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  • Elsevier  (775,818)
  • Springer  (527,560)
  • American Institute of Physics  (125,313)
  • Blackwell Publishing Ltd  (33,178)
  • American Institute of Physics (AIP)  (31,708)
  • 2020-2023  (404)
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  • 1985-1989  (614,103)
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  • 101
    Publication Date: 2022-06-22
    Description: El Niño Southern Oscillation (ENSO) represents the major driver of interannual climate variability at global scale. Observational and model-based studies have fostered a long-standing debate on the shape and intensity of the ENSO influence over the Euro-Mediterranean sector. Indeed, the detection of this signal is strongly affected by the large internal variability that characterizes the atmospheric circulation in the North Atlantic–European (NAE) region. This study explores if and how the low-frequency variability of North Pacific sea surface temperature (SST) may impact the El Niño-NAE teleconnection in late winter, which consists of a dipolar pattern between middle and high latitudes. A set of idealized atmosphere-only experiments, prescribing different phases of the anomalous SST linked to the Pacific Decadal Oscillation (PDO) superimposed onto an El Niño-like forcing in the tropical Pacific, has been performed in a multi-model framework, in order to assess the potential modulation of the positive ENSO signal. The modelling results suggest, in agreement with observational estimates, that the PDO negative phase (PDO−) may enhance the amplitude of the El Niño-NAE teleconnection, while the dynamics involved appear to be unaltered. On the other hand, the modulating role of the PDO positive phase (PDO+) is not reliable across models. This finding is consistent with the atmospheric response to the PDO itself, which is robust and statistically significant only for PDO−. Its modulation seems to rely on the enhanced meridional SST gradient and the related turbulent heat-flux released along the Kuroshio–Oyashio extension. PDO− weakens the North Pacific jet, whereby favoring more poleward propagation of wave activity, strengthening the El Niño-forced Rossby wave-train. These results imply that there might be conditional predictability for the interannual Euro-Mediterranean climate variability depending on the background state.
    Description: Published
    Description: 2009–2029
    Description: 4A. Oceanografia e clima
    Description: JCR Journal
    Keywords: 01.01. Atmosphere
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 102
    Publication Date: 2022-06-22
    Description: Land surface and atmosphere are interlocked by the hydrological and energy cycles and the effects of soil water-air coupling can modulate near-surface temperatures. In this work, three paired experiments were designed to evaluate impacts of different soil moisture initial and boundary conditions on summer temperatures in the Mediterranean transitional climate regime region. In this area, evapotranspiration is not limited by solar radiation, rather by soil moisture, which therefore controls the boundary layer variability. Extremely dry, extremely wet and averagely humid ground conditions are imposed to two global climate models at the beginning of the warm and dry season. Then, sensitivity experiments, where atmosphere is alternatively interactive with and forced by land surface, are launched. The initial soil state largely affects summer near-surface temperatures: dry soils contribute to warm the lower atmosphere and exacerbate heat extremes, while wet terrains suppress thermal peaks, and both effects last for several months. Land-atmosphere coupling proves to be a fundamental ingredient to modulate the boundary layer state, through the partition between latent and sensible heat fluxes. In the coupled runs, early season heat waves are sustained by interactive dry soils, which respond to hot weather conditions with increased evaporative demand, resulting in longer-lasting extreme temperatures. On the other hand, when wet conditions are prescribed across the season, the occurrence of hot days is suppressed. The land surface prescribed by climatological precipitation forcing causes a temperature drop throughout the months, due to sustained evaporation of surface soil water. Results have implications for seasonal forecasts on both rain-fed and irrigated continental regions in transitional climate zones.
    Description: Published
    Description: 1943–1963
    Description: 4A. Oceanografia e clima
    Description: JCR Journal
    Keywords: 01.01. Atmosphere ; 03.02. Hydrology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 103
    Publication Date: 2022-05-24
    Description: The assessment of potential radon-hazardous environments is nowadays a critical issue in planning, monitoring, and developing appropriate mitigation strategies. Although some geological structures (e.g., fault systems) and other geological factors (e.g., radionuclide content, soil organic or rock weathering) can locally affect the radon occurrence, at the basis of a good implementation of radon-safe systems, optimized modelling at territorial scale is required. The use of spatial regression models, adequately combining different types of predictors, represents an invaluable tool to identify the relationships between radon and its controlling factors as well as to construct Geogenic Radon Potential (GRP) maps of an area. In this work, two GRP maps were developed based on field measurements of soil gas radon and thoron concentrations and gamma spectrometry of soil and rock samples of the Euganean Hills (northern Italy) district. A predictive model of radon concentration in soil gas was reconstructed taking into account the relationships among the soil gas radon and seven predictors: terrestrial gamma dose radiation (TGDR), thoron (220Rn), fault density (FD), soil permeability (PERM), digital terrain model (SLOPE), moisture index (TMI), heat load index (HLI). These predictors allowed to elaborate local spatial models by using the Empirical Bayesian Regression Kriging (EBRK) in order to find the best combination and define the GRP of the Euganean Hills area. A second GRP map based on the Neznal approach (GRPNEZ) has been modelled using the TGDR and 220Rn, as predictors of radon concentration, and FD as predictor of soil permeability. Then, the two GRP maps have been compared. Results highlight that the radon potential is mainly driven by the bedrock type but the presence of fault systems and topographic features play a key role in radon migration in the subsoil and its exhalation at the soil/atmosphere boundary.
    Description: Published
    Description: 152064
    Description: 6A. Geochimica per l'ambiente e geologia medica
    Description: JCR Journal
    Keywords: Euganean Hills ; Geogenic Radon Potential ; Geostatistics ; Natural radioactivity ; Radon ; Regression kriging ; 04. Solid Earth
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 104
    Publication Date: 2022-06-30
    Description: A full review of the 79 CE Plinian eruption of Vesuvius is presented through a multidisciplinary approach, exploiting the integration of historical, stratigraphic, sedimentological, petrological, geophysical, paleoclimatic, and modelling studies dedicated to this famous and devastating natural event. All studies have critically been reviewed and integrated with original data, spanning from proximal to ultradistal findings of the 79 CE eruption products throughout the Mediterranean. The work not only combines different investigation approaches (stratigraphic, petrological, geophysical, modelling), but also follows temporally the 79 CE eruptive and depo sitional events, from the magma chamber to the most distal tephras. This has allowed us first to compile a full database of all findings of those deposits, then to relate the products (the deposits) to the genetic thermo mechanical processes (the eruption), and lastly to better assess both the local and regional impacts of the 79 CE eruption in the environment. This information leads to a number of open issues (e.g., regional environmental impact vs. local pyroclastic current impact) that are worthy of further investigations, although the 79 CE eruption of Vesuvius is one of the best studied eruptions in volcanology. The structure of the work follows three macro-categories, the historical aspects, the products, and the processes of the 79 CE eruption. For each investigation approach (from stratigraphy to modelling), all dedicated studies and original data are discussed. The open issues are then synthesized in the discussion under a global view of Plinian eruptions, from the magma setting to its dispersion as pyroclasts flowing on the surface vs. falling from the volcanic plume. In this way, a lesson from the past, in particular from the well-studied 79 CE eruption of Vesuvius, will be of help for a better synchronization of processes and products in future developments. Lastly, various aspects for volcanic hazard assessment of Plinian eruptions are highlighted from the tephra distribution and modelling points of view, as these large natural phenomena can have a larger impact than previously thought, also at other active volcanoes.
    Description: Published
    Description: 104072
    Description: 1V. Storia eruttiva
    Description: 4V. Processi pre-eruttivi
    Description: 5V. Processi eruttivi e post-eruttivi
    Description: 6V. Pericolosità vulcanica e contributi alla stima del rischio
    Description: JCR Journal
    Keywords: 79 CE eruption ; Vesuvius ; Plinian eruption ; Pompeii ; Multidisciplinary approach ; Pyroclastic succession ; Pyroclastic currents ; 79 CE tephra dispersal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 105
    Publication Date: 2022-09-13
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Huntley, N., Brandt, M., Becker, C., Miller, C., Meiling, S., Correa, A., Holstein, D., Muller, E., Mydlarz, L., Smith, T., & Apprill, A. Experimental transmission of Stony Coral Tissue Loss Disease results in differential microbial responses within coral mucus and tissue. ISME Communications, 2(1), (2022): 46, https://doi.org/10.1038/s43705-022-00126-3.
    Description: Stony coral tissue loss disease (SCTLD) is a widespread and deadly disease that affects nearly half of Caribbean coral species. To understand the microbial community response to this disease, we performed a disease transmission experiment on US Virgin Island (USVI) corals, exposing six species of coral with varying susceptibility to SCTLD. The microbial community of the surface mucus and tissue layers were examined separately using a small subunit ribosomal RNA gene-based sequencing approach, and data were analyzed to identify microbial community shifts following disease acquisition, potential causative pathogens, as well as compare microbiota composition to field-based corals from the USVI and Florida outbreaks. While all species displayed similar microbiome composition with disease acquisition, microbiome similarity patterns differed by both species and mucus or tissue microhabitat. Further, disease exposed but not lesioned corals harbored a mucus microbial community similar to those showing disease signs, suggesting that mucus may serve as an early warning detection for the onset of SCTLD. Like other SCTLD studies in Florida, Rhodobacteraceae, Arcobacteraceae, Desulfovibrionaceae, Peptostreptococcaceae, Fusibacter, Marinifilaceae, and Vibrionaceae dominated diseased corals. This study demonstrates the differential response of the mucus and tissue microorganisms to SCTLD and suggests that mucus microorganisms may be diagnostic for early disease exposure.
    Description: This work was funded by an International Coral Reef Society student grant to N.H., National Science Foundation (NSF) VI EPSCoR 0814417 and 1946412 and NSF (Biological Oceanography) award numbers 1928753 to MEB and TBS, 1928609 to AMSC, 1928817 to EMM, 19228771 to LDM, 1927277 to DMH as well as 1928761 and 1938112 to AA, NSF EEID award number 2109622 to MEB, AA, LDM, and AMSC, and a NOAA OAR Cooperative Institutes award to AA (#NA19OAR4320074). Samples were collected under permit #DFW19057U authorized by the Department of Planning and Natural Resources Coastal Zone Management.
    Repository Name: Woods Hole Open Access Server
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  • 106
    Publication Date: 2022-09-13
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Nelson, R. K., Scarlett, A. G., Gagnon, M. M., Holman, A. I., Reddy, C. M., Sutton, P. A., & Grice, K. Characterizations and comparison of low sulfur fuel oils compliant with 2020 global sulfur cap regulation for international shipping. Marine Pollution Bulletin, 180, (2022): 113791, https://doi.org/10.1016/j.marpolbul.2022.113791.
    Description: The International Marine Organization 2020 Global Sulfur Cap requires ships to burn fuels with 〈0.50% S and some countries require 〈0.10% S in certain Sulfur Emission Control Areas but little is known about these new types of fuels. Using both traditional GC–MS and more advanced chromatographic and mass spectrometry techniques, plus stable isotopic, δ13C and δ2H, analyses of pristane, phytane and n-alkanes, the organic components of a suite of three 0.50% S and three 0.10% S compliant fuels were characterized. Two oils were found to be near identical but all of the remaining oils could be forensically distinguished by comparison of their molecular biomarkers and by the profiles of the heterocyclic parent and alkylated homologues. Oils could also be differentiated by their δ13C and δ2H of n-alkanes and isoprenoids. This study provides important forensic data that may prove invaluable in the event of future oil spills.
    Description: This research did not receive any specific grant from funding agencies in the public, commercial, or not-for-profit sectors. CMR and RKN were supported by the National Science Foundation (OCE-1634478 and OCE-1756242). GC × GC analysis support provided by WHOI's Investment in Science Fund.
    Keywords: International Maritime Organisation ; Biomarkers ; Fuel oil ; Heterocyclics ; GC × GC ; Mass spectrometry
    Repository Name: Woods Hole Open Access Server
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  • 107
    Publication Date: 2022-09-05
    Description: The chemical composition of gases emitted by active volcanoes reflects both magma degassing and shallower processes, such as fluid-rock hydrothermal interaction and mixing with atmospheric-derived fluids. Untangling the magmatic fluid endmember within surface gas emission is therefore challenging, even with the use of well-known magma degassing tracers such as noble gases. Here, we investigate the deep magmatic fluid composition at the Nisyros caldera (Aegean Arc, Greece) by measuring nitrogen and noble gas abundances and isotopes in naturally degassing fumaroles. Gas samples were collected from 32 fumarolic vents at water-boiling temperature between 2018 and 2021. These fumaroles are admixtures of magmatic fluids typical of subduction zones, groundwater (or air saturated water, ASW), and air. The N2, He, and Ar composition of the magmatic endmember is calculated by reverse mixing modeling and shows N2/He = 31.8 ± 4.5, N2/Ar = 281.6, d15N = +7 ± 3 ‰, 3He/4He = 6.2 Ra (where Ra is air 3He/4He), and 40Ar/36Ar = 551.6 ± 19.8. Although N2/He is significantly low with respect to typical values for arc volcanoes (1,000–10,000), the contribution of subducted sediments to the Aegean Arc magma generation is reflected by the positive d15N values of Nisyros fumaroles. The low N2/He ratio indicates N2-depletion due to solubility-controlled differential degassing of an upper-crustal silicic (dacitic/rhyodacitic) melt in a high-crystallinity reservoir. We compare our 2018–2021 data with N2, He, and Ar values collected from the same fumaroles during a hydrothermal unrest following the seismic crisis in 1996–1997. Results show additions of both magmatic fluid and ASW during this unrest. In the same period, fumarolic vents display an increase in magmatic species relative to hydrothermal gas, such as CO2/CH4 and He/CH4 ratios, an increase of 50 C in the equilibrium temperature of the hydrothermal system (up to 325 C), and greater amounts of vapor separation. These variations reflect an episode of magmatic fluid expulsion during the seismic crisis. The excess of heat and mass supplied by the magmatic fluid injection is then dissipated through boiling of deeper and peripheral parts of the hydrothermal system. Reverse mixing modeling of fumarolic N2-He-Ar has therefore important ramifications not only to disentangle the magmatic signature from gases emitted during periods of dormancy, but also to trace episodes of magmatic outgassing and better understand the state of the upper crustal reservoir.
    Description: Published
    Description: 68-84
    Description: 2V. Struttura e sistema di alimentazione dei vulcani
    Description: 4V. Processi pre-eruttivi
    Description: JCR Journal
    Keywords: Noble gases ; Nitrogen isotope ; Mixing modeling ; Magmatic degassing ; High-crystallinity mush ; Caldera ; Unrest ; CO2 ; 04.08. Volcanology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 108
    Publication Date: 2022-10-27
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Molines, A. T., Lemière, J., Gazzola, M., Steinmark, I. E., Edrington, C. H., Hsu, C.-T., Real-Calderon, P., Suhling, K., Goshima, G., Holt, L. J., Thery, M., Brouhard, G. J., & Chang, F. Physical properties of the cytoplasm modulate the rates of microtubule polymerization and depolymerization. Developmental Cell, 57(4), (2022): 466-479.e6, https://doi.org/10.1016/j.devcel.2022.02.001.
    Description: The cytoplasm is a crowded, visco-elastic environment whose physical properties change according to physiological or developmental states. How the physical properties of the cytoplasm impact cellular functions in vivo remains poorly understood. Here, we probe the effects of cytoplasmic concentration on microtubules by applying osmotic shifts to fission yeast, moss, and mammalian cells. We show that the rates of both microtubule polymerization and depolymerization scale linearly and inversely with cytoplasmic concentration; an increase in cytoplasmic concentration decreases the rates of microtubule polymerization and depolymerization proportionally, whereas a decrease in cytoplasmic concentration leads to the opposite. Numerous lines of evidence indicate that these effects are due to changes in cytoplasmic viscosity rather than cellular stress responses or macromolecular crowding per se. We reconstituted these effects on microtubules in vitro by tuning viscosity. Our findings indicate that, even in normal conditions, the viscosity of the cytoplasm modulates the reactions that underlie microtubule dynamic behaviors.
    Description: This work was supported by grants to F.C. (NIH GM115185, NIH GM056836, NIH GM146438), to L.J.H. (American Cancer Society RSG-19-073-01-TBE, Pershing Square Sohn Cancer Award, Chan Zuckerberg Initiative, NIH GM132447 and NIH CA240765), to G.G. (JSPS KAKENHI 17H06471 and 18KK0202), to K.S. (UK’s Biotechnology and Biological Sciences Research Council (BBSRC) grant BB/R004803/1) and to M.T. (ERC Consolidator Grant 771599). I.E.S. was supported by King’s College London through a LIDo (London Interdisciplinary Doctoral programme) iCASE studentship.
    Keywords: Cytoskeleton dynamics ; Microtubules ; Cytoplasm ; Crowding ; Viscosity ; Diffusion ; Density ; Rheology ; Mitosis ; Fission yeast Schizosaccharomyces pombe
    Repository Name: Woods Hole Open Access Server
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  • 109
    Publication Date: 2022-10-26
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Jonell, T., Giosan, L., Clift, P., Carter, A., Bretschneider, L., Hathorne, E., Barbarano, M., Garzanti, E., Vezzoli, G., & Naing, T. No modern Irrawaddy River until the late Miocene-Pliocene. Earth and Planetary Science Letters, 584, (2022): 117516, https://doi.org/10.1016/j.epsl.2022.117516.
    Description: The deposits of large Asian rivers with unique drainage geometries have attracted considerable attention due to their explanatory power concerning tectonism, surface uplift and upstream drainage evolution. This study presents the first petrographic, heavy mineral, Nd and Sr isotope geochemistry, and detrital zircon geochronology results from the Holocene Irrawaddy megadelta alongside modern and ancient sedimentary provenance datasets to assess the late Neogene evolution of the Irrawaddy River. Contrary to models advocating a steady post-middle Miocene river, we reveal an evolution of the Irrawaddy River more compatible with regional evidence for kinematic reorganization in Myanmar during late-stage India-Asia collision. Quaternary sediments are remarkably consistent in terms of provenance but highlight significant decoupling amongst fine and coarse fraction 87Sr/86Sr and due to hydraulic sorting. Only well after the late Miocene do petrographic, heavy mineral, isotope geochemistry, and detrital zircon U–Pb results from the trunk Irrawaddy and its tributaries achieve modern-day signatures. The primary driver giving rise to the geometry and provenance signature of the modern Irrawaddy River was regional late Miocene (≤10 Ma) basin inversion coupled with uplift and cumulative displacement along the Sagaing Fault. Middle to late Miocene provenance signatures cannot be reconciled with modern river geometries, and thus require significant loss of headwaters feeding the Chindwin subbasin after ∼14 Ma and the northern Shwebo subbasin after ∼11 Ma. Large-scale reworking after ∼7 Ma is evidenced by modern Irrawaddy River provenance, by entrenchment of the nascent drainage through Plio-Pleistocene inversion structures, and in the transfer of significant sediment volumes to the Andaman Sea.
    Description: TNJ was supported in initial stages of this project by a Postdoctoral Research Fellowship at UQ and software support by LSU. LG thanks support from the Andrew W. Mellon Foundation via Woods Hole Oceanographic Institution. The Charles T. McCord chair at LSU funded coring and detrital zircon U–Pb geochronology essential to the study.
    Keywords: Provenance ; Sediment ; Irrawaddy ; Zircon ; Isotope geochemistry ; Petrography
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  • 110
    Publication Date: 2022-10-11
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Våge, K., Semper, S., Valdimarsson, H., Jónsson, S., Pickart, R., & Moore, G. Water mass transformation in the Iceland Sea: contrasting two winters separated by four decades. Deep Sea Research Part I: Oceanographic Research Papers, 186, (2022): 103824, https://doi.org/10.1016/j.dsr.2022.103824.
    Description: Dense water masses formed in the Nordic Seas flow across the Greenland–Scotland Ridge and contribute substantially to the lower limb of the Atlantic Meridional Overturning Circulation. Originally considered an important source of dense water, the Iceland Sea gained renewed interest when the North Icelandic Jet — a current transporting dense water from the Iceland Sea into Denmark Strait — was discovered in the early 2000s. Here we use recent hydrographic data to quantify water mass transformation in the Iceland Sea and contrast the present conditions with measurements from hydrographic surveys conducted four decades earlier. We demonstrate that the large-scale hydrographic structure of the central Iceland Sea has changed significantly over this period and that the locally transformed water has become less dense, in concert with a retreating sea-ice edge and diminished ocean-to-atmosphere heat fluxes. This has reduced the available supply of dense water to the North Icelandic Jet, but also permitted densification of the East Greenland Current during its transit through the presently ice-free western Iceland Sea in winter. Together, these changes have significantly altered the contribution from the Iceland Sea to the overturning in the Nordic Seas over the four decade period.
    Description: Support for this work was provided by the Trond Mohn Foundation, Norway under grant BFS2016REK01 (K.V. and S.S.), the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement no. 101022251 (S.S.), the US National Science Foundation under grants OCE-1259618 and OCE- 1948505 (R.S.P), and the Natural Sciences and Engineering Research Council of Canada (G.W.K.M).
    Keywords: Iceland Sea ; Water mass transformation ; North Icelandic Jet ; Iceland–Faroe Slope Jet ; East Greenland Current ; Denmark Strait overflow water
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  • 111
    Publication Date: 2022-10-18
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Pold, G., Kwiatkowski, B. L., Rastetter, E. B., & Sistla, S. A. Sporadic P limitation constrains microbial growth and facilitates SOM accumulation in the stoichiometrically coupled, acclimating microbe-plant-soil model. Soil Biology & Biochemistry, 165, (2022): 108489, https://doi.org/10.1016/j.soilbio.2021.108489.
    Description: Requirements for biomass carbon (C), nitrogen (N), and phosphorus (P) constrain organism growth and are important agents for structuring ecosystems. Arctic tundra habitats are strongly nutrient limited as decomposition and recycling of nutrients are slowed by low temperature. Modeling interactions among these elemental cycles affords an opportunity to explore how disturbances such as climate change might differentially affect these nutrient cycles. Here we introduce a C–N–P-coupled version of the Stoichiometrically Coupled Acclimating Microbe-Plant-Soil (SCAMPS) model, “SCAMPS-CNP”, and a corresponding modified CN-only model, “SCAMPS-CN”. We compared how SCAMPS-CNP and the modified SCAMPS-CN models project a moderate (RCP 6.0) air warming scenario will impact tussock tundra nutrient availability and ecosystem C stocks. SCAMPS-CNP was characterized by larger SOM and smaller organism C stocks compared to SCAMPS-CN, and a greater reduction in ecosystem C stocks under warming. This difference can largely be attributed to a smaller microbial biomass in the CNP model, which, instead of being driven by direct costs of P acquisition, was driven by variable resource limitation due to asynchronous C, N, and P availability and demand. Warming facilitated a greater relative increase in plant and microbial biomass in SCAMPS-CNP, however, facilitated by increased extracellular enzyme pools and activity, which more than offset the metabolic costs associated with their production. Although the microbial community was able to flexibly adapt its stoichiometry and become more bacteria-like (N-rich) in both models, its stoichiometry deviated further from its target value in the CNP model because of the need to balance cellular NP ratio. Our results indicate that seasonality and asynchrony in resources affect predicted changes in ecosystem C storage under warming in these models, and therefore build on a growing body of literature indicating stoichiometry should be considered in carbon cycling projections.
    Description: This work was funded by the National Science Foundation Signals in the Soil grant number 1841610 to SAS and EBR.
    Keywords: Stoichiometry ; Modeling ; Microbial physiology ; Tundra ; Climate change
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  • 112
    Publication Date: 2022-10-18
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Tamborski, J., Cai, P., Eagle, M., Henderson, P., & Charette, M. Revisiting 228Th as a tool for determining sedimentation and mass accumulation rates. Chemical Geology, 607, (2022): 121006, https://doi.org/10.1016/j.chemgeo.2022.121006.
    Description: The use of 228Th has seen limited application for determining sedimentation and mass accumulation rates in coastal and marine environments. Recent analytical advances have enabled rapid, precise measurements of particle-bound 228Th using a radium delayed coincidence counting system (RaDeCC). Herein we review the 228Th cycle in the marine environment and revisit the historical use of 228Th as a tracer for determining sediment vertical accretion and mass accumulation rates in light of new measurement techniques. Case studies comparing accumulation rates from 228Th and 210Pb are presented for a micro-tidal salt marsh and a marginal sea environment. 228Th and 210Pb have been previously measured in mangrove, deltaic, continental shelf and ocean basin environments, and a literature synthesis reveals that 228Th (measured via alpha or gamma spectrometry) derived accumulation rates are generally equal to or greater than estimates derived from 210Pb, reflecting different integration periods. Use of 228Th is well-suited for shallow (〈15 cm) cores over decadal timescales. Application is limited to relatively homogenous sediment profiles with minor variations in grain size and minimal bioturbation. When appropriate conditions are met, complimentary use of 228Th and 210Pb can demonstrate that the upper layers of a core are undisturbed and can improve spatial coverage in mapping accumulation rates due to the higher sample throughput for sediment 228Th.
    Description: This research was undertaken thanks in part to funding from the Canada First Research Excellence Fund, through the Ocean Frontier Institute. This project was supported by U.S. Geological Survey Coastal and Marine Hazards and Resources Program. Any use of trade, firm or product names is for descriptive purposes only and does not imply endorsement by the U.S. Government. PC acknowledges the support of the Natural Science Foundation of China (NSFC) through Grants No. 92058205.
    Keywords: Sedimentation ; Mass accumulation ; Thorium isotopes ; Lead-210 ; Wetlands ; Sea level rise
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  • 113
    Publication Date: 2022-10-26
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Tyne, R., Barry, P., Cheng, A., Hillegonds, D., Kim, J.-H., McIntosh, J., & Ballentine, C. Basin architecture controls on the chemical evolution and 4He distribution of groundwater in the Paradox Basin. Earth and Planetary Science Letters, 589, (2022):117580, https://doi.org/10.1016/j.epsl.2022.117580.
    Description: Fluids such as 4He, H2, CO2 and hydrocarbons accumulate within Earth's crust. Crustal reservoirs also have potential to store anthropogenic waste (e.g., CO2, spent nuclear fuel). Understanding fluid migration and how this is impacted by basin stratigraphy and evolution is key to exploiting fluid accumulations and identifying viable storage sites. Noble gases are powerful tracers of fluid migration and chemical evolution, as they are inert and only fractionate by physical processes. The distribution of 4He, in particular, is an important tool for understanding diffusion within basins and for groundwater dating. Here, we report noble gas isotope and abundance data from 36 wells across the Paradox Basin, Colorado Plateau, USA, which has abundant hydrocarbon, 4He and CO2 accumulations. Both groundwater and hydrocarbon samples were collected from 7 stratigraphic units, including within, above and below the Paradox Formation (P.Fm) evaporites. Air-corrected helium isotope ratios (0.0046 - 0.127 RA) are consistent with radiogenic overprinting of predominantly groundwater-derived noble gases. The highest radiogenic noble gas concentrations are found in formations below the P.Fm. Atmosphere-derived noble gas signatures are consistent with meteoric recharge and multi-phase interactions both above and below the P.Fm, with greater groundwater-gas interactions in the shallower formations. Vertical diffusion models, used to reconstruct observed groundwater helium concentrations, show the P.Fm evaporite layer to be effectively impermeable to helium diffusion and a regional barrier for mobile elements but, similar to other basins, a basement 4He flux is required to accumulate the 4He concentrations observed beneath the P.Fm. The verification that evaporites are regionally impermeable to diffusion, of even the most diffusive elements, is important for sub-salt helium and hydrogen exploration and storage, and a critical parameter in determining 4He-derived mean groundwater ages. This is critical to understanding the role of basin stratigraphy and deformation on fluid flow and gas accumulation.
    Description: This work was supported by a Natural Environment Research Council studentship to R.L. Tyne (Grant ref. NE/L002612/1). We gratefully acknowledge the William F. Keck Foundation for support of this research, and the National Science Foundation (NSF EAR #2120733). J.C. McIntosh and C.J. Ballentine are fellows of the CIFAR Earth4D Subsurface Science and Exploration Program. The authors would like to acknowledge the U.S. Bureau of Reclamation, Paradox Resources, Navajo Petroleum, US Oil and Gas INC, Anson Resources, Lantz Indergard (Lisbon Valley Mining Co.), Ambria Dell'Oro and Mohammad Marza for help with sampling.
    Keywords: Noble gases ; Helium ; Paradox Basin ; Crustal fluid dating ; Groundwater migration
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  • 114
    Publication Date: 2022-10-26
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Broadley, M., Byrne, D., Ardoin, L., Almayrac, M., Bekaert, D., & Marty, B. High precision noble gas measurements of hydrothermal quartz reveal variable loss rate of Xe from the Archean atmosphere. Earth and Planetary Science Letters, 588, (2022): 117577, https://doi.org/10.1016/j.epsl.2022.117577.
    Description: Determining the composition of the Archean atmosphere and oceans is vital to understanding the environmental conditions that existed on the surface of the early Earth. The analysis of atmospheric remnants in fluid inclusions trapped in Archean-aged samples has shown that the Xe isotopic signature of the Archean atmosphere progressively evolved via mass-dependent fractionation, arriving at a modern atmospheric composition around the Archean-Proterozoic transition. The mechanisms driving this evolution are however not well constrained, and it is not yet clear whether the evolution proceeded continuously or via episodic bursts. Providing further constraints on the evolution of Xe in the Archean atmosphere is hampered by the limited amounts of atmospheric gas trapped within fluid inclusions during mineral formation, which impacts the precision at which the Archean atmosphere can be determined. Here, we develop a new crush-and-accumulate extraction technique that enables the heavy noble gases (Ar, Kr and Xe) released from crushing large quantities of hydrothermal quartz to be accumulated and analysed to a higher precision than was previously possible. Using this new technique, we re-evaluate the composition of atmospheric gases trapped within fluid inclusions of 3.3 Ga quartz samples from Barberton, South Africa. We find that the Xe isotopic signature is fractionated by +10.3 ± 1.0‰u−1 (2 SE) relative to modern atmosphere, which is within uncertainty of, but slightly lower than, the previous determination of 12.9 ± 2.4‰u−1 for this sample (Avice et al., 2017). We show for the first time that the Kr/Xe ratio measured within Archean quartz samples is enriched in Xe compared to the modern atmosphere, demonstrating that the atmosphere has lost Xe since the Archean. This further reinforces the proposal of atmospheric escape as the primary mechanism for Earth's Xe loss. We further show that the atmospheric Kr/Xe and Xe isotope fractionation recorded in the Barberton quartz at 3.3 Ga is incompatible with a model describing atmospheric loss at a continuous rate under a constant fractionation factor. This gives credence to numerical models of hydrodynamic escape, which suggest that Xe was lost from the Archean atmosphere in episodic bursts rather than at a constant rate. Refining the evolution curve of atmospheric Xe isotopes using the new technique presented here has the potential to shed light on discrete atmospheric events that punctuated the evolution of the Archean Earth and accompanied the evolution of life.
    Description: This study was supported by the European Research Council (PHOTONIS project, grant agreement No. 695618). This is CRPG contribution #2820.
    Keywords: Archean atmosphere ; Noble gases ; Xenon ; Atmospheric escape
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  • 115
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Li, F., Lozier, M. S., Holliday, N. P., Johns, W. E., Le Bras, I. A., Moat, B. I., Cunningham, S. A., & de Jong, M. F. Observation-based estimates of heat and freshwater exchanges from the subtropical North Atlantic to the Arctic. Progress in Oceanography, 197, (2021): 102640, https://doi.org/10.1016/j.pocean.2021.102640.
    Description: Continuous measurements from the OSNAP (Overturning in the Subpolar North Atlantic Program) array yield the first estimates of trans-basin heat and salinity transports in the subpolar latitudes. For the period from August 2014 to May 2018, there is a poleward heat transport of 0.50 ± 0.05 PW and a poleward salinity transport of 12.5 ± 1.0 Sv across the OSNAP section. Based on the mass and salt budget analyses, we estimate that a surface freshwater input of 0.36 ± 0.05 Sv over the broad subpolar-Arctic region is needed to balance the ocean salinity change created by the OSNAP transports. The overturning circulation is largely responsible for setting these heat and salinity transports (and the derived surface freshwater input) derived from the OSNAP array, while the gyre (isopycnal) circulation contributes to a lesser, but still significant, extent. Despite its relatively weak overturning and heat transport, the Labrador Sea is a strong contributor to salinity and freshwater changes in the subpolar region. Combined with trans-basin transport estimates at other locations, we provide new estimates for the time-mean surface heat and freshwater divergences over a wide domain of the Arctic-North Atlantic region to the north and south of the OSNAP line. Furthermore, we estimate the total heat and freshwater exchanges across the surface area of the extratropical North Atlantic between the OSNAP and the RAPID-MOCHA (RAPID Meridional Overturning Circulation and Heat-flux Array) arrays, by combining the cross-sectional transports with vertically-integrated ocean heat and salinity content. Comparisons with the air-sea heat and freshwater fluxes from atmospheric reanalysis products show an overall consistency, yet with notable differences in the magnitudes during the observation time period.
    Description: F.L. and M.S.L. were supported by the National Science Foundation (OCE-1948335). W.E.J. was supported by the National Science Foundation grants RAPID (OCE-1332978 and OCE-1926008) and OSNAP (OCE-1756231 and OCE-1948198). I.A.L.B. was supported by the National Science Foundation (OCE-1756272 and OCE-2038481). B.M. was supported by the UK Natural Environment Research Council for the RAPID-AMOC program and the ACSIS program (NE/N018044/1). S.A.C. and N.P.H. were supported by UK NERC National Capability programmes the Extended Ellett Line and CLASS (NE/R015953/1), NERC grants UK OSNAP (NE/K010875/1, NE/K010875/2, NE/K010700/1), UK OSNAP Decade (NE/T00858X/1, NE/T008938/1). S.A.C. received additional supports from the Blue-Action project (European Union’s Horizon 2020 research and innovation program, grant 727852) and the iAtlantic project (European Union’s Horizon 2020 research and innovation program, grant 210522255).
    Keywords: Oceanic heat and salinity transports ; Surface heat and freshwater exchange ; Overturning and gyre circulation
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  • 116
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Menezes, V. V. Advective pathways and transit times of the Red Sea Overflow Water in the Arabian Sea from Lagrangian simulations. Progress in Oceanography, 199, (2021): 102697, https://doi.org/10.1016/j.pocean.2021.102697.
    Description: The present study investigates the advective pathways and transit times of virtual particles released in the Red Sea outflow area as a proxy for the poorly understood spreading of the Red Sea Overflow Water (RSOW) in the Arabian Sea. This work uses the Parcels toolbox, a Lagrangian framework, to simulate tens of thousands of trajectories under different initial conditions. Six different Lagrangian simulations are performed at isobaric and isopycnal surfaces within the RSOW layer. All simulations are based on the eddy-rich GLORYS12 reanalysis that merges almost all in-situ (temperature–salinity) and satellite observations collected over the last two decades into a dynamical framework. This study shows that GLORYS12 reproduces relatively well the climatological seasonal cycle of the RSOW to the Gulf of Aden and essential characteristics of the exchange at the Strait of Bab al-Mandab. Statistical comparisons between synthetic trajectories and RAFOS floats in the Gulf of Aden corroborate the quality of GLORYS12 velocity fields used for the Lagrangian simulations. Six main advective pathways are uncovered (by order of preference): Southwest, Northwest, Socotra Passage, Central, Eastern, and Southern. Trajectories from Argo floats give observational support for some of these paths. Although most particles are exported out of the Arabian Sea off Somalia, the simulations reveal robust connectivity of the RSOW to the Arabian Sea interior and its eastern boundary. The fact that particles have long trajectories in the interior increases the potential of RSOW mixing with the fresher and oxygen-poor ambient waters. Thus, these pathways may have profound implications for the salt and oxygen budgets in the Arabian Sea and beyond since the RSOW is also part of the global overturning circulation and exported out of the Indian Ocean via the Agulhas Current. Transit time distributions indicate that it takes about six months for outflow-originated particles to spread over the entire Gulf of Aden and one to three years to be exported along the western boundary, toward Somalia (Socotra Passage and Southwest pathways) and off the Yemeni–Omani coast (Northwest Pathway). In contrast, reaching the eastern boundary takes much longer. North of 14N, the most frequent time is around 10–15 years, and about 20–25 years at the southeastern Arabian Sea. Hence, the RSOW can often carry oxygen to the western boundary but not to the eastern basin. This may contribute to the eastern shift of the Arabian Sea Oxygen Minimum Zone, a subject that deserves investigation.
    Description: This research was supported by the National Science Foundation (NSF) grant number OCE-1736823.
    Keywords: Salinity ; Northwest Indian Ocean ; Parcels toolbox ; Trajectories ; Oxygen ; Particles
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  • 117
    Publication Date: 2022-05-27
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Schaafsma, F. L., David, C. L., Kohlbach, D., Ehrlich, J., Castellani, G., Lange, B. A., Vortkamp, M., Meijboom, A., Fortuna-Wunsch, A., Immerz, A., Cantzler, H., Klasmeier, A., Zakharova, N., Schmidt, K., Van de Putte, A. P., van Franeker, J. A., & Flores, H. Allometric relationships of ecologically important Antarctic and Arctic zooplankton and fish species. Polar Biology 45, (2022): 203–224, https://doi.org/10.1007/s00300-021-02984-4.
    Description: Allometric relationships between body properties of animals are useful for a wide variety of purposes, such as estimation of biomass, growth, population structure, bioenergetic modelling and carbon flux studies. This study summarizes allometric relationships of zooplankton and nekton species that play major roles in polar marine food webs. Measurements were performed on 639 individuals of 15 species sampled during three expeditions in the Southern Ocean (winter and summer) and 2374 individuals of 14 species sampled during three expeditions in the Arctic Ocean (spring and summer). The information provided by this study fills current knowledge gaps on relationships between length and wet/dry mass of understudied animals, such as various gelatinous zooplankton, and of animals from understudied seasons and maturity stages, for example, for the krill Thysanoessa macrura and larval Euphausia superba caught in winter. Comparisons show that there is intra-specific variation in length–mass relationships of several species depending on season, e.g. for the amphipod Themisto libellula. To investigate the potential use of generalized regression models, comparisons between sexes, maturity stages or age classes were performed and are discussed, such as for the several krill species and T. libellula. Regression model comparisons on age classes of the fish E. antarctica were inconclusive about their general use. Other allometric measurements performed on carapaces, eyes, heads, telsons, tails and otoliths provided models that proved to be useful for estimating length or mass in, e.g. diet studies. In some cases, the suitability of these models may depend on species or developmental stages.
    Description: The Netherlands Ministry of Agriculture, Nature and Food Quality (LNV) funded this research under its Statutory Research Task Nature & Environment WOT-04-009-047.04. This research was further supported by the Netherlands Polar Programme (NPP), managed by the Dutch Research Council (NWO) under project nr. ALW 866.13.009 (ICEFLUX-NL). The study is associated with the Helmholtz Association Young Investigators Group ICEFLUX: Ice-ecosystem carbon flux in polar oceans (VH-NG-800) and contributes to the Helmholtz (HGF) research Programme Changing Earth – Sustaining our Future, Research Field Earth & Environment, Topic 6.1 and 6.3. NZ was supported by the GEOMAR project CATS: The Changing Arctic Transpolar System (BMBF-FK2 CATS). Contributions by KS were funded by the UK’s Natural Environment Research Council MOSAiC-Thematic project SYM-PEL: “Quantifying the contribution of sympagic versus pelagic diatoms to Arctic food webs and biogeochemical fluxes: application of source-specific highly branched isoprenoid biomarkers” (NE/S002502/1). BAL was further supported by the Norwegian Polar Institute and funding to M. Granskog from the Research Council of Norway to projects CAATEX (280531) and HAVOC (280292). DK was further funded by the Research Council of Norway through the project The Nansen Legacy (RCN # 276730) at the Norwegian Polar Institute. GC was further funded by the project EcoLight (03V01465) as part of the joint NERC/BMBF programme Changing Arctic Ocean. AVdP received support from Belspo in the framework the EU Lifewatch ERIC (Grant agreement FR/36/AN3) and the FEDTwin. Expedition Grant Numbers: ARK XVII/3 (PS80), AWI-PS81_01 (WISKY), ANT-XXIX/9 (PS82), AWI-PS89_02 (SIPES), AWI_PS92_00 (TRANSSIZ) and AWI_PS106/1_2-00 (SIPCA).
    Keywords: Arctic Ocean ; Southern Ocean ; Length ; Mass ; Zooplankton ; Fish ; Regression models
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  • 118
    Publication Date: 2022-05-27
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Burnham, K. A., Nowicki, R. J., Hall, E. R., Pi, J., & Page, H. N. Effects of ocean acidification on the performance and interaction of fleshy macroalgae and a grazing sea urchin. Journal of Experimental Marine Biology and Ecology, 547, (2022): 151662, https://doi.org/10.1016/j.jembe.2021.151662.
    Description: When predicting the response of marine ecosystems to climate change, it is increasingly recognized that understanding the indirect effects of ocean acidification on trophic interactions is as important as studying direct effects on organism physiology. Furthermore, comprehensive studies that examine these effects simultaneously are needed to identify and link the underlying mechanisms driving changes in species interactions. Using an onshore ocean acidification simulator system, we investigated the direct and indirect effects of elevated seawater pCO2 on the physiology and trophic interaction of fleshy macroalgae and the grazing sea urchin Lytechinus variegatus. Macroalgal (Dictyota spp.) biomass increased despite decreased photosynthetic rates after two-week exposure to elevated pCO2. Algal tissue carbon content remained constant, suggesting the use of alternative carbon acquisition pathways beneficial to growth under acidification. Higher C:N ratios driven by a slight reduction in N content in algae exposed to elevated pCO2 suggest a decrease in nutritional content under acidification. Urchin (L. variegatus) respiration, biomass, and righting time did not change significantly after six-week exposure to elevated pCO2, indicating that physiological stress and changes in metabolism are not mechanisms through which the trophic interaction was impacted. Correspondingly, urchin consumption rates of untreated macroalgae (Caulerpa racemosa) were not significantly affected by pCO2. In contrast, exposure of urchins to elevated pCO2 significantly reduced the number of correct foraging choices for ambient macroalgae (Dictyota spp.), indicating impairment of urchin chemical sensing under acidification. However, exposure of algae to elevated pCO2 returned the number of correct foraging choices in similarly exposed urchins to ambient levels, suggesting alongside higher C:N ratios that algal nutritional content was altered in a way detectable by the urchins under acidification. These results highlight the importance of studying the indirect effects of acidification on trophic interactions simultaneously with direct effects on physiology. Together, these results suggest that changes to urchin chemical sensing and algal nutritional quality are the driving mechanisms behind surprisingly unaltered urchin foraging behavior for fleshy macroalgae under joint exposure to ocean acidification. Consistent foraging behavior and consumption rates suggest that the trophic interaction between L. variegatus and fleshy macroalgae may be sustained under future acidification. However, increases in fleshy macroalgal biomass driven by opportunistic carbon acquisition strategies have the potential to cause ecological change, depending on how grazer populations respond. Additional field research is needed to determine the outcome of these results over time and under a wider range of environmental conditions.
    Description: This work was supported by Mote Marine Laboratory Postdoctoral Fellowships (RJN and HNP), Becker Internship Funding, and philanthropic funds to ERH.
    Keywords: Climate change ; Elevated pCO2 ; Direct effects ; Physiology ; Indirect effects ; Herbivory
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  • 119
    Publication Date: 2022-05-27
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Kakihata, Y., Michibayashi, K., & Dick, H. Heterogeneity in texture and crystal fabric of intensely hydrated ultramylonitic peridotites along a transform fault, Southwest Indian Ridge. Tectonophysics, 823, (2022): 229206, https://doi.org/10.1016/j.tecto.2021.229206.
    Description: Microstructures and olivine crystal fabrics were studied in amphibole-bearing peridotite samples obtained from the Marion Fracture Zone of the Southwest Indian Ridge by dredge D19 of the 1984 PROTEA Expedition Leg 5 cruise of the RV Melville. The peridotites show various textures ranging from extremely fine-grained well-layered ultramylonites to heterogeneously strained tectonites. Electron back-scatter diffraction analyses revealed that olivine crystal-preferred orientations (CPOs), which are developed primarily in coarse granular peridotites in the mantle, become weaker with an increasing degree of grain-size reduction from coarser to finer grains, for both porphyroclastic and matrix olivine grains. However, two well-layered ultramylonites are characterized by bimodal CPOs of (010)[001] (B type) and (001)[100] (E type) or a strong maximum of [010] normal to the foliation and girdle patterns of both [100] and [001] on the foliation plane (i.e., an axial [010] pattern or AG type). Moreover, spinel grains within these well-layered ultramylonites have not only been broken down to form olivine and amphibole by hydrous reactions, but have also been fractured and their fragments pulled apart in the fine-grained matrix. These features indicate that shear deformation occurred as increasing stress under hydrous conditions during the final stage of deformation, which enabled the local occurrence of low-temperature plastic deformation, resulting in the development of a CPO and a foliation within the ultramylonites.
    Description: This study was supported by research grants awarded to K.M. by the Japan Society for the Promotion of Science (Kiban-A 22244062, Kiban-S 16H06347). H.J.B.D. was supported by the US National Science Foundation (NSF/MG&G) and Woods Hole Oceanographic Institution.
    Keywords: Transform fault ; Mantle ; Peridotite ; Ultramylonite ; Hydrous mineral ; Olivine CPOs
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  • 120
    Publication Date: 2022-05-27
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Johnson, J. E., MacLeod, D. R., Phillips, S. C., Phillips, M. P., & Divins, D. L. Primary deposition and early diagenetic effects on the high saturation accumulation of gas hydrate in a silt dominated reservoir in the Gulf of Mexico. Marine Geology, 444, (2022): 106718, https://doi.org/10.1016/j.margeo.2021.106718.
    Description: On continental margins, high saturation gas hydrate systems (〉60% pore volume) are common in canyon and channel environments within the gas hydrate stability zone, where reservoirs are dominated by coarse-grained, high porosity sand deposits. Recent studies, including the results presented here, suggest that rapidly deposited, silt-dominated channel-levee environments can also host high saturation gas hydrate accumulations. Here we present several sedimentological data sets, including sediment composition, biostratigraphic age from calcareous nannofossils, grain size, total organic carbon (TOC), C/N elemental ratio, δ13C-TOC, CaCO3, total sulfur (TS), and δ34S-TS from sediments collected with pressure cores from a gas hydrate rich, turbidite channel-levee system in the Gulf of Mexico during the 2017 UT-GOM2-1 Hydrate Pressure Coring Expedition. Our results indicate the reservoir is composed of three main lithofacies, which have distinct sediment grain size distributions (type A-silty clay to clayey silt, type B-clayey silt, and type C-sandy silt to silty sand) that are characteristic of variable turbidity current energy regimes within a Pleistocene (〈 0.91 Ma) channel-levee environment. We document that the TOC in the sediments of the reservoir is terrestrial in origin and contained within the fine fraction of each lithofacies, while the CaCO3 fraction is composed of primarily reworked grains, including Cretaceous calcareous nannofossils, and part of the detrital load. The lack of biogenic grains within the finest grained sediment intervals throughout the reservoir suggests interevent hemipelagic sediments are not preserved, resulting in a reservoir sequence of silt dominated, stacked turbidites. We observe two zones of enhanced TS at the top and bottom of the reservoir that correspond with enriched bulk sediment δ34S, indicating stalled or slowly advancing paleo-sulfate-methane transition zone (SMTZ) positions likely driven by relative decreases in sedimentation rate. Despite these two diagenetic zones, the low abundance of diagenetic precipitates throughout the reservoir allowed the primary porosity to remain largely intact, thus better preserving primary porosity for subsequent pore-filling gas hydrate. In canyon, channel, and levee environments, early diagenesis may be regulated via sedimentation rates, where high rates result in rapid progression through the SMTZ and minimal diagenetic mineralization and low rates result in the stalling of the SMTZ, enhancing diagenetic mineralization. Here, we observed some enhanced pyritization to implicate potential sedimentation rate changes, but not enough to consume primary porosity, resulting in a high saturation gas hydrate reservoir. These results emphasize the important implications of sedimentary processes, sedimentation rates, and early diagenesis on the distribution of gas hydrate in marine sediments along continental margins.
    Description: This research and the UT-GOM2-1Hydrate Pressure Coring Expedition was supported by the U.S. Department of Energy (DOE) through Project # DE-FE0023919 “Deepwater Methane Hydrate Characterization and Scientific Assessment”. Graduate Teaching Assistant support and additional research funds for co-author MacLeod were provided through the UNH Dept. of Earth Sciences and the Jonathan W. Herndon Scholarship. Co-author Phillips was supported by funding from the U.S. Geological Survey's Coastal and Marine Hazards and Resources Program and DOE Interagency Agreement89243320SFE000013.
    Keywords: Methane hydrate ; Channel levee ; Turbidites ; Anaerobic oxidation of methane
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  • 121
    Publication Date: 2022-05-27
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Ferrick, A., Wright, V., Manga, M., & Sitar, N. Microstructural differences between naturally-deposited and laboratory beach sands. Granular Matter, 24(1), (2022): 9, https://doi.org/10.1007/s10035-021-01169-4.
    Description: The orientation of, and contacts between, grains of sand reflect the processes that deposit the sands. Grain orientation and contact geometry also influence mechanical properties. Quantifying and understanding sand microstructure thus provide an opportunity to understand depositional processes better and connect microstructure and macroscopic properties. Using x-ray computed microtomography, we compare the microstructure of naturally-deposited beach sands and laboratory sands created by air pluviation in which samples are formed by raining sand grains into a container. We find that naturally-deposited sands have a narrower distribution of coordination number (i.e., the number of grains in contact) and a broader distribution of grain orientations than pluviated sands. The naturally-deposited sand grains orient inclined to the horizontal, and the pluviated sand grains orient horizontally. We explain the microstructural differences between the two different depositional methods by flowing water at beaches that re-positions and reorients grains initially deposited in unstable grain configurations.
    Description: MM is supported by National Science Foundation (No. 1615203). NS is supported by National Science Foundation (No. CMMI-1853056).
    Keywords: Microstructure ; X-ray computed microtomography ; Coordination number ; Pluviation
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  • 122
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Cai, C., Kwon, Y.-O., Chen, Z., & Fratantoni, P. Mixed layer depth climatology over the northeast US continental shelf (1993-2018). Continental Shelf Research, 231, (2021): 104611 https://doi.org/10.1016/j.csr.2021.104611.
    Description: The Northeast U.S. (NEUS) continental shelf has experienced rapid warming in recent decades. Over the NEUS continental shelf, the circulation and annual cycle of heating and cooling lead to local variability of water properties. The mixed layer depth (MLD) is a key factor that determines the amount of upper ocean warming. A detailed description of the MLD, particularly its seasonal cycle and spatial patterns, has not been developed for the NEUS continental shelf. We compute the MLD using an observational dataset from the Northeast Fisheries Science Center hydrographic monitoring program. The MLD exhibits clear seasonal cycles across five eco-regions on the NEUS continental shelf, with maxima in January–March and minima in July or August. The seasonal cycle is largest in the western Gulf of Maine (71.9 ± 24.4 m), and smallest in the southern Mid-Atlantic Bight (34.0 ± 7.3 m). Spatial variations are seasonally dependent, with greatest homogeneity in summer. Interannual variability dominates long-term linear trends in most regions and seasons. To evaluate the sensitivity of our results, we compare the MLDs calculated using a 0.03 kg/m3 density threshold with those using a 0.2 °C temperature threshold. Temperature-based MLDs are generally consistent with density-based MLDs, although a small number of temperature-based MLDs are biased deep compared to density-based MLDs particularly in spring and fall. Finally, we compare observational MLDs to the MLDs from a high-resolution ocean reanalysis GLORYS12V1. While the mean values of GLORYS12V1 MLDs compare well with the observed MLDs, their interannual variability are not highly correlated, particularly in summer. These results can be a starting point for future studies on the drivers of temporal and spatial MLD variability on the NEUS continental shelf.
    Description: The authors gratefully acknowledge the support from the NOAA Modeling, Analysis, Predictions, and Projections (MAPP) Program (NA17OAR4310111) and Climate Variability and Predictability Program (NA20OAR4310482). Cassia Cai acknowledges the Woods Hole Oceanographic Institution Summer Student Fellowship program for participation, the Northwestern University (NU) Earth and Planetary Science Independent Study for supporting the writing of this manuscript, and the NU Climate Change Research Group for providing some of the technical tools to conduct analysis.
    Keywords: Mixed layer depth ; Northeast U.S. continental shelf ; Climatology
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  • 123
    Publication Date: 2022-05-27
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Kouba, A., Oficialdegui, F. J., Cuthbert, R. N., Kourantidou, M., South, J., Tricarico, E., Gozlan, R. E., Courchamp, F., & Haubrock, P. J. Identifying economic costs and knowledge gaps of invasive aquatic crustaceans. Science of the Total Environment, 813, (2022): 152325, https://doi.org/10.1016/j.scitotenv.2021.152325.
    Description: Despite voluminous literature identifying the impacts of invasive species, summaries of monetary costs for some taxonomic groups remain limited. Invasive alien crustaceans often have profound impacts on recipient ecosystems, but there may be great unknowns related to their economic costs. Using the InvaCost database, we quantify and analyse reported costs associated with invasive crustaceans globally across taxonomic, spatial, and temporal descriptors. Specifically, we quantify the costs of prominent aquatic crustaceans — crayfish, crabs, amphipods, and lobsters. Between 2000 and 2020, crayfish caused US$ 120.5 million in reported costs; the vast majority (99%) being attributed to representatives of Astacidae and Cambaridae. Crayfish-related costs were unevenly distributed across countries, with a strong bias towards European economies (US$ 116.4 million; mainly due to the signal crayfish in Sweden), followed by costs reported from North America and Asia. The costs were also largely predicted or extrapolated, and thus not based on empirical observations. Despite these limitations, the costs of invasive crayfish have increased considerably over the past two decades, averaging US$ 5.7 million per year. Invasive crabs have caused costs of US$ 150.2 million since 1960 and the ratios were again uneven (57% in North America and 42% in Europe). Damage-related costs dominated for both crayfish (80%) and crabs (99%), with management costs lacking or even more under-reported. Reported costs for invasive amphipods (US$ 178.8 thousand) and lobsters (US$ 44.6 thousand) were considerably lower, suggesting a lack of effort in reporting costs for these groups or effects that are largely non-monetised. Despite the well-known damage caused by invasive crustaceans, we identify data limitations that prevent a full accounting of the economic costs of these invasive groups, while highlighting the increasing costs at several scales based on the available literature. Further cost reports are needed to better assess the true magnitude of monetary costs caused by invasive aquatic crustaceans.
    Description: This research was enabled thanks to the French National Research Agency (ANR-14-CE02-0021) and the BNP-Paribas Foundation Climate Initiative for funding the InvaCost project that allowed the construction of the InvaCost database. The present work was conducted following a workshop funded by the AXA Research Fund Chair of Invasion Biology and is part of the AlienScenario project funded by BiodivERsA and Belmont-Forum call 2018 on biodiversity scenarios. AK acknowledges the Czech Science Foundation (project no. 19-04431S). FJO is funded by the Regional Government of Andalusia in Spain (Excelencia project P12-RNM-936). RNC acknowledges funding from the Alexander von Humboldt Foundation. JS acknowledges funding from the DSI-NRF Centre of Excellence for Invasion Biology (CIB).
    Keywords: Amphipoda ; Freshwater and marine ecosystems ; Decapoda ; InvaCost ; Invasive alien species ; Invertebrates ; Monetary impact
    Repository Name: Woods Hole Open Access Server
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  • 124
    Publication Date: 2022-05-27
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Aguado, M. T., Ponz-Segrelles, G., Glasby, C. J., Ribeiro, R. P., Nakamura, M., Oguchi, K., Omori, A., Kohtsuka, H., Fisher, C., Ise, Y., Jimi, N., & Miura, T. Ramisyllis kingghidorahi n. Sp., a new branching annelid from Japan. Organisms Diversity & Evolution. (2022), https://doi.org/10.1007/s13127-021-00538-4.
    Description: Among over 20,000 species of Annelida, only two branching species with a highly modified body-pattern are known until now: the Syllidae Syllis ramosa McIntosh, 1879, and Ramisyllis multicaudata Glasby et al. (Zoological Journal of the Linnean Society, 164, 481–497, 2012). Both have unusual ramified bodies with one head and multiple branches and live inside the canals of host sponges. Using an integrative approach (combining morphology, internal anatomy, ecology, phylogeny, genetic divergence, and the complete mitochondrial genome), we describe a new branching species from Japan, Ramisyllis kingghidorahi n. sp., inhabiting an undescribed species of Petrosia (Porifera: Demospongiae) from shallow waters. We compare the new species with its closest relative, R. multicaudata; emend the diagnosis of Ramisyllis; and discuss previous reports of S. ramosa. This study suggests a much higher diversity of branching syllids than currently known. Finally, we discuss possible explanations for the feeding behaviour in the new species in relation to its highly ciliated wall of the digestive tubes (especially at the distal branches and anus), and provide a hypothesis for the evolution of branching body patterns as the result of an adaptation to the host sponge labyrinthic canal system.
    Description: Open Access funding enabled and organized by Projekt DEAL. This study was financed by the Biodiversitätsmuseum (PI:MTA), Georg August University, Göttingen, and by Grant-in Aid for Scientific Research A (No. 18H04006) (PI:TM) from the Ministry of Education, Culture, Sports, Science and Technology of Japan. GP-S was supported by the “Contratos Predoctorales para la Formación de Doctores 2016” program of MINECO, Spain (code: BES-2016–076419), co-financed by the European Social Found. RPR was supported by the program “Contratos predoctorales para Formación de Personal Investigador, FPI-UAM,” Universidad Autónoma de Madrid.
    Keywords: Mitochondrial genome ; Phylogenetics ; Sponge ; Syllidae ; Symbiosis ; Morphology ; Anatomy ; Ecology
    Repository Name: Woods Hole Open Access Server
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  • 125
    Publication Date: 2022-05-27
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Pieterek, B., Ciazela, J., Boulanger, M., Lazarov, M., Wegorzewski, A., Pańczyk, M., Strauss, H., Dick, H. J. B., Muszyński, A., Koepke, J., Kuhn, T., Czupyt, Z., & France, L. Sulfide enrichment along igneous layer boundaries in the lower oceanic crust: IODP Hole U1473A, Atlantis Bank, Southwest Indian Ridge. Geochimica et Cosmochimica Acta, 320, (2022): 179–206, https://doi.org/10.1016/j.gca.2022.01.004.
    Description: Reactive porous or focused melt flows are common in crystal mushes of mid-ocean ridge magma reservoirs. Although they exert significant control on mid-ocean ridge magmatic differentiation, their role in metal transport between the mantle and the ocean floor remains poorly constrained. Here we aim to improve such knowledge for oceanic crust formed at slow-spreading centers (approximately half of present-day oceanic crust), by focusing on specific igneous features where sulfides are concentrated. International Ocean Discovery Program (IODP) Expedition 360 drilled Hole U1473A 789 m into the lower crust of the Atlantis Bank oceanic core complex, located at the Southwest Indian Ridge. Coarse-grained (5–30 mm) olivine gabbro prevailed throughout the hole, ranging locally from fine- (〈1 mm), to very coarse-grained (〉30 mm). We studied three distinct intervals of igneous grain size layering at 109.5–110.8, 158.0–158.3, and 593.0–594.4 meters below seafloor to understand the distribution of sulfides. We found that the layer boundaries between the fine- and coarse-grained gabbro were enriched in sulfides and chalcophile elements. On average, sulfide grains throughout the layering were composed of pyrrhotite (81 vol.%; Fe1-xS), chalcopyrite (16 vol.%; CuFeS2), and pentlandite (3 vol.%; [Ni,Fe,Co]9S8), which reflect paragenesis of magmatic origin. The sulfides were most commonly associated with Fe-Ti oxides (titanomagnetites and ilmenites), amphiboles, and apatites located at the interstitial positions between clinopyroxene, plagioclase, and olivine. Pentlandite exsolution textures in pyrrhotite indicate that the sulfides formed from high-temperature sulfide liquid separated from mafic magma that exsolved upon cooling. The relatively homogenous phase proportion within sulfides along with their chemical and isotopic compositions throughout the studied intervals further support the magmatic origin of sulfide enrichment at the layer boundaries. The studied magmatic layers were likely formed as a result of intrusion of more primitive magma (fine-grained gabbro) into the former crystal mush (coarse-grained gabbro). Sulfides from the coarse-grained gabbros are Ir-Platinum Group Element-rich (PGE; i.e., Ir, Os, Ru) but those from the fine-grained gabbros are Pd-PGE-rich (i.e., Pd, Pt, Rh). Notably, the sulfides from the layer boundaries are also enriched in Pd-PGEs, and therefore elevated sulfide contents at the boundaries were likely related to the new intruding melt. Because S concentration at sulfide saturation level is dependent on the Fe content of the melt, sulfide crystallization may have been caused by FeO loss, both via crystallization of late-precipitating oxides at the boundaries, and by exchange of Fe and Mg between melt and Fe-bearing silicates (olivine and clinopyroxene). The increased precipitation of sulfide grains at the layer boundaries might be widespread in the lower oceanic crust, as also observed in the Semail ophiolite and along the Mid-Atlantic Ridge. Therefore, this process might affect the metal budget of the global lower oceanic crust. We estimate that up to ∼20% of the Cu, ∼8% of the S, and ∼84% of the Pb of the oceanic crust inventory is accumulated at the layer boundaries only from the interaction between crystal mush and new magma.
    Description: This research was funded by National Science Centre Poland (PRELUDIUM 12 no. 2016/23/N/ST10/00288), Graduate Academy of the Leibniz Universität Hannover (60421784), and ECORD Research Grant to J. Ciazela, as well as Deutsche Forschungsgemeinschaft (KO1723/23-1) to J. Koepke and H. Strauss. J. Ciazela is additionally supported within the START program of the Foundation for Polish Science (FNP). This is CRPG contribution No. 2813.
    Keywords: Sulfides ; Chalcophile elements ; Platinum group elements ; Lower oceanic crust ; IODP
    Repository Name: Woods Hole Open Access Server
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  • 126
    Publication Date: 2022-08-04
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Ganju, N. K., Couvillion, B. R., Defne, Z., & Ackerman, K. Development and application of landsat-based wetland vegetation cover and unvegetated-vegetated marsh ratio (UVVR) for the conterminous United States. Estuaries and Coasts, (2022), https://doi.org/10.1007/s12237-022-01081-x.
    Description: Effective management and restoration of salt marshes and other vegetated intertidal habitats require objective and spatially integrated metrics of geomorphic status and vulnerability. The unvegetated-vegetated marsh ratio (UVVR), a recently developed metric, can be used to establish present-day vegetative cover, identify stability thresholds, and quantify vulnerability to open-water conversion over a range of spatial scales. We developed a Landsat-based approach to quantify the within-pixel vegetated fraction and UVVR for coastal wetlands of the conterminous United States, at 30-m resolution for 2014–2018. Here we present the methodology used to generate the UVVR from spectral indices, along with calibration, validation, and spatial autocorrelation assessments. We then demonstrate multiple applications of the data across varying spatial scales: first, we aggregate the UVVR across individual states and estuaries to quantify total vegetated wetland area for the nation. On the state level, Louisiana and Florida account for over 50% of the nation’s total, while on the estuarine level, the Chesapeake Bay Estuary and selected Louisiana coastal areas each account for over 6% of the nation’s total vegetated wetland area. Second, we present cases where this dataset can be used to track wetland change (e.g., expansion due to restoration and loss due to stressors). Lastly, we propose a classification methodology that delineates areas vulnerable to open-water expansion based on the 5-year mean and standard deviation of the UVVR. Calculating the UVVR for the period-of-record back to 1985, as well as regular updating, will fill a critical gap for tracking national status of salt marshes and other vegetated habitats through time and space.
    Description: This work was supported by the U.S. Geological Survey’s Coastal and Marine Hazards/Resources Program.
    Keywords: Remote-sensing ; Salt marshes ; Tidal wetlands ; Vulnerability ; Geomorphology
    Repository Name: Woods Hole Open Access Server
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  • 127
    Publication Date: 2022-09-26
    Description: Processing remains of brown shrimp, Crangon crangon, account for up to 60 % of the catch while only the small muscle fraction is used for human consumption. Incorporation into aquafeeds for high-valued species would reduce waste, create by-product value and promote sustainable aquaculture development. A detailed chemical characterisation of the remains from mechanically peeled brown shrimp was made and apparent nutrient digestibility coefficients in Litopenaeus vannamei were investigated. Brown shrimp processing remains (BSPR) contain substantial amounts of key nutrients (521 g⋅kg-1 crude protein, 74 g⋅kg-1 total lipid, 15 MJ⋅kg-1 gross energy) and valuable functional ingredients were detected (cholesterol, astaxanthin). Apparent energy (82 %) and protein (86 %) digestibility coefficients reveal good bioavailability of these nutrients. Dry matter digestibility was lower (64 %) presumably due to the high ash content (244 g⋅kg-1). The amino acid profile meets dietary requirements of penaeid shrimp with high apparent lysine and methionine digestibility coefficients. Analysis of macro- and micro minerals showed reasonable levels of required dietary minerals (phosphorus, magnesium, copper, manganese, selenium, zinc) and apparent copper digestibility was high (93 %). Contamination levels present in BSPR were below European standards acceptable for human consumption. Processing remains of brown shrimp have a high potential as alternative feed ingredient in sustainable diets for L. vannamei in recirculating aquaculture systems.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 128
    Publication Date: 2022-09-27
    Description: Little research attention has been given to validating clusters obtained from the groundwater geochemistry of the waterworks' capture zone with a prevailing lake‐groundwater exchange. To address this knowledge gap, we proposed a new scheme whereby Gaussian finite mixture modeling (GFMM) and Spike‐and‐Slab Bayesian (SSB) algorithms were utilized to cluster the groundwater geochemistry while quantifying the probability of the resulting cluster membership against each other. We applied GFMM and SSB to 13 geochemical parameters collected during different sampling periods at 13 observation points across the Barnim Highlands plateau located in the northeast of Berlin, Germany; this included 10 observation wells, two lakes, and a gallery of drinking production wells. The cluster analysis of GFMM yielded nine clusters, either with a probability ≥0.8, while the SSB produced three hierarchical clusters with a probability of cluster membership varying from 〈0.2 to 〉0.8. The findings demonstrated that the clustering results of GFMM were in good agreement with the classification as per the principal component analysis and Piper diagram. By superimposing the parameter clustering onto the observation clustering, we could identify discrepancies that exist among the parameters of a certain cluster. This enables the identification of different factors that may control the geochemistry of a certain cluster, although parameters of that cluster share a strong similarity. The GFMM results have shown that from 2002, there has been active groundwater inflow from the lakes towards the capture zone. This means that it is necessary to adopt appropriate measures to reverse the inflow towards the lakes.
    Description: Article impact statement: The probability of cluster membership quantified using an algorithm should be validated against another probabilistic‐based classifier.
    Description: Federal Ministry of Education and Research http://dx.doi.org/10.13039/501100002347
    Keywords: ddc:551.9 ; ddc:551.49
    Language: English
    Type: doc-type:article
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  • 129
    Publication Date: 2022-10-01
    Description: Copper (Cu) is an essential element for plants and microorganisms and at larger concentrations a toxic pollutant. A number of factors controlling Cu dynamics have been reported, but information on quantitative relationships is scarce. We aimed to (i) quantitatively describe and predict soil Cu concentrations (CuAR) in aqua regia considering site‐specific effects and effects of pH, soil organic carbon (SOC) and cation exchange capacity (CEC), and (ii) study the suitability of mixed‐effects modelling and rule‐based models for the analysis of long‐term soil monitoring data. Thirteen uncontaminated long‐term monitoring soil profiles in southern Germany were analysed. Since there was no measurable trend of increasing CuAR concentrations with time in the respective depth ranges of the sites, data from different sampling dates were combined and horizon‐specific regression analyses including model simplifications were carried out for 10 horizons. Fixed‐ and mixed‐effects models with the site as a random effect were useful for the different horizons and significant contributions (either of main effects or interactions) of SOC, CEC and pH were present for 9, 8 and 7 horizons, respectively. Horizon‐specific rule‐based cubist models described the CuAR data similarly well. Validations of cubist models and mixed‐effects models for the CuAR concentrations in A horizons were successful for the given population after random splitting into calibration and validation samples, but not after independent validations with random splitting according to sites. Overall, site, CEC, SOC and pH provide important information for a description of CuAR concentrations using the different regression approaches. Highlights: Information on quantitative relationships for factors controlling Cu dynamics is scarce. Site, CEC, SOC and pH provide important information for a description of Cu concentrations. Validations of cubist models and mixed‐effects models for A horizons were successful for a closed population of sites.
    Description: Bavarian State Ministry of the Environment and Consumer Protection http://dx.doi.org/10.13039/501100010219
    Description: Ministry of Agriculture and Environment Mecklenburg‐Western Pomerania
    Keywords: ddc:631.4
    Language: English
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  • 130
    Publication Date: 2022-10-04
    Description: Soil aeration is a critical factor for oxygen‐limited subsoil processes, as transport by diffusion and advection is restricted by the long distance to the free atmosphere. Oxygen transport into the soil matrix is highly dependent on its connectivity to larger pore channels like earthworm and root colonised biopores. Here we hypothesize that the soil matrix around biopores represents different connectivity depending on biopore genesis and actual coloniser. We analysed the soil pore system of undisturbed soil core samples around biopores generated or colonised by roots and earthworms and compared them with the pore system of soil, not in the immediacy of a biopore. Oxygen partial pressure profiles and gas relative diffusion was measured in the rhizosphere and drilosphere from the biopore wall into the bulk soil with microelectrodes. The measurements were linked with structural features such as porosity and connectivity obtained from X‐ray tomography and image analysis. Aeration was enhanced in the soil matrix surrounding biopores in comparison to the bulk soil, shown by higher oxygen concentrations and higher relative diffusion coefficients. Biopores colonised by roots presented more connected lateral pores than earthworm colonised ones, which resulted in enhanced aeration of the rhizosphere compared to the drilosphere. This has influenced biotic processes (microbial turnover/mineralization or root respiration) at biopore interfaces and highlights the importance of microstructural features for soil processes and their dependency on the biopore's coloniser.
    Description: Deutsche Forschungsgemeinschaft http://dx.doi.org/10.13039/501100001659
    Keywords: ddc:631.4
    Language: English
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  • 131
    Publication Date: 2022-10-04
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Sandin, S. A., Alcantar, E., Clark, R., de Leon, R., Dilrosun, F., Edwards, C. B., Estep, A. J., Eynaud, Y., French, B. J., Fox, M. D., Grenda, D., Hamilton, S. L., Kramp, H., Marhaver, K. L., Miller, S. D., Roach, T. N. F., Seferina, G., Silveira, C. B., Smith, J. E., Zgliczynski, B. J., & Vermeij, M. J. A. Benthic assemblages are more predictable than fish assemblages at an island scale. Coral Reefs, 41, (2022.): 1031–1043, https://doi.org/10.1007/s00338-022-02272-5.
    Description: Decades of research have revealed relationships between the abundance of coral reef taxa and local conditions, especially at small scales. However, a rigorous test of covariation requires a robust dataset collected across wide environmental or experimental gradients. Here, we surveyed spatial variability in the densities of major coral reef functional groups at 122 sites along a 70 km expanse of the leeward, forereef habitat of Curaçao in the southern Caribbean. These data were used to test the degree to which spatial variability in community composition could be predicted based on assumed functional relationships and site-specific anthropogenic, physical, and ecological conditions. In general, models revealed less power to describe the spatial variability of fish biomass than cover of reef builders (R2 of best-fit models: 0.25 [fish] and 0.64 [reef builders]). The variability in total benthic cover of reef builders was best described by physical (wave exposure and reef relief) and ecological (turf algal height and coral recruit density) predictors. No metric of anthropogenic pressure was related to spatial variation in reef builder cover. In contrast, total fish biomass showed a consistent (albeit weak) association with anthropogenic predictors (fishing and diving pressure). As is typical of most environmental gradients, the spatial patterns of both fish biomass density and reef builder cover were spatially autocorrelated. Residuals from the best-fit model for fish biomass retained a signature of spatial autocorrelation while the best-fit model for reef builder cover removed spatial autocorrelation, thus reinforcing our finding that environmental predictors were better able to describe the spatial variability of reef builders than that of fish biomass. As we seek to understand spatial variability of coral reef communities at the scale of most management units (i.e., at kilometer- to island-scales), distinct and scale-dependent perspectives will be needed when considering different functional groups.
    Description: This research and the larger efforts of Blue Halo Curacao were supported by funding from the Waitt Institute and with permissions from the Government of Curacao, Ministry of Health, Environment, and Nature. Field logistics were further supported by the Waitt Institute vessel crew, CARMABI Foundation, The Dive Shop Curacao, and Dive Charter Curacao.
    Keywords: Community ecology ; Oceanography ; Anthropogenic impacts ; Spatial variation ; Spatial autocorrelation
    Repository Name: Woods Hole Open Access Server
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  • 132
    Publication Date: 2022-08-16
    Description: Geoheritage and geodiversity visually and symbolically express the link between the physical and biological environment and cultural world. In the geoethical vision, their protection is fundamental, since they are irreplaceable components of a non-renewable social and natural ‘capital’. They become points of reference to redefine the intimate connection between human beings and Earth, thus assuming a value meaning to be placed at the basis of a new way of experiencing the territory. Initiatives such as geoparks or geotourism represent their concrete implementation, as activities capable of enhancing the environment and its geological landscape. Furthermore, their learning and enjoyment also foster a broader understanding of the significance of geosciences and their importance for the functioning of societies, as well as promoting interactions with local human communities, and the expansion of one’s spiritual and aesthetical dimension while living the interaction with nature. Responsible geotourism enhances sites and landscapes of geological significance, assuring their protection and the sustainable development of surrounding areas. Moreover, the use of those sites by citizens can increase their awareness and understanding of key issues to be faced by society, such as the sustainable use of geo-resources, the mitigation of and adaptation to climate change effects, and the reduction of risks related to natural and anthropogenic phenomena. Geotourism, therefore, also represents the common ground on which geosciences and social sciences can interact, offering undoubted advantages. It makes multidisciplinary and interdisciplinary work and cross-boundaries national and international collaboration visual and tangible; it produces an increase in public awareness and scientific knowledge; it improves the quality of life of the local population by creating incentives for economic development; finally, it drives society to behave and act more responsibly towards geodiversity and biodiversity. This chapter frames geotourism within geoethical thought, emphasising its formative contribution for the human being.
    Description: Submitted
    Description: 1TM. Formazione
    Description: 2TM. Divulgazione Scientifica
    Description: 3TM. Comunicazione
    Keywords: geoethics ; geotourism ; geoparks ; responsibility ; sustainability ; 05.03. Educational, History of Science, Public Issues ; 05.09. Miscellaneous
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: book chapter
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  • 133
    Publication Date: 2022-08-23
    Description: This paper presents a comprehensive geological and geotechnical study of the whole area affected by liquefaction following the 2012 Emilia earthquakes, including all the available information from the field reconnaissance surveys, in situ tests, and laboratory analyses. The compilation was performed at 120 liquefied sites to verify and validate the reliability of liquefaction charts in alluvial sediments, and to assess liquefaction induced by the 2012 seismic sequence in the Emilia plain. The results reveal a wide range of grain sizes (from clean sands to sandy silts) and compositional characteristics (quartz-rich to litharenitic) in the 2012 ejecta, and show a strong relationship between the liquefaction and stratigraphic architecture of the subsurface. The availability of in situ tests at the liquefied sites makes it possible to verify and validate the reliability of the liquefaction charts in alluvial sediments with respect to the real observations. For the analyzed Emilia case studies, the use of non-liquefiable crust provides better estimations of the liquefaction manifestations when coupled with the thickness of the liquefiable layer rather than with the liquefaction potential index. Altogether, this work makes available to the international scientific community a consistent liquefaction database for in-depth earthquake studies
    Description: Published
    Description: 3659–3697
    Description: 5T. Sismologia, geofisica e geologia per l'ingegneria sismica
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 134
    Publication Date: 2022-08-26
    Description: Reconstruction of geomagnetic field changes has a strong potential to complement geodynamo modeling and improve the understanding of Earth’s core dynamics. Recent works based on geomagnetic measure-ments pointed out that over the last two decades the position of the north magnetic pole has been largely determined by the influence of two competing flux lobes under Canada and Siberia. In order to understand if the waxing and waning of magnetic flux lobes have driven the path of geo-magnetic paleopoles in the past, we present an augmented and updated record of the chronology and paleosecular variation of geomagnetic field for the last 22 kyr derived from sedimentary cores collected along the north-western margin of Barents Sea and western margin of Spitsbergen (Arctic). The path of the virtual geomagnetic pole (VGP) has been reconstructed over this time period and compared with the maps of the radial component of the geomagnetic field at the core-mantle boundary, obtained from the most recent models. The VGP path includes centuries during which the VGP position is stable and cen-turies during which its motion accelerates. We recognize both clockwise and counterclockwise VGP paths, mostly developing inside the surface projection of the inner core tangent cylinder in the Arctic region. The VGP path seems to follow the appearance of Brpatches of normal magnetic flux, especially those located under Siberia and Canada areas, but also those that may cause peculiar paleomagnetic features such as the Levantine Iron Age Anomaly.
    Description: Published
    Description: 117762
    Description: 1A. Geomagnetismo e Paleomagnetismo
    Description: 5A. Ricerche polari e paleoclima
    Description: JCR Journal
    Keywords: geomagnetic paleosecular variation ; relative paleointensit ; flux lobes ; Levantine Iron Age Anomaly ; marine sediment cores ; arctic region ; solid earth ; paleomagnetism
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 135
    Publication Date: 2022-08-30
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , NonPeerReviewed
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  • 136
    Publication Date: 2022-08-19
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Zitterbart, D., Bocconcelli, A., Ochs, M., & Bonnel, J. TOSSIT: a low-cost, hand deployable, rope-less and acoustically silent mooring for underwater passive acoustic monitoring. HardwareX, 11, (2022): e00304, https://doi.org/10.1016/j.ohx.2022.e00304.
    Description: Passive Acoustic Monitoring (PAM) has been used to study the ocean for decades across several fields to answer biological, geological and meteorological questions such as marine mammal presence, measures of anthropogenic noise in the ocean, and monitoring and prediction of underwater earthquakes and tsunamis. While in previous decades the high cost of acoustic instruments limited its use, miniaturization and microprocessor advances dramatically reduced the cost for passive acoustic monitoring instruments making PAM available for a broad scientific community. Such low-cost devices are often deployed by divers or on mooring lines with a surface buoy, which limit their use to diving depth and coastal regions. Here, we present a low-cost, low self-noise and hand-deployable PAM mooring design, called TOSSIT. It can be used in water as deep as 500 m, and can be deployed and recovered by hand by a single operator (more comfortably with two) in a small boat. The TOSSIT modular mooring system consists of a light and strong non-metallic frame that can fit a variety of sensors including PAM instruments, acoustic releases, additional power packages, environmental parameter sensors. The TOSSIT’s design is rope-less, which removes any risk of entanglement and keeps the self-noise very low.
    Description: The development of the TOSSIT mooring was supported by a Woods Hole Oceanographic institution Innovative Technology Award (Award number 25226). TOSSIT deployment in Argentina was supported by a Woods Hole Oceanographic Institution Mary Sears visitor award (Award number 24700) and TOSSIT deployments during SBCEX were funded by the Office of Naval Research Task Force Ocean (ONR TFO, Award number: N000141912627). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
    Keywords: Ocean ambient noise ; Mooring systems ; Soundscape ; Underwater sound ; Bioacoustics ; Oceanography ; Acoustical Oceanography
    Repository Name: Woods Hole Open Access Server
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  • 137
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    Springer
    In:  EPIC3Berlin, Springer, 120 p., ISBN: 978-3-662-64812-4
    Publication Date: 2022-08-29
    Description: Erklärt, wie eine Pandemie modelliert wird. Erläutert, welche Probleme sich mit Modellen lösen lassen und wo die Grenzen liegen. Bietet Orientierung in der Unübersichtlichkeit der Corona-Situation. Die COVID-19-Pandemie hat weltweit dramatische Folgen. Mathematische Modelle spielen bei ihrer Bewertung eine zentrale Rolle: Sie sollen die Wirkung von Maßnahmen abschätzen, die oft mit Einschränkungen individueller Freiheiten einhergehen. Umso mehr sollte das Wissen um die Mathematik der Pandemie nicht nur Experten überlassen bleiben. Dieses Buch erläutert grundlegende Begriffe und Modelle, und klärt weitverbreitete Missverständnisse auf. Das Buch gibt insbesondere Antwort auf folgende Fragen: Was sagen Kennzahlen wie Inzidenz, Reproduktionszahl, Hospitalisierungsrate oder Impfquote über die Pandemie? Was ist der Unterschied von linearem und exponentiellem Wachstum? Was ist Herdenimmunität? Warum werden sich trotz Herdenimmunität fast alle Ungeimpften anstecken? Was ist der Effekt von Kontaktbeschränkungen und Impfung? Warum sind Vorhersagen in der Pandemie schwierig?
    Repository Name: EPIC Alfred Wegener Institut
    Type: Book , NonPeerReviewed
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  • 138
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    Springer
    In:  EPIC3Risiken, Krisen, Konflikte, Springer VS, Wiesbaden, Springer, 18 p., pp. 237-255, ISBN: 978-3-658-36194-5
    Publication Date: 2022-08-29
    Description: Renate Treffeisen und Klaus Grosfeld zeigen in ihren Beitrag, vor welchen Herausforderungen es beim Thema „Kimawandel“ aus dem Blickwinkel der Wissenschaftskommunikation geht. Sie appellieren zunächst dafür, statt von „Klimawandel" von „Klimakrise“ zu sprechen, damit der Blick auf Ursache, Dringlichkeit und den politischen Charakter des Problems in den Vordergrund tritt. Die Fridays4Future- und Scientists4Future-Bewegungen stünden dabei für ein Bottom-Up-Agenda-Setting, das Akteure zu Interaktion und Dialogbereitschaft auffordere. Treffeisen und Grosfeld erläutern daraufhin zwei Medienprojekte für erfolgreichen Wissenstransfer aus dem Forschungsverbund REKLIM.
    Repository Name: EPIC Alfred Wegener Institut
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  • 139
    Publication Date: 2022-06-07
    Description: We present the results of an experiment taking place inside the geophysical museum of Rocca di Papa (Rome, Italy), where the high radon levels detected might pose a risk to the health of workers and of the public audience. As a first step towards the mitigation of potential exposure risk, four active sensors were installed at different floors of the building, in order to continuously monitor not only radon exhalation from the soil but also its transport from the ground up to elevated floors. Collecting more than three years of data of radon concentration enables us to identify fluctuations over both short and seasonal scales and to elucidate the relation between radon variations and changes of internal temperature and relative humidity. The analysis of such dataset reveals how the healthiness of indoor environments in terms of radon concentration is controlled by a number of factors, including the environmental conditions and the use of heating and ventilation systems. Finally, the continuous radon monitoring at different levels of the building provides a unique chance to trace the vertical radon diffusion, allowing to make a first-order estimate of upward radon velocity.
    Description: Published
    Description: 106919
    Description: 7A. Geofisica per il monitoraggio ambientale
    Description: JCR Journal
    Keywords: indoor radon, gas diffusion ; 05.01. Computational geophysics
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 140
    Publication Date: 2022-06-06
    Description: Carbon captured and stored in sediments and soils from vegetated tidal wetlands (mangroves, saltmarshes, freshwater and brackish marshes), where the rates of organic carbon accumulation (OC) from multiple sources is high, constitutes an active fraction of the global carbon sink (Wang et al., 2021). However, a global inventory of this coastal ‘blue carbon’ remains a challenge, as observations of accumulation rates and stock in vegetated tidal wetlands are labor intensive, expensive, scarce, and unevenly distributed, with few sediment records even for relatively well-studied temperate areas in the Northern Hemisphere (Beaumont et al., 2014). Recent reviews (Duarte et al., 2005, Wilkinson et al., 2018) report a mean carbon accumulation rate of 151 g C m yr for saltmarshes (maximum 1720 g C m yr), 41.4 g C m yr for lagoons (maximum 340 g C m yr), and 62.9 g C m yr for coastal wetlands (maximum 335.8 g C m yr) exceeding the mean burial rate of estuaries and continental shelves (17–45 g C m yr ). The accumulation of ‘blue carbon’ stored in soil and sediments within tidal wetlands, is sensitive to rapidly changing climate factors (e.g. temperature, rainfall, sea level rise, and inundation frequency), and non-climatic anthropogenic drivers (e.g. subsidence from groundwater extraction, reduction of sediment supply due to river damming, and land use change) (Pendleton et al., 2012, Macreadie et al., 2013, Arriola, 2017, Kelleway et al., 2017, Simpson et al., 2017, Ewers Lewis et al., 2018, Ruiz-Fernández et al., 2018, Cuellar-martinez et al., 2019, Macreadie and Saintilan, 2019, Negandhi et al., 2019, Rogers et al., 2019). Fast rates of relative sea level rise (RSLR) and low sediment supply are the main drivers of vertical drowning in tidal wetlands (Mariotti and Carr, 2014, Fagherazzi et al., 2020). A global review suggests that between 60 and 91% of saltmarshes will be drawing under the IPPC predicted rates of sea-level rise (Crosby et al., 2016). Carbon stable isotopic composition ( C) and C/N analysis have been used as tracers to distinguish between OC derived from autochthonous C3 and C4 saltmarsh vascular vegetation (i.e. coastal blue carbon; C 12‰ to −30‰, C/N 5.80 to 41.10; Khan et al., 2015b), and allochthonous sources including fluvial and marine particulate organic matter (POM) derived from freshwater or marine phytoplankton (C 12‰ to −30‰, C/N 5 to 9; Lamb et al., 2006), as well as past sea level indicators in coastal vegetated​ habitats in North West Europe (Wilson, 2017). Data on the spatial and historical changes of OC sources and accumulation coupled with long-term time series of climatic factors are limited for vegetated tidal wetlands in the Mediterranean, which make it hard to assess the response of OC accumulation to relative sea-level rise (RSLR) in this region. Sea level observations from satellite altimetry showed an increase in absolute sea level of 2.6 ± 0.28 mm yr across the Mediterranean Sea during the period 1993–2015, and low-lying coastal areas will be prone to marine flooding according to projections for the 21st century (Moatti and Thiébault, 2016). To better understand the spatial and temporal changes in OC accumulation and sources and assess the influence of SST and RSLR, we measured the stable isotopic composition ( C) and accretion rates in sediment records, applied the MixSIAR model to estimate the OC sources, and analyzed Sea Surface Temperature (SST) and Sea Level (SL) climatic data sets in two different tidal wetland habitats: (i) an impacted habitat affected by strong landscape and anthropogenic alterations, and (ii) an undegraded saltmarsh habitat, within a coastal lagoon (Pialassa Baiona) located in the northwestern Adriatic Sea (Mediterranean Sea).
    Description: Published
    Description: 102439
    Description: 4A. Oceanografia e clima
    Description: JCR Journal
    Keywords: Sediments Organic carbon Carbon isotope ratio Mixing models Sea level changes Mediterranean Sea ; 03.02. Hydrology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 141
    Publication Date: 2022-06-22
    Description: This paper reviews current knowledge about the Earth’s core and the overlying deep mantle in terms of structure, chemical and mineralogical compositions, physical properties, and dynamics, using information from seismology, geophysics, and geochemistry. Highpressure experimental techniques that can help to interpret and understand observations of these properties and compositions in the deep interior are summarized. The paper also examines the consequences of core flows on global observations such as variations in Earth’s rotation and orientation or variations in the Earth’s magnetic field. Processes currently active at the core-mantle boundary and the various coupling mechanisms between the core and the mantle are discussed, together with some evidence from magnetic field observations.
    Description: Published
    Description: 263–302
    Description: 1A. Geomagnetismo e Paleomagnetismo
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 142
    Publication Date: 2022-07-11
    Description: An evaluation of the feasible development of geothermal energy in Mozambique is proposed based on some thermal springs geochemical characterization in the Tete region. Chemical and isotopic data suggest that the springs have a meteoric origin and do not show connection with any active magmatic system. The proposed circulation model suggests high depths infiltration of meteoric waters along faults and fractures in a system characterised by discrete permeability and reservoir temperature between 90 and 120 °C. These results, jointly with low salinity fluids and corrosive components absence suggest that the geothermal system may be conveniently exploited for direct and indirect uses.
    Description: Published
    Description: 2
    Description: 1TR. Georisorse
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 143
    Publication Date: 2022-09-14
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in van Haren, H., Voet, G., Alford, M., & Torres, D. Internal wave breaking near the foot of a steep East-Pacific continental slope. Progress In Oceanography, 205, (2022): 102817, https://doi.org/10.1016/j.pocean.2022.102817.
    Description: The sloping sides of ocean basins are of particular interest for their potential importance for considerable turbulence generation via internal wave breaking and associated water circulation. The difference with the ocean interior may be manifest in a 10–100 m relatively thin layer above the seafloor. We set up an observational study with high-resolution stand-alone instrumentation attached to a custom-made release-anchor frame sampling to within 0.5 m from the seafloor up to 150 m above it. For two months, the taut wire moored instrumentation was tested in 1100 m water depth of the East-Pacific, off the coast of San Diego (CA, USA). The mooring was oceanward of an underwater bank and near the foot of its steep but gentle two-dimensional slope. Temperature sensor data demonstrate that internal waves peak at semidiurnal frequencies. While short (〈1 h) periods show complicated structure, tidally averaged turbulence dissipation rate monotonically increases towards the seafloor over two orders of magnitude. The largest turbulence dissipation rates are observed during the relatively warm phase of an internal wave. Although the local topographic slope is supercritical for semidiurnal internal waves, turbulent bores propagating up the slope and hydraulic jumps are not observed. Most of the turbulence appears to be dominated by shear production, but not related to steady frictional flow near the seafloor.
    Description: This work has been partially funded from NSF-grant OCE-1756264.
    Keywords: Pacific Ocean ; Sloping topography ; High-resolution instrumentation ; Internal wave breaking ; High turbulence intensity near seafloor
    Repository Name: Woods Hole Open Access Server
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  • 144
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    In:  EPIC3World Atlas of Submarine Gas Hydrates in Continental Margins, World Atlas of Submarine Gas Hydrates in Continental Margins, Springer, 514 p., pp. 263-273
    Publication Date: 2022-09-04
    Description: The glaciated Greenland continental margins contain favorable conditions for hydrate formation if gas is present. No gas hydrates have been encountered in the drilling of offshore wells, however, and only a limited focus has been placed on academic-led hydrate research to date. Nevertheless, analyses of 2D and 3D seismic reflection data have revealed the occurrence of BSRs, DHIs, chimneys and pockmarks. These seismic features all suggest the presence of gas and gas hydrates within three different sections of the Greenland margin. Seismic amplitude observations in Melville Bay, offshore northwest Greenland, indicate the existence of a *220 m thick gas hydrate deposit over a 50 m high gas column. It is suggested that the paleo-topography of the area has forced the migration of fluid into the overlying stratigraphy. In the Disco area, offshore central West Greenland, seismic observations together with heatflow measurements and sediment core samples suggest that gas and gas hydrates exist in regions with sub-cropping Cretaceous to Paleocene strata and in areas covered by thick postglacial sediments. Finally, 2D seismic reflection data indicate gas and gas hydrate deposits of potentially abiotic origin within the northeast Greenland margin and Molloy Basin, adjacent to the ocean spreading systems in the Fram Strait.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Inbook , NonPeerReviewed
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  • 145
    Publication Date: 2022-09-01
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Walker, S. E., & Echeverri, K. Spinal cord regeneration—the origins of progenitor cells for functional rebuilding. Current Opinion in Genetics & Development, 75, (2022):101917, https://doi.org/10.1016/j.gde.2022.101917.
    Description: The spinal cord is one of the most important structures for all vertebrate animals as it connects almost all parts of the body to the brain. Injury to the mammalian spinal cord has devastating consequences, resulting in paralysis with little to no hope of recovery. In contrast, other vertebrate animals have been known for centuries to be capable of functionally regenerating large lesions in the spinal cord. Here, we will review the current knowledge of spinal cord regeneration and recent work in different proregenerative animals that has begun to shed light on the cellular and molecular mechanisms these animals use to direct cells to rebuild a complex, functional spinal cord.
    Description: KE is supported by a grant from The Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD) R01 HD092451, start-up funds from the Marine Biological Laboratory (MBL), and funding from the Owens Family Foundation.
    Repository Name: Woods Hole Open Access Server
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  • 146
    Publication Date: 2022-09-01
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Yang, X., Zhu, Z., Qiu, S., Kroeger, K. D., Zhu, Z., & Covington, S. Detection and characterization of coastal tidal wetland change in the northeastern US using Landsat time series. Remote Sensing of Environment, 276, (2022): 113047, https://doi.org/10.1016/j.rse.2022.113047.
    Description: Coastal tidal wetlands are highly altered ecosystems exposed to substantial risk due to widespread and frequent land-use change coupled with sea-level rise, leading to disrupted hydrologic and ecologic functions and ultimately, significant reduction in climate resiliency. Knowing where and when the changes have occurred, and the nature of those changes, is important for coastal communities and natural resource management. Large-scale mapping of coastal tidal wetland changes is extremely difficult due to their inherent dynamic nature. To bridge this gap, we developed an automated algorithm for DEtection and Characterization of cOastal tiDal wEtlands change (DECODE) using dense Landsat time series. DECODE consists of three elements, including spectral break detection, land cover classification and change characterization. DECODE assembles all available Landsat observations and introduces a water level regressor for each pixel to flag the spectral breaks and estimate harmonic time-series models for the divided temporal segments. Each temporal segment is classified (e.g., vegetated wetlands, open water, and others – including unvegetated areas and uplands) based on the phenological characteristics and the synthetic surface reflectance values calculated from the harmonic model coefficients, as well as a generic rule-based classification system. This harmonic model-based approach has the advantage of not needing the acquisition of satellite images at optimal conditions (i.e., low tide status) to avoid underestimating coastal vegetation caused by the tidal fluctuation. At the same time, DECODE can also characterize different kinds of changes including land cover change and condition change (i.e., land cover modification without conversion). We used DECODE to track status of coastal tidal wetlands in the northeastern United States from 1986 to 2020. The overall accuracy of land cover classification and change detection is approximately 95.8% and 99.8%, respectively. The vegetated wetlands and open water were mapped with user's accuracy of 94.6% and 99.0%, and producer's accuracy of 98.1% and 93.5%, respectively. The cover change and condition change were mapped with user's accuracy of 68.0% and 80.0%, and producer's accuracy of 80.5% and 97.1%, respectively. Approximately 3283 km2 of the coastal landscape within our study area in the northeastern United States changed at least once (12% of the study area), and condition changes were the dominant change type (84.3%). Vegetated coastal tidal wetland decreased consistently (~2.6 km2 per year) in the past 35 years, largely due to conversion to open water in the context of sea-level rise.
    Description: This study was supported by USGS North Atlantic Coast Cooperative Ecosystem Studies Unit (CESU) Program for Detection and Characterization of Coastal Tidal Wetland Change (G19AC00354).
    Keywords: Coastal tidal wetland ; Landsat time series ; Change detection ; Classification ; Condition change ; Cover change ; Tide ; DECODE
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  • 147
    Publication Date: 2022-06-10
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Sigler, W. A., Ewing, S. A., Wankel, S. D., Jones, C. A., Leuthold, S., Brookshire, E. N. J., & Payn, R. A. Isotopic signals in an agricultural watershed suggest denitrification is locally intensive in riparian areas but extensive in upland soils. Biogeochemistry, 158, (2022): 251–268, https://doi.org/10.1007/s10533-022-00898-9.
    Description: Nitrogen loss from cultivated soils threatens the economic and environmental sustainability of agriculture. Nitrate (NO3−) derived from nitrification of nitrogen fertilizer and ammonified soil organic nitrogen may be lost from soils via denitrification, producing dinitrogen gas (N2) or the greenhouse gas nitrous oxide (N2O). Nitrate that accumulates in soils is also subject to leaching loss, which can degrade water quality and make NO3− available for downstream denitrification. Here we use patterns in the isotopic composition of NO3− observed from 2012 to 2017 to characterize N loss to denitrification within soils, groundwater, and stream riparian corridors of a non-irrigated agroecosystem in the northern Great Plains (Judith River Watershed, Montana, USA). We find evidence for denitrification across these domains, expressed as a positive linear relationship between δ15N and δ18O values of NO3−, as well as increasing δ15N values with decreasing NO3− concentration. In soils, isotopic evidence of denitrification was present during fallow periods (no crop growing), despite net accumulation of NO3− from the nitrification of ammonified soil organic nitrogen. We combine previous results for soil NO3− mass balance with δ15N mass balance to estimate denitrification rates in soil relative to groundwater and streams. Substantial denitrification from soils during fallow periods may be masked by nitrification of ammonified soil organic nitrogen, representing a hidden loss of soil organic nitrogen and an under-quantified flux of N to the atmosphere. Globally, cultivated land spends ca. 50% of time in a fallow condition; denitrification in fallow soils may be an overlooked but globally significant source of agricultural N2O emissions, which must be reduced along-side other emissions to meet Paris Agreement goals for slowing global temperature increase.
    Description: National Institute of Food and Agriculture, 2011–51130-31121, S. A. Ewing, 2011, S. A. Ewing, 2016–67026-25067, S. A. Ewing, Montana State University Extension, Montana Fertilizer Advisory Committee, Montana Agricultural Experiment Station, Montana State University Vice President of Research, Montana State University College of Agriculture, Montana Institute on Ecosystems, NSF EPSCoR, OIA-1757351, S. A. Ewing, OIA-1443108, S. A. Ewing, EPS-110134, S. A. Ewing.
    Keywords: Nitrogen ; Agriculture ; Soil ; Water ; Leaching ; Fallow
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  • 148
    Publication Date: 2022-06-19
    Description: Multiple initiatives have called for large-scale representative networks of marine protected areas (MPAs). MPAs should be ecologically representative to be effective, but in large, remote regions this can be difficult to quantify and assess. We present a novel bioregionalization for the Southern Ocean, which uses the modelled circumpolar habitat importance of 17 marine bird and mammal species. The habitat-use of these predators indicates biodiversity patterns that require representation in Southern Ocean conservation and management planning. In the predator habitat importance predictions, we identified 17 statistical clusters, falling into four larger groups. We characterized and contrasted these clusters based on their predator, prey and oceanographic characteristics. Under the existing Southern Ocean MPA network, some clusters fall short of 10 % representation, yet others meet or exceed these targets. Implementation of currently proposed MPAs can in some cases contribute to meeting even 30 % spatial coverage conservation targets. However, the effectiveness of mixed-use versus no-take MPAs should be taken into consideration, since some clusters are not adequately represented by no-take MPAs. These results, combined with previous studies in the Southern Ocean, can help inform the continued design, implementation, and evaluation of a representative system of MPAs for Southern Ocean conservation and management.
    Repository Name: EPIC Alfred Wegener Institut
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  • 149
    Publication Date: 2022-08-02
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Gomaa, F., Utter, D. R., Loo, W., Lahr, D. J. G., & Cavanaugh, C. M. Exploring the protist microbiome: the diversity of bacterial communities associated with Arcella spp. (Tubulina: Amoebozoa). European Journal of Protistology, 82, (2022): 125861, https://doi.org/10.1016/j.ejop.2021.125861.
    Description: Research on protist-bacteria interactions is increasingly relevant as these associations are now known to play important roles in ecosystem and human health. Free-living amoebae are abundant in all environments and are frequent hosts for bacterial endosymbionts including pathogenic bacteria. However, to date, only a small fraction of these symbionts have been identified, while the structure and composition of the total symbiotic bacterial communities still remains largely unknown. Here, we use the testate amoeba Arcella spp. as model organisms to investigate the specificity and diversity of Arcella-associated microbial communities. High-throughput amplicon sequencing from the V4 region of the 16S rRNA gene revealed high diversity in the bacterial communities associated with the wild Arcella spp. To investigate the specificity of the associated bacterial community with greater precision, we investigated the bacterial communities of two lab-cultured Arcella species, A. hemispherica and A. intermedia, grown in two different media types. Our results suggest that Arcella-bacteria associations are species-specific, and that the associated bacterial community of lab-cultured Arcella spp. remains distinct from that of the surrounding media. Further, each host Arcella species could be distinguished based on its bacterial composition. Our findings provide insight into the understanding of eukaryotic-bacterial symbiosis.
    Description: This project was funded by National Science Foundation Postdoctoral Research Fellowship in Biology to F. Gomaa, Grant Number: PRFB1611514. Support was provided to D.R.U. from the National Science Foundation Graduate Research Fellowship Program under Grant No. DGE1745303 to D.R.U and by Harvard University’s Department of Organismic and Evolutionary Biology program.
    Keywords: Arcella- associated microbiome ; Intracellular bacterial diversity ; Heterotrophic amoebae ; Amoeba-resistant bacteria
    Repository Name: Woods Hole Open Access Server
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  • 150
    Publication Date: 2022-07-20
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Clark, S., Hubbard, K., Ralston, D., McGillicuddy, D., Stock, C., Alexander, M., & Curchitser, E. Projected effects of climate change on Pseudo-nitzschia bloom dynamics in the Gulf of Maine. Journal of Marine Systems, 230, (2022): 103737, https://doi.org/10.1016/j.jmarsys.2022.103737.
    Description: Worldwide, warming ocean temperatures have contributed to extreme harmful algal bloom events and shifts in phytoplankton species composition. In 2016 in the Gulf of Maine (GOM), an unprecedented Pseudo-nitzschia bloom led to the first domoic-acid induced shellfishery closures in the region. Potential links between climate change, warming temperatures, and the GOM Pseudo-nitzschia assemblage, however, remain unexplored. In this study, a global climate change projection previously downscaled to 7-km resolution for the Northwest Atlantic was further refined with a 1–3-km resolution simulation of the GOM to investigate the effects of climate change on HAB dynamics. A 25-year time slice of projected conditions at the end of the 21st century (2073–2097) was compared to a 25-year hindcast of contemporary ocean conditions (1994–2018) and analyzed for changes to GOM inflows, transport, and Pseudo-nitzschia australis growth potential. On average, climate change is predicted to lead to increased temperatures, decreased salinity, and increased stratification in the GOM, with the largest changes occurring in the late summer. Inflows from the Scotian Shelf are projected to increase, and alongshore transport in the Eastern Maine Coastal Current is projected to intensify. Increasing ocean temperatures will likely make P. australis growth conditions less favorable in the southern and western GOM but improve P. australis growth conditions in the eastern GOM, including a later growing season in the fall, and a longer growing season in the spring. Combined, these changes suggest that P. australis blooms in the eastern GOM could intensify in the 21st century, and that the overall Pseudo-nitzschia species assemblage might shift to warmer-adapted species such as P. plurisecta or other Pseudo-nitzschia species that may be introduced.
    Description: This research was funded by the National Science Foundation (Grant Number OCE-1840381), the National Institute of Environmental Health Sciences (Grant Number 1P01ES028938), the Woods Hole Center for Oceans and Human Health, and the Academic Programs Office of the Woods Hole Oceanographic Institution.
    Keywords: Gulf of Maine ; ROMS ; Pseudo-nitzschia ; Climate change ; Harmful algal blooms
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  • 151
    Publication Date: 2022-07-20
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Tarrés, M., Cerdà-Domènech, M., Pedrosa-Pàmies, R., Rumín-Caparrós, A., Calafat, A., Canals, M., & Sanchez-Vidal, A. Particle fluxes in submarine canyons along a sediment-starved continental margin and in the adjacent open slope and basin in the SW Mediterranean Sea. Progress in Oceanography, 203, (2022): 102783, https://doi.org/10.1016/j.pocean.2022.102783.
    Description: Investigating the transfer of particulate matter from the continental shelf to the deep basin is critical to understand the functioning of deep sea ecosystems. In this paper we present novel results on the temporal variability of particle fluxes to the deep in three physiographic domains of a 240 km long margin segment and nearby basin off Murcia and Almeria provinces in the SW Mediterranean Sea, which are submarine canyons forming a rather diverse set (namely Escombreras, Garrucha-Almanzora and Almeria), the adjacent open slope and the deep basin. This margin is located off one of the driest regions in Europe and, therefore, its study may help understanding how mainland aridity translates into the export of particles to deep margin environments. Five mooring lines equipped with currentmeters, turbidity-meters and sediment traps were deployed for one entire annual cycle, from March 2015 to March 2016. We combine oceanographic, hydrological and meteorological data with grain size and bulk elemental data (organic carbon, opal, CaCO3, lithogenic) from the collected sinking particles to understand what drives particle transfers in such an under-studied setting, and to quantify the resulting fluxes and assess their spatio-temporal variability. Weighted total mass fluxes in canyons range from 1.64 g m−2 d−1 in Almeria Canyon to 7.33 g m−2 d−1 in Garrucha-Almanzora Canyon system, which are rather low values compared to other submarine canyons in the Western Mediterranean Sea. This results from the absence of extreme wind-storm events during the investigated time period combined with the reduced sediment input to the inner shelf by river systems in the study area. Our results also show that wind-storms are the main trigger for off-shelf particle transport to the deep margin, both within submarine canyons and over the open slope. The most significant transfer period is associated to a set of north-eastern storms in early spring 2015, when the off-shelf transport likely was promoted by storm-induced downwelling. However, the prevailing oceanographic conditions restricts the advection of water down the canyon heads to a few hundred meters, thus promoting a bottom-detached transport of particles seaward. Overall physiography, canyon head incision into the continental shelf and the distance of the canyon head to the shoreline (e.g. very short in Garrucha Canyon) play a key role in particle trapping capability and, therefore, in easing downslope particle transport. Further, bottom trawling activities around the Garrucha-Almanzora Canyon system, feed a nepheloid layer at depths in excess of 400 m, subsequently enhancing particle fluxes throughout the study period. In contrast, maximum particle fluxes in the deep basin respond to seasonal phytoplankton blooms. Our study shows that particle export from the shallow inner margin to the deep outer margin in sediment-starved settings, even if limited, does occur as dominated by atmosphere and ocean driven short-lived events. However, that export does not reach too far as at several tens of kilometres from the shelf edge advective fluxes are replaced by vertical ones impelled by phytoplankton dynamics.
    Description: This work was supported by research projects NUREIEV (ref. CTM2013-44598-R) and NUREIEVA (ref. CTM2016-75953-C2-1-R). GRC Geociències Marines is funded by the Catalan Government within its excellence research groups program (ref. 2017 SGR 315). M.Tarrés was supported by a FPI grant from Ministerio de Ciencia, Innovación y Universidades of the Spanish Government.
    Keywords: Particle fluxes ; Sediment-starved continental margin ; Submarine canyons ; Open slope ; Deep basin ; Mediterranean Sea
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  • 152
    Publication Date: 2022-07-20
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Light, C., Arbic, B., Martin, P., Brodeau, L., Farrar, J., Griffies, S., Kirtman, B., Laurindo, L., Menemenlis, D., Molod, A., Nelson, A., Nyadjro, E., O’Rourke, A., Shriver, J., Siqueira, L., Small, R., & Strobach, E. Effects of grid spacing on high-frequency precipitation variance in coupled high-resolution global ocean–atmosphere models. Climate Dynamics, (2022): 1–27, https://doi.org/10.1007/s00382-022-06257-6.
    Description: High-frequency precipitation variance is calculated in 12 different free-running (non-data-assimilative) coupled high resolution atmosphere–ocean model simulations, an assimilative coupled atmosphere–ocean weather forecast model, and an assimilative reanalysis. The results are compared with results from satellite estimates of precipitation and rain gauge observations. An analysis of irregular sub-daily fluctuations, which was applied by Covey et al. (Geophys Res Lett 45:12514–12522, 2018. https://doi.org/10.1029/2018GL078926) to satellite products and low-resolution climate models, is applied here to rain gauges and higher-resolution models. In contrast to lower-resolution climate simulations, which Covey et al. (2018) found to be lacking with respect to variance in irregular sub-daily fluctuations, the highest-resolution simulations examined here display an irregular sub-daily fluctuation variance that lies closer to that found in satellite products. Most of the simulations used here cannot be analyzed via the Covey et al. (2018) technique, because they do not output precipitation at sub-daily intervals. Thus the remainder of the paper focuses on frequency power spectral density of precipitation and on cumulative distribution functions over time scales (2–100 days) that are still relatively “high-frequency” in the context of climate modeling. Refined atmospheric or oceanic model grid spacing is generally found to increase high-frequency precipitation variance in simulations, approaching the values derived from observations. Mesoscale-eddy-rich ocean simulations significantly increase precipitation variance only when the atmosphere grid spacing is sufficiently fine (〈 0.5°). Despite the improvements noted above, all of the simulations examined here suffer from the “drizzle effect”, in which precipitation is not temporally intermittent to the extent found in observations.
    Description: Support for CXL’s effort on this project was provided by a Research Experiences for Undergraduates (REU) supplement for National Science Foundation (NSF) grant OCE-1851164 to BKA, which also provided partial support for PEM. In addition, BKA acknowledges NSF grant OCE-1351837, which provided partial support for AKO, Office of Naval Research grant N00014-19-1-2712 and NASA grants NNX17AH55G, which also provided partial support for ADN, and 80NSSC20K1135. JTF’s participation, and the SPURS-II buoy data, were funded by NASA grants 80NSSC18K1494 and NNX15AG20G.
    Keywords: Precipitation ; High-frequency precipitation ; Numerical modeling ; High-resolution models ; Coupled ocean-atmosphere models
    Repository Name: Woods Hole Open Access Server
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  • 153
    Publication Date: 2022-07-23
    Description: This open access book presents the results of three years collaboration between earth scientists and data scientists, in developing and applying data science methods for scientific discovery. The book will be highly beneficial for other researchers at senior and graduate level, interested in applying visual data exploration, computational approaches and scientifc workflows.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Book , NonPeerReviewed
    Format: application/pdf
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  • 154
    Publication Date: 2022-07-15
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Lefebvre, K., Fachon, E., Bowers, E., Kimmel, D., Snyder, J., Stimmelmayr, R., Grebmeier, J., Kibler, S., Hardison, D., Anderson, D., Kulis, D., Murphy, J., Gann, J., Cooper, D., Eisner, L., Duffy-Anderson, J., Sheffield, G., Pickart, R., Mounsey, A., Willis, M. L., Stabeno, P., & Siddon, E. Paralytic shellfish toxins in Alaskan Arctic food webs during the anomalously warm ocean conditions of 2019 and estimated toxin doses to Pacific walruses and bowhead whales. Harmful Algae, 114, (2022): 102205, https://doi.org/10.1016/j.hal.2022.102205.
    Description: Climate change-related ocean warming and reduction in Arctic sea ice extent, duration and thickness increase the risk of toxic blooms of the dinoflagellate Alexandrium catenella in the Alaskan Arctic. This algal species produces neurotoxins that impact marine wildlife health and cause the human illness known as paralytic shellfish poisoning (PSP). This study reports Paralytic Shellfish Toxin (PST) concentrations quantified in Arctic food web samples that include phytoplankton, zooplankton, benthic clams, benthic worms, and pelagic fish collected throughout summer 2019 during anomalously warm ocean conditions. PSTs (saxitoxin equivalents, STX eq.) were detected in all trophic levels with concentrations above the seafood safety regulatory limit (80 μg STX eq. 100 g−1) in benthic clams collected offshore on the continental shelf in the Beaufort, Chukchi, and Bering Seas. Most notably, toxic benthic clams (Macoma calcarea) were found north of Saint Lawrence Island where Pacific walruses (Odobenus rosmarus) are known to forage for a variety of benthic species, including Macoma. Additionally, fecal samples collected from 13 walruses harvested for subsistence purposes near Saint Lawrence Island during March to May 2019, all contained detectable levels of STX, with fecal samples from two animals (78 and 72 μg STX eq. 100 g−1) near the seafood safety regulatory limit. In contrast, 64% of fecal samples from zooplankton-feeding bowhead whales (n = 9) harvested between March and September 2019 in coastal waters of the Beaufort Sea near Utqiaġvik (formerly Barrow) and Kaktovik were toxin-positive, and those levels were significantly lower than in walruses (max bowhead 8.5 μg STX eq. 100 g−1). This was consistent with the lower concentrations of PSTs found in regional zooplankton prey. Maximum ecologically-relevant daily toxin doses to walruses feeding on clams and bowhead whales feeding on zooplankton were estimated to be 21.5 and 0.7 μg STX eq. kg body weight−1 day−1, respectively, suggesting that walruses had higher PST exposures than bowhead whales. Average and maximum STX doses in walruses were in the range reported previously to cause illness and/or death in humans and humpback whales, while bowhead whale doses were well below those levels. These findings raise concerns regarding potential increases in PST/STX exposure risks and health impacts to Arctic marine mammals as ocean warming and sea ice reduction continue.
    Description: This research was funded by ECOHAB project number NA20NOS4780195 (to KAL and DMA), the North Pacific Research Board (NPRB Arctic Integrated Ecosystem Research Program), the Bureau of Ocean and Energy Management (BOEM), the National Science Foundation (NSF) Office of Polar Programs (OPP-1823002 and OPP-1733564), the National Oceanic and Atmospheric Administration (NOAA) Arctic Research program (through the Cooperative Institute for the North Atlantic Region [CINAR; Grants NA14OAR4320158 and NA19OAR4320074] and the Cooperative Institute for the North Atlantic Region NOAA CINAR Grant # 22309.07 UMCES [to JG at the University of Maryland Center for Environmental Science]), the Alaska Sustainable Salmon Fund project #51002, the Alaska Department of Fish and Game, the North Slope Borough Department of Wildlife management, the U.S. National Park Service Shared Beringian Heritage Program grant # P21AC12214-00, and NOAA's Northwest Fisheries Science Center (NWFSC) and Alaska Fisheries Science Center (AFSC). We also thank the RACE Groundfish and Shellfish Assessment Programs of the NOAA Fisheries AFSC and the crew of the F/V Knight for their assistance in securing additional benthic biological samples used in this study. Collection of harvested bowhead whale samples was conducted under NMFS Permit #21386. Collection of harvested walrus samples was conducted under US Fish and Wildlife permit #MA-041309-5. This is ECOHAB publication #1000.
    Keywords: harmful algal blooms ; algal toxins ; trophic transfer ; saxitoxin ; paralytic shellfish poisoning ; marine mammals
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  • 155
    Publication Date: 2022-07-26
    Description: Application of farmyard manure (FYM) is common practice to improve physical and chemical properties of arable soil and crop yields. However, studies on effects of FYM application mainly focussed on topsoils, whereas subsoils have rarely been addressed so far. We, therefore, investigated the effects of 36‐year FYM application with different rates of annual organic carbon (OC) addition (0, 469, 938 and 1875 g C m−2 a−1) on OC contents of a Chernozem in 0–30 cm (topsoil) and 35–45 cm (subsoil) depth. We also investigated its effects on soil structure and hydraulic properties in subsoil. X‐ray computed tomography was used to analyse the response of the subsoil macropore system (≥19 μm) and the distribution of particulate organic matter (POM) to different FYM applications, which were related to contents in total OC (TOC) and water‐extractable OC (WEOC). We show that FYM‐C application of 469 g C m−2 a−1 caused increases in TOC and WEOC contents only in the topsoil, whereas rates of ≥938 g C m−2 a−1 were necessary for TOC enrichment also in the subsoil. At this depth, the subdivision of TOC into different OC sources shows that most of the increase was due to fresh POM, likely by the stimulation of root growth and bioturbation. The increase in subsoil TOC went along with increases in macroporosity and macropore connectivity. We neither observed increases in plant‐available water capacity nor in unsaturated hydraulic conductivity. In conclusion, only very high application of FYM over long periods can increase OC content of subsoil at our study site, but this increase is largely based on fresh, easily degradable POM and likely accompanied by high C losses when considering the discrepancy between OC addition rate by FYM and TOC response in soil. Highlights A new image processing procedure to distinguish fresh and decomposed POM. The increase of subsoil C stock based to a large extend on fresh, labile POM. Potential of arable subsoils for long‐term C storage by large FYM application rates is limited. The increase in TOC has no effect on hydraulic properties of the subsoil.
    Description: Deutsche Forschungsgemeinschaft http://dx.doi.org/10.13039/501100001659
    Keywords: ddc:631.4
    Language: English
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  • 156
    Publication Date: 2022-11-04
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Voss, B., Eglinton, T., Peucker-Ehrenbrink, B., Galy, V., Lang, S., McIntyre, C., Spencer, R., Bulygina, E., Wang, Z., & Guay, K. Isotopic evidence for sources of dissolved carbon and the role of organic matter respiration in the Fraser River basin, Canada. Biogeochemistry. (2022), https://doi.org/10.1007/s10533-022-00945-5.
    Description: Sources of dissolved and particulate carbon to the Fraser River system vary significantly in space and time. Tributaries in the northern interior of the basin consistently deliver higher concentrations of dissolved organic carbon (DOC) to the main stem than other tributaries. Based on samples collected near the Fraser River mouth throughout 2013, the radiocarbon age of DOC exported from the Fraser River does not change significantly across seasons despite a spike in DOC concentration during the freshet, suggesting modulation of heterogeneous upstream chemical and isotopic signals during transit through the river basin. Dissolved inorganic carbon (DIC) concentrations are highest in the Rocky Mountain headwater region where carbonate weathering is evident, but also in tributaries with high DOC concentrations, suggesting that DOC respiration may be responsible for a significant portion of DIC in this basin. Using an isotope and major ion mass balance approach to constrain the contributions of carbonate and silicate weathering and DOC respiration, we estimate that up to 33 ± 11% of DIC is derived from DOC respiration in some parts of the Fraser River basin. Overall, these results indicate close coupling between the cycling of DOC and DIC, and that carbon is actively processed and transformed during transport through the river network.
    Description: Open Access funding provided by the MIT Libraries. This work was supported by the WHOI Academic Programs Office, the MIT EAPS Department Student Assistance Fund, and the PAOC Houghton Fund to BMV; NSF-ETBC grants OCE-0851015 to BPE, VG, and TIE and OCE-0851101 to RGMS; NSF grant EAR-1226818 to BPE; NSF grant OCE-0928582 to TIE and VG; and a WHOI Arctic Research Initiative grant to ZAW.
    Keywords: River ; Carbon isotopes ; Radiocarbon ; Weathering ; Carbon cycle
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  • 157
    Publication Date: 2022-12-27
    Description: Magmas often experience severe disequilibrium conditions during their migration through the Earth's crust and the subsequent emplacement on its surface. During their transport, magmas are subjected to a wide range of cooling (q) and deformation rates (), generating physico-chemical perturbations in the magmatic system able to inhibit or promote crystallization processes. Quantifying the magnitude and timescale of kinetic effects is essential to correctly constrain the rheological evolution of magmas and their ability to flow. Here we present a suite of cooling deformation experiments (CDE) conducted on a basalt from Mt. Etna (Sicily, Italy) to disentangle and model the concurrent effects of q (from 1 to 10 °C/min) and (from 1 to 10 s−1) on the rheology of the system. The analysis of the temporal evolution of viscosity indicates that both q and strongly affect the onset of crystallization and achievement of a rheological cut-off over time, which represents the steep viscosity increase responsible for inhibiting magma flow. Both these rheological thresholds occur at lower T and earlier in time with increasing q, as well as at higher T and earlier in time with increasing . To reproduce the observed effects of crystallization on the apparent viscosity, we adopt a stretched exponential function that identifies two main crystallization regimes: i) a first shear-induced crystallization regime, characterized by a gentle viscosity increase and ii) a second cooling-dominated regime, marked by a steeper viscosity increase. The relative extent of these crystallization regimes strictly depends on the interplay between q and on the crystallization kinetics and suggest a first order control of q and a subordinate role of .
    Description: Published
    Description: 117725
    Description: 3V. Proprietà chimico-fisiche dei magmi e dei prodotti vulcanici
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 158
    Publication Date: 2022-12-14
    Description: New constraints were set on the age of marine deposits in the Pontine Plain and of the related sea level indicators on the Tyrrhenian Sea coast of central Italy by twelve new 40Ar/39Ar dates on detrital sanidine from these deposits. By combining a new geomorphologic analysis and previous morpho-pedostratigraphic studies with these geochronological constraints we reconstructed the geometry of four marine terraces and correlated these with the highstands during the marine isotopic stages (MIS) 9.3, 7.5, 5.5 and 5.3. Results point to a progressive tilting of the terraces, the elevation increasing from the SE to the NW due to differential tectonic uplift that occurred over the last 300 ka. We identified a MIS 9 sea level at 30 - 25 m asl in the northwestern sector, whereas the MIS 7.5 sea level reached a maximum of 24 m asl in the NWand descended to 18 m asl in the central sector. Moderate tilting affected the MIS 5.5 sea level, with an elevation of 12 to 9.5 m asl in between the Anzio and Circeo headlands. Finally, an undeformed MIS 5.3 sea level at ca. 3 m asl is indicated throughout this coastal reach, confirming previous data suggesting a much higher absolute sea level during this highstand with respect to the d18O-derived predicted level.
    Description: Published
    Description: 107866
    Description: 2T. Deformazione crostale attiva
    Description: JCR Journal
    Keywords: Marine terraces ; MIS 5 sea level ; Pontine Plain ; Tyrrhenian Sea ; 04.04. Geology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 159
    Publication Date: 2022-12-22
    Description: The geological carbon cycle has played a key role in controlling climate throughout Earth’s history. For the last ∼ 3 billion years plate tectonics has driven subduction. Subducted slabs have transported CO_2 from the lithosphere, hydrosphere, and atmosphere into the Earth, from where it may be released back to the surface through processes such as arc volcanism or can be stored in the deep interior over geological time. Carbonate-bearing sediments and basalts of altered oceanic crust are the primary media by which carbon is subducted. Therefore, quantifying the depth and amount of CO_2 released from different carbonate-bearing lithologies during subduction is fundamental to understanding whether CO_2 is recycled through arc volcanism or buried in the mantle. The magnitude of CO_2 released from subducting slabs at fore- and sub-arc depths is controlled by processes including ocean crust alteration (i.e., carbonation), metamorphic decarbonation, carbonate dissolution and slab-melting. However, the relative contribution of these processes to overall slab decarbonation is still debated, and will be complex given the variety of sedimentary lithologies and subduction geodynamics. Here, we present a global arc-by-arc lithology-specific analysis of the magnitude of slab CO_2 released purely by metamorphic decarbonation of carbonate-bearing sediment and basalt during subduction of altered oceanic crust, using a thermodynamically rigorous model. We find that metamorphic decarbonation is highly efficient in low carbonate sediments, such as carbonated clay, and in carbonated basalts of altered oceanic crust, causing all of their CO_2 to be removed. Sediments with medium and higher carbonate contents, such as chalk and limestone, are only partially decarbonated, but the combination of metamorphic decarbonation and carbonate dissolution promotes efficient carbon loss. Together they can explain observed magmatic CO_2 emissions in carbonate-rich arcs. Warm slabs, such as Mexico and Cascadia, produce complete metamorphic decarbonation of carbonate minerals beneath fore-arcs. Under more common cold and intermediate thermal regimes metamorphic decarbonation of carbonate minerals occurs at depths between ∼ 80 and 170 km ( ∼ 2.3 to 5.5 GPa) promoting CO_2 input into the mantle sources of volcanic arcs. Overall, our results demonstrate that sub-arc decarbonation is typically considered an important potential source of slab-derived CO_2 , which needs to be considered together with carbonate dissolution to explain observed volcanic CO_2 emissions. In many arcs the modelled CO_2 flux from sediment and basalts of altered oceanic crust into the wedge exceeds the observed CO 2 output suggesting that the mantle wedge and arc lithosphere may sequester some CO_2 .
    Description: Published
    Description: 117945
    Description: 2V. Struttura e sistema di alimentazione dei vulcani
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 160
    Publication Date: 2022-12-01
    Description: The processes occurring on the Earth are controlled by several gradients. The surface of the Planet is featured by complex geological patterns produced by both endogenous and exogenous phenomena. The lack of direct investigations still makes Earth interior poorly understood and prevents complete clarification of the mechanisms ruling geo- dynamics and tectonics. Nowadays, slab-pull is considered the force with the greatest impact on plate motions, but also ridge-push, trench suction and physico-chemical heterogeneities are thought to play an important role. However, several counterargu- ments suggest that these mechanisms are insufficient to explain plate tectonics. While large part of the scientific community agreed that either bottom-up or top-down driven mantle convection is the cause of lithospheric displacements, geodetic observations and geodynamic models also support an astronomical contribution to plate motions. Moreover, several evidences indicate that tectonic plates follow a mainstream and how the lithosphere has a roughly westerly drift with respect to the asthenospheric mantle. An even more wide-open debate rises for the occurrence of earthquakes, which should be framed within the different tectonic setting, which affects the spatial and temporal properties of seismicity. In extensional regions, the dominant source of energy is given by gravitational potential, whereas in strike-slip faults and thrusts, earthquakes mainly dissipate elastic potential energy indeed. In the present article, a review is given of the most significant results of the last years in the field of geodynamics and earthquake geology following the common thread of gradients, which ultimately shape our planet.
    Description: Published
    Description: 801–881
    Description: 1T. Struttura della Terra
    Description: JCR Journal
    Keywords: Earth’s gradients ; Forces driving plate motions ; Polarized plate tectonics ; Global scale geodynamics ; Earthquake geology ; The role of gradients in seismic dynamics
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 161
    Publication Date: 2022-12-01
    Description: An accurate survey of old and new datasets allowed us to probe the nature and role of fluids in the seismogenic processes of the Apennines mountain range in Italy. New datasets include the 1985–2021 instrumented seismicity catalog, the computed seismogenic thickness, and geodetic velocities and strains, whereas data from the literature comprise focal mechanism solutions, CO2 release, Moho depth, tomographic seismic velocities, heat flow and Bouguer gravity anomalies. Most of the inspected datasets highlight differences between the western and eastern domains of the Apennines, while the transition zone is marked by high geodetic strain, prevailing uplift at the surface and high seismic release, and spatially corresponds with the overlapping Tyrrhenian and Adriatic Mohos. Published tomographic models suggest the presence of a large hot asthenospheric mantle wedge which intrudes beneath the western side of the Apennines and disappears at the southern tip of the southern Apennines. This wedge modulates the thermal structure and rheology of the overlying crust as well as the melting of carbonate-rich sediments of the subducting Adriatic lithosphere. As a result, CO2-rich fluids of mantle-origin have been recognized in association with the occurrence of destructive seismic sequences in the Apennines. The stretched western domain of the Apennines is characterized by a broad pattern of emissions from CO2-rich fluids that vanishes beneath the axial belt of the chain, where fluids are instead trapped within crustal overpressurized reservoirs, favoring their involvement in the evolution of destructive seismic sequences in that region. In the Apennines, areas with high mantle He are associated with different degrees of metasomatism of the mantle wedge from north to south. Beneath the chain, the thickness and permeability of the crust control the formation of overpressurized fluid zones at depth and the seismicity is favored by extensional faults that act as high permeability pathways. This multidisciplinary study aims to contribute to our understanding of the fluid-related mechanisms of earthquake preparation, nucleation and evolution encouraging a multiparametric monitoring system of different geophysical and geochemical observables that could lead the creation of a data-constrained and reliable conceptual model of the role of fluids in the preparatory phase of earthquakes in the Apennines.
    Description: The INGV Earthquake Department Strategic Project FURTHER “The role of FlUids in the pReparaTory pHase of EaRthquakes in Southern Apennines”
    Description: Published
    Description: 104236
    Description: 1T. Struttura della Terra
    Description: 2T. Deformazione crostale attiva
    Description: 3T. Fisica dei terremoti e Sorgente Sismica
    Description: 4T. Sismicità dell'Italia
    Description: 9T. Geochimica dei fluidi applicata allo studio e al monitoraggio di aree sismiche
    Description: JCR Journal
    Keywords: CO2 Earth degassing ; Earthquakes ; Mantle wedge ; Subduction ; Apennines ; 04.06. Seismology ; Geochemistry ; 04.03. Geodesy
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 162
    Publication Date: 2022-12-27
    Description: The characterization of the fling-step represents a challenging task due to the shortage of near-source records with permanent tectonic displacement and the limitation in retrieving the fling-amplitude from accelerometric waveforms. In recent years, innovative ground-motion processing techniques have been developed for a more accurate estimation of both fling-displacements and spectral displacements in contrast to traditional bandpass filtering, although their application is still unusual. In this paper, we exploit the newly released dataset of the Near-Source Strong-motion records (NESS2) uniformly processed with the extended BASeline COrrection technique (eBASCO), against which we propose: (1) a new empirically-based ground motion model (GMM) for the prediction of the fling-step, and (2) an adjustment factor of the spectral displacements predicted by a reference GMM to account for the contribution of the fling-step at long periods. Such models are in agreement with observations and existing GMMs, and thus could be advantageously employed in seismic hazard analyses.
    Description: Published
    Description: 107294
    Description: 5T. Sismologia, geofisica e geologia per l'ingegneria sismica
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 163
    Publication Date: 2022-12-27
    Description: Santiaguito, Guatemala, represents one of the best cases of active lava dome complex in the world, producing lava flow effusion, weak explosive activity, and cycles of lava dome extrusion over varying timescales. Since the inception in 1922, it has shown a remarkable constant eruptive activity, characterized by effusion of blocky domes and lava flows punctuated by moderate explosions of gas-and-ash and pyroclastic flows. In this study, we reconstruct the time evolution of discharge rates of Santiaguito across one entire century, from 1922 to 2021, combining, for the more recent activity, new satellite thermal data. By using discrete Fourier transform (DFT) and Morlet wavelet analyses, we identify three fundamental periodicities in subsets of the 1922–2021 time-series: (i) long term (ca. 10 years), (ii) intermediate term (ca. 3.5 years), and (iii) short term (from ca. 1 year to ca. 3 months), which are comparable with those observed at other lava dome eruptions at calc-alkaline volcanoes. Such inferred periodicities provide a powerful tool for the interpretation of the non-linear eruptive behaviour and represent a pivotal benchmark for numerical modelling aimed to reconstruct the dynamics of the magma feeding system based on a time-averaged discharge rate dataset.
    Description: Published
    Description: 107
    Description: 5V. Processi eruttivi e post-eruttivi
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 164
    Publication Date: 2022-12-27
    Description: The 1915, Mw6.7, Fucino earthquake is one of the most destructive events occurred in the central-southern Apennines (Central Italy) in pre-instrumental era, involving normal faulting in a deep alluvial basin. This study shows the application of the empirical non-ergodic approach (NESK method) for mapping ground shaking related to this historical event, taking into account the regional features of source, propagation and site contributions. Corrections of the source-region and spatially correlated maps of site and path residuals are combined with median prediction at the reference rock (i.e. without site amplification) to generate spatially variable ground shaking and associated variability in terms of peak ground acceleration and spectral ordinates at vibration periods from 0.01s to 2s. The method captures the main spatial non-stationarities and anisotropies of the shaking fields produced by this earthquake in and around the Fucino basin. In particular, we obtain patterns of seismic motion quite in accordance with the results of other methods and the macroseismic intensity field. Marked amplifications of the shaking in the long-periods are also captured, due to the coupling of 3D site effects, especially in the deeper portion of the basin, with propagation effects mainly focused towards the eastern part of the fault. These results confirm that the non-ergodic shaking scenarios from NESK can provide useful indications even in the case of very complex seismological and geological contexts, such as in the case of strong events in deep sedimentary basins.
    Description: Published
    Description: 107622
    Description: 5T. Sismologia, geofisica e geologia per l'ingegneria sismica
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 165
    Publication Date: 2022-05-26
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Pirotta, E., Thomas, L., Costa, D., Hall, A., Harris, C., Harwood, J., Kraus, S., Miller, P., Moore, M., Photopoulou, T., Rolland, R., Schwacke, L., Simmons, S., Southall, B., & Tyack, P. Understanding the combined effects of multiple stressors: a new perspective on a longstanding challenge. Science of The Total Environment, 821, (2022): 153322, https://doi.org/10.1016/j.scitotenv.2022.153322.
    Description: Wildlife populations and their habitats are exposed to an expanding diversity and intensity of stressors caused by human activities, within the broader context of natural processes and increasing pressure from climate change. Estimating how these multiple stressors affect individuals, populations, and ecosystems is thus of growing importance. However, their combined effects often cannot be predicted reliably from the individual effects of each stressor, and we lack the mechanistic understanding and analytical tools to predict their joint outcomes. We review the science of multiple stressors and present a conceptual framework that captures and reconciles the variety of existing approaches for assessing combined effects. Specifically, we show that all approaches lie along a spectrum, reflecting increasing assumptions about the mechanisms that regulate the action of single stressors and their combined effects. An emphasis on mechanisms improves analytical precision and predictive power but could introduce bias if the underlying assumptions are incorrect. A purely empirical approach has less risk of bias but requires adequate data on the effects of the full range of anticipated combinations of stressor types and magnitudes. We illustrate how this spectrum can be formalised into specific analytical methods, using an example of North Atlantic right whales feeding on limited prey resources while simultaneously being affected by entanglement in fishing gear. In practice, case-specific management needs and data availability will guide the exploration of the stressor combinations of interest and the selection of a suitable trade-off between precision and bias. We argue that the primary goal for adaptive management should be to identify the most practical and effective ways to remove or reduce specific combinations of stressors, bringing the risk of adverse impacts on populations and ecosystems below acceptable thresholds.
    Description: This work was supported by the Office of Naval Research [grant numbers N000142012697, N000142112096]; and the Strategic Environmental Research and Development Program [grant numbers RC20-1097, RC20-7188, RC21-3091].
    Keywords: Adaptive management ; Climate change ; Combined effects ; Mechanistic modelling ; Multiple stressors ; Population consequences
    Repository Name: Woods Hole Open Access Server
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  • 166
    Publication Date: 2022-05-26
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Cuthbert, R. N., Diagne, C., Hudgins, E. J., Turbelin, A., Ahmed, D. A., Albert, C., Bodey, T. W., Briski, E., Essl, F., Haubrock, P. J., Gozlan, R. E., Kirichenko, N., Kourantidou, M., Kramer, A. M., & Courchamp, F. Biological invasion costs reveal insufficient proactive management worldwide. Science of the Total Environment, 819, (2022): 153404, https://doi.org/10.1016/j.scitotenv.2022.153404.
    Description: The global increase in biological invasions is placing growing pressure on the management of ecological and economic systems. However, the effectiveness of current management expenditure is difficult to assess due to a lack of standardised measurement across spatial, taxonomic and temporal scales. Furthermore, there is no quantification of the spending difference between pre-invasion (e.g. prevention) and post-invasion (e.g. control) stages, although preventative measures are considered to be the most cost-effective. Here, we use a comprehensive database of invasive alien species economic costs (InvaCost) to synthesise and model the global management costs of biological invasions, in order to provide a better understanding of the stage at which these expenditures occur. Since 1960, reported management expenditures have totalled at least US$95.3 billion (in 2017 values), considering only highly reliable and actually observed costs — 12-times less than damage costs from invasions ($1130.6 billion). Pre-invasion management spending ($2.8 billion) was over 25-times lower than post-invasion expenditure ($72.7 billion). Management costs were heavily geographically skewed towards North America (54%) and Oceania (30%). The largest shares of expenditures were directed towards invasive alien invertebrates in terrestrial environments. Spending on invasive alien species management has grown by two orders of magnitude since 1960, reaching an estimated $4.2 billion per year globally (in 2017 values) in the 2010s, but remains 1–2 orders of magnitude lower than damages. National management spending increased with incurred damage costs, with management actions delayed on average by 11 years globally following damage reporting. These management delays on the global level have caused an additional invasion cost of approximately $1.2 trillion, compared to scenarios with immediate management. Our results indicate insufficient management — particularly pre-invasion — and urge better investment to prevent future invasions and to control established alien species. Recommendations to improve reported management cost comprehensiveness, resolution and terminology are also made.
    Description: The authors thank the French National Research Agency (ANR-14-CE02-0021) and the BNP-Paribas Foundation Climate Initiative for funding the InvaCost project and the work on InvaCost database development. The present work was conducted in the frame of InvaCost workshop carried in November 2019 (Paris, France) and funded by the AXA Research Fund Chair of Invasion Biology and is part of the AlienScenario project funded by BiodivERsA and Belmont-Forum call 2018 on biodiversity scenarios. RNC was funded through a Leverhulme Early Career Fellowship (ECF-2021-001) from the Leverhulme Trust and a Humboldt Postdoctoral Fellowship from the Alexander von Humboldt Foundation. DAA is funded by the Kuwait Foundation for the Advancement of Sciences (KFAS) (PR1914SM-01) and the Gulf University for Science and Technology (GUST) internal seed funds (187092 & 234597). CA was funded by the French National Centre for Scientific Research (CNRS). TWB acknowledges funding from the European Union's Horizon 2020 research and innovation programme Marie Skłodowska-Curie fellowship (Grant No. 747120). FE was funded through the 2017–2018 Belmont Forum and BiodivERsA joint call for research proposals, under the BiodivScen ERA-Net COFUND programme, and with the funding organisation Austrian Science Foundation FWF (grant I 4011-B32). NK is funded by the basic project of Sukachev Institute of Forest SB RAS, Russia (Project No. 0287-2021-0011; data mining) and the Russian Science Foundation (project No. 21-16-00050; data analysis).
    Keywords: Biosecurity ; Delayed control and eradication ; Global trends ; InvaCost ; Invasive alien species ; Socio-economic impacts
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  • 167
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Koopmans, D., Meyer, V., Schaap, A., Dewar, M., Farber, P., Long, M., Gros, J., Connelly, D., & Holtappels, M. Detection and quantification of a release of carbon dioxide gas at the seafloor using pH eddy covariance and measurements of plume advection. International Journal of Greenhouse Gas Control, 112, (2021): 103476, https://doi.org/10.1016/j.ijggc.2021.103476.
    Description: We detected a controlled release of CO2 (g) with pH eddy covariance. We quantified CO2 emission using measurements of water velocity and pH in the plume of aqueous CO2 generated by the bubble streams, and using model predictions of vertical CO2 dissolution and its dispersion downstream. CO2 (g) was injected 3 m below the floor of the North Sea at rates of 5.7–143 kg d − 1. Instruments were 2.6 m from the center of the bubble streams. In the absence of injected CO2, pH eddy covariance quantified the proton flux due to naturally-occurring benthic organic matter mineralization (equivalent to a dissolved inorganic carbon flux of 7.6 ± 3.3 mmol m − 2 d − 1, s.e., n = 33). At the lowest injection rate, the proton flux due to CO2 dissolution was 20-fold greater than this. To accurately quantify emission, the kinetics of the carbonate system had to be accounted for. At the peak injection rate, 73 ± 13% (s.d.) of the injected CO2 was emitted, but when kinetics were neglected, the calculated CO2 emission was one-fifth of this. Our results demonstrate that geochemical techniques can detect and quantify very small seafloor sources of CO2 and attribute them to natural or abiotic origins.
    Description: This project received funding from the European Union's Horizon 2020 research and innovation program under grant agreement No. 654462 (STEMM-CCS), it also received funding from the Max Planck Society and the Helmholtz Society. MHL was supported by US NSF grant # OCE-1657727.
    Keywords: CO2 vent ; Offshore CCS ; Leakage detection and quantification ; Marine sediment ; Proton flux
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  • 168
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Buchan, S. J., Perez-Santos, I., Narvaez, D., Castro, L., Stafford, K. M., Baumgartner, M. F., Valle-Levinson, A., Montero, P., Gutierrez, L., Rojas, C., Daneri, G., & Neira, S. Intraseasonal variation in southeast Pacific blue whale acoustic presence, zooplankton backscatter, and oceanographic variables on a feeding ground in Northern Chilean Patagonia. Progress in Oceanography, 199,(2021): 102709, https://doi.org/10.1016/j.pocean.2021.102709.
    Description: Seasonal variation in the acoustic presence of blue whale calls has been widely reported for feeding grounds worldwide, however variation over the submonthly scale (several days to 〈1 month) has been examined to a much lesser extent. This study combines passive acoustic, hydroacoustic, and in situ oceanographic observations collected at a mooring in the Corcovado Gulf, Northern Chilean Patagonia, from January 2016-February 2017, to examine the temporal variation in blue whale acoustic occurrence and prey backscatter over seasonal and submonthly scales. Time series data for a) Southeast Pacific blue whale song calls and D-calls, b) zooplankton backscatter, c) tidal amplitude, and d) meridional and zonal wind stress were examined visually for seasonal trends. To examine submonthly timescales over the summer feeding season (January-June), wavelet transforms and wavelet coherence were applied; generalized linear models (GLM) were also applied. There was a 3-month lag between the seasonal onsets of high zooplankton backscatter (October) and blue whale acoustic presence (January), and an almost immediate drop in blue whale acoustic presence with the seasonal decrease of backscatter (June). This may be due to the use of memory by animals when timing their arrival on the feeding ground, but the timing of their departure may be related to detection of low prey availability. Over the summer feeding season, blue whale acoustic presence was strongly associated with zooplankton backscatter (GLM coefficient p ≪ 0.0001). Song calls followed a seasonal cycle, but D-calls appeared to respond to short term variations in environmental conditions over submonthly scales. Results suggest that spring tides may increase prey aggregation and/or transport into the Corcovado Gulf, leading to increased blue whale acoustic presence over 15-day or 30-day cycles; and short-lived events of increased wind stress with periodicities of 2–8 days and 16–30 days, may also contribute to the aggregation of prey. We discuss the strengths and limitations of coupling passive and active acoustic data to examine drivers of blue whale distribution.
    Description: Financial support was provided by Centro COPAS Sur-Austral ANID AFB170006 and COPAS Coastal FB10021 https://www.anid.cl/, and Office of Naval Research Global and Office of Naval Research grant N00014-17-1-2606.
    Keywords: Blue whales ; Euphausiids ; Passive acoustics ; Active acoustics ; Estuaries ; Backscatter ; Tidal forcing ; Wind stress
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  • 169
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Farfan, G. A., Apprill, A., Cohen, A., DeCarlo, T. M., Post, J. E., Waller, R. G., & Hansel, C. M. Crystallographic and chemical signatures in coral skeletal aragonite. Coral Reefs. (2121), https://doi.org/10.1007/s00338-021-02198-4.
    Description: Corals nucleate and grow aragonite crystals, organizing them into intricate skeletal structures that ultimately build the world’s coral reefs. Crystallography and chemistry have profound influence on the material properties of these skeletal building blocks, yet gaps remain in our knowledge about coral aragonite on the atomic scale. Across a broad diversity of shallow-water and deep-sea scleractinian corals from vastly different environments, coral aragonites are remarkably similar to one another, confirming that corals exert control on the carbonate chemistry of the calcifying space relative to the surrounding seawater. Nuances in coral aragonite structures relate most closely to trace element chemistry and aragonite saturation state, suggesting the primary controls on aragonite structure are ionic strength and trace element chemistry, with growth rate playing a secondary role. We also show how coral aragonites are crystallographically indistinguishable from synthetic abiogenic aragonite analogs precipitated from seawater under conditions mimicking coral calcifying fluid. In contrast, coral aragonites are distinct from geologically formed aragonites, a synthetic aragonite precipitated from a freshwater solution, and mollusk aragonites. Crystallographic signatures have future applications in understanding the material properties of coral aragonite and predicting the persistence of coral reefs in a rapidly changing ocean.
    Description: This project was funded by the Mineralogical Society of America Edward H. Kraus Crystallographic Research Fund and the WHOI Ocean Ventures Fund. G. Farfan was supported by a National Science Foundation Graduate Research Fellowship Grant No. 1122374 and a Ford Foundation Dissertation Fellowship. Sample collections from R. Waller were funded under NSF Grant Numbers 1245766, 1127582 and NOAA Ocean Exploration Deep Atlantic Stepping Stones. The authors thank Erik Cordes for the samples collected from the Gulf of Mexico, which were supported by NSF BIO-OCE Grant # 1220478. STZC collections from A. Apprill were funded by a Dalio Foundation (now ‘OceanX’) and a KAUST-WHOI Special Academic Partnership Funding Reserve with Christian Voolstra. Research and coral collections in Cuba were conducted under the LH112 AN (25) 2015 license granted by the Cuban Center for Inspection and Environmental Control with the assistance of Patricia Gonzalez and Michael Armenteros. Corals from Western Australia were collected under license number SF009558 obtained by M. McCulloch, and from the Maldives Ministry of Fisheries and Agriculture with collection permits (No. (OTHR)30-D/INDIV/2013/359). Matthew Neave assisted with the collections.
    Keywords: Aragonite ; Crystallography ; Geochemistry ; Biomineralization ; Environmental mineralogy ; Coral skeleton
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  • 170
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Lowenstein, D. P., Mayers, K., Fredricks, H. F., & Van Mooy, B. A. S. Targeted and untargeted lipidomic analysis of haptophyte cultures reveals novel and divergent nutrient-stress adaptations. Organic Geochemistry, 161, (2021): 104315, https://doi.org/10.1016/j.orggeochem.2021.104315.
    Description: Lipids comprise a significant, highly plastic proportion of the biomass in haptophytes, a ubiquitous, globally significant, and genetically diverse clade of photosynthetic microalgae. Recent studies have investigated the cellular lipidomes of disparate, individual species of haptophytes under nutrient-replete and nutrient-limited conditions, but have not investigated how lipidomes vary across the larger evolutionary clade or its ecological functional groups. We cultured eight species of haptophytes, including five strains of Emiliania huxleyi, for analysis via high performance liquid chromatography–high resolution accurate mass–mass spectrometry (HPLC–HRAM–MS), and performed untargeted computational and hierarchical cluster analyses on their lipidomes. We identified similarities and differences in lipidomes along both evolutionary and ecological lines, and identified potential biomarkers for haptophyte sub-clades, including 38 glycosphingolipids, seven betaine-like lipids, and three phosphatidyl-S,S-dimethylpropanethiol (PDPT) sulfo-phospholipids. We also provide the first evidence for the glycolipid, glucuronosyldiacylglycerol, in eukaryotic microalgae. We conducted a more targeted study of four haptophyte species under nitrogen- and phosphorus-limited conditions to investigate their lipidomic responses to nutrient stress. Under N- and P-limitation, the species exhibited disparate lipidomic responses. Uniquely, in response to N-limitation, E. huxleyi CCMP 374 heavily upregulated PDPT from 3.6 ± 0.9% to 10.4 ± 1.5% of quantified polar lipids. These previously uncharacterized lipidomes and responses to nutrient limitation reflect divergent evolutionary strategies and challenge popular phenotypic extrapolations between species.
    Description: This work was funded by a grant to B.A.S.V.M. from the Simons Foundation (#721229) and Gordon and Betty Moore Foundation (#5703). Support was also provided through grants to B.A.S.V.M. from the National Science Foundation (#17562524 and #2022597). Support for K.M. was provided by the U.K. Natural Environment Research Council in the form of a SPITFIRE Doctoral Training Partnership (# NE/L002531/1).
    Keywords: Betaine lipids ; Coccolithophore ; Haptophyte ; Polar lipids ; Nutrient limitation ; Phospholipids ; Phytoplankton ; Triacylglycerols
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  • 171
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Bernhard, A. E., Beltz, J., Giblin, A. E., & Roberts, B. J. Biogeography of ammonia oxidizers in New England and Gulf of Mexico salt marshes and the potential importance of comammox. ISME Communications, 1, (2021): 9, https://doi.org/10.1038./s43705-021-00008-0
    Description: Few studies have focused on broad scale biogeographic patterns of ammonia oxidizers in coastal systems, yet understanding the processes that govern them is paramount to understanding the mechanisms that drive biodiversity, and ultimately impact ecosystem processes. Here we present a meta-analysis of 16 years of data of ammonia oxidizer abundance, diversity, and activity in New England (NE) salt marshes and 5 years of data from marshes in the Gulf of Mexico (GoM). Potential nitrification rates were more than 80x higher in GoM compared to NE marshes. However, nitrifier abundances varied between regions, with ammonia-oxidizing archaea (AOA) and comammox bacteria significantly greater in GoM, while ammonia-oxidizing bacteria (AOB) were more than 20x higher in NE than GoM. Total bacterial 16S rRNA genes were also significantly greater in GoM marshes. Correlation analyses of rates and abundance suggest that AOA and comammox are more important in GoM marshes, whereas AOB are more important in NE marshes. Furthermore, ratios of nitrifiers to total bacteria in NE were as much as 80x higher than in the GoM, suggesting differences in the relative importance of nitrifiers between these systems. Communities of AOA and AOB were also significantly different between the two regions, based on amoA sequences and DNA fingerprints (terminal restriction fragment length polymorphism). Differences in rates and abundances may be due to differences in salinity, temperature, and N loading between the regions, and suggest significantly different N cycling dynamics in GoM and NE marshes that are likely driven by strong environmental differences between the regions.
    Description: This research was made possible by grants from The Gulf of Mexico Research Initiative to the Coastal Waters Consortium (CWC) to A.E.B., A.E.G., and B.J.R. Additional funding to A.E.B. came from the National Science Foundation awards MCB-0457183 and DEB-0814586. The funders had no role in the design, execution, or analyses of this project. Data are publicly available through the Gulf of Mexico Research Initiative Information & Data Cooperative (GRIIDC) at https://doi.org/10.7266/N7T43R0G (GoM gene abundance 2012), https://doi.org/10.7266/N7WH2MXZ (GoM AOA TRFLP 2012), N7RR1W6N (GoM AOB TRFLP 2012), https://doi.org/10.7266/N7X63JVT (GoM gene abundance 2013), https://doi.org/10.7266/N7SF2T4H (GoM AOB TRFLP 2013), https://doi.org/10.7266/N7NP22D5 (GoM AOA TRFLP 2013), https://doi.org/10.7266/N7D50JXK (GoM gene abundance 2014), https://doi.org/10.7266/N78C9T6Q (GoM AOB TRFLP 2014), https://doi.org/10.7266/N74M92HT (GoM AOA TRFLP 2014), https://doi.org/10.7266/N7319SXQ (GoM gene abundance 2015–2016), https://doi.org/10.7266/N7Z899FT (GoM AOB TRFLP 2015–2016), https://doi.org/10.7266/N7TH8JQ3 (GoM AOA TRFLP 2015–2016), https://doi.org/10.7266/N70Z715C (GoM 2012 nitrification rates and sediment characteristics), https://doi.org/10.7266/N7Z31WJF (GoM 2013–2014 nitrification rates and sediment characteristics), https://doi.org/10.7266/N7-0SVP-NN22 (GoM 2015–2016 nitrification rates and sediment characteristics), https://doi.org/10.7266/N7-MJPN-EQ50 (NE gene abundance, rates, and sediment chemistry), https://doi.org/10.7266/N7-QSRR-0A74 (NE AOB TRFLP), https://doi.org/10.7266/N7-4FSS-EK19 (NE AOA TRFLP). Sediment chemistry data from PIE marshes is available at https://pie-lter.ecosystems.mbl.edu/data.
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  • 172
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Laurinavicius, A., Rasmusson, A., Plancoulaine, B., Shribak, M., & Levenson, R. Machine-learning-based evaluation of intratumoral heterogeneity and tumor-stroma interface for clinical guidance. American Journal of Pathology, 191(10), (2021): 1724–1731, https://doi.org/10.1016/j.ajpath.2021.04.008.
    Description: Assessment of intratumoral heterogeneity and tumor-host interaction within the tumor microenvironment is becoming increasingly important for innovative cancer therapy decisions because of the unique information it can generate about the state of the disease. However, its assessment and quantification are limited by ambiguous definitions of the tumor-host interface and by human cognitive capacity in current pathology practice. Advances in machine learning and artificial intelligence have opened the field of digital pathology to novel tissue image analytics and feature extraction for generation of high-capacity computational disease management models. A particular benefit is expected from machine-learning applications that can perform extraction and quantification of subvisual features of both intratumoral heterogeneity and tumor microenvironment aspects. These methods generate information about cancer cell subpopulation heterogeneity, potential tumor-host interactions, and tissue microarchitecture, derived from morphologically resolved content using both explicit and implicit features. Several studies have achieved promising diagnostic, prognostic, and predictive artificial intelligence models that often outperform current clinical and pathology criteria. However, further effort is needed for clinical adoption of such methods through development of standardizable high-capacity workflows and proper validation studies.
    Description: Supported by the European Social Fund grant 09.3.3-LMT-K-712.
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  • 173
    Publication Date: 2022-11-18
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Wiebe, P., Baumgartner, M., Copley, N., Lawson, G., Davis, C., Ji, R., & Greene, C. Does predation control the diapausing stock of Calanus finmarchicus in the Gulf of Maine? Progress In Oceanography, 206, (2022): 102861, https://doi.org/10.1016/j.pocean.2022.102861.
    Description: The variability of zooplankton populations is controlled by external and internal forcing, with the former being principally large-scale changes in circulation, and the latter being driven by in situ growth, competition, and predation. Assessing the relative importance of these forcings is challenging and requires analyses of multifaceted observational data. As part of the U.S. GLOBEC Georges Bank program, a series of cruises were conducted in fall 1997, 1998, and 1999 to survey diapausing populations of Calanus finmarchicus and their predators in Wilkinson, Jordan, and Georges Basins of the Gulf of Maine. Station and underway sampling were conducted using net (1 m2 MOCNESS) and bioacoustic (BIOMAPER-II) systems, respectively, to acquire vertically stratified data for zooplankton biomass, taxonomic, size, and life-stage composition, together with associated environmental data. The results show that the autumn diapausing C. finmarchicus abundance was much lower in 1998 than in 1997 or 1999, even though the overall zooplankton biomass levels were comparable between the three years. The size frequency distribution of the diapausing individuals had a bi-modal pattern in 1997 and 1999, but a single mode in 1998, indicating the demise of an early cohort of the diapausing stock. The relative biomass and computed energy demand of potential invertebrate predators (euphausiids, decapods, medusae, and siphonophores) was found to be higher in 1998 and could account for the missing C. finmarchicus cohort. Evidence collected from this study supports the hypothesis that local predation has the potential to control the diapausing stock of C. finmarchicus in the Gulf of Maine.
    Description: RJ received support from the Northeast US Shelf Long Term Ecological Research (NES-LTER) project (NSF OCE-1655686) and the US MBON Gulf of Maine project to NERACOOS (NOPP award NA19NOS0120197 and BOEMUMaine Cooperative Agreement M19AC00022) for analyzing the size data and working on the manuscript. Research support was provided by the US GLOBEC Georges Bank Program through the CILER Cooperative Agreement NA-67RJO148 (NOAA Coastal Ocean Program).
    Keywords: Gulf of Maine ; Calanus finmarchicus ; Fall abundance variability ; Calanus C5 size variability ; Predation control
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  • 174
    Publication Date: 2022-10-26
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Zhang, F., Lin, J., Zhou, Z., Yang, H., & Morgan, J. P. Mechanism of progressive broad deformation from oceanic transform valley to off-transform faulting and rifting. Innovation, 3(1), (2022): 100193, https://doi.org/10.1016/j.xinn.2021.100193.
    Description: Oceanic transform faults (TFs) are commonly viewed as single, narrow strike-slip seismic faults that offset two mid-ocean ridge segments. However, broad zones of complex deformation are ubiquitous at TFs. Here, we propose a new conceptual model for the progressive deformation within broad zones at oceanic TFs through detailed morphological, seismic, and stress analyses. We argue that, under across-transform extension due to a change in plate motion, plate deformation occurs first along high-angle transtensional faults (TTFs) within the transform valleys. Off-transform normal faults (ONFs) form when across-transform deviatoric extensional stresses exceed the yield strength of the adjacent oceanic lithosphere. With further extension, these normal faults can develop into off-transform rift zones (ORZs), some of which can further develop into transform plate boundaries. We illustrate that such progressive complex deformation is an inherent feature of oceanic TFs. The new conceptual model provides a unifying theory to explain the observed broad deformation at global transform systems.
    Description: We benefited from discussions with Drs. Tao Zhang, Huihui Weng, Yen Joe Tan, the SCSIO Deep Ocean Geodynamics Group, the CUHK Seismology Group, and the participants of the InterRidge transform fault workshop in France, 2018. This work was supported by the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) (GML2019ZD0205), NSFC grants (41976064, 41890813, 41976066, 91628301, and 91858207), CAS grants (Y4SL021001, QYZDY-SSW-DQC005, 133244KYSB20180029, 131551KYSB20200021, and ISEE2021PY03), National Key R&D Program of China grants (2018YFC0309800 and 2018YFC0310105), the Guangdong Basic and Applied Basic Research Foundation (2021A1515012227), and Hong Kong Research Grant Council grants (14304820 and 14306119).
    Keywords: Transform fault deformation ; Off-transform faulting and rifting ; Plate rotation ; Transtensional fault ; Ridge-transform interaction
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  • 175
    Publication Date: 2022-10-28
    Description: Katla is a threatening volcano in Iceland, partly covered by the M\'yrdalsj\"okull ice cap. The volcano has a large caldera with several active geothermal areas. A peculiar cluster of long-period seismic events started on Katla's south flank in July 2011, during an unrest episode in the caldera that culminated in a glacier outburst. The seismic events were tightly clustered at shallow depth in the Gvendarfell area, 4 km south of the caldera, under a small glacier stream on the southern margin of M\'yrdalsj\"okull. No seismic events were known to have occurred in this area before. The most striking feature of this seismic cluster is its temporal pattern, characterized by regular intervals between repeating seismic events, modulated by a seasonal variation. Remarkable is also the stability of both the time and waveform features over a long time period, around 3.5 years. No comparable examples have been found in the literature. Both volcanic and glacial processes can produce similar waveforms and therefore have to be considered as potential seismic sources. Discerning between these two causes is critical for monitoring glacier-clad volcanoes and has been controversial at Katla. For this new seismic cluster on the south flank we regard volcano-related processes as more likely than glacial ones for the following reasons: 1) the seismic activity started during an unrest episode involving sudden melting of the glacier and a j\"okulhlaup; 2) the glacier stream is small and stagnant; 3) the seismicity remains regular and stable for years; 4) there is no apparent correlation with short-term weather changes, such as rain storms. We suggest that a small, shallow hydrothermal system was activated on Katla's south flank in 2011, either by a minor magmatic injection or by changes of permeability in a local crack system.
    Description: Published
    Description: 28-40
    Description: 3T. Fisica dei terremoti e Sorgente Sismica
    Description: JCR Journal
    Keywords: Physics - Geophysics; Physics - Geophysics
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 176
    Publication Date: 2022-09-15
    Description: We have mapped and constrained the timing of tectonically deformed uplifted Late Quaternary palaeoshorelines in the Messina Strait, southern Italy, an area above a subduction zone containing active normal faults. The palaeoshorelines are preserved from up to thirteen Late Quaternary sea-level highstands, providing a record of the deformation over this timescale (~500 ka) for the Messina-Taormina Fault, the Reggio Calabria Fault and the Armo Fault. The palaeoshorelines reveal spatial patterns of uplift through time along the strike of these normal faults, and, given the across strike arrangement of the faults, also reveal how the contribution of each fault to the regional strain-rate progressed through time. The results reveal that the uplift rates mapped within the fault hangingwalls and footwalls were not constant through time, with a marked change in the location of strain accumulation at ~50 ka. The uplift rates, once converted into throw-rates, imply that the three faults comprised similar throw-rates prior to ~50 ka (in the range 0.77–0.96 mm/yr), with the Armo and Reggio Calabria faults then switching to lower rates (0.32 mm/yr and 0.33 mm/yr respectively), whilst the Messina-Taormina Fault accelerated to 2.34 mm/yr. The regional extension rate, gained by summing the implied heave rates across the three faults, was maintained through time despite this re-organisation of local strain accumulation at ~50 ka. We explain these out-of-phase fault throw-rate changes during the constant-rate regional extension conditions as due to interactions between these upper plate normal faults. We finally discuss how fault throw-rates changing through time may affect a long-term seismic hazard assessment within active normal fault systems.
    Description: Published
    Description: 105432
    Description: 2T. Deformazione crostale attiva
    Description: JCR Journal
    Keywords: Crustal Deformation ; Active Faults ; Marine terraces ; Uplift ; 04.04. Geology ; 04.07. Tectonophysics
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 177
    Publication Date: 2022-09-15
    Description: Innovations in virtual reality (VR) technology have led to exciting possibilities in teaching earth sciences, allowing students to experience complex geological sites that, due to cost and logistical reasons, they would not normally be able to experience. The need for high quality online digital learning resources and blended learning was brought to the forefront during the SARS-CoV-2 pandemic, as courses with a traditional physical field work component were forced to move online and provide alternatives to students. While it is unlikely that virtual field trips (VFT) would be accepted by students as a replacement of real-world fieldwork moving out of the pandemic, research shows promise that using IVR experiences can lead to enhanced learning outcomes in geosciences, warranting its inclusion on the curricula. This paper presents the outputs of a project to improve student learning in complex geological environments using VR. Here we outline a workflow that was developed to collect high resolution imagery using remote sensing to create digital outcrop models (DOM) of complex geological sites. Using this framework, this paper will then explore the use of VR for an investigation of the Husavik Triple Junction, a complex structural site in northern Iceland, explaining how the drone data was converted to a 3D DOM and demonstrating how VR can be used to simulate real world field mapping. Finally, we describe how these IVR activities have been integrated into taught modules at postgraduate level and discuss how the use of IVR experiences can complement existing geoscience curriculum design.
    Description: Erasmus+ Key Action 2 funded project 2017-1-UK01-KA203-036719 3DTeLC-Bringing the 3Dworld into the classroom: a new approach to Teaching, Learning and Communicating the science of geohazards in terrestrial and marine environments coordinated by M. Whitworth. (https://ec.europa.eu/programmes/erasmus-plus/projects/eplus-projectdetails/#project/2017-1-UK01-KA203-036719and http://www.3dtelc.com) and the MIUR Project ACPR15T4_00098–Argo3D, coordinated by A. Tibaldi (http://argo3d.unimib.it/).
    Description: Published
    Description: 104681
    Description: 1TM. Formazione
    Description: JCR Journal
    Keywords: Virtual reality ; Geosciences ; Teaching ; Fieldwork ; Structural geology ; Digital outcrop model ; 05.04. Instrumentation and techniques of general interest ; 04.04. Geology ; 05.03. Educational, History of Science, Public Issues
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 178
    Publication Date: 2022-09-30
    Description: Mud volcanoes are rapidly-evolving geological phenomena characterized by the surface expulsion of sediments and fluids from over-pressurized underlying reservoirs. We investigate the Nirano Mud Volcano, Northern Italy, with seismic methods to better understand the dynamic evolution of the system and shed light on its subsurface structure. Our study allowed to detect and characterize three different types of high-frequency drumbeat signals that are present in the most active part of the mud volcano plumbing system. With a back-projection method based on the cross-correlation envelope of signals recorded at different station pairs, we can determine the source location of the drumbeats. These coincide with the location of V/H (vertical-to-horizontal) amplitude peaks obtained from an ambient vibration profile and resistivity anomalies identified in a previous study. We observe that the drumbeats are P-wave dominated signals, with characteristics similar to those found in magmatic settings, i.e. LPs (long-period signals). We suggest that such tremors originate from the migration of mud and gas inside the mud volcanic conduits. The source location, waveform and frequency content of the drumbeats evolve over time. We found that drumbeat occurrence is directly linked with morphological changes at surface.
    Description: Published
    Description: 107619
    Description: 7A. Geofisica per il monitoraggio ambientale
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 179
    Publication Date: 2022-10-10
    Description: There are three classes of geothermometers and fCO2-indicators (collectively known as geoindicators): the traditional or classical ones, the theoretical activity-based geoindicators, and multicomponent chemical geothermometry. Most traditional geothermometers (e.g., SiO2, Nasingle bondK, Na-K-Ca, Ksingle bondMg) are linear functions linking the logarithm of the equilibrium constant of the controlling reaction to the absolute temperature reciprocal. Total concentrations are considered in most traditional geothermometers. Thanks to these two characteristics, the traditional geothermometers are simple to be used, which explains their widespread use. However, there are at least two issues which have been disregarded or not properly considered in the derivation of traditional geothermometers. One is that total concentrations of relevant solutes can deviate considerably from the activities of the aqueous species participating to the controlling mineral-solution reactions due to the formation of aqueous complexes. The other concerns the hydrothermal minerals, with some having variable composition and adularia being affected by Alsingle bondSi order-disorder on the tetrahedral sites. To overcome these two issues, theoretical activity-based geoindicators were recently proposed. To use these geoindicators is necessary to run a speciation program, but computed temperatures and CO2 fugacities are more reliable than those given by traditional geoindicators and additional information is obtained on the hydrothermal minerals present in the geothermal aquifer. Multicomponent chemical geothermometry consists in simulating the heating of the aqueous solution of interest from the P-T conditions present at the surface to those occurring in the geothermal aquifer. Both multicomponent chemical geothermometry and theoretical activity-based geoindicators call for the use of a suitable computer code and an internally consistent thermodynamic database. It would be desirable for the database to be shared, accepted and used by the entire scientific community.
    Description: Published
    Description: 107097
    Description: 1TR. Georisorse
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 180
    Publication Date: 2022-10-28
    Description: A representative fluid sampling of surface geothermal manifestations and its analytical data quality assurance and quality control (QA/QC) are challenging aspects of understanding the geothermal reservoir processes. To achieve these goals, an interlaboratory test for the chemical analyses of ten water samples: one synthetic water, two lake waters (i.e., duplicated), one stream water, and six water samples from two geothermal wells of Los Azufres Geothermal field (LAGF), Michoacan, Mexico, was conducted. The geothermal wells were sampled at four points: (1) total discharge of condensed fluid at the wellhead, (2) separate liquid condensed in the well separator, (3) flushed liquid at the weir box, and (4) separated vapor condensed at the well-separator (data taken from Verma et al., 2022). Sixteen laboratories from ten countries reported their results. The pH, electrical conductivity, Ca2+, Li+, SO4 2 B, and Si-total measurements were 8.35 ± 0.04, 12.25 ± 0.53 mS/cm, 25 ± 1 mg/l, 18 ± 1 mg/l, 569 ± 33 mg/l, 320 ± 21 mg/l, and 20.5 ± 0.7 mg/l, which are close to the conventional true values, 8.40, 12.31 mS/cm, 23 mg/l, 19 mg/l, 647 mg/l, 330 mg/l, and 20.0 mg/l, respectively. Analytical errors for major ions, Na+, Cl
    Description: Published
    Description: 105477
    Description: 2IT. Laboratori analitici e sperimentali
    Description: JCR Journal
    Keywords: Geothermal water ; Inter-laboratory test ; Geothermal system ; Los Azufres ; Geochemical modeling ; Uncertainty propagation ; NIST Uncertainty machine ; 05.04. Instrumentation and techniques of general interest
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 181
    Publication Date: 2022-10-24
    Description: The Earth is a dynamic planet, where earthquakes and volcanoes are among some of its most outstanding expressions. Just like our planet as a whole is subject to lunisolar gravitational tides, seismic and volcanic activity are also influenced by the relative motion of the Sun and Moon. This tidal influence takes different forms, spanning different spatial and temporal scales, from quasiperiodic patterns with semidiurnal to multiannual periods to the triggering of earthquakes and volcanic eruptions. Tidal stresses have been primarily evoked as driving forces, although they are 3–5 orders of magnitude smaller than tectonic stresses, which makes cause-effect relationships elusive. This chapter reviews the different observations of tidal influence in geophysical and geochemical data acquired in tectonic and volcanic settings, as well as the methods that have been developed to detect it. Using case studies, we provide some insights on the sensitivity of geological systems to tidal stresses.
    Description: Published
    Description: 333-364
    Description: 4V. Processi pre-eruttivi
    Keywords: Volcanic activity ; Seismic activity ; Solid Earth and ocean tides ; External forcing ; Tidal triggering ; 04. Solid Earth
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: book chapter
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  • 182
    Publication Date: 2022-10-24
    Description: The Antarctic and Arctic regions are Earth’s open windows to outer space. They provide unique opportunities for investigating the troposphere–thermosphere–ionosphere–plasmasphere system at high latitudes, which is not as well understood as the mid- and low-latitude regions mainly due to the paucity of experimental observations. In addition, different neutral and ionised atmospheric layers at high latitudes are much more variable compared to lower latitudes, and their variability is due to mechanisms not yet fully understood. Fortunately, in this new millennium the observing infrastructure in Antarctica and the Arctic has been growing, thus providing scientists with new opportunities to advance our knowledge on the polar atmosphere and geospace. This review shows that it is of paramount importance to perform integrated, multi-disciplinary research, making use of long-term multi-instrument observations combined with ad hoc measurement campaigns to improve our capability of investigating atmospheric dynamics in the polar regions from the troposphere up to the plasmasphere, as well as the coupling between atmospheric layers. Starting from the state of the art of understanding the polar atmosphere, our survey outlines the roadmap for enhancing scientific investigation of its physical mechanisms and dynamics through the full exploitation of the available infrastructures for radio-based environmental monitoring.
    Description: Published
    Description: 1609–1698
    Description: 2A. Fisica dell'alta atmosfera
    Description: 5A. Ricerche polari e paleoclima
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 183
    Publication Date: 2022-10-28
    Description: A 23 hour tremor burst was recorded on July 8-9th 2011 at the Katla subglacial volcano, one of the most active and hazardous volcanoes in Iceland. This was associated with deepening of cauldrons on the ice cap and a glacial flood that caused damage to infrastructure. Increased earthquake activity within the caldera started a few days before and lasted for months afterwards and new seismic activity started on the south flank. No visible eruption broke the ice and the question arose as to whether this episode relates to a minor subglacial eruption with the tremor being generated by volcanic processes, or by the flood. The tremor signal consisted of bursts with varying amplitude and duration. We have identified and described three different tremor phases, based on amplitude and frequency features. A tremor phase associated with the flood was recorded only at stations closest to the river that flooded, correlating in time with rising water level observed at gauging stations. Using back-projection of double cross-correlations, two other phases have been located near the active ice cauldrons and are interpreted to be caused by volcanic or hydrothermal processes. The greatly increased seismicity and evidence of rapid melting of the glacier may be explained by a minor sub-glacial eruption. It is also plausible that the tremor was generated by hydrothermal boiling and/or explosions with no magma involved. This may have been induced by pressure drop triggered by the release of water when the glacial flood started. All interpretations require an increase of heat released by the volcano.
    Description: Published
    Description: 63-78
    Description: 3T. Fisica dei terremoti e Sorgente Sismica
    Description: 2V. Struttura e sistema di alimentazione dei vulcani
    Description: JCR Journal
    Keywords: Physics - Geophysics; Physics - Geophysics
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 184
    Publication Date: 2022-10-24
    Description: Scintillations are caused by ionospheric irregularities and can affect the propagation of trans-ionospheric radio signals. One way to understand and predict the impact of such irregularities on Global Navigation Satellite System (GNSS) signals is through the spatial/temporal characterization of the scintillation’s climatology during different phases of a solar cycle covering different latitudes and longitudes. This characterization is performed using amplitude scintillation index S4, during the full solar cycle 24, in the South American (SA) sector. The investigation considers the diurnal, daily, and seasonal variation of S4 index for climatological purpose, and the goal of this study is to investigate the scintillations covering a large spatial scale during the full solar cycle 24. The characterization shows a latitudinal asymmetry, whereas at the south, the scintillations were more frequent and their peak was more distant from the magnetic equator, which can be attributed by the South Atlantic Magnetic Anomaly (SAMA), and/or by the transequatorial meridional neutral winds. It also shows a longitudinal asymmetry, where the scintillations at the eastern sector occurred between November and February, while at the western sector, they occurred during the months of October, November, February and March, which can be attributed to the difference between the magnetic and geographic equators. The occurrence of scintillations during two distinct geomagnetic storms with similar storm time in the SA sector is also presented.
    Description: Published
    Description: 105872
    Description: 2A. Fisica dell'alta atmosfera
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 185
    Publication Date: 2022-11-03
    Description: This paper presents new chemical and isotopic data on gases from deep oil and gas fields, bubbling gases, dissolved gases in groundwaters and dry seeps of the Southern Po River Basin (Emilia-Romagna, Italy), aiming to (i) characterize and differentiate the various types of deep natural gases; (ii) identify the source(s) of methane and light hydrocarbons in shallow aquifers and surface gas-rich emissions; (iii) propose a conceptual model of natural fluid migration pathways in the sedimentary prism of the Southern Po River Basin. Based on the isotopic composition of CH4 and C2–C4 n-alkanes, CH4/(C2H6+C3H8) ratio, relative proportion of the C7 hydrocarbons and relative concentration of cyclic compounds with respect to the total cyclic abundance, three main deep reservoirs of hydrocarbons are identified in the subsurface of the Southern Po River Basin: (1) microbial gas hosted in Pliocene-Pleistocene marine sediments, (2) thermogenic gas hosted in Miocene deposits and (3) thermogenic gas produced in Triassic carbonates. Helium isotopes of these deep fluids indicate an almost pure crustal origin (Rc/Ra values = 0.014–0.04), with negligible contributions from mantle-derived helium. A variable contribution of atmosphere-derived fluids is highlighted by low 4He/20Ne (down to 5.42) and 40Ar/36Ar (≤319.5) values. Comparison of chemical and isotopic signatures of deep and surficial hydrocarbon occurrences suggests that methane in shallow groundwaters or gas seeps is sourced by microbial gas migrating upward from deep Plio-Pleistocene reservoirs, with no detectable contributions of Triassic or Miocene thermogenic hydrocarbons. At shallow depths (roughly around 20–50 m.b.g.l.), Plio-Pleistocene microbial methane appears to be mainly stored in anoxic aquifers. However, where CH4 further migrates upwards and reaches aerobic environments (e.g., aquifers or soils), it readily undergoes a process of exothermic microbial oxidation mediated by methanotrophic bacteria. Where the structural architecture of the sedimentary sequence favors the migration of fluids, the methanotrophic biofilter is bypassed and CH4 is discharged through soil diffuse degassing or gas bubbling at water wells. We argue that microbial consumption might be able to bio-sequester significant amounts of Plio-Pleistocene deep-sourced methane in the form of CO2 and biomass. Such process might be widespread in the subsurface of the Southern Po River Basin and, possibly, in other foreland basins worldwide.
    Description: Published
    Description: 105981
    Description: 9T. Geochimica dei fluidi applicata allo studio e al monitoraggio di aree sismiche
    Description: JCR Journal
    Keywords: Methane ; Po river basin ; Emilia-romagna region ; Natural gas geochemistry ; Hydrocarbon source rocks ; Gas accumulation and migration ; Thermogenic gas ; Microbial gas
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 186
    Publication Date: 2022-11-22
    Description: To refine knowledge about terrace phases and uplift history for a tectonically poor deformed region, we apply the synchronous correlation method to reconstruct the chronology of a poorly constrained sequence of raised palaeoshorelines on the Apulian foreland, southern Italy. This work uses new chronological constraints obtained by amino acid racemisation (AAR) and isoleucine/alloisoleucine epimerisation (IE) on Patella spp., Thetystrombus latus (Gmelin), Glycymeris sp., and ostracods and U-series dating on corals Hoplangia durotrix Gosse and Cladocora caespitosa Linneo. This procedure provides a quantitative estimate of the vertical movements and associated rates within a region of the Apulian foreland. The synchronous correlation method uses sea-level highstands and uplift rate(s) as inputs; in particular, for sea-level highstands, the inputs are the age of the highstands and the sea-level elevation of the highstands relative to the present-day sea level. The output is a set of currently expected elevations of each sea-level highstand (the present elevations of palaeoshorelines). We then used regression analysis to assess the robustness between our observed palaeoshorelines and expected elevations of sea-level highstands. Our results show that the best fitting scenario is obtained using the sea-level curves of (i) Waelbroeck et al. (2002) from present to 410 ky BP and (ii) Rohling et al. (2014) from 410 to 590 ky BP as inputs for our synchronous correlation method, with uplift rates ranging from 0.09 mm/y to 0.07 mm/y with a mean value of 0.08 mm/y from 590 ky BP onwards. We recognised palaeoshorelines in the field belonging to the following highstands: 120 ky BP (MIS 5.5, second peak), 127 ky BP (MIS 5.5, first peak), 212 ky BP (MIS 7.3), 330 ky BP (MIS 9.3), 410 (MIS 11), 525 ky BP (MIS 13.3), and 590 ky BP (MIS 15). Our results show field observations of the reoccupation effect of younger palaeoshorelines over older ones due to the relatively slow uplift rates measured in the investigated area as predicted by our synchronous correlation method. In particular, we show a well-mapped and described reoccupation of the MIS 5.5 palaeoshoreline over the MIS 7.3 palaeoshoreline, constrained by new absolute dating. In addition, the data from the Apulian foreland suggest an MIS 7.3 highstand close to the present sea level.
    Description: Published
    Description: 108530
    Description: 2T. Deformazione crostale attiva
    Description: JCR Journal
    Keywords: Crustal Deformation ; Uplift ; Marine terraces ; Absolute dating ; 04.04. Geology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 187
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    Unknown
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    In:  In: World Atlas of Submarine Gas Hydrates in Continental Margins. , ed. by Mienert, J., Berndt, C. 〈https://orcid.org/0000-0001-5055-0180〉, Tréhu, A. M., Camerlenghi, A. and Liu, C. S. Springer, Cham, pp. 451-461.
    Publication Date: 2022-01-06
    Description: The Black Sea has undergone several limnic and marine stages due to fluctuations in the global sea level. The exchange of saline water from the Mediterranean Sea to the Black Sea through the Bosporus Strait was interrupted when the sea level dropped below the Bosporus sill. This induced limnic conditions, while marine conditions were established after the reconnection to saline Mediterranean seawater. Extended river fan systems developed during sea level low-stands, providing large amounts of organic material being buried by rapid sedimentation on the slopes of the Black Sea margins. The biogenic degradation of this material produces most of the methane gas expelled into the anoxic water column today. This largely happens by ubiquitous cold vents at ~700 m water depth (i.e. at the stability boundary of methane hydrates) and by mud volcanoes in ~2000 m water depth. A significant amount of gas is expected to accumulate in the sediment within the methane hydrate stability zone. However, bottom-simulating reflectors, the seismic indicator for gas hydrates, are not found everywhere along the margin. Recent analyses of the Danube and Dniepr fans have revealed a discontinuous gas hydrate formation in an area with no active seeps, while areas of active seepage located in the vicinity of BSR reflections held no gas hydrates. In addition, the ongoing diffusion of salt into the uppermost Black Sea sediment pore space since the last glacial maximum further reduces the volume of the gas hydrate stability zone. Estimates of the total amount of gas stored in gas hydrates therefore require a detailed structural analysis prior to regional- or basin-scale modelling attempts.
    Type: Book chapter , NonPeerReviewed
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  • 188
    facet.materialart.
    Unknown
    Springer
    In:  In: World Atlas of Submarine Gas Hydrates in Continental Margins. , ed. by Mienert, J., Berndt, C. 〈https://orcid.org/0000-0001-5055-0180〉, Tréhu, A. M., Camerlenghi, A. and Liu, C. S. Springer, Cham, pp. 73-85.
    Publication Date: 2022-01-20
    Description: Marine electromagnetic methods provide useful and independent measures for the identification and quantification of submarine gas hydrates. The resistivity of seafloor sediments, drawn from area-wide electromagnetic data, mainly depends on the sediment porosity and the nature of the pore fluid. Gas hydrates and free gas are both electrically resistive. The replacement of saline water, thus conductive pore water with resistive gas hydrate or free gas, increases the sediment resistivity and can be used to provide accurate saturation estimates if the background lithology is known. While seismic methods are predominantly used to study the distribution of submarine gas hydrates, a growing number of global field studies have demonstrated that the joint interpretation of marine seismic and electromagnetic methods improves the evaluation of submarine gas hydrate targets. This article discusses the relationship between resistivity and free gas/gas hydrate saturation levels, how the resistivity of the sediment may be measured and summarizes the status and results of current and past field studies.
    Type: Book chapter , NonPeerReviewed
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  • 189
    Publication Date: 2022-04-25
    Description: Wildfires are natural or anthropogenic phenomena increasing at alarming rates globally due to land-use alterations, droughts, climatic warming, hunting and biological invasions. Whereas wildfire effects on terrestrial ecosystems are marked and relatively well-studied, ash depositions into aquatic ecosystems have often remained overlooked but have the potential to significantly impact bottom-up processes. This study assessed ash-water-phytoplankton biomass dynamics using six plant species [i.e., three natives (apple leaf Philenoptera violacea, Transvaal milk plum Englerophytum magalismontanum, quinine tree Rauvolfia caffra) and three aliens (lantana Lantana camara, gum Eucalyptus camaldulensis, guava Psidium guajava)] based on a six-week mesocosm experiment with different ash concentrations (1 and 2 g L-1). We assessed concentrations of chemical elements, i.e., N, P, K, Ca, Mg, Na, Mn, Fe, Cu, Zn and B from ash collected, and we have observed significant differences among the species. High concentrations of P, K, Mn, Fe, Cu, Zn and B were recorded from Transvaal milk plum ash and low concentrations of P, K, Ca, Mg, Cu and Zn were recorded from apple leaf. An increase in phytoplankton biomass (using chlorophyll-a concentration as a proxy) for all treatments i.e., 1 and 2 g L-1 for all plant species ash was observed a week after, followed by decreases in the following weeks, with the exception of 2 g L-1 for lantana, gum and control. Silicate concentrations (i.e., used as a proxy for diatom abundance) showed increasing patterns among all ash treatments, with exception of controls. However, no clear patterns were observed between native and alien plant ash on both chl-a and silicate concentrations. We found that ash has notable effects on water chemistry, particularly nitrate, which increased throughout the weeks, whereas, pH and conductivity were high at low ash concentrations. The impacts of ash on water chemistry, chl-a and silicate concentrations vary with individual species and the amount of ash deposited into the system.
    Type: Article , PeerReviewed
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  • 190
    Publication Date: 2022-04-29
    Description: Every year, vast quantities of plastic debris arrive at the ocean surface. Nevertheless, our understanding of plastic movements is largely incomplete and many of the processes involved with the horizontal and vertical displacement of plastics in the ocean are still basically unknown. In this chapter we review the dynamics associated with the transport of plastics and other pollutants at oceanic fronts. Fronts had been historically defined as simple barriers to exchange, but here we show that the role of these structures in influencing the transport of plastics is more complex. The tools used to investigate the occurrence of frontal structures at various spatial scales are reviewed in detail, with a particular focus on their potential applications to the study of plastic pollution. Three selected case studies are presented to better describe the role of fronts in favoring or preventing plastic exchanges: the large-scale Antarctic Circumpolar Current, a Mediterranean mesoscale front, and the submesoscale fronts in the Gulf of Mexico. Lastly, some aspects related to the vertical subduction of plastic particles at oceanic fronts are discussed as one of the most promising frontiers for future research. The accumulation of floating debris at the sea surface is mainly affected by the horizontal components of frontal dynamics. At the same time, vertical components can be relevant for the export of neutrally buoyant particles from the surface into the deep sea. Based on these evidences, we propose that submesoscale processes can provide a fast and efficient route of plastic transport within the mixed layer, while mesoscale instabilities and associated vertical velocities might be the dominant mechanism to penetrate the deeper ocean on slower but broader scales. We conclude that given the ubiquitous presence of fronts in the world’s ocean, their contribution to the global plastic cycle is probably not negligible and the role of these processes in vertically displacing neutrally buoyant microplastics should be investigated in more detail.
    Type: Book chapter , NonPeerReviewed
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  • 191
    Publication Date: 2022-05-20
    Description: The Barents Sea, located close to the Arctic Ocean, is a petroleum province featuring an extensive occurrence of gas hydrates and shallow gas in compacted sediments. Glacial erosion and uplift have contributed to the migration of gas originating from deeper rocks to the shallow sediments of this region, resulting in hydrates with higher-order hydrocarbons in addition to methane. This article documents reported gas hydrate indications and major controls on hydrate stability in the Barents Sea.
    Type: Book chapter , PeerReviewed
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  • 192
    Publication Date: 2022-05-25
    Description: Since global navigation satellite systems (GNSS) for determining the absolute geolocation do not reach into the ocean, underwater robots typically obtain a GNSS position at the water surface and then use a combination of different sensors for estimating their pose while diving, including inertial navigation, acoustic doppler velocity logs, ultra short baseline localization systems and pressure sensors. When re-navigating to the same seafloor location after several days, months or years, e.g. for coastal monitoring, the absolute uncertainty of such systems can be in the range of meters for shallow water, and tens of meters for deeper waters in practice. To enable absolute relocalization in marine data science applications that require absolute seafloor positions in the range of centimeter precision, in this contribution we suggest to equip the monitoring area with visual markers that can be detected reliably even in case they are partially overgrown or partially buried by sediment, which can happen quickly in coastal waters. Inspired by patterns successful in camera calibration, we create robust markers that exhibit features at different scales, in order to allow detection, identification and pose estimation from different cameras and various altitudes as visibility (and therefore the maximum possible survey altitude) in coastal waters can vary significantly across seasons, tides and weather. The low frequency content of the marker resembles a human-readable digit, in order to allow easy identification by scientists. We present early results including promising initial tests in coastal waters.
    Type: Book chapter , NonPeerReviewed
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  • 193
    Publication Date: 2022-06-02
    Description: While offshore groundwater has been utilized by coastal communities as far back as 1000 BC, only in the past 10 years has the global volume of fresh-to-brackish water hosted in offshore aquifers been truly appreciated. There are vast quantities (~300–500 × 103 km3) of offshore freshened groundwater sequestered in continental shelf sediments under water depths of less than 60 m within 110 km of the coastline. New marine geophysical methods now make it possible to map and quantify low salinity offshore groundwater bodies. To date, these offshore resources have not been developed. Offshore freshened groundwater could be produced if wells are located close to the shoreline and coastal desalination plants.
    Type: Book chapter , NonPeerReviewed
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  • 194
    Publication Date: 2022-07-11
    Description: Underwater images are challenging for correspondence search algorithms, which are traditionally designed based on images captured in air and under uniform illumination. In water however, medium interactions have a much higher impact on the light propagation. Absorption and scattering cause wavelength- and distance-dependent color distortion, blurring and contrast reductions. For deeper or turbid waters, artificial illumination is required that usually moves rigidly with the camera and thus increases the appearance differences of the same seafloor spot in different images. Correspondence search, e.g. using image features, is however a core task in underwater visual navigation employed in seafloor surveys and is also required for 3D reconstruction, image retrieval and object detection. For underwater images, it has to be robust against the challenging imaging conditions to avoid decreased accuracy or even failure of computer vision algorithms. However, explicitly taking underwater nuisances into account during the feature extraction and matching process is challenging. On the other hand, learned feature extraction models achieved high performance in many in-air problems in recent years. Hence we investigate, how such a learned robust feature model, D2Net, can be applied to the underwater environment and particularly look into the issue of cross domain transfer learning as a strategy to deal with the lack of annotated underwater training data.
    Type: Book chapter , NonPeerReviewed
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  • 195
    Publication Date: 2022-07-22
    Description: Phytoplankton form the base of the pelagic food web in inland waters. Unlike rooted plants with access to nutrients in the sediment, phytoplankton depend on the open water as their sole direct source of minerals. Phytoplankton comprise cyanobacteria and phylogenetically diverse eukaryotic algae that convert light energy and mineral nutrients into organic matter. Many species also exploit the elements and energy within dissolved organic compounds and particles produced in the catchment or within the water. Here, we describe the nutrient requirements of phytoplankton, their different modes of nutrition, the mechanisms they employ to acquire nutrients and the ecological consequences of their varying ability to exploit an often scarce and spatially and temporally variable resource. When nutrients are abundant, often as a result of human disruption of nutrient cycles, phytoplankton productivity, and often biomass, increases to the point that it causes a range of ecological consequences that reduce the value of the water resource for mankind.
    Type: Book chapter , NonPeerReviewed
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  • 196
    Publication Date: 2022-08-08
    Description: Fish food is an inevitable item in human consumption with healthy sourceof good quality proteins and fat. Aqua industry can help to improve food security,livelihoods for the poorest and to meet the world’s food demands. But producingmore seafood that is at affordable cost with rich nutrition is challenging for aquaindustry. Many factors affect the productivity of aqua industry; one such an impor-tant constraint is bacterial diseases. Hence, Aqua industry, a booming businesssector, immensely requires continued research with scientific and technical devel-opments, and innovations. Study of bacterialfish disease is one such thrust areawhich requires intense research to understand the causes and control bacterialdiseases infish. The appearance and development of afish disease is the result ofthe interaction among pathogen, host and environment. An insight into bacterialfishdiseases, clinical symptoms and treatment may help to manage the bacterial diseasesand so can make aqua industry a more profitablefield. This chapter deals withdifferent aspects of the most threatening bacterial diseases, occurring in farmedfishes and also in wildfishes, which are results infish loss and economic lossworldwide. A wide range of gram positive and gram-negative bacteria causingbacterial diseases, clinical symptoms, diagnosis, treatment, vaccines and the natureof water habitat are also discussed in this chapter.
    Type: Book chapter , NonPeerReviewed
    Format: text
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  • 197
    Publication Date: 2022-08-12
    Description: The Digital Earth project aimed for the integration of data science and Earth science. Here, we reflect on the main lessons learned that include the need for interdisciplinary collaboration, thinking out of the box, the concept of ‘thinking in workflows’ and models for the sustainable implementation of scientific software, data infrastructure and policies.
    Type: Book chapter , NonPeerReviewed
    Format: text
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  • 198
    Publication Date: 2022-08-12
    Description: Digital Earth is a project funded by the German Helmholtz Association with all centers of the research field Earth and Environment involved. The main goal of the Digital Earth project is to develop and bundle data science methods in extendable and maintainable scientific workflows that enable natural scientists in collaboration with data scientists to achieve a deeper understanding of the Earth system. This has been achieved by developing solutions for data analysis and exploration with visual and computational approaches with data obtained in a SMART monitoring approach and modeling studies, accompanied by a continuous evaluation of the collaboration processes. In this chapter, the history, setup, and focus of the Digital Earth project are described.
    Type: Book chapter , NonPeerReviewed
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  • 199
    Publication Date: 2022-08-17
    Description: The Digital Earth project aims at a strong interrelation between Data and Earth Science and a step-change in implementing data science methods within Earth science research. During the project, the progress of interdisciplinary collaboration and adoption of data science methods has been measured and assessed with the goal to trace the success of the project. This chapter provides the set-up of this evaluation and the results from two online questionnaires that were held after the start and before the end of the project.
    Type: Book chapter , NonPeerReviewed
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  • 200
    Publication Date: 2022-08-17
    Description: Diversity within marine microbiomes spans the three domains of life: microbial eukaryotes (i.e., protists), bacteria, and archaea. Although protists were the first microbes observed by microscopy, it took the advent of molecular techniques to begin to resolve their complex and reticulate evolutionary history. Symbioses between microbial entities have been key in this journey, and such interactions continue to shape the ecology of marine microbiomes. Nowadays, photosynthetic marine protists are appreciated for their activities as primary producers, rivalling land plant contributions in the global carbon cycle. Predatory protists are known for consuming prokaryotes and other protists, with some combining metabolisms into a mixotrophic lifestyle. Still, much must be learned about specific interactions and lifestyles, especially for uncultured groups recognized just by environmental sequences. With respect to the fate of protists in food webs, there are many paths to consider. Despite being in early stages of identifying interactions, whether mutualistic or death-inducing infections by parasites and viruses, knowledge is advancing rapidly via methods for interrogation in nature without culturing. Here, we review marine protists, their evolutionary histories, diversity, ecological roles, and lifestyles in all layers of the ocean, with reference to how views have shifted over time through extensive investigation.
    Type: Book chapter , PeerReviewed
    Format: text
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