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  • 1
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    Springer
    In:  Bull., Polar Proj. OP-O3A4, Research Techniques for High Pressure and High Temperature, New York, Springer, vol. 20, no. XVI:, pp. 217-250, (ISBN: 3-540-23712-7)
    Publication Date: 1971
    Keywords: Textbook of physics ; Laboratory measurements ; Stress ; ERYBACKI
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  • 2
    Publication Date: 2018-02-05
    Description: Recent work has shown that glaciers are a globally significant source of the micronutrient Fe to the ocean. Polar regions are particularly susceptible to climate change and have been subject to pronounced warming in the past few decades. In response to this warming, the volume of glacial meltwater runoff from Greenland has increased. This meltwater has a relatively high particulate and dissolved Fe content. Seasonal Fe limitation of marine ecosystems has been found in parts of the North Atlantic, so it has been proposed that increasing fluxes of Fe rich meltwater from Greenland to the North Atlantic could alleviate this Fe limitation and thereby increase marine primary production. However, here we use a synthesis of biogeochemical and physical oceanography studies to suggest that the physical circulation around Greenland does not favour direct export of dissolved or particulate Fe from inshore to offshore waters. The Fe budget in surface waters of the North Atlantic may therefore be insensitive to increasing meltwater fluxes from Greenland.
    Type: Article , PeerReviewed
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  • 3
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    Springer
    In:  In: Evolution of Lightweight Structures. Biologically-inspired systems, 6 . Springer, Dordrecht, pp. 39-58.
    Publication Date: 2017-07-20
    Description: While the geometries of diatom frustules have been investigated in detail, the processes leading to their formation—morphogenesis and biomineralization—are not well understood. The study of organic templates, which are suspected to be important for biosilicification of diatoms, have been mainly investigated on the basis of diverse demineralization techniques. In contrast to naturally occurring dissolution of diatom cell walls in natural habitats, all experiments in vitro were based on chemical reagents including HF- or alkali-based techniques with addition of some additives as presented in this chapter. Mostly, the amino acids (serine, threonine, hydrohyproline) diverse proteinaceous materials (frustulins, pleuralins, silaffins, silacidins, circulins) as well as polyamines have been proposed to regulate biosilicification in vivo in diatoms. In this chapter, we review the biochemical pathways and potential functions of these chemical compounds and their roles in the biomineralization process. In addition, we demonstrate the presence of chitin and discuss its potential as scaffolding as well as a template material in siliceous cell walls of diatoms. The current findings show that a complex network of different organic components is responsible for the biomineralization of diatoms. Since both the organic network and the precipitated silica are integrated in the material which forms the diatom frustule, the material properties must differ from that of pure silica. As the material properties are a crucial factor for the defensive performance of the frustule and thus their survival, it is likely that organic templates for silicification play a role both for the development process and for the improvement of the material properties of the finished shells.
    Type: Book chapter , NonPeerReviewed
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  • 4
    Publication Date: 2020-11-02
    Description: Pteropods are important organisms in high-latitude ecosystems, and they are expected to severely suffer from climate change in the near future. In this study, sedimentation patterns of two pteropod species, the polar Limacina helicina and the subarctic boreal L. retroversa, are presented. Time series data received by moored sediment traps at the Long-Term Ecological Research (LTER) Observatory HAUSGARTEN in eastern Fram Strait were analyzed during the years 2008 to 2012. Results were derived from four different deployment depths (~200, 1,250, 2,400, and 2,550 m) at two different sites (79°N 04°20′E; 79°43′N 04°30′E). A species-specific sedimentation pattern was present at all depths and at both sites showing maximal flux rates during September/October for L. helicina and in November/December for L. retroversa. The polar L. helicina was outnumbered by L. retroversa (55–99 %) at both positions and at all depths supporting the recently observed trend toward the dominance of the subarctic boreal species. The largest decrease in pteropod abundance occurred within the mesopelagic zone (~200–1,250 m), indicating loss via microbial degradation and grazing. Pteropod carbonate (aragonite) amounted up to ~75 % of the total carbonate flux at 200 m and 2–13 % of the aragonite found in the shallow traps arrived at the deep sediment traps (~160 m above the seafloor), revealing the significance of pteropods in carbonate export at Fram Strait. Our results emphasize the relevance and the need for continuation of long-term studies to detect and trace changes in pteropod abundances and community composition and thus in the vertical transport of aragonite.
    Type: Article , PeerReviewed
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  • 5
    Publication Date: 2017-10-24
    Description: Mesoscale ocean eddies are ubiquitous coherent rotating structures of water with radial scales on the order of 100 kilometers. Eddies play a key role in the transport and mixing of momentum and tracers across the World Ocean. We present a global daily mesoscale ocean eddy dataset that contains ~45 million mesoscale features and 3.3 million eddy trajectories that persist at least two days as identified in the AVISO dataset over a period of 1993–2014. This dataset, along with the open-source eddy identification software, extract eddies with any parameters (minimum size, lifetime, etc.), to study global eddy properties and dynamics, and to empirically estimate the impact eddies have on mass or heat transport. Furthermore, our open-source software may be used to identify mesoscale features in model simulations and compare them to observed features. Finally, this dataset can be used to study the interaction between mesoscale ocean eddies and other components of the Earth System.
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  • 6
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    Springer
    In:  In: Marine Protists. , ed. by Ohtsuka, S., Suzaki, T., Horiguchi, T., Suzuki, N. and Not, F. Springer, Tokyo, pp. 179-222.
    Publication Date: 2018-03-23
    Description: Radiolaria are unicellular holoplanktonic protozoa with siliceous or strontium sulfate skeletons. Mainly studied by micropaleontologists because of their excellent fossil record, they are also key members of planktonic communities and play important roles in various oceanic ecosystems. This chapter presents an overview of the current knowledge on living Radiolaria (orders Acantharia, Collodaria, Nassellaria, Spumellaria and Taxopodia). Besides general considerations on Radiolaria as a whole, it focuses on the taxonomy, biology, and ecology of each radiolarian order. Finally this chapter provides insights on research perspectives to improve our knowledge of living radiolarians and their ecological role in marine ecosystems.
    Type: Book chapter , NonPeerReviewed
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  • 7
    Publication Date: 2018-01-19
    Description: Integrated multi-trophic aquaculture (IMTA) is being explored on both economic and environmental grounds in many traditional aquaculture regions. To test a variety of suitable macroalgae species and management scenarios, a numerical model is developed to quantify the remediation of dissolved nutrients and production of macroalgae near a nutrient source. Differences in the morphological, physiological, and economic characteristics of different macroalgae species can provide flexibility when considering the cost and benefit of farming macroalgae. Results show that of the three species studied, Macrocystis pyrifera removed 75 % of dissolved inorganic nitrogen (DIN) input from a point source, while Porphyra umbilicalis and Ulva lactuca removed 5 %. Both M. pyrifera and P. umbilicalis have reduced bioremediation capacity at increasing flow rates. U. lactuca showed increased bioremediation potential as flow rate increased from low to moderate flows. Increasing the optical depth increased the bioremediation potential of M. pyrifera for moderate values of the light attenuation coefficient, whereas bioremediation was unaffected by optical depth for both U. lactuca and P. umbilicalis. Harvesting increased bioremediation capacity of all species by up to 25-fold dependent on the establishment phase and harvesting frequency. We conclude that the choice of macroalgae species greatly affects the success of IMTA and that both harvesting and farm arrangements can be used to greatly optimize bioremediation.
    Type: Article , PeerReviewed
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  • 8
    Publication Date: 2018-01-19
    Description: Hydrothermal vents on mid-oceanic ridges are patchily distributed and host many taxa endemic to deep-sea chemosynthetic environments, whose dispersal may be constrained by geographical barriers. The aim of this study was to investigate the connectivity of three populations of the ‘scaly-foot gastropod’ (Chrysomallon squamiferum Chen et al., 2015), a species endemic to hydrothermal vents in the Indian Ocean, amongst two vent fields on the Central Indian Ridge (CIR) and Longqi field, the first sampled vent field on the Southwest Indian Ridge (SWIR). Connectivity and population structure across the two mid-oceanic ridges were investigated using a 489-bp fragment of the cytochrome oxidase c subunit I (COI) gene. Phylogeographical approaches used include measures of genetic differentiation (FST), reconstruction of parsimony haplotype network, mismatch analyses and neutrality tests. Relative migrants per generation were estimated between the fields. Significant differentiation (FST = 0.28–0.29, P 〈 0.001) was revealed between the vent field in SWIR and the two in CIR. Signatures were detected indicating recent bottleneck events followed by demographic expansion in all populations. Estimates of relative number of migrants were relatively low between the SWIR and CIR, compared with values between the CIR vent fields. The present study is the first to investigate connectivity between hydrothermal vents across two mid-ocean ridges in the Indian Ocean. The phylogeography revealed for C. squamiferum indicates low connectivity between SWIR and CIR vent populations, with implications for the future management of environmental impacts for seafloor mining at hydrothermal vents in the region, as proposed for Longqi.
    Type: Article , PeerReviewed
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  • 9
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    Nature Publishing Group
    In:  Nature Reviews Microbiology, 13 (8). pp. 509-523.
    Publication Date: 2020-06-23
    Description: Microorganisms produce a wealth of structurally diverse specialized metabolites with a remarkable range of biological activities and a wide variety of applications in medicine and agriculture, such as the treatment of infectious diseases and cancer, and the prevention of crop damage. Genomics has revealed that many microorganisms have far greater potential to produce specialized metabolites than was thought from classic bioactivity screens; however, realizing this potential has been hampered by the fact that many specialized metabolite biosynthetic gene clusters (BGCs) are not expressed in laboratory cultures. In this Review, we discuss the strategies that have been developed in bacteria and fungi to identify and induce the expression of such silent BGCs, and we briefly summarize methods for the isolation and structural characterization of their metabolic products.
    Type: Article , PeerReviewed
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  • 10
    Publication Date: 2017-12-21
    Description: Cultivable Actinobacteria are the largest source of microbially derived bioactive molecules. The high demand for novel antibiotics highlights the need for exploring novel sources of these bacteria. Microbial symbioses with sessile macro-organisms, known to contain bioactive compounds likely of bacterial origin, represent an interesting and underexplored source of Actinobacteria. We studied the diversity and potential for bioactive-metabolite production of Actinobacteria associated with two marine lichens ( Lichina confinis and L. pygmaea ; from intertidal and subtidal zones) and one littoral lichen ( Roccella fuciformis ; from supratidal zone) from the Brittany coast (France), as well as the terrestrial lichen Collema auriforme (from a riparian zone, Austria). A total of 247 bacterial strains were isolated using two selective media. Isolates were identified and clustered into 101 OTUs (98% identity) including 51 actinobacterial OTUs. The actinobacterial families observed were: Brevibacteriaceae, Cellulomonadaceae, Gordoniaceae, Micrococcaceae, Mycobacteriaceae, Nocardioidaceae, Promicromonosporaceae, Pseudonocardiaceae, Sanguibacteraceae and Streptomycetaceae. Interestingly, the diversity was most influenced by the selective media rather than lichen species or the level of lichen thallus association. The potential for bioactive-metabolite biosynthesis of the isolates was confirmed by screening genes coding for polyketide synthases types I and II. These results show that littoral lichens are a source of diverse potentially bioactive Actinobacteria.
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  • 11
    Publication Date: 2018-02-05
    Description: Mature organisms often have to trade reproductive opportunities against the need to survive, especially in species with exaggerated, sexually selected traits. Life history theory predicts that old males with low residual reproductive value (RRV) would accept greater risk for current reproduction than their younger counterparts. Accordingly, we tested the prediction that, under predation risk, old males of the rock shrimp Rhynchocinetes typus pair with females faster and for a longer time than young males do. We exposed young and old dominant males (in the final ontogenetic stage, called “robustus”) to a female in the absence and presence of a predator. As predicted, older robustus males modified their mating behavior when exposed to a predator. However, in contrast to the prediction, they delayed female seizure under predation risk, possibly to carefully assess the actual threat before initiating female guarding. Once they had established the mate-guarding position, old robustus males did not interrupt it until the end of female spawning and, in the presence of predators, even guarded the female significantly longer than in predator-free treatments. In contrast, younger robustus males did not delay female seizure but abandoned the female repeatedly when a predator was present, suggesting that they perceived and responded to the predation risk. Our results suggest that older robustus males have the experience to assess threats before engaging in risky behaviors that bolster their reproductive success. Although consistent with the theory that low RRV individuals should accept greater reproductive risk, we suggest that old individuals do not recklessly engage in risky behaviors but rather cautiously evaluate the threats before investing in a potentially terminal reproductive event.
    Type: Article , PeerReviewed
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  • 12
    Publication Date: 2016-04-11
    Description: Marine Upper Jurassic sediments have recently been reported from South Africa (Knysna Outlier, Cape Province) for the first time1. They occur as shallow water, sandy clays (Brenton Beds) in association with terrestrial/fluviatile conglomerates and sandstones, which were deposited in an approximately east-west elongate intermontane basin between the Cape Fold mountains (formed of Lower Palaeozoic sediments). Post-Cretaceous erosion has reduced the original deposits to a series of small, isolated outliers, only two of which have been reported to contain marine sediments (Knysna, lower Upper Jurassic; Algoa, Valanginian2) (Fig. 1). Extensive Neocomian-Maas-trichtian outcrops are known from the continental shelf off to the south of South Africa3, and a complete mid-Jurassic to Upper Cretaceous marine succession is suspected on the Agulhas Bank infilling and overlying east-west striking, fault bounded folds of Lower Palaeozoic Cape Supergroup rocks as shown in Fig. 1 (R. V. D., in preparation and refs. 1 and 4).
    Type: Article , PeerReviewed
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  • 13
    Publication Date: 2020-07-21
    Description: The serine/threonine kinase glycogen synthase kinase-3 (GSK-3) is involved in a broad range of cellular processes including cell proliferation, apoptosis and inflammation. It is now also increasingly acknowledged as having a role to play in cognitive-related processes such as neurogenesis, synaptic plasticity and neural cell survival. Cognitive impairment represents a major debilitating feature of many neurodegenerative and psychiatric disorders, including Alzheimer's disease, mood disorders, schizophrenia and fragile X syndrome, as well as being a result of traumatic brain injury or cranial irradiation. Accordingly, GSK-3 has been identified as an important therapeutic target for cognitive impairment, and recent preclinical studies have yielded important evidence demonstrating that GSK-3 inhibitors may be useful therapeutic interventions for restoring cognitive function in some of these brain disorders. The current review summarises the role of GSK-3 as a regulator of cognitive-dependent functions, examines current preclinical and clinical evidence of the potential of GSK-3 inhibitors as therapeutic agents for cognitive impairments in neuropsychiatric disorders, and offers some insight into the current obstacles that are impeding the clinical use of selective GSK-3 inhibitors in the treatment of cognitive impairment.
    Type: Article , PeerReviewed
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  • 14
    Publication Date: 2017-04-13
    Description: The European water framework directive and the marine strategy framework directive have the objective to establish at least ‘good’ ecological status in all European waters by 2015. Therefore a classification system has to be established in each European country, in order to assess their water bodies. For the German coastal waters of the Baltic Sea, a classification system for phytoplankton based on the abundance of Cyanophyceae and Chlorophyceae was already presented. This system has been successfully adapted in regions with low salinity levels (〈10 PSU). With this study, we present the results trying to develop a classification system for our German region of the Baltic Sea characterized by higher salinity (〉15 PSU). All present taxonomic groups, most common species and functional groups were tested. It could be shown that all tested correlations to nitrogen concentration as eutrophication descriptor are relatively week. Nevertheless, the biovolume of Cryptophyceae was found to be the most reliable phytoplankton composition indicator, which could serve as future assessment criterion. Furthermore, as proposed by some experts, the use of maximal dissolved winter nitrogen concentration as eutrophication descriptor might be an advantage over using the total nitrogen concentrations in summer.
    Type: Article , PeerReviewed
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  • 15
    Publication Date: 2020-11-23
    Description: Large amounts of the greenhouse gas methane are released from the seabed to the water column1, where it may be consumed by aerobic methanotrophic bacteria2. The size and activity of methanotrophic communities, which determine the amount of methane consumed in the water column, are thought to be mainly controlled by nutrient and redox dynamics3–7. Here, we report repeated measurements of methanotrophic activity and community size at methane seeps west of Svalbard, and relate them to physical water mass properties and modelled ocean currents. We show that cold bottom water, which contained a large number of aerobic methanotrophs, was displaced by warmer water with a considerably smaller methanotrophic community within days. Ocean current simulations using a global ocean/sea-ice model suggest that this water mass exchange is consistent with short-term variations in the meandering West Spitsbergen Current. We conclude that the shift from an offshore to a nearshore position of the current can rapidly and severely reduce methanotrophic activity in the water column. Strong fluctuating currents are common at many methane seep systems globally, and we suggest that they affect methane oxidation in the water column at other sites, too.
    Type: Article , PeerReviewed
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  • 16
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    Nature Publishing Group
    In:  Nature Climate Change, 5 (1). pp. 71-79.
    Publication Date: 2017-02-24
    Description: Climate change is altering oceanic conditions in a complex manner, and the concurrent amendment of multiple properties will modify environmental stress for primary producers. So far, global modelling studies have focused largely on how alteration of individual properties will affect marine life. Here, we use global modelling simulations in conjunction with rotated factor analysis to express model projections in terms of regional trends in concomitant changes to biologically influential multi-stressors. Factor analysis demonstrates that regionally distinct patterns of complex oceanic change are evident globally. Preliminary regional assessments using published evidence of phytoplankton responses to complex change reveal a wide range of future responses to interactive multi-stressors with 〈20–300% shifts in phytoplankton physiological rates, and many unexplored potential interactions. In a future ocean, provinces will encounter different permutations of change that will probably alter the dominance of key phytoplankton groups and modify regional productivity, ecosystem structure and biogeochemistry. Consideration of regionally distinct multi-stressor patterns can help guide laboratory and field studies as well as the interpretation of interactive multi-stressors in global models.
    Type: Article , PeerReviewed
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  • 17
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    Nature Publishing Group
    In:  Nature Climate Change, 5 (1). pp. 12-14.
    Publication Date: 2017-04-13
    Description: Reflection on the rapidly growing field of ocean acidification research highlights priorities for future research on the changing ocean.
    Type: Article , PeerReviewed
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  • 18
    Publication Date: 2020-11-23
    Description: A comparison of micropaleontological data on the distribution of the Cycladophora davisiana radiolarian species in the surface sediment layer and the Late Quaternary sediments from the Subarctic Pacific and Far East marginal seas allowed conclusions concerning the possible conditions and occurrence of intermediate waters during the last glacial maximum. We used the modern data on the C. davisiana species, which is a micropaleontological indicator of the cold oxygen-rich upper intermediate water mass, which is now forming only in the Sea of Okhotsk. The high amount of C. davisiana in sediments of the last glacial maximum may point to the possible formation and expansion of the ventilated intermediate water in the most part of the Subarctic paleo-Pacific: the Bering Sea, the Sea of Okhotsk, within the NW Gyre, and in the Gulf of Alaska.
    Type: Article , PeerReviewed
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  • 19
    Publication Date: 2017-12-19
    Description: Thin oceanic crust is formed by decompression melting of the upper mantle at mid-ocean ridges, but the origin of the thick and buoyant continental crust is enigmatic. Juvenile continental crust may form from magmas erupted above intraoceanic subduction zones, where oceanic lithosphere subducts beneath other oceanic lithosphere. However, it is unclear why the subduction of dominantly basaltic oceanic crust would result in the formation of andesitic continental crust at the surface. Here we use geochemical and geophysical data to reconstruct the evolution of the Central American land bridge, which formed above an intra-oceanic subduction system over the past 70Myr. We find that the geochemical signature of erupted lavas evolved from basaltic to andesitic about 10Myr ago - coincident with the onset of subduction of more oceanic crust that originally formed above the Galápagos mantle plume. We also find that seismic P-waves travel through the crust at velocities intermediate between those typically observed for oceanic and continental crust. We develop a continentality index to quantitatively correlate geochemical composition with the average P-wave velocity of arc crust globally. We conclude that although the formation and evolution of continents may involve many processes, melting enriched oceanic crust within a subduction zone - a process probably more common in the Archaean - can produce juvenile continental crust.
    Type: Article , PeerReviewed
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  • 20
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    Springer
    In:  In: The Red Sea: The Formation, Morphology, Oceanography and Environment of a Young Ocean Basin. Springer Earth System Sciences . Springer, Berlin, Germany, pp. 487-509. ISBN 978-3-662-45200-4
    Publication Date: 2015-04-17
    Description: Coral reefs are the most abundant shallow water ecosystems in the Red Sea, harboring a high species diversity and habitat complexity over large environmental gradients. At the same time the semi-enclosed ocean basin and its partly extreme environmental conditions may promote species evolution being distinct from Indo-Pacific coral reefs. Extreme conditions are found in the southern Red Sea, where temperatures reach up to 33 °C in summer and where nutrient input is high. Mechanisms of organism adjustment to these conditions are of particular interest in the light of climate change research. Towards the north, conditions become more ‘coral-promoting’ finally reaching temperatures between 21–27 °C (winter-summer) and clear waters at the northern end of the Red Sea (Gulf of Aqaba). In this chapter, we summarize the current knowledge about the biology of shallow water, symbiotic, reef-building corals of the Red Sea. We start with an overview on the environmental conditions of the Red Sea, the history of coral reef research in this region and a general introduction into coral biology, before we describe the ecophysiology of Red Sea corals. Coral ecophysiology is presented in the context of varying environmental conditions over depth (e.g., light), between seasons, and over latitudes (e.g., light, temperature, nutrients). Mechanisms and patterns of coral reproduction are discussed in the context of seasonal and latitudinal environmental changes. Finally, we briefly describe anthropogenic influences on Red Sea coral reefs. Acclimatization mechanisms of corals to changing conditions over a depth gradient (mainly light reduction) have been well studied in the Gulf of Aqaba and include the following metabolic adjustments with depth: (i) an upregulation of light-harvesting pigments (chlorophyll a) and a downregulation of photo-protective pigments (xanthophyll), (ii) an increase of heterotrophy, and (iii) a decrease of metabolic activity (e.g., calcification and growth). In addition, a change in the symbiont composition (Symbiodinium clade and/or type) over depth was observed in some coral species. Seasonal environmental changes (mainly light availability, temperature, nutrients) lead to various metabolic responses of the corals, including (i) changes in zooxanthellae pigmentation and density and (ii) changes in the metabolic activity. In particular, changes in calcification and growth rates can be observed with lowest rates during low temperatures in winter. Interestingly, however, this reverses in the southern Red Sea, where calcification rates are higher in winter than in summer. This kind of latitudinal shift is also evident in the timing of reproduction, which occurs earlier in the year (January–March) in the south compared to the north (March–August). This indicates that growth and reproduction are strongly linked to temperature, following a single temperature optimum, which occurs at different times throughout the year from north to south. Furthermore, this hints towards a high phenotypic plasticity (acclimatization) rather than local genetic adaptation of the investigated coral species. A clear shift in the genetic population structure from north to south in another coral species, however, indicates local adaption. Adjusting mechanisms need to be further understood in order to provide indication for predicted climate change effects.
    Type: Book chapter , NonPeerReviewed
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  • 21
    Publication Date: 2018-07-04
    Description: Sub-micron marine aerosol particles (PM1) were collected over the period 22 June–21 July 2011 during the RV MARIA S. MERIAN cruise MSM 18/3, which travelled from the Cape Verdean island of São Vicente to Gabon, in the process crossing the tropical Atlantic Ocean with its equatorial upwelling regime. According to air mass origin and the chemical composition of the sampled aerosol particles, three main regimes could be established. Aerosol particles in the first part of the cruise were mainly of marine origin (Region I). In the second part of the cruise, marine influences mixed with increasing influence from biomass burning (Region II). In the final part of the cruise, which approached the African mainland, the biomass burning influence became dominant (Region III). Generally, aerosol particles were dominated by sulfate (caverage = 2.0 μg m−3) and ammonium ions (caverage = 0.7 μg m−3), which were well-correlated and increased slightly over the duration of the cruise. High concentrations of water-insoluble organic carbon (WISOC; caverage = 0.4 μg m−3) were found, most likely as a result of the high oceanic productivity in this region. Water-soluble organic carbon (WSOC) concentrations increased from 0.26 μg m−3 in Region I to 2.3 μg m−3 in Region III, most likely as a result of biomass burning influences. The major organic aerosol constituents were oxalic acid, methanesulfonic acid (MSA), and aliphatic amines. MSA concentrations were quite constant during the cruise (caverage = 42 ng m−3). Aliphatic amines were most abundant in Region I, with concentrations of ~ 20 ng m−3. Oxalic acid showed the opposite trend, with average concentrations of 12 ng m−3 in Region I and 158 ng m−3 in Region III. The α-dicarbonyl compounds glyoxal and methylglyoxal were detected in the aerosol particles in the low ng m−3 range and were closely correlated with oxalic acid. MSA and aliphatic amines arise from biogenic marine sources, whereas oxalic acid and the α-dicarbonyl compounds were attributed to biomass burning. Concentrations of n-alkanes increased from 0.8 to 4.7 ng m−3 over the duration of the cruise. PAHs and hopanes were abundant only in Region III (caverage of PAHs = 0.13 ng m−3; caverage of hopanes = 0.19 ng m−3). Levoglucosan was identified in several samples obtained in Region III, with caverage = 1.9 ng m−3, which points to (aged) biomass burning influences. The organic compounds quantified in this study could explain 8.3 % of WSOC in Regions I, where aliphatic amines and MSA dominated, 3.7 % of WSOC in Region II and 2.5 % of WSOC in Region III, where oxalic acid dominated.
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  • 22
    Publication Date: 2021-05-19
    Description: An ocean circulation model is run using two different idealized equatorial basin configurations under steady wind forcing. Both model versions produce bands of vertically alternating zonal flow at depth, similar to observed Equatorial Deep Jets (EDJs) and with a time scale corresponding to that of the gravest equatorial basin mode for the dominant baroclinic vertical normal mode. Both model runs show evidence for enhanced variability in the surface signature of the North Equatorial Counter Current (NECC) with the same time scale. We also find the same link between the observed NECC and the EDJs in the Atlantic by comparing the signature of the EDJ in moored zonal velocity data at 23° W on the equator with the signature of the NECC in geostrophic velocities from altimeter data. We argue that the presence of a peak in variability in the NECC associated with the EDJ basin mode period is evidence that the influenceatthis time scale is upward, from the EDJ to the NECC
    Type: Article , PeerReviewed , info:eu-repo/semantics/article
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  • 23
    Publication Date: 2017-12-19
    Description: The stomachs of most vertebrates operate at an acidic pH of 2 generated by the gastric H+/K+-ATPase located in parietal cells. The acidic pH in stomachs of vertebrates is believed to aid digestion and to protect against environmental pathogens. Little attention has been placed on whether acidic gastric pH regulation is a vertebrate character or a deuterostome ancestral trait. Here, we report alkaline conditions up to pH 10.5 in the larval digestive systems of ambulacraria (echinoderm + hemichordate), the closest relative of the chordate. Microelectrode measurements in combination with specific inhibitors for acid-base transporters and ion pumps demonstrated that the gastric alkalization machinery in sea urchin larvae is mainly based on direct H+ secretion from the stomach lumen and involves a conserved set of ion pumps and transporters. Hemichordate larvae additionally utilized HCO 3- transport pathways to generate even more alkaline digestive conditions. Molecular analyses in combination with acidification experiments supported these findings and identified genes coding for ion pumps energizing gastric alkalization. Given that insect larval guts were also reported to be alkaline, our discovery raises the hypothesis that the bilaterian ancestor utilized alkaline digestive system while the vertebrate lineage has evolved a strategy to strongly acidify their stomachs.
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  • 24
    Publication Date: 2015-06-30
    Description: Ocean acidification studies in the past decade have greatly improved our knowledge of how calcifying organisms respond to increased surface ocean CO2 levels. It has become evident that, for many organisms, nutrient availability is an important factor that influences their physiological responses and competitive interactions with other species. Therefore, we tested how simulated ocean acidification and eutrophication (nitrate and phosphate enrichment) interact to affect the physiology and ecology of a calcifying chlorophyte macroalga (Halimeda opuntia (L.) J.V. Lamouroux) and its common noncalcifying epiphyte (Dictyota sp.) in a 4-week fully crossed multifactorial experiment. Inorganic nutrient enrichment (+NP) had a strong influence on all responses measured with the exception of net calcification. Elevated CO2 alone significantly decreased electron transport rates of the photosynthetic apparatus and resulted in phosphorus limitation in both species, but had no effect on oxygen production or respiration. The combination of CO2 and +NP significantly increased electron transport rates in both species. While +NP alone stimulated H. opuntia growth rates, Dictyota growth was significantly stimulated by nutrient enrichment only at elevated CO2, which led to the highest biomass ratios of Dictyota to Halimeda. Our results suggest that inorganic nutrient enrichment alone stimulates several aspects of H. opuntia physiology, but nutrient enrichment at a CO2 concentration predicted for the end of the century benefits Dictyota sp. and hinders its calcifying basibiont H. opuntia.
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  • 25
    Publication Date: 2015-07-16
    Description: Symbiotic relationships between phytoplankton and N-2-fixing microorganisms play a crucial role in marine ecosystems. The abundant and widespread unicellular cyanobacteria group A (UCYN-A) has recently been found to live symbiotically with a haptophyte. Here, we investigated the effect of nitrogen (N), phosphorus (P), iron (Fe) and Saharan dust additions on nitrogen (N-2) fixation and primary production by the UCYN-A-haptophyte association in the subtropical eastern North Atlantic Ocean using nifH expression analysis and stable isotope incubations combined with single-cell measurements. N-2 fixation by UCYN-A was stimulated by the addition of Fe and Saharan dust, although this was not reflected in the nifH expression. CO2 fixation by the haptophyte was stimulated by the addition of ammonium nitrate as well as Fe and Saharan dust. Intriguingly, the single-cell analysis using nanometer scale secondary ion mass spectrometry indicates that the increased CO2 fixation by the haptophyte in treatments without added fixed N is likely an indirect result of the positive effect of Fe and/or P on UCYN-A N-2 fixation and the transfer of N-2-derived N to the haptophyte. Our results reveal a direct linkage between the marine carbon and nitrogen cycles that is fuelled by the atmospheric deposition of dust. The comparison of single-cell rates suggests a tight coupling of nitrogen and carbon transfer that stays balanced even under changing nutrient regimes. However, it appears that the transfer of carbon from the haptophyte to UCYN-A requires a transfer of nitrogen from UCYN-A. This tight coupling indicates an obligate symbiosis of this globally important diazotrophic association.
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  • 26
    Publication Date: 2017-04-12
    Description: Metals constitute an important group of abiotic stressors that elicit stress responses in marine algae that include the production of reactive oxygen species (ROS). Silver (Ag) is a highly toxic metal to organisms but despite this there are relatively few studies on how it affects marine macroalgae (seaweeds). In a landmark study published in 1977 the first information was provided on the accumulation of Ag in Fucus spp. (Phaeophyceae) from the Looe estuary, located in south-west England, an area with a long history of mining activity. In the present study, the estuary has been re-visited and the patterns of Ag accumulation in two Fucus spp. and sediment re-examined after 35 years. We conclude that Ag concentrations in sediment and macroalgae from specific sites within the catchment remain high, but more generally sediment concentrations have declined by approximately 65 % and the dissolved, bioavailable fraction by 24 % over this period. In addition, from laboratory studies we provide data on the speciation and toxic effects of Ag under different salinity regimes in the euryhaline brown seaweed, Fucus ceranoides. From these exposure experiments, it was found that with increasing Ag concentrations growth was inhibited and lipid peroxidation associated with ROS production increased. The magnitude of the toxic effects was greater at a salinity of 10 than 28 psu which reflects the greater bioavailability of the toxic species of Ag (Ag+ and AgCl0) at reduced salinities. These findings emphasise the importance of investigating the effects of metal pollution in conjunction with other, natural, environmental stressors such as salinity.
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  • 27
    Publication Date: 2020-02-18
    Description: Aurelia spp. is a cosmopolite scyphozoan species and likely the most studied jellyfish in the world. Its pelagic–benthic life cycle is complex, and the benthic asexual reproducing stage (polyp) is acknowledged fundamentally in bloom onset. Despite this, field investigations remain scarce and are mainly restrained to the western Pacific Ocean. Thau lagoon (43°23′59.10″ N 3°36′37.15″ E), a semi-enclosed system that harbours a resident population of Aurelia sp., is in essence a natural laboratory that offers an ideal framework to investigate the life cycle of the species. We here used a non-destructive approach consisting on a field survey over the entire lagoon (ca. 7 ha) and several substrate types by free diving to examine the distribution and habitat use of Aurelia sp. benthic population. We show that polyps were largely distributed over the entire lagoon, settled mainly on artificial hard substrates, thereby stressing the promoting role of anthropogenic perturbations in coastal areas, i.e. habitat modification, for jellyfish proliferations. Therefore, our study suggest a potential increase in Aurelia sp. benthic populations as an outcome of mounting coastal constructions in the near future; the consequences of which ultimately might promote an increase in jellyfish outbreaks.
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  • 28
    Publication Date: 2017-04-12
    Description: Quasi-decadal variability in solar irradiance has been suggested to exert a substantial effect on Earth’s regional climate. In the North Atlantic sector, the 11-year solar signal has been proposed to project onto a pattern resembling the North Atlantic Oscillation (NAO), with a lag of a few years due to ocean-atmosphere interactions. The solar/NAO relationship is, however, highly misrepresented in climate model simulations with realistic observed forcings. In addition, its detection is particularly complicated since NAO quasi-decadal fluctuations can be intrinsically generated by the coupled ocean-atmosphere system. Here we compare two multi-decadal ocean-atmosphere chemistry-climate simulations with and without solar forcing variability. While the experiment including solar variability simulates a 1–2-year lagged solar/NAO relationship, comparison of both experiments suggests that the 11-year solar cycle synchronizes quasi-decadal NAO variability intrinsic to the model. The synchronization is consistent with the downward propagation of the solar signal from the stratosphere to the surface.
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  • 29
    Publication Date: 2017-12-19
    Description: Estuarine systems play a critical role as nursery areas for some fish species. Nursery function, nevertheless, is likely to vary among estuaries, mostly due to differences in habitat quality. High quality nursery habitats are those in which growth and survival of early stages of fish are enhanced. The nutritional condition of larval fishes has vital implications for their mortality and growth, and thereby their recruitment. This study aimed to compare the nutritional condition of Gichristella aestuaria larvae, using individual RNA-DNA ratios and growth rates in the upper reaches of six estuaries in South Africa to find the environmental factors that better determine the nutritional condition of fish larvae. Physico-chemical factors as well as calorific value of zooplankton were used to correlate to fish body condition. Results showed that the larvae of G. aestuaria from the freshwater rich Gamtoos and the Sundays estuaries were in better nutritional condition than the larvae from other estuaries, while larvae from the Swartkops Estuary, a highly eutrophic system, presented the worst nutritional condition of all studied larvae. Salinity and the abundance of zooplankton were the major factors determining the nutritional condition of G. aestuaria larvae in these warm temperate estuaries. In addition, our results suggest that the match-mismatch hypothesis might also be important in estuarine systems. This study represents one of the few studies worldwide that applied a multispecies growth model for fish larvae in warm temperate estuaries
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  • 30
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    In:  Marine Biology, 162 (12). pp. 2447-2448.
    Publication Date: 2018-06-20
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  • 31
    Publication Date: 2019-01-21
    Description: Many exploited fish species are threatened with collapse and the European eel is no exception. Its abundance has declined dramatically and various reasons account for this, among them the introduction of the invasive swim bladder nematode Anguillicola crassus. For developing an adequate immune response against this parasite, variation at the genes of the major histocompatibility complex (MHC), a key component of the adaptive immune system, might be essential and assessing their diversity might provide critical information for improving conservation strategies. Here, we characterized the MHC class II of the European eel. We provide evidence for relatively high diversity at both MHC IIA and MHC IIB, which contrasts with findings for other endangered species. Furthermore, both genes show signs of site-specific positive selection. The absence of overall positive selection at MHC IIB might, however, suggests that demographic shifts have negatively impacted that gene, thereby possibly reducing the adaptive potential of the European eel.
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  • 32
    Publication Date: 2017-02-20
    Description: Dissolved oxygen in sea water affects marine habitats and biogeochemical cycles. Oceanic zones with oxygen deficits represent 7% of the volume and 8% of the area of the oceans, and are thought to be expanding. One of the most pronounced lies in the region off Peru, where mesoscale activity in the form of fronts and eddies is strong. Here, we study the dynamics of the Peruvian oxygen minimum zone in a Lagrangian framework, using a coupled physical-biogeochemical numerical model and finite-size Lyapunov exponent fields, to evaluate the role of mesoscale activity. We find that, at depths between 380 and 600 m, mesoscale structures have two distinct roles. First, their mean positions and paths delimit and maintain the oxygen minimum zone boundaries. Second, their high-frequency fluctuations inject oxygen across the oxygen minimum zone boundaries and eddy fluxes are one order of magnitude higher than mean oxygen fluxes. We conclude that these eddy fluxes contribute to the ventilation of the Peruvian oxygen minimum zone.
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  • 33
    Publication Date: 2019-07-08
    Description: Stable carbon isotopes of dissolved inorganic carbon (δ13CDIC) in the ocean are generally not well understood as they are governed by a complex interplay of biological processes and air–sea exchange. In the Arctic Ocean, δ13CDIC values are prone to change in the near future with rapidly changing climate conditions. This study provides a baseline to assess the δ13CDIC of the Arctic Ocean with a focus on upper to intermediate waters (to ~500 m). Measured δ13CDIC values in the Arctic Ocean range from ~−0.6 to +2.2 ‰. In the Eurasian Basin, the δ13CDIC values lie between ~1 and 1.5 ‰ and exhibit little variation within the upper layers. In the Canada Basin, δ13CDIC values reach 2 ‰ in the surface layer, with lowest values of ~−0.6 ‰ found at ~200 m water depth. At greater depth, δ13CDIC values range from ~1 to 1.5 ‰ within both basins. In the Canada Basin, nutrient levels are higher than in the Eurasian Basin and associated variations in δ13CDIC are clearly related to biological processes. However, low δ13CDIC values in the Canada Basin are also strongly influenced by non-equilibrium air–sea exchange processes. The different δ13CDIC patterns between the Canada Basin and the Eurasian Basin appear to be linked to differences in transport processes within the Arctic Ocean halocline. The upper layers in the Canada basins have direct contributions of waters from the Laptev, East Siberian and Chukchi shelves, which contain elevated fractions of river waters and sea-ice related brines, whereas their counterparts, in the Eurasian Basin, are mostly formed by halocline waters from the Barents and Kara seas. River waters have low δ13CDIC of ~−8 ‰ on average, but in the Arctic basins this signal is mostly lost and δ13CDIC values show only a weak correlation to river water fractions contained in the water mass. No relation between δ13CDIC and sea-ice related brine contribution is apparent.
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  • 34
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    In:  In: Encyclopedia of Marine Geosciences. , ed. by Harff, J., Meschede, M., Petersen, S. and Thiede, J. Springer, Dordrecht, The Netherlands, Chapter 37, 1-2. ISBN 978-94-007-6644-0
    Publication Date: 2018-01-19
    Description: Definition Ocean acidification refers to the process of increasing seawater acidity by dissolving additional carbon dioxide (CO2) from the atmosphere. As CO2 dissolves in seawater, it forms carbonic acid (H2CO3), which readily dissociates into bicarbonate (HCO3−) and hydrogen (H+) ions. The hydrogen ion concentration determines the acidity of seawater, expressed by the pH scale. Part of the hydrogen ions released in this process is buffered by the seawater carbonate system by consuming carbonate ions (CO32−) and forming additional bicarbonate. As pH is defined as the negative logarithm of the hydrogen ion concentration, pH decreases as the acidity increases (Fig. 1). Fig. 1 The process of ocean acidification: (1) atmospheric carbon dioxide (CO2) dissolving in seawater; (2) dissolved CO2 reacting with water to form carbonic acid (H2CO3); (3) carbonic acid dissociating to bicarbonate (HCO3−) and hydrogen ion (H+); and (4) hydrogen ion reacting with carbonate (CO3 ... This is an excerpt from the content
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  • 35
    Publication Date: 2021-04-23
    Description: The symbiotic association of corals and unicellular algae of the genus Symbiodinium in the southern Persian/Arabian Gulf (PAG) display an exceptional heat tolerance, enduring summer peak temperatures of up to 36 °C. As yet, it is not clear whether this resilience is related to the presence of specific symbiont types that are exclusively found in this region. Therefore, we used molecular markers to identify the symbiotic algae of three Porites species along 〉1000 km of coastline in the PAG and the Gulf of Oman and found that a recently described species, Symbiodinium thermophilum, is integral to coral survival in the southern PAG, the world’s hottest sea. Despite the geographic isolation of the PAG, we discovered that representatives of the S. thermophilum group can also be found in the adjacent Gulf of Oman providing a potential source of thermotolerant symbionts that might facilitate the adaptation of Indian Ocean populations to the higher water temperatures expected for the future. However, corals from the PAG associated with S. thermophilum show strong local adaptation not only to high temperatures but also to the exceptionally high salinity of their habitat. We show that their superior heat tolerance can be lost when these corals are exposed to reduced salinity levels common for oceanic environments elsewhere. Consequently, the salinity prevailing in most reefs outside the PAG might represent a distribution barrier for extreme temperature-tolerant coral/Symbiodinium associations from the PAG.
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  • 36
    Publication Date: 2017-05-23
    Description: The ~16-ka-long record of explosive eruptions from Shiveluch volcano (Kamchatka, NW Pacific) is refined using geochemical fingerprinting of tephra and radiocarbon ages. Volcanic glass from 77 prominent Holocene tephras and four Late Glacial tephra packages was analyzed by electron microprobe. Eruption ages were estimated using 113 radiocarbon dates for proximal tephra sequence. These radiocarbon dates were combined with 76 dates for regional Kamchatka marker tephra layers into a single Bayesian framework taking into account the stratigraphic ordering within and between the sites. As a result, we report ~1,700 high-quality glass analyses from Late Glacial–Holocene Shiveluch eruptions of known ages. These define the magmatic evolution of the volcano and provide a reference for correlations with distal fall deposits. Shiveluch tephras represent two major types of magmas, which have been feeding the volcano during the Late Glacial–Holocene time: Baidarny basaltic andesites and Young Shiveluch andesites. Baidarny tephras erupted mostly during the Late Glacial time (~16–12.8 ka BP) but persisted into the Holocene as subordinate admixture to the prevailing Young Shiveluch andesitic tephras (~12.7 ka BP–present). Baidarny basaltic andesite tephras have trachyandesite and trachydacite (SiO2 〈 71.5 wt%) glasses. The Young Shiveluch andesite tephras have rhyolitic glasses (SiO2 〉 71.5 wt%). Strongly calc-alkaline medium-K characteristics of Shiveluch volcanic glasses along with moderate Cl, CaO and low P2O5 contents permit reliable discrimination of Shiveluch tephras from the majority of other large Holocene tephras of Kamchatka. The Young Shiveluch glasses exhibit wave-like variations in SiO2 contents through time that may reflect alternating periods of high and low frequency/volume of magma supply to deep magma reservoirs beneath the volcano. The compositional variability of Shiveluch glass allows geochemical fingerprinting of individual Shiveluch tephra layers which along with age estimates facilitates their use as a dating tool in paleovolcanological, paleoseismological, paleoenvironmental and archeological studies. Electronic tables accompanying this work offer a tool for statistical correlation of unknown tephras with proximal Shiveluch units taking into account sectors of actual tephra dispersal, eruption size and expected age. Several examples illustrate the effectiveness of the new database. The data are used to assign a few previously enigmatic wide-spread tephras to particular Shiveluch eruptions. Our finding of Shiveluch tephras in sediment cores in the Bering Sea at a distance of ~600 km from the source permits re-assessment of the maximum dispersal distances for Shiveluch tephras and provides links between terrestrial and marine paleoenvironmental records.
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  • 37
    Publication Date: 2019-09-23
    Description: Global warming was reported to cause growth reductions in tropical shallow water corals in both, cooler and warmer, regions of the coral species range. This suggests regional adaptation with less heat-tolerant populations in cooler and more thermo-tolerant populations in warmer regions. Here, we investigated seasonal changes in the in situ metabolic performance of the widely distributed hermatypic coral Pocillopora verrucosa along 12 degrees latitudes featuring a steep temperature gradient between the northern (28.5 degrees N, 21-27 degrees C) and southern (16.5 degrees N, 28-33 degrees C) reaches of the Red Sea. Surprisingly, we found little indication for regional adaptation, but strong indications for high phenotypic plasticity: Calcification rates in two seasons (winter, summer) were found to be highest at 28-29 degrees C throughout all populations independent of their geographic location. Mucus release increased with temperature and nutrient supply, both being highest in the south. Genetic characterization of the coral host revealed low inter-regional variation and differences in the Symbiodinium clade composition only at the most northern and most southern region. This suggests variable acclimatization potential to ocean warming of coral populations across the Red Sea: high acclimatization potential in northern populations, but limited ability to cope with ocean warming in southern populations already existing at the upper thermal margin for corals
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  • 38
    Publication Date: 2019-09-23
    Description: Increasing anthropogenic CO2 concentration in the atmosphere is altering sea water carbonate chemistry with unknown biological and ecological consequences. Whereas some reports are beginning to emerge on the effects of ocean acidification (OA) on fish, very little is known about the impact of OA on jellyfish. In particular, the benthic stages of metagenetic species are virtually unstudied in this context despite their obvious importance for bloom dynamics. Hence, we conducted tri-trophic food chain experiments using the algae Rhodomonas salina as the primary producer, the copepod Acartia tonsa as the primary consumer and the benthic life stage of the scyphozoans Cyanea capillata and Chrysaora hysoscella as secondary consumers. Two experiments were conducted examining the effects of different levels of CO2 and food quality (experiment 1) and the effect of food quality and quantity (experiment 2) on the growth and respiration of scyphozoan polyps. Polyp growth and carbon content (µg polyp−1) were not affected by the CO2 treatments, but were significantly negatively affected by P limitation of the food in C. capillata but not in Ch. hysoscella. Growth and carbon content were reduced in low-food treatments, but increased with decreasing P limitation in high- and low-food treatments in C. capillata. Respiration was not significantly influenced by food quality and quantity in C. capillata. We conclude that phosphorus can be a limiting factor affecting the fitness of scyphopolyps and that P-limited food is of poor nutritional quality. Furthermore, OA, at least using realistic end-of-century scenarios, will have no direct effect on the growth of scyphistomae
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  • 39
    Publication Date: 2017-04-12
    Description: Current pressures to mine polymetallic sulfide deposits pose threats to the animal communities found at deep-sea hydrothermal vents. Management plans aimed at preserving these unusual communities require knowledge of historical and contemporary forces that shaped the distributions and connectivity of associated species. As most vent research has focused on the eastern Pacific and mid-Atlantic ridge systems less is known about Indo-Pacific vents, where mineral extraction activities are imminent. Deep-sea mussels (Bivalvia: Mytilidae) of the genus Bathymodiolus include the morphotypic species B. septemdierum, B. brevior, B. marisindicus, and B. elongatus which are among the dominant vent taxa in western Pacific back-arc basins and the Central Indian Ridge. To assess their interpopulational relationships, we examined multilocus genotypes based on DNA sequences from four nuclear and four mitochondrial genes, and allozyme variation encoded by eleven genes. Bayesian assignment methods grouped mussels from seven widespread western Pacific localities into a single cluster, whereas the Indian Ocean mussels were clearly divergent. Thus, we designate two regional metapopulations. Notably, contemporary migration rates among all sites appeared to be low despite limited population differentiation, which highlights the necessity of obtaining realistic data on recovery times and fine-scale population structure to develop and manage conservation units effectively. Future studies using population genomic methods to address these issues in a range of species will help to inform management plans aimed at mitigating potential impacts of deep-sea mining in the Indo-Pacific region.
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  • 40
    Publication Date: 2019-01-23
    Description: The Atlantic meridional overturning circulation (AMOC) and the subpolar gyre (SPG) are important elements in mechanisms for multidecadal variability in models in the North Atlantic Ocean. In this study, a 2000-year long global ocean model integration forced with the atmospheric patterns associated with a white noise North Atlantic Oscillation (NAO) index is shown to have three distinct timescales of North Atlantic Ocean variability. First, an interannual timescale with variability shorter than 15 years, that can be related to Ekman dynamics. Second, a multidecadal timescale, on the 15- to 65-year range, that is mainly concentrated in the SPG region and is controlled by constructive interference between density anomalies around the gyre and the changing NAO forcing. Finally, the centennial timescales, with variability longer than 65 years, that can be attributed to the ocean being in a series of quasi-equilibrium states. The relationship between the ocean’s response and the NAO index differs for each timescale; the 15-year and shorter timescales are directly related to the NAO of the same year, 15- to 65-year timescales are dependent on the NAO index in the last 25–30 years in a sinusoidal sense while the 65-year and longer timescales relate to a sum of the last 50–80 years of the NAO index.
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  • 41
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    In:  Climatic Change, 132 (4). pp. 489-500.
    Publication Date: 2017-12-19
    Description: Extraordinarily strong El Niño events, such as those of 1982/1983 and 1997/1998, cause havoc with weather around the world, adversely influence terrestrial and marine ecosystems in a number of regions and have major socio-economic impacts. Here we show by means of climate model integrations that El Niño events may be boosted by global warming. An important factor causing El Niño intensification is warming of the western Pacific warm pool, which strongly enhances surface zonal wind sensitivity to eastern equatorial Pacific sea surface temperature anomalies. This in conjunction with larger and more zonally asymmetric equatorial Pacific upper ocean heat content supports stronger and longer lasting El Niños. The most intense events, termed Super El Niños, drive extraordinary global teleconnections which are associated with exceptional surface air temperature and rainfall anomalies over many land areas.
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  • 42
    Publication Date: 2017-04-12
    Description: Over the past 60 years, both average daily precipitation intensity and extreme precipitation have increased in many regions1, 2, 3. Part of these changes, or even individual events4, 5, have been attributed to anthropogenic warming6, 7. Over the Black Sea and Mediterranean region, the potential for extreme summertime convective precipitation has grown8 alongside substantial sea surface temperature increase. A particularly devastating convective event experienced in that region was the July 2012 precipitation extreme near the Black Sea town of Krymsk9. Here we study the effect of sea surface temperature (SST) increase on convective extremes within the region, taking the Krymsk event as a showcase example. We carry out ensemble sensitivity simulations with a convection-permitting atmospheric model and show the crucial role of SST increase in the extremeness of the event. The enhancement of lower tropospheric instability due to the current warmer Black Sea allows deep convection to be triggered, increasing simulated precipitation by more than 300% relative to simulations with SSTs characteristic of the early 1980s. A highly nonlinear precipitation response to incremental SST increase suggests that the Black Sea has exceeded a regional threshold for the intensification of convective extremes. The physical mechanism we identify indicates that Black Sea and Mediterranean coastal regions may face abrupt amplifications of convective precipitation under continued SST increase, and illustrates the limitations of thermodynamical bounds for estimating the temperature scaling of convective extremes.
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  • 43
    Publication Date: 2017-12-19
    Description: To date, the parameters that determine the rupture area of great subduction zone earthquakes remain contentious. On 1 April 2014, the Mw 8.1 Iquique earthquake ruptured a portion of the well-recognized northern Chile seismic gap but left large highly coupled areas un-ruptured. Marine seismic reflection and swath bathymetric data indicate that structural variations in the subducting Nazca Plate control regional-scale plate-coupling variations, and the limited extent of the 2014 earthquake. Several under-thrusting seamounts correlate to the southward and up-dip arrest of seismic rupture during the 2014 Iquique earthquake, thus supporting a causal link. By fracturing of the overriding plate, the subducting seamounts are likely further responsible for reduced plate-coupling in the shallow subduction zone and in a lowly coupled region around 20.5°S. Our data support that structural variations in the lower plate influence coupling and seismic rupture offshore Northern Chile, whereas the structure of the upper plate plays a minor role.
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  • 44
    Publication Date: 2021-04-23
    Description: Oceanic dissolved organic carbon (DOC) is an important carbon pool, similar in magnitude to atmospheric CO2, but the fate of its oldest forms is not well understood. Hot hydrothermal circulation may facilitate the degradation of otherwise un-reactive dissolved organic matter, playing an important role in the long-term global carbon cycle. The oldest, most recalcitrant forms of DOC, which make up most of oceanic DOC, can be recovered by solid-phase extraction. Here we present measurements of solid-phase extractable DOC from samples collected between 2009 and 2013 at seven vent sites in the Atlantic, Pacific and Southern oceans, along with magnesium concentrations, a conservative tracer of water circulation through hydrothermal systems. We find that magnesium and solid-phase extractable DOC concentrations are correlated, suggesting that solid-phase extractable DOC is almost entirely lost from solution through mineralization or deposition during circulation through hydrothermal vents with fluid temperatures of 212-401°C. In laboratory experiments, where we heated samples to 380°C for four days, we found a similar removal efficiency. We conclude that thermal degradation alone can account for the loss of solid-phase extractable DOC in natural hydrothermal systems, and that its maximum lifetime is constrained by the timescale of hydrothermal cycling, at about 40 million years
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  • 45
    Publication Date: 2016-11-03
    Description: Cold-water corals (CWC) are widely distributed around the world forming extensive reefs at par with tropical coral reefs. They are hotspots of biodiversity and organic matter processing in the world’s deep oceans. Living in the dark they lack photosynthetic symbionts and are therefore considered to depend entirely on the limited flux of organic resources from the surface ocean. While symbiotic relations in tropical corals are known to be key to their survival in oligotrophic conditions, the full metabolic capacity of CWC has yet to be revealed. Here we report isotope tracer evidence for efficient nitrogen recycling, including nitrogen assimilation, regeneration, nitrification and denitrification. Moreover, we also discovered chemoautotrophy and nitrogen fixation in CWC and transfer of fixed nitrogen and inorganic carbon into bulk coral tissue and tissue compounds (fatty acids and amino acids). This unrecognized yet versatile metabolic machinery of CWC conserves precious limiting resources and provides access to new nitrogen and organic carbon resources that may be essential for CWC to survive in the resource-depleted dark ocean.
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  • 46
    Publication Date: 2019-02-25
    Description: The interoceanic transfer of seawater between the Indian Ocean and the Atlantic, ‘Agulhas leakage’, forms a choke point for the overturning circulation in the global ocean. Here, by combining output from a series of high-resolution ocean and climate models with in situ and satellite observations, we construct a time series of Agulhas leakage for the period 1870–2014. The time series demonstrates the impact of Southern Hemisphere westerlies on decadal timescales. Agulhas leakage shows a correlation with the Atlantic Multi-decadal Oscillation on multi-decadal timescales; the former leading by 15 years. This is relevant for climate in the North Atlantic
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  • 47
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    Nature Publishing Group
    In:  Nature Climate Change, 5 (4). pp. 343-347.
    Publication Date: 2017-04-13
    Description: Sea-level rise1 is one of the most pressing aspects of anthropogenic global warming with far-reaching consequences for coastal societies. However, sea-level rise did2, 3, 4, 5, 6, 7 and will strongly vary from coast to coast8, 9, 10. Here we investigate the long-term internal variability effects on centennial projections of dynamic sea level (DSL), the local departure from the globally averaged sea level. A large ensemble of global warming integrations has been conducted with a climate model, where each realization was forced by identical CO2 increase but started from different atmospheric and oceanic initial conditions. In large parts of the mid- and high latitudes, the ensemble spread of the projected centennial DSL trends is of the same order of magnitude as the globally averaged steric sea-level rise, suggesting that internal variability cannot be ignored when assessing twenty-first-century DSL trends. The ensemble spread is considerably reduced in the mid- to high latitudes when only the atmospheric initial conditions differ while keeping the oceanic initial state identical; indicating that centennial DSL projections are strongly dependent on ocean initial conditions.
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  • 48
    Publication Date: 2019-09-23
    Description: Restructure data-gathering and evaluation networks to address climate change, energy, food, health and water provision, say Yonglong Lu and colleagues.
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  • 49
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    In:  In: Integrated Analysis of Interglacial Climate Dynamics (INTERDYNAMIC). , ed. by Schulz, M. and Paul, A. Springer Briefs in Earth System Sciences . Springer, Cham, pp. 49-53. ISBN 978-3-319-00692-5
    Publication Date: 2019-09-23
    Description: The hypothesis that the tropical oceans lead the global warming at the Termination I and II by ~2,000 to ~3,000 years (Visser et al. 2003) whereas melting of the northern continental ice masses is lacking behind challenges the Milankovitch theory of climate change and emphasizes the role of the tropics for global climate change. Although the simultaneous multi-proxy approach of planktonic foraminiferal Mg/Ca, δ18O and δ44/40Ca from tropical sediment core SO-164-03-4 (16° 32.37′ N; 72° 12.31′ W; 2,744 m) from the Caribbean tend to confirm the observation by Visser et al. (2003) we interpret the shift between Mg/Ca and δ18O in core SO-164-03-4 to be due to local changes in sea-surface salinity (SSS) variations triggered by glacial/interglacial related shifts of the Inter-tropical Convergence Zone (ITCZ).
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  • 50
    Publication Date: 2017-12-19
    Description: Global mean surface warming has stalled since the end of the twentieth century1, 2, but the net radiation imbalance at the top of the atmosphere continues to suggest an increasingly warming planet. This apparent contradiction has been reconciled by an anomalous heat flux into the ocean3, 4, 5, 6, 7, 8, induced by a shift towards a La Niña-like state with cold sea surface temperatures in the eastern tropical Pacific over the past decade or so. A significant portion of the heat missing from the atmosphere is therefore expected to be stored in the Pacific Ocean. However, in situ hydrographic records indicate that Pacific Ocean heat content has been decreasing9. Here, we analyse observations along with simulations from a global ocean–sea ice model to track the pathway of heat. We find that the enhanced heat uptake by the Pacific Ocean has been compensated by an increased heat transport from the Pacific Ocean to the Indian Ocean, carried by the Indonesian throughflow. As a result, Indian Ocean heat content has increased abruptly, which accounts for more than 70% of the global ocean heat gain in the upper 700 m during the past decade. We conclude that the Indian Ocean has become increasingly important in modulating global climate variability.
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  • 51
    Publication Date: 2019-01-24
    Description: Biologists studying animals in their natural environment are increasingly using sensors such as accelerometers in animal-attached ‘smart’ tags because it is widely acknowledged that this approach can enhance the understanding of ecological and behavioural processes. The potential of such tags is tempered by the difficulty of extracting animal behaviour from the sensors which is currently primarily dependent on the manual inspection of multiple time series graphs. This is time consuming and error-prone for the domain expert and is now the limiting factor for realising the value of tags in this area. We introduce TimeClassifier, a visual analytic system for the classification of time series data for movement ecologists. We deploy our system with biologists and report two real-world case studies of its use
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  • 52
    Publication Date: 2018-01-19
    Description: A seasonal forecast system is presented, based on the global coupled climate model MPI-ESM as used for CMIP5 simulations. We describe the initialisation of the system and analyse its predictive skill for surface temperature. The presented system is initialised in the atmospheric, oceanic, and sea ice component of the model from reanalysis/observations with full field nudging in all three components. For the initialisation of the ensemble, bred vectors with a vertically varying norm are implemented in the ocean component to generate initial perturbations. In a set of ensemble hindcast simulations, starting each May and November between 1982 and 2010, we analyse the predictive skill. Bias-corrected ensemble forecasts for each start date reproduce the observed surface temperature anomalies at 2–4 months lead time, particularly in the tropics. Niño3.4 sea surface temperature anomalies show a small root-mean-square error and predictive skill up to 6 months. Away from the tropics, predictive skill is mostly limited to the ocean, and to regions which are strongly influenced by ENSO teleconnections. In summary, the presented seasonal prediction system based on a coupled climate model shows predictive skill for surface temperature at seasonal time scales comparable to other seasonal prediction systems using different underlying models and initialisation strategies. As the same model underlying our seasonal prediction system—with a different initialisation—is presently also used for decadal predictions, this is an important step towards seamless seasonal-to-decadal climate predictions.
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  • 53
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    Nature Publishing Group
    In:  Nature, 521 (7553). pp. 428-430.
    Publication Date: 2017-12-19
    Description: An index of water-circulation strength in the North Atlantic Ocean has been derived from sea-level measurements. This provides fresh evidence of the ocean's leading role in multidecadal climate variability. See Letter p.508
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  • 54
    Publication Date: 2017-05-23
    Description: Keilhack reported his impressions from his participation at the International Geological Congress in Russia in 1897 in several consecutive articles. In the more than 100 years since that time, a lot has changed. Apart from the totally different style of scientific presentations, with almost no illustrations, except maps, being shown during a talk, field trips were also a very special event, involving huge amounts of logistics. More than 200 people were transported to very remote areas of the European part of Russia. As well as organizing transportation by coaches and horses, places to stay overnight had to be found in large numbers and special regulations had to be issued by the government to allow access to various outcrops. Keilhacks visit of the oil-producing sites around Baku are of special interest, since they belonged obviously to the most productive ones on the globe at that time.
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  • 55
    Publication Date: 2019-09-23
    Description: Different genetic types of marine sediments that were deposited on the continental slope of the Kronotskii Peninsula with the rate of several tens of centimeters per thousand years during the last 20 ka have been investigated. It is established that their lithological, mineral, and chemical compositions were determined by climate changes.
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  • 56
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    In:  In: The Red Sea. , ed. by Rasul, N. M. A. and Stewart, I. C. F. Springer, Berlin, Heidelberg, pp. 251-266. ISBN 978-3-662-45200-4
    Publication Date: 2015-08-06
    Description: After two companies were awarded a 30-year license for the exploration and exploitation of metalliferous sediments in the Atlantis II Deep (Red Sea) in 2011, we herewith present conclusions and recommendations derived from an environmental risk assessment, the Metalliferous Sediment Atlantis II Deep (MESEDA) study, conducted in the period 1977–1981. For economic reasons, this program was discontinued before final report delivery and fell dormant for 30 years. The effects of environmental disturbances of the benthic and the near-bottom water layer habitats in and around the mining site deserve further and more modern risk assessments. We examine the relevance of our 1981 recommendations and of subsequent publications to the extended period of resource extraction planned for this century and recommend more up-to-date risk assessment investigations and evaluations.
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  • 57
    Publication Date: 2019-09-23
    Description: Increasingly, spatial geochemical zonation, present as geographically distinct, subparallel trends, is observed along hotspot tracks, such as Hawaii and the Galapagos. The origin of this zonation is currently unclear. Recently zonation was found along the last B70 Myr of the Tristan-Gough hotspot track. Here we present new Sr–Nd–Pb–Hf isotope data from the older parts of this hotspot track (Walvis Ridge and Rio Grande Rise) and re-evaluate published data from the Etendeka and Parana flood basalts erupted at the initiation of the hotspot track. We show that only the enriched Gough, but not the less-enriched Tristan, component is present in the earlier (70–132 Ma) history of the hotspot. Here we present a model that can explain the temporal evolution and origin of plume zonation for both the Tristan-Gough and Hawaiian hotspots, two end member types of zoned plumes, through processes taking place in the plume sources at the base of the lower mantle.
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  • 58
    Publication Date: 2019-09-23
    Description: The squat lobster Pleuroncodes monodon is a key species of the highly productive, but oxygen-poor upwelling system of the Eastern Tropical South Pacific. Observations of P. monodon in the water column off Peru have led to the hypothesis that anoxic conditions force this otherwise primarily benthic species to adopt a pelagic lifestyle. Here we show that off Peru, P. monodon can be found in the oxygenated surface water, but also on the anoxic seafloor. Our physiological experiments demonstrate that juvenile and adult specimens have a very low critical respiratory pO2 of 0.5 kPa and that adults survive anoxia for 30.5–70.5 h. Anoxic conditions at the seafloor should therefore force P. monodon to regularly migrate to the oxic surface layer in order to restore energy reserves and recycle metabolic end products of anaerobic metabolism. It was recently estimated that the ammonium supply mediated by diel vertical migrations (DVMs) of zooplankton and nekton considerably fuels bacterial anaerobic ammonium oxidation—a major loss process for fixed nitrogen in the ocean. These estimates were based on the implicit assumption that anoxia does not result in a down-regulation of ammonium excretion. We here show that exposure to anoxia elicits a fourfold reduction in ammonium excretion from 2.1 ± 0.6 µmol h−1 g dry weight−1 under normoxic to 0.5 ± 0.6 µmol h−1 g DW−1 under anoxic conditions in P. monodon. Estimates of ammonium supply to the anoxic core of oxygen minimum zones via DVM therefore are likely too high.
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  • 59
    Publication Date: 2019-09-23
    Description: Increasing atmospheric CO2 concentrations are causing ocean acidification (OA), altering carbonate chemistry with consequences for marine organisms. Here we show that OA increases by 46–212% the production of phenolic compounds in phytoplankton grown under the elevated CO2 concentrations projected for the end of this century, compared with the ambient CO2 level. At the same time, mitochondrial respiration rate is enhanced under elevated CO2 concentrations by 130–160% in a single species or mixed phytoplankton assemblage. When fed with phytoplankton cells grown under OA, zooplankton assemblages have significantly higher phenolic compound content, by about 28–48%. The functional consequences of the increased accumulation of toxic phenolic compounds in primary and secondary producers have the potential to have profound consequences for marine ecosystem and seafood quality, with the possibility that fishery industries could be influenced as a result of progressive ocean changes
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  • 60
    Publication Date: 2020-11-09
    Description: Coexisting bacteria form various microbial communities in human body parts. In these ecosystems they interact in various ways and the properties of the interaction network can be related to the stability and functional diversity of the local bacterial community. In this study, we analyze the interaction network among bacterial OTUs in 11 locations of the human body. These belong to two major groups. One is the digestive system and the other is the female genital tract. In each local ecosystem we determine the key species, both the ones being in key positions in the interaction network and the ones that dominate by frequency. Beyond identifying the key players and discussing their biological relevance, we also quantify and compare the properties of the 11 networks. The interaction networks of the female genital system and the digestive system show totally different architecture. Both the topological properties and the identity of the key groups differ. Key groups represent four phyla of prokaryotes. Some groups appear in key positions in several locations, while others are assigned only to a single body part. The key groups of the digestive and the genital tracts are totally different.
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  • 61
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    Nature Publishing Group
    In:  Nature Climate Change, 5 (1). pp. 4-6.
    Publication Date: 2019-09-23
    Description: A sustainable global ocean observation system requires timely implementation of the framework for ocean observing. The recent Qingdao Global Ocean Summit highlighted the need for a more coherent institutional response to maintain an integrated ocean-observing system.
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  • 62
    Publication Date: 2017-04-13
    Description: The variability of the East Asian summer monsoon (EASM) is studied using a pacemaker technique driven by ENSO in an atmospheric general circulation model (AGCM) coupled to a slab mixed layer model. In the pacemaker experiments, sea surface temperature (SST) is constrained to observations in the eastern equatorial Pacific through a q-flux that measures the contribution of ocean dynamics to SST variability, while the AGCM is coupled to the slab model. An ensemble of pacemaker experiments is analyzed using a multivariate EOF analysis to identify the two major modes of variability of the EASM. The results show that the pacemaker experiments simulate a substantial amount (around 45 %) of the variability of the first mode (the Pacific-Japan pattern) in ERA40 from 1979 to 1999. Different from previous work, the pacemaker experiments also simulate a large part (25 %) of the variability of the second mode, related to rainfall variability over northern China. Furthermore, we find that the lower (850 hPa) and the upper (200 hPa) tropospheric circulation of the first mode display the same degree of reproducibility whereas only the lower part of the second mode is reproducible. The basis for the success of the pacemaker experiments is the ability of the experiments to reproduce the observed relationship between El Niño Southern Oscillation (ENSO) and the EASM.
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  • 63
    Publication Date: 2018-07-02
    Description: In aquatic ecosystems, body size has a remarkable influence on the hierarchical structure of food webs and trophic interactions. The trophic relationship between mosquito larvae and copepods offers an exception to the conspicuous feature that the bigger consumes the smaller. We here address this ecological question by investigating the predation impact of the epibenthic cyclopoid copepod Megacyclops formosanus on a 30-h old mosquito larvae Aedes aegypti in a controlled environment. Our quantitative assessment depicted the effect of M. formosanus on 30-h old mosquito larvae. We found that copepod captured mosquito larvae on an average 1.6 ± 0.20 larvae ind−1 h−1 with an attack speed 22.80 ± 8.52 mm s−1. In addition, copepod predation dramatically affected mosquito behavior. In the presence of predator, mosquito larvae significantly decreased browsing and filtering paths, while using mixed foraging tactics and shifting the habitat use from the bottom to surfacing or air–water interfacing. These results provide a mechanistic understanding of the interaction between mosquito and cyclopoid copepods, and show that copepod predation constrains the habitat use of mosquito larvae. Copepod predation pressure results in reduced facultative behavioral responses that challenge mosquito life history and ultimately percolate its population fitness.
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  • 64
    Publication Date: 2018-05-28
    Description: Salinity strongly influences development and distribution of the sea star Asterias rubens. In Kiel Fjord, located in the western Baltic Sea, A. rubens is the only echinoderm species and one of the main benthic predators controlling blue mussel (Mytilus edulis) abundance. However, Kiel Fjord with an average salinity of about 15 is located close to the eastern distribution boundary of A. rubens in the Baltic Sea. In this study, we combined field and laboratory investigations to test whether the salinity of Kiel Fjord is high enough to enable successful development of A. rubens. Sea star eggs were fertilized in vitro, and development was monitored in the laboratory at four salinities (9, 12, 15 and 18) for 10 weeks. At a salinity of 9, development ceased prior to the blastula stage. At a salinity of 12, no larvae reached metamorphosis. At higher salinities, larvae developed normally and metamorphosed into juvenile sea stars. Abundances of A. rubens larvae and settled juveniles were also observed in Kiel Fjord and correlated to salinity values measured from March until June during 6 years (2005–2010). Results revealed high A. rubens settlement rates only in 2009, the year when salinity was the highest and least variable during the period of spawning and larval development. It appears that only years with high and stable salinities permit recruitment of A. rubens in Kiel Fjord. Projected desalination of the Baltic Sea could shift the distribution of A. rubens in the western Baltic Sea north-westwards and may lead to local extinction of a keystone species of the benthic ecosystem.
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  • 65
    Publication Date: 2020-04-03
    Description: Benthic communities north of Svalbard are less investigated than in other Arctic shelf regions, as this area was covered by sea-ice during most of the year. Improving our knowledge on this region is timely, however, since climate change is strongly evident there, particularly with regard to the extent of sea-ice decline and its huge ecological impact on all marine biota, including the benthos. Moreover, longer ice-free periods will certainly lead to an increase in human activity levels in the area, including bottom trawling. In two adjacent shelf and slope regions off northern Svalbard, we studied the composition of epibenthic megafauna and seafloor habitat structures by analyzing seabed images taken with both still and video cameras. In addition, we also used an Agassiz trawl to catch epibenthic organisms for ground-truthing seabed-image information. A wide variety of mostly sessile organisms 141 epibenthic taxa were identified in the images. The brittle star Ophiura sarsii and the soft coral Gersemia rubiformis were the most common species. At all stations 〉300 m in depth, evidence of trawling activities was detected at the seabed. The distribution of the benthic fauna in the study area exhibited a clear depth zonation, mainly reflecting depth-related differences in seabed composition. We conclude that natural factors determining the composition of the seafloor mostly affect the distribution and composition of epibenthic assemblages. Anthropogenic impact indicated by the trawl scours found is likely also important at smaller spatial scales.
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  • 66
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    In:  Paläontologische Zeitschrift, 45 (1/2). pp. 41-52.
    Publication Date: 2015-03-03
    Description: Three species of Foraminifera, which were ususally regarded as members of the Ammonia beccarii (L.)-group or closely related, are investigated. The material comes mainly from the lagoon of Cochin and from the shelf off Cochin (SW-India), Malabarcoast). Sections and Stereoscan-microphotographs revealed considerable differences in the internal structure (double or simple septae, different shape of the tooth-plates, areal or interiomarginal situation of the septal apertures). This leads to the conclusion, that only one species (Rotalia beccarii var. sobrina SHUPACK 1934) is a true Ammonia. Rotalia beccarii var. tepida CUSHMAN 1926 should be put to the genus Discorbis, Rotalia pauciloculata PHLEGER & PARKER 1951 is regarded as a species of Pseudoeponides. Some ecological observations are added.
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  • 67
    Publication Date: 2019-02-25
    Description: Fossils of marine microorganisms such as planktic foraminifera are among the cornerstones of palaeoclimatological studies. It is often assumed that the proxies derived from their shells represent ocean conditions above the location where they were deposited. Planktic foraminifera, however, are carried by ocean currents and, depending on the life traits of the species, potentially incorporate distant ocean conditions. Here we use high-resolution ocean models to assess the footprint of planktic foraminifera and validate our method with proxy analyses from two locations. Results show that foraminifera, and thus recorded palaeoclimatic conditions, may originate from areas up to several thousands of kilometres away, reflecting an ocean state significantly different from the core site. In the eastern equatorial regions and the western boundary current extensions, the offset may reach 1.5 °C for species living for a month and 3.0 °C for longer-living species. Oceanic transport hence appears to be a crucial aspect in the interpretation of proxy signals.
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  • 68
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    Nature Publishing Group
    In:  The ISME Journal, 9 (3). pp. 670-682.
    Publication Date: 2017-04-13
    Description: Microbiota provide their hosts with a range of beneficial services, including defense from external pathogens. However, host-associated microbial communities themselves can act as a source of opportunistic pathogens depending on the environment. Marine poikilotherms and their microbiota are strongly influenced by temperature, but experimental studies exploring how temperature affects the interactions between both parties are rare. To assess the effects of temperature, temperature stress and infection on diversity, composition and dynamics of the hemolymph microbiota of Pacific oysters (Crassostrea gigas), we conducted an experiment in a fully-crossed, three-factorial design, in which the temperature acclimated oysters (8 or 22 °C) were exposed to temperature stress and to experimental challenge with a virulent Vibrio sp. Strain. We monitored oyster survival and repeatedly collected hemolymph of dead and alive animals to determine the microbiome composition by 16s rRNA gene amplicon pyrosequencing. We found that the microbial dynamics and composition of communities in healthy animals (including infection survivors) were significantly affected by temperature and temperature stress, but not by infection. The response was mediated by changes in the incidence and abundance of operational taxonomic units (OTUs) and accompanied by little change at higher taxonomic levels, indicating dynamic stability of the hemolymph microbiome. Dead and moribund oysters, on the contrary, displayed signs of community structure disruption, characterized by very low diversity and proliferation of few OTUs. We can therefore link short-term responses of host-associated microbial communities to abiotic and biotic factors and assess the potential feedback between microbiota dynamics and host survival during disease.
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  • 69
    Publication Date: 2017-04-13
    Description: Here we show that coupling a high-resolution one-column ocean model to an atmospheric general circulation model dramatically improves simulation of the Madden–Julian oscillation (MJO) to have realistic strength, period, and propagation speed. The mechanism for the simulated MJO involves both frictional wave-convective conditional instability of the second kind (Frictional wave-CISK) and air–sea convective intraseasonal interaction (ASCII). In particular, better resolving the fine structure of upper ocean temperature, especially the warm layer, produces more vigorous atmosphere–ocean interaction and strengthens intraseasonal variations in both SST and atmospheric circulation. This helps organize and strengthen deep convection, inducing a stronger Kelvin-wave like perturbation and frictional near-surface convergence to the east. In addition, the warmer SST ahead of the MJO also acts to destabilize the boundary layer and enhance frictional convergence. These lead to a more realistic eastward-propagating MJO. A suite of sensitivity experiments were performed to show the robustness of the mechanisms and to demonstrate: (1) that mean state differences are not the main contributors to the improved simulation of our coupled model; (2) the role of SST variability in enhancing frictional convergence and intraseasonal variations in precipitation, and (3) that the simulation is significantly degraded when the first ocean model layer is thicker than 10 m. Our coupled model results are consistent with observations and demonstrate a simple but effective means to significantly improve MJO simulation and potentially also forecasts.
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  • 70
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    Nature Publishing Group
    In:  Nature Climate Change, 5 (5). pp. 419-423.
    Publication Date: 2017-12-19
    Description: The useful energy services and energy density value of fossil carbon fuels could be retained for longer timescales into the future if their combustion is balanced by CO2 recapture and storage. We assess the global balance between fossil carbon supply and the sufficiency (size) and capability (technology, security) of candidate carbon stores. A hierarchy of value for extraction-to-storage pairings is proposed, which is augmented by classification of CO2 containment as temporary (〈1,000 yr) or permanent (〉100,000 yr). Using temporary stores is inefficient and defers an intergenerational problem. Permanent storage capacity is adequate to technically match current fossil fuel reserves. However, rates of storage creation cannot balance current and expected rates of fossil fuel extraction and CO2 consequences. Extraction of conventional natural gas is uniquely holistic because it creates the capacity to re-inject an equivalent tonnage of carbon for storage into the same reservoir and can re-use gas-extraction infrastructure for storage. By contrast, balancing the extraction of coal, oil, biomass and unconventional fossil fuels requires the engineering and validation of additional carbon storage. Such storage is, so far, unproven in sufficiency.
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  • 71
    Publication Date: 2019-09-24
    Description: Near-inertial oscillations are ubiquitous in the ocean and are believed to play an important role in the global climate system. Studies on wind power input to near-inertial motions (WPI) have so far focused primarily on estimating the time-mean WPI, with little attention being paid to its temporal variability. In this study, a combination of atmospheric reanalysis products, a high-resolution ocean model and linear regression models are used to investigate for the first time the relationship between interannual variability of WPI in the North Atlantic and the North Atlantic Oscillation (NAO), motivated by the idea that the NAO serves as a good indicator for storminess over the North Atlantic and that storms account for the majority of WPI. It is found that WPI at low and high latitudes of the North Atlantic is significantly correlated to the NAO, owing to its influence on the configuration of the storm track. Positive (negative) NAO conditions are associated with increased WPI in the subpolar (subtropical) ocean. Basin-wide WPI is found to be significantly enhanced under negative NAO conditions, but is not significantly different from the climatological average under positive NAO conditions. This indicates a weak inverse relationship between basin-wide WPI and the NAO, contradicting intuitive expectations. The asymmetric impact of the NAO on basin-wide WPI results from greater sensitivity of WPI to near-inertial wind forcing at lower latitudes due to the variation of the Coriolis parameter with latitude.
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  • 72
    Publication Date: 2018-01-10
    Description: Nemrut volcano, adjacent to Lake Van (Turkey), is one of the most important peralkaline silicic centres in the world, where magmatism for ~570,000 years has been dominated by peralkaline trachytes and rhyolites. Using onshore and Lake Van drill site tephra samples, we document the phenocryst and glass matrix compositions, confirming a complete spectrum from very rare mafic to dominantly silicic magmas. Magma mixing has been common and, along with the multi-lineage nature of the magmas, indicates that Nemrut has been a very open system where, nevertheless, compositionally zoned caps developed during periods of relative eruptive quiescence. Geothermometry suggests that the intermediate-silicic magmas evolved in an upper crustal magma reservoir at temperatures between 1100 and 750 °C, at fO2 close to the FMQ buffer. The silicic magmas either were halogen poor or exsolved a halogen-rich phase prior to or during eruption. An unusual Pb-rich phase, with up to 98.78 wt% PbO, is interpreted as having exsolved from the intermediate-rhyolitic magmas.
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  • 73
    Publication Date: 2019-09-23
    Description: Ocean islands, seamounts and volcanic ridges are thought to form above mantle plumes. Yet, this mechanism cannot explain many volcanic features on the Pacific Ocean floor and some might instead be caused by cracks in the oceanic crust linked to the reorganization of plate motions. A distinctive bend in the Hawaiian–Emperor volcanic chain has been linked to changes in the direction of motion of the Pacific Plate, movement of the Hawaiian plume, or a combination of both. However, these links are uncertain because there is no independent record that precisely dates tectonic events that affected the Pacific Plate. Here we analyse the geochemical characteristics of lava samples collected from the Musicians Ridges, lines of volcanic seamounts formed close to the Hawaiian–Emperor bend. We find that the geochemical signature of these lavas is unlike typical ocean island basalts and instead resembles mid-ocean ridge basalts. We infer that the seamounts are unrelated to mantle plume activity and instead formed in an extensional setting, due to deformation of the Pacific Plate. 40Ar/39Ar dating reveals that the Musicians Ridges formed during two time windows that bracket the time of formation of the Hawaiian–Emperor bend, 53–52 and 48–47 million years ago. We conclude that the Hawaiian–Emperor bend was formed by plate–mantle reorganization, potentially triggered by a series of subduction events at the Pacific Plate margins.
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  • 74
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    In:  Biospektrum - das Magazin für Biowissenschaften, 21 (1). pp. 17-19.
    Publication Date: 2018-07-04
    Description: Single cell genomics has advanced the field of microbiology to recognizing each microbial cell as a separate and unique entity. The combination of new high-throughput sequencing technologies, constantly improving bioinformatic tools, and single cell genomic/metagenomic workflows has greatly enhanced our understanding of the uncultivated microbial world.
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  • 75
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    Nature Publishing Group
    In:  Nature Methods, 12 (5). pp. 377-378.
    Publication Date: 2020-06-24
    Description: Today’s predictions are tomorrow’s priors
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  • 76
    Publication Date: 2017-04-11
    Description: Given the ubiquity of the parasites and their important fitness consequences on mate and offspring condition, selection for the ability to distinguish healthy from parasitized potential mates is a key process to enhance Darwinian fitness. In this study, we experimentally evaluated how the immunological experience of two potential partners influences mate choice, using the sex-role-reversed pipefish Syngnathus typhle. We exposed S. typhle to immune challenges with heat-killed Vibrio bacteria and investigated whether the activation of the immune system determined mate preferences. Our results demonstrate that the immune status of the potential partners influenced female mate preference, such that females that were exposed to an immune challenge became choosy and favored unchallenged males. Males, however, did not show any preferences for female immune status. In this context, we discuss mate choice decisions and behavioral plasticity as a complex result of immune challenge, severity of infection, as well as trans-generational effects.
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  • 77
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    In:  Marine Biology, 162 (12). pp. 2449-2470.
    Publication Date: 2018-06-20
    Description: During the past three decades, coastal marine waters have become among the most invaded habitats globally. Ascidians are among the most notorious invaders in these ecosystems. Owing to their rapid spread, frequent population outbreaks, and associated negative ecological and economic impacts, invasive ascidians have become a global problem. Thus, the study of ascidian invasions has become a prominent area of invasion biology. Here, we review current knowledge and conclude that ascidians are good models for studying invasion success in the marine realm. Firstly, we summarize the reconstruction of invasion pathways or colonization histories and associated negative impacts of invasive ascidians, and address the urgent need to clarify ambiguous taxonomy of ascidians. Secondly, we discuss factors that underlie or facilitate invasion success of ascidians, including vectors of introduction and spread, environmental changes, biological traits, and possible genetic issues. Finally, we summarize current science-based policies and management solutions that are in place to prevent and control spread of invasive ascidians. We conclude by highlighting key research questions that remain to be answered, and propose future research to investigate mechanisms of invasion success in the marine realm using ascidians as model systems.
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  • 78
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    In:  International Journal of Earth Sciences, 104 (8). pp. 2057-2083.
    Publication Date: 2020-10-21
    Description: The Lausitz (Lusatia) Volcanic Field is part of the Central European Volcanic Province, and its magmas represent an alkaline trend from olivine nephelinites and basanites to trachytes and phonolites, typical for intraplate settings. Neighbouring volcanic fields are the České Strˇedohorˇí Mountains to the south-west and the Fore-Sudetic Basin in Lower Silesia to the east. More than 1000 volcanic structures associated with approximately 500 vents have been located within this volcanic field. Residuals of scoria cones, lava lakes, lava flows and maardiatreme in filling occur in situ near the level of the original syn-volcanic terrain. In more deeply eroded structures, volcanic relicts outcrop as plugs or feeders. Evolved rocks occur as monogenetic domes or intrusions in diatremes, while their volcaniclastic equivalents are rare. Twenty-three localities were dated using the 40Ar/39Ar method. The ages range from 35 to 27 Ma, with a focus around 32–29 Ma, indicating Late Eocene and mainly Oligocene volcanism for the LVF. Differentiated rocks appear to be slightly younger than less differentiated. No geographical age clusters are apparent.
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  • 79
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    In:  Arktos, 1 (Article 18).
    Publication Date: 2019-07-08
    Description: As part of the hydrologic cycle, the freshwater system plays a pivotal role for the Arctic Ocean. It maintains the strong stratification in the upper waters and fosters the formation of sea ice on the circum-Arctic shelves from where the ice is being exported toward Fram Strait and into the Nordic Seas. Recent projections of climate change under the greenhouse effect predict severe changes for the hydrologic cycle in the Arctic. This manuscript reviews the current knowledge of past changes in freshwater fluxes to and from the Arctic Ocean and their possible impact on ocean circulation and climate outside the Arctic during the past 200,000 years. It becomes evident that abrupt and large-volume discharges into the Arctic Ocean during times of major climate transitions were capable of disturbing the global ocean circulation and triggering further climate change, e.g., at the onset of the Younger Dryas cold event. During sea-level rise in the Holocene, a connection between the increasing areas available for sea ice formation, the position of the ice margin in the ice export area (the Fram Strait) and the deepwater convection in the Greenland Sea is suggested. Further work is needed to investigate the effects of other catastrophic freshwater discharges from previously ice-dammed lakes in northern Eurasia during the Weichselian and Saalian glaciations. Events like the 8.2 ka and the Younger Dryas, which were associated with flooding and routing of glacial meltwaters and had a significant effect on climate, could serve as a template to better validate the impact of similar occurrences in the past. To date, the actual influence of the earlier events on ocean circulation and climate remains elusive.
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  • 80
    Publication Date: 2020-11-04
    Description: This work is dedicated to the study of benthic and planktonic foraminifers and is a contribution to the multidisciplinary investigations of Core PS51/154-11 from the Laptev Sea. The paleoecological analysis of foraminiferal assemblages makes it possible to reconstruct in detail environmental changes on the western continental margin of the Laptev Sea during the Late Pleistocene and Holocene. The examined core dated by the AMS radiocarbon method is divided into intervals that reflect main stages in the regional evolution for the last 17.6 k.y.: early deglaciation, Bølling–Allerød warming, Younger Dryas cooling, transition to the Interglacial, Holocene climatic optimum, Middle-Late Holocene. The presence of subpolar planktonic foraminifers and benthic species Cassidulina neoteretis (Tappan) provides grounds to reconstruct for the continental slope area stages of the enhanced activity of subsurface Atlantic-derived water in the intervals of 12.0–14.7 and 0.6–5.4 ka. The benthic assemblage reflects changes in depositional environments related to the postglacial transgression and also climatic change impacts affecting bioproductivity. The events defined on the basis of foraminifers are correlated with climatic oscillations and changes in circulation of water masses.
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  • 81
    Publication Date: 2019-09-23
    Description: The Laptev Sea and East Siberian Sea are extended shallow shelf seas which were largely land fallen during glacial periods when the global mean sea level was more than 100 m below its present value. To understand the environmental history, and, in particular, the evolution of the large offshore permafrost complexes in this region, a reconstruction of the sea-level variation and shoreline migration was undertaken. Sufficient geological information by sea-level indicators is missing and, in recent studies, the eustatic sea-level curve is commonly applied, neglecting any isostatic adjustment processes. In this study, we discuss the influence of glacial isostatic adjustment (GIA), which describes the deformational response of the solid earth and the resulting sea-level variations due to the water mass redistribution between ice sheets and ocean during a glacial cycle. Motivated as a sensitivity study, we consider GIA-induced sea-level variations from the last glacial maximum (LGM) to present and apply an earth model ensemble which covers the range of reasonable rheological parametrisations for a passive continental margin. The geodynamically consistent sea-level reconstructions are applied to predict the shoreline retreat in the Laptev and East Siberian seas. We confirm with this study that the application of the eustatic sea-level curve is a valid first-order approximation for reconstructing the shoreline position from LGM to present, whereas the sea-level heights away from the shoreline inferred from the eustatic sea-level curve differ markedly from GIA predictions.
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  • 82
    Publication Date: 2019-07-08
    Description: Using high-resolution seismic data, this study aims at investigating the evolution and morphological diversity of subsea permafrost features on the eastern Laptev Sea shelf, Arctic Siberia. Several seismic facies were recognized. These relate to the major environmental changes, which affected the Laptev Sea area before, during, and after the last global transgression. Because this shallow shelf was part of the Beringian landmass, we consider a prominent subsurface seismic basal reflector as the top of the former terrestrial permafrost table. Five zones differing in geometry, reflection patterns, depths, and continuity of the permafrost top are identified. Where visible, the upper 70 m of the sediments consists of epigenetically and syngenetically frozen ice-poor sandy deposits at the base, possibly of early last glacial age, marine isotope stages (MIS) 5 and 4. These are followed by late glacial, ice-rich facies interpreted to be MIS 3 to 2. The early Holocene (MIS 1) features well-stratified lagoonal and taberal deposits. As verified by radiocarbon-dated sediment cores, these deposits are overlain by middle to late Holocene sediments with an increasingly marine signature.
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  • 83
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    Nature Publishing Group
    In:  Nature Climate Change, 5 (12). pp. 1107-1113.
    Publication Date: 2017-04-11
    Description: Carbon dioxide removal (CDR) from the atmosphere has been proposed as a measure for mitigating global warming and ocean acidification. To assess the extent to which CDR might eliminate the long-term consequences of anthropogenic CO2 emissions in the marine environment, we simulate the effect of two massive CDR interventions with CO2 extraction rates of 5 GtC yr(-1) and 25 GtC yr(-1), respectively, while CO2 emissions follow the extended RCP8.5 pathway. We falsify two hypotheses: the first being that CDR can restore pre-industrial conditions in the ocean by reducing the atmospheric CO2 concentration back to its pre-industrial level, and the second being that high CO2 emissions rates (RCP8.5) followed by CDR have long-term oceanic consequences that are similar to those of low emissions rates (RCP2.6). Focusing on pH, temperature and dissolved oxygen, we find that even after several centuries of CDR deployment, past CO2 emissions would leave a substantial legacy in the marine environment.
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  • 84
    Publication Date: 2016-10-10
    Description: Shipworms or Teredinidae may be dispersed either as adults in floating wooden objects or as pelagic larvae drifting near the sea surface. Five shipworm species, i.e., half of those having an amphi-Atlantic geographical distribution, are known also to have pelagic phytoplanktotrophic larvae which can be carried by ocean currents. From a series of 742 plankton samples taken from throughout the temperate and tropical North Atlantic Ocean, it can be shown that shipworm larvae are not uncommon in the open sea. Teredinid veligers were found in 19% of all samples taken. One species of larvae, identical in all details to that described by Rancurel (1965), is particularly prevalent and is tentatively identified as Teredora malleolus (Turton). A definitive identification will be possible only after the pelagic larvae of the other Atlantic species are known. The larvae of Teredora malleolus are found throughout the North Atlantic Gyre and the adjacent temperate and tropical seas, and from scattered records in the South Equatorial Current. Larvae of other unidentified Teredinidae species were also found. The distance that larvae may be transported depends upon the length of pelagic larval development and the velocity of the currents. From the known current velocities it can be shown that, even in a few weeks, larvae may be dispersed many hundreds of kilometers. The geographical distribution of shipworm larvae suggests that they are carried along the coasts of continents and even across ocean basins, and that this dispersal must be an important factor in the geographical distribution of the adult forms and in the maintenance of genetic continuity between populations otherwise isolated from one another.
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  • 85
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    In:  Environment international, 84 . pp. 115-130.
    Publication Date: 2016-11-10
    Description: In aquatic ecosystems, progesterone (P4) and synthetic progestins (gestagens) originate from excretion by humans and livestock. Synthetic progestins are used for contraception and as P4 for medical treatments as well. Despite significant use, their ecotoxicological implications are poorly understood. Only about 50% of the progestins in use have been analyzed for their environmental occurrence and effects in aquatic organisms. Here we critically summarize concentrations and effects of progestins in aquatic systems. P4 and progestins were mostly detected when analyzed for, and they occurred in the low ng/L range in wastewater and surface water. In animal farm waste and runoff, they reached up to several μg/L. P4 and synthetic progestins act through progesterone receptors but they also interact with other steroid hormone receptors. They act on the hypothalamus– pituitary–gonad axis, lead to oocyte maturation in female and sperm motility in male fish. Additionally, other pathways are affected as well, including the circadian rhythm. Effects of P4, mifepristone and eleven synthetic progestins have been studied in fish and a few compounds in frogs and mussels. Environmental risks may be associated with P4, dydrogesterone and medroxyprogesterone acetate, where transcriptional effects were found at highest environmental levels. Reproductive effects occurred at higher levels. However, norethindrone, levonorgestrel and norgestrel compromised reproduction at environmental (ng/L) concentrations. Thus, some of the progestins are very active endocrine disrupters. This review summarizes the current state of the art and highlights risks for fish. Further research is needed into environmental concentrations and effects of non-investigated progestins, unexplored modes of action, and the activity of mixtures of progestins and other steroids to fully assess their environmental risks.
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  • 86
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    Nature Publishing Group
    In:  Nature Reviews Drug Discovery, 14 (2). pp. 111-129.
    Publication Date: 2020-06-23
    Description: Natural products have been a rich source of compounds for drug discovery. However, their use has diminished in the past two decades, in part because of technical barriers to screening natural products in high-throughput assays against molecular targets. Here, we review strategies for natural product screening that harness the recent technical advances that have reduced these barriers. We also assess the use of genomic and metabolomic approaches to augment traditional methods of studying natural products, and highlight recent examples of natural products in antimicrobial drug discovery and as inhibitors of protein–protein interactions. The growing appreciation of functional assays and phenotypic screens may further contribute to a revival of interest in natural products for drug discovery.
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  • 87
    Publication Date: 2020-06-25
    Description: Crossover recombination reshuffies genes and prevents errors in segregation tha't Iead to extra or missing chromosomes (aneuploidy) in human eggs, a major cause of pregnancy failure and congenital disorders. Here we generate genome-wide maps of cro~sovers and chromosome segregation patterns by recovering all three products of single female meioses. Genotyping 〉4 millioninformative SNPs from 23 complete meioses allowed us to map 2,032 maternal and 1,342 paternal crossovers and to infer the segregation patterns of 529 chromosome pairs. We uncover a new reverse chromosome segregation pattern in which both homologsseparate their sister chromatids at meiosis I; detect selection for higher recombination rates in the female germ line by the elimination of aneuploid embryos; and report chromosomal drive against non recombinant chromatids at meiosis II. Collectively, our findings show !hat recombination not only affects homolog segregation at meiosis I but also the fate of sister chromatids at meiosis II.
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  • 88
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    In:  Paläontologische Zeitschrift, 89 (3). pp. 287-302.
    Publication Date: 2017-04-12
    Description: The faunal composition and diversity pattern of Recent benthic foraminifera from the shelf and slope of the South Western Approaches (Celtic Sea) were assessed. The sampling stations cover a depth range from 100 to 500 m. A total number of 294 species was recorded, of which 89 were found exclusively in the living fauna and 118 only in the dead assemblage, whereas 87 species were found in both assemblages. The faunal composition revealed a distinct bisection of the living fauna on the shelf. While certain distribution patterns of living dominant species were recognized along a NE-SW trending transect towards the shelf edge, the living fauna changed within small depth intervals and geographic position on the slope. Causes for this structured slope assemblages were probably along-slope currents of varying strengths, as well as variations in topography and bottom sediments. Analyses of population densities and diversity patterns determined high densities along the shelf edge and at one slope station, as well as an increasing diversity with water depth. A comparison with literature data from the same area yields distinct differences in faunal composition on the shelf and slope. The diversity was similar on the shelf, but higher at corresponding stations on the slope. We conclude that the faunal composition was highly influenced by the time and methods of sampling. In order to obtain consistent results in regional studies, all samples should be taken in a short time interval and by using the same sampling device. In addition, we depicted the influences of environmental parameters on dead faunal assemblages and their consequences for paleoenvironmental interpretations of fossil foraminiferal assemblages.
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  • 89
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    In:  In: The Red Sea: The Formation, Morphology, Oceanography and Environment of a Young Ocean Basin. , ed. by Rasul, N. and Stewart, I. C. F. Springer Earth System Sciences . Springer, Berlin, pp. 219-233. ISBN 978-3-662-45200-4
    Publication Date: 2015-12-10
    Description: The major geochemical characteristics of Red Sea brine are summarized for 11 brine-filled deeps located along the central graben axis between 19°N and 27°N. The major element composition of the different brine pools is mainly controlled by variable mixing situations of halite-saturated solution (evaporite dissolution) with Red Sea deep water. The brine chemistry is also influenced by hydrothermal water/rock interaction, whereas magmatic and sedimentary rock reactions can be distinguished by boron, lithium, and magnesium/calcium chemistry. Moreover, hydrocarbon chemistry (concentrations and δ13C data) of brine indicates variable injection of light hydrocarbons from organic source rocks and strong secondary (bacterial or thermogenic) degradation processes. A simple statistical cluster analysis approach was selected to look for similarities in brine chemistry and to classify the various brine pools, as the measured chemical brine compositions show remarkably strong concentration variations for some elements. The cluster analysis indicates two main classes of brine. Type I brine chemistry (Oceanographer and Kebrit Deeps) is controlled by evaporite dissolution and contributions from sediment alteration. The Type II brine (Suakin, Port Sudan, Erba, Albatross, Discovery, Atlantis II, Nereus, Shaban, and Conrad Deeps) is influenced by variable contributions from volcanic/magmatic rock alteration. The chemical brine classification can be correlated with the sedimentary and tectonic setting of the related depressions. Type I brine-filled deeps are located slightly off-axis from the central Red Sea graben. A typical “collapse structure formation” which has been defined for the Kebrit Deep by evaluating seismic and geomorphological data probably corresponds to our Type I brine. Type II brine located in depressions in the northern Red Sea (i.e., Conrad and Shaban Deeps) could be correlated to “volcanic intrusion-/extrusion-related” deep formation. The chemical indications for hydrothermal influence on Conrad and Shaban Deep brine can be related to brines from the multi-deeps region in the central Red Sea, where volcanic/magmatic fluid/rock interaction is most obvious. The strongest hydrothermal influence is observed in Atlantis II brine (central multi-deeps region), which is also the hottest Red Sea brine body in 2011 (~68.2 °C).
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  • 90
    Publication Date: 2017-04-13
    Description: Concern about climate change has re-ignited interest in universal ecological responses to temperature variations: (1) biogeographical shifts, (2) phenology changes, and (3) size shifts. In this study we used copepods as model organisms to study size responses to temperature because of their central role in the pelagic food web and because of the ontogenetic length constancy between molts, which facilitates the definition of size of distinct developmental stages. In order to test the expected temperature-induced shifts towards smaller body size and lower abundances under warming conditions, a mesocosm experiment using plankton from the Baltic Sea at three temperature levels (ambient, ambient +4 °C, ambient −4 °C) was performed in summer 2010. Overall copepod and copepodit abundances, copepod size at all life stages, and adult copepod size in particular, showed significant temperature effects. As expected, zooplankton peak abundance was lower in warm than in ambient treatments. Copepod size-at-immature stage significantly increased in cold treatments, while adult size significantly decreased in warm treatments.
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  • 91
    Publication Date: 2015-12-16
    Description: Invasion of non-indigenous species (NIS) is acknowledged as one of the most important external drivers affecting structure and functions of marine ecosystems globally. This paper offers literature-based analysis on the effects of the widespread (occurring in at least 50% of countries) and currently established NIS on ecosystem features in the Baltic Sea. It appears that out of the 18 NIS taxa studied, there are no published records on 28% of NIS for any of the seven impact categories investigated. When ecological impacts are known, laboratory experimental evidence dominates over field studies. Combined observations on impact strength, information type and confidence level suggest that the two benthic invertebrates, the polychaete Marenzelleria spp. and the zebra mussel Dreissena polymorpha (Pallas 1771) exert the highest ecosystem impact. Despite continuously accumulating information on the NIS effects, however, the confidence of findings is still low. Thus, we still understand very little on both the direction and magnitude of the effects of even the most widespread NIS on the structure and dynamics of the Baltic Sea ecosystems. In order to increase reliability of such assessments, future research should be targeted towards spatially-explicit field surveys and experimenting of multitrophic systems, together with modelling of ecosystem impact.
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  • 92
    Publication Date: 2020-10-21
    Description: Large Arctic rivers discharge significant amounts of dissolved organic matter (DOM) into the Arctic Ocean. We sampled natural waters of the Lena River, the Buor-Khaya Bay (Laptev Sea), permafrost melt water creeks, ice complex melt water creeks and a lake. The goal of this study was to characterize the molecular DOM composition with respect to different water bodies within the Lena Delta. We aimed at an identification of source-specific DOM molecular markers and their relative contribution to DOM of different origin. The molecular characterization was performed for solid-phase extracted DOM by Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS). Average dissolved organic carbon concentrations in the original samples were 490 ± 75 µmol C L−1 for riverine and bay samples and 399 ± 115 µmol C L−1 for permafrost melt water creeks. Average TDN concentrations were elevated in the permafrost melt waters (19.7 ± 7.1 µmol N L−1) in comparison to the river and the bay (both 13.2 ± 2.6 µmol N L−1). FT-ICR MS and statistical tools demonstrated that the origin of DOM in the Lena Delta was systematically reflected in its molecular composition. Magnitude weighted parameters calculated from MS data (O/Cwa, H/Cwa, C/Nwa) highlighted preliminary sample discrimination. The highest H/Cwa of 1.315 was found for DOM in melt water creeks in comparison to 1.281 for river and 1.230 for the bay samples. In the bay samples we observed a higher fraction of oxygen-rich components which was reflected in an O/Cwa ratio of 0.445 in comparison to 0.425 and 0.427 in the river and creeks, respectively. From the southernmost location to the bay a relative depletion of nitrogenous molecular markers and an enrichment of oxidized DOM components occurred. The highest contribution of nitrogenous components was indicative for creeks reflected in a C/Nwa of 104 in comparison to 143 and 176 in the river and bay, respectively. These observations were studied on a molecular formula level using principal component and indicator value analyses. The results showed systematic differences with respect to water origin and constitute an important basis for a better mechanistic understanding of DOM transformations in the changing Arctic rivers.
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  • 93
    Publication Date: 2019-09-23
    Description: Global-scale studies of marine food webs are rare, despite their necessity for examining and understanding ecosystem level effects of climate variability. Here we review the progress of an international collaboration that compiled regional diet datasets of multiple top predator fishes from the Indian, Pacific and Atlantic Oceans and developed new statistical methods that can be used to obtain a comprehensive ocean-scale understanding of food webs and climate impacts on marine top predators. We loosely define top predators not as species at the apex of the food web, but rather a guild of large predators near the top of the food web. Specifically, we present a framework for world-wide compilation and analysis of global stomach-contents and stable-isotope data of tunas and other large pelagic predatory fishes. To illustrate the utility of the statistical methods, we show an example using yellowfin tuna in a “test” area in the Pacific Ocean. Stomach-contents data were analyzed using a modified (bagged) classification tree approach, which is being prepared as an R statistical software package. Bulk δ15N values of yellowfin tuna muscle tissue were examined using a Generalized Additive Model, after adjusting for spatial differences in the δ15N values of the baseline primary producers predicted by a global coupled ocean circulation-biogeochemical-isotope model. Both techniques in tandem demonstrated the capacity of this approach to elucidate spatial patterns of variations in both forage species and predator trophic positions and have the potential to predict responses to climate change. We believe this methodology could be extended to all marine top predators. Our results emphasize the necessity for quantitative investigations of global-scale datasets when evaluating changes to the food webs underpinning top ocean predators under long-term climatic variability.
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  • 94
    Publication Date: 2017-04-13
    Description: Two new oxaphenalenone dimers, talaromycesone A (1) and talaromycesone B (2), and a new isopentenyl xanthenone, talaroxanthenone (3), together with six known diphenyl ether derivatives, e.g., Δ1′,3′,-1′-dehydroxypenicillide (4), 1′,2′-dehydropenicillide (5), vermixocin A (6), vermixocin B (7), 3′-methoxy-1′2′-dehydropenicillide (8), and AS-186c (9), were isolated from the culture broth and mycelia of a marine fungus Talaromyces sp. strain LF458. Compound 2 represents the first example of 1-nor oxaphenalenone dimer carbon skeleton. All isolated compounds were subjected to bioactivity assays. Compounds 1, 2, and 9 exhibited potent antibacterial activities with IC50 3.70, 17.36, and 1.34 μM, respectively, against human pathogenic Staphylococcus strains. Compounds 1, 3, and 9 displayed potent acetylcholinesterase inhibitory activities with IC50 7.49, 1.61, and 2.60 μM, respectively. Interestingly, phosphodiesterase PDE-4B2 was inhibited by compounds 3 (IC50 7.25 μM) and 9 (IC50 2.63 μM).
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  • 95
    Publication Date: 2017-04-13
    Description: Tropical influence on the austral summer Southern Annular Mode (SAM) over the ERA-40 period 1960/1961–2001/2002 is investigated using (1) a partially coupled climate model (PCM) driven by observed wind stress and (2) a version of the ECMWF atmospheric model by means of a relaxation technique. We show that the tropical influence in the PCM is dominated by El Niño Southern Oscillation (ENSO) whereas the relaxation experiments suggest an additional influence independent of ENSO. In the observations, we find that the simultaneous influence of ENSO on the summer SAM was much stronger after 1979 than before, with the consequence that the ensemble mean of the PCM captures around 50 % of the interannual variance of the SAM after 1979 and less than 10 % before. Nevertheless, in the ensemble mean of the PCM, the relationship between ENSO and the summer SAM is stable throughout the whole period 1960/1961–2001/2002, and it is the individual ensemble members that exhibit a non-stationary relationship like that found in the observations. It follows that variability not related to the observed wind forcing used to drive the PCM is important for obscuring the ENSO/SAM relationship. The experiments using relaxation show that tropical forcing was important for both the interannual variability and the trend of the summer SAM, even before 1979. Adding the observed extratropical sea surface temperature and sea-ice (SSTSI) to the tropical relaxation runs improves the model performance, indicative of a positive feedback from extratropical SSTSI onto the SAM.
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  • 96
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    In:  The ISME Journal, 9 (3). pp. 696-707.
    Publication Date: 2019-01-17
    Description: Thiomicrospira species are ubiquitously found in various marine environments and appear particularly common in hydrothermal vent systems. Members of this lineage are commonly classified as sulfur-oxidizing chemolithoautotrophs. Although sequencing of Thiomicrospira crunogena's genome has revealed genes that encode enzymes for hydrogen uptake activity and for hydrogenase maturation and assembly, hydrogen uptake ability has so far not been reported for any Thiomicrospira species. We isolated a Thiomicrospira species (SP-41) from a deep sea hydrothermal vent and demonstrated that it can oxidize hydrogen. We show in vivo hydrogen consumption, hydrogen uptake activity in partially purified protein extracts and transcript abundance of hydrogenases during different growth stages. The ability of this strain to oxidize hydrogen opens up new perspectives with respect to the physiology of Thiomicrospira species that have been detected in hydrothermal vents and that have so far been exclusively associated with sulfur oxidation.
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  • 97
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    Nature Publishing Group
    In:  Nature, 522 (7554). pp. 36-37.
    Publication Date: 2019-03-05
    Description: The identification of an exchange of nutrients and signalling molecules between a planktonic alga and a bacterium demonstrates that targeted mutualistic interactions occur across domains of life in the oceans. See Letter p.98
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  • 98
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    In:  In: Hb25_Springer Handbook of Marine Biotechnology. , ed. by Se-Kwon, K. Springer handbooks . Springer, Berlin, pp. 1015-1042. ISBN 978-3-642-53970-1
    Publication Date: 2019-12-10
    Description: The application of marine resources for the formulation of cosmetics has been known for centuries. Marine organisms produce unique compounds, which are not found in terrestrial sources, to provide protection against hard environmental conditions. They have been used both to confer: Physicochemical functional properties to the cosmetic product, such as texture, emulsifying properties or color, Bioactive properties, including remineralizing, emollient, hydrating, antioxidant, sunscreening among others. In this chapter, the major functional and biological activities of components isolated from marines sources, including micro and macroorganisms and with special emphasis on algae, are reviewed in relation to their application to cosmetics. Both the traditionally used compounds and fractions and those isolated and characterized in recent years are presented.
    Type: Book chapter , NonPeerReviewed
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  • 99
    Publication Date: 2019-03-05
    Description: Particles in aquatic environments host distinct communities of microbes, yet the evolution of particlespecialized taxa and the extent to which specialized microbial metabolism is associated with particles is largely unexplored. Here, we investigate the hypothesis that a widely distributed and uncultivated microbial group - the marine group II euryarchaea (MGII) - interacts with living and detrital particulate organic matter (POM) in the euphotic zone of the central California Current System. Using fluorescent in situ hybridization, we verified the association of euryarchaea with POM. We further quantified the abundance and distribution of MGII 16S ribosomal RNA genes in size-fractionated seawater samples and compared MGII functional capacity in metagenomes from the same fractions. The abundance of MGII in free-living and 〈3 μm fractions decreased with increasing distance from the coast, whereas MGII abundance in the 0.8-3 lm fraction remained constant. At several offshore sites, MGII abundance was highest in particle fractions, indicating that particle-attached MGII can outnumber free-living MGII under oligotrophic conditions. Compared with free-living MGII, the genome content of MGII in particleassociated fractions exhibits an increased capacity for surface adhesion, transcriptional regulation and catabolism of high molecular weight substrates. Moreover, MGII populations in POM fractions are phylogenetically distinct from and more diverse than free-living MGII. Eukaryotic phytoplankton additions stimulated MGII growth in bottle incubations, providing the first MGII net growth rate measurements. These ranged from 0.47 to 0.54 d-1. However, MGII were not recovered in wholegenome amplifications of flow-sorted picoeukaryotic phytoplankton and heterotrophic nanoflagellates, suggesting that MGII in particle fractions are not physically attached to living POM. Collectively, our results support a linkage between MGII ecophysiology and POM, implying that marine archaea have a role in elemental cycling through interactions with particles. © 2015 International Society for Microbial Ecology. All rights reserved.
    Type: Article , PeerReviewed
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  • 100
    Publication Date: 2019-03-05
    Description: Algae with secondary plastids of a red algal origin, such as ochrophytes (photosynthetic stramenopiles), are diverse and ecologically important, yet their evolutionary history remains controversial. We sequenced plastid genomes of two ochrophytes, Ochromonas sp. CCMP1393 (Chrysophyceae) and Trachydiscus minutus (Eustigmatophyceae). A shared split of the clpC gene as well as phylogenomic analyses of concatenated protein sequences demonstrated that chrysophytes and eustigmatophytes form a clade, the Limnista, exhibiting an unexpectedly elevated rate of plastid gene evolution. Our analyses also indicate that the root of the ochrophyte phylogeny falls between the recently redefined Khakista and Phaeista assemblages. Taking advantage of the expanded sampling of plastid genome sequences, we revisited the phylogenetic position of the plastid of Vitrella brassicaformis, a member of Alveolata with the least derived plastid genome known for the whole group. The results varied depending on the dataset and phylogenetic method employed, but suggested that the Vitrella plastids emerged from a deep ochrophyte lineage rather than being derived vertically from a hypothetical plastid-bearing common ancestor of alveolates and stramenopiles. Thus, we hypothesize that the plastid in Vitrella, and potentially in other alveolates, may have been acquired by an endosymbiosis of an early ochrophyte.
    Type: Article , PeerReviewed
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