi-layered sediments. East Antarctica is characterized by vast sedimentary basins such as the Pensacola-Pole (1–2 km), Coats Land (1–3 km), Dronning Maud Land (1–2 km), Vostok (2–7 km), Aurora (1–3 km), Astrolabe (2–4 km), Adventure (2–4 km), and Wilkes (1–4 km) basins, along with narrow deep rifts filled by sediments: JutulStraumen (1–2 km), Lambert (2–5 km), Scott, Denman, Vanderford and Totten (2–4 km) rifts. The average thickness of sediments for the whole continent is about 0.77 km. The new model, ANTASed, represents a significant improvement over CRUST 1.0 for Antarctica, and reveals new sedimentary basins. Differences between ANTASed and CRUST 1.0 reach +12/−3 km.
    Description: Published
    Description: 722699
    Description: 1T. Struttura della Terra
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 21
    Publication Date: 2022-02-11
    Description: Thermohaline staircases are a well-known peculiar feature of the Tyrrhenian Sea. Generated by extensive double diffusion processes fueled by lateral intrusions, they are considered to be the most stable of all the staircases that have been detected in the world ocean, seeing their persistence of more than 40 years in the literature. Double diffusion leads to efficient vertical mixing, potentially playing a significant role in guiding the diapycnal mixing. The present study investigates this process of mixing in the case of the Tyrrhenian staircases by calculating the heat and salt fluxes in their gradient zones (interfaces) and the resulting net fluxes in adjacent layers using hydrological profiles collected from 2003 to 2016 at a station in the heart of the basin interior. The staircases favor downward fluxes of heat and salt, and the results of the calculations show that these are greater where temperature and salinity gradients are also high. This condition is more frequently encountered at thin and sharp interfaces, which sometimes appear as substructures of the thicker interfaces of the staircases. These substructures are hot spots where vertical fluxes are further accentuated. Due to the increasing salt and heat content of the Levantine Intermediate Water (LIW) during the observation period, a rise in the values of the fluxes was noted in the portion of the water column below it down to about 1800 m. The data furthermore show that internal gravity waves can modulate the structure of the staircases and very likely contribute to the mixing, too, but the sampling frequency of the time series is too large to permit a proper assessment of these processes. It is shown that, at least during the period of observation, the fluxes due to salt fingers do not reach the bottom layer but remain within the staircases.
    Description: Published
    Description: 672437
    Description: 4A. Oceanografia e clima
    Description: JCR Journal
    Keywords: Tyrrhenian Sea ; thermohaline staircases ; salt fingers ; diapycnal mixing ; heat and salt fluxes ; 03.03. Physical
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 22
    Publication Date: 2022-02-11
    Description: Editorial article
    Description: Seismic activity (e.g., earthquakes, tremors) beneath volcanic areas is primarily caused by the dynamic interaction of molten rock and hydrothermal fluids with the solid host rock, by fracturing and fragmentation of the magma itself, and by tectonic processes interacting with the volcano. In addition, near-surface phenomena such as explosions and rockfalls at a volcanic edifice also produce seismic events. At volcano observatories globally, the real-time monitoring of the spatial and temporal patterns of seismic events is an essential geophysical tool to quantify the state of unrest, and forecast eruptions successfully. Seismic waveforms, earthquake catalogues and earthquake ray-path properties commonly supplement this tool to model the complex processes responsible for the earthquakes quantitatively, and to image subsurface magmatic and tectonic structures. Independent constraints provided by other disciplines such as geodesy and structural geology also significantly help scientists to understand the volcanic processes. Recent advances in earthquake recording technology, computing power and algorithms in artificial intelligence, allow processing and interpretation of large and complex multi-parametric datasets and scenarios.
    Description: Published
    Description: 829460
    Description: 4V. Processi pre-eruttivi
    Description: JCR Journal
    Keywords: earthquake swarms ; volcanic areas ; 04.08. Volcanology ; 04.06. Seismology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 23
    Publication Date: 2022-02-11
    Description: Settling-driven gravitational instabilities observed at the base of volcanic ash clouds have the potential to play a substantial role in volcanic ash sedimentation. They originate from a narrow, gravitationally unstable region called a Particle Boundary Layer (PBL) that forms at the lower cloud-atmosphere interface and generates downward-moving ash fingers that enhance the ash sedimentation rate. We use scaled laboratory experiments in combination with particle imaging and Planar Laser Induced Fluorescence (PLIF) techniques to investigate the effect of particle concentration on PBL and finger formation. Results show that, as particles settle across an initial density interface and are incorporated within the dense underlying fluid, the PBL grows below the interface as a narrow region of small excess density. This detaches upon reaching a critical thickness, that scales with (Formula presented.), where (Formula presented.) is the kinematic viscosity and (Formula presented.) is the reduced gravity of the PBL, leading to the formation of fingers. During this process, the fluid above and below the interface remains poorly mixed, with only small quantities of the upper fluid phase being injected through fingers. In addition, our measurements confirm previous findings over a wider set of initial conditions that show that both the number of fingers and their velocity increase with particle concentration. We also quantify how the vertical particle mass flux below the particle suspension evolves with time and with the particle concentration. Finally, we identify a dimensionless number that depends on the measurable cloud mass-loading and thickness, which can be used to assess the potential for settling-driven gravitational instabilities to form. Our results suggest that fingers from volcanic clouds characterised by high ash concentrations not only are more likely to develop, but they are also expected to form more quickly and propagate at higher velocities than fingers associated with ash-poor clouds.
    Description: Published
    Description: 640090
    Description: 5V. Processi eruttivi e post-eruttivi
    Description: JCR Journal
    Keywords: PLIF ; analogue experiments ; ash concentration ; settling-driven gravitational instabilities ; tephra sedimentation ; volcanic ash clouds ; 04.08. Volcanology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 24
    Publication Date: 2022-02-08
    Description: Volcano dynamics results from an interplay between internal and external processes spanning different time scales. Unravelling how such processes interact may provide key insights into the mechanisms that may lead to the destabilization of the volcanoes and eruption, a critical information to forecast hazards. Studies dealing with tidal influence on volcanoes fall within this context, yet the cause-effect relationship between tides and eruptions is still poorly understood. In the present study, we investigate the tidal influence on two nearby volcanoes, Ischia and Campi Flegrei (Italy), characterized by intense hydrothermal activity. We analyze the seismic tremor of hydrothermal origin recorded by four seismic stations between January and June 2020 by using Singular Spectrum Analysis. We detect up to five long term tidal periodicities ranging from ∼5 to ∼29 days. The results indicate that the seismic tremor is modulated by Earth tides at both volcanoes. In addition, differences in phase and amplitude modulation between the response of both hydrothermal systems to tidal forcing reveal specific features related to the tremor source and to properties of the surrounding medium. These phenomena indicate an interplay between solid Earth and the dynamics of these two volcanoes. Similar approaches on hydrothermal systems at volcanoes would contribute to better characterize the hydrothermal circulation and their evolving conditions that may represent a precursor of a new phase of activity.
    Description: Published
    Description: 775269
    Description: 4V. Processi pre-eruttivi
    Description: JCR Journal
    Keywords: Campi Flegrei ; Ischia ; seismic tremor ; hydrothermal activity ; tidal modulation ; SSA ; 04.08. Volcanology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 25
    Publication Date: 2022-02-11
    Description: Geophysical surveys in the eastern slope of the Gela Basin (Strait of Sicily, central Mediterranean) contributed to the identification of several episodes of sediment mass transport, recorded by scars and deposits of various dimensions within the Pleistocene succession. In addition to a huge failure called Gela Slide with volume exceeding 600 km3, the most studied events show volumes estimated between 0.5 and 1.5 km3, which is common to many other submarine landslide deposits in this region and that can therefore be considered as a characteristic value. In this work, the tsunamigenic potential of two of such landslides, the so-called Northern Twin Slide and South Gela Basin Slide located about 50 km apart along the eastern slope of the Gela Basin, are investigated using numerical codes that describe the onset and motion of the slide, as well as the ensuing tsunami generation and propagation. The results provide the wave height of these tsunami events on the coast of southern Sicily and Malta and can be taken as representative of the tsunamigenic potential of typical landslides occurring along the slope of the Gela Basin.
    Description: Published
    Description: 602171
    Description: 2T. Deformazione crostale attiva
    Description: JCR Journal
    Keywords: tsunami ; landslide ; hydrosphere
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 26
    Publication Date: 2022-02-10
    Description: The Joint Task Force, Science Monitoring And Reliable Telecommunications (JTF SMART) Subsea Cables, is working to integrate environmental sensors for ocean bottom temperature, pressure, and seismic acceleration into submarine telecommunications cables. The purpose of SMART Cables is to support climate and ocean observation, sea level monitoring, observations of Earth structure, and tsunami and earthquake early warning and disaster risk reduction, including hazard quantification. Recent advances include regional SMART pilot systems that are the first steps to trans-ocean and global implementation. Examples of pilots include: InSEA wet demonstration project off Sicily at the European Multidisciplinary Seafloor and water column Observatory Western Ionian Facility; New Caledonia and Vanuatu; French Polynesia Natitua South system connecting Tahiti to Tubaui to the south; Indonesia starting with short pilot systems working toward systems for the Sumatra-Java megathrust zone; and the CAM-2 ring system connecting Lisbon, Azores, and Madeira. This paper describes observing system simulations for these and other regions. Funding reflects a blend of government, development bank, philanthropic foundation, and commercial contributions. In addition to notable scientific and societal benefits, the telecommunications enterprise’s mission of global connectivity will benefit directly, as environmental awareness improves both the integrity of individual cable systems as well as the resilience of the overall global communications network. SMART cables support the outcomes of a predicted, safe, and transparent ocean as envisioned by the UN Decade of Ocean Science for Sustainable Development and the Blue Economy. As a continuation of the OceanObs’19 conference and community white paper (Howe et al., 2019, doi: 10.3389/fmars.2019.00424), an overview of the SMART programme and a description of the status of ongoing projects are given.
    Description: Published
    Description: 775544
    Description: 3A. Geofisica marina e osservazioni multiparametriche a fondo mare
    Description: JCR Journal
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  • 27
    Publication Date: 2022-09-15
    Description: The abundance of mantle-derived rocks and lavas, in combination with its tectonic evolution, render Mexico a perfect laboratory to investigate the chemical and the isotopic heterogeneity of the lithospheric mantle. New data on the composition of noble gases and CO2 in Mexican mantle xenoliths and lavas is reported. Our samples consist of six ultramafic nodules from the Durango Volcanic Field (DVF) and the San Quintin Volcanic Field (SQVF), monogenetic complexes belonging to the Mexican Basin and Range province; and four lavas from the Sierra Chichinautzin (SCN), a Quaternary monogenetic volcanic field located in the Mexican volcanic arc. Ne and Ar isotopes in fluid inclusions reveal mixing between atmospheric and MORB-like fluids (e.g., 40Ar/36Ar 〈 1,200). DVF and SQVF nodules record low 40Ar/36Ar and 4He/20Ne that confirm the existence of recycled atmospheric-derived noble gases in the local mantle. The averages of the Rc/Ra ratios (3He/4He corrected for atmospheric contamination) measured in Mexican localities are within the MORB-like range: DVF= 8.39 ± 0.24 Ra, SQVF = 7.43 ± 0.19 Ra and SCN lavas = 7.15 ± 0.33 Ra (1σ). With the aim of assessing the isotopic variability of the Mexican lithospheric mantle, the above results were compared with similar data previously obtained from ultramafic nodules found in the Ventura Espiritu Santo Volcanic Field (VESVF), another Quaternary monogenetic volcanic complex belonging the Basin and Range. The higher 3He/4He ratios in DVF relative to those reported for the VESVF and the SQVF are explained as reflecting different ages of mantle refertilization, triggered by the retreating of the Farallon slab (~40 Ma ago) and associated delamination slab processes. We propose that the DVF mantle was refertilized more recently (〈10 Ma ago) than the mantle beneath the SQVF and VESVF (~40–20 Ma ago). On the other hand, He-Ne- Ar compositions of SCN olivines share similarities with VESVF xenoliths,suggesting a relatively homogeneous lithospheric mantle in central Mexico. Finally, DVF and the SCN samples exhibit δ13C values within the MORB range (comparable to other values previously reported in fluid inclusions and fumaroles from Popocatépetl, Colima—Ceboruco volcanoes). While we explain the MORB-like carbon signatures of the DVF samples as the result of the above-mentioned refertilization process, the SCN signatures likely reflect either (i) trapping of isotopically fractionated CO2 derived from magmatic degassing or (ii) a mantle source unaffected by subduction-related crustal carbon recycling.
    Description: Published
    Description: 973645
    Description: 2V. Struttura e sistema di alimentazione dei vulcani
    Description: 3V. Proprietà chimico-fisiche dei magmi e dei prodotti vulcanici
    Description: 4V. Processi pre-eruttivi
    Description: JCR Journal
    Keywords: Basin and Range province ; Trans-mexican Volcanic Belt ; Mexican mantle xenoliths ; arc lavas ; fluid inclusions ; noble gas isotopes ; CO2 isotopes ; carbon recycling ; 04.08. Volcanology
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  • 28
    Publication Date: 2022-09-23
    Description: For active volcanoes, knowledge about probabilities of eruption and impacted areas becomes valuable information for decision-makers to develop short- and long-term emergency plans, for which probabilistic volcanic hazard assessment (PVHA) is needed. High-resolution or spatially extended PVHA requires extreme-scale high-performance computing systems. Within the framework of ChEESE (Center of Excellence for Exascale in Solid Earth; www.cheese-coe.eu), an effort was made to generate exascale-suitable codes and workflows to collect and process in some hours the large amount of data that a quality PVHA requires. To this end, we created an optimized HPC-based workflow coined PVHA_HPC-WF to develop PVHA for a volcano. This tool uses the Bayesian event tree methodology to calculate eruption probabilities, vent-opening location(s), and eruptive source parameters (ESPs) based on volcano history, monitoring system data, and meteorological conditions. Then, the tool interacts with the chosen hazard model, performing a simulation for each ESP set or volcanic scenario (VS). Finally, the resulting information is processed by proof-of-concept-subjected high-performance data analytics (HPDA) scripts, producing the hazard maps which describe the probability over time of exceeding critical thresholds at each location in the investigated geographical domain. Although PVHA_HPC-WF can be adapted to other hazards, we focus here on tephra (i.e., lapilli and ash) transport and deposition. As an application, we performed PVHA for Campi Flegrei (CF), Italy, an active volcano located in one of the most densely inhabited areas in Europe and under busy air traffic routes. CF is currently in unrest, classified as being in an attention level by the Italian Civil Protection. We consider an approximate 2,000 × 2,000 × 40 km computational domain with 2 km grid resolution in the horizontal and 40 vertical levels, centered in CF. To explore the natural variability and uncertainty of the eruptive conditions, we consider a large number of VSs allowing us to include those of low probability but high impact, and simulations of tephra dispersal are performed for each of them using the FALL3D model. Results show the potential of HPC to timely execute a vast range of simulations of complex numerical models in large high-resolution computational domains and analyze great volumes of data to obtain quality hazard maps.
    Description: Published
    Description: 941789
    Description: 6V. Pericolosità vulcanica e contributi alla stima del rischio
    Description: JCR Journal
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  • 29
    Publication Date: 2022-10-14
    Description: Assessing the variations in space and time of groundwater circulation in volcanic islands is of paramount importance to the description of the hydro-geo-thermal system and implementation of hydrogeological, geochemical, and volcanic monitoring systems. In fact, the reliable reconstruction of the groundwater potentiometric surface in such composite volcanic aquifer systems can enable the identification of the most advantageous strategies for both the sustainable use of groundwater resources and the management of volcanic risk. Geographical Information System (GIS) platforms can support the integration and analysis of many spatial and temporal variables derived from monitoring of active volcanoes and the elaboration of spatially continuous data. However, open issues still affect the reliability and general applicability of common spatial interpolation methods in the case of groundwater potentiometric surfaces. This is related to the assessment of the main stratigraphic and volcano-tectonic features affecting the hydraulic head changes. With regard to the dynamically very active Ischia Island (Italy), this study illustrates a GIS-based hydrogeological approach to identify the most accurate interpolation method for mapping the potentiometric surface in complex hydrogeological terrains. The proposed approach has been applied to the existing dataset (1977–2003) stored by Istituto Nazionale di Geofisica e Vulcanologia. Based on a careful geological and hydrogeological survey, a total of 267 wells, from 5 to 250 m in depth, were processed. The data pre-processing involved four meteorological time-series data (1922–1997) and six long records of piezometric water levels (1930–1994). As a result, knowledge of the delineation of rather homogeneous stratigraphic and volcano-tectonic structures at the basin-scale has improved. Thus, new, more reliable potentiometric surfaces of the four main geothermal areas closest to the coast were produced during both dry and wet seasons. The reliability of the processed potentiometric surface was then validated by comparing the spatially continuous data with complementary field data. These findings point toward an optimal interpolation approach for representing the seasonal and areal distribution of main hydrogeological parameters in complex aquifer systems. Finally, insights into variations of hydrological behavior at an active volcanic area will foster an understanding of possible involvement of fresh and thermal waters in triggering phreatic explosions.
    Description: Published
    Description: 883719
    Description: 2V. Struttura e sistema di alimentazione dei vulcani
    Description: 6V. Pericolosità vulcanica e contributi alla stima del rischio
    Description: JCR Journal
    Keywords: groundwater map ; hydrothermal system ; conceptual model ; volcanic island hydrogeology ; spatial interpolation ; GIS ; Ischia Island
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 30
    Publication Date: 2022-11-15
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Shero, M. R., Kirkham, A. L., Costa, D. P., & Burns, J. M. Iron mobilization during lactation reduces oxygen stores in a diving mammal. Nature Communications, 13(1), (2022): 4322, https://doi.org/10.1038/s41467-022-31863-7.
    Description: The profound impacts that maternal provisioning of finite energy resources has on offspring survival have been extensively studied across mammals. This study shows that in addition to calories, high hemoprotein concentrations in diving mammals necessitates exceptional female-to-pup iron transfer. Numerous indices of iron mobilization (ferritin, serum iron, total-iron-binding-capacity, transferrin saturation) were significantly elevated during lactation in adult female Weddell seals (Leptonychotes weddellii), but not in skip-breeders. Iron was mobilized from endogenous stores for incorporation into the Weddell seal’s milk at concentrations up to 100× higher than terrestrial mammals. Such high rates of iron offload to offspring drew from the female’s own heme stores and led to compromised physiologic dive capacities (hemoglobin, myoglobin, and total body oxygen stores) after weaning their pups, which was further reflected in shorter dive durations. We demonstrate that lactational iron transfer shapes physiologic dive thresholds, identifying a cost of reproduction to a marine mammal.
    Description: This research was conducted with support from NSF ANT-0838892 to DPC; ANT-0838937 and ANT-1246463 to JMB (which also supported ALK and MRS); and The Investment in Science Fund at WHOI to MRS.
    Keywords: Animal physiology ; Ecophysiology ; Homeostasis
    Repository Name: Woods Hole Open Access Server
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  • 31
    Publication Date: 2022-11-18
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Shu, Y., Nielsen, S. G., Le Roux, V., Wörner, G., Blusztajn, J., & Auro, M. Sources of dehydration fluids underneath the Kamchatka arc. Nature Communications, 13(1), (2022): 4467, https://doi.org/10.1038/s41467-022-32211-5.
    Description: Fluids mediate the transport of subducted slab material and play a crucial role in the generation of arc magmas. However, the source of subduction-derived fluids remains debated. The Kamchatka arc is an ideal subduction zone to identify the source of fluids because the arc magmas are comparably mafic, their source appears to be essentially free of subducted sediment-derived components, and subducted Hawaii-Emperor Seamount Chain (HESC) is thought to contribute a substantial fluid flux to the Kamchatka magmas. Here we show that Tl isotope ratios are unique tracers of HESC contribution to Kamchatka arc magma sources. In conjunction with trace element ratios and literature data, we trace the progressive dehydration and melting of subducted HESC across the Kamchatka arc. In succession, serpentine (〈100 km depth), lawsonite (100–250 km depth) and phengite (〉250 km depth) break down and produce fluids that contribute to arc magmatism at the Eastern Volcanic Front (EVF), Central Kamchatka Depression (CKD), and Sredinny Ridge (SR), respectively. However, given the Tl-poor nature of serpentine and lawsonite fluids, simultaneous melting of subducted HESC is required to explain the HESC-like Tl isotope signatures observed in EVF and CKD lavas. In the absence of eclogitic crust melting processes in this region of the Kamchatka arc, we propose that progressive dehydration and melting of a HESC-dominated mélange offers the most compelling interpretation of the combined isotope and trace element data.
    Description: This study was financially supported by grants from the National Natural Science Foundation of China (NSFC) (Grant No. 41903008) and Chinese Postdoctoral Science Foundation (Grant No. 2019M660153) to Y.S., NSF (Grant No. EAR-1829546) to S.G.N. and NSF (Grant No. EAR-1855302) to V.L.R.
    Keywords: Geochemistry ; Marine chemistry
    Repository Name: Woods Hole Open Access Server
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  • 32
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    Frontiers Media S.A.
    Publication Date: 2022-12-22
    Description: Gender equality is far from being reached in the areas of Science, Technology, Engineering, and Mathematics. Women in Earth Sciences still remain underrepresented although positive trends are recognized in the last decades. Dealing with gender inequalities in academia, however, is only part of the problem. As well as Earth Sciences need more women in leadership positions and decision-making committees, and more girls educated in the field, alike there are well-founded reasons for scientists to put attention to gender in a broader sense. According to United Nations, inadequate attention has been given how gender inequality drives disaster risks and impacts. The present contribution aims to broaden the gender perspective from improving underrepresentation in the workplace and breaking down barriers in research careers, to including gender in research content in an extensive sense. A paradigm shift is proposed from women in science to women in society, coping with gender-responsive disaster risk reduction and multiple gender dimensions in Earth Sciences. Counterbalancing present inequalities in the workplace, as well as applying a gender lens in all hazard-related activities is needed to cope with complex social systems in earthquake-prone areas. An intersectional approach and transdisciplinary research are needed.
    Description: Published
    Description: 1033321
    Description: 2TM. Divulgazione Scientifica
    Description: JCR Journal
    Keywords: gender, women, gender-responsive, disaster risk reduction, natural hazards, earthquake science ; 05.03. Educational, History of Science, Public Issues ; 05.09. Miscellaneous
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 33
    Publication Date: 2022-12-16
    Description: Communicating scientific information about earthquakes is an important and delicate issue in countries like Italy, where seismic risk is high. Furthermore, continuous and scientifically sound communication is needed, especially in recent times when social media have amplified the risk of being biased by misinformation, fake news and conspiracy theories. For this reason, we have developed a communication strategy for earthquake science and risk in Italy, mostly based on social media. The INGVterremoti platform was born between 2010 and 2012 with the goal of increasing scientific information released to the public, and also establishing a two-way communication channel between scientists and citizens. In the past 12 years, the INGVterremoti platform has gained trust and popularity, increasing the number of involved people, which amounts today to several hundred thousand. The platform consists of a coordinated suite of social media channels and a blog-magazine, where updates on ongoing earthquake sequences and posts on scientific topics are continuously published. Our end users are mostly citizens, but also authorities and media. Special attention has been given to interactions with the public, especially on our Facebook page, in order to understand their information needs, identify rumors and fake news, particularly in areas affected by seismic sequences, and address the most pressing requests. In this paper we describe the INGVterremoti strategy, the different media that we use, focusing on their strengths and weaknesses. We concentrate on the experience, carried out in the last few years, of the publication of provisional information on ongoing earthquakes, a long-standing issue strongly requested by our followers. The INGVterremoti platform has played a fundamental role in many seismic sequences of the past 12 years in Italy, starting from the Emilia sequence in 2012, to the central Italy one, started with the deadly earthquake of 24 August 2016 and still ongoing. Besides the periods of high attention after strong earthquakes, we used the INGVterremoti social media as a tool for releasing continuous and sound information to the public, and as a way to involve citizens in the communication arena.
    Description: Published
    Description: 1003867
    Description: 4TM. Web e Social
    Description: JCR Journal
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  • 34
    Publication Date: 2022-07-05
    Description: In this work we present and discuss new geodetic velocity and strain-rate fields for the Euro-Mediterranean region obtained from the analysis of continuous GNSS stations. We describe the procedures and methods adopted to analyze raw GPS observations from 〉4000 stations operating in the Euro-Mediterranean, Eurasian and African regions. The goal of this massive analysis is the monitoring of Earth’s crust deformation in response to tectonic processes, including plate- and micro-plate kinematics, geodynamics, active tectonics, earthquake-cycle, but also the study of a wide range of geophysical processes, natural and anthropogenic subsidence, sea-level changes, and hydrology. We describe the computational infrastructure, the methods and procedures adopted to obtain a threedimensional GPS velocity field, which is used to obtain spatial velocity gradients and horizontal strain-rates. We then focus on the Euro-Mediterranean region, where we discuss the horizontal and vertical velocities, and spatial velocity gradients, obtained from stations that have time-series lengths longer than 6 and 7 years, which are found to be the minimum spans to provide stable and reliable velocity estimates in the horizontal and vertical components, respectively. We compute the horizontal strain-rate field and discuss deformation patterns and kinematics along the major seismogenic belts of the Nubia-Eurasia plate boundary zone in the Mediterranean region. The distribution and density of continuous GNSS stations in our geodetic solution allow us to estimate the strain-rate field at a spatial scale of ~27 km over a large part of southern Europe, with the exclusion of the Dinaric mountains and Balkans.
    Description: The GNSS data analysis center described in this work is realized and maintained by different founding resources and projects, including EPOS-MIUR, the Department of Italian Civil Protection and Istituto Nazionale di Geofisica e Vulcanologia agreement (Annex A), Programma Operativo Nazionale (PON) GRINT, ILG Minerbio, MISE DGISSEGINGV 2020 agreement, Med-MFC. FP is supported by the project MUSE, funded by the Istituto Nazionale di Geofisica e Vulcanologia (INGV), within which the re-analysis discussed in this work has been developed.
    Description: Published
    Description: 907897
    Description: 2T. Deformazione crostale attiva
    Description: JCR Journal
    Keywords: GNSS data processing ; time series analysis ; horizontal strain rates ; vertical ground velocities ; Euro- Mediterranean region
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  • 35
    Publication Date: 2022-05-16
    Description: The island of Ischia, an active volcanic field emerging in the western sector of the Gulf of Naples (Southern Italy), represents an archetypal case of caldera that underwent a very large resurgence related to the intrusion of a shallow magma body. The resurgence culminated with the formation of a structural high in the central sector of the island, i.e., the Mt. Epomeo block. This is bordered by a system of faults along which volcanic activity occurred up to 1302 A.D., and damaging earthquakes were generated in historical and recent time. The seismicity is located prevalently in the northern sector of the island and appears to be correlated with the most recent phase (〈5 ka) of ground movement (subsidence), although the mechanism of earthquakes’ generation is still debated. By jointly analyzing offshore and onshore data (seismic profile and stratigraphy wells, respectively) and new petrological and geochemical data related to the most recent phase of volcano-tectonic activity, we develop a geological and structural layout of the northern sector of the island. In particular, we identify the seismogenic fault associated with the historical and recent destructive earthquakes of Ischia. This fault formed in the northern sector of the island during the final stage of the resurgence.We also propose a conceptual volcano-tectonic model of the northern sector of the Ischia Island, depicting the displacement of the fault zones in the off-shore area and the possible mechanism of stress loading and release in the on-shore zone, which is mainly driven by the subsidence of the Mt. Epomeo block. Our results are crucial for evaluating the dynamics of the seismogenic structures in the framework
    Description: Published
    Description: 730023
    Description: 3T. Fisica dei terremoti e Sorgente Sismica
    Description: 2V. Struttura e sistema di alimentazione dei vulcani
    Description: JCR Journal
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  • 36
    Publication Date: 2022-05-16
    Description: SOURCE utility for reprocessing, calibration, and evaluation is a software designed for web applications that permits to calibrate and validate ocean models within a selected spatial domain using in-situ observations. Nowadays, in-situ observations can be freely accessed online through several marine data portals together with the metadata information about the data provenance and its quality. Metadata information and compliance with modern data standards allow the user to select and filter the data according to the level of quality required for the intended use and application. However, the available data sets might still contain anomalous data, bad data flagged as good, due to several reasons, i.e., the general quality assurance procedures adopted by the data infrastructure, the selected data type, the timeliness of delivery, etc. In order to provide accurate model skill scores, the SOURCE utility performs a secondary quality check, or re-processing, of observations through gross check tests and a recursive statistical quality control. This first and basic SOURCE implementation uses Near Real Time moored temperature and salinity observations distributed by the Copernicus Marine Environment and Monitoring Service (CMEMS) and two model products from Istituto Nazionale di Geofisica e Vulcanologia (INGV), the first an analysis and the second a reanalysis, distributed during CMEMS phase I for the Mediterranean Sea. The SOURCE tool is freely available to the scientific community through the ZENODO open access repository, consistent with the open science principles and for that it has been designed to be relocatable, to manage multiple model outputs, and different data types. Moreover, its observation reprocessing module provides the possibility to characterize temperature and salinity variability at each mooring site and continuously monitor the ocean state. Highest quality mooring time series at 90 sites and the corresponding model values have been obtained and used to compute model skill scores. The SOURCE output also includes mooring climatologies, trends, Probability Density Functions and averages at different time scales. Model skill scores and site statistics can be used to visually inspect both model and sensor performance in Near Real Time at the single site or at the basin scale. The SOURCE utility uptake allows the interested user to adapt it to its specific purpose or domain, including for example additional parameters and statistics for early warning applications.
    Description: This work has been co-funded by the Italian RITMARE Flagship Project and the INGV internal project Relocatable integrated Cal/Val system for sea observations reprocessing and ocean models evaluation (project code 9999.526 - RL2019)
    Description: Published
    Description: 750387
    Description: 4A. Oceanografia e clima
    Description: JCR Journal
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  • 37
    Publication Date: 2022-10-14
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Marshall, T., Granger, J., Casciotti, K. L., Dahnke, K., Emeis, K.-C., Marconi, D., McIlvin, M. R., Noble, A. E., Saito, M. A., Sigman, D. M., & Fawcett, S. E. The Angola Gyre is a hotspot of dinitrogen fixation in the South Atlantic Ocean. Communications Earth & Environment, 3(1), (2022): 151, https://doi.org/10.1038/s43247-022-00474-x.
    Description: Biological dinitrogen fixation is the major source of new nitrogen to marine systems and thus essential to the ocean’s biological pump. Constraining the distribution and global rate of dinitrogen fixation has proven challenging owing largely to uncertainty surrounding the controls thereon. Existing South Atlantic dinitrogen fixation rate estimates vary five-fold, with models attributing most dinitrogen fixation to the western basin. From hydrographic properties and nitrate isotope ratios, we show that the Angola Gyre in the eastern tropical South Atlantic supports the fixation of 1.4–5.4 Tg N.a−1, 28-108% of the existing (highly uncertain) estimates for the basin. Our observations contradict model diagnoses, revealing a substantial input of newly-fixed nitrogen to the tropical eastern basin and no dinitrogen fixation west of 7.5˚W. We propose that dinitrogen fixation in the South Atlantic occurs in hotspots controlled by the overlapping biogeography of excess phosphorus relative to nitrogen and bioavailable iron from margin sediments. Similar conditions may promote dinitrogen fixation in analogous ocean regions. Our analysis suggests that local iron availability causes the phosphorus-driven coupling of oceanic dinitrogen fixation to nitrogen loss to vary on a regional basis.
    Description: This work was supported by the South African National Research Foundation (114673 and 130826 to T.M., 115335, 116142 and 129320 to S.E.F.); the US National Science Foundation (CAREER award, OCE-1554474 to J.G., OCE-1736652 to D.M.S. and K.L.C., OCE-05-26277 to K.L.C.); the German Federal Agency for Education and Research (DAAD-SPACES 57371082 to T.M.); the Royal Society (FLAIR fellowship to S.E.F.); and the University of Cape Town (T.M., J.G., S.E.F.). The authors also recognize the support of the South African Department of Science and Innovation’s Biogeochemistry Research Infrastructure Platform (BIOGRIP).
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  • 38
    Publication Date: 2022-10-12
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Struve, T., Wilson, D., Hines, S., Adkins, J., & van de Flierdt, T. A deep Tasman outflow of Pacific waters during the last glacial period. Nature Communications, 13(1), (2022): 3763, https://doi.org/10.1038/s41467-022-31116-7.
    Description: The interoceanic exchange of water masses is modulated by flow through key oceanic choke points in the Drake Passage, the Indonesian Seas, south of Africa, and south of Tasmania. Here, we use the neodymium isotope signature (εNd) of cold-water coral skeletons from intermediate depths (1460‒1689 m) to trace circulation changes south of Tasmania during the last glacial period. The key feature of our dataset is a long-term trend towards radiogenic εNd values of ~−4.6 during the Last Glacial Maximum and Heinrich Stadial 1, which are clearly distinct from contemporaneous Southern Ocean εNd of ~−7. When combined with previously published radiocarbon data from the same corals, our results indicate that a unique radiogenic and young water mass was present during this time. This scenario can be explained by a more vigorous Pacific overturning circulation that supported a deeper outflow of Pacific waters, including North Pacific Intermediate Water, through the Tasman Sea.
    Description: The authors acknowledge financial support from the Grantham Institute of Climate Change and the Environment (T.v.d.F. and T.S.), the Ministry for Science and Culture of the State of Lower Saxony (T.S.), Marie Curie Reintegration grant IRG 230828 (T.v.d.F.), Leverhulme Trust grant RPG-398 (T.v.d.F.), Natural Environment Research Council grants NE/F016751/1 (T.v.d.F.), NE/N001141/1 (T.v.d.F. and D.J.W.), and NE/T011440/1 (D.J.W.), and National Science Foundation grant OCE-1503129 (J.F.A. and S.K.V.H.). Open Access funding is enabled by the DFG open access publication fund and the Carl von Ossietzky University Oldenburg.
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  • 39
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Sil, S., Gangopadhyay, A., Gawarkiewicz, G., & Pramanik, S. Shifting seasonality of cyclones and western boundary current interactions in Bay of Bengal as observed during Amphan and Fani. Scientific Reports, 11(1), (2021): 22052 https://doi.org/10.1038/s41598-021-01607-6.
    Description: In recent years, the seasonal patterns of Tropical Cyclones (TC) in the Bay of Bengal have been shifting. While tropical depressions have been common in March–May (spring), they typically have been relatively weaker than the TCs during October–December. Here we show that the spatial pattern of recent warming trends during the last two decades in the southwestern Bay has allowed for stronger springtime pre-monsoon cyclones such as Amphan (May 2020, Super Cyclone) and Fani (April–May 2019, Extremely Severe Cyclone). The tracks of the pre-monsoon cyclones shifted westward, concurrent with an increasing rate of warming. This shift allowed both Fani and Amphan tracks to cross the northeastward warm Western Boundary Current (WBC) and associated warm anti-cyclonic eddies, while the weaker Viyaru (April 2013, Cyclonic Storm) did not interact with the WBC. A quantitative model linking the available along-track heat potential to cyclone’s intensity is developed to understand the impact of the WBC on cyclone intensification. The influence of the warming WBC and associated anti-cyclonic eddies will likely result in much stronger springtime TCs becoming relatively common in the future.
    Description: The authors gratefully acknowledge the financial and infrastructural support from the Indian Institute of Technology Bhubaneswar to carry out this research. SS acknowledges the financial assistance from Science and Engineering Research Board (SERB), Government of India (Grant No. CRG/2019/005842). All the figures are prepared using MATLAB. AG and SS appreciate the support of SERB's VAJRA Faculty Scheme (VJR/2018/000108) for the initiation of this collaborative work between SMAST and IITBBS. AG also acknowledges partial support from NSF (OCE 1851242) in completing this manuscript. GG was supported by a Grant from the Office of Naval Research as part of the Task Force Ocean initiative.
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  • 40
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Mayorova, T. D., Hammar, K., Jung, J. H., Aronova, M. A., Zhang, G., Winters, C. A., Reese, T. S., & Smith, C. L. Placozoan fiber cells: mediators of innate immunity and participants in wound healing. Scientific Reports, 11(1), (2021): 23343, https://doi.org/10.1038/s41598-021-02735-9.
    Description: Placozoa is a phylum of non-bilaterian marine animals. These small, flat organisms adhere to the substrate via their densely ciliated ventral epithelium, which mediates mucociliary locomotion and nutrient uptake. They have only six morphological cell types, including one, fiber cells, for which functional data is lacking. Fiber cells are non-epithelial cells with multiple processes. We used electron and light microscopic approaches to unravel the roles of fiber cells in Trichoplax adhaerens, a representative member of the phylum. Three-dimensional reconstructions of serial sections of Trichoplax showed that each fiber cell is in contact with several other cells. Examination of fiber cells in thin sections and observations of live dissociated fiber cells demonstrated that they phagocytose cell debris and bacteria. In situ hybridization confirmed that fiber cells express genes involved in phagocytic activity. Fiber cells also are involved in wound healing as evidenced from microsurgery experiments. Based on these observations we conclude that fiber cells are multi-purpose macrophage-like cells. Macrophage-like cells have been described in Porifera, Ctenophora, and Cnidaria and are widespread among Bilateria, but our study is the first to show that Placozoa possesses this cell type. The phylogenetic distribution of macrophage-like cells suggests that they appeared early in metazoan evolution.
    Description: Open Access funding provided by the National Institutes of Health (NIH).
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  • 41
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Brun, N. R., Salanga, M. C., Mora-Zamorano, F. X., Lamb, D. C., Goldstone, J. V., & Stegeman, J. J. Orphan cytochrome P450 20a1 CRISPR/Cas9 mutants and neurobehavioral phenotypes in zebrafish. Scientific Reports, 11(1), (2021): 23892, https://doi.org/10.1038/s41598-021-03068-3.
    Description: Orphan cytochrome P450 (CYP) enzymes are those for which biological substrates and function(s) are unknown. Cytochrome P450 20A1 (CYP20A1) is the last human orphan P450 enzyme, and orthologs occur as single genes in every vertebrate genome sequenced to date. The occurrence of high levels of CYP20A1 transcripts in human substantia nigra and hippocampus and abundant maternal transcripts in zebrafish eggs strongly suggest roles both in the brain and during early embryonic development. Patients with chromosome 2 microdeletions including CYP20A1 show hyperactivity and bouts of anxiety, among other conditions. Here, we created zebrafish cyp20a1 mutants using CRISPR/Cas9, providing vertebrate models with which to study the role of CYP20A1 in behavior and other neurodevelopmental functions. The homozygous cyp20a1 null mutants exhibited significant behavioral differences from wild-type zebrafish, both in larval and adult animals. Larval cyp20a1-/- mutants exhibited a strong increase in light-simulated movement (i.e., light–dark assay), which was interpreted as hyperactivity. Further, the larvae exhibited mild hypoactivity during the adaptation period of the optomotor assays. Adult cyp20a1 null fish showed a pronounced delay in adapting to new environments, which is consistent with an anxiety paradigm. Taken together with our earlier morpholino cyp20a1 knockdown results, the results described herein suggest that the orphan CYP20A1 has a neurophysiological role.
    Description: These studies were supported in part by the Boston University Superfund Research Program NIH 5P42ES007381 (MCS, NRB, FXM, JVG, JJS), the Woods Hole Center for Oceans and Human Health (NIH: P01ES021923 and P01ES028938; NSF: OCE-1314642 and OCE-1840381; NRB and JJS), and EBI/EMBL Medakatox NIEHS R01ES029917 (JVG). DCL was funded by a UK-US Fulbright Scholarship.
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  • 42
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Beman, J. M., Vargas, S. M., Wilson, J. M., Perez-Coronel, E., Karolewski, J. S., Vazquez, S., Yu, A., Cairo, A. E., White, M. E., Koester, I., Aluwihare, L. I., & Wankel, S. D. Substantial oxygen consumption by aerobic nitrite oxidation in oceanic oxygen minimum zones. Nature Communications, 12(1), (2021): 7043, https://doi.org/10.1038/s41467-021-27381-7.
    Description: Oceanic oxygen minimum zones (OMZs) are globally significant sites of biogeochemical cycling where microorganisms deplete dissolved oxygen (DO) to concentrations 〈20 µM. Amid intense competition for DO in these metabolically challenging environments, aerobic nitrite oxidation may consume significant amounts of DO and help maintain low DO concentrations, but this remains unquantified. Using parallel measurements of oxygen consumption rates and 15N-nitrite oxidation rates applied to both water column profiles and oxygen manipulation experiments, we show that the contribution of nitrite oxidation to overall DO consumption systematically increases as DO declines below 2 µM. Nitrite oxidation can account for all DO consumption only under DO concentrations 〈393 nM found in and below the secondary chlorophyll maximum. These patterns are consistent across sampling stations and experiments, reflecting coupling between nitrate reduction and nitrite-oxidizing Nitrospina with high oxygen affinity (based on isotopic and omic data). Collectively our results demonstrate that nitrite oxidation plays a pivotal role in the maintenance and biogeochemical dynamics of OMZs.
    Description: This work was supported by NSF CAREER Grant OCE-1555375 to J.M.B. Metagenome sequencing was supported by the UCMEXUS-CONACyT Collaborative Grants Program (joint awards to J.M.B. and José García Maldonado).
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  • 43
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Remple, K. L., Silbiger, N. J., Quinlan, Z. A., Fox, M. D., Kelly, L. W., Donahue, M. J., & Nelson, C. E. Coral reef biofilm bacterial diversity and successional trajectories are structured by reef benthic organisms and shift under chronic nutrient enrichment. Npj Biofilms and Microbiomes, 7(1), (2021): 84, https://doi.org/10.1038/s41522-021-00252-1.
    Description: Work on marine biofilms has primarily focused on host-associated habitats for their roles in larval recruitment and disease dynamics; little is known about the factors regulating the composition of reef environmental biofilms. To contrast the roles of succession, benthic communities and nutrients in structuring marine biofilms, we surveyed bacteria communities in biofilms through a six-week succession in aquaria containing macroalgae, coral, or reef sand factorially crossed with three levels of continuous nutrient enrichment. Our findings demonstrate how biofilm successional trajectories diverge from temporal dynamics of the bacterioplankton and how biofilms are structured by the surrounding benthic organisms and nutrient enrichment. We identify a suite of biofilm-associated bacteria linked with the orthogonal influences of corals, algae and nutrients and distinct from the overlying water. Our results provide a comprehensive characterization of marine biofilm successional dynamics and contextualize the impact of widespread changes in reef community composition and nutrient pollution on biofilm community structure.
    Description: This work was supported through grants from the National Science Foundation for Biological Oceanography (1923877 to C.E.N. and M.J.D., 1949033 to C.E.N. and 2118687 to L.W.K., and 1924281 to N.J.S.) and the National Fish and Wildlife Foundation (grant no. 44447 to C.E.N.). This paper is funded in part by the National Oceanic and Atmospheric Administration, Project A/AS-1, which is sponsored by the University of Hawaii Sea Grant College Program, SOEST, under Institutional Grant No. NA18OAR4170076 from NOAA Office of Sea Grant, Department of Commerce. This is CSUN marine biology contribution #365, UH Sea Grant contribution UNIHI-SEAGRANT-JC-21-06, and UH SOEST contribution 11435.
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  • 44
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in James, B. D., Kimmins, K. M., Nguyen, M.-T., Lausch, A. J., & Sone, E. D. Attachment of zebra and quagga mussel adhesive plaques to diverse substrates. Scientific Reports, 11(1), (2021): 23998, https://doi.org/10.1038/s41598-021-03227-6.
    Description: Like marine mussels, freshwater zebra and quagga mussels adhere via the byssus, a proteinaceous attachment apparatus. Attachment to various surfaces allows these invasive mussels to rapidly spread, however the adhesion mechanism is not fully understood. While marine mussel adhesion mechanics has been studied at the individual byssal-strand level, freshwater mussel adhesion has only been characterized through whole-mussel detachment, without direct interspecies comparisons on different substrates. Here, adhesive strength of individual quagga and zebra mussel byssal plaques were measured on smooth substrates with varying hydrophobicity—glass, PVC, and PDMS. With increased hydrophobicity of substrates, adhesive failures occurred more frequently, and mussel adhesion strength decreased. A new failure mode termed 'footprint failure' was identified, where failure appeared to be adhesive macroscopically, but a microscopic residue remained on the surface. Zebra mussels adhered stronger and more frequently on PDMS than quagga mussels. While their adhesion strengths were similar on PVC, there were differences in the failure mode and the plaque-substrate interface ultrastructure. Comparisons with previous marine mussel studies demonstrated that freshwater mussels adhere with comparable strength despite known differences in protein composition. An improved understanding of freshwater mussel adhesion mechanics may help explain spreading dynamics and will be important in developing effective antifouling surfaces.
    Description: This work was supported by Discovery grant (#342455) to EDS from the National Sciences and Engineering Research Council (NSERC) of Canada (RGPIN-2019-06210).
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  • 45
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Johnson, M. D., Swaminathan, S. D., Nixon, E. N., Paul, V. J., & Altieri, A. H. Differential susceptibility of reef-building corals to deoxygenation reveals remarkable hypoxia tolerance. Scientific Reports, 11(1), (2021): 23168, https://doi.org/10.1038/s41598-021-01078-9.
    Description: Ocean deoxygenation threatens the persistence of coastal ecosystems worldwide. Despite an increasing awareness that coastal deoxygenation impacts tropical habitats, there remains a paucity of empirical data on the effects of oxygen limitation on reef-building corals. To address this knowledge gap, we conducted laboratory experiments with ecologically important Caribbean corals Acropora cervicornis and Orbicella faveolata. We tested the effects of continuous exposure to conditions ranging from extreme deoxygenation to normoxia (~ 1.0 to 6.25 mg L−1 dissolved oxygen) on coral bleaching, photophysiology, and survival. Coral species demonstrated markedly different temporal resistance to deoxygenation, and within a species there were minimal genotype-specific treatment effects. Acropora cervicornis suffered tissue loss and mortality within a day of exposure to severe deoxygenation (~ 1.0 mg L−1), whereas O. faveolata remained unaffected after 11 days of continuous exposure to 1.0 mg L−1. Intermediate deoxygenation treatments (~ 2.25 mg L−1, ~ 4.25 mg L−1) elicited minimal responses in both species, indicating a low oxygen threshold for coral mortality and coral resilience to oxygen concentrations that are lethal for other marine organisms. These findings demonstrate the potential for variability in species-specific hypoxia thresholds, which has important implications for our ability to predict how coral reefs may be affected as ocean deoxygenation intensifies. With deoxygenation emerging as a critical threat to tropical habitats, there is an urgent need to incorporate deoxygenation into coral reef research, management, and action plans to facilitate better stewardship of coral reefs in an era of rapid environmental change.
    Description: This research was funded by an award from the National Oceanic and Atmospheric Administration’s National Centers for Coastal Ocean Science Competitive Research Program to AA, MJ, and VP (NA18NOS4780170) through the University of Florida. MJ was funded by postdoctoral fellow awards from the Smithsonian Institution's Marine Global Earth Observatory (MarineGEO), the Smithsonian Marine Station, and Woods Hole Oceanographic Institution. This material is based on work supported by the National Science Foundation Graduate Research Fellowship under Grant No. DGE-1842473. This is contribution 259 from the Coastal Hypoxia Research Program, 93 from the Smithsonian’s MarineGEO and Tennenbaum Marine Observatories Network, and 1167 from the Smithsonian Marine Station at Fort Pierce.
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  • 46
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Tyne, R. L., Barry, P. H., Lawson, M., Byrne, D. J., Warr, O., Xie, H., Hillegonds, D. J., Formolo, M., Summers, Z. M., Skinner, B., Eiler, J. M., & Ballentine, C. J. Rapid microbial methanogenesis during CO2 storage in hydrocarbon reservoirs. Nature, 600(7890), (2021): 670-674, https://doi.org/10.1038/s41586-021-04153-3.
    Description: Carbon capture and storage (CCS) is a key technology to mitigate the environmental impact of carbon dioxide (CO2) emissions. An understanding of the potential trapping and storage mechanisms is required to provide confidence in safe and secure CO2 geological sequestration1,2. Depleted hydrocarbon reservoirs have substantial CO2 storage potential1,3, and numerous hydrocarbon reservoirs have undergone CO2 injection as a means of enhanced oil recovery (CO2-EOR), providing an opportunity to evaluate the (bio)geochemical behaviour of injected carbon. Here we present noble gas, stable isotope, clumped isotope and gene-sequencing analyses from a CO2-EOR project in the Olla Field (Louisiana, USA). We show that microbial methanogenesis converted as much as 13–19% of the injected CO2 to methane (CH4) and up to an additional 74% of CO2 was dissolved in the groundwater. We calculate an in situ microbial methanogenesis rate from within a natural system of 73–109 millimoles of CH4 per cubic metre (standard temperature and pressure) per year for the Olla Field. Similar geochemical trends in both injected and natural CO2 fields suggest that microbial methanogenesis may be an important subsurface sink of CO2 globally. For CO2 sequestration sites within the environmental window for microbial methanogenesis, conversion to CH4 should be considered in site selection.
    Description: R.L.T. was supported by a Natural Environment Research Council studentship (grant reference NE/L002612/1). C.J.B. and P.H.B. acknowledge A. Regberg and B. Meurer for their support of the project and help with sample collection. C.J.B. was part supported by an Earth4D CIFAR fellowship. P.H.B. was supported by NSF awards 1923915 and 2015789. O.W. was supported by Natural Sciences and Engineering Research Council of Canada Discovery and Accelerator grants awarded to the Sherwood Lollar research group and acknowledges B. Sherwood Lollar’s support for the project. Z.M.S. acknowledges J. Biddle and G. Christman for their help in generating the microbial data.
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  • 47
    Publication Date: 2022-08-03
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Schmidbaur, H., Kawaguchi, A., Clarence, T., Fu, X., Hoang, O. P., Zimmermann, B., Ritschard, E. A., Weissenbacher, A., Foster, J. S., Nyholm, S., Bates, P. A., Albertin, C. B., Tanaka, E., & Simakov, O. Emergence of novel cephalopod gene regulation and expression through large-scale genome reorganization. Nature Communications, 13(1), (2022): 2172, https://doi.org/10.1038/s41467-022-29694-7.
    Description: Coleoid cephalopods (squid, cuttlefish, octopus) have the largest nervous system among invertebrates that together with many lineage-specific morphological traits enables complex behaviors. The genomic basis underlying these innovations remains unknown. Using comparative and functional genomics in the model squid Euprymna scolopes, we reveal the unique genomic, topological, and regulatory organization of cephalopod genomes. We show that coleoid cephalopod genomes have been extensively restructured compared to other animals, leading to the emergence of hundreds of tightly linked and evolutionary unique gene clusters (microsyntenies). Such novel microsyntenies correspond to topological compartments with a distinct regulatory structure and contribute to complex expression patterns. In particular, we identify a set of microsyntenies associated with cephalopod innovations (MACIs) broadly enriched in cephalopod nervous system expression. We posit that the emergence of MACIs was instrumental to cephalopod nervous system evolution and propose that microsyntenic profiling will be central to understanding cephalopod innovations.
    Description: H.S., O.P.H., E.R., and O.S. were supported by the Austrian Science Fund (FWF) grant P30686-B29. O.S. was supported by Whitman Center Early Career Fellowship (Frank R. Lillie Quasi-Endowment Fund, L. & A. Colwin Summer Research Fellowship, Bell Research Award in Tissue Engineering). H.S. was supported by the short-term grant abroad (KWA) of the University of Vienna. H.S. and O.S. were supported by the University of Chicago/Vienna Strategic Partnership Programme Mobility Grant. A.K. was supported by the JSPS Postdoctoral Fellowship for Overseas Researchers program from Japan. C.B.A. was supported by the Hibbitt Early Career Fellowship. Eggs and paralarvae of E. scolopes were generated in part by support by the NASA Space Biology 80NSSC18K1465 awarded to J.S.F. S.V.N. was supported by the National Science Foundation IOS-1557914. This work was supported by the Francis Crick Institute, which receives its core funding from Cancer Research UK (FC0001003), the UK Medical Research Council (FC001003), and the Wellcome Trust (FC001003).
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  • 48
    Publication Date: 2022-08-04
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Caudron, C., Vandemeulebrouck, J., & Sohn, R. A. Turbulence-induced bubble nucleation in hydrothermal fluids beneath Yellowstone Lake. Communications Earth & Environment, 3(1), (2022): 103, https://doi.org/10.1038/s43247-022-00417-6.
    Description: Volcanic systems generate large amounts of gas, and understanding gas fluxes is a fundamental aspect of volcanology and hazard mitigation. Volcanic gases can be challenging to measure, but acoustic methods hold promise in underwater environments because gas bubbles are powerful sound sources. We deployed an acoustic system to study the nature of gas discharge at a large (~30 MW) thermal field on the floor of Yellowstone Lake, which has experienced numerous hydrothermal explosions since the last glaciation (~13.4 ka). We find that small (〈10 Pa) turbulent flow instabilities trigger the nucleation of CO2 bubbles in the saturated fluids. The observation of CO2 bubbles nucleating in hydrothermal fluids due to small pressure perturbations informs our understanding of hydrothermal explosions in Yellowstone Lake, and demonstrates that acoustic data in underwater environments can provide insight into the stability of gas-rich systems, as well as gas fluxes.
    Description: This research was supported by the National Science Foundation grant EAR-1516361 to R.A.S. All work in Yellowstone National Park was completed under an authorized research permit (YELL-2018-SCI-7018). We also acknowledge the IRGA 2021 Volquan project (funded by Université Grenoble Alpes) and Thomas Jefferson Fund Face Foundation (project TJF20_009 ‘Quantifying underwater volcano degassing using novel seismo-acoustic approaches’).
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  • 49
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    In:  EPIC3INTERACT Webinar on Data Repositories, Online, 2022-05-12Bremerhaven, PANGAEA
    Publication Date: 2022-10-04
    Repository Name: EPIC Alfred Wegener Institut
    Type: Conference , notRev
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  • 50
    Publication Date: 2022-08-16
    Description: Most volcanoes on the Earth rise from the bottom of seas and oceans. Most of them do not reach the surface of sea and remain hidden to all conventional observations from surface and space. Only some of them rise above the sea level, forming islands and passing from submarine to subaerial volcanism. Volcanic islands develop in virtually all the geodynamic contexts on Earth, from mid-ocean ridges (Iceland), to intraplate (Hawaii), to volcanic arcs (Aeolian Islands). All the liquid-descent evolutive degrees of magma are finally represented, from primitive compositions up to strongly evolved rhyolite, trachyte and phonolite lavas. So, the eruptive styles of these volcanoes range consequently from mild effusions to plinian eruptions.
    Description: Published
    Description: 954902
    Description: 2V. Struttura e sistema di alimentazione dei vulcani
    Description: JCR Journal
    Keywords: volcanoes ; seafloor ; 04.08. Volcanology ; 04.04. Geology
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  • 51
    Publication Date: 2022-08-16
    Description: Italy is the land of iconic volcanoes, whose activity has been witnessed, described and portrayed for centuries. This legacy has greatly contributed to shaping the public perception of volcanoes and their impact, well beyond the national borders. Stories about famous eruptions overlap and nowadays easily mix up with the impressive footage that is readily available from ongoing eruptions worldwide. As a result, the public discourse may flatten the wide spectrum of possible phenomena into an oversimplified sketch of volcanic eruptions and their impact, where all events seem equally probable and look alike. Actual volcanoes differ in size, eruption magnitude, state of activity, eruptive style, geographical position, and each is located within a specific social and cultural context. All these elements combine in defining the consequences of volcanic activity as well as in determining the severity of the damage and the size of the impacted area. How can we convey such a complexity to the general public? Can social media contribute to raise awareness and build a more resilient society? An effective hazard communication should propose a comprehensible yet realistic description of volcanic settings and provide adequate tools to recognize and understand the specific features of each phenomenon and volcanic area. As we write, two Italian volcanoes display persistent eruptive activity, while other two are going through unrest phases that started in 2012, at Campi Flegrei, and in late summer of 2021, at Vulcano Island. Other active volcanoes (Vesuvius, Ischia, Colli Albani, Lipari, and Pantelleria) have been dormant for tens, hundreds, or thousands of years. Communication in these different contexts also require different approaches that take into account the specific needs of local communities. Social media may provide a unique opportunity to quickly share relevant news and information. Yet, this type of communication has its challenges and volcano observatories can rarely rely on expert social media managers. Sharing experiences and lessons learned is a key to ensure the growth of the volcanological community and improve its ability to connect and engage local residents. Here we discuss the online communication strategies implemented by the Istituto Nazionale di Geofisica e Vulcanologia (INGV) since 2018 to inform Internet and social media users about volcanoes, volcanology, and ongoing volcanic activity, both in Italy and abroad. We describe the internal procedures that we developed and practiced and the experience gathered so far, during both quiet periods and a few volcanic crises. Our experience confirms previous indications about the importance of a steady online presence and suggests that public interest is not always easily predictable.
    Description: Published
    Description: 926155
    Description: 2TM. Divulgazione Scientifica
    Description: 3TM. Comunicazione
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 52
    Publication Date: 2022-08-15
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Sievert, S. M., Buehring, S., Gulmann, L. K., Hinrichs, K.-U., Ristova, P. P., & Gomez-Saez, G. Fluid flow stimulates chemoautotrophy in hydrothermally influenced coastal sediments. Communications Earth & Environment, 3(1), (2022): 96, https://doi.org/10.1038/s43247-022-00426-5.
    Description: Hydrothermalism in coastal sediments strongly impacts biogeochemical processes and supports chemoautotrophy. Yet, the effect of fluid flow on microbial community composition and rates of chemoautotrophic production is unknown because rate measurements under natural conditions are difficult, impeding an assessment of the importance of these systems. Here, in situ incubations controlling fluid flow along a transect of three geochemically distinct locations at a shallow-water hydrothermal system off Milos (Greece) show that Campylobacteria dominated chemoautotrophy in the presence of fluid flow. Based on injected 13C-labelled dissolved inorganic carbon and its incorporation into fatty acids, we constrained carbon fixation to be as high as 12 µmol C cm−3 d−1, corresponding to areal rates up to 10-times higher than previously reported for coastal sediments, and showed the importance of fluid flow for supplying the necessary substrates to support chemoautotrophy. Without flow, rates were substantially lower and microbial community composition markedly shifted. Our results highlight the importance of fluid flow in shaping the composition and activity of microbial communities of shallow-water hydrothermal vents, identifying them as hotspots of microbial productivity.
    Description: Open Access funding enabled and organized by Projekt DEAL.
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  • 53
    Publication Date: 2022-08-15
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Sufke, F., Gutjahr, M., Keigwin, L. D., Reilly, B., Giosan, L., & Lippold, J. Arctic drainage of Laurentide Ice Sheet meltwater throughout the past 14,700 years. Communications Earth & Environment, 3(1), (2022): 98, https://doi.org/10.1038/s43247-022-00428-3.
    Description: During the last deglaciation substantial volumes of meltwater from the decaying Laurentide Ice Sheet were supplied to the Arctic, Gulf of Mexico and North Atlantic along different drainage routes, sometimes as catastrophic flood events. These events are suggested to have impacted global climate, for example initiating the Younger Dryas cold period. Here we analyze the authigenic Pb isotopic composition of sediments in front of the Arctic Mackenzie Delta, a sensitive tracer for elevated freshwater runoff of the retreating Laurentide Ice Sheet. Our data reveal continuous meltwater supply to the Arctic along the Mackenzie River since the onset of the Bølling–Allerød. The strongest Lake Agassiz outflow event is observed at the end of the Bølling–Allerød close to the onset of the Younger Dryas. In context of deglacial North American runoff records from the southern and eastern outlets, our findings provide a detailed reconstruction of the deglacial drainage chronology of the disintegrating Laurentide Ice Sheet.
    Description: Open Access funding enabled and organized by Projekt DEAL.
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  • 54
    Publication Date: 2022-08-19
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Albertin, C. B., Medina-Ruiz, S., Mitros, T., Schmidbaur, H., Sanchez, G., Wang, Z. Y., Grimwood, J., Rosenthal, J. J. C., Ragsdale, C. W., Simakov, O., & Rokhsar, D. S. Genome and transcriptome mechanisms driving cephalopod evolution. Nature Communications, 13(1), (2022): 2427, https://doi.org/10.1038/s41467-022-29748-w.
    Description: Cephalopods are known for their large nervous systems, complex behaviors and morphological innovations. To investigate the genomic underpinnings of these features, we assembled the chromosomes of the Boston market squid, Doryteuthis (Loligo) pealeii, and the California two-spot octopus, Octopus bimaculoides, and compared them with those of the Hawaiian bobtail squid, Euprymna scolopes. The genomes of the soft-bodied (coleoid) cephalopods are highly rearranged relative to other extant molluscs, indicating an intense, early burst of genome restructuring. The coleoid genomes feature multi-megabase, tandem arrays of genes associated with brain development and cephalopod-specific innovations. We find that a known coleoid hallmark, extensive A-to-I mRNA editing, displays two fundamentally distinct patterns: one exclusive to the nervous system and concentrated in genic sequences, the other widespread and directed toward repetitive elements. We conclude that coleoid novelty is mediated in part by substantial genome reorganization, gene family expansion, and tissue-dependent mRNA editing.
    Description: We thank the Marine Resources Center and the Cephalopod program at the Marine Biological Laboratory for supplying D. pealeii, R. Hanlon for the image in Fig. 1a, R. Hanlon and S. Senft for help with tissue dissection, Dr. Chuck Winkler for supplying O. bimaculoides, B. Burford and W. Gilly for assistance with D. opalescens collection, and the Vienna Zoo (Tiergarten Schönbrunn), particularly R. Halbauer, A. Weissenbacher, and the aquarist team for E. scolopes husbandry. Computation was done using the Life Science Cluster at the University of Vienna. This project began with generous funding from the Grass Foundation, administered by the MBL through J.J.R. It was also supported by Austrian Science fund FWF (P30686-B29) to H.S. and O.S., the Whitman Center Early Career Fellowship to O.S., the Okinawa Institute of Science and Technology Molecular Genetics Unit, Chan-Zuckerberg BioHub, and the Marthella Foskett Brown Chair in Computational Biology to D.S.R, NSF grant (IOS-1354898) to C.W.R, and the Hibbitt Early Career Fellowship to C.B.A. Sequencing at the University of Chicago Functional Genomics Facility was partially supported by the NIH (5UL1TR002389-02 and UL1 TR000430).
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  • 55
    Publication Date: 2022-08-19
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Yuan, D., Yin, X., Li, X., Corvianawatie, C., Wang, Z., Li, Y., Yang, Y., Hu, X., Wang, J., Tan, S., Surinati, D., Purwandana, A., Wardana, A., Ismail, M., Budiman, A., Bayhaqi, A., Avianto, P., Santoso, P., Kusmanto, E., Dirhamsyah, Arifin, Z., & Pratt, L. A Maluku Sea intermediate western boundary current connecting Pacific Ocean circulation to the Indonesian Throughflow. Nature Communications, 13(1), (2022): 2093, https://doi.org/10.1038/s41467-022-29617-6.
    Description: The Indonesian Throughflow plays an important role in the global ocean circulation and climate. Existing studies of the Indonesian Throughflow have focused on the Makassar Strait and the exit straits, where the upper thermocline currents carry North Pacific waters to the Indian Ocean. Here we show, using mooring observations, that a previous unknown intermediate western boundary current (with the core at ~1000 m depth) exists in the Maluku Sea, which transports intermediate waters (primarily the Antarctic Intermediate Water) from the Pacific into the Seram-Banda Seas through the Lifamatola Passage above the bottom overflow. Our results suggest the importance of the western boundary current in global ocean intermediate circulation and overturn. We anticipate that our study is the beginning of more extensive investigations of the intermediate circulation of the Indo-Pacific ocean in global overturn, which shall improve our understanding of ocean heat and CO2 storages significantly.
    Description: This study is supported by NSFC (D.Y., Z.W., Y.L., Y.Y., S.T., J.W., and X.L.: 41720104008; D.Y., J.W., Y.L., X.L., Y.Y., S.T., X.H., and X.Y.: 91858204), the National Key Research and Development Program of China (D.Y. and X.L.: 2020YFA0608800), CAS (D.Y., Z.W., J.W., and Y.L.: XDB42000000), projects. Affiliations 1 and 2 share the first position. D.Y. is supported by QMSNL (2018SDKJ0104-02), and Shandong Provincial (U1606402) and the “Kunpeng Outstanding Scholar Program” of the FIO/NMR of China, J.W. supported by NSFC (41776011), Z.W. by NSFC (41876025).
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  • 56
    Publication Date: 2022-08-22
    Description: Open conduit volcanoes like Stromboli can display elusive changes in activity before major eruptive events. Starting on December 2020, Stromboli volcano displayed an increasing eruptive activity, that on 19 May 2021 led to a crater-rim collapse, with pyroclastic density currents (PDCs) that spread along the barren NWflank, entered the sea and ran across it for more than 1 km. This episode was followed by lava flow output from the crater rim lasting a few hours, followed by another phase of lava flow in June 2021. These episodes are potentially very dangerous on island volcanoes since a landslide of hot material that turns into a pyroclastic density current and spreads on the sea surface can threaten mariners and coastal communities, as happened at Stromboli on 3 July and 28 August 2019. In addition, on entering the sea, if their volume is large enough, landslides may trigger tsunamis, as occurred at Stromboli on 30 December 2002. In this paper, we present an integration of multidisciplinary monitoring data, including thermal and visible camera images, ground deformation data gathered from GNSS, tilt, strainmeter and GBInSAR, seismicity, SO2 plume and CO2 ground fluxes and thermal data from the ground and satellite imagery, together with petrological analyses of the erupted products compared with samples from previous similar events. We aim at characterizing the preparatory phase of the volcano that began on December 2020 and led to the May–June 2021 eruptive activity, distinguishing this small intrusion of magma from the much greater 2019 eruptive phase, which was fed by gas-rich magma responsible for the paroxysmal explosive and effusive phases of July–August 2019. These complex eruption scenarios have important implications for hazard assessment and the lessons learned at Stromboli volcano may prove useful for other open conduit active basaltic volcanoes.
    Description: This research was funded by the Project FIRSTForecastIng eRuptive activity at Stromboli volcano: Timing, eruptive style, size, intensity, and duration, INGV-Progetto Strategico Dipartimento Vulcani 2019 (Delibera n. 144/2020). This research was funded by the “Presidenza del Consiglio dei Ministri–Dipartimento della Protezione Civile,” through the UniFi-DPC 2019-2021 agreement (Scientific Responsibility: N.C.).
    Description: Published
    Description: 899635
    Description: 5V. Processi eruttivi e post-eruttivi
    Description: JCR Journal
    Keywords: Stromboli volcano ; multi-disciplinary monitoring data ; crater-rim collapse ; pyroclastic density current ; hazard assessment ; 04.08. Volcanology
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  • 57
    Publication Date: 2022-06-29
    Description: The possibility that Arctic sea ice loss weakens mid-latitude westerlies, promoting more severe cold winters, has sparked more than a decade of scientific debate, with apparent support from observations but inconclusive modelling evidence. Here we show that sixteen models contributing to the Polar Amplification Model Intercomparison Project simulate a weakening of mid-latitude westerlies in response to projected Arctic sea ice loss. We develop an emergent constraint based on eddy feedback, which is 1.2 to 3 times too weak in the models, suggesting that the real-world weakening lies towards the higher end of the model simulations. Still, the modelled response to Arctic sea ice loss is weak: the North Atlantic Oscillation response is similar in magnitude and offsets the projected response to increased greenhouse gases, but would only account for around 10% of variations in individual years. We further find that relationships between Arctic sea ice and atmospheric circulation have weakened recently in observations and are no longer inconsistent with those in models.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , NonPeerReviewed , info:eu-repo/semantics/article
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  • 58
    Publication Date: 2022-06-27
    Description: Studying a large number of volcanic eruptions is a way to decipher general characteristics related to volcano dynamics but also on external forcing influencing it, such as solid Earth and ocean tides. Many studies have tackled this tidal influence on the onset of volcanic eruptions and more generally, on volcanic activity. However, the interplay between this quasi-permanent forcing and volcanic systems is still poorly understood. With the present study, we propose to consider a global viewpoint to address this interaction. We analyzed the number of monthly volcanic eruptions and the global mean sea level between 1880 and 2009 using the Singular Spectrum Analysis time-series analysis technique to evaluate the existence of common periodicities. We found multi-decadal components of similar periodicities present in both time-series which we link to those already recognized in the polar motion. Its multi-decadal variations result in a mass reorganization in the oceans whose associated stress changes may impact processes generating volcanic eruptions worldwide. Our results show the influence of global processes on volcanic activity and open many questions to further investigate these multi-scale interactions.
    Description: Published
    Description: 845511
    Description: 4V. Processi pre-eruttivi
    Description: JCR Journal
    Keywords: external forcing ; volcanic activity ; global mean sea level ; solid Earth and ocean tides ; eruption triggering ; interaction external/internal processes ; singular spectrum analysis ; polar motion ; 04.08. Volcanology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 59
    Publication Date: 2022-06-17
    Description: Sea wave monitoring is key in many applications in oceanography such as the validation of weather and wave models. Conventional in situ solutions are based on moored buoys whose measurements are often recognized as a standard. However, being exposed to a harsh environment, they are not reliable, need frequent maintenance, and the datasets feature many gaps. To overcome the previous limitations, we propose a system including a buoy, a micro-seismic measuring station, and a machine learning algorithm. The working principle is based on measuring the micro-seismic signals generated by the sea waves. Thus, the machine learning algorithm will be trained to reconstruct the missing buoy data from the micro-seismic data. As the micro-seismic station can be installed indoor, it assures high reliability while the machine learning algorithm provides accurate reconstruction of the missing buoy data. In this work, we present the methods to process the data, develop and train the machine learning algorithm, and assess the reconstruction accuracy. As a case of study, we used experimental data collected in 2014 from the Northern Tyrrhenian Sea demonstrating that the data reconstruction can be done both for significant wave height and wave period. The proposed approach was inspired from Data Science, whose methods were the foundation for the new solutions presented in this work. For example, estimating the period of the sea waves, often not discussed in previous works, was relatively simple with machine learning. In conclusion, the experimental results demonstrated that the new system can overcome the reliability issues of the buoy keeping the same accuracy.
    Description: Assist in Gravitation and Instrumentation srl Istituto Nazionale di Geofisica e Vulcanologia
    Description: Published
    Description: 798167
    Description: 4A. Oceanografia e clima
    Description: JCR Journal
    Keywords: sea swell ; machine learning ; ocean waves ; micro-seismic data ; sea state ; sea wave period ; buoy ; Marine Science ; Oceanography
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  • 60
    Publication Date: 2022-07-08
    Description: Volcanic and Seismic source Modeling (VSM) is an open-source Python tool to model ground deformation. VSM allows the user to choose one or more deformation sources of various shapes as a forward model among sphere, spheroid, ellipsoid, rectangular dislocation, and sill. It supports multiple datasets from most satellite and terrestrial geodetic techniques: Interferometric SAR, GNSS, leveling, Electronic Distance Measurements, tiltmeters, and strainmeters. Two sampling algorithms are available: one is a global optimization algorithm based on the Voronoi cells and yields the best-fitting solution and the second follows a probabilistic approach to parameters estimation based on the Bayes theorem and the Markov chain Monte Carlo method. VSM can be executed as Python script, in Jupyter Notebook environments, or by its Graphical User Interface. Its broad applications range from high-level research to teaching, from single studies to near real-time hazard estimates. Potential users range from early-career scientists to experts. It is freely available on GitHub (https://github.com/EliTras/VSM) and is accompanied by step-by-step documentation in Jupyter Notebooks. This study presents the functionalities of VSM and test cases to describe its use and comparisons among possible settings.
    Description: This work was jointly supported by the “Research Lifecycle Management technologies for Earth Science Communities and Copernicus users in EOSC” Reliance project funded by the European Commission’s H2020 2021-2022 (Grant Agreement no. 101017501); Pianeta Dinamico—Working Earth project (2020-2030) funded by the Italian Ministry of University and Research (Decree no. 1118 04/12/2019); and “Linking Surface Observables to sub-Volcanic Plumbing-System: A Multidisciplinary Approach for Eruption Forecasting at Campi Flegrei Caldera (Italy)” LOVE-CF (2020-2023) project funded by INGV (Internal Register no. 1865 17/07/2020).
    Description: Published
    Description: 917222
    Description: 4V. Processi pre-eruttivi
    Description: JCR Journal
    Keywords: analytical model ; geodetic data ; natural hazards ; open science ; inverse theory ; InSAR ; 04.08. Volcanology ; 04.03. Geodesy ; 04.06. Seismology
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  • 61
    Publication Date: 2022-09-09
    Description: Volcanoes are complex systems that evolve in space and time as a result of their internal dynamics. These internal dynamics span both long and short time scales, reflecting the different steps for the magma to form, accumulate and evolve before being eventually erupted. All of these stages may be influenced by processes external to the volcano, although most of the evidence that has been gathered on this has considered influences on the magmatic fluids stored at crustal depths, or emerging at surface. External forcing acts either through the stress or gravitational fields that may accelerate or slow down the transfer of magma towards the surface. Changing tectonic stresses and Earth tides may induce changes in the dynamical state of volcanoes, ultimately providing the triggers that may lead to eruption. Water, which is ubiquitous on Earth, and present in its different fluid and solid envelopes, appears to play a key role, acting on volcanic systems from pore- to global-scale in various ways (hydrological modulation, ice cap loading), due to its physico-chemical properties. This Research Topic brings together contributions, which provide new constraints and lines of evidence on the nature and variety of external processes influencing activity at quiet, restless and erupting volcanoes.
    Description: Published
    Description: 999214
    Description: 4V. Processi pre-eruttivi
    Description: JCR Journal
    Keywords: external forcing ; modulation of volcanic processes ; eruption triggering ; periodic variations and behaviors ; short and long time scales ; 04.08. Volcanology
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  • 62
    Publication Date: 2022-09-23
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Pattanayak, R., Underwood, R., Crowley, M. R., Crossman, D. K., Morgan, J. R., & Yacoubian, T. A. Deletion in chromosome 6 spanning alpha-synuclein and multimerin1 loci in the Rab27a/b double knockout mouse. Scientific Reports, 12(1), (2022): 9837, https://doi.org/10.1038/s41598-022-13557-8.
    Description: We report an incidental 358.5 kb deletion spanning the region encoding for alpha-synuclein (αsyn) and multimerin1 (Mmrn1) in the Rab27a/Rab27b double knockout (DKO) mouse line previously developed by Tolmachova and colleagues in 2007. Western blot and RT-PCR studies revealed lack of αsyn expression at either the mRNA or protein level in Rab27a/b DKO mice. PCR of genomic DNA from Rab27a/b DKO mice demonstrated at least partial deletion of the Snca locus using primers targeted to exon 4 and exon 6. Most genes located in proximity to the Snca locus, including Atoh1, Atoh2, Gm5570, Gm4410, Gm43894, and Grid2, were shown not to be deleted by PCR except for Mmrn1. Using whole genomic sequencing, the complete deletion was mapped to chromosome 6 (60,678,870–61,037,354), a slightly smaller deletion region than that previously reported in the C57BL/6J substrain maintained by Envigo. Electron microscopy of cortex from these mice demonstrates abnormally enlarged synaptic terminals with reduced synaptic vesicle density, suggesting potential interplay between Rab27 isoforms and αsyn, which are all highly expressed at the synaptic terminal. Given this deletion involving several genes, the Rab27a/b DKO mouse line should be used with caution or with appropriate back-crossing to other C57BL/6J mouse substrain lines without this deletion.
    Description: This study was supported by NIH [R56NS115767 (TAY), RF1NS115767-01A1 (TAY), P50NS108675 (TAY), and NINDS/NIA RF1NS078165 (JRM)].
    Repository Name: Woods Hole Open Access Server
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  • 63
    Publication Date: 2022-07-20
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Ballou, L., Brankovits, D., Chavez-Solis, E. M., Diaz, J. M. C., Gonzalez, B. C., Rohret, S., Salinas, A., Liu, A., Simoes, N., Alvarez, F., Miglietta, M. P., Iliffe, T. M., & Borda, E. An integrative re-evaluation of Typhlatya shrimp within the karst aquifer of the Yucatan Peninsula, Mexico. Scientific Reports, 12(1), (2022): 5302, https://doi.org/10.1038/s41598-022-08779-9.
    Description: The Yucatán Peninsula, Mexico is a carbonate platform well-known for extensive karst networks of densely stratified aquifer ecosystems. This aquifer supports diverse anchialine fauna, including species of the globally distributed anchialine shrimp genus Typhlatya (Atyidae). Four species (T. campecheae, T. pearsei, T. dzilamensis and T. mitchelli) are endemic to the Peninsula, of which three are federally listed in Mexico. This first integrative evaluation (i.e., molecular, morphological, broad geographic and type locality sampling, and environmental data) of Yucatán Typhlatya reveals considerable species identity conflict in prior phylogenetic assessments, broad species ranges, syntopy within cave systems and five genetic lineages (of which two are new to science). Despite sampling from the type locality of endangered T. campecheae, specimens (and molecular data) were indistinguishable from vulnerable T. pearsei. Ancestral/divergence reconstructions support convergent evolution of a low-salinity ancestor for a post-Paleogene arc Yucatán + Cuba Typhlatya clade within the anchialine Atyidae clade. A secondary adaptation for the coastal-restricted euryhaline (2–37 psu), Typhlatya dzilamensis (unknown conservation status) was identified, while remaining species lineages were low-salinity (〈 5 psu) adapted and found within the meteoric lens of inland and coastal caves. This study demonstrates the need for integrative/interdisciplinary approaches when conducting biodiversity assessments in complex and poorly studied aquifers.
    Description: Financial support for this study was provided by Texas A&M-CONACYT (TI, FA), TI, FA), PAPIIT IN208519 (DGAPA-UNAM) (FA), CONACYT Ciencia Básica A1-S-32846 (FA), Texas A&M University San Antonio (TAMUSA) Start-up Funds (EB), TAMUSA Research Council Grant (EB), TAMUSA Summer Faculty Grant and Fellowship (EB). NSF-REU/OCE: 1560242 supported AL and EB, and TAMU-Louis Stokes Alliance for Minority Participation (HRD: 1612776) supported SR, LS. This work was also supported by the NSF Graduate Research Fellowship Program (M1703014) and the Cave Conservancy Foundation (LB). Typhlatya sampling was sanctioned under collection permits SEMARNAT/SGPA/DGVS 05263/14, 004471/18, 05996/19.
    Repository Name: Woods Hole Open Access Server
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  • 64
    Publication Date: 2022-07-21
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Kim, S., Park, J.-H., & Kug, J.-S. Tropical origins of the record-breaking 2020 summer rainfall extremes in East Asia. Scientific Reports, 12(1), (2022): 5366, https://doi.org/10.1038/s41598-022-09297-4.
    Description: The East Asian countries have experienced heavy rainfalls in boreal summer 2020. Here, we investigate the dynamical processes driving the rainfall extremes in East Asia during July and August. The Indian Ocean basin warming in June can be responsible for the anticyclonic anomalies in the western North Pacific (WNP), which modulate the zonally-elongated rainfalls in East Asia during July through an atmospheric Rossby wave train. In August, the East Asian rainfall increase is also related to the anticyclonic anomalies in the subtropical WNP, although it is located further north. The north tropical Atlantic warming in June partly contributes to the subtropical WNP rainfall decrease in August through a subtropical teleconnection. Then the subtropical WNP rainfall decrease drives the local anticyclonic anomalies that cause the rainfall increase in East Asia during August. The tropical Indian Ocean anomalously warmed in June and the subtropical WNP rainfall decreased in August 2020, which played a role in modulating the WNP anticyclonic anomalies. Therefore, the record-breaking rainfall extremes in East Asia that occurred during summer 2020 can be explained by the teleconnections associated with the tropical origins among the Indian, Pacific, and Atlantic Oceans and their interbasin interactions.
    Description: This work is supported by the National Research Foundation of Korea (NRF-2018R1A5A1024958 & NRF-2021M3I6A1086808).
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  • 65
    Publication Date: 2022-07-21
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Kellogg, R., Moosburner, M., Cohen, N., Hawco, N., McIlvin, M., Moran, D., DiTullio, G., Subhas, A., Allen, A., & Saito, M. Adaptive responses of marine diatoms to zinc scarcity and ecological implications. Nature Communications, 13(1), (2022): 1995, https://doi.org/10.1038/s41467-022-29603-y.
    Description: Scarce dissolved surface ocean concentrations of the essential algal micronutrient zinc suggest that Zn may influence the growth of phytoplankton such as diatoms, which are major contributors to marine primary productivity. However, the specific mechanisms by which diatoms acclimate to Zn deficiency are poorly understood. Using global proteomic analysis, we identified two proteins (ZCRP-A/B, Zn/Co Responsive Protein A/B) among four diatom species that became abundant under Zn/Co limitation. Characterization using reverse genetic techniques and homology data suggests putative Zn/Co chaperone and membrane-bound transport complex component roles for ZCRP-A (a COG0523 domain protein) and ZCRP-B, respectively. Metaproteomic detection of ZCRPs along a Pacific Ocean transect revealed increased abundances at the surface (〈200 m) where dZn and dCo were scarcest, implying Zn nutritional stress in marine algae is more prevalent than previously recognized. These results demonstrate multiple adaptive responses to Zn scarcity in marine diatoms that are deployed in low Zn regions of the Pacific Ocean.
    Description: This work was funded by the National Science Foundation (OCE-1736599 and OCE-1657766), NIH (R01GM135709), Gordon and Betty Moore Foundation (GBMF3782) to M.A.S., and Simons Foundation award 544236 to N.R.C. This work was further supported by the National Science Foundation (NSF-OCE-1756884 and NSF-MCB-1818390), United States Department of Energy (DE-SC0018344), and Gordon and Betty Moore Foundation grants GBMF3828 and GBMF5006 to A.E.A.
    Repository Name: Woods Hole Open Access Server
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  • 66
    Publication Date: 2022-07-15
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Castellan, G., Angeletti, L., Montagna, P., & Taviani, M. Drawing the borders of the mesophotic zone of the Mediterranean Sea using satellite data. Scientific Reports, 12(1), (2022): 5585, https://doi.org/10.1038/s41598-022-09413-4.
    Description: The 30–150 m bathymetric range is commonly adopted in the literature to constrain the mesophotic zone. However, such depth interval varies depending on sunlight penetration, which is primarily a function of solar radiation incidence and water clarity. This is especially obvious in the Mediterranean Sea with its peculiar biophysical properties. Integrating information on light regime in the estimation of the bathymetric range of the mesophotic zone would provide a more robust definition, orienting conservation actions targeting its ecosystems. We present a first assessment of the spatial and vertical extension of the mesophotic zone in the Mediterranean Sea based upon light penetration, comparing our prediction with literature data. Our study also represents a baseline to monitor future variations in the bathymetric interval associated with the mesophotic zone in the Mediterranean Sea in relation to global changes.
    Description: This is ISMAR-CNR Bologna scientific contribution n. 2061. This work was supported by the “Convenzione MATTMCNR per i Programmi di Monitoraggio per la Direttiva sulla Strategia Marina (MSFD, Art. 11, Dir. 2008/56/CE)”, the H2020 Project RELIANCE (Grant agreement no: 101017501), the DG Environment programme IDEM (Grant agreement no. 11.0661/2017/750680/SUB/EN V.C2) and MIUR-PRIN 2017 GLIDE 2017FREXZY. This contribution is supported by Ph.D. program in Cultural and Natural Heritage of the University of Bologna (GC).
    Repository Name: Woods Hole Open Access Server
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  • 67
    Publication Date: 2022-07-15
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Millstein, J. D., Minchew, B. M., & Pegler, S. S. Ice viscosity is more sensitive to stress than commonly assumed. Communications Earth & Environment, 3(1), (2022): 57, https://doi.org/10.1038/s43247-022-00385-x.
    Description: Accurate representation of the viscous flow of ice is fundamental to understanding glacier dynamics and projecting sea-level rise. Ice viscosity is often described by a simple but largely untested and uncalibrated constitutive relation, Glen’s Flow Law, wherein the rate of deformation is proportional to stress raised to the power n. The value n = 3 is commonly prescribed in ice-flow models, though observations and experiments support a range of values across stresses and temperatures found on Earth. Here, we leverage recent remotely-sensed observations of Antarctic ice shelves to show that Glen’s Flow Law approximates the viscous flow of ice with n = 4.1 ± 0.4 in fast-flowing areas. The viscosity and flow rate of ice are therefore more sensitive to changes in stress than most ice-flow models allow. By calibrating the governing equation of ice deformation, our result is a pathway towards improving projections of future glacier change.
    Description: .D.M. was partially funded through an NSF Graduate Research Fellowship. J.D.M. and B.M.M. where partially funded through NSF-NERC award 1853918. B.M.M. received additional funding through NSF-NERC award 1739031.
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  • 68
    Publication Date: 2022-07-15
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Zhou, Y.-L., Mara, P., Cui, G.-J., Edgcomb, V., & Wang, Y. Microbiomes in the Challenger Deep slope and bottom-axis sediments. Nature Communications, 13(1), (2022): 1515, https://doi.org/10.1038/s41467-022-29144-4.
    Description: Hadal trenches are the deepest and most remote regions of the ocean. The 11-kilometer deep Challenger Deep is the least explored due to the technical challenges of sampling hadal depths. It receives organic matter and heavy metals from the overlying water column that accumulate differently across its V-shaped topography. Here, we collected sediments across the slope and bottom-axis of the Challenger Deep that enable insights into its in situ microbial communities. Analyses of 586 metagenome-assembled genomes retrieved from 37 metagenomes show distinct diversity and metabolic capacities between bottom-axis and slope sites. 26% of prokaryotic 16S rDNA reads in metagenomes were novel, with novelty increasing with water and sediment depths. These predominantly heterotrophic microbes can recycle macromolecules and utilize simple and complex hydrocarbons as carbon sources. Metagenome and metatranscriptome data support reduction and biotransformation of arsenate for energy gain in sediments that present a two-fold greater accumulation of arsenic compared to non-hadal sites. Complete pathways for anaerobic ammonia oxidation are predominantly identified in genomes recovered from bottom-axis sediments compared to slope sites. Our results expand knowledge of microbially-mediated elemental cycling in hadal sediments, and reveal differences in distribution of processes involved in nitrogen loss across the trench.
    Description: This study was supported by the Strategic Priority Research Program B of the Chinese Academy of Sciences (No. XDB06010201 to Y.W.).
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  • 69
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Diaz, B. P., Knowles, B., Johns, C. T., Laber, C. P., Bondoc, K. G. V., Haramaty, L., Natale, F., Harvey, E. L., Kramer, S. J., Bolaños, L. M., Lowenstein, D. P., Fredricks, H. F., Graff, J., Westberry, T. K., Mojica, K. D. A., Haëntjens, N., Baetge, N., Gaube, P., Boss, E., Carlson, C. A., Behrenfeld, M. J., Van Mooy, B. A. S., Bidle, K. D. Seasonal mixed layer depth shapes phytoplankton physiology, viral production, and accumulation in the North Atlantic. Nature Communications, 12(1), (2021): 6634, https://doi.org/10.1038/s41467-021-26836-1.
    Description: Seasonal shifts in phytoplankton accumulation and loss largely follow changes in mixed layer depth, but the impact of mixed layer depth on cell physiology remains unexplored. Here, we investigate the physiological state of phytoplankton populations associated with distinct bloom phases and mixing regimes in the North Atlantic. Stratification and deep mixing alter community physiology and viral production, effectively shaping accumulation rates. Communities in relatively deep, early-spring mixed layers are characterized by low levels of stress and high accumulation rates, while those in the recently shallowed mixed layers in late-spring have high levels of oxidative stress. Prolonged stratification into early autumn manifests in negative accumulation rates, along with pronounced signatures of compromised membranes, death-related protease activity, virus production, nutrient drawdown, and lipid markers indicative of nutrient stress. Positive accumulation renews during mixed layer deepening with transition into winter, concomitant with enhanced nutrient supply and lessened viral pressure.
    Description: This work was made possible by NASA’s Earth Science Program in support of the North Atlantic Aerosol and Marine Ecosystem Study (15-RRNES15-0011 and 0NSSC18K1563 to K.D.B.; NNX15AF30G to M.J.B.), as well as with support from the National Science Foundation (OIA-2021032 to K.D.B., OCE-157943 to C.A.C., and OCE-1756254 to B.A.S.V.M.), the Gordon and Betty Moore Foundation (Award# 3789 to K.G.V.B.), and NASA’s Future Investigators in Space Science and Technology program (FINESST; grant #826380 to K.D.B.; graduate support to BD).
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  • 70
    Publication Date: 2022-09-16
    Description: Marine protists abound, but are challenging to study, and their interactions with other microbes in nature remain largely unknown. We captured wild predatory protists (choanoflagellates) and discovered a divergent, obligately co-associated bacterial group that lives by extracting resources from these predators.
    Type: Article , NonPeerReviewed
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  • 71
    Publication Date: 2022-09-22
    Description: This dataset contains PISM simulation results of the Antarctic Ice Sheet based on code release v1.0-paleo-ensemble (https://doi.org/10.5281/zenodo.3574033). PISM is the open-source Parallel Ice Sheet Model developed mainly at UAF, USA and PIK, Germany. See documentation in https://www.pism.io. These are additional netCDF data from the same ensemble simulations already stored in doi:10.1594/PANGAEA.909728. 1) 1000-year snapshots since 125000 years before present, of ice thickness, bed topography, change in bed topography, floating/grounded mask, surface elevation, basal melt rate and vertically averaged velocity magnitude (SIA+SSA) (16GB) 2) 5000-year snapshots since 125000 years before present, SSA velocity components in x and y direction (8GB)
    Type: info:eu-repo/semantics/workingPaper
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  • 72
    Publication Date: 2022-11-14
    Description: The Indo-Pacific Warm Pool (IPWP) exerts a dominant role in global climate by releasing huge amounts of water vapour and latent heat to the atmosphere and modulating upper ocean heat content (OHC), which has been implicated in modern climate change1. The long-term variations of IPWP OHC and their effect on monsoonal hydroclimate are, however, not fully explored. Here, by combining geochemical proxies and transient climate simulations, we show that changes of IPWP upper (0–200 m) OHC over the past 360,000 years exhibit dominant precession and weaker obliquity cycles and follow changes in meridional insolation gradients, and that only 30%–40% of the deglacial increases are related to changes in ice volume. On the precessional band, higher upper OHC correlates with oxygen isotope enrichments in IPWP surface water and concomitant depletion in East Asian precipitation as recorded in Chinese speleothems. Using an isotope-enabled air–sea coupled model, we suggest that on precessional timescales, variations in IPWP upper OHC, more than surface temperature, act to amplify the ocean–continent hydrological cycle via the convergence of moisture and latent heat. From an energetic viewpoint, the coupling of upper OHC and monsoon variations, both coordinated by insolation changes on orbital timescales, is critical for regulating the global hydroclimate.
    Type: Article , PeerReviewed
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