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  • evolution  (113)
  • Springer  (113)
  • American Meteorological Society
  • 1995-1999  (44)
  • 1990-1994  (69)
  • 1940-1944
  • 1998  (44)
  • 1992  (41)
  • 1990  (28)
  • 1941
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  • 1995-1999  (44)
  • 1990-1994  (69)
  • 1940-1944
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  • 1
    Electronic Resource
    Electronic Resource
    Are the oviposition traits of the South India strain of Callosobruchus maculatus maintained by natural selection? (1990)
    Springer
    Entomologia experimentalis et applicata 57 (1990), S. 143-150 
    Details
    ISSN: 1570-7458
    Keywords: Bruchidae ; Callosobruchus maculatus ; competition ; development ; evolution ; fecundity ; growth rates ; host preferences ; life tables ; mortality ; natural selection ; net reproductive rate ; oviposition traits
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Description / Table of Contents: Résumé Le taux partiel de reproduction nette (R inf0 sup* ) dépend de l'espèce de la plante sur laquelle les œufs sont pondus et du nombre de larves entrant dans la graine. La survie larvaire est réduite par 1/(le nombre de larves par graine) parce qu'une seule larve se développe dans une graine. La fécondité n'est pas modifiée par la compétition subie par les larves, la mortalité larvaire a l'effet le plus important sur R inf0 sup* . Les femelles éliminent ou réduisent la compétition larvaire en dispersant leurs œufs uniformément et font si peu d'erreurs avec une hyperdispersion que l'évolution d'un comportement plus précis n'accroîtrait R inf0 sup* que de 4% au maximum. Des femelles retournant à une distribution des œufs au hasard provoqueraient une réduction de R inf0 sup* de 25% au moins. Les légumineuses généralement cultivées dans l'Inde du Sud sont des hôtes acceptables quand elles sont présentées seules. Le choix des femelles entre 2 hôtes élève R inf0 sup* de 30% ou plus par rapport à une distribution au hasard. Les préférences les plus nettes concernent des combinaisons présentant la plus grande différence de R inf0 sup* . Les femelles qui hyperdispersent leurs œufs, choisissent leurs hôtes et évitent les pertes par compétition en empêchant que les œufs ne donnent plus de descendants que ne le ferait une ponte au hasard. Les particularités de la ponte sont variables et héritables. Les lignées se sélectionnent bien, en fonction de la dispersion de leurs œufs sur les graines, de la discrimination des plantes hôtes, et de la modulation de leur taux de ponte. La sélection naturelle maintient ces particularités du comportement d'une façon sédentaire.
    Notes: Abstract The deposition of eggs by this strain of Callosobruchus maculatus (Fab.) (Bruchidae: Coleoptera) departs from randomness in three ways; eggs are uniformly dispersed, oviposition rates drop when beans begin to carry 2 or more eggs, and there are sharp host preferences. Using random egg placement for the unspecialized condition, these traits are evaluated for their effect on a female's contributions of offspring to the next generation (R0, the net reproductive rate). The major increases in R0 result from females dispersing eggs so uniformly that larval competition is either reduced or eliminated. Females reduce their oviposition rate when the larva from an egg added to a bean is almost certain to die in competitive encounters. Host preferences and larval survival in a host are positively associated with the abundance of the host in South India. The three oviposition traits act together to give and R0 that is 25–50% than that of eggs placed at random. These traits are known to be variable and heritable, hence, the conditions necessary for natural selection are statisfied.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF00343502
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  • 2
    Electronic Resource
    Electronic Resource
    Respective Role of the Axialand Appendicular Systems in Relation to the Transition to Limblessness (1998)
    Springer
    Acta biotheoretica 46 (1998), S. 141-156 
    Details
    ISSN: 1572-8358
    Keywords: locomotion ; Squamata ; lizards ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract In lower quadrupedal vertebrates locomotor efficiency seems to result from the associate movements of the axial and appendicular systems, which are totally independent in structure and embryological origin. The curvature of the trunk, produced by a standing wave, magnifies the propulsive action of the limbs. In intermediate forms, the association of an elongate trunk with limbs reduced in size brings about functional consequences which may be noticeably diverse according to the degree of trunk elongation and limb reduction. According to environmental constraints, animals search for better locomotor efficiency, which implies the maintenance or breakage of this association of both locomotor systems. In some cases, limb action on the ground is added to the axial wave action through a perfect mutual adjustment of rhythmic activity, until mechanical inefficiency of the limbs is reached by possible loss of contact with the ground. In other cases, the limbs dragged on the ground during the stance phase act against the axial action or, on the contrary, are inhibited by the axial system. A review of available data tries to contribute to an understanding of the respective roles of both systems in the transition to limblessness.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1023/A:1001129920394
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  • 3
    Electronic Resource
    Electronic Resource
    Eucaryotic codes (1990)
    Springer
    Cellular and molecular life sciences 46 (1990), S. 1106-1117 
    Details
    ISSN: 1420-9071
    Keywords: Genetic code ; eucaryotic cell ; evolution ; code ambiguity ; code universality ; convergence
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Summary This article is a review of the rules used by eucaryotic cells to translate a nuclear messenger RNA into a polypeptide chain. The recent observation that these rules are not identical in two species of a same phylum indicates that they have changed during the course of evolution. Possible scenarios for such changes are presented.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF01936920
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  • 4
    Electronic Resource
    Electronic Resource
    Presence of a partial urea cycle in the leech,Poecilobdella granulosa (1992)
    Springer
    Cellular and molecular life sciences 48 (1992), S. 729-731 
    Details
    ISSN: 1420-9071
    Keywords: Urea cycle ; leech ; botryoidal tissue ; hirudineans ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Abstract Ornithine carbamoyltransferase (OCT) and arginase, but not arginine synthetase (AS), were detected in the body wall and gut tissues of the leech. The activities of these enzymes were not altered by starvation. The high activity of arginase in body wall is probably due to the association of the latter with botryoidal tissue. Hirudineans, which evolved from oligochaete ancestors, appear to have lost the citrulline-arginine segment of the urea cycle due to their ammonotelic mode of nitrogen excretion.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF02124288
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  • 5
    Electronic Resource
    Electronic Resource
    Classification and evolution of EF-hand proteins (1998)
    Springer
    BioMetals 11 (1998), S. 277-295 
    Details
    ISSN: 1572-8773
    Keywords: evolution ; classification ; EF-hand ; domain ; homology ; chimera ; congruence ; gene duplication ; gene fusion ; eukaryote ; dendrogram ; calmodulin ; troponin C ; light chain of myosin ; S100 ; parvalbumin ; calcineurin ; recoverin ; calpain ; sorcin ; diacylglycerol ; calbindin ; aequorin ; phospholipase C ; BM-40
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Abstract Forty-five distinct subfamilies of EF-hand proteins have been identified. They contain from two to eight EF-hands that are recognizable by amino acid sequence as being statistically similar to other EF-hand domains. All proteins within one subfamily are congruent to one another, i.e. the dendrogram computed from one of the EF-hand domains is similar, within statistical error, to the dendrogram computed from another(s) domain. Thirteen subfamilies - including Calmodulin, Troponin C, Essential light chain, Regulatory light chain - referred to collectively as CTER, are congruent with one another. They appear to have evolved from a single ur-domain by two cycles of gene duplication and fusion. The subfamilies of CTER subsequently evolved by gene duplications and speciations. The remaining 32 subfamilies do not show such general patterns of congruence; however, some - such as S100, intestinal calcium binding protein (calbindin 9kd), and trichohylin - do not form congruent clusters of subfamilies. Nearly all of the domains 1, 3, 5, and 7 are most similar to other ODD domains. Correspondingly the EVEN numbered domains of all 45 subfamilies most closely resemble EVEN domains of other subfamilies. Many sequence and chem-ical characteristics do not show systemic trends by subfamily or species of host organisms; such homoplasy is widespread. Eighteen of the subfamilies are heterochimeric; in addition to multiple EF-hands they contain domains of other evolutionary origins.© Kluwer Academic Publishers
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1023/A:1009282307967
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  • 6
    Electronic Resource
    Electronic Resource
    Basic rules of change (1990)
    Springer
    Journal for general philosophy of science 21 (1990), S. 231-257 
    Details
    ISSN: 1572-8587
    Keywords: basic rules ; change ; discipline-neutral ; evolution ; analogy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Philosophy , Nature of Science, Research, Systems of Higher Education, Museum Science
    Notes: Summary A small step is made in the direction of defining some general basic rules which can serve as a framework for research in several fields of the social sciences. The method of working with analogies asks for a more accurate approach. Starting from the concept of evolution in the form of a basic rule another basic rule is formulated. This rule shows what are the most important factors in long term developments and what types of development one can expect.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF01801037
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  • 7
    Electronic Resource
    Electronic Resource
    Life and teleology (1992)
    Springer
    Journal for general philosophy of science 23 (1992), S. 85-103 
    Details
    ISSN: 1572-8587
    Keywords: life ; teleology ; evolution ; reality ; representation ; experience
    Source: Springer Online Journal Archives 1860-2000
    Topics: Philosophy , Nature of Science, Research, Systems of Higher Education, Museum Science
    Notes: Summary A comprehensive definition of the phenomenon called “life” led to the addition of many dimensions to the natural sciences, and especially the conscious mental dimension. Historical attention is paid not only to those employing the natural philosophical paradigms, but also to evolutionary theories and to the Kantian teleological philosophy. The belief that science can solve the riddle of life is a category of purposal thinking. A revised version of critical teleology is essential for comprehension of life.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF01801797
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  • 8
    Electronic Resource
    Electronic Resource
    Evolutionary genetics of the aphid Cryptomyzus, with a preliminary analysis of the inheritance of host plant preference, reproductive performance and host-alteration (1990)
    Springer
    Entomologia experimentalis et applicata 57 (1990), S. 65-76 
    Details
    ISSN: 1570-7458
    Keywords: Cryptomyzus ; aphid ; hybridization ; host plant preference ; reproductive performance ; host-alternation ; speciation ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Description / Table of Contents: Résumé C. galeopsidis Kaltenbach contient plusieurs formes qui ont différentes relations avec des plantes hôtes et des cycles distincts. Des croisements ont permis d'élucider la taxonomie de ces formes et d'étudier l'hérédité de préférences d'hôtes, des performances reproductives et de l'alternance d'hôtes. Une des formes apparaît comme une espèce distincte par suite de la valeur adaptative réduite des hybrides. Les autres formes avec alternance ou non des hôtes sont considérées comme conspécifiques et représentant deux stratégies vitales différentes. Les performances reproductives sont probablement polygéniques puisque les hybrides ont des performances intermédiaires. Les préférences d'hôtes des hybrides montrent certains degrés de dominance et semblent déterminées par quelques gènes seulement. L'alternance des hôtes est envisagée comme ayant une hérédité monofactorielle. Les conséquences sur la spéciation sont discutées.
    Notes: Abstract The aphid species Cryptomyzus galeopsidis (Kaltenbach) includes several distinct forms which have different host plant relationships and life cycles. Cross breeding was used to elucidate the taxonomic status of these forms and to investigate the inheritance of host preference, reproductive performance and host-alternation. One of the forms appeared to be a distinct species because of the reduced fitness of the hybrids. Other host-alternating and non host-alternating forms are considered conspecific and represent two life cycle strategies. Reproductive performance is probably controlled polygenically, since hybrids show an intermediate performance. Host preference in hybrids showed some degree of dominance and seemed to be determined by only a few genes. Host-alternation is presumed to be inherited monofactorially. The implications for speciation are discussed.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF00349596
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  • 9
    Electronic Resource
    Electronic Resource
    Metabolic pathways inParacoccus denitrificans and closely related bacteria in relation to the phylogeny of prokaryotes (1992)
    Springer
    Antonie van Leeuwenhoek 61 (1992), S. 1-33 
    Details
    ISSN: 1572-9699
    Keywords: Paracoccus denitrificans ; denitrification ; methylotrophy ; cytochromec ; cytochrome oxidase ; phylogeny ; evolution ; lateral gene transfer ; nitrogen fixation ; Thiosphaera pantotropha
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Denitrification and methylotrophy inParacoccus denitrificans are discussed. The properties of the enzymes of denitrification: the nitrate-nitrite antiporter, nitrate reductase, nitrite reductase, nitric oxide reductase and nitrous oxide reductase are described. The genes for none of these proteins have yet been cloned and sequenced fromP. denitrificans. A number of sequences are available for enzymes fromEscherichia coli, Pseudomonas stutzeri andPseudomonas aeruginosa. It is concluded that pathway specificc-type cytochromes are involved in denitrification. At least 40 genes are involved in denitrification. In methanol oxidation at least 20 genes are involved. In this case too pathway specificc-type cytochromes are involved. The sequence homology between the quinoproteins methanol dehydrogenase, alcoholdehydrogenase and glucose dehydrogenase is discussed. This superfamily of proteins is believed to be derived from a common ancestor. ThemoxFJGI operon determines the structural components of methanol dehydrogenase and the associatedc-type cytochrome. Upstream of this operon 3 regulatory proteins were found. The mox Y protein shows the general features of a sensor protein and the moxX protein those of a regulatory protein. Thus a two component regulatory system is involved in both denitrification and methylotrophy. The phylogeny of prokaryotes based on 16S rRNA sequence is discussed. It is remarkable that the 16S rRNA ofThiosphaera pantotropha is identical to that ofP. denitrificans. Still these bacteria show a number of differences.T. pantotropha is able to denitrify under aerobic circumstances and it shows heterotrophic nitrification. Nitrification and heterotrophic nitrification are found in species belonging to the β-and γ-subdivisions of purple non-sulfur bacteria. Thus the occurrence of heterotrophic nitrification inT. pantotropha which belongs to the α-subdivision of purple non-sulfur bacteria is a remarkable property. FurthermoreT. pantotropha contains two nitrate reductases of which the periplasmic one is supposed to be involved in aerobic denitrification. The nitrite reductase is of the Cu-type and not of the cytochromecd 1 type as inP. denitrificans. Also the cytochromeb of theQbc complex ofT. pantotropha is highly similar to its counterpart inP. denitrificans. It is hypothesized that the differences between these two organisms which both contain large megaplasmids is due to a combination of loss of genetic information and plasmid-coded properties. The distribution of a number of complex metabolic systems in eubacteria and in a number of species belonging to the α-group of purple non sulphur bacteria is reviewed. Two possibilities to explain this haphazard distribution are considered: 1. Lateral gene transfer between distantly related micro organisms occurs frequently. 2. The eubacterial ancestors must have possessed already these properties. The distribution of these properties is due to sporadic loss during evolutionary divergence. With respect to the occurrence and frequency of lateral gene transfer two opposing views exist. According to molecular biologists lateral gene transfer occurs frequently and is very easy. Bacteria are supposed to form one large gene pool. On the other hand population geneticists have provided evidence that strong systems operate that establish reproductive isolation between diverged species and even between closely related cell lines. Data on amino acid sequences of nitrogenase proteins, cytochromesc, cytochrome oxidases, β-subunits of ATP synthase and tryptophan biosynthetic enzymes of various micro organisms were reviewed. In all these cases phylogenetic trees could be constructed based on the amino acid sequence data. In all cases this phylogenetic tree was similar to the one based on 16S rRNA homology. Only in one case evidence for the occurrence of lateral gene transfer was obtained. Therefore it is concluded that lateral gene transfer played a minor role in the distribution of complex metabolic systems among prokaryotes. It must be stressed that this does not exclude the possibility that lateral gene transfer occurred frequently in the initial stage of bacterial evolution. It is hypothesized that the appearance of nitrogen fixation, denitrification and cytochrome oxidase formation were early events in the evolution of micro organisms. Both systems are supposed to have evolved only once. Subsequently the capacity to fix nitrogen or to denitrifymust have been lost many times, just as photosynthetic capacity is supposed to have been lost many times. During evolution many systems have been lost leading to a haphazard distribution of metabolic characters among bacteria. As an example it is suggested that organisms with a respiratory chain similar to that ofEscherichia coli arose by loss of the capacity to form the Qbc complex andc-type cytochromes. The remaining systems could be controlled much better however than in the ancestral organisms.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF00572119
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  • 10
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    Development of non-reproductive castes in the neotropical termite generaCornitermes, Embiratermes andRhynchotermes (Isoptera, Nasutitermitinae) (1992)
    Springer
    Insectes sociaux 39 (1992), S. 313-324 
    Details
    ISSN: 1420-9098
    Keywords: Isoptera ; Termitidae ; Nasutitermitinae ; caste differentiation ; phylogeny ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary The developmental pattern of the neuter castes was studied in the mandibulate nasute generaCornitermes, Embiratermes andRhynchotermes. InCornitermes walkeri, all the workers and soldiers are male. There are two larval and a single worker instar. Workers can molt into presoldiers. InEmbiratermes chagresi andRhynchotermes perarmatus, both sexes are present among the neuters. A slight sexual dimorphism (males 〉 females) is discernible among both larval instars and among workers ofE. chagresi; female workers can molt into presoldiers. InR. perarmatus, the sexual dimorphism is conspicuous from the first larval instar on. Male larvae go through two instars, then give rise to workers, which do not molt. InR. perarmatus, there is no worker stage in females, but a third larval instar, preceding the presoldier. Hypotheses are proposed as to the evolution of these caste patterns, attempting to conciliate present knowledge of Nasutitermitinae phylogeny and known evolutionary trends affecting termite caste patterns, according to the species' ecology.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF01323951
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  • 11
    Electronic Resource
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    Social organization in some primitive Australian ants. I.Nothomyrmecia macrops Clark (1992)
    Springer
    Insectes sociaux 39 (1992), S. 425-438 
    Details
    ISSN: 1420-9098
    Keywords: Formicidae ; Nothomyrmecia ; evolution ; sociogram ; ethogram ; recognition
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary Results of laboratory-based ethological studies on twoNothomyrmecia macrops colonies with individually marked workers are reported. Interactive behavioural acts constituted less than 1% of all those recorded, revealing a strong tendency by the ants not to engage in social contact. Very few workers performed queen-directed acts. They stayed near the queen, though seldom in direct contact. Division of labour was otherwise barely apparent, except that some individuals showed a propensity to guard the nest entrance. No exchange of food was observed between workers, workers and queen, or adults and larvae (apart from worker placement of prey items with larvae). A queen fed from aDrosophila carcass retrieved from the nest floor, without assistance from workers. Systematic scanned observations confirmed levels of inactivity higher than previously observed in ants (comprising almost 2/3 of recorded behavioural acts). The time budget for activities directed toward the immature stages was the same in both colonies, and fluctuated during the circadian period. Non-nestmate larvae added to worker groups were more frequently licked than nestmate larvae, but this might not involve the particular recognition of nestmateversus non-nestmate brood. These observations support the hypothesis thatNothomyrmecia is primitively eusocial, and of special significance in myrmecology.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF01240625
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  • 12
    Electronic Resource
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    The genetic code in mitochondria and chloroplasts (1990)
    Springer
    Cellular and molecular life sciences 46 (1990), S. 1117-1126 
    Details
    ISSN: 1420-9071
    Keywords: Genetic code ; mitochondria ; evolution ; organelles
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Summary The universal genetic code is used without changes in chloroplasts and in mitochondria of green plants. Non-plant mitochondria use codes that include changes from the universal code. Chloroplasts use 31 anticodons in translating the code; a number smaller than that used by bacteria, because chloroplasts have eliminated 10 CNN anticodons that are found in bacteria. Green plant mitochondria (mt) obtain some tRNAs from the cytosol, and genes for some other tRNAs have been acquired from chloroplast DNA. The code in non-plant mt differs from the universal code in the following usages found in various organisms: UGA for Trp, AUA for Met, AGR for Ser and stop, AAA for Asn, CUN for Thr, and possibly UAA for Tyr. CGN codons are not used byTorulopsis yeast mt. Non-plant mt, e.g. in vertebrates, may use a minimum of 22 anticodons for complete translation of mRNA sequences. The following possible causes are regarded as contributing to changes in the non-plant mt: directional mutation pressure, genomic economization, changes in charging specificity of tRNAs, loss of release factor RF2, changes in RF1, changes in anticodons, loss of lysidine-forming enzyme system, and disappearance of codons from coding sequences.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF01936921
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  • 13
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    The fractal lung: Universal and species-related scaling patterns (1990)
    Springer
    Cellular and molecular life sciences 46 (1990), S. 251-254 
    Details
    ISSN: 1420-9071
    Keywords: Bronchial tree ; evolution ; fractal ; lung airway ; morphogenesis ; renormalization group theory
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Summary The mammalian lung exhibits features of a fractal tree: heterogeneity, self-similarity and the absence of a characteristic scale. The finite nature of the lung ultimately limits the range over which self-similarity scaling characteristics are applicable. However, generalization based on the scaling features of fractals, provides unique insight into geometric organization of anatomic structures. Furthermore, the mathematical theory of renormalization groups provides a description of the harmonically-modulated inverse power-law scaling observed for bronchial tree dimensions observed in different species. Compared to several mammalian species (dog, rat, hamster), the human lung shows marked differences in the phase of the harmonic modulation for both length and diameter measurements. These inter-species scaling differences suggest that evolutionary factors modify certain universal features of morphogenesis.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF01951755
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  • 14
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    Endogenous synthesis of peptidoglycan in eukaryotic cells; a novel concept involving its essential role in cell division, tumor formation and the biological clock (1992)
    Springer
    Cellular and molecular life sciences 48 (1992), S. 921-931 
    Details
    ISSN: 1420-9071
    Keywords: Biological clock ; cell division cycle ; diaminopimelate ; evolution ; FSu ; lysine ; muramate ; muramyl dipeptide ; peptidoglycan ; sleep muropeptide ; tumor
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Abstract Degradation products of peptidoglycan, the universal bacterial cell wall constituent, were previously found in animal tissues and urine. Reassessment and quantitative analysis of available data lead to an original concept, i.e. that eukaryotic cells synthesize peptidoglycan. We present a model in which this endogenously synthesized peptidoglycan is essential for the processes of eukaryotic cell division and sleep induction in animals. Genes for peptidoglycan metabolism, like those for lysine biosynthesis in plants, are probably inherited from endosymbiotic bacteria, the ancestors of mitochondria and chloroplasts. Corollaries of this concept, i.e. roles for peptidoglycan metabolism in tumor formation and in the biological clock, are supported by abundant evidence. We propose that many interactions between bacteria and eukaryotes are conditioned by their common genetic heritage.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF01919139
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  • 15
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    The Light Green Cells ofLymnaea: A neuroendocrine model system for stimulus-induced expression of multiple peptide genes in a single cell type (1992)
    Springer
    Cellular and molecular life sciences 48 (1992), S. 464-473 
    Details
    ISSN: 1420-9071
    Keywords: Molluscan insulin-related peptides ; schistosomin ; neuropeptide gene family ; generation of neuropeptide diversity ; stimulus-dependent expression ; information-handling capacity ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Abstract We review recent experiments showing that the cerebral neuroendocrine Light Green Cells (LGCs) of the freshwater snail,Lymnaea stagnalis, express a family of distinct though related molluscan insulin-related peptide (MIP) genes. The LGCs are involved in the regulation of a wide range of interrelated life processes associated with growth, (energy) metabolism and reproduction. We consider the mechanism of generation of diversity among MIPs, and present evidence that conditions with distinct effects on growth, metabolism and reproduction also can induce distinct patterns of expression of the MIP and schistosomin genes. The stimulus-dependent expression of multiple neuropeptide genes enormously increases the adaptive potential of a peptidergic neuron. We suggest that this contributes significantly to the information-handling capacity of the brain.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF01928165
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  • 16
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    The origin of life — A task in molecular engineering (1992)
    Springer
    Molecular engineering 1 (1992), S. 377-399 
    Details
    ISSN: 1572-8951
    Keywords: Origin of life ; molecular engineering ; biology ; evolution ; genetic code ; translation machine ; self instruction
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract In attempting to understand how life originated, we search for a detailed sequence of experimentally testable physico-chemical steps in an appropriately structured system. This goal is approached in two stages. First we search for the organizational structure of processes leading to systems with the basic features of living organisms. This is an engineering problem: finding a certain construct by taking care of logical requirements and restrictions from physics. Then we face this construct with the chemical and geophysical reality, and this leads to the view that systems with the essential features of early living organisms evolve following a distinct pathway. Energy supply and the presence of a particular structure in space and time are necessary to induce and drive the processes triggered by stochastic events; but if these particular conditions are given, the broad line of the evolutionary processes is determined by logical requirements and by chemical and geophysical constrains and invariants. The genetic machinery considered to evolve in this manner agrees, in its organizational structure and in many details, with the actual genetic machinery of biosystems. A surprising simplicity and transparency is observed in the logic of the basic processes involved in the origin of life. In the present view, the processes leading to the origin of life begin in a very particular, highly structured, small region where the relevant chemistry can be quite different from overall prebiotic chemistry. Energy-rich compounds are present in ample amounts and a succession of physico-chemical processes, which are per se thermodynamically allowed, takes place. This is in contrast to popular views that the origin of life is connected with fundamental thermodynamic questions related to the problem of getting order out of chaos.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF00176808
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  • 17
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    The evolution of the mammalian Y chromosome (1990)
    Springer
    Behavior genetics 20 (1990), S. 109-126 
    Details
    ISSN: 1573-3297
    Keywords: Y chromosome ; DNA ; mammals ; evolution ; behavior
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Psychology
    Notes: Abstract There is a predominant theory for the evolution of the mammalian Y chromosome. This theory hypothesizes that genes for sex determination and male-specific traits, as well as sequences for X-Y meiotic pairing, are conserved on the mammalian Y chromosome across all lineages and that all other Y chromosomal genes or sequences have been or will be lost in each mammalian lineage. There are effects of mouse Y chromosomal genes on behaviors and other traits that are not male specific. Under the predominant theory, these Y chromosomal genes could be the same as the conserved genes for sex determination or malespecific traits, or they could be genes that have been lost from the Y chromosomes of other mammalian lineages and that will eventually be lost from the Y chromosome of the rodent lineage. Recently, the evolution of the primate and rodent Y chromosomes has been studied at the DNA level. These studies are summarized and reviewed in this article. The findings of these studies are not fully consistent with the predominant theory for the evolution of the mammalian Y chromosome. Also, they imply that there are other possibilities for the phylogenetic history of Y chromosomal genes of mice with effects on behavior. These are that Y chromosomal genes with effects on mouse behaviors or other traits could be conserved genes other than those for sex determination or malespecific traits or that they could be novel genes on the Y chromosome of the rodent orMus lineage.
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    URL: http://dx.doi.org/10.1007/BF01070748
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    Evolution of the glycophorin gene family in the hominoid primates (1990)
    Springer
    Biochemical genetics 28 (1990), S. 209-222 
    Details
    ISSN: 1573-4927
    Keywords: glycophorin A ; glycophorin B ; evolution ; primates ; chimpanzee ; gorilla ; orangutan ; gibbon
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Abstract Analysis of nucleotide sequences of the human glycophorin A (GPA) and glycophorin B (GPB) genes has indicated that the GPA gene most closely resembles the ancestral gene, whereas the GPB gene likely arose from the GPA gene by homologous recombination. To study the evolution of the glycophorin gene family in the hominoid primates, restricted DNA on Southern blots from man, pygmy chimpanzee, common chimpanzee, gorilla, orangutan, and gibbon was probed with cDNA fragments encoding the human GPA and GPB coding and 3′-untranslated regions. This showed the presence in all of the hominoid primates of at least one GPA-like gene. In addition, at least one GPB-like gene was detected in man, both chimpanzee species, and gorilla, strongly suggesting that the event that produced the GPB gene occurred in the common ancestor of man-chimpanzee-gorilla. An unexpected finding in this study was the conservation ofEcoRI restriction sites relative to those of the other four enzymes used; the significance of this observation is unclear, but raises the question of nonrandomness ofEcoRI restriction sites in noncoding regions. Further analysis of the evolution of this multigene family, including nucleotide sequence analysis, will be useful in clarification of the evolutionary relationships of the hominoid primates, in correlation with the structure and function of the glycophorin molecules, and in assessment of the role of evolution in the autogenicity of glycophorin determinants.
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    URL: http://dx.doi.org/10.1007/BF00561338
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    The gene coding for glutamate dehydrogenase inDrosophila melanogaster (1990)
    Springer
    Biochemical genetics 28 (1990), S. 337-346 
    Details
    ISSN: 1573-4927
    Keywords: glutamate dehydrogenase ; Drosophila melanogaster ; gene expression ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Abstract We have isolated theDrosophila melanogaster locus coding forl-glutamate dehydrogenase (EC 1.4.1.3) by virtue of its similarity to the corresponding human gene. There is only one copy of this gene in the fruit fly genome, located on the right arm of chromosome 3 (95D1-4). The transcript includes at least one large intron and matures to a ∼2.4-kb-long polyadenylated RNA whose expression is under developmental control.
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    Multiple restriction fragment length polymorphisms associated with the Vc determinant of the MN blood group-related chimpanzee V-A-B-D system (1990)
    Springer
    Biochemical genetics 28 (1990), S. 223-231 
    Details
    ISSN: 1573-4927
    Keywords: restriction fragment length polymorphisms ; glycophorin A ; glycophorin B ; MN blood group ; V-A-B-D blood group ; Vc antigen ; chimpanzee ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Abstract Twelve restriction fragment length polymorphisms (RFLPs) were detected in common chimpanzee using two restriction enzymes (HindIII andMspI) and four DNA probes to the coding regions of the human glycophorin A (GPA) and glycophorin B (GPB) genes and their 3′-untranslated regions. Seven RFLPs correlated with red cell expression of the Vc determinant of the MN blood group-related V-A-B-D system and five RFLPs correlated with nonexpression of this antigen. Animals heterozygous for theV allele that encodes the Vc determinant had all 12 polymorphic restriction fragments and appeared to show reduced intensity of probe hybridization to these fragments, consistent with the presence of aV and a non-V allele. No RFLPs were detected withEcoRI,SstI, orBamHI, in spite of the relatively large segment of DNA (at least 20 kb) involved in the polymorphisms. The RFLPs were chimpanzee specific and were not found in man, gorilla, orangutan, or gibbon. Multiple RFLPs distinguishing primate species are rare and may be useful markers for molecular evolution.
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    URL: http://dx.doi.org/10.1007/BF00561339
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    The gene coding for glutamate dehydrogenase inDrosophila melanogaster (1990)
    Springer
    Biochemical genetics 28 (1990), S. 337-346 
    Details
    ISSN: 1573-4927
    Keywords: glutamate dehydrogenase ; Drosophila melanogaster ; gene expression ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Abstract We have isolated theDrosophila melanogaster locus coding forl-glutamate dehydrogenase (EC 1.4.1.3) by virtue of its similarity to the corresponding human gene. There is only one copy of this gene in the fruit fly genome, located on the right arm of chromosome 3 (95D1-4). The transcript includes at least one large intron and matures to a ∼2.4-kb-long polyadenylated RNA whose expression is under developmental control.
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    URL: http://dx.doi.org/10.1007/BF02401423
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    Personality and reproductive fitness (1990)
    Springer
    Behavior genetics 20 (1990), S. 563-568 
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    ISSN: 1573-3297
    Keywords: personality ; fertility ; family size ; fitness ; extraversion ; neuroticism ; impulsivity ; genetic architecture ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Psychology
    Notes: Abstract The relationship between reproductive success (number of biological children) and personality was explored in 1101 postmenopausal females from the Australian twin registry. The quadratic response surface relating fitness to extraversion (E) and neuroticism (N) showed a saddle point at intermediate levels of E and N. Selection was shown to be stabilizing, i.e.,having an intermediate optimum, along the axis low E, low N-high E, high N and more mildly disruptive, having greater fitness in the extremes, along the axis low N, high E-high N, low E. Neither dimension of personality considered by itself showed a significant linear or quadratic relationship to reproductive success. Sections through the fitness surface, however, show selection tends to favor high neuroticism levels in introverts and low neuroticism levels in extroverts.
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    URL: http://dx.doi.org/10.1007/BF01065872
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    Nucleotide sequence ofatpB,rbcL,trnR,dedB andpsaI chloroplast genes from a fernAngiopteris lygodiifolia: a possible emergence of Spermatophyta lineage before the separation of Bryophyta and Pteridophyta (1992)
    Springer
    Plant molecular biology 18 (1992), S. 79-82 
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    ISSN: 1573-5028
    Keywords: Angiopteris lygodiifolia ; atpB ; chloroplast genome ; evolution ; rbcL ; trnR
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract To elucidate the evolutionary relationship between the Spermatophyta, Pteridophyta and Bryophyta, we cloned a fragment of chloroplast DNA from the fernAngiopteris lygodiifolia (Pteridophyta) and determined its nucleotide sequence. The fragment contained theatpB,rbcL,trnR-CCG,dedB andpsaI genes. Comparisons of the deduced amino acid and nucleotide sequences of these genes from the three plant groups indicate thatAngiopteris sequences are more closely related to those of Bryophyta species (85% identity on average) than to those of seed plants (76% identity on average), supporting a hypothesis that the Bryophyta and Pteridophyta diverged more recently from one another than their common progenitor diverged from that of the Spermatophyta.
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    The activation process of Arabidopsis thaliana A1 gene encoding the translation elongation factor EF-1α is conserved among angiosperms (1992)
    Springer
    Plant molecular biology 18 (1992), S. 1083-1089 
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    ISSN: 1573-5028
    Keywords: translation elongation factor genes ; promoter analysis ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract In Arabidopsis thaliana, the activation process of the A1 EF-1α gene depends on several elements. Using the GUS reporter gene, transient expression experiments have shown that mutations of upstream cis-acting elements of the A1 promoter, or the deletion of an intron located within the 5′ non-coding region, similarly affect expression in dicot or monocot protoplasts. The results reported here strongly suggest that this 5′ intron is properly spliced in Zea mays. We show that two trans-acting factors, specifically interacting with an upstream activating sequence (the TEF 1 box), are present in nuclear extracts prepared from A. thaliana, Brassica rapa, Nicotiana tabacum and Z. mays. In addition, a DNA sequence homologous to the TEF 1 box, found at approximately the same location within a Lycopersicon esculentum EF-1α promoter, interacts with the same trans-acting factors. Homologies found between the A. thaliana and L. esculentum TEF 1 box sequences have allowed us to define mutations of this upstream element which affect the interaction with the corresponding trans-acting factors. These results support the notion that the activation processes of A. thaliana EF-1α genes have been conserved among angiosperms and provide interesting data on the functional structure of the TEF 1 box.
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    A 16 kb small single-copy region separates the plastid DNA inverted repeat of the unicellular red alga Cyanidium caldarium: physical mapping of the IR-flanking regions and nucleotide sequences of the psbD-psbC, rps16, 5S rRNA and rpl21 genes (1992)
    Springer
    Plant molecular biology 19 (1992), S. 1001-1010 
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    ISSN: 1573-5028
    Keywords: Cyanidium caldarium Geitler ; evolution ; Galdieria sulphuraria ; inverted repeat ; plastid DNA ; psbD-psbC operon ; red algae ; 5S rRNA ; rpl21 ; rps16
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The four inverted repeat (IR) flanking regions of the Cyanidium caldarium plastid DNA were cloned. Southern blotting, transcript and sequence analyses of the border regions revealed the psbD-psbC operon and the rps16 gene within the large single-copy region upstream of the 16S rDNA gene and the rpl21 gene downstream of the 5S rDNA within the 16 kb small single-copy region. The size of the IR is ca. 5 kb. The nucleotide sequences of the psbD-psbC, rps16, rpl21 and 5S rRNA genes with the corresponding alignments and physical maps of the regions are presented. Northern analysis revealed a less complex psbD-psbC transcription pattern than has been found in higher plants. Comparisons to other red algal data point to structural diversity within red algal plastid DNA.
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    Comparison of regions coding for tRNAHis genes of mitochondrial and chloroplast DNA in sunflower: a proposal concerning the classification of ‘CP-like’ tRNA genes (1992)
    Springer
    Plant molecular biology 20 (1992), S. 1-4 
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    ISSN: 1573-5028
    Keywords: higher plants ; sunflower ; chloroplast genome ; mitochondrial genome ; tRNAHis genes ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
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    URL: http://dx.doi.org/10.1007/BF00029143
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    An equivalent to bacterialompR genes is encoded on the plastid genome of red algae (1992)
    Springer
    Plant molecular biology 18 (1992), S. 777-780 
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    ISSN: 1573-5028
    Keywords: Cyanidium caldarium ; evolution ; Galdieria sulphuraria ; rRNA operon
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
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    URL: http://dx.doi.org/10.1007/BF00020019
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    Phylogenetic relationships and gene flow between sympatric diploid and tetraploid plants ofDactylis glomerata (Gramineae) (1990)
    Springer
    Plant systematics and evolution 169 (1990), S. 81-96 
    Details
    ISSN: 1615-6110
    Keywords: Angiosperms ; Gramineae ; Festuceae ; Dactylis glomerata ; Enzymatic markers ; phenology ; interploid exchanges ; autopolyploidy ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Phylogenetic relationships between sympatric, morphologically indistinguishable diploid and tetraploid plants ofDactylis glomerata L. (Gramineae) in Galicia (Spain) were assessed using allozyme markers for 6 distinct systems. The study exploited recent introduction in Galicia and subsequent hybridization of an alien 4xDactylis subspecies possessing distinct allozymes from those of all the native plants. Opportunities for gene exchanges between the ploidies were estimated from in situ observations of flowering, examination of progenies in 2x/4x natural and experimental crosses, and enzyme analyses. Results show a high genetic similarity between the Galician diploids and tetraploids, which possess peculiar alleles in common. Although the ploidy levels usually have distinct flowering periods, interploidal crosses do occasionally occur. Gene flow is likely much more important from the diploid to the tetraploid level. A good genetic intermixing occurs between the Galician and the alien tetraploid entities which have simultaneous flowering. Autopolyploidization of the diploids followed by various rates of hybridization is proposed as one very probable origin of natural tetraploids inDactylis.
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    URL: http://dx.doi.org/10.1007/BF00935987
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    Domatia as most important adaptations in the evolution of myrmecophytes in the paleotropical tree genusMacaranga (Euphorbiaceae) (1992)
    Springer
    Plant systematics and evolution 180 (1992), S. 53-64 
    Details
    ISSN: 1615-6110
    Keywords: Angiosperms ; Euphorbiaceae ; Macaranga ; Ant-plant interactions ; domatia ; evolution ; myrmecophytism ; Flora of Malaysia
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The paleotropical tree genusMacaranga (Euphorbiaceae) comprises all stages of interaction with ants, from facultative associations to obligate myrmecophytes. In SE.-Asia food availability does not seem to be the limiting factor for the development of a close relationship since all species provide food for ants in form of extrafloral nectar and/or food bodies. Only myrmecophyticMacaranga species offer nesting space for ants (domatia) inside internodes which become hollow due to degeneration of the pith. Non-myrmecophytic species have a solid stem with a compact and wet pith and many resin ducts. The stem interior of some transitional species remains solid, but the soft pith can be excavated. The role of different ant-attracting attributes for the development of obligate ant-plant interactions is discussed. In the genusMacaranga, the provision of nesting space seems to be the most important factor for the evolution of obligate myrmecophytism.
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    Phylogenetic evidence for the herbaceous origin of angiosperms (1992)
    Springer
    Plant systematics and evolution 180 (1992), S. 137-156 
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    ISSN: 1615-6110
    Keywords: Angiosperms ; evolution ; origin ; ancestral angiosperm ; morphology
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The ancestral angiosperm is commonly interpreted as an arborescent to shrubby magnolialean with large, multiparted, complex flowers. We examined this hypothesis using a phylogenetic analysis of new and reevaluated characters polarizabled with outgroup comparison. Our cladistic analysis of basal angiosperms placed the nonmagnolialeanChloranthaceae andPiperaceae at the bottom of the tree. We further inferred the probable ancestral states of characters not polarizable with outgroup comparison by examining their distribution among taxa at the base of our cladogram. The sum of ancestral character states suggests that the protoangiosperm was a diminutive, rhizomatous to scrambling perennial herb, with small, simple flowers.
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    Isozyme variation and alleged progenitor-derivative relationships in theMedicago murex complex (Fabaceae) (1992)
    Springer
    Plant systematics and evolution 181 (1992), S. 33-43 
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    ISSN: 1615-6110
    Keywords: Angiosperms ; Fabaceae ; Medicago murex ; M. lesinsii ; Systematics ; evolution ; isozymes ; chromosomes
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Chromosomal studies ofMedicago lesinsii (n = 8) and its close relativeM. murex (n = 7) have led to the competing hypotheses that the latter is derived directly from the former, or that both originated from a common ancestor. In contrast to the relatively variableM. murex, M. lesinsii proved to be almost uniform isozymically, except that most populations of Greece differed by one allele from plants of the remainder of the range. This Greek variant ofM. lesinsii was indistinguishable from one of the isozyme variants ofM. murex. The greater level of allozyme variation inM. murex was consistent with its greater ecological amplitude and competitive ability. Also, this suggests thatM. murex is unlikely to have originated directly from the less variableM. lesinsii. The data suggest that either both species originated from a common ancestor, or that the n = 8 species evolved from the n = 7 species, a mode of chromosome evolution not previously hypothesized for the genus.
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    Phenetic, biogeographical, and evolutionary study ofOrnithogalum subg.Heliocharmos (Hyacinthaceae) in the western Mediterranean basin (1992)
    Springer
    Plant systematics and evolution 181 (1992), S. 179-202 
    Details
    ISSN: 1615-6110
    Keywords: Hyacinthaceae ; Ornithogalum ; Heliocharmos ; O. algeriense ; O. kochii ; O. orthophyllum ; O. umbellatum ; Numerical taxonomy ; phenetics ; systematics ; biogeography ; evolution ; Flora of North Africa ; Mediterranean ; Morocco ; Spain ; France
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A macromorphological study is made on taxa of the genusOrnithogalum subg.Heliocharmos in North Africa, Spain, and France. The results obtained are consistent with data from cytogenetics, reproductive biology and strategies of reproduction. They allow the retention of two species:O. algeriense andO. umbellatum. A biogeographical and phylogenetic interpretation of the subgenus is proposed for the western Mediterranean. Theoretical views on phenetics are discussed.
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    The 5S DNA units ofAcacia species (Mimosaceae) (1992)
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    Plant systematics and evolution 183 (1992), S. 235-247 
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    ISSN: 1615-6110
    Keywords: Angiosperms ; Mimosaceae ; Acacia ; 5S DNA ; evolution ; phylogeny ; chromosomal lineages
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The DNA sequence structure of 5S DNA units inAcacia species, including representatives from the three subgenera ofAcacia, have been determined. The data was interpreted to suggest that at least three lineages of 5S DNA sequences exist inAcacia and the proposal was made that the lineages be named5S Dna-1, 5S Dna-2, and5S Dna-3. The5S Dna-1 lineage was represented by units fromA. boliviana andA. bidwilli, the5S Dna-2 lineage by units fromA. melanoxylon, A. pycnantha, A. ulicifolia, A. boliviana, A. bidwillii, andA. albida, and the5S Dna-3 lineage by units fromA. bidwillii, A. boliviana, andA. senegal. Based on this interpretation of the sequence data, the Australian species of subg.Phyllodineae grouped together as a cluster, quite separate from the subgeneraAculeiferum andAcacia. As expected from the analyses of morphological characters, the 5S DNA units fromAcacia albida (syn.Faidherbia albida) were quite separate from the otherAcacia spp.
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    Relationships betweenOryza species (Poaceae) based on 5S DNA sequences (1992)
    Springer
    Plant systematics and evolution 183 (1992), S. 249-264 
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    ISSN: 1615-6110
    Keywords: Poaceae ; Oryza ; 5S DNA ; phylogeny ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Relationships between 9Oryza species, covering 6 different genomes, have been studied using hybridization and nucleotide sequence information from the5S Dna locus. Four to five units of the major size class of 5S DNA in each species, 55 units in all, were cloned and sequenced. Both hybridization and sequence data confirmed the basic differences between the A and B, C, D genome species suggested by morphological and cytological data. The 5S DNA units of the A genome species were very similar, as were the ones from the B, C, and D genome-containing species. The 5S DNA ofO. australiensis (E genome) grouped with the B, C, D cluster, while the units ofO. brachyantha (F genome) were quite different and grouped away from all other species. 5S DNA units fromO. minuta, O. latifolia, O. australiensis, andO. brachyantha hybridized strongly, and preferentially, to the genomic DNA from which the units were isolated and hence could be useful as species/genome specific probes. The 5S DNA units fromO. sativa, O. nivara, andO. rufipogon provided A genome-specific probes as they hybridized preferentially to A genome DNA. The units fromO. punctata andO. officinalis displayed weaker preferential hybridization toO. punctata DNA, possibly reflecting their shared genome (C genome).
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    Evolution of genome size inAllium (Alliaceae) (1998)
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    Plant systematics and evolution 210 (1998), S. 57-86 
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    ISSN: 1615-6110
    Keywords: Alliaceae ; Allium ; Nuclear DNA amount ; adaptation ; evolution ; infrageneric classification
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The 4C DNA amounts of 86 species fromAllium subgg.Allium, Rhizirideum, Bromatorrhiza, Melanocrommyum, Caloscordum andAmerallium show a 8.35-fold difference ranging from 35.60 pg (A. ledebourianum, 2n = 16) to 297.13 pg (A. validum 2n = 56). At diploid level the difference is 3.57-fold betweenA. ledebourianum (35.60 pg) andA. ursinum (127.14 pg). This shows that a significant loss and/or gain of DNA has occurred during evolution. On average subgg.Rhizirideum andAllium have less DNA amount than subgg.Melanocrommyum andAmerallium. The distribution of nuclear DNA amounts does not show discontinuous pattern and regular groups. The evolution of genome size has been discussed in relation to polyploidy and genomes, heterochromatin, adaptive changes in morphological characteristics, phenology and ecological factors, and infrageneric classification.
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    Genetic markers, genealogies and biogeographic patterns in the cladocera (1998)
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    Aquatic ecology 32 (1998), S. 37-51 
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    ISSN: 1573-5125
    Keywords: microcrustaceans ; Daphnia ; evolution ; interspecific hybridization ; molecular systematics ; aquatic ecology
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Cladoceran crustaceans are an important component of zooplankton in a wide range of freshwater habitats. Although the ecological characteristics of several cladoceran species have been well studied, biogeographical studies have been hampered by problematic taxonomic affiliations. However, recently developed molecular techniques, provide a powerful tool to subject aquatic taxa to comparative analyses. Here we highlight recent molecular approaches in aquatic ecology by presenting a simple method of DNA preparation and PCR amplification of the mitochondrial DNA (16S rDNA) in species from nine different families within the cladocera. On a broad taxonomic scale, sequence analysis of this mtDNA fragment has been used to produce the first molecular based phylogeny of the cladocera. This analysis clustered the cladoceran families in a fashion similar to that suggested by previous systematic classifications. In a more detailed analysis of the family Daphniidae, nuclear randomly amplified polymorphic DNA (RAPD), mitochondrial restriction fragment length polymorphism (RFLP) and morphological analyses were combined to identify species and interspecific hybrids within the Daphnia galeata species complex across 50 lakes in 13 European countries and one lake in Africa. The study revealed interspecific hybridization and backcrossing between some taxa (D. cucullata and D. galeata) to be widespread, and species and hybrids to frequently occur in sympatry. Genetic, as well as morphological information, suggests the occurrence of D. hyalina outside the Holarctic.
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    Modeling in the museum: On the role of remnant models in the work of Joseph Grinnell (1990)
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    Biology and philosophy 5 (1990), S. 3-36 
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    ISSN: 1572-8404
    Keywords: Material models ; semantic view of theories ; natural history ; ecology ; evolution ; museums ; Joseph Grinnell
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Philosophy
    Notes: Abstract Accounts of the relation between theories and models in biology concentrate on mathematical models. In this paper I consider the dual role of models as representations of natural systems and as a material basis for theorizing. In order to explicate the dual role, I develop the concept of a remnant model, a material entity made from parts of the natural system(s) under study. I present a case study of an important but neglected naturalist, Joseph Grinnell, to illustrate the extent to which mundane practices in a museum setting constitute theorizing. I speculate that historical and sociological analyses of institutions can play a specific role in the philosophical analysis of model-building strategies.
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    Really taking Darwin seriously: An alternative to Michael Ruse's Darwinian metaethics (1990)
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    Biology and philosophy 5 (1990), S. 149-173 
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    ISSN: 1572-8404
    Keywords: Darwinian ethics ; ethics ; evolution ; evolutionary ethics ; M. Ruse ; naturalistic fallacy ; sociobiology
    Source: Springer Online Journal Archives 1860-2000
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    Notes: Abstract Michael Ruse has proposed in his recent book Taking Darwin Seriously and elsewhere a new Darwinian ethics distinct from traditional evolutionary ethics, one that avoids the latter's inadequate accounts of the nature of morality and its failed attempts to provide a naturalistic justification of morality. Ruse argues for a sociobiologically based account of moral sentiments, and an evolutionary based casual explanation of their function, rejecting the possibility of ultimate ethical justification. We find that Ruse's proposal distorts, overextends and weakens both Darwinism and naturalism. So we propose an alternative Darwinian metaethics that both remedies the problems in Ruse's proposal and shows how a Darwinian naturalistic account of the moral good in terms of human fitness avoids the naturalistic fallacy and can provide genuine, even if limited, justifications for substantive ethical claims. Thus, we propose to really take Darwin seriously.
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    Evolved ethics re-examined: The theory of Robert J. Richards (1990)
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    Biology and philosophy 5 (1990), S. 451-457 
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    ISSN: 1572-8404
    Keywords: Auschwitz ; biology ; ethics ; evolution ; moral theory ; naturalistic fallacy ; Richards
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Philosophy
    Notes: Conclusion Richards's theory, then, fails on three counts. By illegitimately importing a premise from outside of the theory of evolution in order to construct a valid argument, Richards has failed to achieve his objective of deriving a moral theory exclusively from biological facts. By sliding from a causal use of “ought” to a moral one, Richards commits the fallacy of ambiguity. And by insisting that action from the motive of altruism is moral while claiming that an ethical theory which justifies Hitler's camps must be judged false, Richards has falsified his own ethical theory.
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    Mental content and evolutionary explanation (1992)
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    Biology and philosophy 7 (1992), S. 1-12 
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    ISSN: 1572-8404
    Keywords: Cognitive ethology ; mental content ; mental representations ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Philosophy
    Notes: Abstract Cognitive ethology is the comparative study of animal cognition from an evolutionary perspective. As a sub-discipline of biology it shares interest in questions concerning the immediate causes and development of behavior. As a part of ethology it is also concerned with questions about the function and evolution of behavior. I examine some recent work in cognitive ethology, and I argue that the notions of mental content and representation are important to enable researchers to answer questions and state generalizations about the function and volution of behavior.
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    URL: http://dx.doi.org/10.1007/BF00130160
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    What is hierarchical selection? (1992)
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    Biology and philosophy 7 (1992), S. 27-33 
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    ISSN: 1572-8404
    Keywords: Additivity ; ANOVA ; evolution ; hierarchical selection
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Philosophy
    Notes: Abstract It has been proposed that natural selection occurs on a hierarchy of levels, of which the organismic level is neither the top nor the bottom. This hypothesis leads to the following practical problem: in general, how does one tell if a given phenomenon is a result of selection on level X or level Y. How does one tell what the units of selection actually are? It is convenient to assume that a unit of selection may be defined as a type of entity for which there exists, among all entities on the same “level” as that entity, an additive component of variance for some specific component F of fitness which does not appear as an additive component of variance in any decomposition of this F among entities at any lower level. But such a definition implicitly assumes that if f(x, y) depends nonadditively on its arguments, there must be interaction between the quantities which x and y represent. This assumption is incorrect. And one cannot avoid this error by speaking of “transformability to additivity” instead of merely “additivity”. A general mathematical formulation of the concepts of interaction and non-interaction is proposed, followed by a correspondingly modified approach to the definition of a unit of selection. The practical difficulty of verifying the presence of hierarchical selection is discussed.
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    An ecological approach to biosystem thermodynamics (1992)
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    Biology and philosophy 7 (1992), S. 35-60 
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    ISSN: 1572-8404
    Keywords: Action principles ; ecosystem structure ; evolution ; information ; natural selection ; non-equilibrium thermodynamics ; teleology
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Philosophy
    Notes: Abstract The general attributes of ecosystems are examined and a naturally occurring “reference ecosystem” is established, comparable with the “isolated” system of classical thermodynamics. Such an autonomous system with a stable, periodic input of energy is shown to assume certain structural characteristics that have an identifiable thermodynamic basis. Individual species tend to assume a state of “least dissipation”; this is most clearly evident in the dominant species (the species with the best integration of energy acquisition and conservation). It is concluded that ecosystem structure results from the antagonistic interaction of two nearly equal forces. These forces have their origin in the Principle of Most Action (“least dissipation” or “least entropy production”) and the universal Principle of Least Action. “Most action” is contingent on the equipartitioning of the energy available, through uniform interaction of similar individuals. The trend to “Least action” is contingent on increased dissipation attained through increasing diversity and increasing complexity. These principles exhibit a basic asymmetry. Given the operation of these opposing principles over evolutionary time, it is argued that ecosystems originated in the vicinity of thermodynamic equilibrium through the resonant amplification of reversible fluctuations. On account of the basic asymmetry the system was able to evolve away from thermodynamic equilibrium provided that it remained within the vicinity of “ergodynamic equilibrium” (equilibrium maintained by internal work, where the opposing forces are equal and opposite). At the highest level of generalization there appear to be three principles operating: i) maximum association of free-energy and materials; ii) energy conservation (deceleration of the energy flow) through symmetric interaction and increased homogeneity; and iii) the principle of least action which induces acceleration of the energy flow through asymmetrical interaction. The opposition and asymmetry of the two forces give rise to natural selection and evolution.
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    On the relationship between evolutionary and psychological definitions of altruism and selfishness (1992)
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    Biology and philosophy 7 (1992), S. 61-68 
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    Keywords: Altruism ; evolution ; group selection ; selfishness
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Philosophy
    Notes: Abstract I examine the relationship between evolutionary definitions of altruism that are based on fitness effects and psychological definitions that are based on the motives of the actor. I show that evolutionary altruism can be motivated by proximate mechanisms that are psychologically either altruistic or selfish. I also show that evolutionary definitions do rely upon motives as a metaphor in which the outcome of natural selection is compared to the decisions of a psychologically selfish (or altruistic) individual. Ignoring the precise nature of both psychological and evolutionary definitions has obscured many important issues, including the biological roots of psychological altruism.
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    Evolution, altruism, and the prisoner's dilemma (1992)
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    Biology and philosophy 7 (1992), S. 161-175 
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    ISSN: 1572-8404
    Keywords: Altruism ; evolution ; Prisoner's Dilemma ; sociobiology
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    Notes: Abstract I first argue against Peter Singer's exciting thesis that the Prisoner's Dilemma explains why there could be an evolutionary advantage in making reciprocal exchanges that are ultimately motivated by genuine altruism over making such exchanges on the basis of enlightened long-term self-interest. I then show that an alternative to Singer's thesis — one that is also meant to corroborate the view that natural selection favors genuine altruism, recently defended by Gregory Kavka, fails as well. Finally, I show that even granting Singer's and Kavka's claim about the selective advantage of altruism proper, it is doubtful whether that type of claim can be used in a particular sort of sociobiological argument against psychological egoism.
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    The evolution of altruism: Correlation, cost, and benefit (1992)
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    Biology and philosophy 7 (1992), S. 177-187 
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    Keywords: Altruism ; evolution ; game theory ; group selection ; kin selection ; prisoner's dilemma
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Philosophy
    Notes: Abstract A simple and general criterion is derived for the evolution of altruism when individuals interact in pairs. It is argued that the treatment of this problem in kin selection theory and in game theory are special cases of this general criterion.
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    Phylogenetic definitions and taxonomic philosophy (1992)
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    Biology and philosophy 7 (1992), S. 295-313 
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    ISSN: 1572-8404
    Keywords: Clade ; class ; composite whole ; definition ; defining property ; essentialism ; evolution ; individual ; intension ; name ; ostensive definition ; phylogeny ; population ; set ; species ; taxon ; taxonomy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Philosophy
    Notes: Abstract An examination of the post-Darwinian history of biological taxonomy reveals an implicit assumption that the definitions of taxon names consist of lists of organismal traits. That assumption represents a failure to grant the concept of evolution a central role in taxonomy, and it causes conflicts between traditional methods of defining taxon names and evolutionary concepts of taxa. Phylogenetic definitions of taxon names (de Queiroz and Gauthier 1990) grant the concept of common ancestry a central role in the definitions of taxon names and thus constitute an important step in the development of phylogenetic taxonomy. By treating phylogenetic relationships rather than organismal traits as necessary and sufficient properties, phylogenetic definitions remove conflicts between the definitions of taxon names and evolutionary concepts of taxa. The general method of definition represented by phylogenetic definitions of clade names can be applied to the names of other kinds of composite wholes, including populations and biological species. That the names of individuals (composite wholes) can be defined in terms of necessary and sufficient properties provides the foundation for a synthesis of seemingly incompatible positions held by contemporary individualists and essentialists concerning the nature of taxa and the definitions of taxon names.
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    Buffon, Darwin, and the Non-Individuality of Species – A Reply to Jean Gayon (1998)
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    Biology and philosophy 13 (1998), S. 443-470 
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    ISSN: 1572-8404
    Keywords: Buffon ; Darwin ; Gayon ; species ; individuality ; evolution
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    Topics: Biology , Philosophy
    Notes: Abstract Gayon's recent claim that Buffon developed a concept of species as physical individuals is critically examined and rejected. Also critically examined and rejected is Gayon's more central thesis that as a consequence of his analysis of Buffon's species concept, and also of Darwin's species concept, it is clear that modern evolutionary theory does not require species to be physical individuals. While I agree with Gayon's conclusion that modern evolutionary theory does not require species to be physical individuals, I disagree with his reasons and instead provide logical rather than historical reasons for the same conclusion.
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    Evolution Without Change in Gene Frequencies (1998)
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    Biology and philosophy 13 (1998), S. 255-261 
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    ISSN: 1572-8404
    Keywords: evolution ; speciation ; levels of selection
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Philosophy
    Notes: Abstract Biologists often define evolution as a change in allele frequencies. Consideration of the evolution of the pocket mouse will show that it is possible to have evolution without any change in the allele frequencies in a population (through change in the genotype frequencies). The implications of this for genic selectionism are then discussed. Sober and Lewontin (1982) have constructed an example to demonstrate the “blindness” of genic selectionism in certain cases. Sterelny and Kitcher (1988) offer a defense against these arguments which assumes a conventionalist approach to populations. The example considered here will be shown to offer a more plausible and far-reaching argument against the view that alleles can always be seen as the units of selection.
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    Taxonomy and Philosophy of Names (1998)
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    Biology and philosophy 13 (1998), S. 233-244 
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    ISSN: 1572-8404
    Keywords: reference ; meaning ; individual ; class ; definition ; clade ; evolution ; phylogeny ; phylogenetic taxonomy ; systematics ; tree-thinking ; cladistics ; intention ; extension
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Philosophy
    Notes: Abstract Although naming biological clades is a major activity in taxonomy, little attention has been paid to what these names actually refer to. In philosophy, definite descriptions have long been considered equivalent to the meaning of names and biological taxonomy is a scientific application of these ideas. One problem with definite descriptions as the meanings of names is that the name will refer to whatever fits the description rather than the intended individual (clade). Recent proposals for explicit phylogenetic definitions of clade names suffer from similar problems and we argue that clade names cannot be defined since they lack intension. Furthermore we stress the importance of “tree-thinking” for phylogenetic reference to work properly.
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    On the Relationship Between Memes and Genes: A Critique of Dennett (1998)
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    Biology and philosophy 13 (1998), S. 187-204 
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    ISSN: 1572-8404
    Keywords: evolution ; meme ; gene ; morality ; culture ; psychological predisposition
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Philosophy
    Notes: Abstract Dennett (1995) argues that memes or cultural replicators are largely autonomous of genes, and that they are fairly efficacious in determining who we are and what we do. I argue that Dennett's arguments are wrong in several aspects, which we can see by analyzing processes at appropriate levels. Specifically, I argue that it is not true that we as persons are created largely by memes, that our memes are not largely independent of our genes, and that we can use the universality of memes to make inferences about genetic predispositions. Finally, by suggesting an innate psychological mechanism for morality, I argue that morality may be largely the effect of genetic predispositions rather than autonomous.
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    The Tragedy of a priori Selectionism: Dennett and Gould on Adaptationism (1998)
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    Biology and philosophy 13 (1998), S. 359-391 
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    ISSN: 1572-8404
    Keywords: adaptation ; algorithm ; atavism ; contingency ; deep homology ; Dennett ; development ; disparity ; epicurean selectionism ; evolution ; exaptation ; Gould ; metaphors ; punctuated equilibrium ; selectionism ; spandrels
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Philosophy
    Notes: Abstract In his recent book on Darwinism, Daniel Dennett has offered up a species of a priori selectionism that he calls algorithmic. He used this view to challenge a number of positions advocated by Stephen J. Gould. I examine his algorithmic conception, review his unqualified enthusiasm for the a priori selectionist position, challenge Dennett's main metaphors (cranes vs. skyhooks and a design space), examine ways in which his position has lead him to misunderstand or misrepresent Gould (spandrels, exaptation, punctuated equilibrium, contingency and disparity), and discuss recent results in developmental biology that suggest that an a priori position does not fill the demands of an evolutionary biology. I conclude by insisting that evolutionary biology is many leveled, complicated, and is carried on an ever shifting and expanding empirical base that when disregarded results in caricature.
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    Speciation of endemic Lake Tana barbs (Cyprinidae, Ethiopia) driven by trophic resource partitioning; a molecular and ecomorphological approach (1998)
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    Aquatic ecology 32 (1998), S. 217-227 
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    ISSN: 1573-5125
    Keywords: ecomorphology ; evolution ; feeding ; fish stocks ; major histocompatibility complex ; molecular genetics ; species flock
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A unique species flock of large barbs (Barbus spp.) from Lake Tana is presented, from the level of fish stocks to molecules. Evidence is given for the species status of 14 morphotypes of large barbs. They distinctly differ in: (1) head and body morphometrics, (2) food preferences, (3) distribution patterns, (4) maximal body size, (5) spawning area and period, and (6) molecular genetic characters. Most types show early morphological divergence at small size. Major Histocompatibility Complex (MHC) genes, encoding cell membrane proteins involved in defence against pathogens, were found to be diagnostic for the species' genetic identity. A strong selective pressure on particular amino acid positions in the MHC protein sequence most probably arose in response to different pathogen loads from the newly invaded ecological niches after formation of Lake Tana, ca. two million years ago. Arguments for a sympatric origin of this species flock are discussed. An evolutionary scenario suggests a riverine ancestral Barbus intermedius invading Lake Tana after its formation by volcanic blocking of the Blue Nile river and its isolation by waterfalls. Specialisation for particular food types and disruptive selection on many feeding structures are hypothesized as the evolutionary drive in speciation. The causal relationship between the diversity in feeding structures and food types is explained from experiments and models. As an example, the potential food niche of three barb species is predicted from parameter values measured from a large set of feeding structures and tested against the actual gut contents. The co-occurrence of eight piscivorous barb species is unique for cyprinid fish, which lack oral jaw teeth and a stomach. The significance of this aquatic ecosystem as a multidisciplinary evolutionary laboratory and the need for a wise balance between exploitation and conservation is stressed.
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    The species censorship problem: A general solution (1990)
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    Mathematical geology 22 (1990), S. 95-106 
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    ISSN: 1573-8868
    Keywords: evolution ; extinction ; macroevolution ; probability ; species longevity
    Source: Springer Online Journal Archives 1860-2000
    Topics: Geosciences , Mathematics
    Notes: Abstract The longevities of species constituting a statistical population have an underlying distribution whose form and parametric values reflect probabilities of origination and extinction through time. In the case that a part of the population is extant, the form of distribution and its parameters cannot be estimated directly from the longevity data without bias. Longevities of extant “censored” species are truncated and thus do not statistically represent the underlying distribution. The remaining “uncensored” species do not represent the true relative abundances of longevities. These biases can be defined from the probability densities for species longevitys and intervalr between successive originations of species. For realistic densities ofs andr, species with an intermediate longevity are preferentially censored. This simple, general result arises because the probability of censoring a species increases with its longevity, whereas the probability of censoring a given longevity varies with its relative abundance.
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    Amalthaea: An Evolving Multi-Agent Information Filtering and Discovery System for the WWW (1998)
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    Autonomous agents and multi-agent systems 1 (1998), S. 59-88 
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    ISSN: 1573-7454
    Keywords: agents ; evolution ; information filtering ; world wide web
    Source: Springer Online Journal Archives 1860-2000
    Topics: Computer Science
    Notes: Abstract Amalthaea is an evolving, multi-agent ecosystem for personalized filtering, discovery, and monitoring of information sites. Amalthaea's primary application domain is the World Wide Web and its main purpose is to assist its users in finding interesting information. Two different categories of agents are introduced in the system: filtering agents that model and monitor the interests of the user and discovery agents that model the information sources.A market-like ecosystem where the agents evolve, compete, and collaborate is presented: agents that are useful to the user or other agents reproduce, while low-performing agents are destroyed. Results from various experiments with different system configurations and varying ratios of user interests versus agents in the system are presented. Finally issues like fine-tuning the initial parameters of the system and establishing and maintaining equilibria in the ecosystem are discussed.
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    Complete sequence of the mitochondrial DNA of Chlamydomonas eugametos (1998)
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    Plant molecular biology 36 (1998), S. 285-295 
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    ISSN: 1573-5028
    Keywords: Chlamydomonas eugametos ; evolution ; genome sequence ; green algae ; group I introns ; mitochondrial DNA
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The complete nucleotide sequence of the Chlamydomonas eugametos (Chlamydomonadales, Chlorophyceae, sensu Mattox and Stewart) mitochondrial genome has been determined (22 897 bp, 34.6% G + C). The genes identified in this circular-mapping genome include those for apocytochrome b, subunit 1 of the cytochrome oxidase complex, subunits 1, 2, 4, 5, and 6 of the NADH dehydrogenase complex, discontinuous large and small subunit ribosomal rRNAs and three tRNAs whose anticodons CAU, CCA and UUG are specific for methionine, tryptophan and glutamine, respectively. The C. eugametos mitochondrial DNA (mtDNA), therefore, shares almost the same reduced set of coding functions and similar unusual features of rRNA gene organization with the linear 15.8 kb mtDNA of Chlamydomonas reinhardtii, the only other completely sequenced chlamydomonadalean mtDNA. However, sequence analysis of the C. eugametos mtDNA has revealed the following distinguishing features relative to those of C. reinhardtii: (1) the absence of a reverse transcriptase-like gene homologue, (2) the presence of an additional gene for tRNAmet that may be a pseudogene, (3) a completely different gene order, (4) transcription of all genes from the same mtDNA strand, (5) a lower G + C content, (6) less pronounced bias in codon usage, and (7) nine group I introns, several of which contain open reading frames coding for potential maturases/endonucleases and two have a nucleotide at the 5′ or 3′ splice site of the deduced precursor RNAs that deviates from highly conserved nucleotides reported in other group I introns. The features of mitochondrial genome organization and gene content shared by C. eugametos and C. reinhardtii contrast with those of other green algal mtDNAs that have been characterized in detail. The deep evolutionary divergence between these two Chlamydomonas taxa within the Chlamydomonadales suggests that their shared features of mitochondrial genome organization evolved prior to the origin of this group.
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    Phagotrophy by a flagellate selects for colonial prey: A possible origin of multicellularity (1998)
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    Evolutionary ecology 12 (1998), S. 153-164 
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    ISSN: 1573-8477
    Keywords: algae ; anti-predator adaptations ; arms race ; Chlorella vulgaris ; chrysophytes ; continuous culture ; evolution ; flagellates ; multicellularity ; Ochromonas vallescia ; phagocyte ; predator–prey interactions ; selective pressure
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Predation was a powerful selective force promoting increased morphological complexity in a unicellular prey held in constant environmental conditions. The green alga, Chlorella vulgaris, is a well-studied eukaryote, which has retained its normal unicellular form in cultures in our laboratories for thousands of generations. For the experiments reported here, steady-state unicellular C. vulgaris continuous cultures were inoculated with the predator Ochromonas vallescia, a phagotrophic flagellated protist (‘flagellate’). Within less than 100 generations of the prey, a multicellular Chlorella growth form became dominant in the culture (subsequently repeated in other cultures). The prey Chlorella first formed globose clusters of tens to hundreds of cells. After about 10–20 generations in the presence of the phagotroph, eight-celled colonies predominated. These colonies retained the eight-celled form indefinitely in continuous culture and when plated onto agar. These self-replicating, stable colonies were virtually immune to predation by the flagellate, but small enough that each Chlorella cell was exposed directly to the nutrient medium.
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    Nest-site philopatry and selection for environmental sex determination (1998)
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    Evolutionary ecology 12 (1998), S. 245-250 
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    ISSN: 1573-8477
    Keywords: environmental sex determination ; evolution ; nest-site philopatry ; reptiles ; sex ratio
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The reason for the frequent occurrence of environmental sex determination (ESD) in reptiles is still not well understood, although much effort has been devoted to solving the issue. Stimulated by the occurrence of nest-site philopatry in some species, this paper examines a diploid model of the influence of nest-site philopatry on the evolution of ESD. Analysis shows that nest-site philopatry can lead to ESD because the fitnesses of sons and daughters are not influenced in the same way by nest-site quality. Daughters inherit the nest site and thus benefit more than sons from a high-quality nest site. Conversely, the fitness of daughters at low-quality nest sites is lower compared to the fitness of sons. Therefore, genes causing ESD can spread by causing the production of more sons at low-quality nest sites and more daughters at high-quality nest sites. Suggestions are made to test empirically whether nest-site philopatry led to the evolution of ESD.
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    Parental care and the allocation of resources across generations (1992)
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    Evolutionary ecology 6 (1992), S. 187-197 
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    ISSN: 1573-8477
    Keywords: parental care ; resource allocation ; ESS ; inclusive fitness ; menopause ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary To understand the evolution of parental care behaviour, the cost of care must be evaluated in terms of lost reproductive potential. Using population genetics theory, a quantitative model of parental care is presented here to evaluate the allocation of resources between production and care of offspring, and care of grandoffspring. The results show that the evolutionarily stable investment ratio of resources to offspring versus grandoffspring is equal to 2∶1. The expected investment in grandoffspring will decrease when there is a lower probability of survival of the parents to a late stage of the life cycle. These results are discussed in the context of general life history theory, inclusive fitness models, animal behaviour field studies, and the evolution of human menopause.
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    URL: http://dx.doi.org/10.1007/BF02214161
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    The cytotaxonomy ofEmilia spp. (Asteraceae: Senecioneae) occurring in Brazil (1990)
    Springer
    Plant systematics and evolution 170 (1990), S. 229-236 
    Details
    ISSN: 1615-6110
    Keywords: Angiosperms ; Asteraceae ; Emilia ; Chromosome numbers ; C-banding ; cytogeography ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Analysis of several populations in a large part of the distribution area of the genusEmilia in Brazil has revealed only two species: the diploidE. sonchifolia and the tetraploidE. fosbergii. The more widely reportedE. coccinea was not found. They show a karyotype constancy in morphology and chromosome number (2n = 10 and 2n = 20, respectively), C-banding pattern and number of secondary constrictions. Some indications were found thatE. fosbergii may be an allopolyploid and that its ancestors had different genome sizes.
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    URL: http://dx.doi.org/10.1007/BF00937706
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    Systematics and evolution within theCompositae, seen with the eyes of a chemist (1990)
    Springer
    Plant systematics and evolution 171 (1990), S. 1-14 
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    ISSN: 1615-6110
    Keywords: Angiosperms ; Compositae ; Chemistry ; systematics ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The broad knowledge of the chemistry of theCompositae allows the discussion of its relevance for the systematics and evolution within the family. Furthermore a separation into subfamilies can be supported by the observed differences in the distribution of the main constituents in the tribes.
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    URL: http://dx.doi.org/10.1007/BF00940593
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    Phylogenetic analysis of pines using ribosomal DNA restriction fragment length polymorphisms (1992)
    Springer
    Plant systematics and evolution 179 (1992), S. 141-153 
    Details
    ISSN: 1615-6110
    Keywords: Gymnosperms ; Conifers ; Pinaceae ; Pinus ; rDNA ; restriction fragments ; molecular systematics ; evolution ; phylogeny
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Phylogenetic relationships among 30 species of the genusPinus were studied using restriction site polymorphism in the large subunit of nuclear rDNA. Of the 58 restriction sites scored, 48 were phylogenetically informative, and the 30 species reduced to ten taxa when species with identical restriction site patterns were combined. These ten taxa corresponded to the currently recognized subsections of the genus, with the sole exception ofP. leiophylla, which was identical in its pattern of restriction sites to all three species included from subsect.Oocarpae despite its being in a different section of subg.Pinus (Pinea instead ofPinus). A measure of the proportion of phylogenetic information contained within the data set (Homoplasy Excess Ratio, or HER) revealed that the character states were significantly non-randomly distributed among the ten taxa (HER = 0.71, p 〈 0.01). Branchand-bound searches using either Wagner or Dollo parsimony as the optimization criterion were carried out using PAUP in order to estimate phylogenetic relationships among the ten taxa. Three taxa (Picea pungens, Tsuga canadensis, andLarix decidua) were used independently as outgroups for purposes of rooting the trees. Despite the extreme differences in the assumptions underlying the Wagner and Dollo parsimony, the two gave surprisingly similar estimates of phylogeny, with both analyses supporting the monophyly of the two major subgeneraPinus andStrobus and differing in topology only in the placement of subsect.Ponderosae within subg.Pinus. The likelihood for the Wagner tree was only slightly higher than that computed for the Dollo tree.
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    URL: http://dx.doi.org/10.1007/BF00937592
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    Ecogeographical differentiation patterns inAdonis sect.Consiligo (Ranunculaceae) (1998)
    Springer
    Plant systematics and evolution 211 (1998), S. 43-56 
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    ISSN: 1615-6110
    Keywords: Ranunculaceae ; Adonis ; Morphology ; growth pattern ; taxonomy ; ecology ; climatic requirements ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Adonis sect.Consiligo is split into three subsections based on morphology, growth pattern, pollen and fruit morphology. For all species distribution maps are provided and discussed with regard to their ecology and climatic requirements. These data reveal additional characters that support the classification of the taxa. Most species of the section grow in continental Eurasiatic steppes and mountain steppe habitats. Only the species of subsect.Amurenses grow in Far Eastern temperate forests and prefer a more oceanic climate. The taxonomic position of these strongly divergent species is supported by the distributional and ecological data. The evolution ofAdonis sect.Consiligo occurred under strong climatic control. During evolution the taxa could only slightly widen their ecological amplitude and, thus, ecology remained rather stable except that of the subsect.Amurenses. Ecological and distributional data can be used to validate taxonomy and phylogeny and reveal additional informations.
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    URL: http://dx.doi.org/10.1007/BF00984911
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    Genome size variation and C-band polymorphism inAlstroemeria aurea, A. ligtu andA. magnifica (Alstroemeriaceae) (1998)
    Springer
    Plant systematics and evolution 212 (1998), S. 87-106 
    Details
    ISSN: 1615-6110
    Keywords: Alstroemeriaceae ; Alstroemeria aurea ; A. ligtu ; A. magnifica ; C-band polymorphism ; evolution ; flow cytometry ; genome size
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Among a total of 43 accessions ofAlstroemeria aurea, A. ligtu andA. magnifica nuclear DNA amounts (2C-values) showed significant intraspecific variation, 1.09, 1.21 and 1.15 fold, respectively, when determined through flow cytometric measurements of fluorescence of propidium iodide (PI) stained nuclei. After staining with another fluorochrome, 4′,6-diamidino-2-phenylindole (DAPI), an intraspecific variation of 1.10, 1.11 and 1.12 fold, respectively, was found. C-band polymorphisms were present among and within the accessions of all three species. In some cases only very small differences in C-banding pattern were observed. In other cases, however, differences were more prominent. Besides C-band polymorphism, there were also instances of chromosome length polymorphism, which concerned the total chromosome complement or single chromosomes. The variation in nuclear DNA amount inA. aurea andA. ligtu was more or less continuous, except for one accession ofA. ligtu subsp.simsii. Artificial selection and possibly introgression of chromosomes from other species may have moulded the karyotypes of some of the accessions ofA. aurea, a species that has been under cultivation for more than 160 years. The variation as observed inA. magnifica subsp.magnifica was discontinuous and could be due to a broad species concept.
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    URL: http://dx.doi.org/10.1007/BF00985223
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    Sympodial and monopodial branching inAcer (Aceraceae): Evolutionary trend and ecological implications (1990)
    Springer
    Plant systematics and evolution 171 (1990), S. 187-197 
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    ISSN: 1615-6110
    Keywords: Angiosperms ; Aceraceae ; Acer ; Sympodial and monopodial branching ; evolution ; adaptive strategy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The evolutionary trend and its ecological implications in sympodial and monopodial branching patterns has been investigated in 20 JapaneseAcer spp. through comparison of shoot tip abortion and terminal bud formation. The genus is divided into two species groups according to its branching pattern, one (6 species) predominantly exhibiting sympodial branching with frequent monopodial branching in short shoots (sympodial species), and the other (14 species) exhibiting only monopodial branching (monopodial species). The early ontogeny of leaf and bud scales is described. Despite the difference in branching patterns, the bud scales of terminal buds are essentially the same in having a leaf base developed to function as a protecting organ. In all the sympodial species, during the abortion of a sympodium shoot tip, one or two pairs of primordia were found to occur on the apex, and later wither. These primordia resemble bud scales of terminal buds in their ontogeny and morphology, and appear to be rudimentary. It is suggested that a rudimentary terminal bud develops together with the establishment of sympodial branching, and that sympodial branching has originated from monopodial branching. Based on this proposed evolutionary trend, it is suggested thatAcer has moved from less shady habitats into shady habitats with monopodial branching (advantageous for vertical growth) changing into sympodial branching (advantageous for lateral spread).
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    Genetic divergence and introgressive hybridization betweenAlnus sinuata andA. crispa (Betulaceae) (1990)
    Springer
    Plant systematics and evolution 170 (1990), S. 107-124 
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    ISSN: 1615-6110
    Keywords: Angiosperms ; Betulaceae ; Alnus ; Isozymes ; population genetics ; hybridization ; genetic distance ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The actinorhizal genusAlnus contains numerous taxa that have been morphologically classified into different subgenera, species and subspecies. The genetic divergence has been evaluated within subg.Alnobetula between the parapatric taxaAlnus sinuata andA. crispa, using diversity of allozyme markers at 15 structural loci among 20 populations. Evidence for introgressive hybridization at the overlap of their ranges was noted in three populations. However, the width of the hybrid zone appeared tenuous. The average genetic distance derived from the comparisons of conspecific populations was much smaller than the interspecific distance (D = 0.047). This allelic divergence was also paralleled with larger amounts of allelic and genotypic diversity within and among populations ofA. sinuata, which are occupying a more heterogenous ecological niche. It is proposed that the repeated advances and retreats of the ice sheet during the Pleistocene may have promoted the divergence and allopatric evolution of these subspecies, and that secondary contact may have occurred repeatedly during the interglacial periods. The dynamic-equilibrium model would predict in such cases that narrow hybrid zones, formed at the contact of parapatric ranges, would impede gene exchange between parental taxa by selection against hybrids. The results obtained in this study seemed concordant with this hypothesis, as they were also in agreement with the existent taxonomical treatment of these taxa based on morphology.
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    URL: http://dx.doi.org/10.1007/BF00937853
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    A phylogenetic analysis of chloroplast DNA restriction site variation inPoaceae subfam.Pooideae (1990)
    Springer
    Plant systematics and evolution 172 (1990), S. 83-97 
    Details
    ISSN: 1615-6110
    Keywords: Angiosperms ; Poaceae ; Pooideae ; Phylogenetics ; evolution ; chloroplast DNA ; restriction site variation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A phylogenetic analysis was conducted on chloroplast DNA restriction site variation in 34 genera of grasses (familyPoaceae), including 28 genera from subfam.Pooideae (representing tribesAveneae, Brachypodieae, Bromeae, Meliceae, Poeae, Stipeae, andTriticeae) and representatives of three other subfamilies,Arundinoideae, Oryzoideae, andPanicoideae. Analyses of all 34 genera always distinguishedPooideae as monophyletic, regardless of which nonpooid genus functioned as outgroup; six separate analyses of all 28 pooid genera, each including one of the six nonpooid genera as outgroup, resolved five identically-constituted clades withinPooideae (in four cases), or (in the other two cases) yielded results that were less well resolved, but not in conflict with those of the other four analyses. The four best-resolved analyses distinguishedMeliceae as the earliest diverging lineage withinPooideae, andStipeae as the next. Above the point of divergence ofStipeae is a dichotomy between supertribeTriticodae (including tribesBrachypodieae, Bromeae, andTriticeae), and a clade comprisingPoeae andAveneae. The analysis supports some tribal realignments, specifically the assignment ofBriza, Chascolytrum, Microbriza, andTorreyochloa toAveneae, andArctagrostis, Catabrosa, andSesleria toPoeae. The analysis also suggests that the pooid spikelet (i.e., glumes shorter than lemmas and florets two or more) is plesiomorphic inPooideae, and that spikelets with one floret, and those with glumes longer than the first lemma, each have evolved more than once withinPooideae. Results also indicate that small chromosomes and chromosome numbers based on x=c. 10−12 are plesiomorphic withinPooideae. Alternative states of these characters (chromosomes large, chromosome numbers based on x=7) are interpreted as synapomorphies or parallelisms of clades that includeTriticodae, Aveneae, andPoeae. Lanceolate lodicule shape may be a synapomorphy of the clade that includesStipeae, Triticodae, Aveneae, andPoeae, and loss of lodicule vascularization a synapomorphy of the entirePooideae.
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    Evolution of the tetraploidCapsella bursa-pastoris (Brassicaceae): Isoelectric focusing analysis of Rubisco (1990)
    Springer
    Plant systematics and evolution 172 (1990), S. 205-213 
    Details
    ISSN: 1615-6110
    Keywords: Angiosperms ; Brassicaceae ; Capsella ; Ribulose-1,5-bisphosphate carboxylase/oxygenase ; isoelectric focusing ; evolution ; polyploidization
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco, EC 4.1.1.39) and its subunits (large subunits = LSU, small subunits = SSU) were isolated from threeCapsella spp. by gel electrophoresis and polypeptide composition was analyzed by isoelectric focusing (IEF) in the presence of 8M urea. The described techniques are recommended for large scale systematic studies. Multiple IEF banding patterns of the SSU are probably the outcome of a heterogenous multigene family. The two diploid speciesC. rubella andC. grandiflora show an identical IEF pattern and could be differentiated from the putative allotetraploidC. bursa-pastoris only by the SSU banding pattern. Uniqueness of some SSU bands in the tetraploid and in the two diploid species, respectively, may indicate an ancient alloploid origin of tetraploidC. bursa-pastoris followed by events leading to divergences in the genomes of the allotetraploid and its presumed diploid progenitors after the hybridization event (SSU gene elimination, acquisition of new SSU genes).
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    URL: http://dx.doi.org/10.1007/BF00937807
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    The behaviour of the autonomous maize transposable element En/Spm in Arabidopsis thaliana allows efficient mutagenesis (1998)
    Springer
    Plant molecular biology 37 (1998), S. 989-999 
    Details
    ISSN: 1573-5028
    Keywords: Arabidopsis thaliana ; transposable element ; En-1 ; mutagenesis ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The behavior of the autonomous maize transposable element En/Spm of maize was studied in Arabidopsis. Transgenic Arabidopsis plants carrying En-1 elements were propagated for 12 generations using a single seed descent procedure. The distribution and activity of the En-1 element was monitored using Southern DNA hybridisations in generations 1, 6 and 12. In the first generation the highest number of En-1 insertions per line was 7, which increased to 20 in generation 12. The average number of En-1 insertions increased only slightly in the population, due to a gradual accumulation of segregants that lost the transposable element. During the development of the En-1 mutagenised population the element remained active even in the high-copy lines. In situ hybridisation demonstrated that multiple En-1 insertions were distributed over all Arabidopsis chromosomes. From the initial En-1 mutagenised populations many unstable gene mutations were recovered, indicating that En-1 can be used as a efficient tool for gene tagging in Arabidopsis.
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    URL: http://dx.doi.org/10.1023/A:1006082009151
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    Macromolecular organization and genetic mapping of a rapidly evolving chromosome-specific tandem repeat family (B77) in cotton (Gossypium) (1998)
    Springer
    Plant molecular biology 38 (1998), S. 1031-1041 
    Details
    ISSN: 1573-5028
    Keywords: evolution ; fluorescence in situ hybridization (FISH) ; genome ; repetitive DNA
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Isolation and characterization of the most prominent repetitive element families in the genome of tetraploid cotton (Gossypium barbadense L; [39]) revealed a small subset of families that showed very different properties in tetraploids than in their diploid progenitors, separated by 1-2 million years. One element, B77, was characterized in detail, and compared to the well-conserved 5S and 45S rRNA genes. The 572 bp B77 repeat was found to be concentrated in several discontinuous tandem arrays confined to a single 550 kb SalI fragment in tetraploid cotton. Genetic mapping based on the absence of the pentameric ‘rung’ in the G. barbadense ‘ladder’ showed that B77 maps to a D-subgenome chromosome. In situ hybridization supports the contention that the array is confined largely to a single chromosomal site in the D-subgenome. The B77 repeat has undergone a substantial increase in copy number since formation of tetraploid cotton from its diploid relatives. RFLPs observed among tetraploid cotton species suggest that amplification and/or rearrangement of the repeat may have continued after divergence of the five tetraploid cotton species. B77 contains many short direct repeats and shares significant DNA sequence homology with a Nicotiana alata retrotransposon Tna1-2 integrase motif. The recent amplification of B77 on linkage group D04 suggests that the D-subgenome of tetraploid cotton may be subject to different evolutionary constraints than the D-genome diploid chromosomes, which exhibit few genome-specific elements. Further, the abundance of B77 in G. gossypioides supports independent evidence that it may be the closest extant relative of the D-genome ancestor of cotton.
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    URL: http://dx.doi.org/10.1023/A:1006073116627
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    Properties and functions of the cyanogenic system in higher plants (1990)
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    Euphytica 48 (1990), S. 25-43 
    Details
    ISSN: 1573-5060
    Keywords: Cultivated plants ; wild plants ; cyanogenesis ; ecology ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Summary Cyanogenesis, the production of HCN is a trait that can be found in all the major taxa. The system is particularly important in higher plants, both in view of the specialized mechanisms found in plants and with regard to the physiological and ecological function of HCN production. The present paper discusses the long history of cyanogenic research, the distribution of the cyanogenic substances among the taxa of higher plants, their localisation in the plant organs and their biosynthetic pathways. The same topics are discussed with regard to the specialized β-glucosidases found in plants that play a role in the catabolism of the cyanogenic substances and in HCN production. The physiological and ecological functions of the cyanogenic systems are discussed with emphasis on the few species studied so far that are polymorphic, i.e. contain cyanogenic and acyanogenic individuals in the same population. Although research in this area is still in its infanthood, it is clear that cyanogenesis is part of a complex system that among others, gives protection against particular groups of herbivores. Apparently the defensive system is under some kind of constraint, developmental, selectional, or both, that prevents plants from having an absolute defense against herbivores. One such constraint viz. a negative effect of the cyanogenic system on growth and/or reproduction is discussed in some length. A number of cultivated species, i.e. cassava (Manihot esculenta), sorghum (Sorghum spp) and lima bean (Phaseolus lunatus) to mention a few, are cyanogenic. Cyanogenesis in species used for human or lifestock consumption is generally considered an undesirable trait. On the other hand low levels of cyanogenesis may cause greater susceptibility to herbivores and consequently lower the yield. Apparently cyanogenesis is a character of interest for plant breeders trying to improve cyanogenic species.
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    URL: http://dx.doi.org/10.1007/BF00028958
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    The importance of Endosperm Balance Number in potato breeding and the evolution of tuber-bearing Solanum species (1992)
    Springer
    Euphytica 60 (1992), S. 105-113 
    Details
    ISSN: 1573-5060
    Keywords: bridging crosses ; chromosome addition lines ; Endosperm Balance Number ; evolution ; 2n gametes ; imprinting ; interspecific crosses ; ploidy manipulations ; tuber-bearing Solanum species
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Summary Endosperm failure is considered the primary reason for the lack of success in intra-and interspecific crosses. The Endosperm Balance Number (EBN) hypothesis is a unifying concept for predicting endosperm function in intraspecific, interploidy, and interspecific crosses. In the EBN system, every species has an ‘effective ploidy’ (EBN), which must be in a 2:1 maternal to paternal ratio in the endosperm for crosses to succeed. The knowledge of EBN is very useful in the transfer of genes from exotic germplasm, and in the development of new breeding schemes in potato. The paper describes the strategies for introducing 2x(1EBN), 2x(2EBN), 4x(2EBN) and 6x(4EBN) germplasm into the cultivated 4x(4EBN) potato gene pool. A new methodology for producing 4x(4EBN) and 2x(2EBN) chromosome addition lines is also discussed. EBN has evolutionary importance in the origin of tuber-bearing Solanums. The role of the EBN in the origin of diploid and polyploid potato species, and as a barrier for hybridization and speciation of sympatric species within the same ploidy level is demonstrated. The origin of 3x and 5x cultivated tuber-bearing Solanums may also be explained using the EBN concept. EBN has been reported to exist in other plant species: alfalfa, beans, blueberries, rice, soybeans, squashes, tomato, forage legumes, grasses, ornamentals and Datura stramonium. This indicates that EBN may have broad application and could be useful for germplasm transfer and breeding in other crop species.
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    Light, iron, Sam Granick and the origin of life (1992)
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    Photosynthesis research 33 (1992), S. 163-170 
    Details
    ISSN: 1573-5079
    Keywords: biosynthetic pathway ; evolution ; free energy ; photochemistry ; photosynthesis ; porphyrin
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Living matter is an organized system which requires a continual flux of energy for its survival. As a working assumption, the flux of energy required for the origin of a self-duplicating cell is taken as the power required for the maintenance of a modern cell: 10 mW per g of carbon or some 105 times the output per gram of the sun. Solar photochemistry supplies the energy for the continuing evolution of life and, by continuity, for its origin. The iron oxide-sulfide photosynthetic unit proposed by S. Granick 35 years ago was meant to supply this energy. The evolution of complex organic photosensitizers is rationalized by the Granick hypothesis that biosynthetic pathways recapitulate their evolution. These concepts are discussed in the context of the evolution of photosynthetic systems and the known properties of these pigments.
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    Protein sequences and redox titrations indicate that the electron acceptors in reaction centers from heliobacteria are similar to Photosystem I (1992)
    Springer
    Photosynthesis research 32 (1992), S. 11-22 
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    ISSN: 1573-5079
    Keywords: iron-sulfur centers ; evolution ; green sulfur bacteria ; bacteriochlorophyll g
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Photosynthetic reaction centers isolated from Heliobacillus mobilis exhibit a single major protein on SDS-PAGE of 47 000 Mr. Attempts to sequence the reaction center polypeptide indicated that the N-terminus is blocked. After enzymatic and chemical cleavage, four peptide fragments were sequenced from the Heliobacillus mobilis apoprotein. Only one of these sequences showed significant specific similarity to any of the protein and deduced protein sequences in the GenBank data base. This fragment is identical with 56% of the residues, including both cysteines, found in the highly conserved region that is proposed to bind iron-sulfur center FX in the Photosystem I reaction center peptide that is the psaB gene product. The similarity to the psaA gene product in this region is 48%. Redox titrations of laser-flash-induced photobleaching with millisecond decay kinetics on isolated reaction centers from Heliobacterium gestii indicate a midpoint potential of −414 mV with n=2 titration behavior. In membranes, the behavior is intermediate between n=1 and n=2, and the apparent midpoint potential is −444 mV. This is compared to the behavior in Photosystem I, where the intermediate electron acceptor A1, thought to be a phylloquinone molecule, has been proposed to undergo a double reduction at low redox potentials in the presence of viologen redox mediators. These results strongly suggest that the acceptor side electron transfer system in reaction centers from heliobacteria is indeed analogous to that found in Photosystem I. The sequence similarities indicate that the divergence of the heliobacteria from the Photosystem I line occurred before the gene duplication and subsequent divergence that lead to the heterodimeric protein core of the Photosystem I reaction center.
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    Phylogenetic relationships of phylum Rotifera with emphasis on the families of Bdelloidea (1998)
    Springer
    Hydrobiologia 287-388 (1998), S. 101-107 
    Details
    ISSN: 1573-5117
    Keywords: Acanthocephala ; aschelminthes ; cladistics ; evolution ; Gnathostomulida ; phylogeny ; pseudocoelomates ; Rotifera
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract We investigated phylogenetic relationships of phylum Rotifera using cladistic analysis to uncover all most-parsimonious trees from a data set comprising 60 morphological characters of nine taxa: one Acanthocephala, six Rotifera, and two outgroups (Turbellaria, Gnathostomulida). Analysis of our matrix yielded a single most-parsimonious tree. From our analysis we conclude the following: (1) Class Digononta is paraphyletic; (2) it is still premature to reject rotiferan monophyly; (3) the classification hierarchy that best conforms to this morphologically based, cladistic analysis is similar to several traditional schemes. In spite of these results, it is significant that this analysis yielded a tree that is incongruent with those trees developed from molecular data or by using the principles of evolutionary taxonomy.
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    Cross-mating tests re-discovered: a tool to assess species boundaries in rotifers (1998)
    Springer
    Hydrobiologia 287-388 (1998), S. 109-115 
    Details
    ISSN: 1573-5117
    Keywords: behavior ; mating ; evolution ; taxonomy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The recent isolation of a mate recognition pheromone in the marine rotifer Brachionus plicatilis Müller has shed new light on the mate recognition system of rotifers. One result is improved understanding of the importance of mating behavior as a highly efficient process used by rotifers to choose conspecifics. There are many differences in the main characteristics of mating behavior in members of five different families of rotifers. The present work describes the use of these characteristics to assess species boundaries, especially where boundaries between two or more species are unclear. The method proposed here can assess quantitatively the response of males of one species to females of a questionable taxon by measuring the percentage of matings initiated and the number of completed copulations. The data generated can then be used together with molecular, morphological, and other data to determine the species boundaries. This approach can help distinguish between morphological differences resulting from evolutionary divergence of species and morphological differences induced by environmental or ecological factors.
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    URL: http://dx.doi.org/10.1023/A:1017005602735
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    Cross-mating tests re-discovered: a tool to assess species boundaries in rotifers (1998)
    Springer
    Hydrobiologia 387-388 (1998), S. 109-115 
    Details
    ISSN: 1573-5117
    Keywords: behavior ; mating ; evolution ; taxonomy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The recent isolation of a mate recognition pheromone in the marine rotifer Brachionus plicatilis Müller has shed new light on the mate recognition system of rotifers. One result is improved understanding of the importance of mating behavior as a highly efficient process used by rotifers to choose conspecifics. There are many differences in the main characteristics of mating behavior in members of five different families of rotifers. The present work describes the use of these characteristics to assess species boundaries, especially where boundaries between two or more species are unclear. The method proposed here can assess quantitatively the response of males of one species to females of a questionable taxon by measuring the percentage of matings initiated and the number of completed copulations. The data generated can then be used together with molecular, morphological, and other data to determine the species boundaries. This approach can help distinguish between morphological differences resulting from evolutionary divergence of species and morphological differences induced by environmental or ecological factors.
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    URL: http://dx.doi.org/10.1023/A:1017005602735
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    Phylogenetic relationships of phylum Rotifera with emphasis on the families of Bdelloidea (1998)
    Springer
    Hydrobiologia 387-388 (1998), S. 101-107 
    Details
    ISSN: 1573-5117
    Keywords: Acanthocephala ; aschelminthes ; cladistics ; evolution ; Gnathostomulida ; phylogeny ; pseudocoelomates ; Rotifera
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract We investigated phylogenetic relationships of phylum Rotifera using cladistic analysis to uncover all most-parsimonious trees from a data set comprising 60 morphological characters of nine taxa: one Acanthocephala, six Rotifera, and two outgroups (Turbellaria, Gnathostomulida). Analysis of our matrix yielded a single most-parsimonious tree. From our analysis we conclude the following: (1) Class Digononta is paraphyletic; (2) it is still premature to reject rotiferan monophyly; (3) the classification hierarchy that best conforms to this morphologically based, cladistic analysis is similar to several traditional schemes. In spite of these results, it is significant that this analysis yielded a tree that is incongruent with those trees developed from molecular data or by using the principles of evolutionary taxonomy.
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    URL: http://dx.doi.org/10.1023/A:1017057619574
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    Deleterious mutations in animal mitochondrial DNA (1998)
    Springer
    Genetica 102-103 (1998), S. 61-69 
    Details
    ISSN: 1573-6857
    Keywords: neutral theory ; slightly deleterious ; evolution ; mutations ; mitochondrial DNA
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A simple neutral model predicts that the ratio of non-synonymous to synonymous fixed differences between species will be the same as the ratio of non-synonymous to synonymous polymorphisms within species. This prediction is tested with existing mitochondrial datasets from 25 animal species. In slightly over half of the studies, the ratio of replacement to silent polymorphisms within species is significantly greater than the ratio of replacement to silent fixed differences between species. These observations are best explained by a substantial number of mildly deleterious amino acid mutations that contribute to heterozygosity but rarely become fixed.
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    URL: http://dx.doi.org/10.1023/A:1017030708374
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    Inferences on genome-wide deleterious mutation rates in inbred populations of Drosophila and mice (1998)
    Springer
    Genetica 102-103 (1998), S. 229-239 
    Details
    ISSN: 1573-6857
    Keywords: evolution ; fertility ; natural selection ; population genetics ; viability
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A theoretical analysis was carried out on the mutation load observed in long-maintained inbred lines from two experiments with Drosophila and mice. The rate of decline in fitness and its sampling distribution were predicted for both experiments using Monte Carlo simulation with a range of mutational parameters and models. The predicted rates of change in fitness were compared to the empirical observed rates, which were close to zero. The classical hypothesis of many deleterious mutations (about one event per genome per generation) of small effect (1–2%) resulting in a mutation pressure for fitness of about 1% per generation is incompatible with the data. Recent estimates suggesting an overall mutation pressure for fitness traits of about 0.1% are, however, compatible with the observed load.
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    URL: http://dx.doi.org/10.1023/A:1017050117885
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    Enigma of Y chromosome degeneration: Neo-Y and Neo-X chromosomes of Drosophila miranda a model for sex chromosome evolution (1998)
    Springer
    Genetica 102-103 (1998), S. 409-420 
    Details
    ISSN: 1573-6857
    Keywords: Drosophila ; evolution ; sex chromosomes ; Y chromosome degeneration ; Y chromosome mutations
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Y chromosome degeneration is characterized by structural changes in the chromosome architecture and expansion of genetic inertness along the Y chromosome. It is generally assumed that the heteromorphic sex chromosome pair has developed from a pair of homologues. Several models have been suggested. We use the unique situation of the secondary sex chromosome pair, neo-Y and neo-X (X2), in Drosophila miranda to analyze molecular mechanisms involved in the evolutionary processes of Y chromosome degeneration. Due to the fusion of one of the autosomes to the Y chromosome (about 2 Mya), a neo-Y chromosome and a neo-X chromosome, designated X2, were formed. Thus, formerly autosomal genes are inherited now on a pair of sex chromosomes in D. miranda. Analyzing DNA sequences from the X2 and neo-Y region, we observed a massive accumulation of DNA insertions on the neo-Y chromosome. From the analysis of several insertion elements, we present compelling evidence that the first step in Y chromosome degeneration is driven by the accumulation of transposable elements, especially retrotransposons. An enrichment of these elements along an evolving Y chromosome could account for the switch from a euchromatic into a heterochromatic chromatin structure.
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    URL: http://dx.doi.org/10.1023/A:1017058119760
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    Quantitative nuclear DNA differences associated with genome evolution in Guizotia (Compositae) (1992)
    Springer
    Genetica 85 (1992), S. 241-247 
    Details
    ISSN: 1573-6857
    Keywords: Compositae ; DNA amount ; evolution ; Guizotia ; karyotype
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The present communication deals with 2C nuclear genome size variation in a fairly small genus Guizotia. Twenty-four accessions belonging to six species, out of seven known, were analysed in order to elucidate the extent of DNA variation both at an intra—as well as interspecific level. At the intraspecific level none of the species exhibited significant differences in their genome size. Between the species, the 2C DNA amounts ranged from 3.61 pg in G. reptans to 11.37 pg in G. zavattarii; over three-fold DNA variation is evident. Apparently these interspecific DNA differences have been achieved independent of the numerical chromosomal change(s), as all the Guizotias share a common chromosome number 2n=2x=30. The cultivated oilseed crop, G. abyssinica (7.57 pg), has accommodated nearly 78% extra DNA in its chromosome complement during the evolutionary time scale of its origin and domestication from the wild progenitor G. schimperi (4.25 pg). The extent of genomic DNA difference(s) between the species has been discussed in the light of their interrelationships and diversity.
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    URL: http://dx.doi.org/10.1007/BF00132276
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    Ty1-copia group retrotransposons and the evolution of retroelements in the eukaryotes (1992)
    Springer
    Genetica 86 (1992), S. 203-214 
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    ISSN: 1573-6857
    Keywords: Copia ; Ty element ; evolution ; retrotransposon
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Ty1-copia group retrotransposons are among the best studied transposable elements in the eukaryotes. This review discusses the extent of these transposons in the eukaryote kingdoms and compares models for the evolution of these genetic elements in the light of recent phylogenetic data. These data show that the Ty1-copia group is widespread among invertebrate eukaryotes, especially in the higher plant kingdom, where these genetic elements are unusually common and heterogeneous in their sequence. The phylogenetic data also suggest that the present day spectrum of Ty1-copia group retrotransposons has been influenced both by divergence during vertical transmission down evolving lineages and by horizontal transmission between distantly related species. Lastly, the factors affecting Ty1-copia group retrotransposon copy number and sequence heterogeneity in eukaryotic genomes and the effects of transpositional quiescence and defective retrotransposons upon evolution of Ty1-copia group retrotransposons are discussed.
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    URL: http://dx.doi.org/10.1007/BF00133721
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    Genetic basis of multidrug resistance of tumor cells (1990)
    Springer
    Journal of bioenergetics and biomembranes 22 (1990), S. 593-618 
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    ISSN: 1573-6881
    Keywords: Chemotherapy ; ATP ; drug transport ; colchicine ; actinomycin D ; doxorubicin ; vinblastine ; vincristine ; introns ; evolution ; P-glycoprotein ; transmembrane domains ; MDR1 gene
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Physics
    Notes: Abstract Multidrug resistance in animal cells is defined as the simultaneous resistance to a variety of compounds which appear to be structurally and mechanistically unrelated. One type of multidrug resistance is characterized by the decreased accumulation of hydrophobic natural product drugs, a phenotype which is mediated by an ATP-dependent integral membrane multidrug transporter termed P-glycoprotein or P170. The gene coding for P170 is calledMDR. The nucleotide-binding domain of P-glycoprotein shares sequence homology with a family of bacterial permease ATP-binding components. In addition, P170 as a whole is structurally very similar to a number of prokaryotic and eukaryotic proteins believed to be involved in transport activities. This review summarizes our current knowledge of the molecular biology and clinical significance ofMDR expression and P-glycoprotein transport activity, as well as some theories about the function of this protein in normal cells.
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    URL: http://dx.doi.org/10.1007/BF00762963
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    Evolution of structure and function of V-ATPases (1992)
    Springer
    Journal of bioenergetics and biomembranes 24 (1992), S. 415-424 
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    ISSN: 1573-6881
    Keywords: ATPases ; evolution ; eukaryotes ; endomembranes ; archaebacteria ; progenote ; bioenergetics ; flagella assembly ; endosymbiont theory
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Physics
    Notes: Abstract Proton pumping ATPases/ATPsynthases are found in all groups of present-day organisms. The structure of V- and F-type ATPases/ATP synthases is very conserved throughout evolution. Sequence analysis shows that the V- and F-type ATPases evolved from the same enzyme already present in the last common ancestor of all known extant life forms. The catalytic and noncatalytic subunits found in the dissociable head groups of the V/F-type ATPases are paralogous subunits, i.e., these two types of subunits evolved from a common ancestral gene. The gene duplication giving rise to these two genes (i.e., encoding the catalytic and noncatalytic subunits) predates the time of the last common ancestor. Mapping of gene duplication events that occurred in the evolution of the proteolipid, the noncatalytic and the catalytic subunits, onto the tree of life leads to a prediction for the likely subunit structure of the encoded ATPases. A correlation between structure and function of V/F-ATPases has been established for present-day organisms. Implications resulting from this correlation for the bioenergetics operative in proto-eukaryotes and in the last common ancestor are presented. The similarities of the V/F-ATPase subunits to an ATPase-like protein that was implicated to play a role in flagellar assembly are evaluated. Different V-ATPase isoforms have been detected in some higher eukaryotes. These data are analyzed with respect to the possible function of the different isoforms (tissue specific, organelle specific) and with respect to the point in their evolution when these gene duplications giving rise to the isoforms had occurred, i.e., how far these isoforms are distributed.
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    URL: http://dx.doi.org/10.1007/BF00762534
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    From NO to OO: Nitric Oxide and Dioxygen in Bacterial Respiration (1998)
    Springer
    Journal of bioenergetics and biomembranes 30 (1998), S. 15-24 
    Details
    ISSN: 1573-6881
    Keywords: Cytochrome oxidase ; nitric oxide reductase ; respiration ; denitrification ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Physics
    Notes: Abstract Nitric oxide reductase (NOR) is a key enzyme in denitrification, reforming the N–N bond (making N2O from two NO molecules) in the nitrogen cycle. It is a cytochrome bc complex which has apparently only two subunits, NorB and NorC. It contains two low-spin cytochromes (c and b), and a high-spin cytochrome b which forms a binuclear center with a non-heme iron. NorC contains the c-type heme and NorB can be predicted to bind the other metal centers. NorB is homologous to the major subunit of the heme/copper cytochrome oxidases, and NOR thus belongs to the superfamily, although it has an Fe/Fe active site rather than an Fe/Cu binuclear center and a different catalytic activity. Current evidence suggests that NOR is not a proton pump, and that the protons consumed in NO reduction are not taken from the cytoplasmic side of the membrane. Therefore, the comparison between structural and functional properties of NOR and cytochrome c- and quinol-oxidizing enzymes which function as proton pumps may help us to understand the mechanism of the latter. This review is a brief summary of the current knowledge on molecular biology, structure, and bioenergetics of NOR as a member of the oxidase superfamily.
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    URL: http://dx.doi.org/10.1023/A:1020547225398
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    Phylogenetic Relationships Between the Orders Artiodactyla and Cetacea: A Combined Assessment of Morphological and Molecular Evidence (1998)
    Springer
    Journal of mammalian evolution 5 (1998), S. 127-182 
    Details
    ISSN: 1573-7055
    Keywords: Artiodactyla ; hippopotamuses ; Cetacea ; morphology ; cytochrome b ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A character analysis of selected conservative morphological traits from extant and fossil artiodactyls and cetaceans was combined with a similar analysis of conservative nucleotide positions from the complete mitochondrial cytochrome b sequences of available extant artiodactyls, cetaceans, sirenians, perissodactyls, and other mammals. This combined analysis focuses on the evidence that supports conflicting hypotheses of artiodactyl monophyly, including the affinities of hippopotamids and the monophyly or paraphyly of odontocete cetaceans. Highly conserved morphological traits of the astragalus and deciduous dentition provide strong corroboration of artiodactyl monophyly, including extant and fossil hippopotamids. In contrast, cytochrome b gene sequences are incapable of confirming this monophyly, due to excessive homoplasy of nucleotide and amino acid traits within extant Eutheria. In like manner, highly conserved and uniquely derived morphological features of the skull and auditory regions provide robust corroboration of Odontoceti monophyly, including extant and fossil physeteroids. Several nucleotide similarities do exist between physeteroids and mysticetes; however, most are either silent third-position transversions or occur also in two or more odontocete families. We suggest that increased taxon sampling, combined with functional considerations of amino acids and their secondary structure in protein-coding genes, are essential requirements for the phylogenetic interpretations of molecules at higher taxonomic levels, especially when they conflict with well-supported hypotheses of mammalian phylogeny, corroborated by uniquely derived morphological traits from extant and fossil taxa.
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    URL: http://dx.doi.org/10.1023/A:1020501622015
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    The Inner Ear of Two Late Cretaceous Multituberculate Mammals, and Its Implications for Multituberculate Hearing (1998)
    Springer
    Journal of mammalian evolution 5 (1998), S. 65-93 
    Details
    ISSN: 1573-7055
    Keywords: Multituberculata ; inner ear ; cochlea ; semicircular canals ; hearing ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The inner ear of the Late Cretaceous multituberculates Nemegtbaatar gobiensis and Chulsan-baatar vulgaris is described from serial sections and enlarged models. The size and proportions of the inner ear as a whole are as expected for extant small mammals. The lengths of the cochlea (Nemegtbaatar gobiensis, 3.0 mm, Chulsanbaatar vulgaris, 2.0 mm) are comparable to those of other multituberculates, when ratios of length of the cochlea to skull length are calculated. The vestibule is not as expanded in the two taxa as in Lambdopsalis, ?Meniscoessus, and ?Catopsalis; the estimated volume for Nemegtbaatar gobiensis is 9 mm3. A slightly laterally curved, anteriomedially directed cochlea, relatively robust ear ossicles, and the estimations of the area of the tympanic membrane and stapedial footplate in Chulsanbaatar suggest high-frequency hearing but a relatively low sensitivity to low-decibel sounds. The semicircular canals of Nemegtbaatar and Chulsanbaatar are fully developed; the size of the anterior, posterior, and lateral canals and their angles and proportions are comparable to those of extant mammals of similar size. The anterior semicircular canal of Nemegtbaatar forms a smooth half-circle and thus is more derived than the angular canal of Ornithorhynchus. The notable differences between the ratio of the width of the lateral semicircular canal to skull length and the size of the vestibule in Nemegtbaatar and the Paleocene multituberculate Lambdopsalis bulla are probably related to different modes of life.
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    URL: http://dx.doi.org/10.1023/A:1020571003901
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    An Evolutionary Solution to Anesthesia Automated Record Keeping (1998)
    Springer
    Journal of clinical monitoring and computing 14 (1998), S. 421-424 
    Details
    ISSN: 1573-2614
    Keywords: Automated record keeper ; evolution ; management of risk ; object-oriented
    Source: Springer Online Journal Archives 1860-2000
    Topics: Computer Science , Medicine
    Notes: Abstract In the course of five years the development of an automated anesthesia record keeper has evolved through nearly a dozen stages, each marked by new features and sophistication. Commodity PC hardware and software minimized development costs. Object oriented analysis, programming and design supported the process of change. In addition, we developed an evolutionary strategy that optimized motivation, risk management, and maximized return on investment. Besides providing record keeping services, the system supports educational and research activities and through a flexible plotting paradigm, supports each anesthesiologist's focus on physiological data during and after anesthesia.
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    URL: http://dx.doi.org/10.1023/A:1009927928593
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    Evolution of competitive fitness in experimental populations of E. coli: What makes one genotype a better competitor than another? (1998)
    Springer
    Antonie van Leeuwenhoek 73 (1998), S. 35-47 
    Details
    ISSN: 1572-9699
    Keywords: cell size ; competition ; evolution ; fitness ; nutrient specificity ; selection
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract An important problem in microbial ecology is to identify those phenotypic attributes that are responsible for competitive fitness in a particular environment. Thousands of papers have been published on the physiology, biochemistry, and molecular genetics of Escherichia coli and other bacterial models. Nonetheless, little is known about what makes one genotype a better competitor than another even in such well studied systems. Here, we review experiments to identify the phenotypic bases of improved competitive fitness in twelve E. coli populations that evolved for thousands of generations in a defined environment, in which glucose was the limiting substrate. After 10000 generations, the average fitness of the derived genotypes had increased by ∼ 50% relative to the ancestor, based on competition experiments using marked strains in the same environment. The growth kinetics of the ancestral and derived genotypes showed that the latter have a shorter lag phase upon transfer into fresh medium and a higher maximum growth rate. Competition experiments were also performed in environments where other substrates were substituted for glucose. The derived genotypes are generally more fit in competition for those substrates that use the same mechanism of transport as glucose, which suggests that enhanced transport was an important target of natural selection in the evolutionary environment. All of the derived genotypes produce much larger cells than does the ancestor, even when both types are forced to grow at the same rate. Some, but not all, of the derived genotypes also have greatly elevated mutation rates. Efforts are now underway to identify the genetic changes that underlie those phenotypic changes, especially substrate specificity and elevated mutation rate, for which there are good candidate loci. Identification and subsequent manipulation of these genes may provide new insights into the reproducibility of adaptive evolution, the importance of co-adapted gene complexes, and the extent to which distinct phenotypes (e.g., substrate specificity and cell size) are affected by the same mutations.
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    URL: http://dx.doi.org/10.1023/A:1000675521611
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    Arcelin in wild bean (Phaseolus vulgaris L.) seeds: sequence of arcelin 6 shows it is a member of the arcelins 1 and 2 subfamily (1998)
    Springer
    Genetic resources and crop evolution 45 (1998), S. 383-388 
    Details
    ISSN: 1573-5109
    Keywords: arcelin ; common bean ; evolution ; lectin-related genes ; lectin-related proteins ; Phaseolus genus
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Arcelins are lectin-related proteins detected only in wild beans collected in Mexico and their presence has been related to resistance against the bean weevils. Six arcelin variants have been described and the gene sequence of four of them was determined. We have isolated and sequenced a cDNA clone encoding arcelin 6. Sequence data indicated that this protein is closely related to arcelin 1 and arcelin 2. The cluster dendrogram produced with the multiple alignment of the cDNA clones coding for arcelins showed that arcelins can be divided into three subgroups: i) arcelin 1, arcelin 2 and arcelin 6, ii) arcelin 4 and iii) arcelin 5a and arcelin 5b. Biochemical data indicate that arcelin 3 belongs to the same subgroup of arcelin 4. Southern blot analysis of genomic DNA yielded similar restriction patterns among members of each subgroup, confirming the results obtained with the multiple alignment. Furthermore, the hybridisation patterns were specific for each arcelin variant. On the basis of these evidences, we suggest that the lectin locus could be a useful tool for understanding evolutionary relationships in common bean and in the genus Phaseolus.
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    URL: http://dx.doi.org/10.1023/A:1008682917192
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    The Cuban homegarden ‘conuco’: a perspective environment for evolution and in situ conservation of plant genetic resources (1992)
    Springer
    Genetic resources and crop evolution 39 (1992), S. 9-22 
    Details
    ISSN: 1573-5109
    Keywords: Cuba ; evolution ; genetic resources ; homegarden ; in situ conservation ; landraces
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Summary Cuban homegardens are called ‘conucos’. On the basis of new case studies additional information is provided about these ‘conucos’, their history, composition and importance. They and other gardens of similar type are characterized as suitable environment for in situ conservation and for the continuation of evolutionary processes.
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    Genetic variation vis-à-vis molecular polymorphism in groundnut, Arachis hypogaea L. (1998)
    Springer
    Genetic resources and crop evolution 45 (1998), S. 119-126 
    Details
    ISSN: 1573-5109
    Keywords: Arachis hypogaea ; DNA markers ; molecular polymorphism ; variation ; origin ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Recent studies on the genus Arachis using molecular markers have revealed very little demonstrable polymorphism in the cultivated groundnut, A. hypogaea. This has led to the hasty generalization that the groundnut lacks genetic variation. However, this is in complete contradiction to the results of other lines of investigations into the origin and evolution of A. hypogaea. Further, a characterization of the world collection for various traits also shows significant levels of variation for almost all genetic traits. The literature review in this article suggests that the lack of genetic variation was inferred because of an inadequacy in the material studied, and the range of techniques used to study molecular polymorphism. A comprehensive and rigorous examination of the material available in the groundnut world collection, either by improving current techniques, or by using such advanced techniques as SSRs and AFLP could well reveal polymorphism at the molecular level.
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    URL: http://dx.doi.org/10.1023/A:1008646422730
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    A new species of Avena from Sicily, possibly the tetraploid progenitor of hexaploid oats (1998)
    Springer
    Genetic resources and crop evolution 45 (1998), S. 263-269 
    Details
    ISSN: 1573-5109
    Keywords: evolution ; interspecific hybridization ; taxonomy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract A new species of oat, Avena insularis, is described. It was collected in southern Sicily where four populations were found on uncultivated clay soil. Morphologically, it is similar to the hexaploid wild oat A. sterilis, but can be distinguished by its smaller and more condensed panicle, less V-shaped dispersal unit and oblong disarticulation scar. Hybrids between A. insularis and the hexaploid cultivated oat A. sativa were obtained only when the latter was the seed parent in crosses. Chromosome pairing of the hybrids at meiosis was irregular with univalents and multivalents, but the mean number of chiasmata per cell was close to that of A. insularis. Furthermore, the hybrids were partially self-fertile. Thus, the newly discovered species seems closer to the hexaploid oats than any other tetraploid species, and is probably the tetraploid progenitor of hexaploid oats. Hybrids between A. insularis and A. magna were sterile because of irregular chromosome pairing at meiosis.
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    URL: http://dx.doi.org/10.1023/A:1008657530466
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    The evolutionary relationships of rotifers and acanthocephalans (1998)
    Springer
    Hydrobiologia 287-388 (1998), S. 83-91 
    Details
    ISSN: 1573-5117
    Keywords: phylogeny ; acanthocephala ; rotifera ; bilateria ; evolution ; 18S rRNA gene
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Advances in morphological and molecular studies of metazoan evolution have led to a better understanding of the relationships among Rotifera (Monogononta, Bdelloidea, Seisonidea) and Acanthocephala, and their relationships to other bilateral animals. The most accepted morphological analysis places Acanthocephala as a sister group to Rotifera, although other studies have placed Acanthocephala as a sister taxon to Bdellodea or Seisonidea. Molecular analyses using nuclear 18S rRNA and mitochondrial 16S rRNA genes support Acanthocephala as a sister taxon to Bdelloidea, although no molecular data is available for Seisonidea. Combining molecular and morphological analyses of Bilateria leads to a tree with Platyhelminthes, Rotifera, Acanthocephala and Gnathostomulida (and probably Gastrotricha) as a sister group to the annelid-mollusc lineage of the Spiralia (Lophotrochozoa).
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1023/A:1017060902909
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  • 95
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    Insect resistance in potatoes: sources, evolutionary relationships, morphological and chemical defenses, and ecogeographical associations (1992)
    Springer
    Euphytica 61 (1992), S. 83-111 
    Details
    ISSN: 1573-5060
    Keywords: chemical defense ; Colorado potato beetle ; Empoasca fabae ; Epitrix cucumeris ; evolution ; germplasm ; green peach aphid ; insect resistance ; Leptinotarsa decemlineata ; Macrosiphum euphorbiae ; morphology ; Myzus persicae ; potato aphid ; potato flea beetle ; potato leafhopper ; relationship ; Solanum ; taxonomy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Summary The past 25 years, 1686 potato accessions, representing 100 species in the genus Solanum L., subgenus Potatoe, section Petota, were evaluated for field resistance to one or more of the following insect pests: green peach aphid, Myzus persicae (Sulzer); potato aphid, Macrosiphum euphorbiae (Thomas); Colorado potato beetle, Leptinotarsa decemlineata (Say); potato flea beetle, Epitrix cucumeris (Harris); and potato leafhopper, Empoasca fabae (Harris). Accessions highly resistant to green peach aphid were identified within 36 species, to potato aphid within 24 species, to Colorado potato beetle within 10 species, to potato flea beetle within 25 species, and to potato leafhopper within 39 species. Resistance levels were characteristic within Solanum species. Insect resistance appears to be a primitive trait in wild potatoes. Susceptibility was most common in the primitive and cultivated Tuberosa. Insect resistance was also characteristic of the most advanced species. The glycoalkaloid tomatine was associated with field resistance to Colorado potato beetle and potato leafhopper. Other glycoalkaloids were not associated with field resistance at the species level. Dense hairs were associated with resistance to green peach aphid, potato flea beetle, and potato leafhopper. Glandular trichomes were associated with field resistance to Colorado potato beetle, potato flea beetle, and potato leafhopper. Significant correlations between insect score and altitude of original collection were observed in six of thirteen species. Species from hot and arid areas were associated with resistance to Colorado potato beetle, potato flea beetle, and potato leafhopper. Species from cool or moist areas tended to be resistant to potato aphid.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF00026800
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  • 96
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    The presence of CYP79 homologues in glucosinolate-producing plants shows evolutionary conservation of the enzymes in the conversion of amino acid to aldoxime in the biosynthesis of cyanogenic glucosides and glucosinolates (1998)
    Springer
    Plant molecular biology 38 (1998), S. 725-734 
    Details
    ISSN: 1573-5028
    Keywords: glucosinolates ; cyanogenic glucosides ; biosynthesis ; cytochrome P450 ; evolution ; Capparales
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A cDNA encoding CYP79B1 has been isolated from Sinapis alba. CYP79B1 from S. alba shows 54% sequence identity and 73% similarity to sorghum CYP79A1 and 95% sequence identity to the Arabidopsis T42902, assigned CYP79B2. The high identity and similarity to sorghum CYP79A1, which catalyses the conversion of tyrosine to p-hydroxyphenylacetaldoxime in the biosynthesis of the cyanogenic glucoside dhurrin, suggests that CYP79B1 similarly catalyses the conversion of amino acid(s) to aldoxime(s) in the biosynthesis of glucosinolates. Within the highly conserved ‘PERF’ and the heme-binding region of A-type cytochromes, the CYP79 family has unique substitutions that define the family-specific consensus sequences of FXP(E/D)RH and SFSTG(K/R)RGC(A/I)A, respectively. Sequence analysis of PCR products generated with CYP79B subfamily-specific primers identified CYP79B homologues in Tropaeolum majus, Carica papaya, Arabidopsis, Brassica napus and S. alba. The five glucosinolate-producing plants identified a CYP79B amino acid consensus sequence KPERHLNECSEVTLTENDLRFISFSTGKRGC. The unique substitutions in the ‘PERF’ and the heme-binding domain and the high sequence identity and similarity of CYP79B1, CYP79B2 and CYP79A1, together with the isolation of CYP79B homologues in the distantly related Tropaeolaceae, Caricaceae and Brassicaceae within the Capparales order, show that the initial part of the biosynthetic pathway of glucosinolates and cyanogenic glucosides is catalysed by evolutionarily conserved cytochromes P450. This confirms that the appearance of glucosinolates in Capparales is based on a cyanogen ‘predisposition’. Identification of CYP79 homologues in glucosinolate-producing plants provides an important tool for tissue-specific regulation of the level of glucosinolates to improve nutritional value and pest resistance.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1023/A:1006064202774
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  • 97
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    The maize retinoblastoma protein homologue ZmRb-1 is regulated during leaf development and displays conserved interactions with G1/S regulators and plant cyclin D (CycD) proteins (1998)
    Springer
    Plant molecular biology 37 (1998), S. 155-169 
    Details
    ISSN: 1573-5028
    Keywords: evolution ; G1-S control ; plant cell cycle ; retinoblastoma protein family ; ZmRb
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Recent discoveries of plant retinoblastoma (Rb) protein homologues and D-type cyclins suggest that control of the onset of cell division in plants may have stronger parallels with mammalian G1/S controls than with yeasts. In mammals, the Rb protein interacts specifically with D-type cyclins and regulates cell proliferation by binding and inhibiting E2F transcription factors. However, the developmental role of Rb in plants and its potential interaction with cell cycle regulators is unknown. We show that the maize Rb homologue ZmRb-1 is temporally and spatially regulated during maize leaf development. ZmRb-1 is highly expressed in differentiating cells, but almost undetectable in proliferating cells. In vitro, both ZmRb-1 and human Rb bind all classes of plant D-type cyclins with the involvement of a conserved N-terminal Leu-x-Cys-x-Glu (LxCxE) Rb-interaction motif. This binding is strongly reduced by mutation of the conserved Cys-470 of ZmRb-1. ZmRb-1 binds human and Drosophila E2F, and inhibits transcriptional activation of human E2F. We also show that ZmRb-1 is a good in vitro substrate for all human G1/S protein kinases. The functional conservation of proteins that control the G1/S transition in mammals and plants points to the existence of plant E2F homologues. We conclude that evolution of Rb and cyclin D proteins occurred after separation of the fungi from the higher eukaryotic lineage, but preceded the divergence of plant and animal kingdoms.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1023/A:1005902226256
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  • 98
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    A reclassification of the anomopod families Macrothricidae and Chydoridae, with the creation of a new suborder, the Radopoda (Crustacea: Branchiopoda) (1998)
    Springer
    Hydrobiologia 384 (1998), S. 119-149 
    Details
    ISSN: 1573-5117
    Keywords: Branchiopoda ; Anomopoda ; Radopoda ; trunk limbs ; taxonomy ; morphology ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract An investigation, using optical microscopy and SEM, of the trunk limbs of the Anomopoda has revealed a large number of characters, previously underused or unused in taxonomy and comparative morphology. All these characters, which are nicely paralleled by some more conventional traits (head shield and pores, postabdomen, antennae ...), show one clear tendency across all groups studied: a state of complexity at one extreme, and a state of often incisive simplification at the other extreme, with a number of transitional stages in between. The complex character state, which itself is a simplification of the leg structure of the Ctenopoda and other, ‘large’ Branchiopoda, is here considered to represent a primitive condition. The simplified state is considered advanced. Based on this assumption, we list a number of unifying characters (mainly structural aspects of P1 and P2, but also the gnathobase of P3 and P4) for all macrothricid and chydorid-like anomopods, which we unite in the new suborder Radopoda. Non-radopod Anomopoda are not reclassified. We then derive a cascade of (mainly trunk-limb based) characters to work out a hypothesis on the evolution of the Radopoda. The ‘chydorid’ line (basically the former family Chydoridae) is classified as a superfamily (the Eurycercoidea), with three families; the ‘macrothricid’ line is capped by the superfamily Macrothricoidea, with four families. Of these seven families, four are upgraded from subfamily status, the Chydoridae are left status quo, the Macrothricidae are redefined, and the Neothricidae are a new family. The Macrothricidae are further subdivided in two subfamilies, of which the Macrothricinae appear reasonably homogeneous (monophyletic), while the non-Macrothricinae require further study. Some of these (e.g. Guernella) have almost completely lost their P5, a situation parallel to that of the P6 in the Eurycercidae, Acantholeberidae, and Ophryoxidae.
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    URL: http://dx.doi.org/10.1023/A:1003259630312
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  • 99
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    The evolutionary relationships of rotifers and acanthocephalans (1998)
    Springer
    Hydrobiologia 387-388 (1998), S. 83-91 
    Details
    ISSN: 1573-5117
    Keywords: phylogeny ; acanthocephala ; rotifera ; bilateria ; evolution ; 18S rRNA gene
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Advances in morphological and molecular studies of metazoan evolution have led to a better understanding of the relationships among Rotifera (Monogononta, Bdelloidea, Seisonidea) and Acanthocephala, and their relationships to other bilateral animals. The most accepted morphological analysis places Acanthocephala as a sister group to Rotifera, although other studies have placed Acanthocephala as a sister taxon to Bdellodea or Seisonidea. Molecular analyses using nuclear 18S rRNA and mitochondrial 16S rRNA genes support Acanthocephala as a sister taxon to Bdelloidea, although no molecular data is available for Seisonidea. Combining molecular and morphological analyses of Bilateria leads to a tree with Platyhelminthes, Rotifera, Acanthocephala and Gnathostomulida (and probably Gastrotricha) as a sister group to the annelid-mollusc lineage of the Spiralia (Lophotrochozoa).
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1023/A:1017060902909
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  • 100
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    Digestive enzyme activities and their distribution in the alimentary canal of larvae of the three extant lamprey families (1992)
    Springer
    Fish physiology and biochemistry 10 (1992), S. 1-10 
    Details
    ISSN: 1573-5168
    Keywords: larval lampreys ; exocrine pancreas ; lipase ; amylase ; chymotrypsin ; trypsin ; evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The activities of trypsin (EC 3.4.21.4), chymotrypsin (EC 3.4.21.1), lipase (EC 3.1.1.3) and amylase (EC 3.2.1.1) were measured in different regions of the alimentary tract of ammocoetes from each of the three extant lamprey families. In the southern hemisphere speciesGeotria australis (Geotriidae), and even more particularlyMordacia mordax (Mordaciidae), enzymatic activity was almost entirely confined to prominent diverticular extensions which arise at the oesophageal-intestinal junction. However, in the holarcticLampetra richardsoni (Petromyzontidae), which does not possess a diverticulum, the enzymatic activity was highest in the upper anterior intestine. It is not clear whether the presence of significantly higher amylolytic and lower lipolytic activities in the diverticulum ofG. australis than in the exocrine tissue of the other two species reflects interspecific differences in the composition of their diets. The capacity of exocrine tissue extracts for chymotryptic and tryptic digestion was assayed before and afterin vitro exposure to trypsin and enteropeptidase, their respective catalytic activators. Prior to exposure to these exogenous activators, both proteolytic enzymes were fully active inL. richardsoni, partially active inG. australis and totally inactive inM. mordax. Maximal chymotryptic activity was greater inM. mordax than inL. richardsoni andG. australis. In contrast, maximal tryptic activity was greater inL. richardsoni than inG. australis and was very low inM. mordax. Since trypsin is the only known activator of chymotrypsinogen, the negligible activity of trypsin inM. mordax would appear anomalous unless a trypsin inhibitor is present in the protopancreas of this species. Differences in the distribution of enzymatic activity within the alimentary tract of the three species is discussed in relation to proposed phylogenetic relationships amongst the extant lamprey families.
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    URL: http://dx.doi.org/10.1007/BF00004649
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