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  • Elsevier  (975)
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  • 1
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    Elsevier
    In:  In: Encyclopedia of Geology. , ed. by Elias, S. and Alderton, D. Elsevier, London, pp. 52-59, 8 pp. 2nd edition ISBN 978-0-08-102909-1
    Publication Date: 2021-01-26
    Description: The vast majority of active volcanism that is located at plate boundaries can be easily explained by plate tectonic processes. Intraplate volcanism, which incorporates some of the smallest and largest volcanic events on Earth, cannot be successfully explained by a single process or model. The most volumetrically significant intraplate volcanic events are associated with the arrival of the head of a thermo-chemical anomaly rising from the deep mantle and impacting the base of the lithosphere. This event generates massive and short-lived magmatic activity over a wide area (up to 2000 km across), forming a large igneous province. A long-lived hotspot track can form over the mantle plume tail and is best illustrated by the formation of age progressive volcanic chains, such as the famous Hawaiian-Emperor chain. Millions of smaller solitary volcanic edifices, non-age progressive volcanic chains and provinces, on the other hand, have other potential mechanisms of origin. Potential models comprise decompression melting due to lithospheric extension, destabilization of fusible lithologies in the lithospheric mantle, small scale sub-lithospheric convection, or lithospheric delamination.
    Type: Book chapter , NonPeerReviewed
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  • 2
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    Elsevier
    In:  In: Fundamentals of Tropical Freshwater Wetlands. , ed. by Dalu, T. and Wasserman, R. J. Elsevier, Amsterdam, The Netherlands, pp. 517-547. ISBN 978-0-12-822362-8
    Publication Date: 2021-11-23
    Type: Book chapter , NonPeerReviewed
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  • 3
    Publication Date: 2021-01-08
    Description: Gas hydrates dissociation could induce or trigger submarine landslides, especially in upper continental slopes where hydrates are vulnerable to natural and artificial perturbations. This work investigates destabilization mechanisms of an upper continental slope undergoing hydrate dissociation and identifies spatiotemporal failure modes influenced by characteristics of the overburden above the hydrate-bearing layer (i.e. the hydrate reservoir). A Thermo-Hydro-Chemical coupled numerical model of transient pore pressure induced by hydrate dissociation is coupled with the limit equilibrium slope analysis method to study the spatiotemporal evolution of the potential sliding plane and to calculate the corresponding factor of safety. The results suggest that overpressure generated by the liberated fluid from hydrate dissociation is the primary reason for instability in a gentle marine slope. The study identifies three sliding modes, namely co-melting non-interface sliding, co-melting interface sliding, and post-melting non-interface sliding, depending on the overburden's characteristics, including overburden thickness, permeability, and cohesion. Co-melting non-interface sliding takes place during hydrate dissociation if the hydrate reservoir underlies a thin, pervious and low-cohesion overburden cover. For less permeable and more cohesive overburdens, the potential sliding plane is deeper and co-melting interface sliding could be triggered due to overpressure developed at the reservoir-overburden interface. If the hydrate reservoir is covered by a thick, low-permeability and slightly cohesive overburden, post-melting non-interface sliding could occur after the hydrates are completely dissociated. This failure is delayed, because the gas/water trapped at the interface during hydrate dissociation is insufficient to trigger instability due to very high overburden stresses. However, as the gas migrates upwards over time and encounters a weak zone in the overburden deposits, failure could happen within the overburden deposits even after hydrate dissociation stops. The findings help to improve our fundamental understanding about the destabilization mechanism and failure modes of the continental slopes undergoing hydrate dissociation, and to delineate the vulnerable configurations of the slopes.
    Type: Article , PeerReviewed
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  • 4
    Publication Date: 2021-01-08
    Description: n our daily lives, we consume foods that have been transported, stored, prepared, cooked, or otherwise processed by ourselves or others. Food storage and preparation have drastic effects on the chemical composition of foods. Untargeted mass spectrometry analysis of food samples has the potential to increase our chemical understanding of these processes by detecting a broad spectrum of chemicals. We performed a time-based analysis of the chemical changes in foods during common preparations, such as fermentation, brewing, and ripening, using untargeted mass spectrometry and molecular networking. The data analysis workflow presented implements an approach to study changes in food chemistry that can reveal global alterations in chemical profiles, identify changes in abundance, as well as identify specific chemicals and their transformation products. The data generated in this study are publicly available, enabling the replication and re-analysis of these data in isolation, and serve as a baseline dataset for future investigations.
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  • 5
    Publication Date: 2021-01-08
    Description: A comparison of gouge and hammer coring techniques in intertidal wetland soils highlights a significant effect of soil compaction of up to 28% associated with the widely applied hammer coring method employed in Blue Carbon research. Hammer coring reduces the thickness of the soil profile and increases the dry bulk density, which results in an overestimation of the soil OC stock of up to 22%. In saltmarshes with multiple different soil units, we show that hammer coring is unsuitable for the calculation of OC stocks and should be avoided in favour of Russian or gouge cores. Compaction changes both soil dry bulk density and porosity and we show that resultant radiometric chronologies are compromised, almost doubling mass accumulation rates. While we show that the OC (%) content of these sediments is largely unchanged by coring method, the implication for OC burial rates are profound because of the significant effect of hammer coring on the calculation of soil mass accumlation rates.
    Type: Article , PeerReviewed
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  • 6
    Publication Date: 2021-01-08
    Description: Seagrasses provide multiple ‘ecosystem services' in coastal waters, including carbon sequestration. However, this ‘Blue Carbon’ potential has been only evaluated for certain species from some areas of the world. In this study, we provide initial estimates on the magnitude and local variability of carbon sequestration, as organic carbon stocks, for seagrass meadows of Cymodocea nodosa (Ucria) Ascherson in the oceanic island of Gran Canaria (Canary Islands, Spain, central-eastern Atlantic). Six seagrass meadows were selected; at each meadow, cores inserted up to 30 cm in the seabed were collected in the ‘interior’, ‘edge’ and ‘unvegetated’ bottoms immediately adjacent to seagrass patches. We estimated organic carbon (Corg) pools by means of the Loss of Ignition (LOI) procedure. Overall, larger Corg pools were observed in the ‘interior’ and 'edges' of meadow patches than in adjacent ‘unvegetated’ bottoms. At the meadow-level, Corg pools were not predicted neither by the meadow area, nor by the mean shoot density, or sediment grain fractions. Overall, the total estimated stock was 86.20 ± 19.06 Mg C ha−1. By considering the total potential extension of seagrass meadows across the entire island perimeter, we estimated a total stock of 60.34 Gg of C, for a mean estimated financial value of 919,432.249 € (1313.47 € ha−1), which ranges between 351,631.35 € (502.33 € ha−1) and 1,498,954.45 € (2141.36 € ha−1), according to varying market prices in the last 5 years. This work highlights, therefore, the importance of meadows underpinned by C. nodosa not only at an ecological, but also at an economic level, in particular from the perspective of regional climate change adaptation strategies.
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  • 7
    Publication Date: 2021-01-08
    Description: Ciona intestinalis is within the group of taxa that are spreading globally and is one of the most thriving invasive marine species, known to depress both species richness and abundance at a local scale in distinct geographic areas. It is a dominant biofouling agent, associated with the decreasing economic incomes from aquaculture operations around the world. Ciona intestinalis was first observed in 2007 at Straumsvík in Southwest Iceland. The present study was designed to provide general information on its current distribution across Icelandic harbours. The species was found only on the SW coast of Iceland, in dense aggregations reaching up to 876 ind/m2 in all harbours from Grindavík to Akranes. The current work provides information that can be used to track the dispersal of C. intestinalis populations along the Icelandic coast and for the development of effective management decisions.
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  • 8
    Publication Date: 2021-01-08
    Description: Interest in microalgae-derived products is growing, mostly due to their unique characteristics and range of industrial applications. To obtain different products, one must employ specific pretreatments that retain the properties of the biologically active compounds extracted from microalgae biomass; thus, new extraction techniques require frequent upgrades. Due to increased interest in economically viable and ecologically friendly processes, new extraction methods that can be incorporated into microalgae biorefinery systems have become the main focus of research. Therefore, this review aims to address the potential applications, future prospects, and economic scenario of the new physicochemical treatments used in the extraction of bioactive microalgae compounds.
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  • 9
    Publication Date: 2021-01-08
    Description: Long-chain polyunsaturated fatty acids (LC-PUFAs) especially ω-3 fatty acids provide significant health benefits for human beings. However, ω-3 LC-PUFAs cannot be synthesized de novo in mammals. Traditionally, ω-3 LC-PUFAs are extracted from marine fish, and their production depends on sea fishing, which has not met ever-increasing global demand. To address the challenges, innovative cellular engineering strategies need to be developed. In nature, many fungi and microalgae are rich in ω-3 LC-PUFAs, representing promising sources of ω-3 LC-PUFAs. The latest progress in developing new cellular engineering strategies toward sustainable ω-3 LC-PUFAs production using fungi and microalga has demonstrated that they can to some extent address the supply shortage. In this review, we critically summarize the recent progress in enhancing the productivity in various ω-3 LC-PUFAs-producing organisms, as well as the latest efforts of biosynthesizing PUFAs in heterogenous biosystems. In addition, we also provide future perspectives in developing genetic toolkits for LC-PUFAs producing microbes so that cut-edging biotechnology such as gene stacking and genome editing can be further applied to increase the productivity of ω-3 LC-PUFAs.
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  • 10
    Publication Date: 2021-01-08
    Description: Factors affecting carotenoid extraction with edible oils were examined using edible brown seaweed, Sargassum horneri, as main sample. The results indicate that drying was essential to extract fucoxanthin (Fx) from S. horneri and physical (boiling) and chemical (acid/alkali) pretreatment of the wet sample increased the extraction rate of Fx. Additionally, more Fx was found from the dried S. horneri powder with a smaller particle size. The extraction rate of Fx is affected by the extraction temperature and time, showing that the effective extraction would be obtained at 50 °C within 12 hr extraction. Among the oils used, short-chain (C4 and C6) triacylglycerol (TAG) (SCT) and medium-chain (C8) TAG (MCT) could extract more Fx from S. horneri and more β-carotene and lutein from spinach and olive leaves. The relatively lower viscosity of SCT and MCT would be the most likely reason for the higher extraction rates of both TAGs.
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  • 11
    Publication Date: 2021-01-08
    Description: Sargassum fusiforme polysaccharides, acidic water-soluble polysaccharides extract from Sargassum fusiforme, are mainly composed of alginic acid, fucoidan and laminaran. Alginic acid is carboxyl-containing polysaccharide formed by joining β-D-mannuronic acid and α-L-guluronic acid through β-(1→4)/α-(1→4) glycosidic bond. Fucoidan, a natural water-soluble sulfated heteropolysaccharide with fucose and sulfuric acid groups as the core structure, is mainly linked by L-fucose through α-(1→3) glycosidic bond and has the strongest biological activity. Laminaran is mainly composed of β-D-glucose through β-(1→3) glycosidic bond linkage. Sargassum fusiforme polysaccharides have a variety of pharmacological activities, including antioxidant, anti-tumor, promoting immunity, anti-aging, prompting bone growth, lowering blood glucose, anti-coagulation, anti-virus, anti-bacteria, anti-fatigue, promoting growth and development, and skin protection. These activities are closely related to the functions of fucoidan in Sargassum fusiforme polysaccharides, which fucoidan is able to strengthen immune system and antioxidation in human body. In this review, the composition, the isolation and purification, and the biological activities of Sargassum fusiforme polysaccharides are discussed and can bereference for further study.
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  • 12
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    Elsevier
    In:  Computers and Geotechnics, 124 (Article number 103596).
    Publication Date: 2021-01-08
    Description: Numerical simulation is important for practical and efficient assessment of hydrate reservoir formation stability and gas production potential. The history-matching simulation of hydrate gas production tests is complex due to coupled THM (thermo-hydro-mechanical) phenomena. The well log data from the Eastern Nankai Trough methane gas production site suggest vertically heterogeneous field properties. In the previous numerical simulation research of this site, the heterogeneous geological data were homogenized by adopting the standard mean-field theory, which can potentially lead to inaccurate simulation results due to the mesh size effect. By introducing new upscaling techniques for the permeability profiles and mechanical responses, a revised homogenization approach is proposed to improve the coupled THM simulation accuracy. In this study, seven gas production simulations of a hypothetical reservoir, six simulations of the Eastern Nankai Trough gas production test, and four simulations of the randomly generated site formation production test with different mesh sizes and different homogenization approaches were carried out to demonstrate that the proposed upscaling techniques can improve the accuracy of the simulation results with a coarse mesh model. This work, in turn, provides researchers and field engineers a much quicker way to assess the complex geomechanical behaviors of hydrate gas production site.
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  • 13
    Publication Date: 2021-01-08
    Description: Nitrous oxide is an important greenhouse gas and there is a need for sensitive techniques to study its distribution in the environment at concentrations near equilibrium with the atmosphere (9.6 nM in water at 20 °C). Here we present an electrochemical sensor that can quantify N2O in the nanomolar range. The sensor principle relies on a front guard cathode placed in front of the measuring cathode. This cathode is used to periodically block the flux of N2O towards the measuring cathode, thereby creating an amplitude in the signal. This signal amplitude is unaffected by drift in the baseline current and can be read at very high resolution, resulting in a sensitivity of 2 nM N2O for newly constructed sensors. Interference from oxygen is prevented by placing the front guard cathode in oxygen-consuming electrolyte. The sensor was field tested by measuring an N2O profile to a depth of 120 m in the oxygen minimum zone of the Eastern Tropical North Pacific Ocean (ETNP) off the coast of Mexico.
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  • 14
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    Elsevier
    In:  Progress in Oceanography, 186 . p. 102346.
    Publication Date: 2021-01-08
    Description: The ability of consumers to convert ingested carbon into growth is critical for secondary production and trophic transfer. We conducted laboratory experiments to investigate the effect of different prey and concentration on the ingestion rate (IR), egg production rate (EPR) and egg production efficiency (EPE) of the ubiquitous copepod, Acartia tonsa. Experiments were run at several prey concentrations, ranging from 11 to 1132 μgC L–1, of the diatom Thalassiosira weissflogii, the autotrophic dinoflagellate Prorocentrum minimum, the heterotrophic dinoflagellate Oxyrrhis sp., the flagellate Dunaliella tertiolecta, and the bacterivorous scuticociliate Uronema sp. IR increased curvilinearly with concentration for all diets. EPR also increased curvilinearly with increasing food concentration similar to IR, with the exception of the flagellate diet, for which EPR decreased linearly with food concentration. EPR ranked as T. weissflogii 〉 P. minimum 〉 Oxyrrhis sp. = Uronema sp. 〉 D. tertiolecta. IR and EPR were linearly related, except for flagellate diet. The slope of the carbon-based relationship between IR and EPR, the egg production efficiency (EPE), was highest for the diatom (77.5%) and lowest for the scuticociliate (4.2%). Egg production was not correlated to ingestion of the flagellate offered to A. tonsa. We conclude that of the five prey species, the diatom T. weissflogii is the best prey to promote A. tonsa reproduction, to optimize trophic transfer efficiency, and to increase mass cultivation of this species.
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  • 15
    Publication Date: 2021-01-08
    Description: Geochemical patterns in the environment are always the result of certain processes. Therefore, it is essential to decipher a process to properly evaluate the environmental role and potential of chemical elements/compounds. This allows the distinction between natural and anthropogenic influence on elemental concentrations. However, if the compositional nature of geochemical data is neglected, erroneous or misleading conclusions regarding the processes involved are probable. In this study the reconstruction of depositional environments and processes through the Holocene in two sediment cores obtained from submerged sinkholes located on the island of Mljet, Croatia, was performed by taking into account the compositional nature of geochemical, mineralogical and grainsize data. Problems involving compositional data are always multivariate; for example, the concentration of a single element does not carry any interpretative information, as only the ratios between elements do. This has led to the discovery of a large number of geochemical proxies based on elemental ratios, which describe certain environmental conditions and processes involved. Nevertheless, some proxies have been found to be restricted to only some specific environments, thus preventing them from being used in general; therefore, some kind of relation between different proxies is necessary to obtain final conclusions. However, when using simple elemental ratios, those correlations cannot be obtained due to the nature of compositional data. With a sequential binary partition of a compositional vector, orthonormal log ratio (olr) coordinates (proxies) can be constructed. When based on expert knowledge, those proxies fully acknowledge the geochemical properties of the chosen elements with one major difference - that the correlation between newly obtained variables is mathematically well grounded. As a result, the final conclusion is more accurate. In this research, geochemical proxies obtained as a representation in olr coordinates of the elements that are enriched compared to the local soil were used to perform principal component analyses. It helped to unravel the evolution of sedimentary environments. Mineralogical (XRD and heavy mineral data) and grain size analyses supported the conclusions obtained based solely on geochemical data. Furthermore, data analysis suggests that the proxies for redox conditions described in the literature should be used with caution, as their use is somewhat limited.
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  • 16
    Publication Date: 2021-01-08
    Description: New antifungals are increasingly needed due to the emergence of resistant fungal strains. Traditional antifungal assays are laborious and require significant amounts of samples. The present work presents a new proposal to evaluate antifungal activity and antagonism among fungal species, based on experiments of fungal culture and co-culture, 1H NMR profile of fungal culture extracts and chemometrics. In order to develop the work, six axenic cultures of fungi that infested fruits (Fusarium guttiforme, Pestalotiopsis diospyri, Phoma caricae-papayae, Colletotrichum horii, Phytophthora palmivora, and C. gloeosporioides), and co-cultures of all possible combination among them were performed (totalizing 63 experiments). All fungal extracts were evaluated by 1H NMR followed by Principal Component Analyses (PCA) in order to determine spectral dissimilarity among the extracts. Results showed that 1H NMR data evaluated by PCA were capable to predict both antagonism and antifungal activity. Traditional antifungal in vitro assays of active and inactive extracts were also performed in order to prove the prediction made by PCA. The obtained data showed that the approach is an outstanding tool to simultaneously obtain and evaluate bioactive compounds because: it was able to predict the activity of five different extracts in a collection of sixty-three, which would be much more difficult and time consuming if applied randomly; most important antifungal extracts are indicated by PCA; hundreds of traditional in vitro assays are avoid; and, the method is very time and money saving.
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  • 17
    Publication Date: 2021-01-08
    Description: Highlights • Total modeled carbon cycling at disturbed sites is lower than at reference sites. • Projected microbial loop functioning is reduced 26 years after sediment disturbance. • Estimated faunal respiration has recovered from sediment disturbance. • Estimated microbial respiration has not recovered from the sediment disturbance. Abstract Due to the predicted future demand for critical metals, abyssal plains covered with polymetallic nodules are currently being prospected for deep-seabed mining. Deep-seabed mining will lead to significant sediment disturbance over large spatial scales and for extended periods of time. The environmental impact of a small-scale sediment disturbance was studied during the ‘DISturbance and reCOLonization’ (DISCOL) experiment in the Peru Basin in 1989 when 10.8 km2 of seafloor were ploughed with a plough harrow. Here, we present a detailed description of carbon-based food-web models constructed from various datasets collected in 2015, 26 years after the experiment. Detailed observations of the benthic food web were made at three distinct sites: inside 26-year old plough tracks (IPT, subjected to direct impact from ploughing), outside the plough tracks (OPT, exposed to settling of resuspended sediment), and at reference sites (REF, no impact). The observations were used to develop highly-resolved food-web models for each site that quantified the carbon (C) fluxes between biotic (ranging from prokaryotes to various functional groups in meio-, macro-, and megafauna) and abiotic (e.g. detritus) compartments. The model outputs were used to estimate total system throughput, i.e., the sum of all C flows in the food web (the ‘ecological size’ of the system), and microbial loop functioning, i.e., the C-cycling through the prokaryotic compartment for each site. Both the estimated total system throughput and the microbial loop cycling were significantly reduced (by 16% and 35%, respectively) inside the plough tracks compared to the other two sites. Site differences in modelled faunal respiration varied among the different faunal compartments. Overall, modelled faunal respiration appeared to have recovered to, or exceeded reference values after 26-years. The model results indicate that food-web functioning, and especially the microbial loop, have not recovered from the disturbance that was inflicted on the abyssal site 26 years ago.
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  • 18
    Publication Date: 2021-01-08
    Description: Highlights: • Crystal structure of the malaria parasite lipocalin • Comparative analysis of lipocalin superfamily members in alveolate genomes • Localization of PfLipocalin to the parasitophorous vacuole and food vacuole • Reverse genetics reveal PfLipocalin function in oxidative damage control Summary: Proteins of the lipocalin family are known to bind small hydrophobic ligands and are involved in various physiological processes ranging from lipid transport to oxidative stress responses. The genome of the malaria parasite Plasmodium falciparum contains a single protein PF3D7_0925900 with a lipocalin signature. Using crystallography and small-angle X-ray scattering, we show that the protein has a tetrameric structure of typical lipocalin monomers; hence we name it P. falciparum lipocalin (PfLCN). We show that PfLCN is expressed in the intraerythrocytic stages of the parasite and localizes to the parasitophorous and food vacuoles. Conditional knockdown of PfLCN impairs parasite development, which can be rescued by treatment with the radical scavenger Trolox or by temporal inhibition of hemoglobin digestion. This suggests a key function of PfLCN in counteracting oxidative stress-induced cell damage during multiplication of parasites within erythrocytes.
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  • 19
    Publication Date: 2021-02-08
    Description: Eco-friendly, cost efficient and effective extraction methods have become significant for the industries applying zero waste principles. The two main objectives of this study were; to examine fucoxanthin extraction from wet Phaeodactylum tricornutum using subcritical fluid extraction and to characterize the residual biomass in order to determine the potential application areas. The highest fucoxanthin yield of 0.69 ± 0.05 mg/g wet cell weight was achieved using methanol with solvent-to-solid ratio of 200:1 at 120 rpm, 20 MPa pressure and at 35 °C for 60 min by subcritical extraction. Microscopy images showed that most of the cells were disrupted and intracellular components were effectively released. Based on the results of energy dispersive spectroscopy, biomass contained a mixture of organic molecules including mainly carbon (57–72%), oxygen (26–41%), magnesium (0.6–1.4%) and silica (0.4–1%) (wt%). These results make the residual biomass a potential candidate for various areas such as bioenergy, material sciences and sensor technologies.
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  • 20
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    Elsevier
    In:  Planetary and Space Science, 190 . Art.-Nr.: 105023.
    Publication Date: 2021-01-08
    Description: In a short note of 1998 Davankov questioned the generally accepted notion that the unique features of the planet Earth, namely, the presence of life and atmospheric oxygen are inseparably bonded as a case and effect. Indeed, photosynthesis in terrestrial and aquatic phototrophs simultaneously produces oxygen and carbohydrates in almost equal amounts. Since the degradation of organic matter through burning or rotting also consumes an equivalent amount of oxygen, the total masses of oxygen and organic material must always remain comparable. This correlation for Earth appears to be drastically distorted in favor of oxygen, thus disproving the still widespread delusion of biogenic origin of atmospheric oxygen. Instead, by analyzing more recent data on the balance between oxygen and organics we arrive at the conclusion that radiolysis of water vapors with the preferential dissipation of hydrogen to space, most probably, was the major source of the free and oxidation-spent oxygen. The present review tries to illuminate the most important uncertainties that still remain to be clarified before an interdisciplinary and scientifically-balanced picture on the evolution of Earth gets settled.
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  • 21
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    Elsevier
    In:  In: Sustainable Seaweed Technologies. , ed. by Torres, M. D., Kraan, S. and Dominguez, H. Elsevier, Amsterdam, Netherlands, pp. 613-639, 27 pp. ISBN 978-0-12-817943-7
    Publication Date: 2021-01-11
    Description: The concept of biosorption results from the “passive” (nonmetabolic) interaction of a chemical species with a particle of a biological material. This interaction can be practically exploited, for example, for removal of toxic substances of wastewaters or for the enrichment of a fertilizer with micronutrients. In this work, equilibrium and dynamic data obtained with “low-cost” biomaterials of algal waste or invasive seaweed species have been reviewed and critically analyzed in the context of a circular economy. The concept of a biosorption unit, oriented to the valorization of any solid residual material of algal biomass, can be considered as a real possibility in a biorefinery process; but to accomplish this goal it is necessary that the emphasis on research must definitely move from laboratory scale toward pilot plant assays.
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  • 22
    Publication Date: 2021-01-08
    Description: Carnivorous gelatinous zooplankton (GZ) can be very abundant in marine ecosystems around the globe and exert considerable predation pressures on micro- to macrozooplankton as well as larval and juvenile fish. As these species are in many cases intermediate and top predators, their biomass can be easily evaluated, which could indicate overall food web stability or alteration. There is growing concern worldwide about increasing abundances of GZ species and consequently negative impacts on food webs and human coastal zones activities. In this paper, I present a case study from a shallow Danish cove and a long-term record spanning 29 years (1991–2019) obtained by unconventional means. Jellyfish were collected using horizontal sub-surface net tows in August and September during a summer student class. Sea surface temperature and chlorophyll a concentration were measured in parallel. No clear long-term trend in jellyfish biomass could be seen, whereas the values were highly variable from year to year. This is in contrast with other published Scandinavian long-term GZ time series. Sea surface temperature and chlorophyll a concentration had significant (and interactive) effects on the jellyfish biomass in Kertinge Nor. The scarcity and shortness of GZ long-term series do not allow solid conclusions in most marine ecosystems, so it becomes clear that publishing time series (even with small spatial extent) can contribute to improve the perception of interannual GZ population developments. Thus, I strongly recommend extending monitoring activities, explicitly including GZ taxa, in as many marine ecosystems as feasible.
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  • 23
    Publication Date: 2021-01-08
    Description: This paper describes methods of obtaining improved estimates of long-term sea level trends for the British Isles. This is achieved by lengthening the sea level records where possible, then removing known sources of variability, and then further adjusting for datum errors that are revealed by the previous processes after verification using metadata from archived sources. Local sea level variability is accounted for using a tide and surge model. Far field variability is accounted for using a “common mode”. This combination reduces the residual variability seen at tide gauges around the coast of the British Isles to the point that a number of previously unrecognised steps in individual records become apparent, permitting a higher level of quality control to be applied. A comprehensive data archaeology exercise was carried out which showed that these step-like errors are mostly coincident with recorded site-specific changes in instrumentation, and that in many cases the periodic tide gauge calibration records can be used to quantify these steps. A smaller number of steps are confirmed by “buddy-checking” against neighbouring tide gauges. After accounting for the observed steps, using levelling information where possible and an empirical fit otherwise, the records become significantly more consistent. The steps are not found to make a large difference to the trend and acceleration observed in UK sea level overall, but their correction results in much more consistent estimates of first order (Sea Level Rise) and second order (Sea Level Acceleration) trends over this 60-year period. We find a mean rate of sea level rise of 2.39 ± 0.27 mm yr−1, and an acceleration of 0.058 ± 0.030 mm yr−2 between Jan. 1958 and Dec. 2018. The cleaner dataset also permits us to show more clearly that the variability other than that derived from local meteorology is indeed consistent around the UK, and relates to sea level changes along the eastern boundary of the North Atlantic.
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  • 24
    Publication Date: 2021-01-08
    Description: Fucoxanthin is the major abundant xanthophyll in macro- and micro-algae as a component of photosynthetic light-harvesting complexes for photosynthesis and photoprotection. Nowadays, widespread application of fucoxanthin in food industry, pharmaceutical, and medical purposes are increasing. The current issue attracts the attention of researchers for producing of carotenoid from its natural resources, especially algae. Againts macroalgae, microalgae have rapid growth with the same source of food. In addition, they can grow from variety of situations and environmental conditions to produce a specific biochemical product. Microalgae, e.g. Tisochrysis lutea (T. lutea), can be cultivated under controlled conditions, low cost, and higher concentration of fucoxanthin. This review presents some of nutraceutical effects of fucoxanthin for human health and then, in particular, recent biotechnological developments in bioprocessing of this valuable product including, cultivation, harvesting, extraction, and purification, from T. lutea.
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  • 25
    Publication Date: 2021-01-08
    Description: Pretreatment of microalgal biomass possessing rigid cell wall is a critical step for enhancing the efficiency of microalgal biorefinery. However, the conventional pretreatment processes suffer the drawbacks of complex processing steps, long processing time, low conversion efficiency and high processing costs. This significantly hinders the industrial applicability of microalgal biorefinery. The innovative electricity-aid pretreatment techniques serve as a promising processing tool to extensively enhance the release of intracellular substances from microalgae. In this review, application of electric field-based techniques and recent advances of using electrical pretreatments on microalgae cell focusing on pulsed electric field, electrolysis, high voltage electrical discharges and moderate electric field are reviewed. In addition, the emerging techniques integrating electrolysis with liquid biphasic flotation process as promising downstream approach is discussed. This review delivers broad knowledge of the present significance of the application of these methods focusing on the development of electric assisted biomolecules extraction from microalgae.
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  • 26
    Publication Date: 2021-01-08
    Description: Coastal communities, knowingly or otherwise, rely on seagrasses for their livelihood, recreation and food source, among other services. However, despite its importance, seagrasses are not receiving similar attentions with its adjacent ecosystems, the mangroves, and coral reefs. Because of their role in climate change mitigation, seagrasses along with mangroves and salt marshes (the blue carbon ecosystems) are gaining attention recently. This preliminary study investigates the perception of coastal communities in Eastern Samar, Philippines on seagrasses. The results of the survey show that there is a level of high awareness among respondents to seagrass ecosystem services. Despite that, however, utilization remains low. The level of awareness varies on the type of ecosystem service; for instance, locals have a high awareness of provisioning services while low awareness of cultural services. The survey also included the perceived threats to seagrasses, where damages caused by natural disturbances are identified as the most concerning threat. This may be due to the geographic location of the sites that are frequented by typhoons. The perception potentially indicates depleted resources brought about by mismanagement or overlooking this natural resource. The results provide a more contextualized understanding on how local communities are aware of and interacting with, or the lack thereof, seagrass ecosystems. This could aid local government units (LGUs) and conservation groups in the area to craft practicable and sustainable management plans and threat-specific solutions.
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  • 27
    Publication Date: 2021-01-08
    Description: Simulating complex physical systems often involves solving partial differential equations (PDEs) with some closures due to the presence of multi-scale physics that cannot be fully resolved. Therefore, reliable and accurate closure models for unresolved physics remains an important requirement for many computational physics problems, e.g., turbulence simulation. Recently, several researchers have adopted generative adversarial networks (GANs), a novel paradigm of training machine learning models, to generate solutions of PDEs-governed complex systems without having to numerically solve these PDEs. However, GANs are known to be difficult in training and likely to converge to local minima, where the generated samples do not capture the true statistics of the training data. In this work, we present a statistical constrained generative adversarial network by enforcing constraints of covariance from the training data, which results in an improved machine-learning-based emulator to capture the statistics of the training data generated by solving fully resolved PDEs. We show that such a statistical regularization leads to better performance compared to standard GANs, measured by (1) the constrained model's ability to more faithfully emulate certain physical properties of the system and (2) the significantly reduced (by up to 80%) training time to reach the solution. We exemplify this approach on the Rayleigh-Benard convection, a turbulent flow system that is an idealized model of the Earth's atmosphere. With the growth of high-fidelity simulation databases of physical systems, this work suggests great potential for being an alternative to the explicit modeling of closures or parameterizations for unresolved physics, which are known to be a major source of uncertainty in simulating multi-scale physical systems, e.g., turbulence or Earth's climate.
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  • 28
    Publication Date: 2021-01-08
    Description: Microalgae are a rich source of natural bioactive compounds, e.g. astaxanthin, β-carotene, lutein, and fatty acids (FAs), that are currently in high demand in the market. Conventional extraction methods often produce adverse effects on some of these compounds. Replacing conventional extraction methods with more efficient advanced green technologies that offer greater extracts purity and low environmental impact is therefore a challenging and sought-for target. This review is a comprehensive overview of supercritical fluid (SCF) extraction processes, including the latest research on the extraction of bioactive compounds from microalgae biomass and their benefits on human health. In addition, the role of key operating parameters on the selectivity of various compounds is discussed. This study provides useful knowledge that can productively contribute to the future development of SCF-based extraction technologies on an industrial scale.
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  • 29
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    Elsevier
    In:  Trends in Genetics, 36 (6). pp. 395-402.
    Publication Date: 2021-01-08
    Description: Aging entails an irreversible deceleration of physiological processes, altered metabolic activities, and a decline of the integrity of tissues, organs, and organ systems. The accumulation of alterations in the genetic and epigenetic spaces has been proposed as an explanation for aging. They result, at least in part, from DNA replication and chromosome segregation errors due to cell division during development, growth, renewal, and repair. Such deleterious alterations, including epigenetic drift, irreversibly accumulate in a stepwise, ratchet-like manner and reduce cellular fitness, similar to the process known as Muller’s ratchet. Here, we revisit the Muller’s ratchet principle applied to the aging of somatic cell populations and discuss the implications for understanding the origins of senescence, frailty, and morbidity.
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  • 30
    Publication Date: 2021-01-08
    Description: Natural cycles in the seawater partial pressure of carbon dioxide (CO2) in the Gulf of Maine, which vary in surface waters from ~250 to 550 µatm seasonally, provide an opportunity to observe how the life cycle and phenology of the shelled pteropod Limacina retroversa responds to changing food, temperature and carbonate chemistry conditions. Distributional, hydrographic, and physiological sampling suggest that pteropod populations are located in the upper portion of the water column (0–150 m) with a maximum abundance above 50 m. Gene expression and shell condition measurements show that the population already experiences biomineralization stress in the winter months when measured aragonite saturation state was at a seasonal low (though slightly oversaturated), reinforcing the usefulness of this organism as a bio-indicator for pelagic ecosystem response to ocean acidification. There appear to be two reproductive events per year with one pulse timed to coincide with the spring bloom, the period with highest respiration rate, fluorescence, and pH, and a second more extended pulse in the late summer and fall when saturation states remain high and fluorescence begins to decline. During the fall there is transcriptomic evidence of lipid storage for overwintering, allowing the second generation to survive the period of low food and aragonite saturation state. Based on these observations we predict that in the future pteropods will likely be most vulnerable to changing CO2 regionally during the fall reproductive event when CO2 concentration already naturally rises and when there is the added stress of generating lipid stores.
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  • 31
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    Elsevier
    In:  Computers & Geosciences, 139 . Art.Nr. 104482.
    Publication Date: 2021-01-08
    Description: We use numerical simulations on petrographically characterized thin-section images to predict three-dimensional elastic compressibility of sandstones. We predict two key statistics of compressibility curves measured under uniaxial boundary conditions in a laboratory - i) minimum compressibility at 1500 psi or 10 MPa depletion stress, and ii) maximum compressibility. A new Digital Rock workflow was developed for predicting compressibility based on the simulation of stress field using a segmented two-dimensional thin-section image. We also propose linear and non-linear relationships of log base 10 (compressibility) with in-situ porosity that can be used for compressibility prediction in the absence of laboratory measurements or two-dimensional images. Based on the results of application of the proposed relationships on samples from different fields with laboratory measurements, we conclude that the best prediction for minimum compressibility is obtained using the Digital Rock workflow and the best prediction for maximum compressibility is obtained using the proposed non-linear relationship using in-situ porosity. The range of compressibility values given by the difference between maximum and minimum compressibility predicted using the proposed methods can be used in making better informed economic decisions in field development planning.
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  • 32
    Publication Date: 2021-01-08
    Description: Pteropods are holopelagic marine snails and slugs that are of particular interest to science due to their role in marine food webs, global carbon cycle and their potential sensitivity to ocean change. Due to their pelagic, often exclusively offshore occurrence, samples are difficult to obtain, resulting in a lack of knowledge about their physiology, ecology, anatomy, geographical ranges, phylogenetic relationships and reproductive biology. Despite a recent increase in interest surrounding pteropod taxonomy, many evolutionary uncertainties remain due to limited taxon sampling and inavailability of molecular vouchers, in particular for the lesser investigated groups Pseudothecosomata and Gymnosomata. The Northwest Pacific Ocean is one of the least investigated areas for pteropods and in the adjacent semi-enclosed Sea of Okhotsk basin, current knowledge is restricted to the epipelagic zone. We summarize results from plankton hauls (from up to 5900 m depth) conducted during the joint German/Russian SokhoBio and KuramBio II cruises to the Sea of Okhotsk and the Kuril-Kamchatka-Trench region. This study presents an integrative taxonomic overview of six pteropod species identified by detailed morphological methods, including serial semithin sectioning, µCT and SEM scanning supported by multimarker (COI, 28S, and H3) genetic barcoding. We found four species of Gymnosomata slugs (Clione limacina, Clione okhotensis, Notobranchaea grandis and Thliptodon sp.), three species of Euthecosomata snails (Limacina helicina and two genetically delimited Clio spp.) and one shelled pseudothecosome species that is probably new to science (Peracle n. sp.). Multilocus phylogenetic analyses support monophyly of major traditional groups such as Pteropoda, Thecosomata, Pseudothecosomata and Gymnosomata. Micro-CT scanning was applied for the first time on pteropod soft bodies, allowing direct comparison between detailed anatomical peculiarities and molecular barcodes of the respective species. Furthermore, taxonomic positions, geographical ranges and potential dispersal barriers are discussed, with implications for future biodiversity comparisons. This study serves as a solid foundation for monitoring pteropods in a changing ocean.
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  • 33
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    Elsevier
    In:  European Journal of Medicinal Chemistry, 187 . Art.Nr. 111909.
    Publication Date: 2021-01-08
    Description: Hybrid chemical compounds formed by conjugation of two or more bioactive molecules have shown wide variety of applications in biology, microelectronics as well as material sciences. In particular, the conjugates of steroid framework are known to have broad biological activity profile due to their ability to penetrate the biomembranes and bind to specific hormone receptors. Among the various conjugates of steroids, Steroid Amino Acid Conjugates (SAACs) are attractive because of the possibility of fine tuning of the amphiphilicity with position, orientation and nature of amino acids. The structural details, applications, mechanistic insights and their diverse pharmacological as well as other physicochemical properties of several SAACs are summarized in the present review. This review provides better insight for medicinal chemists to design and explore such novel conjugates which can be used as lead structures in the future drug discovery or as probes to understand the complex biological system.
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  • 34
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    Elsevier
    In:  In: Green Sustainable Process for Chemical and Environmental Engineering and Science. , ed. by Inamuddin, Elsevier, Amsterdam, pp. 17-39, 23 pp. ISBN 978-0-12-817386-2
    Publication Date: 2020-05-08
    Description: Microalgal oils are considered an important source of industrially valuable oleochemicals with significant applications ranging from the energy to pharmaceutical sectors. Industrial production of microalgal oil is emerging rapidly; however, the high cost associated with downstream processes may constrain this process. Oils are accumulated intracellularly in oleaginous microalgae in the form of lipid droplets, which in turn require cell wall disruption followed by extraction in order to recover them. Disruption of the microalgal cell is very challenging owing to its distinctive features like high water content, hard cell wall, presence of algaenan, and sporopollenin like biopolymers that in turn create hurdles in efficient extraction of lipids. Various conventional pretreatment methods have been explored to rupture the cellular integrity of microalgal cells to enhance lipid extraction, and each method has certain advantages and disadvantages. Supercritical fluid extraction is the oldest technique for the extraction of valuable compounds from microalgae and is considered an alternative to conventional solvent extraction methods. It has several advantageous features such as being free from organic solvents (and their disposal), environment-friendly, and operating at a mild range of temperature (40–80°C). CO2 is considered to be an ideal supercritical fluid due to its non-toxic, non-flammable, and lipophilic nature. In this chapter, use of supercritical carbon dioxide extraction of lipids from microalgae is discussed and compared with other available lipid extraction methods.
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  • 35
    Publication Date: 2021-01-08
    Description: Cell disruption is regarded as an indispensable pretreatment step before the extraction of microalgae with biomineralized cell walls. Here, two typical microalgae—diatom Chaetoceros gracilis (C. gracilis) and coccolithophore Pleurochrysis carterae (P. carterae)—covered by “hard” biomineralized cell walls were used as starting materials for lipid extraction using liquefied dimethyl ether (DME) without any pretreatment such as drying or cell disruption. The liquefied DME extraction experiments were performed at 25 °C and 0.59 MPa using a semi-continuous, flow-type system. The results of the yield, elemental composition, molecular weight distribution, fatty acid composition, and trace element composition indicated that the performance of liquefied DME extraction was similar to that of Bligh–Dyer extraction and better than that of hexane Soxhlet extraction, despite the latter two methods requiring pre-drying and cell disruption processes. It was also proven that the cell wall of microalgae would not affect lipid extraction of liquefied DME, thereby the liquefied DME extraction method is suitable for extracting lipids from microalgae with biomineralized cell walls. Besides, the lipids extracted by liquefied DME can be further used for biodiesel production.
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  • 36
    Publication Date: 2021-01-08
    Description: In recent years, metagenomic strategies have been widely used to isolate and identify new enzymes from uncultivable components of microbial communities. Among these enzymes, various lipases have been obtained from metagenomic libraries from different environments and characterized. Although many of these lipases have characteristics that could make them interesting for application in biocatalysis, relatively little work has been done to evaluate their potential to catalyze industrially important reactions. In the present article, we highlight the latest research on lipases obtained through metagenomic tools, focusing on studies of activity and stability and investigations of application in biocatalysis. We also discuss the challenges of metagenomic approaches for the bioprospecting of new lipases.
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  • 37
    Publication Date: 2021-01-08
    Description: There are no effective therapies for achondroplasia. An open-label study suggested that vosoritide administration might increase growth velocity in children with achondroplasia. This phase 3 trial was designed to further assess these preliminary findings. Methods This randomised, double-blind, phase 3, placebo-controlled, multicentre trial compared once-daily subcutaneous administration of vosoritide with placebo in children with achondroplasia. The trial was done in hospitals at 24 sites in seven countries (Australia, Germany, Japan, Spain, Turkey, the USA, and the UK). Eligible patients had a clinical diagnosis of achondroplasia, were ambulatory, had participated for 6 months in a baseline growth study and were aged 5 to less than 18 years at enrolment. Randomisation was done by means of a voice or web-response system, stratified according to sex and Tanner stage. Participants, investigators, and trial sponsor were masked to group assignment. Participants received either vosoritide 15·0 μg/kg or placebo, as allocated, for the duration of the 52-week treatment period administered by daily subcutaneous injections in their homes by trained caregivers. The primary endpoint was change from baseline in mean annualised growth velocity at 52 weeks in treated patients as compared with controls. All randomly assigned patients were included in the efficacy analyses (n=121). All patients who received one dose of vosoritide or placebo (n=121) were included in the safety analyses. The trial is complete and is registered, with EudraCT, number, 2015-003836-11. Findings All participants were recruited from Dec 12, 2016, to Nov 7, 2018, with 60 assigned to receive vosoritide and 61 to receive placebo. Of 124 patients screened for eligibility, 121 patients were randomly assigned, and 119 patients completed the 52-week trial. The adjusted mean difference in annualised growth velocity between patients in the vosoritide group and placebo group was 1·57 cm/year in favour of vosoritide (95% CI [1·22–1·93]; two-sided p〈0·0001). A total of 119 patients had at least one adverse event; vosoritide group, 59 (98%), and placebo group, 60 (98%). None of the serious adverse events were considered to be treatment related and no deaths occurred. Interpretation Vosoritide is an effective treatment to increase growth in children with achondroplasia. It is not known whether final adult height will be increased, or what the harms of long-term therapy might be.
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  • 38
    Publication Date: 2021-01-08
    Description: Biofouling is a challenge in global sea-based salmon farming. Norway's salmon-growing industry relies primarily on copper-based antifouling coatings. However, copper is an increasingly recognised environmental hazard, and there is a need to develop alternative antifouling products to prevent biofouling in marine aquaculture. Using field experiments, this study compared the efficacy of six novel antifouling coatings for fish farm nets (two with reduced copper content, three with alternative biocides and one biocide-free coating) against a popular commercial copper coating and uncoated samples. The performance of one of the new coatings with lower copper content was more similar to the commercial copper control while the rest were colonised by biofouling faster and/or at higher abundances. However, none of the tested products were able to prevent biofouling entirely, underlining the importance of the search for alternative and improved antifouling technologies.
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  • 39
    Publication Date: 2021-01-08
    Description: Seagrass meadows are important productive ecosystems; during the Summer period in touristic beaches, such as those located in the high Adriatic coast, seagrasses are removed from the shoreline and disposed in landfill. This study investigated anaerobic digestion potential of beach-cast seagrass wrack, considering the physicochemical characteristics of the substrate and analysing heavy metal presence in the digestate, with the aim of transporting the material to local wastewater treatment plants to increase biogas yield from excess sludge anaerobic digestion. The methane production obtained from seagrass wrack was compared with three theoretical models. Seagrass wrack had a good methane potential of 103.1–262.3 NmL CH4/g Volatile Solids (VS), depending on substrate humidity and applied inoculum-to-substrate ratio. Predictive models, based on elemental composition and proximate analysis, successfully estimated methane yields; heavy metal concentration in digestate was low, boosting for digestate agricultural reuse. A simplified energy analysis revealed that transport to local wastewater treatment plants and use in anaerobic digestion process would provide up to 245,000 Nm3/y of methane, with an estimated economic income of 33,500–193,300 €/y, considering local seagrass production (1,465–8,454 t/y). Actual yearly costs sustained by beach management company for landfill disposal was about 117,200–676,320 €/y. Seagrass reuse in local digesters would compensate for the lack of excess sludge encountered during the cold season, allowing the digester to operate more continuously, increasing biogas production and reducing plant energy need.
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  • 40
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    Elsevier
    In:  In: Handbook of Algal Science, Technology and Medicine. , ed. by Konur, O. Elsevier, San Diego, pp. 675-696.
    Publication Date: 2020-04-08
    Description: The analysis of more than 400 papers found in the literature on Sargassum biosorption has shown the existence of more than 700 equilibrium entries corresponding to data at different temperature and pH conditions. The following ten single metals: Cd, Co, Cr(III, VI), Cu, Fe, Hg, La, Ni, Pb, and Zn, are the main focus of most of the equilibrium data (507) in more than half of the studied references. The studies reflecting the interaction of nine of these metals with Sargassum sp. is described and analyzed. The use of Langmuir equation, the effect of temperature and pH on sorption is critically reviewed. In addition, we also analyze all the data available on elemental chemical composition of native Sargassum. These data reflect the interaction of this kind of marine biomass with nine of the metals mentioned above, which are present in seawater worldwide.
    Type: Book chapter , NonPeerReviewed
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  • 41
    Publication Date: 2021-01-08
    Description: Six new compounds including two azaphilones, lunatoic acids D–E (1, 2), three isocoumarins, lunatinins B–D (3-5), and one α-pyrone derivative, lunatinin E (6), as well as four known ones, lunatoic acid A (7), lunatinin (8), penicipyran D (9) and chaetoquadrin F (10) were isolated from the rice medium of the gut fungus Paraphaeosphaeria sp. XZD2-1. Their planar structures were elucidated by analysis of 1D and 2D NMR as well as HRESIMS spectroscopic data. The absolute configurations of compounds 1-3 were assigned by experimental and calculated ECD data and an ester hydrolysis reaction. Compounds 4 and 5 were a pair of enantiomeric excess mixture. Structure of compound 6 was further confirmed by comparing optical rotation with known compounds according to literature. The antimicrobial activity and cytotoxicity of compounds 1-10 were examined.
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  • 42
    Publication Date: 2021-01-08
    Description: As the frequency and intensity of storms increase, a growing need exists for resilient shore protection techniques that have both environmental and economic benefits. In addition to producing seafood, aquaculture farms may also provide coastal protection benefits either alone or with other nature-based structures. In this paper, a generalized three-layer frequency dependent theoretical model is derived for random wave attenuation due to presence of biomass within the water column. The biomass can be characterized as submerged, emerged, suspended and floating canopies that can consist of natural aquatic vegetation with potential aquaculture systems of kelp or mussels. The present analytical solutions can reduce to the solutions by Mendez and Losada (2004), Chen and Zhao (2012) and Jacobsen et al. (2019) for submerged rigid aquatic vegetation. The present theoretical model incorporates the motion of these canopies using a cantilever-beam model for slender components and a buoy-on-rope model for elements with concentrated mass and buoyancy. Analytical results are compared with existing laboratory and field datasets for submerged and suspended canopies. The theoretical model was then used (in a case study at a field site in Northeastern US) to investigate the capacity of suspended mussel farms with submerged aquatic vegetation (SAV) to dissipate wave energy during a recent storm event. Compared to a dense SAV meadow in shallower water, the suspended aquaculture farms more effectively attenuate random waves with a smaller peak period and the higher frequency components of wave spectrum. The performance of suspended aquaculture farms is less affected by water level changes due to tides, surge and sea level rise, while the wave attenuation performance of SAV decreases with increasing water level due to decreased wave motion near the sea bed. Incorporating suspended aquaculture farms offshore significantly enhance the coastal protection effectiveness of SAV-based living shorelines and extend the wave attenuation capacity over a wider wave period and water level range. The combination of suspended aquaculture farms and traditional living shorelines provides a more effective nature-based coastal defense strategy than the traditional living shorelines alone.
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  • 43
    Publication Date: 2021-01-08
    Description: Application of polyester-degrading enzymes should be considered as an eco-friendly alternative to chemical recycling due to the huge plastic waste disposal nowadays. Many hydrolases from several fungi and bacteria have been discovered and successfully evaluated for their activity towards different aliphatic polyesters (PHA, PBS, PBSA, PCL, PLA), aromatic polyesters (PET, PBT, PMT) as well as their co-polyesters (PBST, PBAT, PBSTIL). This revision gives an up-to-date overview on the main biochemical features and biotechnological applications of those reported enzymes which are able to degrade polyester-based plastics, including different microbial polyester depolymerases, esterases, cutinase-like enzymes and lipases. Summarized information includes available protein sequences with the corresponding accession numbers deposited in NCBI server, 3D resolved structures, and data about optimal conditions for enzymatic activity and stability of many of these microbial enzymes that would be helpful for researchers in this topic. Although screening and identification of new native polyester hydrolases from microbial sources is undeniable according to literature, we briefly highlight the importance of the design of improved enzymes towards recalcitrant aromatic polyesters through different approaches that include site-directed mutagenesis and surface protein engineering.
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  • 44
    Publication Date: 2021-01-08
    Description: The subpopulation of Atlantic cod, Gadus morhua, in the eastern part of the Baltic Sea has experienced a significant increase in infections with anisakid nematode larvae of the species Contracaecum osculatum sensu lato (s.l.) since the year 2000. The life cycle of the parasite includes seals and especially the grey seal, Halichoerus grypus, as final hosts, carrying the adult nematodes in the stomach, crustaceans (copepods, amphipods) as first intermediate hosts and various fish species (clupeids, sandeel) including cod as second intermediate/paratenic hosts. Cod with a body length below 28 cm are generally non-infected but experience increasing infection levels when they switch to a piscine diet (infected intermediate/paratenic hosts). We present an overall frequency distribution analysis of worms in 166 cod (body length 30–49 cm) collected in the spawning area over the last 5 years. It shows a fit to the negative binomial distribution, a prevalence of infection of 89.8%, a mean intensity of 29.3 parasites per fish (range 1–377) and a variance/mean ratio of 59.2 (≫1), indicating overdispersion. We present measurements of the adult Contracaecum osculatum (s.l.) specimens in the seal stomach and show that the parasites reach a maximum length of 6.6 cm (females) and 5.8 cm (males). L3s in sprat have a total length from 1to 11 mm whereas the larvae in cod liver are 3–27 mm. A decreasing mean worm length associated with high worm densities in cod (number of nematodes per liver) was recorded. Possible explanations might include timing of feeding on infected intermediate/paratenic hosts, intraspecific competition (crowding) between larvae in cod and host responses (indicated by a significant antibody production in cod against C. osculatum (s.l.) antigens). A significant negative correlation between infection intensity and muscle mass of cod was found, suggesting parasite-induced down-regulation of growth factors in cod.
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  • 45
    Publication Date: 2021-01-08
    Description: Despite their critical role as the main energy pathway between phytoplankton and fish, the functional complexity of zooplankton is typically poorly resolved in marine ecosystem models. Trait-based approaches—where zooplankton are represented with functional traits such as body size—could help improve the resolution of zooplankton in marine ecosystem models and their role in trophic transfer and carbon sequestration. Here, we present the Zooplankton Model of Size Spectra version 2 (ZooMSSv2), a functional size-spectrum model that resolves nine major zooplankton functional groups (heterotrophic flagellates, heterotrophic ciliates, larvaceans, omnivorous copepods, carnivorous copepods, chaetognaths, euphausiids, salps and jellyfish). Each group is represented by the functional traits of body size, size-based feeding characteristics and carbon content. The model is run globally at 5° resolution to steady-state using long-term average temperature and chlorophyll a for each grid-cell. Zooplankton community composition emerges based on the relative fitness of the different groups. Emergent steady-state patterns of global zooplankton abundance, biomass and growth rates agree well with empirical data, and the model is robust to changes in the boundary conditions of the zooplankton. We use the model to consider the role of the zooplankton groups in supporting higher trophic levels, by exploring the sensitivity of steady-state fish biomass to the removal of individual zooplankton groups across the global ocean. Our model shows zooplankton play a key role in supporting fish biomass in the global ocean. For example, the removal of euphausiids or omnivorous copepods caused fish biomass to decrease by up to 80%. By contrast, the removal of carnivorous copepods caused fish biomass to increase by up to 75%. Our results suggest that including zooplankton complexity in ecosystem models could be key to better understanding the distribution of fish biomass and trophic efficiency across the global ocean.
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  • 46
    Publication Date: 2021-01-08
    Description: Mitigating human contributions to climate change is a highly debated topic, as it becomes evident that many nations do not adhere to optional reductions in global emission. Substantial research is taking place into negative carbon technologies that actively reduce the amount of atmospheric carbon dioxide (CO2) via greenhouse gas removal (GGR). Various GGR methods have been proposed, from reforestation to ocean fertilisation. This article discusses advantages of an approach based on enhanced input of tephra to the ocean, to increase the drawdown of atmospheric CO2. Natural addition of tephra to the ocean results in preservation of enhanced organic matter in sediment. Hence, augmenting its delivery should raise the level of sequestration. Calculations indicate that offshore tephra addition could sequester 2750 tonnes of CO2 per 50,000 tonnes of ash delivered (a typical bulk carrier’s capacity). The cost is estimated as ∼$55 per tonne of CO2 sequestered and is an order of magnitude cheaper than many proposed GGR technologies. Further advantages include: tephra addition is simply an augmentation of a natural Earth process, it is a low technology approach that requires few developments, and it may sequester carbon for thousands of years. Hence, offshore tephra addition warrants further investigation to assess its viability.
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  • 47
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    Unknown
    Elsevier
    In:  Progress in Oceanography, 189 . Art.-Nr.: 102452.
    Publication Date: 2021-02-08
    Description: Subsurface-intensified anticyclones are ubiquitous in the ocean, yet their impact on the large-scale transport of heat, salt and chemical tracers is poorly understood. These submesoscale coherent vortices (SCVs) can trap and advect waters thousands of kilometers away from the formation region, providing a transport pathway that is unresolved by low-resolution Earth System Models. However, knowledge of the importance of these eddies for the large scale circulation is hindered by the lack of systematic observations. Here, we take advantage of the global network of Argo floats to identify occurrences of these eddies, which appear as weakly stratified anomalous water masses with Gaussian-shaped vertical structures. We develop a general algorithm to detect subsurface eddies that have propagated away from their source region, and apply it to the database of Argo float profiles, resulting in roughly 4000 detections from more than 20 years of observations. We further group detections into regional populations to identify hot-spots of generation and mechanisms of formation. Analysis of regional SCV statistics reveals important sites of SCV generation in Eastern Boundary Upwelling Systems, marginal sea overflows, and mode water formation regions along major open-ocean fronts. Because of the heat and salt anomaly contained within their cores, SCV could leave a significant imprint on the hydrographic properties of water masses in regions of high SCV density.
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  • 48
    Publication Date: 2021-01-08
    Description: Used during an oil spill to minimise the formation of an oil slick, dispersants have negative biological effects on marine model organisms. However, no study has investigated the impacts of dispersants on adult sponge individuals. Here, we examine the effects of water accommodated oil fraction (WAF - oil in seawater), chemically enhanced WAF (CEWAF - oil and dispersant in seawater) and Benzo[A]Pyrene on sponge Halichondria panicea at physiological and molecular levels. Sponge clearance rate decreased sharply when exposed to WAF and CEWAF but the oil loading at which the clearance rate was reduced by 50% (ED50) was 39-fold lower in CEWAF than in WAF. Transcriptomic analysis revealed a homogenous molecular response with the greatest number of differentially expressed genes identified in CEWAF samples (1,461 genes). Specifically, genes involved in stress responses were up-regulated. This study presents evidence that the use of dispersants should be considered carefully in areas where sponges are present.
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  • 49
    Publication Date: 2021-01-08
    Description: This study evaluated the application of a Halobacteriovorax isolated from water of the Adriatic Sea (Italy) in controlling V. parahaemolyticus in mussels (Mytilus galloprovincialis). Two 72 h laboratory-scale V. parahaemolyticus decontamination experiments of mussels were performed. The test microcosm of experiment 1 was prepared using predator/prey free mussels experimentally contaminated with Halobacteriovorax/V. parahaemolyticus at a ratio of 103 PFU/105 CFU per ml, while that of experiment 2 using mussels naturally harbouring Halobacteriovorax that were experimentally contaminated with 105 CFU per ml of V. parahaemolyticus. For experiment 1, was also tested a control microcosm only contaminated with 105 CFU per ml of V. parahaemolyticus.. Double layer agar plating and pour plate techniques were used to enumerate Halobacteriovorax and V. parahaemolyticus, respectively. 16 S rRNA analysis was used to identify Halobacteriovorax. For both experiments in the test microcosm the concentration of prey remained at the same level as that experimentally added, i.e. 5 log for the entire analysis period. In experiment 1, V. parahaemolyticus counts in mussels were significantly lower in the test microcosm than the control with the maximum difference of 2.2 log at 24 h. Results demonstrate that Halobacteriovorax can modulate V. parahaemolyticus level in the mussels. The public impact of V. parahaemolyticus in bivalves is relevant and current decontamination processes are not always effective. Halobacteriovorax is a suitable candidate in the development of a biological approach to the purification of V. parahaemolyticus in mussels.
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  • 50
    Publication Date: 2021-01-08
    Description: The ctenophore Mnemiopsis leidyi, ranking among the 100 most damaging bioinvaders in the world, is a major predator of zooplankton, known to alter the biodiversity and functioning of the ecosystems in which it has been introduced. This first survey on the trophic relationships of M. leidyi in a Mediterranean lagoon (Berre, South of France) was performed through stable isotope analyses. Carbon and nitrogen isotope composition was used (1) to determine the types of prey ingested by this ctenophore and (2) the influence of individual size on its isotope composition, and (3) to make assumptions to explore its trophic relationships with the native jellyfish Aurelia sp.. The two gelatinous species ingested mainly (79% to 97% of the diet) planktonic prey (copepods, cirriped nauplii, gastropod larvae and cladocerans), but also preyed upon benthic organisms (mainly harpacticoid copepods and the amphipod Monocorophium insidiosum) in lower proportions (2.5% to 21%). Size-related changes in M. leidyi diet were evidenced with an increase in trophic level and benthic prey consumption in the larger individuals. These two gelatinous organisms probably play an important and underestimated role in the benthic–pelagic​ coupling in coastal lagoons by transferring benthic organic matter to the pelagic food webs.
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  • 51
    Publication Date: 2018-03-08
    Description: Brackish coastal groundwater is enriched in Ra, which is transported to surface waters via submarine groundwater discharge (SGD). The Ra activity of the SGD end-member is influenced by a variety of environmental factors including salinity, pH, and isotope half-life. In the York River estuary (YRE), 223Ra, 224Ra, and 226Ra were measured in surface water and shallow groundwater across a range of salinities and additional Ra sources quantified (desorption and diffusion from sediments, input from tidal marshes). The Ra budget of the estuary indicated a major source of Ra that could only be satisfied by SGD. The apparent Ra flux was combined with groundwater Ra end-member activity to estimate SGD volume fluxes of 5–178 L m− 2 d− 1. Each isotope exhibited a different seasonal pattern, with significantly higher 224Ra flux during summer than winter, lower 226Ra SGD flux during summer than winter, and no seasonal differences in 223Ra SGD flux. However, the SGD 224Ra end-member activity varied with seasonal pore water salinity fluctuations, indicating end-member control on seasonal 224Ra flux. Each Ra isotope suggested a different SGD volume flux, indicating that different nuclide regeneration rates may respond to and reflect different flow mechanisms in the subterranean estuary. This work indicates that volume fluxes estimated using geochemical tracers are sensitive to SGD end-member variations and end-member variability must be well-characterized for reliable SGD flux estimates.
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  • 52
    Publication Date: 2017-10-12
    Description: In this paper we present an in-depth analysis and synthesis of published and newly acquired data on the chemical and isotopic composition of forearc fluids, fluid fluxes, and the associated thermal regimes in well-studied, representative erosional and accretionary subduction zone (SZ) forearcs. Evidence of large-scale fluid flow, primarily focused along faults, is manifested by widespread seafloor venting, associated biological communities, extensive authigenic carbonate formation, chemical and isotopic anomalies in pore-fluid depth-profiles, and thermal anomalies. The nature of fluid venting seems to differ at the two types of SZs. At both, fluid and gas venting sites are primarily associated with faults. The décollement and coarser-grained stratigraphic horizons are the main fluid conduits at accretionary SZs, whereas at non-accreting and erosive margins, the fluids from compaction and dehydration reactions are to a great extent partitioned between the décollement and focused conduits through the prism, respectively. The measured fluid output fluxes at seeps are high, ∼15–40 times the amount that can be produced through local steady-state compaction, suggesting that in addition, other fluid sources or non-steady-state fluid flow must be involved. Recirculation of seawater must be an important component of the overall forearc output fluid flux in SZs. The most significant chemical and isotopic characteristics of the expelled fluids relative to seawater are: Cl dilution; sulfate, Ca, and Mg depletions; and enrichments in Li, B, Si, Sr, alkalinity, and hydrocarbon concentrations, often distinctive δ18O, δD, δ7Li, δ11B, and δ37Cl values, and variable Sr isotope ratios. These characteristics provide key insights on the source of the fluid and the temperature at the source. Based on the fluid chemistry, the most often reported source temperatures reported are 120–150 °C. We estimate a residence time of the global ocean in SZs of ∼100 Myr, about five times faster than the previous estimate of ∼500 Myr by Moore and Vrolijk, similar to the residence time of ∼90 Myr for fluids in the global ridge crest estimated by Elderfield and Schultz, and ∼3 times longer than the 20–36 Myr estimate by German and von Damm and Mottl. Based on this extrapolated fluid reflux to the global ocean, subduction zones are an important source and sink for several elements and isotopic ratios, in particular an important sink for seawater sulfate, Ca and Mg, and an important source of Li and B.
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  • 53
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    Elsevier
    In:  In: Treatise on Geochemistry. Reference Module in Earth Systems and Environmental Sciences, 5 . Elsevier, Amsterdam, pp. 385-404. 2.Ed. ISBN 978-0-08-099946-3
    Publication Date: 2018-04-19
    Description: A very close coupling exists between changes in atmospheric O2 and CO2 concentrations, owing to the chemistry of photosynthesis, respiration, and combustion. The coupling is not perfect, however, because CO2 variations are partially buffered by reactions involving the inorganic carbon system in seawater, which has no effect on O2. Measurements over the past two decades document variations in O2 on a range of space and time scales, including a long-term decrease driven mostly by fossil fuel burning and seasonal cycles driven by exchanges with the land biosphere and the oceans. In this chapter, these and other features seen in the measurements are described, also discussing variations in the tracer ‘atmospheric potential oxygen,’ which is a linear combination of O2 and CO2 designed to be insensitive to exchanges from the land biosphere and thereby sensitive mostly to oceanic processes. Challenges associated with measuring variations in O2 are addressed, and various applications of the observations are discussed, including quantifying the magnitude of the global land and ocean carbon sinks and testing ocean biogeochemical models. An updated budget for global carbon sinks based on O2 measurements from the Scripps O2 program is presented for the decades of the 1990s and 2000s.
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  • 54
    Publication Date: 2020-07-09
    Description: Marine laminated sediments in dysoxic areas of the ocean floor are an excellent archive for high-resolution climate reconstructions. While the existence of discontinuities produced by natural events, such as underwater landslides (slumps), strong bottom currents, and/or bioturbation is usually acknowledged for long records, the extent of their influence on high-resolution sequences is usually not considered. In the present work we show strong evidence for multiple stratigraphic discontinuities in different gravity and box-cores retrieved off Pisco (Peru) covering the last 600 years. Chronostratigraphies are largely based on cross-correlation of distinct sedimentary structures (determined by X-ray image analysis) and validated using 210Pb, 241Am, and 14C profiles, as well as proxy records. The cross-correlation of distinct stratigraphic layers allows for chronostratigraphic tie points and clearly shows that some sedimentary sequences are continuous across scales of tens of kilometers, indicating that regional processes often determine laminae formation. Some differences in laminae thickness were found among cores, which could be explained by different sedimentation rates, spatially variable deposition of diatom blooms, changes in silica dissolution and partial deposition/erosion caused by bottom currents. Using multiple stratigraphic tie points provides clear evidence for laminated sequences present in some cores to be missing in other cores. Moreover, instantaneous depositions from upslope were identified in all the cores disrupting the continuity of the sediment records. These discontinuities (instantaneous deposits and missing sequences) may be due to slumps, possibly triggered by earthquakes and/or erosion by strong bottom currents. In spite of the missing sequences in some cores, a continuous composite record of the last six centuries was reconstructed from spliced sequences of the different cores, which provides a well-constrained temporal framework to develop further high-resolution proxies in this region. The present work shows that paleoreconstructions developed from single cores, particularly in areas with strong seismic activity and/or strong bottom currents, are subject to both temporal gaps and instantaneous depositions from upslope, both of which could be misinterpreted as abrupt climate changes or anomalous climate events. We stress the need for multiple cores to determine the stratigraphic continuity and chronologies for high-resolution records.
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  • 55
    Publication Date: 2017-07-14
    Description: Kelp forests represent a major habitat type in coastal waters worldwide and their structure and distribution is predicted to change due to global warming. Despite their ecological and economical importance, there is still a lack of reliable spatial information on their abundance and distribution. In recent years, various hydroacoustic mapping techniques for sublittoral environments evolved. However, in turbid coastal waters, such as off the island of Helgoland (Germany, North Sea), the kelp vegetation is present in shallow water depths normally excluded from hydroacoustic surveys. In this study, single beam survey data consisting of the two seafloor parameters roughness and hardness were obtained with RoxAnn from water depth between 2 and 18 m. Our primary aim was to reliably detect the kelp forest habitat with different densities and distinguish it from other vegetated zones. Five habitat classes were identified using underwater-video and were applied for classification of acoustic signatures. Subsequently, spatial prediction maps were produced via two classification approaches: Linear discriminant analysis (LDA) and manual classification routine (MC). LDA was able to distinguish dense kelp forest from other habitats (i.e. mixed seaweed vegetation, sand, and barren bedrock), but no variances in kelp density. In contrast, MC also provided information on medium dense kelp distribution which is characterized by intermediate roughness and hardness values evoked by reduced kelp abundances. The prediction maps reach accordance levels of 62% (LDA) and 68% (MC). The presence of vegetation (kelp and mixed seaweed vegetation) was determined with higher prediction abilities of 75% (LDA) and 76% (MC). Since the different habitat classes reveal acoustic signatures that strongly overlap, the manual classification method was more appropriate for separating different kelp forest densities and low-lying vegetation. It became evident that the occurrence of kelp in this area is not simply linked to water depth. Moreover, this study shows that the two seafloor parameters collected with RoxAnn are suitable indicators for the discrimination of different densely vegetated seafloor habitats in shallow environments.
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  • 56
    Publication Date: 2017-12-13
    Description: The convergence between the Indian plate and the southern margin of the Eurasian continent created an active continental margin from Late Jurassic until about 40 Ma ago, which then evolved to form the Himalaya and the Tibetan Plateau during the continental collision stage. Post-collisional magmatism in southern Tibet, north of the Yarlung Zangbo Suture Zone (YZSZ) has been active since 45 Ma and is related to normal faulting and extensional tectonism. To date no such magmatism was reported within the YZSZ itself. This paper reports on the discovery of Miocene shoshonites within the YZSZ. They are significant because the magma traveled, at least in part, through oceanic crust, thus limiting interaction with the continental crust to the mid-crustal level and which affected the post-collisional magmatic rocks occurring in the northern part of the subduction system. In addition, xenoliths and xenocrysts of crustal origin in these rocks constrain the nature of metamorphic rocks underlying the YZSZ at mid-crustal level. The geochemical signatures of the shoshonitic rocks, including Nd and Sr isotope systematics, indicate derivation from a garnet-bearing middle continental crustal source. Crustal imprint complicates modeling of the petrogenetic processes which occurred prior to mid-crustal ponding of the magma which took place between 11 and 17 Ma at depths of 40 to 50 km. The significant role of crustal contamination raises serious concerns about models proposed for similar magmatic activity elsewhere in the Himalaya and the Tibetan Plateau.
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  • 57
    Publication Date: 2017-12-13
    Description: Arc magmas are commonly assumed to form by melting of sub-arc mantle that has been variably enriched by a component from the subducted slab. Although most magmas that reach the surface are not primitive, the impact of assimilation of the arc crust is often ignored with the consequence that trace element and isotopic compositions are commonly attributed only to varying contributions from different components present in the mantle. This jeopardises the integrity of mass balance recycling calculations. Here we use Sr and O isotope data in minerals from a suite of volcanic rocks from St Lucia, Lesser Antilles arc, to show that assimilation of oceanic arc basement can be significant. Analysis of 87Sr/86Sr in single plagioclase phenocrysts from four Soufrière Volcanic Complex (SVC; St Lucia) hand samples with similar composition (87Sr/86Sr = 0.7089–0.7091) reveals crystal isotopic heterogeneity among hand samples ranging from 0.7083 to 0.7094 with up to 0.0008 difference within a single hand sample. measurements in the SVC crystals show extreme variation beyond the mantle range with +7.5 to ‰ for plagioclase (), +10.6 to ‰ for quartz (), +9.4 to ‰ for amphibole () and +9 to ‰ for pyroxene () while older lavas (Pre-Soufriere Volcanic Complex), with less radiogenic whole rock Sr composition (87Sr/86Sr = 0.7041–0.7062) display values closer to mantle range: +6.4 to ‰ for plagioclase () and +6 to ‰ for pyroxene (). We argue that the 87Sr/86Sr isotope disequilibrium and extreme values provide compelling evidence for assimilation of material located within the arc crust. Positive correlations between mineral and whole rock 87Sr/86Sr, 143Nd/144Nd and 206,207,208Pb/204Pb shows that assimilation seems to be responsible not only for the isotopic heterogeneity observed in St Lucia but also in the whole Lesser Antilles since St Lucia encompasses almost the whole-arc range of isotopic compositions. This highlights the need for detailed mineral-scale investigation of oceanic arc suites to quantify assimilation that could otherwise lead to misinterpretation of source composition and subduction processes.
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  • 58
    Publication Date: 2017-11-03
    Description: Two discontinuous tephra layers were discovered at Burney Spring Mountain, northern California. Stratigraphic relationships suggest that they are two distinct primary fall tephras. The geochemistries of these tephras from electron probe microanalysis were compared with those of known layers found in the area to test for potential correlations, using clustering analysis on geochemistry. In most cases, geochemical data from a tephra layer can be assigned to a single cluster, but in some cases the analyses are spread over several clusters. This spreading is a direct result of mixing and reworking of several tephra layers. The mixing, in turn, appears to be related to the influence of wind in a marshy environment.
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  • 59
    Publication Date: 2018-03-21
    Description: Stock‐based and ecosystem‐based indicators are used to provide a new diagnosis of the fishing impact and environmental status of European seas. In the seven European marine ecosystems covering the Baltic and the North‐east Atlantic, (i) trends in landings since 1950 were examined; (ii) syntheses of the status and trends in fish stocks were consolidated at the ecosystem level; and (iii) trends in ecosystem indicators based on landings and surveys were analysed. We show that yields began to decrease everywhere (except in the Baltic) from the mid‐1970s, as a result of the over‐exploitation of some major stocks. Fishermen adapted by increasing fishing effort and exploiting a wider part of the ecosystems. This was insufficient to compensate for the decrease in abundance of many stocks, and total landings have halved over the last 30 years. The highest fishing impact took place in the late 1990s, with a clear decrease in stock‐based and ecosystem indicators. In particular, trophic‐based indicators exhibited a continuous decreasing trend in almost all ecosystems. Over the past decade, a decrease in fishing pressure has been observed, the mean fishing mortality rate of assessed stocks being almost halved in all the considered ecosystems, but no clear recovery in the biomass and ecosystem indicators is yet apparent. In addition, the mean recruitment index was shown to decrease by around 50% in all ecosystems (except the Baltic). We conclude that building this kind of diagnosis is a key step on the path to implementing an ecosystem approach to fisheries management.
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  • 60
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    Elsevier
    In:  In: Treatise on Geochemistry Vol. 8: The oceans and marine geochemistry. , ed. by Elderfield, H. and Holland, H. D. Elsevier, Amsterdam, pp. 151-189.
    Publication Date: 2017-01-18
    Type: Book chapter , NonPeerReviewed
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  • 61
    Publication Date: 2017-06-19
    Description: The scleractinian cold-water corals (CWC) Lophelia pertusa and Madrepora oculata represent two major deep-sea reef-forming species that act as key ecosystem engineers over a wide temperature range, extending from the northern Atlantic (ca. 5–9 °C) to the Mediterranean Sea (ca. 11–13 °C). Recent research suggests that environmental parameters, such as food supply, settling substrate availability or aragonite saturation state may represent important precursors controlling habitat suitability for CWC. However, the effect of one principal environmental factor, temperature, on CWC key physiological processes is still unknown. In order to evaluate this effect on calcification, respiration, and dissolved organic carbon (DOC) net flux, colonies of Mediterranean L. pertusa and M. oculata were acclimated in aquaria to three temperatures (12, 9 and 6 °C), by consecutive decrements of 1 month duration. L. pertusa and M. oculata maintained at Mediterranean control conditions (i.e. 12 °C) displayed constant rates, on average respiring 4.8 and 4.0 µmol O2 cm−2 coral surface area d−1, calcifying 22.3 and 12.3 µmol CaCO3 g−1 skeletal dry weight d−1 and net releasing 2.6 and 3.1 µmol DOC cm−2 coral surface area d−1, respectively. Respiration of L. pertusa was not affected by lowered temperatures, while M. oculata respiration declined significantly (by 48%) when temperature decreased to 9 °C and 6 °C relative to controls. L. pertusa calcification at 9 °C was similar to controls, but decreased significantly (by 58%) at 6 °C. For M. oculata, calcification declined by 41% at 9 °C and by 69% at 6 °C. DOC net flux was similar throughout the experiment for both CWC. These findings reveal species-specific physiological responses by CWC within their natural temperature range. L. pertusa shows thermal acclimation in respiration and calcification, while these mechanisms appear largely absent in M. oculata. Conclusively, species-specific thermal acclimation may significantly affect the occurrence and local abundance of cosmopolitan CWC species, consequently influencing their important role in habitat engineering and ecosystem functioning in various thermal environments. Keywords
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  • 62
    Publication Date: 2017-06-19
    Description: Dissolved organic matter, which contains many compounds such as lipids, sugars and amino acids, is an important source of carbon and nitrogen for several symbiotic and asymbiotic tropical coral species. However, there is still no information on its possible uptake by cold-water coral species. In this study, we demonstrated that dissolved organic matter, in the form of dissolved free amino acids (DFAA), is actively absorbed by four cold-water coral species from the Mediterranean Sea. Although the uptake rates observed with 3 µM DFAA concentration were one order of magnitude lower than those observed in tropical species, they corresponded to 12–50% of the daily excreted-nitrogen, and 16–89% of the daily respired-carbon of the cold-water corals. Consequently, DFAA, even at in situ concentrations lower than those tested in this study, can supply a significant amount of carbon and nitrogen to the corals, especially during periods when particulate food is scarce.
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  • 63
    Publication Date: 2017-07-14
    Description: Redox-sensitive trace metals (Mn, Fe, U, Mo, Re), nutrients and terminal metabolic products (NO3-, NH4+, PO43-, total alkalinity) were investigated for the first time in pore waters of Antarctic coastal sediments. The results of this study reveal a high spatial variability in redox conditions in surface sediments from Potter Cove, King George Island, western Antarctic Peninsula. Particularly in the shallower areas of the bay the significant correlation between sulphate depletion and total alkalinity, the inorganic product of terminal metabolism, indicates sulphate reduction to be the major pathway of organic matter mineralisation. In contrast, dissimilatory metal oxide reduction seems to be prevailing in the newly ice-free areas and the deeper troughs, where concentrations of dissolved iron of up to 700 μM were found. We suggest a combination of several factors to be responsible for the domination of metal oxide reduction over sulphate reduction in these areas. These include the increased accumulation of fine-grained material with high amounts of reducible metal oxides, a reduced availability of metabolisable organic matter and an enhanced physical and biological disturbance by bottom water currents, ice scouring and burrowing organisms. Based on modelled iron fluxes we calculate the contribution of the Antarctic shelf to the pool of potentially bioavailable iron (Feb) to be 6.9 × 103 to 790 × 103 t yr-1. Consequently, these shelf sediments would provide an Feb flux of 0.35-39.5 mg m-2 yr-1 (median: 3.8 mg m-2 yr-1) to the Southern Ocean. This contribution is in the same order of magnitude as the flux provided by icebergs and significantly higher than the input by aeolian dust. For this reason suboxic shelf sediments form a key source of iron for the high nutrient-low chlorophyll (HNLC) areas of the Southern Ocean. This source may become even more important in the future due to rising temperatures at the WAP accompanied by enhanced glacier retreat and the accumulation of melt water derived iron-rich material on the shelf.
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  • 64
    Publication Date: 2017-09-22
    Description: Compared with microscopic indices such as biomass, inverted satellite images can reflect cyanobacterial blooms from a macroscopic perspective, can provide planar information for blooms, and can more definitely reflect the occurrence of visible cyanobacterial blooms. We therefore adopted inverted images (from MODIS imagery) to judge whether cyanobacterial blooms had occurred in a water area at a given time. We constructed two probit models for identifying significant environmental factors related to cyanobacterial bloom occurrence and for short-term forecasts of bloom occurrence. The models used the index of cyanobacterial bloom occurrence as the dependent variable and the predicted variable, respectively, and used three categories (water quality, hydrology, and weather) of monitoring variables as the independent variables (or predictive variables). We used the Hill Dagong water area of Lake Tai in China as a case study of the new methods. The results produced by the identification model are consistent with the general conclusions in this research field indicating the validity of the model. The mean relative error of the forecast model is 13.5%, which is close to or lower than that of two previous models. Compared with the previous models, our forecast model also has advantages in terms of spatial and temporal precision. The new models have both practical applicability and the ability to be generalized and can, therefore, be easily adapted for the prevention, control, and prediction of cyanobacterial blooms in other bodies of water.
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  • 65
    Publication Date: 2017-07-14
    Description: Fresh volcanic glasses from the extrusive section of the Troodos Ophiolite in Akaki Canyon are tholeiitic and basaltic to dacitic in composition. Compared to normal MORB they have extremely low fractionation corrected Na8, Fe8 and Ti8 and are enriched in fluid-mobile trace elements, including U, Ba, Rb, Sr and Pb, relative to non-fluid mobile elements of similar incompatibility. Trace element compositions of Akaki lavas define an array extending between ‘back-arc lava’-like compositions, and the field defined by Troodos boninites from the upper part of the lava sequence. Troodos lavas were derived from a mantle source that underwent early melt depletion, and later enrichment by both fluids and small degree melts. These processes can explain the unusual negative correlation of Pb/Ce with Zr/Nb and Ba/Nb in Troodos extrusives. Although some Troodos lavas are similar in composition to lavas from back-arc spreading centres, the boninites from the upper parts of the lava pile do not appear to have exact compositional equivalents among lavas from fore-arcs, back-arcs or other tectonic settings where similar rocktypes have been recovered. We suggest that the geochemical evolution inferred for the mantle source of Troodos lavas, together with geological evidence is most consistent with an origin for the Troodos Ophiolite at a spreading centre close to a ridge–trench–trench, or ridge–trench–transform triple junction, where highly depleted, subduction-modified, fluid-enriched mantle wedge material was able to upwell and decompress to shallow depths in a ‘fore-arc’ location. In such a tectonic setting, arc volcanism is captured by the spreading centre, explaining the lack of evidence for subaerial arc magmatism in Troodos. Rapid lateral migration of the triple junction could account for the similar ages of other Tethyan supra-subduction zone ophiolites.
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  • 66
    Publication Date: 2018-05-04
    Description: The geochemical features of the volatiles dissolved in artesian thermal waters discharged over three basins (Millungera, Galilee and Cooper basin) of the Australian Great Artesian Basin (GAB) consistently indicate the presence of fluids from multiple gas sources located in the crust (e.g. sediments, oil reservoirs, granites) as well as minor but detectable contributions of mantle/magma-derived fluids. The gases extracted from 19 water samples and analyzed for their chemical and isotopic composition exhibit amounts of CO2 up to about 340 mlSTP/LH2O marked by a δ13CTDC (Total Dissolved Carbon) ranging from − 16.9 to + 0.18‰ vs PDB, while CH4 concentrations vary from 4.4 × 10− 5 to 4.9 mlSTP/LH2O. Helium contents were between 9 and 〉 2800 times higher than equilibrium with Air Saturated Water (ASW), with a maximum value of 0.12 mlSTP/LH2O. Helium isotopic composition was in the 0.02–0.21 Ra range (Ra = air-normalized 3He/4He ratio). The three investigated basins differ from each other in terms of both chemical composition and isotopic signatures of the dissolved gases whose origin is attributed to both mantle and crustal volatiles. Mantle He is present in the west-central and hottest part of the GAB despite no evidence of recent volcanism. We found that the partial pressure of helium, significantly higher in crustal fluids than in mantle-type volatiles, enhances the crustal He signature in the dissolved gases, thus masking the original mantle contribution. Neotectonic activity involving deep lithospheric structures and magma intrusions, highlighted by recent geophysical investigations, is considered to be the drivers of mantle/magmatic volatiles towards the surface. The results, although pertaining to artesian waters from a vast area of 〉 542,000 km2, provide new constraints on volatile injection, and show that fluids' geochemistry can provide additional and independent information on the geo-tectonic settings of the Great Artesian Basin and its geothermal potential.
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  • 67
  • 68
    Publication Date: 2015-01-09
    Description: The final phase of the closure of the Panamanian Gateway and the intensification of Northern Hemisphere Glaciation (NHG) both occurred during the Late Pliocene. Glacial–interglacial (G–IG) variations in sea level might, therefore, have had a significant impact on the remaining connections between the East Pacific and the Caribbean. Here, we present combined foraminiferal Mg/Ca and δ 18O measurements from Ocean Drilling Program (ODP) Site 1241 from the East Pacific and ODP Site 999 from the Caribbean. The studied time interval covers the first three major G–IG Marine Isotope Stages (MIS 95–100, ∼2.5 Ma∼2.5 Ma) after the intensification of NHG. Analyses were performed on the planktonic foraminifera Neogloboquadrina dutertrei and Globigerinoides sacculifer, representing water mass properties in the thermocline and the mixed-layer, respectively. Changes in sea water temperature, relative salinity, and water column stratification strongly suggest that the Panamanian Gateway temporarily closed during glacial MIS 98 and 100, as a result of changes in ice volume equivalent to a drop in sea level of 60–90 m. Reconstructed sea surface temperatures (SST) from G. sacculifer show a glacial decrease of 2.5 °C at Site 1241, but increases of up to 3 °C at Site 999 during glacial MIS 98 and 100 suggesting that the Panamanian Gateway closed during these glacial periods. The Mg/Ca-temperatures of N. dutertrei remain relatively stable in the East Pacific, but do show a 3 °C warming in the Caribbean at the onset of these glacial periods suggesting that the closing of the gateway also changed the water column stratification. We infer that the glacial closure of the gateway allowed the Western Atlantic Warm Pool to extend into the southern Caribbean, increasing SST (G. sacculifer) and deepening the thermocline (N. dutertrei). Additionally, ice volume appears to have become large enough during MIS 100 to survive the relatively short lasting interglacial MIS 99 so that the gateway remained closed. Towards the end of MIS 98, during MIS 97 and into MIS 96 temperatures on both sides are mostly similar suggesting water masses exchanged again. Additionally, Caribbean variations in SST and δ18Owater follow a precession-like cyclicity rather than the obliquity-controlled variations characteristic of the East Pacific and many other tropical areas, suggesting that regional atmospheric processes related to the trade winds and the InterTropical Convergence Zone (ITCZ) had a dominant impact in the Caribbean.
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  • 69
    Publication Date: 2015-01-12
    Description: The impact of mesoscale activity on phytoplankton and nutrient distribution in the Mozambique Channel was simulated by coupling a biogeochemical model (PISCES) with a regional oceanic model (ROMS). Examples of the effects of eddies on the biogeochemistry of the Mozambique Channel are presented to illustrate the complexity of the system. In the model, several cyclonic eddies were found with low concentrations of chlorophyll at their cores, which contrasts with previous studies in the open ocean. In addition, several anticyclonic eddies were simulated with high concentrations of chlorophyll at their cores. Phytoplankton growth within these mesoscale features (both cyclonic and anticyclonic eddies) occurred in response to nutrient injection into the euphotic zone by advection, and subsequent retention of surrounding nutrient-rich waters within eddies. Offshore nutrient distributions depended strongly on lateral advection of nutrient-rich water from the coastal regions, induced by eddy interaction with the shelf. The environmental conditions at the locations where eddies were generated had an important effect on nutrient concentrations within these structures.
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  • 70
    Publication Date: 2017-07-19
    Description: Highlights: • A DEB model for M. leidyi was parameterized using 60 datasets from literature. • 12 °C might already be outside the optimal temperature range. • M. leidyi has high reserve turnover rates and a high structural component. • Delayed metabolic acceleration confers flexibility in controlling generation time. Abstract: Mnemiopsis leidyi is an invasive comb jelly which has successfully established itself in European seas. The species is known to produce spectacular blooms yet it is holoplanktonic and not much is known about its population dynamics in between. One way to gain insight on how M. leidyi might survive between blooms and how it can bloom so fast is to study how the metabolism of this species actually responds to environmental changes in food and temperature over its different life-stages. To this end we combined modelling and data analysis to study the energy budget of M. leidyi over its full life-cycle using Dynamic Energy Budget (DEB) theory and literature data. An analysis of data obtained at temperatures ranging from 8 to 30 °C suggests that the optimum thermal tolerance range of M. leidyi is higher than 12 °C. Furthermore M. leidyi seems to undergo a so-called metabolic acceleration after hatching. Intriguingly, the onset of the acceleration appears to be delayed and the data do not yet exist which allows determining what actually triggers it. It is hypothesised that this delay confers a lot of metabolic flexibility by controlling generation time. We compared the DEB model parameters for this species with those of another holoplanktonic gelatinous zooplankton species (Pelagia noctiluca). After accounting for differences in water content, the comparison shows just how fundamentally different the two energy allocation strategies are. P. noctiluca has an extremely high reserve capacity, low turnover times of reserve compounds and high resistance to shrinking. M. leidyi adopts the opposite strategy: it has a low reserve capacity, high turnover rates of reserve compounds and fast shrinking.
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  • 71
    Publication Date: 2017-10-05
    Description: Total organic carbon (TOC) content of marine sediments represents residual carbon, originally derived from terrestrial and marine sources, which has survived seafloor and shallow subseafloor diagenesis. Ultimately, its preservation below the sulfate reduction zone in marine sediments drives methanogenesis. Within the gas hydrate stability zone (GHSZ), methane production along continental margins can supersaturate pore fluids and lead to the formation of gas hydrate. In this paper we examine the inventory and sources of TOC in sediments collected from four regions within the GHSZ along the Indian continental margins. The recovered sediments vary in age from Oligocene to recent. Mean TOC abundance is greatest in the Krishna-Godavari (K-G) Basin and decreases progressively to the Mahanadi basin, Andaman wedge, and Kerala-Konkan (K-K) Basin. This decrease in TOC is matched by a progressive increase in biogenic CaCO3 and increasing distance from terrestrial sources of organic matter and lithogenic materials. Organic carbon sources inferred from C/N and delta C-13(TOC) range from terrestrial (K-G Basin) to mixed marine and terrestrial (Mahanadi Basin), to marine dominant (Andaman wedge and K-K Basin). In the K-G Basin, variation in the bulk delta C-13(TOC) is consistent with changes in C-3 and C-4 vegetation driven by monsoon variability on glacial-interglacial timescales, whereas in the Mahanadi Basin a shift in the delta C-13(TOC) likely reflects the onset of C-4 plant deposition in the Late Miocene. A large shift the delta C-13(TOC) in the K-K basin is consistent with a change from C-3 to C-4 dominated plants during the middle Miocene. We observe a close relationship between TOC content and gas hydrate saturation, but consider the role of sedimentation rates on the preservation of TOC in the zone of methanogenesis and advective flow of methane from depth. Although TOC contents are sufficient for in situ methanogenesis at all the sites where gas hydrates were observed or inferred from proxy data, seismic, borehole log, pressure core, and gas composition data coupled with relatively high observed gas hydrate saturations suggest that advective gas transport may also play a role in the saturation of methane and the formation of gas hydrates in these regions. Although TOC content may be a first order indicator for gas hydrate potential, the structural and stratigraphic geologic environment along a margin will most likely dictate where the greatest gas hydrate saturations will occur.
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  • 72
    Publication Date: 2015-03-20
    Description: Though primarily driven by insolation changes associated with well-known variations in Earth's astronomical parameters, the response of the climate system during interglacials includes a diversity of feedbacks involving the atmosphere, ocean, sea ice, vegetation and land ice. A thorough multi-model-data comparison is essential to assess the ability of climate models to resolve interglacial temperature trends and to help in understanding the recorded climatic signal and the underlying climate dynamics. We present the first multi-model-data comparison of transient millennial-scale temperature changes through two intervals of the Present Interglacial (PIG; 8-1.2 ka) and the Last Interglacial (LIG; 123-116.2 ka) periods. We include temperature trends simulated by 9 different climate models, alkenone-based temperature reconstructions from 117 globally distributed locations (about 45% of them within the LIG) and 12 ice-core-based temperature trends from Greenland and Antarctica (50% of them within the LIG). The definitions of these specific interglacial intervals enable a consistent inter-comparison of the two intervals because both are characterised by minor changes in atmospheric greenhouse gas concentrations and more importantly by insolation trends that show clear similarities. Our analysis shows that in general the reconstructed PIG and LIG Northern Hemisphere mid-to-high latitude cooling compares well with multi-model, mean-temperature trends for the warmest months and that these cooling trends reflect a linear response to the warmest-month insolation decrease over the interglacial intervals. The most notable exception is the strong LIG cooling trend reconstructed from Greenland ice cores that is not simulated by any of the models. A striking model-data mismatch is found for both the PIG and the LIG over large parts of the mid-to-high latitudes of the Southern Hemisphere where the data depicts negative temperature trends that are not in agreement with near zero trends in the simulations. In this area, the positive local summer insolation trend is counteracted in climate models by an enhancement of the Southern Ocean summer sea-ice cover and/or an increase in Southern Ocean upwelling. If the general picture emerging from reconstructions is realistic, then the model-data mismatch in mid and high Southern Hemisphere latitudes implies that none of the models is able to resolve the correct balance of these feedbacks, or, alternatively, that interglacial Southern Hemisphere temperature trends are driven by mechanisms which are not included in the transient simulations, such as changes in the Antarctic ice sheet or meltwater-induced changes in the overturning circulation
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  • 73
    Publication Date: 2015-09-22
    Description: We show that the Li/Mg systematics of a large suite of aragonitic coral skeletons, representing a wide range of species inhabiting disparate environments, provides a robust proxy for ambient seawater temperature. The corals encompass both zooxanthellate and azooxanthellate species (Acropora sp., Porites sp., Cladocora caespitosa, Lophelia pertusa, Madrepora oculata and Flabellum impensum) collected from shallow, intermediate, and deep-water habitats, as well as specimens cultured in tanks under temperature-controlled conditions. The Li/Mg ratios observed in corals from these diverse tropical, temperate, and deep-water environments are shown to be highly correlated with temperature, giving an exponential temperature relationship of: Li/Mg (mmol/mol) = 5.41 exp (−0.049 * T) (r2 = 0.975, n = 49). Based on the standard error of the Li/Mg versus temperature correlation, we obtain a typical precision of ±0.9 °C for the wide range of species analysed, similar or better than that of other less robust coral temperature proxies such as Sr/Ca ratios. The robustness and species independent character of the Li/Mg temperature proxy is shown to be the result of the normalization of Li to Mg, effectively eliminating the precipitation efficiency component such that temperature remains as the main controller of coral Li/Mg compositions. This is inferred from analysis of corresponding Li/Ca and Mg/Ca ratios with both ratios showing strong microstructure-related co-variations between the fibrous aragonite and centres of calcification, a characteristic that we attribute to varying physiological controls on growth rate. Furthermore, Li/Ca ratios show an offset between more rapidly growing zooxanthellate and azooxanthellate corals, and hence only an approximately inverse relationship to seawater temperature. Mg/Ca ratios show very strong physiological controls on growth rate but no significant dependence with temperature, except possibly for Acropora sp. and Porites sp. A strong positive correlation is nevertheless found between Li/Ca and Mg/Ca ratios at similar temperatures, indicating that both Li and Mg are subject to control by similar growth mechanisms, specifically the mass fraction of aragonite precipitated during calcification, which is shown to be consistent with a Rayleigh-based elemental fractionation model. The highly coherent array defined by Li/Mg versus temperature is thus largely independent of coral calcification mechanisms, with the strong temperature dependence reflecting the greater sensitivity of the KdLi/Ca partition coefficient relative to KdMg/Ca. Accordingly, Li/Mg ratios exhibit a highly coherent exponential correlation with temperature, thereby providing a more robust tool for reconstructing paleo-seawater temperatures.
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  • 74
    Publication Date: 2016-01-11
    Description: A key challenge in oceanography is to capture and quantify processes that happen on short time scales, seasonal changes and inter-annual variations. To address this problem the P&O European Ferries Ltd. Ship MV Pride of Bilbao was fitted with a FerryBox from 2002 to 2010 and data returned to NOC in real time providing near continuous measurements between UK (Portsmouth) and Spain (Bilbao) of temperature, salinity, chlorophyll-fluorescence and oxygen. Additional monthly samples were collected on manned crossings. Over 6000 samples were analysed for nitrate (nitrate and nitrite) concentrations. The timing of nitrate concentration increases (with winter mixing) and decreases (with the spring bloom) are different on and off shelf and in autumn nitrate concentrations remain high on the shelf. Off shelf in the Bay of Biscay, the mixed layer depth assessed using Argo floats, was found to vary from 212 m in relatively mild winters (such as 2007/2008) to 476 m in cold winters (2009/2010). Years with deeper mixing were associated with an increase in nitrate concentrations in the surface waters (~3 μmol l−1) and the increased vertical nutrient supply resulted in higher productivity the following spring. Bloom progression could be seen through the increase in oxygen anomaly and decrease in nitrate concentrations off shelf prior to changes further north on the shelf and phytoplankton growth was initiated as shoaling begins. The full dataset demonstrates that ships of opportunity, particularly ferries with consistently repeated routes, can deliver high quality in situ measurements over large time and space scales that currently cannot be delivered in any other way.
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  • 75
    Publication Date: 2019-09-23
    Description: Highlights • Climate progression in the Balearic basin is examined between 140 and 100 ka. • A number of MIS 5e intra-interglacial cooling events is recognized. • MIS 5e climate phasing in the Western Mediterranean resembles the one in the Nordic Seas. • Foraminiferal abundances are strongly tied to a water circulation regime. • The timing of ORL deposition during MIS 5e resembles that of during the Holocene. Abstract A multiproxy analysis based on planktic foraminiferal abundances, derived SSTs, and stable planktic isotopes measurements together with alkenone abundances and Uk′37 SSTs was performed on late MIS 6 to early MIS 5d sediment recovered from Site 975 (ODP Leg 161) in the South Balearic Islands Basin (Western Mediterranean) with emphasis on reconstructing the climate progression of the last interglacial period. A number of abrupt climate changes related to alternative influence of nutrient rich northern and oligotrophic southern water masses was revealed. Heinrich event 11 and cooling events C27, C26, C25, C24, and C23, which have been previously described in the North Atlantic, were recognized. However, in comparison to the eastern North Atlantic mid-latitude region, events C27 and C26 at Site 975 seem to be significantly more pronounced. Together with evidence of a two-phase climate optimum with maximum SSTs reached during its later phase, this implies a close similarity in climate dynamics between the Western Mediterranean and the Nordic seas. We propose that postglacial effects in the Nordic seas had an influence on the western Mediterranean climate via atmospheric circulation and that these effects competed with the insolation force.
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  • 76
    Publication Date: 2015-07-02
    Description: Marine sponge-associated actinomycetes represent an exciting new resource for the identification of new and novel natural products . Previously, we have reported the isolation and structural elucidation of actinosporins A (1) and B (2) from Actinokineospora sp. strain EG49 isolated from the marine sponge Spheciospongia vagabunda. Herein, by employing different fermentation conditions on the same microorganism, we report on the isolation and antioxidant activity of structurally related metabolites, actinosporins C (3) and D (4). The antioxidant potential of actinosporins C and D was demonstrated using the ferric reducing antioxidant power (FRAP) assay. Additionally, at 1.25 μM, actinosporins C and D showed a significant antioxidant and protective capacity from the genomic damage induced by hydrogen peroxide in the human promyelocytic (HL-60) cell line.
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  • 77
    Publication Date: 2015-07-02
    Description: Microluside A [4 (19-para-hydroxy benzoyloxy-O-β-d-cellobiosyl), 5 (30-para-hydroxy benzoyloxy-O-β-d-glucopyranosyl) xanthone (1)] is a unique O-glycosylated disubstituted xanthone isolated from the broth culture of Micrococcus sp. EG45 cultivated from the Red Sea sponge Spheciospongia vagabunda. The structure of microluside A was determined by 1D- and 2D-NMR techniques as well as high resolution tandem mass spectrometry. The antimicrobial activity evaluation showed that 1 exhibited antibacterial potential against Enterococcus faecalis JH212 and Staphylococcus aureus NCTC 8325 with MIC values of 10 and 13 μM, respectively.
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  • 78
    Publication Date: 2015-10-13
    Description: Highlights • Seismic imaging of gas hydrate deposits in the Mahanadi Basin shows strong linkages to channel/levee structures. • Gas hydrate occurs only in discrete layers, stratigraphically bound. • Gas hydrate saturation was determined successfully from log and core data. • Saturation estimates show overall low values of up to 10% in discrete layers. Abstract Gas hydrate was recovered in the Mahanadi Basin along the eastern continental margin of India during the India National Gas Hydrate Program (NGHP) Expedition-01 in 2006. Infrared imaging of recovered core confirmed gas hydrate occurs predominantly in discrete layers. Pore-water chemistry, electrical resistivity and acoustic velocity down-hole logs were used to estimate gas hydrate saturations at three of the sites in the Mahanadi Basin: Sites NGHP-01-08, -09, and -19. Gas hydrate saturation estimated from pore-water chloride concentrations shows values up to ∼10% of the pore space at ∼200 m below seafloor just above the base of the gas hydrate stability zone (BGHSZ). Gas hydrate saturations estimated from electrical resistivity and acoustic velocity logs using standard relations and modeling approaches are comparable to each other and saturations are ∼10–15% of the pore space. Seismic reflection data were also analyzed for the evidence of gas hydrate, and a bottom-simulating reflector (BSR) was imaged along the seismic profiles in the study area. The depth of the BSR is varying from ∼200 m to ∼300 m below seafloor depending on water depth in the Mahanadi Basin. The occurrence of gas hydrate was observed to be associated with deep-water channel and levee complexes (especially at Site NGHP-01-19) based on the regional seismic data. But the cored/logged section at each site lacked any significant sand fraction, which does not allow for higher gas hydrate saturations. As identified from seismic time-slice data, all sites drilled in the Mahanadi Basin are within the steeper slope region of the channel system and any sand bypassed this region. Significant sand deposition would occur further down slope where typical fan-type deposits can be inferred from the seismic data and thus higher accumulations of gas hydrate would be expected.
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  • 79
    Publication Date: 2015-10-13
    Description: Highlights • Regional difference in Vp and Vs are related to grain-size distribution. • New algorithm to derive gas hydrate concentration from Vp and Vs is introduced. • Sediments from northern Cascadia are similar to Arctic gas hydrate settings. • New empirical relationships for shear-wave velocities are defined. Abstract Shear wave velocity data have been acquired at several marine gas hydrate drilling expeditions, including the India National Gas Hydrate Program Expedition 1 (NGHP-01), the Ocean Drilling Program (ODP) Leg 204, and Integrated Ocean Drilling Program (IODP) Expedition 311 (X311). In this study we use data from these marine drilling expeditions to develop an understanding of general grain-size control on the P- and S-wave properties of sediments. A clear difference in the downhole trends of P-wave (Vp) and S-wave (Vs) velocity and the Vp/Vs ratio from all three marine regions was observed: the northern Cascadia margin (IODP X311) shows the highest P-wave and S-wave velocity values overall and those from the India margin (Expedition NGHP-01) are the lowest. The southern Cascadia margin (ODP Leg 204) appears to have similar low P-wave and S-wave velocity values as seen off India. S-wave velocity values increase relative to the sites off India, but they are not as high as those seen on the northern Cascadia margin. Such regional differences can be explained by the amount of silt/sand (or lack thereof) occurring at these sites, with northern Cascadia being the region of the highest silt/sand occurrences. This grain-size control on P-wave and S-wave velocity and associated mineral composition differences is amplified when compared to the Arctic permafrost environments, where gas hydrate predominantly occurs in sand- and silt-dominated formations. Using a cross-plot of gamma ray values versus the Vp/Vs ratio, we compare the marine gas hydrate occurrences in these regions: offshore eastern India margin, offshore Cascadia margin, the Ignik-Sikumi site in Alaska, and the Mallik 5L-38 site in the Mackenzie Delta. The log-data from the Arctic permafrost regions show a strongly linear Vp–Vs relationship, similar to the previously defined empirical relationships by Greenberg and Castagna (1992). P- and S-wave velocity data from the India margin and ODP Leg 204 deviate strongly from these linear trends, whereas data from IODP X311 plot closer to the trend of the Arctic data sets and previously published relationships. Three new linear relationships for different grain size marine sediment hosts are suggested: a) mud-dominated (Mahanadi Basin, ODP Leg 204 & NGHP-01-17): Vs = 1.5854 × Vp − 2.1649 b) silty-mud (KG Basin): Vs = 0.8105 × Vp − 1.0223 c) silty-sand (IODP X311): Vs = 0.5316 × Vp − 0.4916 We investigate the relationship of gas hydrate saturation determined from electrical resistivity on the Vp/Vs ratio and found that the sand-dominated Arctic hosts show a clearly decreasing trend of Vp/Vs ratio with gas hydrate saturation. Though limited due to lower overall GH saturations, a similar trend is seen for sites from IODP X311 and at the ash-dominated NGHP-01-17 sediment in the Andaman Sea. Gas hydrate that occurs predominantly in fractured clay hosts show a different trend where the Vp/Vs ratio is much higher than at sand-dominated sites and remains constant or increases slightly with increasing gas hydrate saturation. This trend may be the result of anisotropy in fracture-dominated systems, where P- and S-wave velocities appear higher and Archie-based saturations of gas hydrate are overestimated. Gas hydrate concentrations were also estimated in these three marine settings and at Arctic sites using an effective medium model, combining P- and S-wave velocities as equally weighted constraints on the calculation. The effective medium approach generally overestimates S-wave velocity in high-porosity, clay-dominated sediments, but can be accurately used in sand-rich formations.
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  • 80
    Publication Date: 2020-10-21
    Description: Highlights: • The central uplift of the Manicouagan impact structure has been dated by (U–Th)/He • A (U–Th)/He central age (207.1 ± 6.4 Ma, 2 standard error, n = 40) has been determined • This age reflects the rapid uplift, cooling and closure of He in ~ 1 Gyr-old titanites • This correlates with the previously determined U–Pb impact-melt age of 214 ± 1 Ma • Our new approach enables dating complex impact structures that lack impact melt rocks Abstract Forty titanite grain fragments from 9 central uplift samples of metamorphosed anorthosite from the Manicouagan impact structure were dated by the (U–Th)/He technique. A (U–Th)/He central age of 207.1 ± 6.4 Ma (2 standard error (SE), n = 40) has been determined. With 4 outlier ages removed the central age is refined to 208.9 ± 5.1 Ma (2 SE). Both of these ages are within error of the previously determined U–Pb zircon age of 214 ± 1 Ma (2σ) derived from the impact melt. Manicouagan's central uplift formed due to rapid elevation from ~ 7–10 km depth as part of the modification stage of the impact process, which has facilitated the dating of its emplacement due to resulting rapid exhumation and cooling and closure of the (U–Th)/He system in titanite. Correlation with the previous U–Pb zircon 214 ± 1 Ma impact melt crystallization age indicates that the (U–Th)/He titanite dating technique offers a new approach to dating complex impact structures in the absence of viable melt sheets, or other melt products. The youngest ca. 195 Ma (U–Th)/He dates preserved in some titanite fragments are synchronous with Early Jurassic, rift-induced lithospheric thinning and associated igneous activity that defines the Central Atlantic Magmatic Province (CAMP). The (U–Th)/He titanite data from Manicouagan indicate that the influence of this regional event may extend west of the previously proposed limit of CAMP activity.
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  • 81
    Publication Date: 2016-01-11
    Description: Gas hydrate resource assessments that indicate enormous global volumes of gas present within hydrate accumulations have been one of the primary driving forces behind the growing interest in gas hydrates. Gas hydrate volumetric estimates in recent years have focused on documenting the geologic parameters in the “gas hydrate petroleum system” that control the occurrence of gas hydrates in nature. The primary goals of this report are to review our present understanding of the geologic controls on the occurrence of gas hydrate in the offshore of India and to document the application of the petroleum system approach to the study of gas hydrates. National Gas Hydrate Program of India executed the National Gas Hydrate Program Expedition 01 (NGHP-01) in 2006 in four areas located on the eastern and western margins of the Indian Peninsula and in the Andaman Sea. These areas have experienced very different tectonic and depositional histories. The peninsular margins are passive continental margins resulting from a series of rifting episodes during the breakup and dispersion of Gondwanaland to form the present Indian Ocean. The Andaman Sea is bounded on its western side by a convergent margin where the Indian plate lithosphere is being subducted beneath southeast Asia. NGHP-01 drilled, logged, and/or cored 15 sites (31 holes) in the Krishna–Godavari Basin, 4 sites (5 holes) in the Mahanadi Basin, 1 site (2 holes) in the Andaman Sea, and 1 site (1 hole) in the Kerala–Konkan Basin. Holes were drilled using standard drilling methods for the purpose of logging-while-drilling and dedicated wireline logging; as well as through the use of a variety of standard coring systems and specialized pressure coring systems. NGHP-01 yielded evidence of gas hydrate from downhole log and core data obtained from all the sites in the Krishna–Godavari Basin, the Mahanadi Basin, and in the Andaman Sea. The site drilled in the Kerala–Konkan Basin during NGHP-01 did not yield any evidence of gas hydrate. Most of the downhole log-inferred gas hydrate and core-recovered gas hydrate were characterized as either fracture-filling in clay-dominated sediments or as pore-filling or grain-displacement particles disseminated in both fine- and coarse-grained sediments. Geochemical analyses of gases obtained from sediment cores recovered during NGHP-01 indicated that the gas in most all of the hydrates in the offshore of India is derived from microbial sources; only one site in the Andaman Sea exhibited limited evidence of a thermogenic gas source. The gas hydrate petroleum system concept has been used to effectively characterize the geologic controls on the occurrence of gas hydrates in the offshore of India.
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  • 82
    Publication Date: 2016-01-04
    Description: The Indian National Gas Hydrate Program Expedition 01 (NGHP-01) is designed to study the occurrence of gas hydrate along the passive continental margin of the Indian Peninsula and in the Andaman convergent margin, with special emphasis on understanding the geologic and geochemical controls on the occurrence of gas hydrate in these two diverse settings. The NGHP-01 expedition established the presence of gas hydrates in the Krishna–Godavari and Mahanadi Basins, and the Andaman Sea. The expedition discovered in the Krishna–Godavari Basin one of the thickest gas hydrate accumulations ever documented, in the Andaman Sea one of the thickest and deepest gas hydrate stability zones in the world, and established the existence of a fully developed gas hydrate petroleum system in all three basins. The primary goal of NGHP-01 was to conduct scientific ocean drilling/coring, logging, and analytical activities to assess the geologic occurrence, regional context, and characteristics of gas hydrate deposits along the continental margins of India. This was done in order to meet the long-term goal of exploiting gas hydrate as a potential energy resource in a cost effective and safe manner. During its 113.5-day voyage, the D/V JOIDES Resolution cored and/or drilled 39 holes at 21 sites (1 site in Kerala–Konkan, 15 sites in Krishna–Godavari, 4 sites in Mahanadi, and 1 site in the Andaman deep offshore area), penetrated more than 9250 m of sedimentary section, and recovered nearly 2850 m of core. Twelve holes were logged with logging-while-drilling (LWD) tools and an additional 13 holes were wireline logged. The science team utilized extensive on-board laboratory facilities to examine and prepare preliminary reports on the physical properties, geochemistry, and sedimentology of all the data collected prior to the end of the expedition. Samples were also analyzed in additional post-expedition shore-based studies conducted in leading laboratories around the world. One of the specific objectives of this expedition was to test gas hydrate formation models and constrain model parameters, especially those that account for the formation of concentrated gas hydrate accumulations. The necessary data for characterizing the occurrence of in situ gas hydrate, such as interstitial water chlorinities, core-derived gas chemistry, physical and sedimentological properties, thermal images of the recovered cores, and downhole measured logging data (LWD and/or conventional wireline log data), were obtained from most of the drill sites established during NGHP-01. Almost all of the drill sites yielded evidence for the occurrence of gas hydrate; however, the inferred in situ concentration of gas hydrate varied substantially from site to site. For the most part, the interpretation of downhole logging data, core thermal images, interstitial water analyses, and pressure core images from the sites drilled during NGHP-01 indicate that the occurrence of concentrated gas hydrate is mostly associated with the presence of fractures in the sediments, and in some limited cases, by coarser grained (mostly sand-rich) sediments.
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  • 83
    Publication Date: 2015-03-12
    Description: The Fram Strait is the main gateway for water, heat and sea-ice exchanges between the Arctic Ocean and the North Atlantic. The complex physical environment results in a highly variable primary production in space and time. Previous regional studies have defined key bottom-up (ice cover and stratification from melt water controlling the light availability, and wind mixing and water transport affecting the supply of nutrients) and top-down processes (heterotrophic grazing). In this study, in situ field data, remote sensing and modeling techniques were combined to investigate in detail the influence of melting sea-ice and ocean properties on the development of phytoplankton blooms in the Fram Strait region for the years 1998–2009. Satellite-retrieved chlorophyll-a concentrations from temporarily ice-free zones were validated with contextual field data. These were then integrated per month on a grid size of 20 × 20 km, resulting in 10 grids/fields. Factors tested for their influence on spatial and temporal variation of chlorophyll-a were: sea-ice concentration from satellite and sea-ice thickness, ocean stratification, water temperature and salinity time-series simulated by the ice-ocean model NAOSIM. The time series analysis for those ten ice-free fields showed a regional separation according to different physical processes affecting phytoplankton distribution. At the marginal ice zone the melting sea-ice was promoting phytoplankton growth by stratifying the water column and potentially seeding phytoplankton communities. In this zone, the highest mean chlorophyll concentration averaged for the productive season (April–August) of 0.8 mgC/m3 was observed. In the open ocean the phytoplankton variability was correlated highest to stratification formed by solar heating of the upper ocean layers. Coastal zone around Svalbard showed processes associated with the presence of coastal ice were rather suppressing than promoting the phytoplankton growth. During the twelve years of observations, chlorophyll concentrations significantly increased in the southern part of the Fram Strait, associated with an increase in sea surface temperature and a decrease in Svalbard coastal ice. Highlights • We used combination of satellite, simulated and in situ data for 1998–2009. • Stratification from sea-ice melt resulted in largest CHL at the marginal ice zone. • Stratification caused by solar warming promoted open ocean blooms. • Late retreat of Svalbard shelf ice delayed coastal blooms.
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  • 84
    facet.materialart.
    Unknown
    Elsevier
    In:  Journal of Asian Earth Sciences, 79 . pp. 358-365.
    Publication Date: 2015-10-13
    Description: Highlights • Gas hydrate reported from the Andaman Sea, India after coring and drilling. • Geothermal modeling of base of gas hydrate stability zone. • Gas hydrate stability thickness map of Andaman Sea. • Gas hydrate saturation using rock physics modeling. • Seismic attributes (i.e. reflection strength and instantaneous frequency etc.). Abstract Wide-spread bottom simulating reflectors (BSRs) are observed along available multichannel seismic profiles covering an area of about 290 km2 in the Andaman Sea. The seismic data shows that the BSR occurs at places where water depth exceeds 1000 m, and is identified by cross-cutting relationships with the dipping reflectors. The BSR that represents the base of gas hydrate stability field can be used to infer the gas hydrate stability thickness, which ranges between ∼518 m to ∼861 m depending on water depths. In situ measurement at site 17 during the Indian National Gas Hydrate Program (NGHP) Expedition-01 shows very low geothermal gradient 19 ± 2 °C/km. A conductive model was used to determine geothermal gradients from BSRs, which is calculated and varying between 10 °C/km to 40 °C/km. The low geothermal gradient is responsible for the deepest BSR or gas hydrate stability zone (GHSZ) in the Andaman region and in the world. The geothermal modeling shows a close match of the predicted base of the gas hydrate stability zone with the observed BSR depths.
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  • 85
    Publication Date: 2015-07-03
    Description: Monitoring of the water column in the vicinity of offshore Carbon Capture and Storage (CCS) sites is needed to ensure site integrity and to protect the surrounding marine ecosystem. In this regard, the use of continuous, autonomous systems is considered greatly advantageous due to the costs and limitations of periodic, ship-based sampling campaigns. While various geochemical monitoring tools have been developed their elevated costs and complexities mean that typically only one unit can be deployed at a time, yielding single point temporal data but no spatial data. To address this the authors have developed low-cost pCO2 sensors (GasPro-pCO2) that are small, robust, stable, and which have a low power consumption, characteristics which allow for the deployment of numerous units to monitor the spatial-temporal distribution of pCO2, temperature, and water pressure in surface water environments. The present article details the results of three field deployments at the natural, CO2-leaking site near Panarea, Island. While the first consisted of 6 probes placed on the sea floor for a 2.5 month period, the other two involved the deployment of 20 GasPro units along a transect through the water column in the vicinity of active CO2 seeps over 2 – 4 days. Results show both transport and mixing processes and highlight the dynamic nature of the leakage-induced marine geochemical anomalies. Implications for monitoring programs as well as potential impacts are discussed.
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  • 86
    Publication Date: 2015-07-03
    Description: Although CO2 capture and storage in deep, offshore reservoirs is a proven technology, as illustrated by over 15 years of operation of the Sleipner site in the Norwegian North Sea, potential leakage from such sites into the overlying water column remains a concern for some stakeholders. Therefore, we are obliged to carefully assess our ability to predict and monitor the migration, fate, and potential ecosystem impact of any leaked CO2. The release of bubbles from the sea floor, their upward movement, and their dissolution into the surrounding water controls the initial boundary conditions, and thus an understanding of the behavior of CO2 bubbles is critical to address such issues related to monitoring and risk assessment. The present study describes results from an in situ experiment conducted in 12 m deep marine water near the extinct volcanic island of Panarea (Italy). Bubbles of a controlled size were created using natural CO2 released from the sea floor, and their evolution during ascent in the water column was monitored via both video and chemical measurements. The obtained results were modelled and a good fit was obtained, showing the potential of the model as a predictive tool. These preliminary results and an assessment of the difficulties encountered are examined and will be used to improve experimental design for the subsequent phase of this research.
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  • 87
    facet.materialart.
    Unknown
    Wiley-Blackwell
    In:  Journal of Quaternary Science, 29 (7). pp. 627-640.
    Publication Date: 2015-09-01
    Description: Laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS) is used widely to analyse single volcanic glass shards from Quaternary tephra deposits for stratigraphic correlation. As yet, no generally accepted protocol for these analyses exists and published methods report significant differences in crater size and calibration strategies. Using Ca as the ‘internal standard’ (CaI.S.), and not SiI.S., for the analysis of rhyolitic glass can cause significant problems, because of ablation of (i) Ca-rich phenocrysts, notably ‘ubiquitous’ plagioclase, but also calcic-amphibole, apatite and allanite or (ii) mounting epoxy resin which can contribute to the Ca internal standard signal. Using CaI.S. can cause underreporting of many elements which concentrate in Ca-rich phenocrysts, making their ablation difficult to recognize, but when using SiI.S., no such underreporting occurs. Additionally, larger ablation craters (50mm diameter) potentially incorporate even small volumes of phenocryst material, whereas smaller craters (〈20mm diameter) more frequently miss phenocrysts. Thus, for the LA-ICP-MS analysis of rhyolitic glass shards, smaller ablation craters should be employed and calibrated using SiI.S., allowing recognition and removal of analyses incorporating Ca-rich phenocrysts and avoiding issues related to the ablation of the mounting resin.
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  • 88
    Publication Date: 2015-07-24
    Description: Highlights • The complex geodynamic structure of the area is reflected in the wide range of compositions of the emitted fluids. • High salinity waters with hydrocarbon gases and a purely crustal He component were collected from deep wells. • Hyperalkaline waters with CH4- and H2-dominated gases are found in the ophiolite complex. • Shallow meteoric groundwaters in the southern part of the basin show a prevailing atmospheric component for dissolved gases. • A significant mantle component (He and C) is found in the dissolved gases of the northeastern sites. Abstract We investigated the geochemical features of the fluids circulating over the Amik Basin (SE Turkey–Syria border), which is crossed by the Northern extension of the DSF (Dead Sea Fault) and represents the boundary area of three tectonic plates (Anatolian, Arabian and African plates). We collected 34 water samples (thermal and cold from natural springs and boreholes) as well as 8 gas samples (bubbling and gas seepage) besides the gases dissolved in the sampled waters. The results show that the dissolved gas phase is a mixture of shallow (atmospheric) and deep components either of mantle and crustal origin. Coherently the sampled waters are variable mixtures of shallow and deep ground waters, the latter being characterised by higher salinity and longer residence times. The deep groundwaters (from boreholes deeper than 1000 m) have a CH4-dominated dissolved gas phase related to the presence of hydrocarbon reservoirs. The very unique tectonic setting of the area includes the presence of an ophiolitic block outcropping in the westernmost area on the African Plate, as well as basalts located to the North and East on the Arabic Plate. The diffuse presence of CO2-enriched gases, although diluted by the huge groundwater circulation, testifies a regional degassing activity. Fluids circulating over the ophiolitic block are marked by H2-dominated gases with abiogenic methane and high-pH waters. The measured 3He/4He isotopic ratios display contributions from both crustal and mantle-derived sources over both sides of the DSF. Although the serpentinization process is generally independent from mantle-type contribution, the recorded helium isotopic ratios highlight variable contents of mantle-derived fluids. Due to the absence of recent volcanism over the western side of the basin (African Plate), we argue that CO2-rich volatiles carrying mantle-type helium and enriched in heavy carbon, are degassed by deep-rooted regional faults rather than from volcanic sources.
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  • 89
    Publication Date: 2015-09-24
    Description: Highlights: • Cold-water coral mound formation is mainly influenced by the baffling of fine grained material within a coral framework. • Mass wasting appears to be an important mound progradation process. • Even heavily reworked sediments contain valuable information on the original mound aggradation processes. Abstract: An unconformity-bound glacial sequence (135 cm thick) of a coral-bearing sediment core collected from the flank of a cold-water coral mound in the Banda Mound Province off Mauritania was analysed. In order to study the relation between coral framework growth and its filling by hemipelagic sediments, U-series dates obtained from the cold-water coral species Lophelia pertusa were compared to 14C dates of planktonic foraminifera of the surrounding matrix sediments. The coral ages, ranging from 45.1 to 32.3 ka BP, exhibit no clear depositional trend, while on the other hand the 14C dates of the matrix sediment provide ages within a much narrower time window of 〈3000 yrs (34.6–31.8 cal ka BP), corresponding to the latest phase of the coral growth period. In addition, high-resolution computer tomography data revealed a subdivision of the investigated sediment package into three distinct parts, defined by the portion and fragmentation of corals and associated macrofauna as well as in the density of the matrix sediments. Grain size spectra obtained on the matrix sediments show a homogeneous pattern throughout the core sediment package, with minor variations. These features are interpreted as indicators of redeposition. Based on the observed structures and the dating results, the sediments were interpreted as deposits of a mass wasting event, namely a debris flow. During this event, the sediment unit must have been entirely mixed; resulting in averaging of the foraminifera ages from the whole unit and giving randomly distributed coral ages. In this context, for the first time mass wasting is proposed to be a substantial process of mound progradation by exporting material from the mound top to the flanks. Hence, it may not only be an erosional feature but also widening the base of the mound, thus allowing further vertical mound growth.
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  • 90
    Publication Date: 2017-08-22
    Description: Highlights: • Development/evaluation of a ‘needle trap device’ (NTD) method for the analysis of VOC in seawater. • First field application of the NTD method in a Norwegian Fjord during a CO2 enrichment study. • Identification and quantification of DMS, isoprene and α-pinene under various pCO2 levels. • In field NTD GC-MS and P&T GC-FPD method comparison for the DMS datasets (r2 = 0.8). Abstract: A novel analytical method using newly developed needle trap devices (NTDs) and a gas chromatograph–mass spectrometer (GC–MS) system was developed. It has been applied for the first time on seawater samples to quantify marine volatile organic compounds (VOCs) relevant to atmospheric chemistry and climate. By purging gases from small water volumes (10 ml) onto sealable NTDs and then desorbing them thermally within the GC injection port, an effective analysis of a wide range of VOCs (isoprene to α-pinene) was achieved within 23 min. Good repeatability (RSDs 〈 16 %), linearity (r2 = 0.96–0.99) and limits of detection in the range of pM were obtained for all examined compounds. Following laboratory validation, the NTD method was applied in a mesocosm field study in a Norwegian Fjord. Nine individual mesocosm ecosystems under different CO2 regimes were examined. Dimethyl sulfide (DMS), isoprene and monoterpenes were identified and quantified in mesocosm seawater. The DMS measurements are compared with parallel measurements provided by an independent P&T GC–FPD system showing good correlation, r2 = 0.8. Our study indicates that the NTD method can be used successfully in place of the traditionally used extraction techniques (P&T, SPME) in marine environments to extend the suite of species typically measured and improve detection limits.
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  • 91
    Publication Date: 2016-05-24
    Description: Kalsilite-bearing igneous rocks are extremely rare,most known examples are volcanic. The few previously recorded kalsilite-bearing plutonic rocks are all Phanerozoic and mostly limited to the small ultrapotassic massifs of the Baikal–Stanovoi Rift in the Siberian Craton, the Greenland Batbjerg Massif, and the Kola Peninsula Khibiny Complex. We have found that the Archean to Proterozoic transition in thewestern Reguibat Rise of theWest African Craton is marked by several small massifs predominantly composed of kalsilite syenites, i.e., synnyrites. The largest massif is Awsard, a deep-seated intrusive body mainly composed of 2.46 Ga synnyrites and K-rich nepheline syenites with mantle-like Sr and Nd (whole-rock) and O (zircon) isotope composition. Apart from some superficial resemblance to the Baikal–Stanovoi synnyritiferous complexes, Awsard has no known equivalent in the geological record. It is the oldest, the deepest and the largest known occurrence of synnyrites. Awsard comprises solely felsic syenites with εNd(t) notably more primitive than their Siberian counterparts. The synnyrites contain kalsilite and rare nepheline as primary phases with no leucite or leucite pseudomorphs. Kalsilite and nepheline form large discrete grains that, in places, are accompanied by spectacular Ks–Or or Ne–Or symplectites. The symplectites are magmatic, generated by simultaneous crystallization of the two phases and the imbalance between the growth rate of the feldspar and the diffusivity of silica and alkalis in the melt. To explain why Awsard lacks mafic rocks and associated carbonatites, typical of other synnyrite massifs, we propose that ascending water-poor (H2O b 0.65 wt.%) mafic ultrapotassic magmas solidified at a pressure of 10–16 kbar underneath the already stabilized Archean crust of the region. In these conditions leucite began to crystallize when the temperature dropped to around 1100 °C. As a result of their low density, leucite crystals floated and formed a cap at the top of the intrusion. Then, the chamber was replenished with awater-rich andmore sodic ultrapotassicmagma that originated in the samemetasomatized mantle-source region. After prolonged fractional crystallization this second magma released an aqueous vapor phase that migrated upwards and melted the leucite cap thus producing a low-density hydrous magma of leucite-like, synnyritic, composition. This leucite-like magma, and the late residual melts from the second pulse that replenished the chamber, ascended and intruded the already cratonized lower crust of the western Reguibat Rise. There, the magmas crystallized outside the leucite stability field to produce the synnyrites and the nepheline syenites, respectively. There is no evidence that the metasomatic refertilization of the mantle required to produce the initial ultrapotassic mafic magmas was related to subduction fluids. On the contrary, it seems to have been caused by incompatible-element enriched hydrous fluids released from delaminated lower crustal fragments.
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  • 92
    facet.materialart.
    Unknown
    Elsevier
    In:  In: Encyclopedia of Meat Sciences. , ed. by Divine, C. and Dikeman, M. Elsevier, Amsterdam, The Netherlands, pp. 395-404. 2.ed. ISBN 978-0-12-384734-8
    Publication Date: 2016-06-27
    Description: Yeasts and molds are important microorganisms related to human welfare, safety, and food resources. They contribute greatly to the food industry in areas such as winemaking, single-cell protein production, brewing, baking, vitamin production, etc. However, under certain conditions they can act as potential spoilage organisms in food, especially in processed, preserved, and refrigerated food. Enumeration and identification of yeasts and molds from foods are of great importance in understanding the value of these organisms in various food systems as well as their role in spoilage. Knowledge of how certain yeasts and molds colonize meat products and of their effects on the meat products is essential in order to prevent economic losses during spoilage or to maximize desirable fermentation of certain cured meat products by yeasts and molds. Occasionally, some pathogenic yeasts and molds might occur in meat and meat products that may pose food safety issues.
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  • 93
    Publication Date: 2016-09-28
    Description: Due to their outstanding resolution and well-constrained chronologies, Greenland ice-core records provide a master record of past climatic changes throughout the Last InterglacialeGlacial cycle in the North Atlantic region. As part of the INTIMATE (INTegration of Ice-core, MArine and TErrestrial records) project, protocols have been proposed to ensure consistent and robust correlation between different records of past climate. A key element of these protocols has been the formal definition and ordinal numbering of the sequence of Greenland Stadials (GS) and Greenland Interstadials (GI) within the most recent glacial period. The GS and GI periods are the Greenland expressions of the characteristic DansgaardeOeschger events that represent cold and warm phases of the North Atlantic region, respectively. We present here a more detailed and extended GS/GI template for the whole of the Last Glacial period. It is based on a synchronization of the NGRIP, GRIP, and GISP2 ice-core records that allows the parallel analysis of all three records on a common time scale. The boundaries of the GS and GI periods are defined based on a combination of stable-oxygen isotope ratios of the ice (d18O, reflecting mainly local temperature) and calcium ion concentrations (reflecting mainly atmospheric dust loading) measured in the ice. The data not only resolve the well-known sequence of DansgaardeOeschger events that were first defined and numbered in the ice-core records more than two decades ago, but also better resolve a number of short-lived climatic oscillations, some defined here for the first time. Using this revised scheme, we propose a consistent approach for discriminating and naming all the significant abrupt climatic events of the Last Glacial period that are represented in the Greenland ice records. The final product constitutes an extended and better resolved Greenland stratotype sequence, against which other proxy records can be compared and correlated. It also provides a more secure basis for investigating the dynamics and fundamental causes of these climatic perturbations.
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  • 94
    Publication Date: 2016-06-09
    Description: Highlights: • Noelaerhabdaceae mean coccolith weight increases during Termination II. • Coccolith assemblage and the degree of coccolith calcification control mean weight. • Causes for the weight increase are different in sub-arctic and tropical settings. • Terminations I and II show opposite patterns in coccolith weight changes. • Rising CO2 during deglaciations has no uniform effect on coccolith weight. Abstract: Glacial to interglacial environmental changes have a strong impact on coccolithophore assemblage composition. At the same time, glacial terminations are characterised by an increase in atmospheric CO2 concentration. In order to determine how these two processes influence the calcite production of coccolithophores, we compared coccolith weight estimates obtained with the automated coccolith recognition system SYRACO with SEM assemblage counts covering the penultimate glacial Termination (T II) from two sediment cores in the North Atlantic Ocean. At the temperate Rockall Plateau (ODP Site 980), mean coccolith weight peaks around Heinrich event 11. This is paralleled by a shift within the coccolith assemblage related to the changes of the oceanic frontal system during Termination II. In the tropical Florida Strait, far from the influences of frontal zones, mean Noelaerhabdaceae coccolith weight doubles during Termination II. This is partly due to an assemblage shift towards larger and heavier calcifying morphotypes, but mainly an effect of increasing coccolithophore calcification. This increase is exactly mirroring the rise in atmospheric CO2, contradicting previous findings from Termination I. Reconstructions of DIC, alkalinity and calcite saturation at the Florida Strait during Termination II produce higher estimates of these parameters compared to previous studies for which coccolith weight estimates are available, and therefore a change of the carbonate system is the most likely cause for the coccolithophore calcification increase during atmospheric CO2 rise. Our results illustrate that even during rising atmospheric CO2 the conditions of the seawater carbonate system can be favourable for coccolithophore calcification. The total CaCO3 production of a coccolithophore assemblage under increasing CO2 therefore depends on regional seawater carbonate system characteristics and the local assemblage composition.
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  • 95
    Publication Date: 2016-06-14
    Description: Glacial environments may provide an important but poorly constrained source of potentially bioavailable iron and manganese phases to the coastal ocean in high-latitude regions. Little is known about the fate and biogeochemical cycling of glacially derived iron and manganese in the coastal marine realm. Sediment and porewater samples were collected along transects from the fjord mouths to the tidewater glaciers at the fjord heads in Smeerenburgfjorden, Kongsfjorden, and Van Keulenfjorden along Western Svalbard. Solid-phase iron and manganese speciation, determined by sequential chemical extraction, could be linked to the compositions of the local bedrock and hydrological/weathering conditions below the local glaciers. The concentration and sulfur isotope composition of chromium reducible sulfur (CRS) in Kongs- and Van Keulenfjorden sediments largely reflect the delivery rate and isotope composition of detrital pyrite originating from adjacent glaciers. The varying input of reducible iron and manganese oxide phases and the input of organic matter of varying reactivity control the pathways of organic carbon mineralization in the sediments of the three fjords. High reducible iron and manganese oxide concentrations and elevated metal accumulation rates coupled to low input of “fresh” organic matter lead to a strong expression of dissimilatory metal oxide reduction evidenced in very high porewater iron (up to 800 lM) and manganese (up to 210 lM) concentrations in Kongsfjorden and Van Keulenfjorden. Sediment reworking by the benthic macrofauna and physical sediment resuspension via iceberg calving may be additional factors that promote extensive benthic iron and manganese cycling in these fjords. On-going benthic recycling of glacially derived dissolved iron into overlying seawater, where partial reoxidation and deposition occurs, facilitates the transport of iron across the fjords and potentially into adjacent continental shelf waters. Such iron-dominated fjord sediments are likely to provide significant fluxes of potentially bioavailable iron to coastal waters and beyond. By contrast, low delivery of reducible iron (oxyhydr)oxide phases and elevated organic carbon mineralization rates driven by elevated input of “fresh” marine organic matter allow organoclastic sulfate reduction to dominate carbon remineralization at the outer Smeerenburgfjorden sites, which may limit iron fluxes to the water column.
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  • 96
    Publication Date: 2019-09-23
    Description: Highlights: • Geochemical data from high-T leucogranites imply pure crustal melting. • New U–Pb monazite ages constrain intrusion time close to peak metamorphism. • Updated Sr–Nd–Pb isotope data imply metasedimentary sources. Two suites of leucogranites were emplaced at 508 ± 5.9 Ma in the Okombahe District of the Damara belt (Namibia) synchronous with the peak of regional high-temperature metamorphism. The Sr (87Sr/86Srinit: 0.707 to 0.711), Nd (εNdinit: − 4.5 to − 6.6), and Pb isotopic (206Pb/204Pb: 18.51–19.13; 207Pb/204Pb: 15.63–15.69; 208Pb/204Pb: 38.08–38.66) compositions indicate that these peraluminous S-type granites were derived from mid- to lower-crustal rocks, which are slightly different to the metapelitic rocks into which they intruded. Since the leucogranites are unfractionated and show no evidence for assimilation or contamination, they constrain the temperature and pressure conditions of their formation. Calculated Zr and LREE saturation temperatures of ca. 850 °C indicate high-temperature crustal melts. High Rb/Sr and low Sr/Ba ratios are consistent with biotite dehydration melting of pelitic source rocks. Qz–Ab–Or systematics reveal that melting and segregation for the least fractionated samples occurred at ca. 7 kbar corresponding to a mid-crustal level of ca. 26 km. However, there is no evidence for a mantle component that could have served as a local heat source for crustal melting. Therefore, the hot felsic magmas that formed close to the time of peak metamorphism are the result of long-lasting high temperature regional metamorphic conditions and intra-crustal collision.
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  • 97
    Publication Date: 2019-09-23
    Description: Highlights: • Marie Byrd Seamounts (MBS) formed off Antarctica at 65-56 Ma in an extensional regime • MBS originate from HIMU-type mantle attached at the base of the Antarctic lithosphere • Continental insulation flow transferred HIMU mantle into the oceanic mantle New radiometric age and geochemical data of volcanic rocks from the guyot-type Marie Byrd Seamounts (MBS) and the De Gerlache Seamounts and Peter I Island (Amundsen Sea) are presented. 40Ar/39Ar ages of the shield phase of three MBS are Early Cenozoic (65 to 56 Ma) and indicate formation well after creation of the Pacific-Antarctic Ridge. A Pliocene age (3.0 Ma) documents a younger phase of volcanism at one MBS and a Pleistocene age (1.8 Ma) for the submarine base of Peter I Island. Together with published data, the new age data imply that Cenozoic intraplate magmatism occurred at distinct time intervals in spatially confined areas of the Amundsen Sea, excluding an origin through a fixed mantle plume. Peter I Island appears strongly influenced by an EMII type mantle component that may reflect shallow mantle recycling of a continental raft during the final breakup of Gondwana. By contrast the Sr-Nd-Pb-Hf isotopic compositions of the MBS display a strong affinity to a HIMU type mantle source. On a regional scale the isotopic signatures overlap with those from volcanics related to the West Antarctic Rift System, and Cretaceous intraplate volcanics in and off New Zealand. We propose reactivation of the HIMU material, initially accreted to the base of continental lithosphere during the pre-rifting stage of Marie Byrd Land/Zealandia to explain intraplate volcanism in the Amundsen Sea in the absence of a long-lived hotspot. We propose continental insulation flow as the most plausible mechanism to transfer the sub-continental accreted plume material into the shallow oceanic mantle. Crustal extension at the southern boundary of the Bellingshausen Plate from about 74 to 62 Ma may have triggered adiabatic rise of the HIMU material from the base of Marie Byrd Land to form the MBS. The De Gerlache Seamounts are most likely related to a preserved zone of lithospheric weakness underneath the De Gerlache Gravity Anomaly.
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  • 98
    Publication Date: 2017-07-19
    Description: Highlights: • We used indoor mesocosms to test the impact of warming on plankton communities. • Different stages of phytoplankton bloom were analysed. • Increased temperature and zooplankton grazing had similar effects on phytoplankton. • Warming and increased zooplankton density decreased phytoplankton richness. • Warming and increased zooplankton density increased phytoplankton evenness. Recent climate warming is expected to affect phytoplankton biomass and diversity in marine ecosystems. Temperature can act directly on phytoplankton (e.g. rendering physiological processes) or indirectly due to changes in zooplankton grazing activity. We tested experimentally the impact of increased temperature on natural phytoplankton and zooplankton communities using indoor mesocosms and combined the results from different experimental years applying a meta-analytic approach. We divided our analysis into three bloom phases to define the strength of temperature and zooplankton impacts on phytoplankton in different stages of bloom development. Within the constraints of an experiment, our results suggest that increased temperature and zooplankton grazing have similar effects on phytoplankton diversity, which are most apparent in the post-bloom phase, when zooplankton abundances reach the highest values. Moreover, we observed changes in zooplankton composition in response to warming and initial conditions, which can additionally affect phytoplankton diversity, because changing feeding preferences of zooplankton can affect phytoplankton community structure. We conclude that phytoplankton diversity is indirectly affected by temperature in the post-bloom phase through changing zooplankton composition and grazing activities. Before and during the bloom, however, these effects seem to be overruled by temperature enhanced bottom-up processes such as phytoplankton nutrient uptake.
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  • 99
    Publication Date: 2019-09-23
    Description: Highlights: • Phase II of the Coordinated Ocean-ice Reference Experiments (CORE-II) is introduced. • Solutions from CORE-II simulations from eighteen participating models are presented. • Mean states in the North Atlantic with a focus on AMOC are examined. • The North Atlantic solutions differ substantially among the models. • Many factors, including parameterization choices, contribute to these differences. Simulation characteristics from eighteen global ocean–sea-ice coupled models are presented with a focus on the mean Atlantic meridional overturning circulation (AMOC) and other related fields in the North Atlantic. These experiments use inter-annually varying atmospheric forcing data sets for the 60-year period from 1948 to 2007 and are performed as contributions to the second phase of the Coordinated Ocean-ice Reference Experiments (CORE-II). The protocol for conducting such CORE-II experiments is summarized. Despite using the same atmospheric forcing, the solutions show significant differences. As most models also differ from available observations, biases in the Labrador Sea region in upper-ocean potential temperature and salinity distributions, mixed layer depths, and sea-ice cover are identified as contributors to differences in AMOC. These differences in the solutions do not suggest an obvious grouping of the models based on their ocean model lineage, their vertical coordinate representations, or surface salinity restoring strengths. Thus, the solution differences among the models are attributed primarily to use of different subgrid scale parameterizations and parameter choices as well as to differences in vertical and horizontal grid resolutions in the ocean models. Use of a wide variety of sea-ice models with diverse snow and sea-ice albedo treatments also contributes to these differences. Based on the diagnostics considered, the majority of the models appear suitable for use in studies involving the North Atlantic, but some models require dedicated development effort.
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  • 100
    Publication Date: 2017-06-23
    Description: The western Woodlark Basin lies within a gold-rich metallogenic province. This area is characterized by detachment faults that record ongoing extension and act as major pathways for the circulation of hydrothermal fluids. Dredging from the flanks of a submarine ridge southeast of Cheshire Seamount, western Woodlark Basin retrieved hydrothermally altered monomictic to polymictic crackle, mosaic and chaotic breccias with at least 30% clasts N2 mmin diameter. The precursor rocks are andesitic to rhyolitic in composition, but have been intensely hydrothermally altered, with about 90% of the volcanic glass replaced by secondaryminerals. The breccias show five generations of quartz growth, with the first being related to magmatic processes and the remaining four to alteration stages including silicification, chloritization, illitization, sericitization, albitization, and sulfidation. Needle-like crystals ofmordenite (zeolite)withmultiple growth centers growon the fourth generation of quartz. Notable textural variants in the breccias are vesicles, perlitic cracks, and zoned alteration halos that mantle the rims of clasts. Electron microprobe analyses on chlorite from breccia samples have identified clinochlore as the main chlorite type and indicate a formation temperature in the range of 210–304 °C. This and the elevated Au–As–Ag–Hg–Zn–Pb–Sb contents of a mineralized sample indicate hydrothermal alteration temperatures N200 °C suggesting that these breccias may represent the upflow zone of a hydrothermal system and highlight the potential for seafloor massive sulfides in the area. The breccias show elevated contents of immobile trace elements and LREE as well as a depletion in Ta and Nb suggesting that the precursor rocks were formed in a rift-related suprasubduction environment.
    Type: Article , PeerReviewed
    Format: text
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