ALBERT

Beschreibung: Author Posting. © The Author(s), 2019. This is the author's version of the work. It is posted here by permission of Elsevier Ltd. for personal use, not for redistribution. The definitive version was published in Geochimica et Cosmochimica Acta 244 (2019): 216-228, doi:10.1016/j.gca.2018.10.012.

Beschreibung: Mountain glaciers store dissolved organic carbon (DOC) that can be exported to river networks and subsequently respired to CO2. Despite this potential importance within the global carbon cycle, the seasonal variability and downstream transport of glacier-derived DOC in mountainous river basins remains largely unknown. To provide novel insight, here we present DOC concentrations and molecular-level dissolved organic matter (DOM) compositions from 22 nested, glaciated catchments (1.4 – 81.8 % glacier cover by area) in the Upper Ganges Basin, Western Himalaya over the course of the Indian summer monsoon (ISM) in 2014. Aliphatic and peptide-like compounds were abundant in glaciated headwaters but were overprinted by soil-derived phenolic, polyphenolic and condensed aromatic material as DOC concentrations increase moving downstream. Across the basin, DOC concentrations and soil-derived compound class contributions decreased sharply from pre- to post-ISM, implying increased relative contribution of glaciated headwater signals as the monsoon progresses. Incubation experiments further revealed a strong compositional control on the fraction of bioavailable DOC (BDOC), with glacier-derived DOC exhibiting the highest bioavailability. We hypothesize that short-term (i.e. in the coming decades) increases in glacier melt flux driven by climate change will further bias exported DOM toward an aliphatic-rich, bioavailable signal, especially during the ISM and post-ISM seasons. In contrast, eventual decreases in glacier melt flux due to mass loss will likely lead to more a soil-like DOM composition and lower bioavailability of exported DOC in the long term.

Beschreibung: We thank Britta Voss (WHOI) for assisting with sample collection; Travis Drake (FSU), and Ekaterina Bulygina (Woods Hole Research Center) for laboratory assistance; and the NHMFL ICR user program (NSF-DMR-1157490) for aiding in data acquisition and analysis. This study was partly supported by NSF-DEB-1145932 to R.G.M.S. J.D.H. was partially supported by the NSF Graduate Research Fellowship Program under grant number 2012126152, with additional support in the form of travel grants awarded by the MIT Houghten Fund and NHMFL. All data used in this study are available in the Supporting Information Tables S1 and S2.

Beschreibung: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Fringer, O. B., Dawson, C. N., He, R., Ralston, D. K., & Zhang, Y. J. The future of coastal and estuarine modeling: findings from a workshop. Ocean Modelling, 143, (2019): 101458, doi:10.1016/j.ocemod.2019.101458.

Beschreibung: This paper summarizes the findings of a workshop convened in the United States in 2018 to discuss methods in coastal and estuarine modeling and to propose key areas of research and development needed to improve their accuracy and reliability. The focus of this paper is on physical processes, and we provide an overview of the current state-of-the-art based on presentations and discussions at the meeting, which revolved around the four primary themes of parameterizations, numerical methods, in-situ and remote-sensing measurements, and high-performance computing. A primary outcome of the workshop was agreement on the need to reduce subjectivity and improve reproducibility in modeling of physical processes in the coastal ocean. Reduction of subjectivity can be accomplished through development of standards for benchmarks, grid generation, and validation, and reproducibility can be improved through development of standards for input/output, coupling and model nesting, and reporting. Subjectivity can also be reduced through more engagement with the applied mathematics and computer science communities to develop methods for robust parameter estimation and uncertainty quantification. Such engagement could be encouraged through more collaboration between the forward and inverse modeling communities and integration of more applied math and computer science into oceanography curricula. Another outcome of the workshop was agreement on the need to develop high-resolution models that scale on advanced HPC systems to resolve, rather than parameterize, processes with horizontal scales that range between the depth and the internal Rossby deformation scale. Unsurprisingly, more research is needed on parameterizations of processes at scales smaller than the depth, including parameterizations for drag (including bottom roughness, bedforms, vegetation and corals), wave breaking, and air–sea interactions under strong wind conditions. Other topics that require significantly more work to better parameterize include nearshore wave modeling, sediment transport modeling, and morphodynamics. Finally, it was agreed that coastal models should be considered as key infrastructure needed to support research, just like laboratory facilities, field instrumentation, and research vessels. This will require a shift in the way proposals related to coastal ocean modeling are reviewed and funded.

Beschreibung: We thank Carmen Torres at Stanford University and Jennifer Warrillow at North Carolina State University for their assistance with workshop logistics. Helpful comments and suggestions were provided by two anonymous reviewers and Hans Burchard and John Warner. The workshop and preparation of this paper were funded by U.S. National Science Foundation Grant OCE-1749613.

Beschreibung: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Remote Sensing of Environment 209 (2018): 677-699, doi:10.1016/j.rse.2018.02.075.

Beschreibung: We analyse ten years of QuikSCAT satellite surface winds to statistically characterize the spatio-temporal variability of the westward mountain-gap wind jets over the northern Red Sea. These wind jets bring relatively cold and dry air from the Arabian Desert, increasing heat loss and evaporation over the region similar to cold-air outbreaks from mid and subpolar latitudes. QuikSCAT captures the spatial structure of the wind jets and agrees well with in situ observations from a heavily instrumented mooring in the northern Red Sea. The local linear correlations between QuikSCAT and in situ winds are 0.96 (speed) and 0.85 (direction). QuikSCAT also reveals that cross-axis winds such as the mountain-gap wind jets are a major component of the regional wind variability. The cross-axis wind pattern appears as the second (or third) mode in the four vector Empirical Orthogonal Function analyses we performed, explaining between 6% to 11% of the wind variance. Westward wind jets are typical in winter, especially in December and January, but with strong interannual variability. Several jets can occur simultaneously and cover a large latitudinal range of the northern Red Sea, which we call large-scale westward events. QuikSCAT recorded 18 large-scale events over ten years, with duration between 3 to 8 days and strengths varying from 3–4 to 9–10 m/s. These events cause large changes in the wind stress curl pattern, imposing a remarkable sequence of positive and negative curl along the Red Sea main axis, which might be a wind forcing mechanism for the oceanic mesoscale circulation.

Beschreibung: This work was supported by NSF grant OCE-1435665 and NASA grant NNX14AM71G.

Beschreibung: This paper is not subject to U.S. copyright. The definitive version was published in Coastal Engineering 136 (2018): 147-160, doi:10.1016/j.coastaleng.2018.01.003.

Beschreibung: The performance of a linear depth inversion algorithm, cBathy, applied to coastal video imagery was assessed using observations of water depth from vessel-based hydrographic surveys and in-situ altimeters for a wide range of wave conditions (0.3 〈 significant wave height 〈 4.3 m) on a sandy Atlantic Ocean beach near Duck, North Carolina. Comparisons of video-based cBathy bathymetry with surveyed bathymetry were similar to previous studies (root mean square error (RMSE) = 0.75 m, bias = −0.26 m). However, the cross-shore locations of the surfzone sandbar in video-derived bathymetry were biased onshore 18–40 m relative to the survey when offshore wave heights exceeded 1.2 m or were greater than half of the bar crest depth, and broke over the sandbar. The onshore bias was 3–4 m when wave heights were less than 0.8 m and were not breaking over the sandbar. Comparisons of video-derived seafloor elevations with in-situ altimeter data at three locations onshore of, near, and offshore of the surfzone sandbar over ∼1 year provide the first assessment of the cBathy technique over a wide range of wave conditions. In the outer surf zone, video-derived results were consistent with long-term patterns of bathymetric change (r2 = 0.64, RMSE = 0.26 m, bias = −0.01 m), particularly when wave heights were less than 1.2 m (r2 = 0.83). However, during storms when wave heights exceeded 3 m, video-based cBathy over-estimated the depth by up to 2 m. Near the sandbar, the sign of depth errors depended on the location relative to wave breaking, with video-based depths overestimated (underestimated) offshore (onshore) of wave breaking in the surfzone. Wave speeds estimated by video-based cBathy at the initiation of wave breaking often were twice the speeds predicted by linear theory, and up to three times faster than linear theory during storms. Estimated wave speeds were half as fast as linear theory predictions at the termination of wave breaking shoreward of the sandbar. These results suggest that video-based cBathy should not be used to track the migration of the surfzone sandbar using data when waves are breaking over the bar nor to quantify morphological evolution during storms. However, these results show that during low energy conditions, cBathy estimates could be used to quantify seasonal patterns of seafloor evolution.

Beschreibung: This research was funded by the U.S. Army Corps of Engineers Coastal Field Data Collection Program, the Deputy Assistant Secretary of the Army for Research and Technology under ERDC's research program titled “Force Projection Entry Operations, STO D.GRD.2015.34”, the U.S. Naval Research Laboratory base program from the Office of Naval Research, a Vannevar Bush Faculty Fellowship funded by the Assistant Secretary of Defense for Research and Engineering, and the National Science Foundation.

Beschreibung: Author Posting. © American Meteorological Society, 2018. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 48 (2018): 511-529, doi:10.1175/JPO-D-17-0140.1.

Beschreibung: The large-scale circulation of the bottom layer of the Gulf of Mexico is analyzed, with special attention to the historically least studied western basin. The analysis is based on 4 years of data collected by 158 subsurface floats parked at 1500 and 2500 m and is complemented with data collected by current meter moorings in the western basin during the same period. Three main circulation patterns stand out: a cyclonic boundary current, a cyclonic gyre in the abyssal plain, and the very high eddy kinetic energy observed in the eastern Gulf. The boundary current and the cyclonic gyre appear as distinct features, which interact in the western tip of the Yucatan shelf. The persistence and continuity of the boundary current is addressed. Although high variability is observed, the boundary flow serves as a pathway for water to travel around the western basin in approximately 2 years. An interesting discovery is the separation of the boundary current over the northwestern slope of the Yucatan shelf. The separation and retroflection of the along-slope current appears to be a persistent feature and is associated with anticyclonic eddies whose genesis mechanism remains to be understood. As the boundary flow separates, it feeds into the westward flow of the deep cyclonic gyre. The location of this gyre—named the Sigsbee Abyssal Gyre—coincides with closed geostrophic contours, so eddy–topography interaction via bottom form stresses may drive this mean flow. The contribution to the cyclonic vorticity of the gyre by modons traveling under Loop Current eddies is discussed.

Beschreibung: This work was supported by the Bureau of Ocean Energy Management (BOEM) under Contract M10PC00112 assigned to Leidos, Inc.

Beschreibung: Author Posting. © American Meteorological Society, 2018. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Climate 31 (2018): 4157-4174, doi:10.1175/JCLI-D-17-0654.1.

Beschreibung: Decadal variabilities in Indian Ocean subsurface ocean heat content (OHC; 50–300 m) since the 1950s are examined using ocean reanalyses. This study elaborates on how Pacific variability modulates the Indian Ocean on decadal time scales through both oceanic and atmospheric pathways. High correlations between OHC and thermocline depth variations across the entire Indian Ocean Basin suggest that OHC variability is primarily driven by thermocline fluctuations. The spatial pattern of the leading mode of decadal Indian Ocean OHC variability closely matches the regression pattern of OHC on the interdecadal Pacific oscillation (IPO), emphasizing the role of the Pacific Ocean in determining Indian Ocean OHC decadal variability. Further analyses identify different mechanisms by which the Pacific influences the eastern and western Indian Ocean. IPO-related anomalies from the Pacific propagate mainly through oceanic pathways in the Maritime Continent to impact the eastern Indian Ocean. By contrast, in the western Indian Ocean, the IPO induces wind-driven Ekman pumping in the central Indian Ocean via the atmospheric bridge, which in turn modifies conditions in the southwestern Indian Ocean via westward-propagating Rossby waves. To confirm this, a linear Rossby wave model is forced with wind stresses and eastern boundary conditions based on reanalyses. This linear model skillfully reproduces observed sea surface height anomalies and highlights both the oceanic connection in the eastern Indian Ocean and the role of wind-driven Ekman pumping in the west. These findings are also reproduced by OGCM hindcast experiments forced by interannual atmospheric boundary conditions applied only over the Pacific and Indian Oceans, respectively.

Beschreibung: This research was supported by a scholarship from the China Scholarship Council (CSC) to X. J., a research fellowship by the Alexander von Humboldt Foundation to C. C. U., an NSF OCE PO Grant (OCE- 1242989) to Y.-O. K., the ONR Young Investigator Award (N00014-15-1-2588) to H. S., and a research grant from the Ministry of Science and Technology of the People’s Republic of China to Tsinghua University (2017YFA0603902).

Beschreibung: 2018-10-30

Beschreibung: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Geochimica et Cosmochimica Acta 228 (2018): 95-118, doi:10.1016/j.gca.2018.01.021.

Beschreibung: Hosted in basaltic substrate on the ultra-slow spreading Mid-Cayman Rise, the Piccard hydrothermal field is the deepest currently known seafloor hot-spring (4957–4987 m). Due to its great depth, the Piccard site is an excellent natural system for investigating the influence of extreme pressure on the formation of submarine vent fluids. To investigate the role of rock composition and deep circulation conditions on fluid chemistry, the abundance and isotopic composition of organic, inorganic, and dissolved volatile species in high temperature vent fluids at Piccard were examined in samples collected in 2012 and 2013. Fluids from the Beebe Vents and Beebe Woods black smokers vent at a maximum temperature of 398 °C at the seafloor, however several lines of evidence derived from inorganic chemistry (Cl, SiO2, Ca, Br, Fe, Cu, Mn) support fluid formation at much higher temperatures in the subsurface. These high temperatures, potentially in excess of 500 °C, are attainable due to the great depth of the system. Our data indicate that a single deep-rooted source fluid feeds high temperature vents across the entire Piccard field. High temperature Piccard fluid H2 abundances (19.9 mM) are even higher than those observed in many ultramafic-influenced systems, such as the Rainbow (16 mM) and the Von Damm hydrothermal fields (18.2 mM). In the case of Piccard, however, these extremely high H2 abundances can be generated from fluid-basalt reaction occurring at very high temperatures. Magmatic and thermogenic sources of carbon in the high temperature black smoker vents are described. Dissolved ΣCO2 is likely of magmatic origin, CH4 may originate from a combination of thermogenic sources and leaching of abiotic CH4 from mineral-hosted fluid inclusions, and CO abundances are at equilibrium with the water–gas shift reaction. Longer-chained n-alkanes (C2H6, C3H8, n-C4H10, i-C4H10) may derive from thermal alteration of dissolved and particulate organic carbon sourced from the original seawater source, entrainment of microbial ecosystems peripheral to high temperature venting, and/or abiotic mantle sources. Dissolved ΣHCOOH in the Beebe Woods fluid is consistent with thermodynamic equilibrium for abiotic production via ΣCO2 reduction with H2 at 354 °C measured temperature. A lack of ΣHCOOH in the relatively higher temperature 398 °C Beebe Vent fluids demonstrates the temperature sensitivity of this equilibrium. Abundant basaltic seafloor outcrops and the axial location of the vent field, along with multiple lines of geochemical evidence, support extremely high temperature fluid-rock reaction with mafic substrate as the dominant control on Piccard fluid chemistry. These results expand the known diversity of vent fluid composition, with implications for supporting microbiological life in both the modern and ancient ocean.

Beschreibung: This work was supported by the National Aeronautics and Space Administration (NASA) Astrobiology Science and Technology for Exploring Planets program [award number NNX09AB75G to CRG and JSS]; and the National Science Foundation [award number OCE-1061863 to CRG and JSS].

Beschreibung: Author Posting. © American Meteorological Society, 2018. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Climate 31 (2018): 2771-2796, doi:10.1175/JCLI-D-17-0061.1.

Beschreibung: The Generalized Equilibrium Feedback Analysis (GEFA) is used to distinguish the influence of the Oyashio Extension (OE) and the Kuroshio Extension (KE) variability on the atmosphere from 1979 to 2014 from that of the main SST variability modes, using seasonal mean anomalies. Remote SST anomalies are associated with each single oceanic regressor, but the multivariate approach efficiently confines their SST footprints. In autumn [October–December (OND)], the OE meridional shifts are followed by a North Pacific Oscillation (NPO)-like signal. The OE influence is not investigated in winter [December–February (DJF)] because of multicollinearity, but a robust response with a strong signal over the Bering Sea is found in late winter/early spring [February–April (FMA)], a northeastward strengthening of the Aleutian low following a northward OE shift. A robust response to the KE variability is found in autumn, but not in winter and late winter when the KE SST footprint becomes increasingly small and noisy as regressors are added in GEFA. In autumn, a positive PDO is followed by a northward strengthening of the Aleutian low and a southward shift of the storm track in the central Pacific, reflecting the surface heat flux footprint in the central Pacific. In winter, the PDO shifts the maximum baroclinicity and storm track southward, the response strongly tilts westward with height in the North Pacific, and there is a negative NAO-like teleconnection. In late winter, the North Pacific NPO-like response to the PDO interferes negatively with the response to the OE and is only detected when the OE is represented in GEFA. A different PDO influence on the atmospheric circulation is found from 1958 to 1977.

Beschreibung: This research has received funding from the European Union 7th Framework Program (FP7 2007-2013) under Grant Agreement 308299 (NACLIM) and from NSF Grants AGS CLD 1035423 and OCE PO 1242989.

Beschreibung: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Earth and Planetary Science Letters 487 (2018): 165-178, doi:10.1016/j.epsl.2018.01.032.

Beschreibung: A new geospeedometer is developed based on the differential closures of Mg and rare earth element (REE) bulk-diffusion between coexisting plagioclase and clinopyroxene. By coupling the two elements with distinct bulk closure temperatures, this speedometer can numerically solve the initial temperatures and cooling rates for individual rock samples. As the existing Mg-exchange thermometer was calibrated for a narrow temperature range and strongly relies on model-dependent silica activities, a new thermometer is developed using literature experimental data. When the bulk closure temperatures of Mg and REE are determined, respectively, using this new Mg-exchange thermometer and the existing REE-exchange thermometer, this speedometer can be implemented for a wide range of compositions, mineral modes, and grain sizes. Applications of this new geospeedometer to oceanic gabbros from the fast-spreading East Pacific Rise at Hess Deep reveal that the lower oceanic crust crystallized at temperatures of 998–1353 °C with cooling rates of 0.003–10.2 °C/yr. Stratigraphic variations of the cooling rates and crystallization temperatures support deep hydrothermal circulations and in situ solidification of various replenished magma bodies. Together with existing petrological, geochemical and geophysical evidence, results from this new speedometry suggest that the lower crust formation at fast-spreading mid-ocean ridges involves emplacement of primary mantle melts in the deep section of the crystal mush zone coupled with efficient heat removal by crustal-scale hydrothermal circulations. The replenished melts become chemically and thermally evolved, accumulate as small magma bodies at various depths, feed the shallow axial magma chamber, and may also escape from the mush zone to generate off-axial magma lenses.

Beschreibung: C. Sun acknowledges support from the Devonshire postdoctoral scholarship at WHOI and NSF grant OCE-1637130. This work was also supported by Natural Environment Research Council (NERC) Grant NE/I001670/1 to J. Lissenberg.

Beschreibung: Author Posting. © American Meteorological Society, 2018. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 48 (2018): 1367-1373, doi:10.1175/JPO-D-17-0185.1.

Beschreibung: An earlier study indicates that the side melting of icebergs subject to vertically homogeneous horizontal velocities is controlled by two distinct regimes, which depend on the melt plume behavior and produce a nonlinear dependence of side melt rate on velocity. Here, we extend this study to consider ice blocks melting in a two-layer vertically sheared flow in a laboratory setting. It is found that the use of the vertically averaged flow speed in current melt parameterizations gives an underestimate of the submarine side melt rate, in part because of the nonlinearity of the dependence of the side melt rate on flow speed but also because vertical shear in the horizontal velocity profile fundamentally changes the flow splitting around the ice block and consequently the velocity felt by the ice surface. An observational record of 90 icebergs in a Greenland fjord suggests that this effect could produce an average underestimate of iceberg side melt rates of 21%.

Beschreibung: A. F. was supported by NA14OAR4320106 from the National Oceanic and Atmospheric Administration, U.S. Department of Commerce. C. C. was supported by NSF OCE-1658079 and F. S. was supported by NSF OCE-1657601 and NSF PLR-1743693.

Beschreibung: 2018-12-12

Beschreibung: Author Posting. © The Author(s), 2018. This article is posted here by permission of Oxford University Press for personal use, not for redistribution. The definitive version was published in Geophysical Journal International 214 (2018): 2224–2235, doi:10.1093/gji/ggy201.

Beschreibung: The key kinematic earthquake source parameters: rupture velocity, duration and area, shed light on earthquake dynamics, provide direct constraints on stress drop, and have implications for seismic hazard. However, for moderate and small earthquakes, these parameters are usually poorly constrained due to limitations of the standard analysis methods. Numerical experiments by Kaneko and Shearer demonstrated that standard spectral fitting techniques can lead to roughly one order of magnitude variation in stress-drop estimates that do not reflect the actual rupture properties even for simple crack models. We utilize these models to explore an alternative approach where we estimate the rupture area directly. For the suite of models, the area averaged static stress drop is nearly constant for models with the same underlying friction law, yet corner-frequency-based stress-drop estimates vary by a factor of 5–10 even for noise-free data. Alternatively, we simulated inversions for the rupture area as parametrized by the second moments of the slip distribution. A natural estimate for the rupture area derived from the second moments is A = πLcWc, where Lc and Wc are the characteristic rupture length and width. This definition yields estimates of stress drop that vary by only 10 per cent between the models but are slightly larger than the true area averaged values. We simulate inversions for the second moments for the various models and find that the area can be estimated well when there are at least 15 available measurements of apparent duration at a variety of take-off angles. The improvement compared to azimuthally averaged corner-frequency-based approaches results from the second moments accounting for directivity and removing the assumption of a circular rupture area, both of which bias the standard approach. We also develop a new method that determines the minimum and maximum values of rupture area that are consistent with a particular data set at the 95 per cent confidence level. For the Kaneko and Shearer models with 20+ randomly distributed observations and ∼10 per cent noise levels, we find that the maximum and minimum bounds on rupture area typically vary by a factor of two and that the minimum stress drop is often more tightly constrained than the maximum.

Beschreibung: This work was supported by USGS NEHRP Award G17AP00029. The research was supported by the Southern California Earthquake Center (SCEC; Contribution No. 8013). SCEC is funded by NSF Cooperative Agreement EAR-1033462 and USGS Cooperative Agreement G12AC20038. YK was supported by both public funding from the Government of New Zealand and the Royal Society of New Zealand’s Rutherford Discovery Fellowship.

Beschreibung: Author Posting. © American Meteorological Society, 2018. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Climate 31 (2018): 8059-8079, doi:10.1175/JCLI-D-17-0769.1.

Beschreibung: We use the method of least squares with Lagrange multipliers to fit an ocean general circulation model to the Multiproxy Approach for the Reconstruction of the Glacial Ocean Surface (MARGO) estimate of near sea surface temperature (NSST) at the Last Glacial Maximum (LGM; circa 23–19 thousand years ago). Compared to a modern simulation, the resulting global, last-glacial ocean state estimate, which fits the MARGO data within uncertainties in a free-running coupled ocean–sea ice simulation, has global-mean NSSTs that are 2°C lower and greater sea ice extent in all seasons in both the Northern and Southern Hemispheres. Increased brine rejection by sea ice formation in the Southern Ocean contributes to a stronger abyssal stratification set principally by salinity, qualitatively consistent with pore fluid measurements. The upper cell of the glacial Atlantic overturning circulation is deeper and stronger. Dye release experiments show similar distributions of Southern Ocean source waters in the glacial and modern western Atlantic, suggesting that LGM NSST data do not require a major reorganization of abyssal water masses. Outstanding challenges in reconstructing LGM ocean conditions include reducing effects from model biases and finding computationally efficient ways to incorporate abyssal tracers in global circulation inversions. Progress will be aided by the development of coupled ocean–atmosphere–ice inverse models, by improving high-latitude model processes that connect the upper and abyssal oceans, and by the collection of additional paleoclimate observations.

Beschreibung: DEA was supported by a NSF Graduate Research Fellowship and NSF Grant OCE-1060735. OM acknowledges support from the NSF. GF was supported by NASA Award 1553749 and Simons Foundation Award 549931.

Beschreibung: Author Posting. © American Meteorological Society, 2018. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 48 (2018): 1969-1993, doi:10.1175/JPO-D-18-0031.1.

Beschreibung: Upstream mean semidiurnal internal tidal energy flux has been found in the Gulf Stream in hydrodynamical model simulations of the Atlantic Ocean. A major source of the energy in the simulations is the south edge of Georges Bank, where strong and resonant Gulf of Maine tidal currents are found. An explanation of the flux pattern within the Gulf Stream is that internal wave modal rays can be strongly redirected by baroclinic currents and even trapped (ducted) by current jets that feature strong velocities above the thermocline that are directed counter to the modal wavenumber vector (i.e., when the waves travel upstream). This ducting behavior is analyzed and explained here with ray-based wave propagation studies for internal wave modes with anisotropic wavenumbers, as occur in mesoscale background flow fields. Two primary analysis tools are introduced and then used to analyze the strong refraction and ducting: the generalized Jones equation governing modal properties and ray equations that are suitable for studying waves with anisotropic wavenumbers.

Beschreibung: The Woods Hole research was supported by National Science Foundation Grant OCE-1060430 and by the Office of Naval Research Grants N00014-11-1-0701 and N00014-17-1-2624. The USM research was supported by ONR Grant N00014-15-1-2288 and National Science Foundation Grant OCE-1537449.

Beschreibung: 2019-02-28

Beschreibung: This paper is not subject to U.S. copyright. The definitive version was published in Marine and Petroleum Geology 19 (2002): 971-987, doi:10.1016/S0264-8172(02)00132-0.

Beschreibung: Considerable crustal thickness variations are inferred along Cayman Trough, a slow-spreading ocean basin in the Caribbean Sea, from modeling of the gravity field. The crust to a distance of 50 km from the spreading center is only 2–3 km thick in agreement with dredge and dive results. Crustal thickness increases to ∼5.5 km at distances between 100 and 430 km west of the spreading center and to 3.5–6 km at distances between 60 and 370 km east of the spreading center. The increase in thickness is interpreted to represent serpentinization of the uppermost mantle lithosphere, rather than a true increase in the volume of accreted ocean crust. Serpentinized peridotite rocks have indeed been dredged from the base of escarpments of oceanic crust rocks in Cayman Trough. Laboratory-measured density and P-wave speed of peridotite with 40–50% serpentine are similar to the observed speed in published refraction results and to the inferred density from the model. Crustal thickness gradually increases to 7–8 km at the far ends of the trough partially in areas where sea floor magnetic anomalies were identified. Basement depth becomes gradually shallower starting 250 km west of the rise and 340 km east of the rise, in contrast to the predicted trend of increasing depth to basement from cooling models of the oceanic lithosphere. The gradual increase in apparent crustal thickness and the shallowing trend of basement depth are interpreted to indicate that the deep distal parts of Cayman Trough are underlain by highly attenuated crust, not by a continuously accreted oceanic crust.

Beschreibung: DFC was partly supported by NSF grant EAR-92-19796.

Beschreibung: Author Posting. © The Authors, 2018. This article is posted here by permission of The Royal Astronomical Society for personal use, not for redistribution. The definitive version was published in Geophysical Journal International 215 (2018): 713–735, doi:10.1093/gji/ggy313.

Beschreibung: Gas flux in volcanic conduits is often associated with long-period oscillations known as seismic tremor (Lesage et al.; Nadeau et al.). In this study, we revisit and extend the ‘magma wagging’and ‘whirling’models for seismic tremor, in order to explore the effects of gas flux on the motion of a magma column surrounded by a permeable vesicular annulus (Jellinek & Bercovici; Bercovici et al.; Liao et al.). We find that gas flux flowing through the annulus leads to a Bernoulli effect, which causes waves on the magma column to become unstable and grow. Specifically, the Bernoulli effects are associated with torques and forces acting on the magma column, increasing its angular momentum and energy. As the displacement of the magma column becomes large due to the Bernoulli effect, frictional drag on the conduit wall decelerates the motions of the column, restoring them to small amplitude. Together, the Bernoulli effect and the damping effect contribute to a self-sustained wagging-and-whirling mechanism that help explain the longevity of long-period seismic tremor.

Beschreibung: This work was supported by National Science Foundation grants EAR-1344538 and EAR-1645057

Beschreibung: Author Posting. © American Meteorological Society, 2018. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 48 (2018): 1375-1384, doi:10.1175/JPO-D-17-0266.1.

Beschreibung: The relationship between net mixing and the estuarine exchange flow may be quantified using a salinity variance budget. Here “mixing” is defined as the rate of destruction of volume-integrated salinity variance, and the exchange flow is quantified using the total exchange flow. These concepts are explored using an idealized 3D model estuary. It is shown that in steady state (e.g., averaging over the spring–neap cycle) the volume-integrated mixing is approximately given by Mixing ≅ SinSoutQr, where Sin and Sout are the representative salinities of in- and outflowing layers at the mouth and Qr is the river volume flux. This relationship provides an extension of the familiar Knudsen relation, in which the exchange flow is diagnosed based on knowledge of these same three quantities, quantitatively linking mixing to the exchange flow.

Beschreibung: The work was supported by the National Science Foundation through Grants OCE-1736242 to PM and OCE-1736539 to WRG and by the German Research Foundation through Grants TRR 181 and GRK 2000 to HB.

Beschreibung: Author Posting. © American Meteorological Society, 2018. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 48 (2018): 2703-2719, doi:10.1175/JPO-D-17-0245.1.

Beschreibung: A new set of deep float trajectory data collected in the Gulf of Mexico from 2011 to 2015 at 1500- and 2500-m depths is analyzed to describe mesoscale processes, with particular attention paid to the western Gulf. Wavelet analysis is used to identify coherent eddies in the float trajectories, leading to a census of the basinwide coherent eddy population and statistics of the eddies’ kinematic properties. The eddy census reveals a new formation region for anticyclones off the Campeche Escarpment, located northwest of the Yucatan Peninsula. These eddies appear to form locally, with no apparent direct connection to the upper layer. Once formed, the eddies drift westward along the northern edge of the Sigsbee Abyssal Gyre, located in the southwestern Gulf of Mexico over the abyssal plain. The formation mechanism and upstream sources for the Campeche Escarpment eddies are explored: the observational data suggest that eddy formation may be linked to the collision of a Loop Current eddy with the western boundary of the Gulf. Specifically, the disintegration of a deep dipole traveling under the Loop Current eddy Kraken, caused by the interaction with the northwestern continental slope, may lead to the acceleration of the abyssal gyre and the boundary current in the Bay of Campeche region.

Beschreibung: The authors were supported by the Department of the Interior, Bureau of Ocean Energy Management (BOEM), Contract M10PC00112 to Leidos, Inc., Raleigh, North Carolina.

Beschreibung: 2019-05-07

Beschreibung: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Marine Chemistry 206 (2018): 7-18, doi:10.1016/j.marchem.2018.08.005.

Beschreibung: The lateral export of carbon from coastal marshes via tidal exchange is a key component of the marsh carbon budget and coastal carbon cycles. However, the magnitude of this export has been difficult to accurately quantify due to complex tidal dynamics and seasonal cycling of carbon. In this study, we use in situ, high-frequency measurements of dissolved inorganic carbon (DIC) and water fluxes to estimate lateral DIC fluxes from a U.S. northeastern salt marsh. DIC was measured by a CHANnelized Optical Sensor (CHANOS) that provided an in situ concentration measurement at 15-min intervals, during periods in summer (July – August) and late fall (December). Seasonal changes in the marsh had strong effects on DIC concentrations, while tidally-driven water fluxes were the fundamental vehicle of marsh carbon export. Episodic events, such as groundwater discharge and mean sea water level changes, can impact DIC flux through altered DIC concentrations and water flow. Variability between individual tides within each season was comparable to mean variability between the two seasons. Estimated mean DIC fluxes based on a multiple linear regression (MLR) model of DIC concentrations and high-frequency water fluxes agreed reasonably well with those derived from CHANOS DIC measurements for both study periods, indicating that high-frequency, modeled DIC concentrations, coupled with continuous water flux measurements and a hydrodynamic model, provide a robust estimate of DIC flux. Additionally, an analysis of sampling strategies revealed that DIC fluxes calculated using conventional sampling frequencies (hourly to two-hourly) of a single tidal cycle are unlikely to capture a representative mean DIC flux compared to longer-term measurements across multiple tidal cycles with sampling frequency on the order of tens of minutes. This results from a disproportionately large amount of the net DIC flux occurring over a small number of tidal cycles, while most tides have a near-zero DIC export. Thus, high-frequency measurements (on the order of tens of minutes or better) over the time period of interest are necessary to accurately quantify tidal exports of carbon species from salt marshes.

Beschreibung: This work was funded by NSF Graduate Research Fellowship Program, NSF Ocean Sciences Postdoctoral Fellowship (OCE-1323728), Link FoundationOcean Engineering and Instrumentation Fellowship, National Institute of Science and Technology (NIST no. 60NANB10D024), the USGS LandCarbon and Coastal & Marine Geology Programs, NSF Chemical Oceanography Program (OCE-1459521), NSF Ocean Technology and Interdisciplinary Coordination program (OCE-1233654) and NOAA Science Collaborative (NA09NOS4190153).

Beschreibung: Author Posting. © American Meteorological Society, 2018. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Climate 31 (2018): 9881-9901, doi:10.1175/JCLI-D-17-0889.1.

Beschreibung: The Atlantic meridional overturning circulation and associated poleward heat transport are balanced by northern heat loss to the atmosphere and corresponding water-mass transformation. The circulation of northward-flowing Atlantic Water at the surface and returning overflow water at depth is particularly manifested—and observed—at the Greenland–Scotland Ridge where the water masses are guided through narrow straits. There is, however, a rich variability in the exchange of water masses across the ridge on all time scales. Focusing on seasonal and interannual time scales, and particularly the gateways of the Denmark Strait and between the Faroe Islands and Shetland, we specifically assess to what extent the exchanges of water masses across the Greenland–Scotland Ridge relate to wind forcing. On seasonal time scales, the variance explained of the observed exchanges can largely be related to large-scale wind patterns, and a conceptual model shows how this wind forcing can manifest via a barotropic, cyclonic circulation. On interannual time scales, the wind stress impact is less direct as baroclinic mechanisms gain importance and observations indicate a shift in the overflows from being more barotropically to more baroclinically forced during the observation period. Overall, the observed Greenland–Scotland Ridge exchanges reflect a horizontal (cyclonic) circulation on seasonal time scales, while the interannual variability more represents an overturning circulation.

Beschreibung: This research was supported by the Research Council of Norway project NORTH (Grant 229763). Additional support for M. A. Spall was provided by National Science Foundation Grant OCE- 1558742, for T. Eldevik and S. Østerhus by the European Union’s Horizon 2020 research and innovation program project Blue-Action (Grant 727852), and for S. Østerhus by the European Framework Programs under Grant Agreement 308299 (NACLIM).

Beschreibung: Author Posting. © The Authors, 2018. This article is posted here by permission of The Royal Astronomical Society for personal use, not for redistribution. The definitive version was published in Geophysical Journal International 215 (2018): 460–473, doi:10.1093/gji/ggy152.

Beschreibung: In this work, we present a new methodology to predict grain-size distributions from geophysical data. Specifically, electric conductivity and magnetic susceptibility of seafloor sediments recovered from electromagnetic profiling data are used to predict grain-size distributions along shelf-wide survey lines. Field data from the NW Iberian shelf are investigated and reveal a strong relation between the electromagnetic properties and grain-size distribution. The here presented workflow combines unsupervised and supervised machine-learning techniques. Non-negative matrix factorization is used to determine grain-size end-members from sediment surface samples. Four end-members were found, which well represent the variety of sediments in the study area. A radial basis function network modified for prediction of compositional data is then used to estimate the abundances of these end-members from the electromagnetic properties. The end-members together with their predicted abundances are finally back transformed to grain-size distributions. A minimum spatial variation constraint is implemented in the training of the network to avoid overfitting and to respect the spatial distribution of sediment patterns. The predicted models are tested via leave-one-out cross-validation revealing high prediction accuracy with coefficients of determination (R2) between 0.76 and 0.89. The predicted grain-size distributions represent the well-known sediment facies and patterns on the NW Iberian shelf and provide new insights into their distribution, transition and dynamics. This study suggests that electromagnetic benthic profiling in combination with machine learning techniques is a powerful tool to estimate grain-size distribution of marine sediments.

Beschreibung: This work was funded through DFG Research Center/Cluster of Excellence ‘The Ocean in the Earth System’ and was part of MARUM Research Area SD

Beschreibung: This paper is not subject to U.S. copyright. The definitive version was published in Marine Geology 337 (2013): 53-66, doi:10.1016/j.margeo.2013.01.005.

Beschreibung: Submarine canyons are common features of continental margins worldwide. They are conduits that funnel vast quantities of sediment from the continents to the deep sea. Though it is known that submarine canyons form primarily from erosion induced by submarine sediment flows, we currently lack quantitative, empirically based expressions that describe the morphology of submarine canyon networks. Multibeam bathymetry data along the entire passive US Atlantic margin (USAM) and along the active central California margin near Monterey Bay provide an opportunity to examine the fine-scale morphology of 171 slope-sourced canyons. Log–log regression analyses of canyon thalweg gradient (S) versus up-canyon catchment area (A) are used to examine linkages between morphological domains and the generation and evolution of submarine sediment flows. For example, canyon reaches of the upper continental slope are characterized by steep, linear and/or convex longitudinal profiles, whereas reaches farther down canyon have distinctly concave longitudinal profiles. The transition between these geomorphic domains is inferred to represent the downslope transformation of debris flows into erosive, canyon-flushing turbidity flows. Over geologic timescales this process appears to leave behind a predictable geomorphic fingerprint that is dependent on the catchment area of the canyon head. Catchment area, in turn, may be a proxy for the volume of sediment released during geomorphically significant failures along the upper continental slope. Focused studies of slope-sourced submarine canyons may provide new insights into the relationships between fine-scale canyon morphology and down-canyon changes in sediment flow dynamics.

Beschreibung: Author Posting. © American Meteorological Society, 2019. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Monthly Weather Review 147(1), (2019): 389-406. doi: 10.1175/MWR-D-18-0158.1.

Beschreibung: The quasi-biennial oscillation (QBO) is stratified by stratospheric zonal wind direction and height into four phase pairs [easterly midstratospheric winds (QBOEM), easterly lower-stratospheric winds, westerly midstratospheric winds (QBOWM), and westerly lower-stratospheric winds] using an empirical orthogonal function analysis of daily stratospheric (100–10 hPa) zonal wind data during 1980–2017. Madden–Julian oscillation (MJO) events in which the MJO convective envelope moved eastward across the Maritime Continent (MC) during 1980–2017 are identified using the Real-time Multivariate MJO (RMM) index and the outgoing longwave radiation (OLR) MJO index (OMI). Comparison of RMM amplitudes by the QBO phase pair over the MC (RMM phases 4 and 5) reveals that boreal winter MJO events have the strongest amplitudes during QBOEM and the weakest amplitudes during QBOWM, which is consistent with QBO-driven differences in upper-tropospheric lower-stratospheric (UTLS) static stability. Additionally, boreal winter RMM events over the MC strengthen during QBOEM and weaken during QBOWM. In the OMI, those amplitude changes generally shift eastward to the eastern MC and western Pacific Ocean, which may result from differences in RMM and OMI index methodologies. During boreal summer, as the northeastward-propagating boreal summer intraseasonal oscillation (BSISO) becomes the dominant mode of intraseasonal variability, these relationships are reversed. Zonal differences in UTLS stability anomalies are consistent with amplitude changes of eastward-propagating MJO events across the MC during boreal winter, and meridional stability differences are consistent with amplitude changes of northeastward-propagating BSISO events during boreal summer. Results remain consistent when stratifying by neutral ENSO phase.

Beschreibung: The authors are grateful for the funding provided by the Office of Naval Research Propagation of Intra-Seasonal Tropical Oscillations (ONR PISTON) Award N0001416WX01752 and the USNA Trident Scholar program. The authors also appreciate the helpful comments of the two external reviewers.

Beschreibung: 2019-07-07

Beschreibung: The ozonesonde is a small balloon-borne instrument that is attached to a standard radiosonde to measure profiles of ozone from the surface to 35 km with ∼100-m vertical resolution. Ozonesonde data constitute a mainstay of satellite calibration and are used for climatologies and analysis of trends, especially in the lower stratosphere where satellites are most uncertain. The electrochemical concentration cell (ECC) ozonesonde has been deployed at ∼100 stations worldwide since the 1960s, with changes over time in manufacture and procedures, including details of the cell chemical solution and data processing. As a consequence, there are biases among different stations and discontinuities in profile time series from individual site records. For 22 years the Jülich (Germany) Ozonesonde Intercomparison Experiment (JOSIE) has periodically tested ozonesondes in a simulation chamber designated the World Calibration Centre for Ozonesondes (WCCOS) by WMO. During October–November 2017 a JOSIE campaign evaluated the sondes and procedures used in Southern Hemisphere Additional Ozonesondes (SHADOZ), a 14-station sonde network operating in the tropics and subtropics. A distinctive feature of the 2017 JOSIE was that the tests were conducted by operators from eight SHADOZ stations. Experimental protocols for the SHADOZ sonde configurations, which represent most of those in use today, are described, along with preliminary results. SHADOZ stations that follow WMO-recommended protocols record total ozone within 3% of the JOSIE reference instrument. These results and prior JOSIEs demonstrate that regular testing is essential to maintain best practices in ozonesonde operations and to ensure high-quality data for the satellite and ozone assessment communities.

Beschreibung: Localisation of ductile deformation in rocks is commonly found at all scales from crustal shear zones down to grain scale shear bands. Of the various mechanisms for localisation, mechanical anisotropy has received relatively little attention, especially in numerical modelling. Mechanical anisotropy can be due to dislocation creep of minerals (e.g. ice or mica) and/or layering in rocks (e.g. bedding, cleavage). We simulated simple-shear deformation of a locally anisotropic, single-phase power-law rheology material up to shear strain of five. Localisation of shear rate in narrow shear bands occurs, depending on the magnitude of anisotropy and the stress exponent. At high anisotropy values, strain-rate frequency distributions become approximately log-normal with heavy, exponential tails. Localisation due to anisotropy is scale-independent and thus provides a single mechanism for a self-organised hierarchy of shear bands and zones from mm-to km-scales. The numerical simulations are compared with the natural example of the Northern Shear Belt at Cap de Creus, NE Spain.

Beschreibung: Stream chemistry reflects the mixture of complex biogeochemical reactions that vary across space and time within watersheds. For example, streams experience changing hydrologic connectivity to heterogeneous water sources under different flow regimes; however, it remains unclear how seasonal flow paths link these different sources and regulate concentration-discharge behavior, i.e., changes in stream solute concentration as a function of discharge. At the Susquehanna Shale Hills Critical Zone Observatory (SSHCZO) in central Pennsylvania, USA, concentrations of chemostatic solutes (K, Mg, Na, Si, Cl) vary little across a wide range of discharge values while concentrations of chemodynamic solutes (Fe, Mn, Ca) decrease sharply with increasing stream discharge. To elucidate controls on chemodynamic solute behavior, we investigated the chemistry of surface water and shallow subsurface water at the SSHCZO in early autumn when discharge was negligible and concentrations of chemodynamic solutes were high. Dissolved ions, colloids, and micron-sized particles were extracted from hillslope soils and stream sediments to evaluate how elements were mobilized into pore waters and transported from hillslopes to the stream. During the study period when flow was intermittent, the stream consisted of isolated puddles that were chemically variable along the length of the channel. Inputs of subsurface water to the stream were limited to an area of upwelling near the stream headwaters, and the water table remained over a meter below the stream bed along the rest of the channel. Chemodynamic elements Fe and Mn were preferentially mobilized from organic-rich soils as a mixture of dissolved ions, colloids, and micron-sized particles; consequently, subsurface water draining organic-rich soils in the upper catchment was enriched in Fe and Mn. Conversely, Ca increased towards the catchment outlet and was primarily mobilized from stream sediments as Ca2+. Concentrations of chemostatic solutes were relatively invariable throughout the catchment. We conclude that chemodynamic behavior at SSHCZO is driven by seasonally variable connectivity between the stream and hillslope soils. During the dry season, stream water derives from a shallow perched water table (interflow) that upwells to generate metal-rich stream headwaters. High concentrations of soluble Fe and Mn at low discharge occur when metal-rich headwaters are flushed to the catchment outlet during periodic rain events. Interflow during the dry season originates from water that infiltrates through organic-rich swales; thus, metals in the stream at low flow are ultimately derived from convergent hillslopes where biological processes have concentrated and/or mobilized these chemodynamic elements. In contrast, high concentrations of Ca2+ at low discharge are likely mobilized from stream sediments that contain secondary calcite precipitates. We infer that chemodynamic solutes are diluted at high discharge primarily due to increased flow through planar hillslopes. This study highlights how spatially heterogeneous biogeochemistry and seasonally variable flow paths regulate concentration-discharge behavior within catchments.

Beschreibung: © The Authors, 2019. This article is distributed under the terms of the Creative Commons Attribution-Noncommercial-Share Alike 4.0 International License. The definitive version was published in Molecular Phylogenetics and Evolution (2019), doi:10.1016/j.ympev.2019.02.003.

Beschreibung: The advent of massive parallel sequencing technologies has resulted in an increase of studies based upon complete mitochondrial genome DNA sequences that revisit the taxonomic status within and among species. Spatially distinct monophyly in such mitogenomic genealogies, i.e., the sharing of a recent common ancestor among con-specific samples collected in the same region has been viewed as evidence for subspecies. Several recent studies in cetaceans have employed this criterion to suggest subsequent intraspecific taxonomic revisions. We reason that employing intra-specific, spatially distinct monophyly at non-recombining, clonally inherited genomes is an unsatisfactory criterion for defining subspecies based upon theoretical (genetic drift) and practical (sampling effort) arguments. This point was illustrated by a re-analysis of a global mitogenomic assessment of fin whales, Balaenoptera physalus spp., published by Archer et al. (2013), which proposed to further subdivide the Northern Hemisphere fin whale subspecies, B. p. physalus. The proposed revision was based upon the detection of spatially distinct monophyly among North Atlantic and North Pacific fin whales in a genealogy based upon complete mitochondrial genome DNA sequences. The extended analysis conducted in this study (1,676 mitochondrial control region, 162 complete mitochondrial genome DNA sequences and 20 microsatellite loci genotyped in 358 samples) revealed that the apparent monophyly among North Atlantic fin whales reported by Archer et al. (2013) to be due to low sample sizes. In conclusion, defining sub-species from monophyly (i.e., the absence of para- or polyphyly) can lead to erroneous conclusions due to relatively “trivial” aspects, such as sampling. Basic population genetic processes (i.e., genetic drift and migration) also affect the time to the most recent common ancestor and hence the probability that individuals in a sample are monophyletic.

Beschreibung: We are grateful to Hanne Jørgensen, Anna Sellas, Mary Beth Rew and Christina Færch-Jensen for technical assistance. We thank Drs. P. E. Rosel and K. D. Mullin (U.S. National Marine Fisheries Service Southeast Fisheries Science Center) and members of the U.S. Northeast and Southeast Region Marine Mammal Stranding Network and its response teams, including the International Fund for Animal Welfare, the Marine Mammal Stranding Center, Mystic Aquarium, the Riverhead Foundation for Marine Research and Preservation (K. Durham) and the Marine Mammal Stranding Program of the University of North Carolina Wilmington for access to fin whale samples from the western North Atlantic. We thank Gisli Vikingsson for providing samples. We are indebted to Dr. Eduardo Secchi for facilitating data sharing. Data collection in the Southern Ocean was conducted under research projects Baleias (CNPq grants 557064/2009-0 and 408096/2013-6), INTERBIOTA (CNPq 407889/2013-2) and INCT-APA (CNPq 574018/2008-5), of the Brazilian Antarctic Program and a contribution by the research consortium ‘Ecology and Conservation of Marine Megafauna – EcoMega-CNPq’. MAS was supported through a FCT Investigator contract funded by POPH, QREN European Social Fund, and Portuguese Ministry for Science and Education. Data collection in the Azores was funded by TRACE-PTDC/MAR/74071/2006 and MAPCET-M2.1.2/F/012/2011 [FEDER, COMPETE, QREN European Social Fund, and Proconvergencia Açores/EU Program]. Fin whale illustration herein is used with the permission of Frédérique Lucas. We acknowledge the Center for Information Technology of the University of Groningen for IT support and access to the Peregrine high performance-computing cluster.

Beschreibung: The reconstruction of past environments by means of macrofossil and pollen analysis is commonly based on the modern ecological preferences of the taxa that may have produced these fossils. Here we present a modelling approach, in which we use modern vegetation–surface height relationships to quantify past surface heights in an Arctic ice-wedge polygon mire. Vegetation composition and ground surface height (GSH) were assessed in a polygon mire near Kytalyk (Northeastern Siberia). Cluster analysis revealed five plant communities, which are clearly separated with respect to ground surface height, frost surface height and coverages of open water and vegetation. Based on the composition of modern vegetation we constructed two sets of potential fossil types (plant macrofossils and pollen), an extensive one and a more restricted one to reflect different conditions of preservation and recognisability. We applied Canonical Correspondence Analysis to model the relationships between potential fossil types and measured GSH. Both models show a strong relationship between modelled and measured GSH values and a high accuracy in prediction. Finally, we used the models to predict GSH values for Holocene peat samples and found a fair correspondence with expert-based multi-proxy reconstruction of wetness conditions, even though only a minor part of the encountered fossils were represented in the GSH models, illustrating the robustness of the approach. Our approach can be used to reconstruct palaeoenvironmental conditions in a more objective way and can serve as a template for further palaeoecological studies.

Beschreibung: The Punta delle Pietre Nere (Gargano, Southern Italy) igneous body is constituted by gabbroic and syenitic rocks with lamprophyric affinity of different age (58 and 62 Ma, respectively). The chemical composition of the minerals clearly indicates that there is no genetic relationship between the two lithotypes, in agreement with their significant age difference. The chemical (trace elements) and Sr-Nd-Pb-isotopic composition of these rocks highlights an “anorogenic” geochemical affinity derived from mixed DMM-HIMU-EM mantle reservoirs, similarly to other Paleogene-Oligocenemagmatic provinces in the Circum-Mediterranean Area. In past literature, these features were interpreted as evidences for enriched asthenospheric mantle plume upwelling from deep regions beneath the Western Europe. Here we suggest that the HIMU-like composition of Punta delle Pietre Nere rocks is related to a lithosphericmantle source bearing amphibole-rich veins, resulting from crystallization of melts within the amphibole stability field in presence of H2O, as shown by several experimental works. Our results suggests partial melting at 70–90 km depth, which corresponds to the spinel-garnet transition (2.5–3.5 GPa) close to the amphibole stability limit (~90–110 km and 2.5–3.5 GPa).

Beschreibung: Published

Beschreibung: 316-328

Beschreibung: 3V. Proprietà chimico-fisiche dei magmi e dei prodotti vulcanici

Beschreibung: JCR Journal

Beschreibung: This article has been accepted for publication in Geophysical Journal International ©: The Authors 2019. Published by Oxford University Press on behalf of the Royal Astronomical Society. All rights reserved. Uploaded in accordance with the publisher's self-archiving policy.

Beschreibung: The Amatrice–Norcia–Visso sequence is characterized by complex behaviour that is somewhat atypical of main-shock–aftershock sequences, as there were multiple large main shocks that continued for months. In this study we focus on the Amatrice sequence (main shock 2016 August 24, Mw = 5.97) to evaluate the apparent stress values and magnitude-dependent scaling in order to improve our knowledge of processes that control small and large earthquakes within this active region of Italy. Apparent stress is proportional to the ratio of radiated seismic energy and seismic moment, and as such, these stress parameters play an important role in hazard prediction as they have a strong effect on the observed and predicted ground shaking. We analyse 83 events of the sequence from 2016 August 24 to October 16, within a radius of 20 km from the main shock and with an Mw ranging between 5.97 and 2.72. Taking advantage of the averaging nature of coda waves, we analyse coda-envelope-based spectral ratios between neighbouring event pairs.We use equations proposed byWalter et al. to consider stable, low-frequency and high-frequency spectral ratio levelswhich provide measures of the corner frequency and apparent stress ratios of the events within the sequence. The results demonstrate non-self-similar behaviour within the sequence, suggesting a change in dynamics between the largest events and the smaller aftershocks. The apparent stress and corner frequency estimates are compared to those obtained by Malagnini and Munaf`o who utilized hundreds of direct S-wave spectral ratio measurements to obtain their results. Although our analysis is based only on 83 events, our results are in very good agreement, demonstrating once more that the use of coda waves is very stable and provides lower variance measures than those using direct waves. A comparison with recent Central Apennines source scaling models derived from various seismic sequences (1997–1998 Colfiorito, 2002 San Giuliano di Puglia, 2009 L’Aquila) shows that the Amatrice sequence source scaling in this study is well represented by the models proposed by Pacor et al. and Malagnini and Mayeda.

Beschreibung: Published

Beschreibung: 446-455

Beschreibung: 3T. Sorgente sismica

Beschreibung: JCR Journal

Beschreibung: Differentiating thermokarst basin sediments with respect to the involved processes and environmental conditions is an important tool to understand permafrost landscape dynamics and scenarios and future trajectories in a warming Arctic and Subarctic. Thermokarst basin deposits have complex sedimentary structures due to the variability of Yedoma source sediments, reworking during the Late Glacial to Holocene climate changes, and different stages of thermokarst history. Here we reconstruct the dynamic growth of thermokarst lakes and basins and related changes of depositional conditions preserved in sediment sequences using a combination of biogeochemical data and robust grain-size endmember analysis (rEMMA). This multi-proxy approach is used on 10 sediment cores (each 300–400 cm deep) from two key thermokarst sites to distinguish four time slices that describe the Holocene thermokarst (lake) basin evolution in Central Yakutia (CY). Biogeochemical proxies and rEMMA reveal fine-grained sedimentation with rather high lake levels and/or reducing conditions, and coarse-grained sedimentation with rather shallow lake levels and/or oxidizing (i.e. terrestrial) conditions in relation to distal and proximal depositional and post-sedimentary conditions. Statistical analysis suggests that the biogeochemical parameters are almost independent of thermokarst deposit sedimentology. Thus, the biogeochemical parameters are considered as signals of secondary (post-sedimentary) reworking. The rEMMA results are clearly reflecting grain-size variations and depositional conditions. This indicates small-scale varying depositional environments, frequently changing lake levels, and predominantly lateral expansion at the edges of rapidly growing small thermokarst lakes and basins. These small bodies finally coalesced, forming the large thermokarst basins we see today in CY. Considering previous paleoenvironmental reconstructions in Siberia, we show the initiation of thaw and subsidence during the Late Glacial to Holocene transition between about 11 and 9 cal kyrs BP, intensive and extensive thermokarst activity for the Holocene Thermal Maximum (HTM) at about 7 to 5 cal kyrs BP, severely fluctuating water levels and further lateral basin growth between 3.5 cal kyrs BP and 1.5 cal kyrs BP, and the cessation of thermokarst activity and extensive frost-induced processes (i.e. permafrost aggradation) after about 1.5 cal kyrs BP. However, gradual permafrost warming over recent decades, in addition to human impacts, has led to renewed high rates of subsidence and abrupt, rapid CY thermokarst processes.

Beschreibung: Author Posting. © American Meteorological Society, 2019. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 49(7), (2019): 1889-1904, doi:10.1175/JPO-D-19-0053.1.

Beschreibung: A high-resolution numerical model, together with in situ and satellite observations, is used to explore the nature and dynamics of the dominant high-frequency (from one day to one week) variability in Denmark Strait. Mooring measurements in the center of the strait reveal that warm water “flooding events” occur, whereby the North Icelandic Irminger Current (NIIC) propagates offshore and advects subtropical-origin water northward through the deepest part of the sill. Two other types of mesoscale processes in Denmark Strait have been described previously in the literature, known as “boluses” and “pulses,” associated with a raising and lowering of the overflow water interface. Our measurements reveal that flooding events occur in conjunction with especially pronounced pulses. The model indicates that the NIIC hydrographic front is maintained by a balance between frontogenesis by the large-scale flow and frontolysis by baroclinic instability. Specifically, the temperature and salinity tendency equations demonstrate that the eddies act to relax the front, while the mean flow acts to sharpen it. Furthermore, the model reveals that the two dense water processes—boluses and pulses (and hence flooding events)—are dynamically related to each other and tied to the meandering of the hydrographic front in the strait. Our study thus provides a general framework for interpreting the short-time-scale variability of Denmark Strait Overflow Water entering the Irminger Sea.

Beschreibung: MAS was supported by the National Science Foundation (NSF) under Grants OCE-1558742 and OCE-1534618. RSP, PL, and DM were supported by NSF under Grants OCE-1558742 and OCE-1259618. WJvA was supported by the Helmholtz Infrastructure Initiative FRAM. TWNH and MA were supported by NSF under Grants OCE-1633124 and OCE-118123.

Beschreibung: 2020-07-01

Beschreibung: Author Posting. © The Authors, 2019. This article is posted here by permission of The Royal Astronomical Society for personal use, not for redistribution. The definitive version was published in Geophysical Journal International 218(3), (2019): 1822-1837, doi: 10.1093/gji/ggz253.

Beschreibung: Joint inversion of multiple electromagnetic data sets, such as controlled source electromagnetic and magnetotelluric data, has the potential to significantly reduce uncertainty in the inverted electrical resistivity when the two data sets contain complementary information about the subsurface. However, evaluating quantitatively the model uncertainty reduction is made difficult by the fact that conventional inversion methods—using gradients and model regularization—typically produce just one model, with no associated estimate of model parameter uncertainty. Bayesian inverse methods can provide quantitative estimates of inverted model parameter uncertainty by generating an ensemble of models, sampled proportional to data fit. The resulting posterior distribution represents a combination of a priori assumptions about the model parameters and information contained in field data. Bayesian inversion is therefore able to quantify the impact of jointly inverting multiple data sets by using the statistical information contained in the posterior distribution. We illustrate, for synthetic data generated from a simple 1-D model, the shape of parameter space compatible with controlled source electromagnetic and magnetotelluric data, separately and jointly. We also demonstrate that when data sets contain complementary information about the model, the region of parameter space compatible with the joint data set is less than or equal to the intersection of the regions compatible with the individual data sets. We adapt a trans-dimensional Markov chain Monte Carlo algorithm for jointly inverting multiple electromagnetic data sets for 1-D earth models and apply it to surface-towed controlled source electromagnetic and magnetotelluric data collected offshore New Jersey, USA, to evaluate the extent of a low salinity aquifer within the continental shelf. Our inversion results identify a region of high resistivity of varying depth and thickness in the upper 500 m of the continental shelf, corroborating results from a previous study that used regularized, gradient-based inversion methods. We evaluate the joint model parameter uncertainty in comparison to the uncertainty obtained from the individual data sets and demonstrate quantitatively that joint inversion offers reduced uncertainty. In addition, we show how the Bayesian model ensemble can subsequently be used to derive uncertainty estimates of pore water salinity within the low salinity aquifer.

Beschreibung: We gratefully acknowledge funding support from National Science Foundation grants 1458392 and 1459035. We thank the captain and crew of the R.V. Marcus G. Langseth for a successful cruise and the Marine EM Lab at Scripps Institution of Oceanography for providing the instrumentation. We also thank Chris Armerding, Marah Dahn, John Desanto, Jimmy Elsenbeck, Matt Folsom, Keiichi Ishizu, Jeff Pepin, Charlotte Wiman and Georgie Zelenak for participating in the cruise. We gratefully acknowledge Alberto Malinverno for the idea to use a Monte Carlo scheme to estimate the distribution of pore fluid salinity, and William Menke for many constructive conversations and suggestions.

Beschreibung: Author Posting. © The Authors, 2019. This article is posted here by permission of The Royal Astronomical Society for personal use, not for redistribution. The definitive version was published in Geophysical Journal International 218(3), (2019): 2122-2135, doi: 10.1093/gji/ggz272.

Beschreibung: We have conducted the first passive Ocean Bottom Seismograph (OBS) experiment near the Challenger Deep at the southernmost Mariana subduction zone by deploying and recovering an array of 6 broad-band OBSs during December 2016–June 2017. The obtained passive-source seismic records provide the first-ever near-field seismic observations in the southernmost Mariana subduction zone. We first correct clock errors of the OBS recordings based on both teleseismic waveforms and ambient noise cross-correlation. We then perform matched filter earthquake detection using 53 template events in the catalogue of the US Geological Survey and find 〉7000 local earthquakes during the 6-month OBS deployment period. Results of the two independent approaches show that the maximum clock drifting was ∼2 s on one instrument (OBS PA01), while the rest of OBS waveforms had negligible time drifting. After timing correction, we locate the detected earthquakes using a newly refined local velocity model that was derived from a companion active source experiment in the same region. In total, 2004 earthquakes are located with relatively high resolution. Furthermore, we calibrate the magnitudes of the detected earthquakes by measuring the relative amplitudes to their nearest relocated templates on all OBSs and acquire a high-resolution local earthquake catalogue. The magnitudes of earthquakes in our new catalogue range from 1.1 to 5.6. The earthquakes span over the Southwest Mariana rift, the megathrust interface, forearc and outer-rise regions. While most earthquakes are shallow, depths of the slab earthquakes increase from ∼100 to ∼240 km from west to east towards Guam. We also delineate the subducting interface from seismicity distribution and find an increasing trend in dip angles from west to east. The observed along-strike variation in slab dip angles and its downdip extents provide new constraints on geodynamic processes of the southernmost Mariana subduction zone.

Beschreibung: We express our appreciation to the science parties and crew members of the R/V Shiyan 3 for deployment and collection of the OBS instruments during the Mariana expeditions. This study is supported by the Hong Kong Research Grant Council Grants (No. 14313816), Faculty of Science at CUHK, Chinese Academy of Sciences (No. Y4SL021001, QYZDY-SSW-DQC005, 133244KYSB20180029), the National Natural Science Foundation of China (No. 41890813, 91628301, 41676042, U1701641, 41576041, 91858207 and U1606401), the National Key R&D Program of China (2018YFC0309800 and 2018YFC0310100). Generic Mapping Tools (Wessel & Smith 1991) and PSSAC (developed by Prof Lupei Zhu) are used for data analysis and figure preparation in this study. Constructive comments from Dr Lidong Bie and two anonymous reviewers are helpful in improving the manuscript.

Beschreibung: Author Posting. © American Meteorological Society, 2018. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Marine Science and Engineering 6(4), (2018): 144. doi:10.3390/jmse6040144.

Beschreibung: Geochronologies derived from sediment cores in coastal locations are often used to infer event bed characteristics such as deposit thicknesses and accumulation rates. Such studies commonly use naturally occurring, short-lived radioisotopes, such as Beryllium-7 (7Be) and Thorium-234 (234Th), to study depositional and post-depositional processes. These radioisotope activities, however, are not generally represented in sediment transport models that characterize coastal flood and storm deposition with grain size patterns and deposit thicknesses. We modified the Community Sediment Transport Modeling System (CSTMS) to account for reactive tracers and used this capability to represent the behavior of these short-lived radioisotopes on the sediment bed. This paper describes the model and presents results from a set of idealized, one-dimensional (vertical) test cases. The model configuration represented fluvial deposition followed by periods of episodic storm resuspension. Sensitivity tests explored the influence on seabed radioisotope profiles by the intensities of bioturbation and wave resuspension and the thickness of fluvial deposits. The intensity of biodiffusion affected the persistence of fluvial event beds as evidenced by 7Be. Both resuspension and biodiffusion increased the modeled seabed inventory of 234Th. A thick fluvial deposit increased the seabed inventory of 7Be and 234Th but mixing over time greatly reduced the difference in inventory of 234Th in fluvial deposits of different thicknesses.

Beschreibung: The Bureau of Ocean Energy Management (BOEM) provided funding for Birchler, Harris, and Kniskern. During his M.S. program Birchler received additional funds from VIMS’ Office of Academic Studies. This work was partially supported by the U.S. Geological Survey, Coastal and Marine Geology Program.

Beschreibung: Author Posting. © The Author(s), 2018. This is the author's version of the work. It is posted here under a nonexclusive, irrevocable, paid-up, worldwide license granted to WHOI. It is made available for personal use, not for redistribution. The definitive version was published in Rudolph, M. L., Sohn, R. A., & Lev, E.. Fluid oscillations in a laboratory geyser with a bubble trap. Journal of Volcanology and Geothermal Research, 368, (2018):100-110. doi:10.1016/j.jvolgeores.2018.11.003.

Beschreibung: Geysers are rare geologic features that episodically erupt water and steam. While it is understood that the eruptions are triggered by the conversion of thermal to kinetic energy during decompression of hot uids, geysers commonly exhibit a range of dynamic behaviors in-between and during eruptions that have yet to be adequately explained. In-situ measurements of temperature and pressure as well as remote geophysical techniques have revealed oscillatory behavior across a range of timescales, ranging from eruption cycles to impulsive bubble collapse events. Many geysers, including Old faithful in Yellowstone National Park, USA, are believed to have o set subsurface reservoirs (referred to as a `bubble trap') that can trap and accumulate noncondensable gas or steam entering the system. The impact of a bubble trap on the dynamic behaviors of the system, however, has not been fully established. We constructed a laboratory bubble trap and performed a series of experiments to study how uids oscillate back and forth between the eruption conduit and laterally-offseet reservoir in-between eruptions. We present a new theoretical model based on Hamiltonian mechanics that successfully predicts the oscillation frequencies observed in our experiments based on the conduit system geometry, the amount of gas that has accumulated in the bubble trap, and the amount of liquid water in the system. We demonstrate that when scaled to Old Faithful Geyser, this mechanism is capable of producing oscillations at the observed frequencies.

Beschreibung: The authors thank Paul Fucile and Glenn Macdonald for engineering support in designing and constructing the laboratory analog geyser rig. Funding for the laboratory geyser was provided by the US National Science Foundation grant EAR-1516361. EL was funded through a RISE award from Columbia University.

Beschreibung: 2019-11-10

Beschreibung: Author Posting. © American Meteorological Society, 2019. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Climate 32(2), (2019): 549-573. doi: 10.1175/JCLI-D-18-0413.1.

Beschreibung: Time series of surface meteorology and air–sea fluxes from the northern Bay of Bengal are analyzed, quantifying annual and seasonal means, variability, and the potential for surface fluxes to contribute significantly to variability in surface temperature and salinity. Strong signals were associated with solar insolation and its modulation by cloud cover, and, in the 5- to 50-day range, with intraseasonal oscillations (ISOs). The northeast (NE) monsoon (DJF) was typically cloud free, with strong latent heat loss and several moderate wind events, and had the only seasonal mean ocean heat loss. The spring intermonsoon (MAM) was cloud free and had light winds and the strongest ocean heating. Strong ISOs and Tropical Cyclone Komen were seen in the southwest (SW) monsoon (JJA), when 65% of the 2.2-m total rain fell, and oceanic mean heating was small. The fall intermonsoon (SON) initially had moderate convective systems and mean ocean heating, with a transition to drier winds and mean ocean heat loss in the last month. Observed surface freshwater flux applied to a layer of the observed thickness produced drops in salinity with timing and magnitude similar to the initial drops in salinity in the summer monsoon, but did not reproduce the salinity variability of the fall intermonsoon. Observed surface heat flux has the potential to cause the temperature trends of the different seasons, but uncertainty in how shortwave radiation is absorbed in the upper ocean limits quantifying the role of surface forcing in the evolution of mixed layer temperature.

Beschreibung: The deployment of the Woods Hole Oceanographic Institution (WHOI) mooring and RW and JTF were supported by the U.S. Office of Naval Research, Grant N00014-13-1-0453. DS acknowledges support from the Ministry of Earth Sciences under India’s National Monsoon Mission. HS acknowledges support from the Office of Naval Research Grants N00014-13-1-0453 and N00014-17-12398. The deployment of the WHOI mooring was done by RV Sagar Nidhi and the recovery by RV Sagar Kanya; the help of the crew and science parties is gratefully acknowledged as is the ongoing support at NIOT in Chennai and by other colleagues in India of this mooring work. The work of the staff of the WHOI Upper Ocean Process Group in the design, building, deployment, and recovery of the mooring and in processing the data is gratefully acknowledged. The software for the wavelet analysis was provided by Torrence and Compo (1998). Feedback on the paper by Dr. Amit Tandon and two anonymous reviewers is gratefully acknowledged. This paper is dedicated to Dr. Frank Bradley.

Beschreibung: 2019-06-28

Beschreibung: Author Posting. © American Meteorological Society, 2019. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography, 49 (2), (2019): 607-630, doi:10.1175/JPO-D-18-0166.1.

Beschreibung: The Lagrangian motion in the eddy field produced from an unstable retrograde jet along the shelf break is studied from idealized numerical experiments with a primitive equation model. The jet is initially in thermal wind balance with a cross-isobath density gradient and is not subjected to any atmospheric forcing. Over the course of the model integration, the jet becomes unstable and produces a quasi-stationary eddy field over a 2-month period. During this period, the cross-slope flow at the shelf break is characterized by along-slope correlation scales of O(10) km and temporal correlation scales of a few days. The relative dispersion of parcels across isobaths is found to increase with time as tb, where 1 〈 b 〈 2. This mixed diffusive–ballistic regime appears to reflect the combined effects of (i) the short length scales of velocity correlation at the shelf break and (ii) the seaward excursion of monopolar and dipolar vortices. Cross-slope dispersion is greater offshore of the front than inshore of the front, as offshore parcels are both subducted onshore below density surfaces and translated offshore with eddies. Nonetheless, the exchange of parcels across the jet remains very limited on the monthly time scale. Particles originating from the bottom experience upward displacements of a few tens of meters and seaward displacements of O(100) km, suggesting that the eddy activity engendered by an unstable along-slope jet provides another mechanism for bottom boundary layer detachment near the shelf edge.

Beschreibung: The author expresses his gratitude to the researchers who contributed to the development and public dissemination of POM [for a list of contributors, see Mellor (2002) and comments in the source code]. Discussions with Kenneth Brink, Hyodae Seo, and Weifeng Zhang have been helpful. Comments provided by Kenneth Brink on a draft are gratefully acknowledged. The criticism from two anonymous reviewers allowed us to better focus the manuscript and to significantly improve its clarity. This work has been supported by Grant OCE-1556400 from the U.S. National Science Foundation.

Beschreibung: 2020-02-18

Beschreibung: Author Posting. © The Authors, 2018. This is the author's version of the work. It is posted here under a nonexclusive, irrevocable, paid-up, worldwide license granted to WHOI. It is made available for personal use, not for redistribution. The definitive version was published in Putland, R. L., Mackiewicz, A. G., & Mensinger, A. F. Localizing individual soniferous fish using passive acoustic monitoring. Ecological Informatics, 48, (2018):60-68. doi: 10.1016/j.ecoinf.2018.08.004.

Beschreibung: Identifying where fish inhabit is a fundamentally important topic in ecology and management allowing acoustically sensitive times and areas to be prioritized. Passive acoustic localization has the benefit of being a non-invasive and non-destructive observational tool, and provides unbiased data on the position and movement of aquatic animals. This study used the time difference of arrivals (TDOA) of sound recordings on a four-hydrophone array to pinpoint the location of male oyster toadfish, Opsanus tau, a cryptic fish that produces boatwhistles to attract females. Coupling the TDOA method with cross correlation of the different boatwhistles, individual toadfish were mapped during dawn (0523–0823), midday (1123–1423), dusk (1723–2023) and night (2323−0223) to examine the relationship between temporal and spatial trends. Seven individual males were identified within 0.5–24.2 m of the hydrophone array and 0.0–18.2 m of the other individuals. Uncertainty in passive acoustics localization was investigated using computer simulations as 〈2.0 m within a bearing of 033 to 148° of the linear hydrophone array. Passive acoustic monitoring is presented as a viable tool for monitoring the positions of soniferous species, like the oyster toadfish. The method used in this study could be applied to a variety of soniferous fishes, without disturbing them or their environment. Understanding the location of fishes can be linked to temporal and environmental parameters to investigate ecological trends, as well as to vessel activity to discuss how individuals' respond to anthropogenic noise.

Beschreibung: We would firstly like to thank the anonymous reviewers for providing helpful comments. We thank John Atkins, Mark Johnson and Ben Schlaer for their guidance in the acoustic localization method used and Emily Fleissner for helping to identify toadfish boatwhistles. We also thank Jenni Stanley for help with initial hydrophone set-up and the Marine Resources Center at MBL for dock space and resources. Funding was provided by National Science Foundation grants IOS 1354745, DOB 1359230 and 1659604 awarded to AFM.

Beschreibung: 2019-08-13

Beschreibung: Author Posting. © The Authors, 2018. This is the author's version of the work. It is posted here under a nonexclusive, irrevocable, paid-up, worldwide license granted to WHOI. It is made available for personal use, not for redistribution. The definitive version was published in Roca-Marti, M., Puigcorbe, V., Friedrich, J., van der Loeff, M. R., Rabe, B., Korhonen, M., Camara-Mor, P., Garcia-Orellana, J., & Masque, P. (2018). Distribution of pb-210 and po-210 in the arctic water column during the 2007 sea-ice minimum: Particle export in the ice-covered basins. Deep-Sea Research Part I-Oceanographic Research Papers, 142, 94-106, doi:10.1016/j.dsr.2018.09.011.

Beschreibung: 210Pb and 210Po are naturally occurring radionuclides that are commonly used as a proxy for particle and carbon export. In this study, the distribution of the 210Po/210Pb pair was investigated in the water column of the Barents, Kara and Laptev Seas and the Nansen, Amundsen and Makarov Basins in order to understand the particle dynamics in the Arctic Ocean during the 2007 sea-ice minimum (August-September). Minimum activities of total 210Pb and 210Po were found in the upper and lower haloclines (approx. 60-130 m), which are partly attributed to particle scavenging over the shelves, boundary current transport and subsequent advection of the water with low 210Pb and 210Po activities into the central Arctic. Widespread and substantial (〉50%) deficits of 210Po with respect to 210Pb were detected from surface waters to 200 m on the shelves, but also in the basins. This was particularly important in the Makarov Basin where, despite very low chlorophyll-a levels, estimates of annual new primary production were three times higher than in the Eurasian Basin. In the Nansen, Amundsen and Makarov 32 Basins, estimates of annual new primary production correlated with the deficits of 210Po in the upper 200 m of the water column, suggesting that in situ production and subsequent export of biogenic material were the mechanisms that controlled the removal of 210Po in the central Arctic. Unlike 210Po, 234Th deficits measured during the same expedition were found to be very small and not significant below 25 m in the basins (Cai et al., 2010), which indicates, given the shorter half-life of 234Th, that particle export fluxes in the central Arctic would have been higher before July-August in 2007 than later in the season.

Beschreibung: We would like to thank the crew of the R/V Polarstern and the scientists on board for their cooperation during the ARK-XXII/2 expedition. We greatly appreciate the hard work of Oliver Lechtenfeld who collected and processed the samples on board. Thanks to Dorothea Bauch for sharing her results on freshwater origin and Adam Ulfsbo for providing insightful comments on the estimates of primary production. This project was partly supported by the Ministerio de Ciencia e Innovación (CTM2011-28452, Spain). We wish to acknowledge the support of the Generalitat de Catalunya to the research group MERS (2017 SGR-1588). This work is contributing to the ICTA ‘Unit of Excellence’ (MinECo, MDM2015-0552). M.R.-M. was supported by a Spanish PhD fellowship (AP2010-2510) and an Australian postdoctoral fellowship (2017 Endeavour Research Fellowship).

Beschreibung: 2019-10-22

Beschreibung: A network of shear zones that evolved through the brittle-ductile transition is exposed in the Calamita Schists, Elba Island, Italy. The shear zones formed during Late Miocene contractional deformation coeval with high grade contact metamorphism (∼650 °C) related to the emplacement of plutonic rocks at shallow crustal levels (∼7–10 Km). An early stage high metamorphic grade foliation was overprinted by mylonitic deformation that progressively localized on low-metamorphic grade shear bands producing S-C mylonites during cooling of contact aureole. Localization of deformation on shear bands was driven by temperature decrease that triggered strain partitioning between ‘hard’ high grade relics and ‘soft’ shear bands. Softening of shear bands occurred likely due to fluid influx and retrograde growth of fine-grained phyllosilicates. The interconnection of anastomosing shear bands and passive rotation of the relic high grade foliation caused widening of the shear bands producing mylonites with a composite mylonitic foliation and C′ shear bands. An estimate of the vorticity number Wk of the flow of ∼0.3–0.5 was obtained from the orientation of C′ shear bands measured at the meso- and thin sectionscale. Close to the brittle-ductile transition, the growth of soft phyllosilicates allowed C′ shear bands to act as precursory structures to brittle deformation localized into an array of low-angle faults and shear fractures.

Beschreibung: Published

Beschreibung: 100-114

Beschreibung: 1T. Struttura della Terra

Beschreibung: JCR Journal

Beschreibung: To obtain a 3-D crustal density and shear-wave velocity structure beneath the Po plain we exploit seismic records gathered from 2006 to 2014 and Bouguer gravity data assembled for the last estimation of the Italian Geoid. 2-D maps for both Love and Rayleigh fundamental mode at periods between 4 and 20 s are obtained applying a tomographic inversion. The defined local dispersion curves are then jointly inverted using a linearized scheme to obtain a 3-D isotropic shear-wave velocity model across the Po plain region. The model, transformed into density through a priori velocity-density relationships, is then the input of the Sequential Integrated Inversion algorithm, which enables us to recover a new 3-D density-shear wave velocity coupling and inferences on the lithology and tectonics. Low and fast S-wave velocities are highlighted for the shallow Pliocene–Quaternary sediments along the foredeep, in front of the Northern Apennines, and for the presence of limestone units in the upper crust, respectively. Whereas sediment trends seem to be consistent with the results obtained, the Mesozoic carbonates, which are inherently characterized by high variability, are less resolved. A major result is the recovery of a high speed (3.3 km/s) - density (2.2 kg/m3) structure in the upper crust (6–10 km) localized beneath the arcuate Po plain thrust front expanding from the external margin of the Ferrara arc toward the Alps and the Adriatic Sea. At the boundaries of this brittle body, we locate earthquakes of the Emilia 2012 seismic sequence and the historical seismicity. Mapping lateral discontinuities in density and shear wave velocity could provide insights in defining strengthening and weakening zones, and in focusing on transition zones often prone to earthquakes.

Beschreibung: Published

Beschreibung: 262-279

Beschreibung: 2TR. Ricostruzione e modellazione della struttura crostale

Beschreibung: JCR Journal

Beschreibung: The Aurelian Mammal Age for peninsular Italy was introduced on the basis of faunal assemblages mainly recovered at sites along the Via Aurelia west of Rome. These sites exposed a set of sedimentary deposits currently attributed to the Aurelia and to the Vitinia Formations correlated with MIS 9 and MIS 7, respectively. In the present paper we reconstruct the geologic-stratigraphic setting in the western sector of Rome within the wider context of glacio-eustatically controlled, geochronologically constrained aggradational successions defined for this region. We present a chronostratigraphic study based on dedicated field surveys, that, combined with five new 40Ar/39Ar ages and eighteen trace-element and EMP glass analyses of volcanic products, allow us to revise age and correlation with the Marine Isotopic Stages for 10 sites out of 12 previously attributed to the Aurelia Formation and the Torre in Pietra Faunal Unit. In particular, we demonstrate a MIS 13/MIS 11 age for several sections along the Via Aurelia between Malagrotta and Castel di Guido. Based on this new geochronological framework, the first occurrences of Canis lupus and Vulpes vulpes in Italy are antedated to MIS 11, within the Fontana Ranuccio Faunal Unit of the Galerian Mammal Age, consistent with the wider European context. This contribution is intended as the groundwork for a revision of the Middle Pleistocene Mammal Ages of the Italian peninsula, according to the improved chronostratigraphy of the geologic sections hosting the faunal assemblages.

Beschreibung: Published

Beschreibung: 173-199

Beschreibung: 5A. Paleoclima e ricerche polari

Beschreibung: JCR Journal

Beschreibung: Author Posting. © American Meteorological Society, 2019. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 49(6), (2019): 1577-1592, doi:10.1175/JPO-D-18-0124.1.

Beschreibung: The main source feeding the abyssal circulation of the North Pacific is the deep, northward flow of 5–6 Sverdrups (Sv; 1 Sv ≡ 106 m3 s−1) through the Samoan Passage. A recent field campaign has shown that this flow is hydraulically controlled and that it experiences hydraulic jumps accompanied by strong mixing and dissipation concentrated near several deep sills. By our estimates, the diapycnal density flux associated with this mixing is considerably larger than the diapycnal flux across a typical isopycnal surface extending over the abyssal North Pacific. According to historical hydrographic observations, a second source of abyssal water for the North Pacific is 2.3–2.8 Sv of the dense flow that is diverted around the Manihiki Plateau to the east, bypassing the Samoan Passage. This bypass flow is not confined to a channel and is therefore less likely to experience the strong mixing that is associated with hydraulic transitions. The partitioning of flux between the two branches of the deep flow could therefore be relevant to the distribution of Pacific abyssal mixing. To gain insight into the factors that control the partitioning between these two branches, we develop an abyssal and equator-proximal extension of the “island rule.” Novel features include provisions for the presence of hydraulic jumps as well as identification of an appropriate integration circuit for an abyssal layer to the east of the island. Evaluation of the corresponding circulation integral leads to a prediction of 0.4–2.4 Sv of bypass flow. The circulation integral clearly identifies dissipation and frictional drag effects within the Samoan Passage as crucial elements in partitioning the flow.

Beschreibung: This work was supported by the National Science Foundation under Grants OCE-1029268, OCE-1029483, OCE-1657264, OCE-1657870, OCE-1658027, and OCE-1657795. We thank the captain, crew, and engineers at APL/UW for their hard work and skill.

Beschreibung: 2020-06-11

Beschreibung: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Luis, K. M. A., Rheuban, J. E., Kavanaugh, M. T., Glover, D. M., Wei, J., Lee, Z., & Doney, S. C. Capturing coastal water clarity variability with Landsat 8. Marine Pollution Bulletin, 145, (2019): 96-104, doi: 10.1016/j.marpolbul.2019.04.078.

Beschreibung: Coastal water clarity varies at high temporal and spatial scales due to weather, climate, and human activity along coastlines. Systematic observations are crucial to assessing the impact of water clarity change on aquatic habitats. In this study, Secchi disk depths (ZSD) from Boston Harbor, Buzzards Bay, Cape Cod Bay, and Narragansett Bay water quality monitoring organizations were compiled to validate ZSD derived from Landsat 8 (L8) imagery, and to generate high spatial resolution ZSD maps. From 58 L8 images, acceptable agreement was found between in situ and L8 ZSD in Buzzards Bay (N = 42, RMSE = 0.96 m, MAPD = 28%), Cape Cod Bay (N = 11, RMSE = 0.62 m, MAPD = 10%), and Narragansett Bay (N = 8, RMSE = 0.59 m, MAPD = 26%). This work demonstrates the value of merging in situ ZSD with high spatial resolution remote sensing estimates for improved coastal water quality monitoring.

Beschreibung: This work was supported by the John D. and Catherine T. MacArthur Foundation (grant 14-106159-000-CFP) and by the National Science Foundation grant DGE 1249946, Integrative Graduate Education and Research Traineeship (IGERT): Coasts and Communities – Natural and Human Systems in Urbanizing Environments. Lastly, we are indebted to the Massachusetts Water Resources Authority, Buzzards Bay Coalition, Provincetown Center for Coastal Studies, Narragansett Bay Commission, and the numerous citizen scientists responsible for collecting the in situ measurements used in this study. Comments and suggestions from our anonymous reviewer were greatly appreciated.

Beschreibung: Author Posting. © American Meteorological Society, 2019. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 49(9), (2019): 2337-2343, doi:10.1175/JPO-D-19-0097.1.

Beschreibung: The weakly unstable, two-layer model of baroclinic instability is studied in a configuration in which the flow is perturbed at the inflow section of a channel by a slow and periodic perturbation. In a parameter regime where the governing equation would be the Lorenz equations for chaos if the development occurs only in time, the solution behavior becomes considerably more complex as a function of time and downstream coordinate. In the absence of the beta effect it has earlier been shown that the chaotic behavior along characteristics renders the solution nearly discontinuous in the slow downstream coordinate of the asymptotic model. The additional presence of the beta effect, although expunging the chaos for large enough values of the beta parameter, also provides an additional mechanism for abrupt spatial change.

Beschreibung: 2020-02-28

Beschreibung: Author Posting. © The Author(s), 2019. This is the author's version of the work. It is posted here by permission of Oxford University Press for personal use, not for redistribution. The definitive version was published in ICES Journal of Marine Science 76(4), (2010): 781-786, doi:10.1093/icesjms/fsy194.

Beschreibung: Whales are federally protected by the Marine Mammal Protection Act; endangered species, such as the North Atlantic right whale, receive additional protection under the Endangered Species Act. However, their regulations have failed to satisfy conservation and animal welfare concerns. From 1990 to 2011 the North Atlantic right whale (Eubalaena glacialis, NARW) population grew at a mean of 2.8% annually. However, population trends reversed since 2011; the species is in decline, with only ∼100 reproductively active females remaining. This failure is driven by vessel collisions and increasingly fatal and serious entanglement in fixed fishing gear, whose rope strength has increased substantially. Chronic entanglement, drag, and associated morbidity have been linked to poor fecundity. Genuine solutions involve designating areas to be avoided and speed restrictions for ships and removing fishing trap ropes from the water column. A trap fishing closure for NARW habitat in the Cape Cod Bay (U.S.) area has been in place seasonally since 2015. 2017 mortalities in Eastern Canada elicited substantive management changes whereby the 2018 presence of NARW in active trap fishing areas resulted in an effective closure. To avoid these costly closures, the traditional trap fishery model of rope end lines attached to surface marker buoys has to be modified so that traps are marked virtually, and retrieved with gear that does not remain in the water column except during trap retrieval. Consumer demand for genuinely whale-safe products will augment and encourage the necessary regulatory changes so that trap fisheries conserve target and nontarget species.

Beschreibung: I thank Mark Baumgartner, Scott Kraus, Tim Werner, Amy Knowlton, Heather Pettis, Scott Landry, Stormy Mayo, Fred Penney, and Beth Casoni for discussions on this topic and Natalie Renier for drawing Figures 5 and 6. Funding was provided by the Woods Hole Oceanographic Institution Independent Research and Development Program.

Beschreibung: 2020-01-10

Beschreibung: Author Posting. © American Meteorological Society, 2019. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of the Atmospheric Sciences 76(10), (2019): 3013-3027, doi:10.1175/JAS-D-19-0095.1.

Beschreibung: Recently Nakamura and Huang proposed a semiempirical, one-dimensional model of atmospheric blocking based on the observed budget of local wave activity in the boreal winter. The model dynamics is akin to that of traffic flow, wherein blocking manifests as traffic jams when the streamwise flux of local wave activity reaches capacity. Stationary waves modulate the jet stream’s capacity to transmit transient waves and thereby localize block formation. Since the model is inexpensive to run numerically, it is suited for computing blocking statistics as a function of climate variables from large-ensemble, parameter sweep experiments. We explore sensitivity of blocking statistics to (i) stationary wave amplitude, (ii) background jet speed, and (iii) transient eddy forcing, using frequency, persistence, and prevalence as metrics. For each combination of parameters we perform 240 runs of 180-day simulations with aperiodic transient eddy forcing, each time randomizing the phase relations in forcing. The model climate shifts rapidly from a block-free state to a block-dominant state as the stationary wave amplitude is increased and/or the jet speed is decreased. When eddy forcing is increased, prevalence increases similarly but frequency decreases as blocks merge and become more persistent. It is argued that the present-day climate lies close to the boundary of the two states and hence its blocking statistics are sensitive to climate perturbations. The result underscores the low confidence in GCM-based assessment of the future trend of blocking under a changing climate, while it also provides a theoretical basis for evaluating model biases and understanding trends in reanalysis data.

Beschreibung: The main results of this paper emerged from a group project during Rossbypalooza, a student-led summer school at the University of Chicago in June 2018, with the theme of “Understanding climate through simple models.” The authors thank the participants of the summer school for their valuable feedback. Constructive criticisms of the two anonymous reviewers greatly improved the quality of the manuscript. The work is supported by NSF Grants AGS1563307 and AGS1810964

Beschreibung: Author Posting. © American Meteorological Society, 2019. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 49(7), (2019): 1973-1994, doi: 10.1175/JPO-D-18-0194.1.

Beschreibung: Using 18 days of field observations, we investigate the diurnal (D1) frequency wave dynamics on the Tasmanian eastern continental shelf. At this latitude, the D1 frequency is subinertial and separable from the highly energetic near-inertial motion. We use a linear coastal-trapped wave (CTW) solution with the observed background current, stratification, and shelf bathymetry to determine the modal structure of the first three resonant CTWs. We associate the observed D1 velocity with a superimposed mode-zero and mode-one CTW, with mode one dominating mode zero. Both the observed and mode-one D1 velocity was intensified near the thermocline, with stronger velocities occurring when the thermocline stratification was stronger and/or the thermocline was deeper (up to the shelfbreak depth). The CTW modal structure and amplitude varied with the background stratification and alongshore current, with no spring–neap relationship evident for the observed 18 days. Within the surface and bottom Ekman layers on the shelf, the observed velocity phase changed in the cross-shelf and/or vertical directions, inconsistent with an alongshore propagating CTW. In the near-surface and near-bottom regions, the linear CTW solution also did not match the observed velocity, particularly within the bottom Ekman layer. Boundary layer processes were likely causing this observed inconsistency with linear CTW theory. As linear CTW solutions have an idealized representation of boundary dynamics, they should be cautiously applied on the shelf.

Beschreibung: An Australian Research Council Discovery Project (DP 140101322), and a UWA Research Collaboration Award funded this work. T. L. Schlosser acknowledges the support of an Australian Government Research Training Program (RTP) Scholarship. We thank the crew, volunteers and scientists who aided in the field data collection aboard the R/V Revelle, which was funded by the National Science Foundation (OCE-1129763). The continental slope moorings, T4 (M32) and T3 (M44), were also funded by the National Science Foundation (OCE-1129763) and were conceived, planned, and executed by Matthew Alford, Jennifer Mackinnon, Jonathan Nash, Harper Simmons, and Gunnar Voet. We also thank Harper Simmons for the combined R/V Revelle multibeam and Geoscience Australia bathymetry used in this study. We thank the two anonymous reviewers whose comments improved this work.

Beschreibung: 2020-01-16

Beschreibung: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Semper, S., Vage, K., Pickart, R. S., Valdimarsson, H., Torres, D. J., & Jonsson, S. The emergence of the North Icelandic Jet and its evolution from northeast Iceland to Denmark Strait. Journal of Physical Oceanography, 49(10), (2019): 2499-2521, doi:10.1175/JPO-D-19-0088.1.

Beschreibung: The North Icelandic Jet (NIJ) is an important source of dense water to the overflow plume passing through Denmark Strait. The properties, structure, and transport of the NIJ are investigated for the first time along its entire pathway following the continental slope north of Iceland, using 13 hydrographic/velocity surveys of high spatial resolution conducted between 2004 and 2018. The comprehensive dataset reveals that the current originates northeast of Iceland and increases in volume transport by roughly 0.4 Sv (1 Sv ≡ 106 m3 s−1) per 100 km until 300 km upstream of Denmark Strait, at which point the highest transport is reached. The bulk of the NIJ transport is confined to a small area in Θ–S space centered near −0.29° ± 0.16°C in Conservative Temperature and 35.075 ± 0.006 g kg−1 in Absolute Salinity. While the hydrographic properties of this transport mode are not significantly modified along the NIJ’s pathway, the transport estimates vary considerably between and within the surveys. Neither a clear seasonal signal nor a consistent link to atmospheric forcing was found, but barotropic and/or baroclinic instability is likely active in the current. The NIJ displays a double-core structure in roughly 50% of the occupations, with the two cores centered at the 600- and 800-m isobaths, respectively. The transport of overflow water 300 km upstream of Denmark Strait exceeds 1.8 ± 0.3 Sv, which is substantially larger than estimates from a year-long mooring array and hydrographic/velocity surveys closer to the strait, where the NIJ merges with the separated East Greenland Current. This implies a more substantial contribution of the NIJ to the Denmark Strait overflow plume than previously envisaged.

Beschreibung: Six different research vessels were involved in the collection of the data used in this study: RRS James Clark Ross, R/V Knorr, R/V Bjarni Sæmundsson, R/V Håkon Mosby, NRV Alliance, and R/V Kristine Bonnevie. We thank the captain and crew of each of these vessels for their hard work as well as the many watch standers who have sailed on the cruises and helped collect the measurements. We also thank Frank Bahr for processing the VMADCP data collected on NRV Alliance and Magnús Danielsen for the processing of the hydrographic data collected on R/V Bjarni Sæmundsson. We acknowledge Leah Trafford McRaven for assistance with Fig. 1 and two anonymous reviewers for their helpful comments, which improved the manuscript. Funding for the project was provided by the Bergen Research Foundation Grant BFS2016REK01 (K. Våge and S. Semper), the Norwegian Research Council under Grant Agreement 231647 (K. Våge), and the U.S. National Science Foundation Grants OCE-1259618 and OCE-1756361 (R. S. Pickart and D. J. Torres), as well as OCE-1558742 (R. S. Pickart). The dataset is available on PANGAEA under https://doi.pangaea.de/10.1594/PANGAEA.903535.

Beschreibung: Author Posting. © American Meteorological Society, 2019. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Climate 32(13), (2019): 3883-3898, doi:10.1175/JCLI-D-18-0735.1.

Beschreibung: While it has generally been understood that the production of Labrador Sea Water (LSW) impacts the Atlantic meridional overturning circulation (MOC), this relationship has not been explored extensively or validated against observations. To explore this relationship, a suite of global ocean–sea ice models forced by the same interannually varying atmospheric dataset, varying in resolution from non-eddy-permitting to eddy-permitting (1°–1/4°), is analyzed to investigate the local and downstream relationships between LSW formation and the MOC on interannual to decadal time scales. While all models display a strong relationship between changes in the LSW volume and the MOC in the Labrador Sea, this relationship degrades considerably downstream of the Labrador Sea. In particular, there is no consistent pattern among the models in the North Atlantic subtropical basin over interannual to decadal time scales. Furthermore, the strong response of the MOC in the Labrador Sea to LSW volume changes in that basin may be biased by the overproduction of LSW in many models compared to observations. This analysis shows that changes in LSW volume in the Labrador Sea cannot be clearly and consistently linked to a coherent MOC response across latitudes over interannual to decadal time scales in ocean hindcast simulations of the last half century. Similarly, no coherent relationships are identified between the MOC and the Labrador Sea mixed layer depth or the density of newly formed LSW across latitudes or across models over interannual to decadal time scales.

Beschreibung: FL and MSL are thankful for the financial support from the National Science Foundation (NSF) Physical Oceanography Program (NSF-OCE-12-59102, NSF-OCE-12-59103). The NCAR contribution was supported by the National Oceanic and Atmospheric Administration (NOAA) Climate Program Office (CPO) under Climate Variability and Predictability Program (CVP) Grant NA13OAR4310138 and by the NSF Collaborative Research EaSM2 Grant OCE-1243015. NCAR is sponsored by the NSF. NPH is supported by NERC programs U.K. OSNAP (NE/K010875) and ACSIS (National Capability, NE/N018044/1). Y-OK is supported by NOAA CPO CVP (NA17OAR4310111) and NSF EaSM2 grant (OCE-1242989). AR is supported by NASA-ROSES Modeling, Analysis and Prediction 2016 NNX16AC93G-MAP. RZ is supported by NOAA/OAR. Argo data were collected and made freely available by the International Argo Program and the national programs that contribute to it (http://www.argo.ucsd.edu, http://argo.jcommops.org). The Argo Program is part of the Global Ocean Observing System (http://doi.org/10.17882/42182). Data from the RAPID-MOCHA-WBTS array funded by NERC, NSF and NOAA are freely available from www.rapid.ac.uk/rapidmoc. We thank Stephen Griffies for providing access to the GFDL-MOM025 COREII simulation output and Matthew Harrison and Xiaoqin Yan for their comments on the manuscript. We also thank the anonymous reviewers for their valuable comments.

Beschreibung: 2020-06-11

Beschreibung: Author Posting. © American Meteorological Society, 2019. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 49(9), (2019): 2237-2254, doi: 10.1175/JPO-D-18-0181.1.

Beschreibung: A cluster of 45 drifters deployed in the Bay of Bengal is tracked for a period of four months. Pair dispersion statistics, from observed drifter trajectories and simulated trajectories based on surface geostrophic velocity, are analyzed as a function of drifter separation and time. Pair dispersion suggests nonlocal dynamics at submesoscales of 1–20 km, likely controlled by the energetic mesoscale eddies present during the observations. Second-order velocity structure functions and their Helmholtz decomposition, however, suggest local dispersion and divergent horizontal flow at scales below 20 km. This inconsistency cannot be explained by inertial oscillations alone, as has been reported in recent studies, and is likely related to other nondispersive processes that impact structure functions but do not enter pair dispersion statistics. At scales comparable to the deformation radius LD, which is approximately 60 km, we find dynamics in agreement with Richardson’s law and observe local dispersion in both pair dispersion statistics and second-order velocity structure functions.

Beschreibung: This research was supported by the Air Sea Interaction Regional Initiative (ASIRI) under ONR Grant N00014-13-1-0451 (SE and AM) and ONR Grant N00014-13-1-0477 (VH and LC). Additionally, AM and SE thank NSF (Grant OCE-I434788) and ONR (Grant N00014-16-1-2470) for support; VH and LC were further supported by ONR Grant N00014-15-1-2286 and NOAA GDP Grant NA10OAR4320156. We thank Joe LaCasce, Dhruv Balwada, and one anonymous reviewer for helpful comments and discussions that significantly improved this manuscript. The authors thank the captain and crew of the R/V Roger Revelle. The SVP-type drifters are part of the Global Drifter Program and supported by ONR Grant N00014-15-1-2286 and NOAA GDP Grant NA10OAR4320156 and are available under http://www.aoml.noaa.gov/phod/dac/. The Ssalto/Duacs altimeter products were produced and distributed by the Copernicus Marine and Environment Monitoring Service (CMEMS, http://www.marine.copernicus.eu).

Beschreibung: Author Posting. © The Author(s), 2019. This is the author's version of the work. It is posted here by permission of Oxford University Press for personal use, not for redistribution. The definitive version was published in Geophysical Journal International, 219(1), (2019): 464-478, doi:10.1093/gji/ggz315.

Beschreibung: The electromagnetic (EM) field generated by ocean tidal flow is readily detectable in both satellite magnetic field data, and in ocean-bottom measurements of electric and magnetic fields. The availability of accurate charts of tidal currents, constrained by assimilation of modern satellite altimetry data, opens the possibility of using tidal EM fields as a source to image mantle electrical resistivity beneath the ocean basins, as highlighted by the recent success in defining the globally averaged lithosphere–asthenosphere boundary (LAB) with satellite data. In fact, seafloor EM data would be expected to provide better constraints on the structure of resistive oceanic lithosphere, since the toroidal magnetic mode, which can constrain resistive features, is a significant component of the tidal EM field within the ocean, but is absent above the surface (in particular in satellite data). Here we consider this issue in more detail, using a combination of simplified theoretical analysis and 1-D and 3-D numerical modelling to provide a thorough discussion of the sensitivity of satellite and seafloor data to subsurface electrical structure. As part of this effort, and as a step toward 3-D inversion of seafloor tidal data, we have developed a new flexible 3-D spherical-coordinate finite difference scheme for both global and regional scale modelling, with higher resolution models nested in larger scale solutions. We use the new 3-D model, together with Monte Carlo simulations of errors in tidal current estimates, to provide a quantitative assessment of errors in the computed tidal EM signal caused by uncertainty in the tidal source. Over the open ocean this component of error is below 0.01 nT in Bz at satellite height and 0.05 nT in Bx on the seafloor, well below typical signal levels. However, as coastlines are approached error levels can increase substantially. Both analytical and 3-D modelling demonstrate that the seafloor magnetic field is most sensitive to the lithospheric resistance (the product of resistivity and thickness), and is more weakly influenced (primarily in the phase) by resistivity of the underlying asthenosphere. Satellite data, which contain only the poloidal magnetic mode, are more sensitive to the conductive asthenosphere, but have little sensitivity to lithospheric resistance. For both seafloor and satellite data’s changes due to plausible variations in Earth parameters are well above error levels associated with source uncertainty, at least in the ocean interior. Although the 3-D modelling results are qualitatively consistent with theoretical analysis, the presence of coastlines and bathymetric variations generates a complex response, confirming that quantitative interpretation of ocean tidal EM fields will require a 3-D treatment. As an illustration of the nested 3-D scheme, seafloor data at five magnetic and seven electric stations in the northeastern Pacific (41○N, 165○W) are fit with trial-and-error forward modelling of a local domain. The simulation results indicate that the lithospheric resistance is roughly 7 × 108 Ωm2. The phase of the seafloor data in this region are inconsistent with a sharp transition between the resistive lithosphere and conductive asthenosphere.

Beschreibung: This work has been supported by National Natural Science Foundation of China grants 41804072 and 41574104, and NSF grant EAR-1447109. Special thanks to Dr Benjamin Murphy who provided the conductivity-depth profile for 1-D earth model, Dr Min Ding who provided valuable discussion about the oceanic lithosphere and Dr Jeffery Love who provided comments on the stylistics of the manuscript.

Beschreibung: Author Posting. © American Meteorological Society, 2019. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of the Atmospheric and Oceanic Technology 36(10), (2019): 1997-2014, doi: 10.1175/JTECH-D-19-0029.1.

Beschreibung: While land-based high-frequency (HF) radars are the only instruments capable of resolving both the temporal and spatial variability of surface currents in the coastal ocean, recent high-resolution views suggest that the coastal ocean is more complex than presently deployed radar systems are able to reveal. This work uses a hybrid system, having elements of both phased arrays and direction finding radars, to improve the azimuthal resolution of HF radars. Data from two radars deployed along the U.S. East Coast and configured as 8-antenna grid arrays were used to evaluate potential direction finding and signal, or emitter, detection methods. Direction finding methods such as maximum likelihood estimation generally performed better than the well-known multiple signal classification (MUSIC) method given identical emitter detection methods. However, accurately estimating the number of emitters present in HF radar observations is a challenge. As MUSIC’s direction-of-arrival (DOA) function permits simple empirical tests that dramatically aid the detection process, MUSIC was found to be the superior method in this study. The 8-antenna arrays were able to provide more accurate estimates of MUSIC’s noise subspace than typical 3-antenna systems, eliminating the need for a series of empirical parameters to control MUSIC’s performance. Code developed for this research has been made available in an online repository.

Beschreibung: This analysis was supported by NSF Grants OCE-1657896 and OCE-1736930 to Kirincich, OCE-1658475 to Emery and Washburn and OCE-1736709 to Flament. Flament is also supported by NOAA’s Integrated Ocean Observing System through Award NA11NOS0120039. The authors thank Lindsey Benjamin, Alma Castillo, Ken Constantine, Benedicte Dousset, Ian Fernandez, Mael Flament, Dave Harris, Garrett Hebert, Ben Hodges, Victoria Futch, Matt Guanci, and Philip Moravcik for assistance in building, deploying, and operating the radars.

Beschreibung: 2020-04-11

Beschreibung: Author Posting. © American Meteorological Society, 2017. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Atmospheric and Oceanic Technology 34 (2017): 2673-2682, doi:10.1175/JTECH-D-17-0054.1.

Beschreibung: Expendable bathythermographs (XBT) to profile upper-ocean temperatures from vessels in motion have been in use for some 50 years now. Developed originally for navy use, they were soon adapted by oceanographers to map out upper-ocean thermal structure and its space–-time variability from both research vessels and merchant marine vessels in regular traffic. These activities continue today. This paper describes a new technology—the Autonomous Expendable Instrument System (AXIS)—that has been developed to provide the capability to deploy XBT probes on a predefined schedule, or adaptively in response to specific events without the presence of an observer on board. AXIS is a completely self-contained system that can hold up to 12 expendable probes [XBTs, XCTDs, expendable sound velocimeter (XSV)] in any combination. A single-board Linux computer keeps track of what probes are available, takes commands from ashore via Iridium satellite on what deployment schedule to follow, and records and forwards the probe data immediately with a time stamp and the GPS position. This paper provides a brief overview of its operation, capabilities, and some examples of how it is improving coverage along two lines in the Atlantic.

Beschreibung: Initial development of AXIS mechanical design elements wasmade possible by awards from the Cecil H. and Ida M. Green Technology Innovation Fund and the Sealark Foundation to the team of Dave Fratantoni, Keith von der Heydt (WHOI), and Terry Hammar (WHOI). Construction of the first full AXIS prototype was supported by a technology grant from the National Science Foundation (OCE-0926853) and the second one through an NSF-funded (OCE-1061185) subcontract from the University of Rhode Island.

Beschreibung: 2018-06-28

Beschreibung: Author Posting. © American Meteorological Society, 2017. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 47 (2017): 879-894, doi:10.1175/JPO-D-16-0196.1.

Beschreibung: Models show that surface cooling over a sloping continental shelf should give rise to baroclinic instability and thus tend toward gravitationally stable density stratification. Less is known about how alongshore winds affect this process, so the role of surface momentum input is treated here by means of a sequence of idealized, primitive equation numerical model calculations. The effects of cooling rate, wind amplitude and direction, bottom slope, bottom friction, and rotation rate are all considered. All model runs lead to instability and an eddy field. While instability is not strongly affected by upwelling-favorable alongshore winds, wind-driven downwelling substantially reduces eddy kinetic energy, largely because the downwelling circulation plays a similar role to baroclinic instability by flattening isotherms and so reducing available potential energy. Not surprisingly, cross-shelf winds appear to have little effect. Analysis of the model runs leads to quantitative relations for the wind effect on eddy kinetic energy for the equilibrium density stratification (which increases as the cooling rate increases) and for eddy length scale.

Beschreibung: This research was supported by the National Science Foundation Physical Oceanography Program through Grant OCE-1433953.

Beschreibung: Author Posting. © American Meteorological Society, 2018. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Bulletin of the American Meteorological Society 99 (2018): 61-82, doi:10.1175/BAMS-D-16-0254.1.

Beschreibung: Accurate estimation of the climate sensitivity requires a better understanding of the nexus between polar marine ecosystem responses to warming, changes in sea ice extent, and emissions of marine biogenic aerosol (MBA). Sea ice brine channels contain very high concentrations of MBA precursors that, once ventilated, have the potential to alter cloud microphysical properties, such as cloud droplet number, and the regional radiative energy balance. In contrast to temperate latitudes, where the pelagic phytoplankton are major sources of MBAs, the seasonal sea ice dynamic plays a key role in determining MBA concentration in both the Arctic and Antarctic. We review the current knowledge of MBA sources and the link between ice melt and emissions of aerosol precursors in the polar oceans. We illustrate the processes by examining decadal-scale time series in various satellite-derived parameters such as aerosol optical depth (AOD), sea ice extent, and phytoplankton biomass in the sea ice zones of both hemispheres. The sharpest gradients in aerosol indicators occur during the spring period of ice melt. In sea ice–covered waters, the peak in AOD occurs well before the annual maximum in biomass in both hemispheres. The results provide strong evidence that suggests seasonal changes in sea ice and ocean biology are key drivers of the polar aerosol cycle. The positive trend in annual-mean Antarctic sea ice extent is now almost one-third of the magnitude of the annual-mean decrease in Arctic sea ice, suggesting the potential for different patterns of aerosol emissions in the future.

Beschreibung: Matrai and Middleton were supported by the National Science Foundation (PLR-1417517). Jones was partially funded by a grant from the Australian Research Council (DP150101649).

Beschreibung: Author Posting. © American Meteorological Society, 2017. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 47 (2017): 855-866, doi:10.1175/JPO-D-16-0194.1.

Beschreibung: Mesoscale eddies shape the Beaufort Gyre response to Ekman pumping, but their transient dynamics are poorly understood. Climate models commonly use the Gent–McWilliams (GM) parameterization, taking the eddy streamfunction to be proportional to an isopycnal slope s and an eddy diffusivity K. This local-in-time parameterization leads to exponential equilibration of currents. Here, an idealized, eddy-resolving Beaufort Gyre model is used to demonstrate that carries a finite memory of past ocean states, violating a key GM assumption. As a consequence, an equilibrating gyre follows a spiral sink trajectory implying the existence of a damped mode of variability—the eddy memory (EM) mode. The EM mode manifests during the spinup as a 15% overshoot in isopycnal slope (2000 km3 freshwater content overshoot) and cannot be explained by the GM parameterization. An improved parameterization is developed, such that is proportional to an effective isopycnal slope , carrying a finite memory γ of past slopes. Introducing eddy memory explains the model results and brings to light an oscillation with a period ≈ 50 yr, where the eddy diffusion time scale TE ~ 10 yr and γ ≈ 6 yr are diagnosed from the eddy-resolving model. The EM mode increases the Ekman-driven gyre variance by γ/TE ≈ 50% ± 15%, a fraction that stays relatively constant despite both time scales decreasing with increased mean forcing. This study suggests that the EM mode is a general property of rotating turbulent flows and highlights the need for better observational constraints on transient eddy field characteristics.

Beschreibung: GEM acknowledges the Stanback Postdoctoral Fellowship Fund at Caltech and the Howland Postdoctoral Program Fund at WHOI. MAS was supported by NSF Grants PLR-1415489 and OCE- 1232389. AFT acknowledges support from NSF OCE- 1235488.

Beschreibung: Author Posting. © American Meteorological Society, 2018. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 48 (2018): 2209-2219, doi:10.1175/JPO-D-18-0070.1.

Beschreibung: Published observations of subinertial ocean current variability show that the vertical structure is often well described by a vertical mode that has a node of horizontal velocity at the bottom rather than the traditional node of vertical velocity. The theory of forced and free linear Rossby waves in a continuously stratified ocean with a sloping bottom and bottom friction is treated here to see if frictional effects can plausibly contribute to this phenomenon. For parameter values representative of the mesoscale, bottom dissipation by itself appears to be too weak to be an explanation, although caution is required because the present approach uses a linear model to address a nonlinear phenomenon. One novel outcome is the emergence of a short-wave, bottom-trapped, strongly damped mode that is present even with a flat bottom.

Beschreibung: Partial funding for this article is provided by the National Science Foundation Physical Oceanography section through Award OCE-1433953.

Beschreibung: 2019-03-17

Beschreibung: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Marine Geology 404 (2018): 1-14, doi:10.1016/j.margeo.2018.06.016.

Beschreibung: Recent major storms have piqued interest in understanding the responses of estuarine hydrodynamics and sediment transport to these events. To that end, flow velocity, wave characteristics, and suspended-sediment concentration (SSC) were measured for 11 months at eight locations in Chincoteague Bay, MD/VA, USA, a shallow back-barrier estuary. Daily breezes and episodic storms generated sediment-resuspending waves and modified the flow velocity at all sites, which occupied channel, shoal, and sheltered-bay environments with different bed-sediment characteristics. Despite comparable SSC during calm periods, SSC at the channel locations was considerably greater than at the shoal sites during windy periods because of relatively more erodible bed sediment in the channels. Sediment fluxes were strongly wind modulated: within the bay's main channel, depth-integrated unit-width sediment flux increased nonlinearly with increasing wind speed. When averaged over all sites, about 35% of the flux occurred during windy periods (wind speed greater than 6 m s−1), which represented just 15% of the deployment time. At channel sites, the net water and sediment fluxes were opposite to the direction of the wind forcing, while at shoal sites, the fluxes generally were aligned with the wind, implying complex channel–shoal dynamics. Yearly sediment fluxes exceed previous estimates of sediment delivery to the entirety of Chincoteague Bay. These observations illustrate the dynamic sedimentary processes occurring within microtidal back-barrier lagoons and highlight the importance of storm events in the hydrodynamics and overall sediment budgets of these systems.

Beschreibung: his study was part of the Estuarine Physical Response to Storms project (GS2-2D), supported by the Department of the Interior Hurricane Sandy Recovery program.

Beschreibung: © The Author(s), 2017. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Marine Geology 395 (2018): 301-319, doi:10.1016/j.margeo.2017.10.014.

Beschreibung: A high-resolution multibeam echosounder (MBES) dataset covering over 279,000 km2 was acquired in the southeastern Indian Ocean to assist the search for Malaysia Airlines Flight 370 (MH370) that disappeared on 8 March 2014. The data provided an essential geospatial framework for the search and is the first large-scale coverage of MBES data in this region. Here we report on geomorphic analyses of the new MBES data, including a comparison with the Global Seafloor Geomorphic Features Map (GSFM) that is based on coarser resolution satellite altimetry data, and the insights the new data provide into geological processes that have formed and are currently shaping this remote deepsea area. Our comparison between the new MBES bathymetric model and the latest global topographic/bathymetric model (SRTM15_plus) reveals that 62% of the satellite-derived data points for the study area are comparable with MBES measurements within the estimated vertical uncertainty of the SRTM15_plus model (± 100 m). However, 〉 38% of the SRTM15_plus depth estimates disagree with the MBES data by 〉 100 m, in places by up to 1900 m. The new MBES data show that abyssal plains and basins in the study area are significantly more rugged than their representation in the GSFM, with a 20% increase in the extent of hills and mountains. The new model also reveals four times more seamounts than presented in the GSFM, suggesting more of these features than previously estimated for the broader region. This is important considering the ecological significance of high-relief structures on the seabed, such as hosting high levels of biodiversity. Analyses of the new data also enabled sea knolls, fans, valleys, canyons, troughs, and holes to be identified, doubling the number of discrete features mapped. Importantly, mapping the study area using MBES data improves our understanding of the geological evolution of the region and reveals a range of modern sedimentary processes. For example, a large series of ridges extending over approximately 20% of the mapped area, in places capped by sea knolls, highlight the preserved seafloor spreading fabric and provide valuable insights into Southeast Indian Ridge seafloor spreading processes, especially volcanism. Rifting is also recorded along the Broken Ridge – Diamantina Escarpment, with rift blocks and well-bedded sedimentary bedrock outcrops discernible down to 2400 m water depth. Modern ocean floor sedimentary processes are documented by sediment mass transport features, especially along the northern margin of Broken Ridge, and in pockmarks (the finest-scale features mapped), which are numerous south of Diamantina Trench and appear to record gas and/or fluid discharge from underlying marine sediments. The new MBES data highlight the complexity of the search area and serve to demonstrate how little we know about the vast areas of the ocean that have not been mapped with MBES. The availability of high-resolution and accurate maps of the ocean floor can clearly provide new insights into the Earth's geological evolution, modern ocean floor processes, and the location of sites that are likely to have relatively high biodiversity.

Beschreibung: © The Author(s), 2017. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Ecological Modelling 368 (2018): 357-376, doi:10.1016/j.ecolmodel.2017.12.010.

Beschreibung: Despite diel and seasonal vertical migrations (DVM and SVM) of high-latitude zooplankton have been studied since the late-19th century, questions still remain about the influence of environmental seasonality on vertical migration, and the combined influence of DVM and SVM on zooplankton fitness. Toward addressing these, we developed a model for simulating DVM and SVM of high-latitude herbivorous copepods in high spatio-temporal resolution. In the model, a unique timing and amplitude of DVM and SVM and its ontogenetic trajectory were defined as a vertical strategy. Growth, survival and reproductive performances of numerous vertical strategies hardwired to copepods spawned in different times of the year were assessed by a fitness estimate, which was heuristically maximized by a Genetic Algorithm to derive the optimal vertical strategy for a given model environment. The modelled food concentration, temperature and visual predation risk had a significant influence on the observed vertical strategies. Under low visual predation risk, DVM was less pronounced, and SVM and reproduction occurred earlier in the season, where capital breeding played a significant role. Reproduction was delayed by higher visual predation risk, and copepods that spawned later in the season used the higher food concentrations and temperatures to attain higher growth, which was efficiently traded off for survival through DVM. Consequently, the timing of SVM did not change much from that predicted under lower visual predation risk, but the body and reserve sizes of overwintering stages and the importance of capital breeding diminished. Altogether, these findings emphasize the significance of DVM in environments with elevated visual predation risk and shows its contrasting influence on the phenology of reproduction and SVM, and moreover highlights the importance of conducting field and modeling work to study these migratory strategies in concert.

Beschreibung: This project was funded by VISTA (project no. 6165), a basic research program in collaboration between The Norwegian Academy of Science and Letters and Statoil. ØV received funding from the Fulbright Arctic Initiative.

Beschreibung: Author Posting. © American Meteorological Society, 2018. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Climate 30 (2018): 1297-1314, doi:10.1175/JCLI-D-17-0286.1.

Beschreibung: The variance of a jet’s position in latitude is found to be related to its average speed: when a jet becomes stronger, its variability in latitude decreases. This relationship is shown to hold for observed midlatitude jets around the world and also across a hierarchy of numerical models. North Atlantic jet variability is shown to be modulated on decadal time scales, with decades of a strong, steady jet being interspersed with decades of a weak, variable jet. These modulations are also related to variations in the basinwide occurrence of high-impact blocking events. A picture emerges of complex multidecadal jet variability in which recent decades do not appear unusual. An underlying barotropic mechanism is proposed to explain this behavior, related to the change in refractive properties of a jet as it strengthens, and the subsequent effect on the distribution of Rossby wave breaking.

Beschreibung: We would like to acknowledge funding from NERC and the Research Council of Norway project jetSTREAM under Grants NE/ L01047X/1 (IMPETUS) and 231716, respectively, for a contribution to the work presented here. EAB is supported in part by the NSF Climate and Large-Scale Dynamics Program under Grant 1545675. Y-OK was supported by the NSF Climate and Large-Scale Dynamics Program under Grant 1355339. KW was supported by the Joint UK BEIS/Defra Met Office Hadley Centre Climate Programme (GA01101). RL was supported by the Met Office and the National Centre for Atmospheric Science.

Beschreibung: 2018-07-29

Beschreibung: © The Author(s), 2017. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Marine Pollution Bulletin 126 (2018): 1-18, doi:10.1016/j.marpolbul.2017.10.034.

Beschreibung: Loud sound emitted during offshore industrial activities can impact marine mammals. Regulations typically prescribe marine mammal monitoring before and/or during these activities to implement mitigation measures that minimise potential acoustic impacts. Using seismic surveys under low visibility conditions as a case study, we review which monitoring methods are suitable and compare their relative strengths and weaknesses. Passive acoustic monitoring has been implemented as either a complementary or alternative method to visual monitoring in low visibility conditions. Other methods such as RADAR, active sonar and thermal infrared have also been tested, but are rarely recommended by regulatory bodies. The efficiency of the monitoring method(s) will depend on the animal behaviour and environmental conditions, however, using a combination of complementary systems generally improves the overall detection performance. We recommend that the performance of monitoring systems, over a range of conditions, is explored in a modelling framework for a variety of species.

Beschreibung: This work was supported by the Joint Industry Programme on E&P Sound and Marine Life - Phase III. TAM was partially supported by CEAUL (funded by FCT - Fundação para a Ciência e a Tecnologia, Portugal, through the project UID/MAT/00006/2013).

Beschreibung: Author Posting. © American Meteorological Society, 2018. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Climate 31 (2018): 4309-4327, doi:10.1175/JCLI-D-17-0407.1.

Beschreibung: Multidecadal hydroclimate variability has been expressed as “megadroughts” (dry periods more severe and prolonged than observed over the twentieth century) and corresponding “megapluvial” wet periods in many regions around the world. The risk of such events is strongly affected by modes of coupled atmosphere–ocean variability and by external impacts on climate. Accurately assessing the mechanisms for these interactions is difficult, since it requires large ensembles of millennial simulations as well as long proxy time series. Here, the Community Earth System Model (CESM) Last Millennium Ensemble is used to examine statistical associations among megaevents, coupled climate modes, and forcing from major volcanic eruptions. El Niño–Southern Oscillation (ENSO) strongly affects hydroclimate extremes: larger ENSO amplitude reduces megadrought risk and persistence in the southwestern United States, the Sahel, monsoon Asia, and Australia, with corresponding increases in Mexico and the Amazon. The Atlantic multidecadal oscillation (AMO) also alters megadrought risk, primarily in the Caribbean and the Amazon. Volcanic influences are felt primarily through enhancing AMO amplitude, as well as alterations in the structure of both ENSO and AMO teleconnections, which lead to differing manifestations of megadrought. These results indicate that characterizing hydroclimate variability requires an improved understanding of both volcanic climate impacts and variations in ENSO/AMO teleconnections.

Beschreibung: This work is supported by NSF EaSM Grants AGS-1243125 and NCAR-1243107 to The University of Arizona.

Beschreibung: 2018-11-03

Beschreibung: Author Posting. © American Meteorological Society, 2018. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Climate 31 (2018): 8627-8643, doi:10.1175/JCLI-D-18-0010.1.

Beschreibung: Drought has severe consequences for humans and their environment, yet we have a limited understanding of the drivers of drought across the full range of time scales on which it occurs. Here, the atmosphere and ocean conditions that drive this continuum of drought variability in southwestern North America (SWNA) are studied using the latest observationally based products, paleoclimate reconstructions, and state-of-the-art Earth system model simulations of the last millennium. A novel application of the self-organizing maps (SOM) methodology allows for a visualization of the continuum of climate states coinciding with thousands of droughts of varying lengths in last millennium simulations from the Community Earth System Model (CESM), the Goddard Institute for Space Studies Model E2-R (GISS E2-R), and eight other members from phase 5 of the Coupled Model Intercomparison Project (CMIP5). It is found that most droughts are associated with a cool Pacific decadal oscillation (PDO) pattern, but persistent droughts can coincide with a variety of ocean–atmosphere states, including time periods showing a warm PDO or weak ocean–atmosphere anomalies. Many CMIP5 models simulate similar SWNA teleconnection patterns, but the SOM analysis demonstrates that models simulate different continuums of ocean–atmosphere states coinciding with droughts of different lengths, suggesting fundamental differences in their drought dynamics. These findings have important implications for our understanding and simulation of the drivers of persistent drought, and for their potential predictability.

Beschreibung: The National Science Foundation EaSM2 Grant (AGS1243125) supported this work.

Beschreibung: © The Author(s), 2017. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Ocean Modelling 121 (2018): 49-75, doi:10.1016/j.ocemod.2017.11.008.

Beschreibung: Lagrangian analysis is a powerful way to analyse the output of ocean circulation models and other ocean velocity data such as from altimetry. In the Lagrangian approach, large sets of virtual particles are integrated within the three-dimensional, time-evolving velocity fields. Over several decades, a variety of tools and methods for this purpose have emerged. Here, we review the state of the art in the field of Lagrangian analysis of ocean velocity data, starting from a fundamental kinematic framework and with a focus on large-scale open ocean applications. Beyond the use of explicit velocity fields, we consider the influence of unresolved physics and dynamics on particle trajectories. We comprehensively list and discuss the tools currently available for tracking virtual particles. We then showcase some of the innovative applications of trajectory data, and conclude with some open questions and an outlook. The overall goal of this review paper is to reconcile some of the different techniques and methods in Lagrangian ocean analysis, while recognising the rich diversity of codes that have and continue to emerge, and the challenges of the coming age of petascale computing.

Beschreibung: EvS has received funding from the European Research Council (ERC) under the European Unions Horizon 2020 research and innovation programme (grant agreement No 715386). This research for PJW was supported as part of the Energy Exascale Earth System Model (E3SM) project, funded by the U.S. Department of Energy, Office of Science, Office of Biological and Environmental Research. Funding for HFD was provided by Grant No. DE-SC0012457 from the US Department of Energy. PB acknowledges support for this work from NERC grant NE/R011567/1. SFG is supported by NERC National Capability funding through the Extended Ellett Line Programme.

Beschreibung: This paper is not subject to U.S. copyright. The definitive version was published in Geomorphology 300 (2018): 189-202, doi:10.1016/j.geomorph.2017.08.004.

Beschreibung: Hurricane Sandy at Fire Island, New York presented unique challenges in the quantification of storm impacts using traditional metrics of coastal change, wherein measured changes (shoreline, dune crest, and volume change) did not fully reflect the substantial changes in sediment redistribution following the storm. We used a time series of beach profile data at Fire Island, New York to define a new contour-based morphologic change metric, the Beach Change Envelope (BCE). The BCE quantifies changes to the upper portion of the beach likely to sustain measurable impacts from storm waves and capture a variety of storm and post-storm beach states. We evaluated the ability of the BCE to characterize cycles of beach change by relating it to a conceptual beach recovery regime, and demonstrated that BCE width and BCE height from the profile time series correlate well with established stages of recovery. We also investigated additional applications of this metric to capture impacts from storms and human modification by applying it to several post-storm historical datasets in which impacts varied considerably; Nor'Ida (2009), Hurricane Irene (2011), Hurricane Sandy (2012), and a 2009 community replenishment. In each case, the BCE captured distinctive upper beach morphologic change characteristic of these different beach building and erosional events. Analysis of the beach state at multiple profile locations showed spatial trends in recovery consistent with recent morphologic island evolution, which other studies have linked with sediment availability and the geologic framework. Ultimately we demonstrate a new way of more effectively characterizing beach response and recovery cycles to evaluate change along sandy coasts.

Beschreibung: This work was supported by the 2013 Disaster Relief Appropriations Act, Department of Interior Hurricane Sandy Supplemental Project GS2-2B.

Beschreibung: Author Posting. © Author(s), 2017. This article is posted here by permission of Oxford University Press for personal use, not for redistribution. The definitive version was published in Geophysical Journal International 212 (2018): 1429–1449, doi:10.1093/gji/ggx488.

Beschreibung: We conducted detailed analyses of a global array of trenches, revealing systematic intra- and intertrench variations in plate bending characteristics. The intratrench variations of the Manila and Mariana Trenches were analysed in detail as end-member cases of the relatively young (16–36 Ma) and old (140–160 Ma) subducting plates, respectively. Meanwhile, the intertrench variability was investigated for a global array of additional trenches including the Philippine, Kuril, Japan, Izu-Bonin, Aleutian, Tonga-Kermadec, Middle America, Peru, Chile, Sumatra and Java Trenches. Results of the analysis show that the trench relief (W0) and width (X0) of all systems are controlled primarily by the faulting-reduced elastic thickness near the trench axis (Tme) and affected only slightly by the initial unfaulted thickness (TMe) of the incoming plate. The reduction in Te has caused significant deepening and narrowing of trench valleys. For the cases of relatively young or old plates, the plate age could be a dominant factor in controlling the trench bending shape, regardless the variations in axial loadings. Our calculations also show that the axial loading and stresses of old subducting plates can vary significantly along the trench axis. In contrast, the young subducting plates show much smaller values and variations in axial loading and stresses.

Beschreibung: This work was supported by Chinese Academy of Sciences Grants (Y4SL021001, QYZDY-SSW-DQC005, YZ201325 and YZ201534), National Natural Science Foundation of China Grants (91628301, U1606401, 41376063 and 41706056) and HKSAR Research Grant Council Grants (24601515, 14313816).

Beschreibung: © The Author(s), 2017. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Marine Micropaleontology 138 (2018): 12-32, doi:10.1016/j.marmicro.2017.10.005.

Beschreibung: We report systematic transmission electron microscope (TEM) observations of the cellular ultrastructure of selected, small rotalid benthic foraminifera. Nine species from different environments (intertidal mudflat, fjord, and basin) were investigated: Ammonia sp., Elphidium oceanense, Haynesina germanica, Bulimina marginata, Globobulimina sp., Nonionellina labradorica, Nonionella sp., Stainforthia fusiformis and Buliminella tenuata. All the observed specimens were fixed just after collection from their natural habitats allowing description of intact and healthy cells. Foraminiferal organelles can be divided into two broad categories: (1) organelles that are present in all eukaryotes, such as the nuclei, mitochondria, endoplasmic reticulum, Golgi apparatus, and peroxisomes; and (2) organelles observed in all foraminifera but not common in all eukaryotic cells, generally with unknown function, such as fibrillar vesicles or electron-opaque bodies. Although the organelles of the first category were observed in all the observed species, their appearance varies. For example, subcellular compartments linked to feeding and metabolism exhibited different sizes and shapes between species, likely due to differences in their diet and/or trophic mechanisms. The organelles of the second category are common in all foraminiferal species investigated and, according to the literature, are frequently present in the cytoplasm of many different species, both benthic and planktonic. This study, thus, provides a detailed overview of the major ultrastructural components in benthic foraminiferal cells from a variety of marine environments, and also highlights the need for further research to better understand the function and role of the various organelles in these fascinating organisms.

Beschreibung: This work was supported by the Swiss National Science Foundation (grant no. 200021_149333), The Investment in Science Fund at WHOI and the French national program EC2CO-LEFE (project ForChlo). TJ was funded by the “FRESCO” project, a project supported by the Region Pays de Loire and the University of Angers.

Beschreibung: © The Author(s), 2017. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Science of The Total Environment 621 (2018): 1185-1198, doi:10.1016/j.scitotenv.2017.10.109.

Beschreibung: We made an assessment of the levels of radionuclides in the ocean waters, seafloor and groundwater at Bikini and Enewetak Atolls where the US conducted nuclear weapons tests in the 1940's and 50's. This included the first estimates of submarine groundwater discharge (SGD) derived from radium isotopes that can be used here to calculate radionuclide fluxes in to the lagoon waters. While there is significant variability between sites and sample types, levels of plutonium (239,240Pu) remain several orders of magnitude higher in lagoon seawater and sediments than what is found in rest of the world's oceans. In contrast, levels of cesium-137 (137Cs) while relatively elevated in brackish groundwater are only slightly higher in the lagoon water relative to North Pacific surface waters. Of special interest was the Runit dome, a nuclear waste repository created in the 1970's within the Enewetak Atoll. Low seawater ratios of 240Pu/239Pu suggest that this area is the source of about half of the Pu in the Enewetak lagoon water column, yet radium isotopes suggest that SGD from below the dome is not a significant Pu source. SGD fluxes of Pu and Cs at Bikini were also relatively low. Thus radioactivity associated with seafloor sediments remains the largest source and long term repository for radioactive contamination. Overall, Bikini and Enewetak Atolls are an ongoing source of Pu and Cs to the North Pacific, but at annual rates that are orders of magnitude smaller than delivered via close-in fallout to the same area.

Beschreibung: Finally, none of this would have been possible without the generous financial support from the Dalio Explore Fund (WHOI #25531513) for the vessel and our post cruise analyses that together resulted in this unique and successful research program.

Beschreibung: Author Posting. © American Meteorological Society, 2017. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 47 (2017): 2999-3013, doi:10.1175/JPO-D-17-0129.1.

Beschreibung: Initial results are presented from a yearlong, high-resolution (~2 km) numerical simulation covering the east Greenland shelf and the Iceland and Irminger Seas. The model hydrography and circulation in the vicinity of Denmark Strait show good agreement with available observational datasets. This study focuses on the variability of the Denmark Strait overflow (DSO) by detecting and characterizing boluses and pulses, which are the two dominant mesoscale features in the strait. The authors estimate that the yearly mean southward volume flux of the DSO is about 30% greater in the presence of boluses and pulses. On average, boluses (pulses) are 57.1 (27.5) h long, occur every 3.2 (5.5) days, and are more frequent during the summer (winter). Boluses (pulses) increase (decrease) the overflow cross-sectional area, and temperatures around the overflow interface are colder (warmer) by about 2.6°C (1.8°C). The lateral extent of the boluses is much greater than that of the pulses. In both cases the along-strait equatorward flow of dense water is enhanced but more so for pulses. The sea surface height (SSH) rises by 4–10 cm during boluses and by up to 5 cm during pulses. The SSH anomaly contours form a bowl (dome) during boluses (pulses), and the two features cross the strait with a slightly different orientation. The cross streamflow changes direction; boluses (pulses) are associated with veering (backing) of the horizontal current. The model indicates that boluses and pulses play a major role in controlling the variability of the DSO transport into the Irminger Sea.

Beschreibung: This work was supported by the NSF Grants OCE-1433448, OCE-1633124, and OCE- 1259618 and the Institute for Data Intensive Engineering and Science (IDIES) seed grant funding.

Beschreibung: 2018-06-13

Beschreibung: Author Posting. © American Meteorological Society, 2017. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 47 (2017): 2927-2947, doi:10.1175/JPO-D-17-0083.1.

Beschreibung: Motivated by observations in Hudson shelf valley showing stronger onshore than offshore flows, this study investigates wind-driven flows in idealized shallow shelf valleys. This first part of a two-part sequence focuses on the mechanism of the asymmetrical flow response in a valley to along-shelf winds of opposite directions. Model simulations show that (i) when the wind is in the opposite direction to coastal-trapped wave (CTW) phase propagation, the shelf flow turns onshore in the valley and generates strong up-valley transport and a standing meander on the upstream side (in the sense of CTW phase propagation) of the valley, and (ii) when the wind is in the same direction as CTW phase propagation, the flow forms a symmetric onshore detour pattern over the valley with negligible down-valley transport. Comparison of the modeled upstream meanders in the first scenario with CTW characteristics confirms that the up-valley flow results from CTWs being arrested by the wind-driven shelf flow establishing lee waves. The valley bathymetry generates an initial excessive onshore pressure gradient force that drives the up-valley flow and induces CTW lee waves that sustain the up-valley flow. When the wind-driven shelf flow aligns with CTW phase propagation, the initial disturbance generated in the valley propagates away, allowing the valley flow to adjust to roughly follow isobaths. Because of the similarity in the physical setup, this mechanism of arrested CTWs generating stronger onshore than offshore flow is expected to be applicable to the flow response in slope canyons to along-isobath background flows of opposite directions.

Beschreibung: WGZ and SJL were supported by the National Science Foundation through GrantOCE1154575.WGZ is also supported by the NSF Grant OCE 1634965 and SJL by NSF Grant OCE 1558874.

Beschreibung: 2018-06-08

Beschreibung: Author Posting. © American Meteorological Society, 2019. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Climate 32(8), (2019): 2185-2205. doi:10.1175/JCLI-D-18-0538.1.

Beschreibung: Much attention has been paid to the climatic impacts of changes in the Kuroshio Extension, instead of the Kuroshio in the East China Sea (ECS). This study, however, reveals the prominent influences of the lateral shift of the Kuroshio at interannual time scale in late spring [April–June (AMJ)] on the sea surface temperature (SST) and precipitation in summer around the ECS, based on high-resolution satellite observations and ERA-Interim. A persistent offshore displacement of the Kuroshio during AMJ can result in cold SST anomalies in the northern ECS and the Japan/East Sea until late summer, which correspondingly causes anomalous cooling of the lower troposphere. Consequently, the anomalous cold SST in the northern ECS acts as a key driver to robustly enhance the precipitation from the Yangtze River delta to Kyushu in early summer (May–August) and over the central ECS in late summer (July–September). In view of the moisture budget analysis, two different physical processes modulated by the lateral shift of the Kuroshio are identified to account for the distinct responses of precipitation in early and late summer, respectively. First, the anomalous cold SST in the northern ECS induced by the Kuroshio offshore shift is likely conducive to the earlier arrival of the mei-yu–baiu front at 30°–32°N and its subsequent slower northward movement, which may prolong the local rainy season, leading to the increased rain belt in early summer. Second, the persistent cold SST anomalies in late summer strengthen the near-surface baroclinicity and the associated strong atmospheric fronts embedded in the extratropical cyclones over the central ECS, which in turn enhances the local rainfall.

Beschreibung: We appreciate three anonymous reviewers for their thoughtful and constructive comments. This work is supported by the National Key Research and Development Program of China (2016YFA0601804), the National Natural Science Foundation of China (NSFC) Projects (91858102, 41490643, 41490640, 41506009, U1606402) and the OUC–WHOI joint research program (21366).

Beschreibung: 2019-10-01

Beschreibung: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Aslan, C., Beckman, N. G., Rogers, H. S., Bronstein, J., Zurell, D., Hartig, F., Shea, K., Pejchar, L., Neubert, M., Poulsen, J., HilleRisLambers, J., Miriti, M., Loiselle, B., Effiom, E., Zambrano, J., Schupp, G., Pufal, G., Johnson, J., Bullock, J. M., Brodie, J., Bruna, E., Cantrell, R. S., Decker, R., Fricke, E., Gurski, K., Hastings, A., Kogan, O., Razafindratsima, O., Sandor, M., Schreiber, S., Snell, R., Strickland, C., & Zhou, Y. Employing plant functional groups to advance seed dispersal ecology and conservation. AoB Plants, 11(2), (2019):plz006, doi:10.1093/aobpla/plz006.

Beschreibung: Seed dispersal enables plants to reach hospitable germination sites and escape natural enemies. Understanding when and how much seed dispersal matters to plant fitness is critical for understanding plant population and community dynamics. At the same time, the complexity of factors that determine if a seed will be successfully dispersed and subsequently develop into a reproductive plant is daunting. Quantifying all factors that may influence seed dispersal effectiveness for any potential seed-vector relationship would require an unrealistically large amount of time, materials and financial resources. On the other hand, being able to make dispersal predictions is critical for predicting whether single species and entire ecosystems will be resilient to global change. Building on current frameworks, we here posit that seed dispersal ecology should adopt plant functional groups as analytical units to reduce this complexity to manageable levels. Functional groups can be used to distinguish, for their constituent species, whether it matters (i) if seeds are dispersed, (ii) into what context they are dispersed and (iii) what vectors disperse them. To avoid overgeneralization, we propose that the utility of these functional groups may be assessed by generating predictions based on the groups and then testing those predictions against species-specific data. We suggest that data collection and analysis can then be guided by robust functional group definitions. Generalizing across similar species in this way could help us to better understand the population and community dynamics of plants and tackle the complexity of seed dispersal as well as its disruption.

Beschreibung: Ideas for this manuscript initiated during the Seed Dispersal Workshop held in May 2016 at the Socio-Environmental Synthesis Center in Annapolis, MD and supported by the US National Science Foundation Grant DEB-1548194 to N.G.B. and the National Socio‐Environmental Synthesis Center under the US National Science Foundation Grant DBI‐1052875. D.Z. received funding from the Swiss National Science Foundation (SNF, grant: PZ00P3_168136/1) and from the German Science Foundation (DFG, grant: ZU 361/1- 1). Contributions by the authors C.A. led the development of the concepts, writing, and revising of the manuscript with input from N.G.B. and H.S.R. All authors contributed to the development of concepts and are listed in order of contribution and alphabetical order within each level of contribution.

Beschreibung: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Chelton, D. B., Schlax, M. G., Samelson, R. M., Farrar, J. T., Molemaker, M. J., McWilliams, J. C., & Gula, J. Prospects for future satellite estimation of small-scale variability of ocean surface velocity and vorticity. Progress in Oceanography, 173, (2019):256-350, doi:0.1016/j.pocean.2018.10.012.

Beschreibung: Recent technological developments have resulted in two techniques for estimating surface velocity with higher resolution than can be achieved from presently available nadir altimeter data: (1) Geostrophically computed estimates from high-resolution sea surface height (SSH) measured interferometrically by the wide-swath altimeter on the Surface Water and Ocean Topography (SWOT) Mission with a planned launch in 2021; and (2) Measurements of ocean surface velocity from a Doppler scatterometer mission that is in the early planning stages, referred to here as a Winds and Currents Mission (WaCM). In this study, we conduct an analysis of the effects of uncorrelated measurement errors and sampling errors on the errors of the measured and derived variables of interest (SSH and geostrophically computed velocity and vorticity for SWOT, and surface velocity and vorticity for WaCM). Our analysis includes derivations of analytical expressions for the variances and wavenumber spectra of the errors of the derived variables, which will be useful to other studies based on simulated SWOT and WaCM estimates of velocity and vorticity. We also discuss limitations of the geostrophic approximation that must be used for SWOT estimates of velocity. The errors of SWOT and WaCM estimates of velocity and vorticity at the full resolutions of the measured variables are too large for the unsmoothed estimates to be scientifically useful. It will be necessary to smooth the data to reduce the noise variance. We assess the resolution capabilities of smoothed estimates of velocity and vorticity from simulated noisy SWOT and WaCM data based on a high-resolution model of the California Current System (CCS). By our suggested minimum threshold signal-to-noise (S/N) variance ratio of 10 (a standard deviation ratio of 3.16), we conclude that the wavelength resolution capabilities of maps of velocity and vorticity constructed from WaCM data with a swath width of 1200 km are, respectively, about 60 km and 90 km in 4-day averages. For context, the radii of resolvable features are about four times smaller than these mesoscale wavelength resolutions. If the swath width can be increased to 1800 km, the wavelength resolution capabilities of 4-day average maps of surface velocity and vorticity would improve to about 45 km and 70 km, respectively. Reducing the standard deviation of the uncorrelated measurement errors from the baseline value of m s−1 to a value of 0.25 m s−1 would further improve these resolution capabilities to about 20 km and 45 km. SWOT data will allow mapping of the SSH field with far greater accuracy and space–time resolution than are presently achieved by merging the data from multiple nadir altimeter missions. However, because of its much narrower 120-km measurement swath compared with WaCM and the nature of the space–time evolution of the sampling pattern during each 21-day repeat of the SWOT orbit, maps of geostrophically computed velocity and vorticity averaged over the 14-day period that is required for SWOT to observe the full CCS model domain are contaminated by sampling errors that are too large for the estimates to be useful for any amount of smoothing considered here. Reducing the SSH measurement errors would do little to improve SWOT maps of velocity and vorticity. SWOT estimates of these variables are likely to be useful only within individual measurement swaths or with the help of dynamic interpolation from a data assimilation model. By our criterion, in-swath SWOT estimates of velocity and vorticity have wavelength resolution capabilities of about 30 km and 55 km, respectively. In comparison, in-swath estimates of velocity and vorticity from WaCM data with m s−1 have a wavelength resolution capability of about 130 km for both variables. Reducing the WaCM measurement errors to m s−1 would improve the resolution capabilities to about 50 km and 75 km for velocity and vorticity, respectively. These resolutions are somewhat coarser than the in-swath estimates from SWOT data, but the swath width is more than an order of magnitude wider for WaCM. Instantaneous maps of velocity and vorticity constructed in-swath from WaCM data will therefore be much less prone to edge effect problems in the spatially smoothed fields. Depending on the precise value of the threshold adopted for the minimum S/N ratio and on the details of the filter used to smooth the SWOT and WaCM data, the resolution capabilities summarized above may be somewhat pessimistic. On the other hand, aspects of measurement errors and sampling errors that have not been accounted for in this study will worsen the resolution capabilities presented here. Another caveat to keep in mind is that the resolution capabilities deduced here from simulations of the CCS region during summertime may differ somewhat at other times of year and in other geographical regions where the signal variances and wavenumber spectra of the variables of interest differ from the CCS model used in this study. Our analysis nonetheless provides useful guidelines for the resolutions that can be expected from SWOT and WaCM.

Beschreibung: We thank Ralph Milliff, Bo Qiu, Ernesto Rodríguez and Lee-Lueng Fu for many helpful editorial comments and suggestions that improved the manuscript. This research was funded by NASA Grants NNX13AD78G, NNX14AM72G, NNX13AE32G, NNX14AM66G, NNX16AH76G,NNX14AM71G and NNX17AH54G. The two North Atlantic Ocean simulations in this study were performed using HPC resources from GENCI-TGCC with support from Grant 2017-A0010107638 for Jonathan Gula.

Beschreibung: Author Posting. © American Meteorological Society, 2019. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 49(4), (2019): 1035-1053, doi:10.1175/JPO-D-18-0136.1.

Beschreibung: Ocean stratification and the vertical extent of the mixed layer influence the rate at which the ocean and atmosphere exchange properties. This process has direct impacts for anthropogenic heat and carbon uptake in the Southern Ocean. Submesoscale instabilities that evolve over space (1–10 km) and time (from hours to days) scales directly influence mixed layer variability and are ubiquitous in the Southern Ocean. Mixed layer eddies contribute to mixed layer restratification, while down-front winds, enhanced by strong synoptic storms, can erode stratification by a cross-frontal Ekman buoyancy flux. This study investigates the role of these submesoscale processes on the subseasonal and interannual variability of the mixed layer stratification using four years of high-resolution glider data in the Southern Ocean. An increase of stratification from winter to summer occurs due to a seasonal warming of the mixed layer. However, we observe transient decreases in stratification lasting from days to weeks, which can arrest the seasonal restratification by up to two months after surface heat flux becomes positive. This leads to interannual differences in the timing of seasonal restratification by up to 36 days. Parameterizing the Ekman buoyancy flux in a one-dimensional mixed layer model reduces the magnitude of stratification compared to when the model is run using heat and freshwater fluxes alone. Importantly, the reduced stratification occurs during the spring restratification period, thereby holding important implications for mixed layer dynamics in climate models as well as physical–biological coupling in the Southern Ocean.

Beschreibung: MdP acknowledges numerous research visits to the Department of Marine Science, University of Gothenburg, and a visit to Woods Hole Oceanographic Institution, which greatly enhanced this work. We thank SANAP and the captain and crew of the S.A. Agulhas II for their assistance in the deployment and retrieval of the gliders. We acknowledge the work of SAMERC-STS for housing, managing, and piloting the gliders. SS was supported by NRF-SANAP Grant SNA14071475720 and a Wallenberg Academy Fellowship (WAF 2015.0186). Lastly, SS thanks the numerous technical assistance, advice, and IOP hosting provided by Geoff Shilling and Craig Lee of the Applied Physics Laboratory, University of Washington.

Beschreibung: 2020-04-11

Beschreibung: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Alexander, H., Johnson, L. K., & Brown, C. T.. Keeping it light: (re)analyzing community-wide datasets without major infrastructure. Gigascience, 8(2),(2019): giy159, doi:10.1093/gigascience/giy159.

Beschreibung: DNA sequencing technology has revolutionized the field of biology, shifting biology from a data-limited to data-rich state. Central to the interpretation of sequencing data are the computational tools and approaches that convert raw data into biologically meaningful information. Both the tools and the generation of data are actively evolving, yet the practice of re-analysis of previously generated data with new tools is not commonplace. Re-analysis of existing data provides an affordable means of generating new information and will likely become more routine within biology, yet necessitates a new set of considerations for best practices and resource development. Here, we discuss several practices that we believe to be broadly applicable when re-analyzing data, especially when done by small research groups.

Beschreibung: Funding was provided by the Gordon and Betty Moore Foundation (award GBMF4551 to C.T.B.).

Beschreibung: The 2017 North Atlantic right whale (NARW) unusual mortality event and an increase in humpback whale entanglements off the U.S. West Coast have driven significant interest in ropeless trap/pot fishing. Removing the vertical buoy lines used to mark traps on the sea floor and haul them up would dramatically reduce or eliminate entanglements, the leading cause of NARW mortality, while potentially allowing fishermen to harvest in areas that would otherwise need to be closed to protect whales. At the first annual Ropeless Consortium meeting, researchers, fishing industry representatives, manufacturers, conservationists, and regulators discussed existing and developing technological replacements for the marking and retrieval functions of buoy lines. Fishermen and NGO partners shared their experience demonstrating ropeless systems and provided feedback to improve the designs. U.S. and Canadian federal regulators discussed prospects to use ropeless fishing gear in areas closed to fishing with vertical lines, as well as other options to reduce entanglements, and a Massachusetts official shared additional regulatory considerations involved in ropeless fishing in state waters. Sustainable seafood experts discussed consumer market advantages and endangered, threatened, and protected species impacts in sustainability standards and certifications. Moving forward, there is an immediate need to (1) work with industry partners to iteratively test and improve ropeless retrieval and marking systems to adapt them to the specific conditions of the relevant trap/pot fisheries, (2) create data sharing and communications protocols for ropeless gear location marking, and (3) develop regulatory procedures and enforcement capacity to allow legal ropeless gear use.

Beschreibung: This research did not receive any specific grant from funding agencies in the public, commercial, or not-for-profit sectors.

Beschreibung: 2020-06-22

Beschreibung: Author Posting. © American Meteorological Society, 2019. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 49(6), (2019): 1639-1649, doi: 10.1175/JPO-D-18-0154.1.

Beschreibung: Using a recently developed asymptotic theory of internal solitary wave propagation over a sloping bottom in a rotating ocean, some new qualitative and quantitative features of this process are analyzed for internal waves in a two-layer ocean. The interplay between different singularities—terminal damping due to radiation and disappearing quadratic nonlinearity, and reaching an “internal beach” (e.g., zero lower-layer depth)—is discussed. Examples of the adiabatic evolution of a single solitary wave over a uniformly sloping bottom under realistic conditions are considered in more detail and compared with numerical solutions of the variable-coefficient, rotation-modified Korteweg–de Vries (rKdV) equation.

Beschreibung: LAO is thankful to Yu. Stepanyants for broad discussions of mutual benefit. KRH was supported by Grant N00014-18-1-2542 from the Office of Naval Research.

Beschreibung: 2020-06-13

Beschreibung: Author Posting. © American Meteorological Society, 2019. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Bulletin of the American Meteorological Society, 100(5), (2019): 897-908, doi:10.1175/BAMS-D-19-0130.1.

Beschreibung: As states, cities, tribes, and private interests cope with climate damages and seek to increase preparedness and resilience, they will need to navigate myriad choices and options available to them. Making these choices in ways that identify pathways for climate action that support their development objectives will require constructive public dialogue, community participation, and flexible and ongoing access to science- and experience-based knowledge. In 2016, a Federal Advisory Committee (FAC) was convened to recommend how to conduct a sustained National Climate Assessment (NCA) to increase the relevance and usability of assessments for informing action. The FAC was disbanded in 2017, but members and additional experts reconvened to complete the report that is presented here. A key recommendation is establishing a new nonfederal “climate assessment consortium” to increase the role of state/local/tribal government and civil society in assessments. The expanded process would 1) focus on applied problems faced by practitioners, 2) organize sustained partnerships for collaborative learning across similar projects and case studies to identify effective tested practices, and 3) assess and improve knowledge-based methods for project implementation. Specific recommendations include evaluating climate models and data using user-defined metrics; improving benefit–cost assessment and supporting decision-making under uncertainty; and accelerating application of tools and methods such as citizen science, artificial intelligence, indicators, and geospatial analysis. The recommendations are the result of broad consultation and present an ambitious agenda for federal agencies, state/local/tribal jurisdictions, universities and the research sector, professional associations, nongovernmental and community-based organizations, and private-sector firms.

Beschreibung: This report would not have been possible without the support and participation of numerous organizations and individuals. We thank New York State Governor Andrew M. Cuomo for announcing in his 2018 State of the State agenda that the IAC would be reconvened. The New York State Energy Research and Development Authority (Contract ID 123416), Columbia University’s Earth Institute, and the American Meteorological Society provided essential financial support and much more, including sage advice and moral support from John O’Leary, Shara Mohtadi, Steve Cohen, Alex Halliday, Peter deMenocal, Keith Seitter, Paul Higgins, and Bill Hooke. We thank the attendees of a workshop, generously funded by the Kresge Foundation in November of 2017, that laid a foundation for the idea to establish a civil-society-based assessment consortium. During the course of preparing the report, IAC members consulted with individuals too numerous to list here—state, local, and tribal officials; researchers; experts in nongovernmental and community-based organizations; and professionals in engineering, architecture, public health, adaptation, and other areas. We are so grateful for their time and expertise. We thank the members and staff of the National Academy of Sciences, Engineering, and Medicine’s Committee to Advise the U.S. Global Change Research Program for providing individual comments on preliminary recommendations during several discussions in open sessions of their meetings. The following individuals provided detailed comments on an earlier version of this report, which greatly sharpened our thinking and recommendations: John Balbus, Tom Dietz, Phil Duffy, Baruch Fischhoff, Brenda Hoppe, Melissa Kenney, Linda Mearns, Claudia Nierenberg, Kathleen Segerson, Soroosh Sorooshian, Chris Weaver, and Brian Zuckerman. Mary Black provided insightful copy editing of several versions of the report. We also thank four anonymous reviewers for their effort and care in critiquing and improving the report. It is the dedication, thoughtful feedback, expertise, care, and commitment of all these people and more that not only made this report possible, but allow us all to continue to support smart and insightful actions in a changing climate. We are grateful as authors and as global citizens. Author contributions: RM, SA, KB, MB, AC, JD, PF, KJ, AJ, KK, JK, ML, JM, RP, TR, LS, JS, JW, and DZ were members of the IAC and shared in researching, discussing, drafting, and approving the report. BA, JF, AG, LJ, SJ, PK, RK, AM, RM, JN, WS, JS, PT, GY, and RZ contributed to specific sections of the report.

Beschreibung: Author Posting. © American Meteorological Society, 2019. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 49(6), (2019):1463-1483, doi: 10.1175/JPO-D-18-0213.1.

Beschreibung: A set of float trajectories, deployed at 1500- and 2500-m depths throughout the deep Gulf of Mexico from 2011 to 2015, are analyzed for mesoscale processes under the Loop Current (LC). In the eastern basin, December 2012–June 2014 had 〉40 floats per month, which was of sufficient density to allow capturing detailed flow patterns of deep eddies and topographic Rossby waves (TRWs), while two LC eddies formed and separated. A northward advance of the LC front compresses the lower water column and generates an anticyclone. For an extended LC, baroclinic instability eddies (of both signs) develop under the southward-propagating large-scale meanders of the upper-layer jet, resulting in a transfer of eddy kinetic energy (EKE) to the lower layer. The increase in lower-layer EKE occurs only over a few months during meander activity and LC eddy detachment events, a relatively short interval compared with the LC intrusion cycle. Deep EKE of these eddies is dispersed to the west and northwest through radiating TRWs, of which examples were found to the west of the LC. Because of this radiation of EKE, the lower layer of the eastern basin becomes relatively quiescent, particularly in the northeastern basin, when the LC is retracted and a LC eddy has departed. A mean west-to-east, anticyclone–cyclone dipole flow under a mean LC was directly comparable to similar results from a previous moored LC array and also showed connections to an anticlockwise boundary current in the southeastern basin.

Beschreibung: The authors were supported by the Department of the Interior, Bureau of Ocean Energy Management (BOEM), Contract M08PC20043 to Leidos, Inc., Raleigh, NC. The authors also wish to acknowledge the enthusiastic support of Dr. Alexis Lugo-Fernández, the BOEM Contracting Officer’s Technical Representative, during the study into the Deep Circulation of the Gulf of Mexico, using Lagrangian Methods. Thanks go to the captains and crews of the R/V Pelican and B/O Justo Sierra, J. Malbrough (LUMCON), J. Singer (Leidos), J. Valdes (WHOI), B. Guest (WHOI), and the CANEK group (CICESE).

Beschreibung: 2020-05-29

Beschreibung: Author Posting. © American Meteorological Society, 2017. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 48 (2018): 29-44, doi:10.1175/JPO-D-17-0016.1.

Beschreibung: The cospectrum of the horizontal and vertical turbulent velocity fluctuations, an essential tool for understanding measurements of the turbulent Reynolds shear stress, often departs in the ocean from the shape that has been established in the atmospheric surface layer. Here, we test the hypothesis that this departure is caused by advection of standard boundary layer turbulence by the random oscillatory velocities produced by surface gravity waves. The test is based on a model with two elements. The first is a representation of the spatial structure of the turbulence, guided by rapid distortion theory, and consistent with the one-dimensional cospectra that have been measured in the atmosphere. The second model element is a map of the spatial structure of the turbulence to the temporal fluctuations measured at fixed sensors, assuming advection of frozen turbulence by the velocities associated with surface waves. The model is adapted to removal of the wave velocities from the turbulent fluctuations using spatial filtering. The model is tested against previously published laboratory measurements under wave-free conditions and two new sets of measurements near the seafloor in the coastal ocean in the presence of waves. Although quantitative discrepancies exist, the model captures the dominant features of the laboratory and field measurements, suggesting that the underlying model physics are sound.

Beschreibung: This research was supported by National Science Foundation Ocean Sciences Division Award 1356060 and the U.S. Geological Survey Coastal and Marine Geology Program.

Beschreibung: Author Posting. © American Meteorological Society, 2017. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Climate 30 (2017): 9871-9895, doi:10.1175/JCLI-D-17-0009.1.

Beschreibung: Two large ensembles (LEs) of historical climate simulations are used to compare how various statistical methods estimate the sea surface temperature (SST) changes due to anthropogenic and other external forcing, and how their removal affects the internally generated Atlantic multidecadal oscillation (AMO), Pacific decadal oscillation (PDO), and the SST footprint of the Atlantic meridional overturning circulation (AMOC). Removing the forced SST signal by subtracting the global mean SST (GM) or a linear regression on it (REGR) leads to large errors in the Pacific. Multidimensional ensemble empirical mode decomposition (MEEMD) and quadratic detrending only efficiently remove the forced SST signal in one LE, and cannot separate the short-term response to volcanic eruptions from natural SST variations. Removing a linear trend works poorly. Two methods based on linear inverse modeling (LIM), one where the leading LIM mode represents the forced signal and another using an optimal perturbation filter (LIMopt), perform consistently well. However, the first two LIM modes are sometimes needed to represent the forced signal, so the more robust LIMopt is recommended. In both LEs, the natural AMO variability seems largely driven by the AMOC in the subpolar North Atlantic, but not in the subtropics and tropics, and the scatter in the AMOC–AMO correlation is large between individual ensemble members. In three observational SST reconstructions for 1900–2015, linear and quadratic detrending, MEEMD, and GM yield somewhat different AMO behavior, and REGR yields smaller PDO amplitudes. Based on LIMopt, only about 30% of the AMO variability is internally generated, as opposed to more than 90% for the PDO. The natural SST variability contribution to global warming hiatus is discussed.

Beschreibung: Support from the NOAA Climate Program Office Climate Variability and Predictability program (NA13OAR4310139), NSF EaSM2 (OCE-84298900), the European Community Horizon 2020 Framework under Grant Agreement 727852 (Blue-Action), and the ANR MORDICUS project (ANR-13-SENV-0002-02) is gratefully acknowledged.

Beschreibung: 2018-05-16

Beschreibung: Author Posting. © American Meteorological Society, 2019. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Atmospheric and Oceanic Technology 36(4), (2019): 733-744, doi:10.1175/JTECH-D-18-0050.1.

Beschreibung: Sea-Bird Scientific SBE 41CP CTDs are used on autonomous floats in the global Argo ocean observing program to measure the temperature and salinity of the upper ocean. While profiling, the sensors are subject to dynamic errors as they profile through vertical gradients. Applying dynamic corrections to the temperature and conductivity data reduces these errors and improves sensor accuracy. A series of laboratory experiments conducted in a stratified tank are used to characterize dynamic errors and determine corrections. The corrections are adapted for Argo floats, and recommendations for future implementation are presented.

Beschreibung: 2020-04-23

Beschreibung: Author Posting. © American Meteorological Society, 2019. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Weather Climate and Society 11(3), (2019):465-487, doi: 10.1175/WCAS-D-18-0134.1.

Beschreibung: As states, cities, tribes, and private interests cope with climate damages and seek to increase preparedness and resilience, they will need to navigate myriad choices and options available to them. Making these choices in ways that identify pathways for climate action that support their development objectives will require constructive public dialogue, community participation, and flexible and ongoing access to science- and experience-based knowledge. In 2016, a Federal Advisory Committee (FAC) was convened to recommend how to conduct a sustained National Climate Assessment (NCA) to increase the relevance and usability of assessments for informing action. The FAC was disbanded in 2017, but members and additional experts reconvened to complete the report that is presented here. A key recommendation is establishing a new nonfederal “climate assessment consortium” to increase the role of state/local/tribal government and civil society in assessments. The expanded process would 1) focus on applied problems faced by practitioners, 2) organize sustained partnerships for collaborative learning across similar projects and case studies to identify effective tested practices, and 3) assess and improve knowledge-based methods for project implementation. Specific recommendations include evaluating climate models and data using user-defined metrics; improving benefit–cost assessment and supporting decision-making under uncertainty; and accelerating application of tools and methods such as citizen science, artificial intelligence, indicators, and geospatial analysis. The recommendations are the result of broad consultation and present an ambitious agenda for federal agencies, state/local/tribal jurisdictions, universities and the research sector, professional associations, nongovernmental and community-based organizations, and private-sector firms.

Beschreibung: This report would not have been possible without the support and participation of numerous organizations and individuals. We thank New York State Governor Andrew M. Cuomo for announcing in his 2018 State of the State agenda that the IAC would be reconvened. The New York State Energy Research and Development Authority (Contract ID 123416), Columbia University’s Earth Institute, and the American Meteorological Society provided essential financial support and much more, including sage advice and moral support from John O’Leary, Shara Mohtadi, Steve Cohen, Alex Halliday, Peter deMenocal, Keith Seitter, Paul Higgins, and Bill Hooke. We thank the attendees of a workshop, generously funded by the Kresge Foundation in November of 2017, that laid a foundation for the idea to establish a civil-society-based assessment consortium. During the course of preparing the report, IAC members consulted with individuals too numerous to list here—state, local, and tribal officials; researchers; experts in nongovernmental and community-based organizations; and professionals in engineering, architecture, public health, adaptation, and other areas. We are so grateful for their time and expertise. We thank the members and staff of the National Academy of Sciences, Engineering, and Medicine’s Committee to Advise the U.S. Global Change Research Program for providing individual comments on preliminary recommendations during several discussions in open sessions of their meetings. The following individuals provided detailed comments on an earlier version of this report, which greatly sharpened our thinking and recommendations: John Balbus, Tom Dietz, Phil Duffy, Baruch Fischhoff, Brenda Hoppe, Melissa Kenney, Linda Mearns, Claudia Nierenberg, Kathleen Segerson, Soroosh Sorooshian, Chris Weaver, and Brian Zuckerman. Mary Black provided insightful copy editing of several versions of the report. We also thank four anonymous reviewers for their effort and care in critiquing and improving the report. It is the dedication, thoughtful feedback, expertise, care, and commitment of all these people and more that not only made this report possible, but allow us all to continue to support smart and insightful actions in a changing climate. We are grateful as authors and as global citizens. Author contributions: RM, SA, KB, MB, AC, JD, PF, KJ, AJ, KK, JK, ML, JM, RP, TR, LS, JS, JW, and DZ were members of the IAC and shared in researching, discussing, drafting, and approving the report. BA, JF, AG, LJ, SJ, PK, RK, AM, RM, JN, WS, JS, PT, GY, and RZ contributed to specific sections of the report.

Beschreibung: 2020-05-21

Beschreibung: Author Posting. © American Meteorological Society, 2019. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 49(6), (2019):1619-1637, doi:10.1175/JPO-D-18-0175.1.

Beschreibung: Although the hydrodynamics of river meanders are well studied, the influence of curvature on flow in estuaries, with alternating tidal flow and varying water levels and salinity gradients, is less well understood. This paper describes a field study on curvature effects in a narrow salt-marsh creek with sharp bends. The key observations, obtained during times of negligible stratification, are 1) distinct differences between secondary flow during ebb and flood, with helical circulation as in rivers during ebb and a reversed circulation during flood, and 2) maximum (ebb and flood) streamwise velocities near the inside of the bend, unlike typical river bend flow. The streamwise velocity structure is explained by the lack of a distinct point bar and the relatively deep cross section in the estuary, which means that curvature-induced inward momentum redistribution is not overcome by outward redistribution by frictional and topographic effects. Through differential advection of the along-estuary salinity gradient, the laterally sheared streamwise velocity generates lateral salinity differences, with the saltiest water near the inside during flood. The resulting lateral baroclinic pressure gradient force enhances the standard helical circulation during ebb but counteracts it during flood. This first leads to a reversed secondary circulation during flood in the outer part of the cross section, which triggers a positive feedback mechanism by bringing slower-moving water from the outside inward along the surface. This leads to a reversal of the vertical shear in the streamwise flow, and therefore in the centrifugal force, which further enhances the reversed secondary circulation.

Beschreibung: This project was funded by NSF Grant OCE-1634490. During this work W.M. Kranenburg was supported as USGS Postdoctoral Scholar at Woods Hole Oceanographic Institution. A.M.P. Garcia was supported by the Michael J. Kowalski Fellowship in Ocean Science and Engineering (AMPG), and the Diversity Fellowship of the MIT Office of the Dean of Graduate Education (AMPG). The authors thank Jay Sisson for the technical support and Peter Traykovski for providing the bathymetric data. Also, the suggestions for improvement by Dr. K. Blanckaert and an anonymous reviewer are thankfully acknowledged.

Beschreibung: Author Posting. © American Meteorological Society, 2019. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Bulletin of the American Meteorological Society 100(5), (2019): 909-912, doi: 10.1175/BAMS-D-18-0319.1.

Beschreibung: The open availability and wide accessibility of digital scientific resources, such as articles and datasets, is becoming the norm for twenty-first-century science. Geoscience researchers are now being asked by funding agencies and scientific publishers to archive and cite data to support open access but often struggle to understand, interpret, and fulfill these requirements. To fulfill the promise of new open data initiatives, 1) scientific resources (e.g., data and software) must be collected and documented properly; 2) repository services, including preservation and storage capabilities, must be maintained, supported, and improved over time; and 3) governance institutions must be established. These issues were discussed in the Geoscience Digital Data Resource and Repository Service (GeoDaRRS) workshop,1 held in August 2018, at NCAR. The workshop brought together more than 60 geoscience researchers, technology experts, scientific publishers, funders, and data repository personnel to discuss data management challenges and opportunities within the geosciences. This included exploring whether new services are needed to complement existing data facilities, particularly in the areas of 1) data management planning support resources and 2) repository services for geoscience researchers who have data that do not fit in any existing repository. More details on the workshop agenda and recommendations are available in the final workshop report (Mayernik et al. 2018).

Beschreibung: The National Science Foundation (NSF) provided the funding support for this workshop. We also thank Cecilia Banner and Elizabeth Faircloth of NCAR for administrative and logistical support.

Beschreibung: 2020-06-04

Beschreibung: Author Posting. © American Meteorological Society, 2019. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 49(6), (2019): 1561-1575, doi:10.1175/JPO-D-19-0002.1.

Beschreibung: Within the pycnocline, where diapycnal mixing is suppressed, both the vertical movement (uplift) of isopycnal surfaces and upward motion along sloping isopycnals supply nutrients to the euphotic layer, but the relative importance of each of these mechanisms is unknown. We present a method for decomposing vertical velocity w into two components in a Lagrangian frame: vertical velocity along sloping isopycnal surfaces and the adiabatic vertical velocity of isopycnal surfaces . We show that , where is the isopycnal slope and is the geometric aspect ratio of the flow, and that accounts for 10%–25% of the total vertical velocity w for isopycnal slopes representative of the midlatitude pycnocline. We perform the decomposition of w in a process study model of a midlatitude eddying flow field generated with a range of isopycnal slopes. A spectral decomposition of the velocity components shows that while is the largest contributor to vertical velocity, is of comparable magnitude at horizontal scales less than about 10 km, that is, at submesoscales. Increasing the horizontal grid resolution of models is known to increase vertical velocity; this increase is disproportionately due to better resolution of , as is shown here by comparing 1- and 4-km resolution model runs. Along-isopycnal vertical transport can be an important contributor to the vertical flux of tracers, including oxygen, nutrients, and chlorophyll, although we find weak covariance between vertical velocity and nutrient anomaly in our model.

Beschreibung: MAF was supported by a National Defense Science and Engineering Graduate Fellowship and AM by NSF OCE-I434788. The authors thank Glenn Flierl and Ruth Curry for helpful conversations, and three anonymous reviewers for comments that improved the manuscript.

Beschreibung: 2020-06-11

Beschreibung: Author Posting. © The Authors, 2019. This article is posted here by permission of The Royal Astronomical Society for personal use, not for redistribution. The definitive version was published in Geophysical Journal International 218(3), (2019): 2165-2178, doi: 10.1093/gji/ggz280.

Beschreibung: A multitaper estimator is proposed that accommodates time-series containing gaps without using any form of interpolation. In contrast with prior missing-data multitaper estimators that force standard Slepian sequences to be zero at gaps, the proposed missing-data Slepian sequences are defined only where data are present. The missing-data Slepian sequences are frequency independent, as are the eigenvalues that define the energy concentration within the resolution bandwidth, when the process bandwidth is [−1/2,1/2) for unit sampling and the sampling scheme comprises integer multiples of unity. As a consequence, one need only compute the ensuing missing-data Slepian sequences for a given sampling scheme once, and then the spectrum at an arbitrary set of frequencies can be computed using them. It is also shown that the resulting missing-data multitaper estimator can incorporate all of the optimality features (i.e. adaptive-weighting, F-test and reshaping) of the standard multitaper estimator, and can be applied to bivariate or multivariate situations in similar ways. Performance of the missing-data multitaper estimator is illustrated using length of day, seafloor pressure and Nile River low stand time-series.

Beschreibung: The length of day utilized in Section 3 are available from http://hpiers.obspm.fr. The pressure data used in Section 4 are available from https://doi.org/10.1029/2018JC014586. A Matlab function MDmwps.m to compute missing-data power spectra is available from the Mathworks file exchange website. The author thanks Jeff Park and editor F.J. Simons for thorough reviews. This work was supported by an Internal Research and Development award at WHOI, and by the Walter A. and Hope Noyes Smith Chair for Excellence in Oceanography.

Beschreibung: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Johnson, L. K., Alexander, H., & Brown, C. T. Re-assembly, quality evaluation, and annotation of 678 microbial eukaryotic reference transcriptomes. Gigascience, 8(4), (2019): giy158, doi: 10.1093/gigascience/giy158.

Beschreibung: Background: De novo transcriptome assemblies are required prior to analyzing RNA sequencing data from a species without an existing reference genome or transcriptome. Despite the prevalence of transcriptomic studies, the effects of using different workflows, or “pipelines,” on the resulting assemblies are poorly understood. Here, a pipeline was programmatically automated and used to assemble and annotate raw transcriptomic short-read data collected as part of the Marine Microbial Eukaryotic Transcriptome Sequencing Project. The resulting transcriptome assemblies were evaluated and compared against assemblies that were previously generated with a different pipeline developed by the National Center for Genome Research. Results: New transcriptome assemblies contained the majority of previous contigs as well as new content. On average, 7.8% of the annotated contigs in the new assemblies were novel gene names not found in the previous assemblies. Taxonomic trends were observed in the assembly metrics. Assemblies from the Dinoflagellata showed a higher number of contigs and unique k-mers than transcriptomes from other phyla, while assemblies from Ciliophora had a lower percentage of open reading frames compared to other phyla. Conclusions: Given current bioinformatics approaches, there is no single “best” reference transcriptome for a particular set of raw data. As the optimum transcriptome is a moving target, improving (or not) with new tools and approaches, automated and programmable pipelines are invaluable for managing the computationally intensive tasks required for re-processing large sets of samples with revised pipelines and ensuring a common evaluation workflow is applied to all samples. Thus, re-assembling existing data with new tools using automated and programmable pipelines may yield more accurate identification of taxon-specific trends across samples in addition to novel and useful products for the community.

Beschreibung: Funding was provided by the Gordon and Betty Moore Foundation under award number GBMF4551 to C.T.B. Jetstream cloud platform was used with XSEDE allocation TG-BIO160028 [66, 67].

Beschreibung: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Donatelli, C., Ganju, N. K., Kalra, T. S., Fagherazzi, S., & Leonardi, N. (2019). Dataset of numerical modelling results of wave thrust on salt marsh boundaries with different seagrass coverages in a shallow back-barrier estuary. Data in Brief, 25, 104197, doi:10.1016/j.dib.2019.104197.

Beschreibung: This article contains data on the effects of seagrass decline on wave energy along the shoreline of Barnegat Bay (USA) previously evaluated in Donatelli et al., 2019. This study was carried out applying the Coupled-Ocean-Atmosphere-Wave-Sediment Transport (COAWST) numerical modelling framework to six historical maps of seagrass distribution. A new routine recently implemented in COAWST was used, which explicitly computes the wave thrust acting on salt marsh boundaries. The numerical modelling results are reported in terms of wind-wave heights for different seagrass coverages, wind speeds and directions. From a comparison with a numerical experiment without submerged aquatic vegetation, we show how the computed wave thrust on marsh boundaries can be reduced by seagrass beds.

Beschreibung: This study was supported by the Department of the Interior Hurricane Sandy Recovery program (ID G16AC00455, sub-award to University of Liverpool). S.F. was partly supported by NSF awards 1637630 (PIE LTER) and 1832221 (VCR LTER). We further acknowledge partial support from the Environmental Change Research group at University of Liverpool, and University of Liverpool library for publication fees.

Beschreibung: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Hult, M., Charette, M., Lutter, G., Marissens, G., Henderson, P., Sobiech-Matura, K., & Simgen, H. Underground gamma-ray measurements of radium isotopes from hydrothermal plumes in the deep Pacific Ocean. Applied Radiation and Isotopes, 153, (2019): 108831, doi:10.1016/j.apradiso.2019.108831.

Beschreibung: The radium isotopes 226Ra and 228Ra can provide important data on the dynamics of deep-sea hydrothermal plumes that travel the oceans for decades and have great impact on the ocean chemistry. This study focuses on parameters important for obtaining low detection limits for 228Ra using gamma-ray spectrometry. It is present at mBq-levels in samples collected during the US GEOTRACES 2013 cruise to the Southeast Pacific Ocean.

Beschreibung: The work of the HADES-staff of Euridice at SCK•CEN is gratefully acknowledged. We are most grateful to Dr. Faidra Tzika for her work in the precursor to this project. Many thanks to Heiko Stroh for quality control and measurements in HADES. This research was supported in part by grants from the U.S. National Science Foundation, Ocean Sciences division (OCE-1232669 and OCE-1736277).