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  • Articles  (308)
  • Mutation  (162)
  • Temperature  (81)
  • Research Support as Topic  (75)
  • 2000-2004  (308)
  • 1980-1984
  • 1975-1979
  • 2002  (308)
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  • Articles  (308)
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  • 2000-2004  (308)
  • 1980-1984
  • 1975-1979
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  • 1
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-10-05
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Enserink, Martin -- New York, N.Y. -- Science. 2002 Oct 4;298(5591):92-3.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12364779" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; *Animals, Genetically Modified ; *Anopheles/genetics/parasitology/physiology ; Behavior, Animal ; Biological Evolution ; *Culicidae/genetics/parasitology/physiology ; Ecology ; Genetics, Population ; Genome ; Humans ; *Insect Vectors/genetics/parasitology/physiology ; Malaria/prevention & control/transmission ; Molecular Biology ; Mosquito Control ; Plasmodium/physiology ; *Research ; Research Support as Topic ; Sequence Analysis, DNA ; Sexual Behavior, Animal
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 2
    Publication Date: 2002-04-06
    Description: Higher order chromatin structure presents a barrier to the recognition and repair of DNA damage. Double-strand breaks (DSBs) induce histone H2AX phosphorylation, which is associated with the recruitment of repair factors to damaged DNA. To help clarify the physiological role of H2AX, we targeted H2AX in mice. Although H2AX is not essential for irradiation-induced cell-cycle checkpoints, H2AX-/- mice were radiation sensitive, growth retarded, and immune deficient, and mutant males were infertile. These pleiotropic phenotypes were associated with chromosomal instability, repair defects, and impaired recruitment of Nbs1, 53bp1, and Brca1, but not Rad51, to irradiation-induced foci. Thus, H2AX is critical for facilitating the assembly of specific DNA-repair complexes on damaged DNA.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4721576/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4721576/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Celeste, Arkady -- Petersen, Simone -- Romanienko, Peter J -- Fernandez-Capetillo, Oscar -- Chen, Hua Tang -- Sedelnikova, Olga A -- Reina-San-Martin, Bernardo -- Coppola, Vincenzo -- Meffre, Eric -- Difilippantonio, Michael J -- Redon, Christophe -- Pilch, Duane R -- Olaru, Alexandru -- Eckhaus, Michael -- Camerini-Otero, R Daniel -- Tessarollo, Lino -- Livak, Ferenc -- Manova, Katia -- Bonner, William M -- Nussenzweig, Michel C -- Nussenzweig, Andre -- Z99 CA999999/Intramural NIH HHS/ -- New York, N.Y. -- Science. 2002 May 3;296(5569):922-7. Epub 2002 Apr 4.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Experimental Immunology Branch, National Cancer Institute, NIH, Bethesda, MD 20892, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11934988" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Animals ; B-Lymphocytes/immunology/physiology ; Base Sequence ; Cell Aging ; Cell Cycle ; Cells, Cultured ; *Chromosome Aberrations ; DNA Damage ; *DNA Repair ; Female ; Gene Targeting ; Histones/chemistry/*genetics/*physiology ; Immunoglobulin Class Switching ; Infertility, Male/genetics/physiopathology ; Lymphocyte Count ; Male ; Meiosis ; Mice ; Mice, Knockout ; Molecular Sequence Data ; Mutation ; Phosphorylation ; *Recombination, Genetic ; Spermatocytes/physiology ; T-Lymphocytes/immunology/physiology
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    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 3
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-08-10
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Lynch, Michael -- New York, N.Y. -- Science. 2002 Aug 9;297(5583):945-7.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biology, Indiana University, Bloomington, IN 47405, USA. mlynch@bio.indiana.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12169715" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; *Biological Evolution ; Caenorhabditis elegans/genetics ; Chromosomes/genetics ; Chromosomes, Human/genetics ; *Gene Duplication ; Gene Rearrangement ; Gene Silencing ; *Genes, Duplicate ; *Genome, Human ; Genomics ; Humans ; Mutation ; Selection, Genetic
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  • 4
    Publication Date: 2002-06-22
    Description: Positive-strand RNA viruses such as poliovirus replicate their genomes on intracellular membranes of their eukaryotic hosts. Electron microscopy has revealed that purified poliovirus RNA-dependent RNA polymerase forms planar and tubular oligomeric arrays. The structural integrity of these arrays correlates with cooperative RNA binding and RNA elongation and is sensitive to mutations that disrupt intermolecular contacts predicted by the polymerase structure. Membranous vesicles isolated from poliovirus-infected cells contain structures consistent with the presence of two-dimensional polymerase arrays on their surfaces during infection. Therefore, host cytoplasmic membranes may function as physical foundations for two-dimensional polymerase arrays, conferring the advantages of surface catalysis to viral RNA replication.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Lyle, John M -- Bullitt, Esther -- Bienz, Kurt -- Kirkegaard, Karla -- AI-42119/AI/NIAID NIH HHS/ -- New York, N.Y. -- Science. 2002 Jun 21;296(5576):2218-22.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA 94305, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12077417" target="_blank"〉PubMed〈/a〉
    Keywords: Base Sequence ; Binding Sites ; Catalysis ; Crystallography, X-Ray ; HeLa Cells ; Humans ; Hydrogen-Ion Concentration ; Inclusion Bodies, Viral/metabolism/ultrastructure ; Microscopy, Electron ; Models, Molecular ; Molecular Sequence Data ; Mutation ; Nucleic Acid Conformation ; Poliovirus/*enzymology/physiology ; Protein Conformation ; Protein Structure, Quaternary ; Protein Structure, Tertiary ; RNA Replicase/*chemistry/isolation & purification/*metabolism/ultrastructure ; RNA, Viral/biosynthesis/*metabolism ; Viral Core Proteins/metabolism ; Virus Replication
    Print ISSN: 0036-8075
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    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 5
    Publication Date: 2002-11-16
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Kerr, Richard A -- New York, N.Y. -- Science. 2002 Nov 15;298(5597):1320-2.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12434031" target="_blank"〉PubMed〈/a〉
    Keywords: Humans ; *Planets ; Research Personnel ; Research Support as Topic ; Solar System ; Space Flight/*economics/*organization & administration/trends ; Spacecraft ; United States ; United States National Aeronautics and Space ; Administration/*economics/*organization & administration/trends
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    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 6
    Publication Date: 2002-11-02
    Description: The interaction of climate and the timing of low tides along the West Coast of the United States creates a complex mosaic of thermal environments, in which northern sites can be more thermally stressful than southern sites. Thus, climate change may not lead to a poleward shift in the distribution of intertidal organisms, as has been proposed, but instead will likely cause localized extinctions at a series of "hot spots." Patterns of exposure to extreme climatic conditions are temporally variable, and tidal predictions suggest that in the next 3 to 5 years "hot spots" are likely to appear at several northern sites.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Helmuth, Brian -- Harley, Christopher D G -- Halpin, Patricia M -- O'Donnell, Michael -- Hofmann, Gretchen E -- Blanchette, Carol A -- New York, N.Y. -- Science. 2002 Nov 1;298(5595):1015-7.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉University of South Carolina, Department of Biological Sciences and Marine Sciences Program, Columbia, SC 29208, USA. helmuth@biol.sc.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12411702" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Bivalvia/*physiology ; *Body Temperature ; *Climate ; *Ecosystem ; Environment ; Geography ; Pacific Ocean ; Pacific States ; Seasons ; *Seawater ; Temperature ; *Water Movements
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  • 7
    Publication Date: 2002-05-04
    Description: There is a relation between stress and alcohol drinking. We show that the corticotropin-releasing hormone (CRH) system that mediates endocrine and behavioral responses to stress plays a role in the control of long-term alcohol drinking. In mice lacking a functional CRH1 receptor, stress leads to enhanced and progressively increasing alcohol intake. The effect of repeated stress on alcohol drinking behavior appeared with a delay and persisted throughout life. It was associated with an up-regulation of the N-methyl-d-aspartate receptor subunit NR2B. Alterations in the CRH1 receptor gene and adaptional changes in NR2B subunits may constitute a genetic risk factor for stress-induced alcohol drinking and alcoholism.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Sillaber, Inge -- Rammes, Gerhard -- Zimmermann, Stephan -- Mahal, Beatrice -- Zieglgansberger, Walter -- Wurst, Wolfgang -- Holsboer, Florian -- Spanagel, Rainer -- New York, N.Y. -- Science. 2002 May 3;296(5569):931-3.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Max Planck Institute of Psychiatry, Kraepelinstrasse 2-10, 80804 Munich, Germany. sillaber@mpipsykl.mpg.de〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11988580" target="_blank"〉PubMed〈/a〉
    Keywords: Action Potentials ; *Alcohol Drinking ; Alcoholism/*etiology/genetics ; Animals ; Brain/metabolism ; Corticotropin-Releasing Hormone/physiology ; Ethanol/blood ; Female ; Hippocampus/physiology ; In Vitro Techniques ; Male ; Mice ; Mice, Knockout ; Models, Animal ; Mutation ; Receptors, AMPA/metabolism ; Receptors, Corticotropin-Releasing Hormone/*genetics/*physiology ; Receptors, Kainic Acid/metabolism ; Receptors, N-Methyl-D-Aspartate/*metabolism ; Signal Transduction ; Stress, Physiological/physiopathology ; Stress, Psychological/*physiopathology ; Up-Regulation
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    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 8
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-04-06
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Winograd, Isaac J -- New York, N.Y. -- Science. 2002 Apr 5;296(5565):7 discussion 7.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉U.S. Geological Survey, 432 National Center, 12201 Sunrise Valley Drive, Reston, VA 20192, USA. ijwinogr@usgs.gov〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11934990" target="_blank"〉PubMed〈/a〉
    Keywords: California ; *Climate ; Geologic Sediments ; Ice ; Nevada ; Oceans and Seas ; Oxygen Isotopes ; Seawater ; Temperature ; Time
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  • 9
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-05-23
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Marshall, Eliot -- New York, N.Y. -- Science. 2002 May 17;296(5571):1218.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12016281" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Arabidopsis/anatomy & histology/*genetics/growth & development/*physiology ; Arabidopsis Proteins/genetics/*physiology ; Biological Evolution ; Drosophila/anatomy & histology/genetics/growth & development/physiology ; Drosophila Proteins/genetics/physiology ; Genes, Insect ; Genes, Plant ; HSP90 Heat-Shock Proteins/genetics/*physiology ; Mutation ; Plant Leaves/anatomy & histology
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  • 10
    Publication Date: 2002-02-09
    Description: Double-stranded RNA-mediated gene interference (RNAi) in Caenorhabditis elegans systemically inhibits gene expression throughout the organism. To investigate how gene-specific silencing information is transmitted between cells, we constructed a strain that permits visualization of systemic RNAi. We used this strain to identify systemic RNA interference-deficient (sid) loci required to spread gene-silencing information between tissues but not to initiate or maintain an RNAi response. One of these loci, sid-1, encodes a conserved protein with predicted transmembrane domains. SID-1 is expressed in cells sensitive to RNAi, is localized to the cell periphery, and is required cell-autonomously for systemic RNAi.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Winston, William M -- Molodowitch, Christina -- Hunter, Craig P -- New York, N.Y. -- Science. 2002 Mar 29;295(5564):2456-9. Epub 2002 Feb 7.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Molecular and Cellular Biology, Harvard University, 16 Divinity Avenue, Cambridge, MA 02138, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11834782" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Animals ; Animals, Genetically Modified ; Caenorhabditis elegans/embryology/*genetics/metabolism ; Caenorhabditis elegans Proteins/chemistry/*genetics/*physiology ; Calmodulin-Binding Proteins/genetics ; Cytoplasm/metabolism ; Embryo, Nonmammalian/physiology ; *Gene Silencing ; Genes, Helminth ; Germ Cells/metabolism ; Green Fluorescent Proteins ; Intestines/metabolism ; Luminescent Proteins/genetics ; Membrane Proteins/chemistry/*genetics/*physiology ; Molecular Sequence Data ; Mosaicism ; Muscle Proteins/genetics ; Muscles/metabolism ; Mutation ; Protein Structure, Tertiary ; RNA, Double-Stranded/*genetics/metabolism ; RNA, Helminth/*genetics/metabolism ; Recombinant Fusion Proteins/metabolism ; Transgenes
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  • 11
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-11-26
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Malakoff, David -- New York, N.Y. -- Science. 2002 Nov 22;298(5598):1534.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12446877" target="_blank"〉PubMed〈/a〉
    Keywords: *Bioterrorism ; Financing, Government ; Government Agencies/economics/legislation & jurisprudence/*organization & ; administration ; National Institutes of Health (U.S.) ; Research/*organization & administration ; Research Support as Topic ; Security Measures/economics/legislation & jurisprudence/*organization & ; administration ; United States
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  • 12
    Publication Date: 2002-12-10
    Description: The formation and patterning of mesoderm during mammalian gastrulation require the activity of Nodal, a secreted mesoderm-inducing factor of the transforming growth factor-beta (TGF-beta) family. Here we show that the transcriptional corepressor DRAP1 has a very specific role in regulation of Nodal activity during mouse embryogenesis. We find that loss of Drap1 leads to severe gastrulation defects that are consistent with increased expression of Nodal and can be partially suppressed by Nodal heterozygosity. Biochemical studies indicate that DRAP1 interacts with and inhibits DNA binding by the winged-helix transcription factor FoxH1 (FAST), a critical component of a positive feedback loop for Nodal activity. We propose that DRAP1 limits the spread of a morphogenetic signal by down-modulating the response to the Nodal autoregulatory loop.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Iratni, Rabah -- Yan, Yu-Ting -- Chen, Canhe -- Ding, Jixiang -- Zhang, Yi -- Price, Sandy M -- Reinberg, Danny -- Shen, Michael M -- New York, N.Y. -- Science. 2002 Dec 6;298(5600):1996-9.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Howard Hughes Medical Institute and Department of Biochemistry, Division of Nucleic Acids Enzymology, University of Medicine and Dentistry of New Jersey-Robert Wood Johnson Medical School, Piscataway, NJ 08854, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12471260" target="_blank"〉PubMed〈/a〉
    Keywords: Alleles ; Animals ; Cell Line ; Crosses, Genetic ; DNA/metabolism ; DNA-Binding Proteins/metabolism ; *Embryonic and Fetal Development ; Female ; Forkhead Transcription Factors ; Gastrula/*physiology ; Gene Expression Regulation, Developmental ; Gene Targeting ; Heterozygote ; In Situ Hybridization ; Left-Right Determination Factors ; Male ; Mesoderm/cytology/physiology ; Mice ; Morphogenesis ; Mutation ; Nodal Protein ; Phenotype ; Protein Binding ; RNA Interference ; Recombinant Fusion Proteins/metabolism ; Repressor Proteins/genetics/*metabolism ; Reverse Transcriptase Polymerase Chain Reaction ; *Signal Transduction ; Transcription Factors/metabolism ; Transforming Growth Factor beta/genetics/*metabolism
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  • 13
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-04-20
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Coombs, Rod -- Georghiou, Luke -- New York, N.Y. -- Science. 2002 Apr 19;296(5567):471.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Manchester School of Management, University of Manchester Institute of Science and Technology (UMIST), and the Center for Research on Innovation and Competition, Manchester University and UMIST, Manchester M60 1QD, UK. rod.coombs@umist.ac.uk〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11964461" target="_blank"〉PubMed〈/a〉
    Keywords: *Industry ; International Cooperation ; *Research ; Research Support as Topic ; *Technology ; Universities
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  • 14
    Publication Date: 2002-04-27
    Description: Little is known of how plant disease resistance (R) proteins recognize pathogens and activate plant defenses. Rcr3 is specifically required for the function of Cf-2, a Lycopersicon pimpinellifolium gene bred into cultivated tomato (Lycopersicon esculentum) for resistance to Cladosporium fulvum. Rcr3 encodes a secreted papain-like cysteine endoprotease. Genetic analysis shows Rcr3 is allelic to the L. pimpinellifolium Ne gene, which suppresses the Cf-2-dependent autonecrosis conditioned by its L. esculentum allele, ne (necrosis). Rcr3 alleles from these two species encode proteins that differ by only seven amino acids. Possible roles of Rcr3 in Cf-2-dependent defense and autonecrosis are discussed.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Kruger, Julia -- Thomas, Colwyn M -- Golstein, Catherine -- Dixon, Mark S -- Smoker, Matthew -- Tang, Saijun -- Mulder, Lonneke -- Jones, Jonathan D G -- New York, N.Y. -- Science. 2002 Apr 26;296(5568):744-7.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉The Sainsbury Laboratory, John Innes Centre, Norwich NR4 7UH, UK.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11976458" target="_blank"〉PubMed〈/a〉
    Keywords: Alleles ; Amino Acid Sequence ; Base Sequence ; Cladosporium/*physiology ; Cloning, Molecular ; Cysteine Endopeptidases/chemistry/*genetics/*metabolism ; Cysteine Proteinase Inhibitors/pharmacology ; Gene Expression Regulation, Plant ; *Genes, Plant ; Immunity, Innate ; Leucine/analogs & derivatives/pharmacology ; Lycopersicon esculentum/*enzymology/genetics/*microbiology/physiology ; Molecular Sequence Data ; Mutation ; Phenotype ; *Plant Diseases ; Plant Leaves/enzymology ; Plant Proteins/*metabolism ; Plants, Genetically Modified ; Promoter Regions, Genetic ; Recombinant Fusion Proteins/chemistry/metabolism ; Tobacco/genetics ; Transgenes
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  • 15
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-12-03
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Gallo, Robert C -- Montagnier, Luc -- New York, N.Y. -- Science. 2002 Nov 29;298(5599):1730-1.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Institute of Human Virology and Department of Microbiology and Immunology, University of Maryland, Baltimore, MD 21201, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12459577" target="_blank"〉PubMed〈/a〉
    Keywords: AIDS Vaccines/immunology/therapeutic use ; *Acquired Immunodeficiency Syndrome/drug therapy/prevention & ; control/transmission/virology ; Anti-HIV Agents/therapeutic use ; Biomedical Research ; Clinical Trials as Topic ; Developed Countries ; Developing Countries ; Drug Costs ; Female ; HIV/drug effects ; Health Services/economics ; Humans ; Infant, Newborn ; Infectious Disease Transmission, Vertical ; International Cooperation ; Pregnancy ; Pregnancy Complications, Infectious/drug therapy ; Research Support as Topic ; Technology Transfer ; United Nations
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  • 16
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-12-03
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Garelik, Glenn -- New York, N.Y. -- Science. 2002 Nov 29;298(5599):1702-4.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12459565" target="_blank"〉PubMed〈/a〉
    Keywords: Cloning, Molecular ; DNA/genetics ; Developed Countries ; Developing Countries ; Drug Resistance, Microbial ; Fungicides, Industrial ; Genes ; Genes, Plant ; Genetic Engineering ; Genome ; Mutation ; *Phytophthora/genetics/pathogenicity/physiology ; *Plant Diseases ; Sequence Analysis, DNA ; Solanum tuberosum/genetics/*microbiology ; Spores/physiology ; Virulence/genetics
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  • 17
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-12-03
    Description: The gastric pathogen Helicobacter pylori is known to be able to use molecular hydrogen as a respiratory substrate when grown in the laboratory. We found that hydrogen is available in the gastric mucosa of mice and that its use greatly increased the stomach colonization by H. pylori. Hydrogenase activity in H. pylori is constitutive but increased fivefold upon incubation with hydrogen. Hydrogen concentrations measured in the stomachs of live mice were found to be 10 to 50 times as high as the H. pylori affinity for hydrogen. A hydrogenase mutant strain is much less efficient in its colonization of mice. Therefore, hydrogen present in animals as a consequence of normal colonic flora is an energy-yielding substrate that can facilitate the maintenance of a pathogenic bacterium.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Olson, Jonathan W -- Maier, Robert J -- New York, N.Y. -- Science. 2002 Nov 29;298(5599):1788-90.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Microbiology, University of Georgia, Athens, GA 30602, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12459589" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Catechol 2,3-Dioxygenase ; Colon/metabolism/microbiology ; *Dioxygenases ; Energy Metabolism ; Fermentation ; Gastric Mucosa/*metabolism/*microbiology ; Gene Expression Regulation, Bacterial ; Genes, Reporter ; Helicobacter pylori/growth & development/*metabolism ; Hydrogen/*metabolism ; Hydrogenase/genetics/*metabolism ; Kinetics ; Mice ; Mutation ; Oxidation-Reduction ; Oxygenases/genetics/metabolism ; Transcription, Genetic
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  • 18
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-01-05
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Huete-Perez, J A -- Orozco, D A -- New York, N.Y. -- Science. 2001 Dec 14;294(5550):2289-90.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11764811" target="_blank"〉PubMed〈/a〉
    Keywords: *Biotechnology/economics ; *Developing Countries ; Financing, Government ; Industry ; International Cooperation ; Research Support as Topic ; Technology Transfer ; Universities
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  • 19
    Publication Date: 2002-09-14
    Description: Mutations in the BRCA2 (breast cancer susceptibility gene 2) tumor suppressor lead to chromosomal instability due to defects in the repair of double-strand DNA breaks (DSBs) by homologous recombination, but BRCA2's role in this process has been unclear. Here, we present the 3.1 angstrom crystal structure of a approximately 90-kilodalton BRCA2 domain bound to DSS1, which reveals three oligonucleotide-binding (OB) folds and a helix-turn-helix (HTH) motif. We also (i) demonstrate that this BRCA2 domain binds single-stranded DNA, (ii) present its 3.5 angstrom structure bound to oligo(dT)9, (iii) provide data that implicate the HTH motif in dsDNA binding, and (iv) show that BRCA2 stimulates RAD51-mediated recombination in vitro. These findings establish that BRCA2 functions directly in homologous recombination and provide a structural and biochemical basis for understanding the loss of recombination-mediated DSB repair in BRCA2-associated cancers.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Yang, Haijuan -- Jeffrey, Philip D -- Miller, Julie -- Kinnucan, Elspeth -- Sun, Yutong -- Thoma, Nicolas H -- Zheng, Ning -- Chen, Phang-Lang -- Lee, Wen-Hwa -- Pavletich, Nikola P -- New York, N.Y. -- Science. 2002 Sep 13;297(5588):1837-48.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Pharmacology, Sloan-Kettering Division, Joan and Sanford I. Weill Graduate School of Medical Sciences, Cornell University, New York, NY 10021, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12228710" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Animals ; BRCA2 Protein/*chemistry/genetics/*metabolism ; Binding Sites ; Crystallography, X-Ray ; DNA/metabolism ; *DNA Repair ; DNA, Single-Stranded/*metabolism ; DNA-Binding Proteins/metabolism ; Genes, BRCA2 ; Helix-Turn-Helix Motifs ; Humans ; Hydrogen Bonding ; Hydrophobic and Hydrophilic Interactions ; Mice ; Molecular Sequence Data ; Mutation ; Proteasome Endopeptidase Complex ; Protein Conformation ; Protein Folding ; Protein Structure, Secondary ; Protein Structure, Tertiary ; Proteins/chemistry/*metabolism ; Rad51 Recombinase ; Rats ; *Recombination, Genetic
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  • 20
    Publication Date: 2002-12-21
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Yimin, Ding -- Mervis, Jeffrey -- New York, N.Y. -- Science. 2002 Dec 20;298(5602):2317-9.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12493892" target="_blank"〉PubMed〈/a〉
    Keywords: Agriculture ; Biotechnology ; China ; Commerce ; Crops, Agricultural/*genetics ; Financing, Government ; *Food, Genetically Modified ; International Cooperation ; Investments ; *Plants, Genetically Modified ; Research ; Research Support as Topic
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  • 21
    Publication Date: 2002-01-05
    Description: The isoprenylated benzoquinone coenzyme Q is a redox-active lipid essential for electron transport in aerobic respiration. Here, we show that withdrawal of coenzyme Q (Q) from the diet of wild-type nematodes extends adult life-span by approximately 60%. The longevity of clk-1, daf-2, daf-12, and daf-16 mutants is also extended by a Q-less diet. These results establish the importance of Q in life-span determination. The findings suggest that Q and the daf-2 pathway intersect at the mitochondria and imply that a concerted production coupled with enhanced scavenging of reactive oxygen species contributes to the substantial life-span extension.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Larsen, Pamela L -- Clarke, Catherine F -- New York, N.Y. -- Science. 2002 Jan 4;295(5552):120-3.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Chemistry and Biochemistry, 607 Charles E. Young Drive East, Box 951569, University of California, Los Angeles, CA 90095, USA. larsen@chem.ucla.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11778046" target="_blank"〉PubMed〈/a〉
    Keywords: *Aging ; Animals ; Caenorhabditis elegans/genetics/growth & development/metabolism/*physiology ; Caenorhabditis elegans Proteins/genetics/metabolism ; Diet ; Escherichia coli/genetics/metabolism ; Fermentation ; Forkhead Transcription Factors ; Genes, Helminth ; Helminth Proteins/genetics/metabolism ; Larva/growth & development/metabolism ; *Longevity ; Mitochondria/metabolism ; Models, Biological ; Mutation ; Oxidation-Reduction ; Oxygen Consumption ; Phenotype ; Reactive Oxygen Species/metabolism ; Receptor, Insulin/genetics/metabolism ; Receptors, Cytoplasmic and Nuclear/genetics/metabolism ; Signal Transduction ; Transcription Factors/genetics/metabolism ; Ubiquinone/administration & dosage/*metabolism
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  • 22
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-12-25
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Schnaitman, Carl A -- New York, N.Y. -- Science. 2002 Dec 20;298(5602):2329.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12498169" target="_blank"〉PubMed〈/a〉
    Keywords: Bacteria/virology ; Bacteriophage P1/genetics/*physiology ; Bacteriophages/genetics/*physiology ; Biomedical Research ; Lipopolysaccharides/metabolism ; Receptors, Virus/genetics/physiology ; Research Support as Topic
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  • 23
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-04-16
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Schrag, Daniel P -- Linsley, Braddock K -- New York, N.Y. -- Science. 2002 Apr 12;296(5566):277-8.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Laboratory for Geochemical Oceanography, Department of Earth and Planetary Sciences, Harvard University, Cambridge, MA 02138, USA. schrag@eps.harvard.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11951026" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Calcium/analysis ; Calcium Carbonate/*chemistry ; Chemical Precipitation ; Climate ; Cnidaria/*chemistry/growth & development/physiology ; Eukaryota/*physiology ; Oceans and Seas ; Photosynthesis ; Seasons ; *Seawater ; Strontium/analysis ; *Symbiosis ; Temperature ; Time ; *Tropical Climate
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  • 24
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-11-16
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Lawler, Andrew -- New York, N.Y. -- Science. 2002 Nov 15;298(5597):1315-6.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12434026" target="_blank"〉PubMed〈/a〉
    Keywords: Materials Testing ; Physical Phenomena ; *Physics ; Research Support as Topic ; Space Flight/*organization & administration ; *Spacecraft ; United States ; United States National Aeronautics and Space Administration/*organization & ; administration ; *Weightlessness
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  • 25
    Publication Date: 2002-05-11
    Description: Aneuploidy (trisomy or monosomy) is the leading genetic cause of pregnancy loss in humans and results from errors in meiotic chromosome segregation. Here, we show that the absence of synaptonemal complex protein 3 (SCP3) promotes aneuploidy in murine oocytes by inducing defective meiotic chromosome segregation. The abnormal oocyte karyotype is inherited by embryos, which die in utero at an early stage of development. In addition, embryo death in SCP3-deficient females increases with advancing maternal age. We found that SCP3 is required for chiasmata formation and for the structural integrity of meiotic chromosomes, suggesting that altered chromosomal structure triggers nondisjunction. SCP3 is thus linked to inherited aneuploidy in female germ cells and provides a model system for studying age-dependent degeneration in oocytes.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Yuan, Li -- Liu, Jian-Guo -- Hoja, Mary-Rose -- Wilbertz, Johannes -- Nordqvist, Katarina -- Hoog, Christer -- New York, N.Y. -- Science. 2002 May 10;296(5570):1115-8.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Center for Genomics and Bioinformatics and Department of Cell and Molecular Biology, Karolinska Institutet, SE-171 77 Stockholm, Sweden.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12004129" target="_blank"〉PubMed〈/a〉
    Keywords: *Aneuploidy ; Animals ; Chromosome Segregation ; Chromosomes/*physiology/ultrastructure ; Crossing Over, Genetic ; *Embryo Loss ; Female ; Karyotyping ; Litter Size ; Male ; Maternal Age ; *Meiosis ; Mice ; Mice, Inbred C57BL ; Mutation ; Nondisjunction, Genetic ; Nuclear Proteins/genetics/*physiology ; Oocytes/*physiology ; Pregnancy ; Recombination, Genetic ; Synaptonemal Complex/physiology/ultrastructure
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  • 26
    Publication Date: 2002-11-26
    Description: The untranslated roX1 and roX2 RNAs are components of the Drosophila male-specific lethal (MSL) complex, which modifies histones to up-regulate transcription of the male X chromosome. roX genes are normally located on the X chromosome, and roX transgenes can misdirect the dosage compensation machinery to spread locally on other chromosomes. Here we define MSL protein abundance as a determinant of whether the MSL complex will spread in cis from an autosomal roX transgene. The number of expressed roX genes in a nucleus was inversely correlated with spreading from roX transgenes. We suggest a model in which MSL proteins assemble into active complexes by binding nascent roX transcripts. When MSL protein/roX RNA ratios are high, assembly will be efficient, and complexes may be completed while still tethered to the DNA template. We propose that this local production of MSL complexes determines the extent of spreading into flanking chromatin.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Park, Yongkyu -- Kelley, Richard L -- Oh, Hyangyee -- Kuroda, Mitzi I -- Meller, Victoria H -- GM45744/GM/NIGMS NIH HHS/ -- GM58427/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 2002 Nov 22;298(5598):1620-3.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Howard Hughes Medical Institute, Baylor College of Medicine, One Baylor Plaza, Houston, TX 77030, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12446910" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Chromatin/*metabolism ; Chromosomes/metabolism ; DNA, Complementary ; DNA-Binding Proteins ; *Dosage Compensation, Genetic ; Drosophila/*genetics/metabolism ; *Drosophila Proteins ; Gene Expression Regulation ; Mutation ; Nuclear Proteins/genetics/*metabolism ; RNA, Messenger/*genetics/metabolism ; RNA, Untranslated/*genetics/metabolism ; Transcription Factors/genetics/*metabolism ; Transcription, Genetic ; Transgenes ; X Chromosome/metabolism
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  • 27
    Publication Date: 2002-06-29
    Description: Despite the importance of selection against deleterious mutations in natural populations, reliable estimates of the genomic numbers of mutant alleles in wild populations are scarce. We found that, in wild-caught bluefin killifish Lucania goodei (Fundulidae) and wild-caught zebrafish Danio rerio (Cyprinidae), the average numbers of recessive lethal alleles per individual are 1.9 (95% confidence limits 1.3 to 2.6) and 1.4 (95% confidence limits 1.0 to 2.0), respectively. These results, together with data on several Drosophila species and on Xenopus laevis, show that phylogenetically distant animals with different genome sizes and numbers of genes carry similar numbers of lethal mutations.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉McCune, Amy R -- Fuller, Rebecca C -- Aquilina, Allisan A -- Dawley, Robert M -- Fadool, James M -- Houle, David -- Travis, Joseph -- Kondrashov, Alexey S -- New York, N.Y. -- Science. 2002 Jun 28;296(5577):2398-401.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, NY 14853, USA. arm2@cornell.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12089444" target="_blank"〉PubMed〈/a〉
    Keywords: Alleles ; Animals ; Crosses, Genetic ; Drosophila/genetics ; Female ; Fundulidae/abnormalities/*genetics ; *Genes, Lethal ; *Genes, Recessive ; *Genome ; Likelihood Functions ; Male ; Mutation ; Phenotype ; Xenopus laevis/genetics ; Zebrafish/abnormalities/*genetics
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  • 28
    Publication Date: 2002-06-08
    Description: The inferred crystallographic class of circumstellar silicon carbide based on astronomical infrared spectra is controversial. We have directly determined the polytype distribution of circumstellar SiC from transmission electron microscopy of presolar silicon carbide from the Murchison carbonaceous meteorite. Only two polytypes (of a possible several hundred) were observed: cubic 3C and hexagonal 2H silicon carbide and their intergrowths. We conclude that this structural simplicity is a direct consequence of the low pressures in circumstellar outflows and the corresponding low silicon carbide condensation temperatures.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Daulton, T L -- Bernatowicz, T J -- Lewis, R S -- Messenger, S -- Stadermann, F J -- Amari, S -- New York, N.Y. -- Science. 2002 Jun 7;296(5574):1852-5.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Materials Science Division, Argonne National Laboratory, Argonne IL, 60439-4838, USA. tdaulton@nrlssc.navy.mil〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12052956" target="_blank"〉PubMed〈/a〉
    Keywords: Astronomical Phenomena ; *Astronomy ; Carbon Compounds, Inorganic/*analysis ; *Meteoroids ; Microscopy, Electron ; Pressure ; Silicon Compounds/*analysis ; Temperature
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  • 29
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-02-16
    Description: The corepressor CtBP (carboxyl-terminal binding protein) is involved in transcriptional pathways important for development, cell cycle regulation, and transformation. We demonstrate that CtBP binding to cellular and viral transcriptional repressors is regulated by the nicotinamide adenine dinucleotides NAD+ and NADH, with NADH being two to three orders of magnitude more effective. Levels of free nuclear nicotinamide adenine dinucleotides, determined using two-photon microscopy, correspond to the levels required for half-maximal CtBP binding and are considerably lower than those previously reported. Agents capable of increasing NADH levels stimulate CtBP binding to its partners in vivo and potentiate CtBP-mediated repression. We propose that this ability to detect changes in nuclear NAD+/NADH ratio allows CtBP to serve as a redox sensor for transcription.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Zhang, Qinghong -- Piston, David W -- Goodman, Richard H -- K01 CA096561/CA/NCI NIH HHS/ -- R01 CA115468/CA/NCI NIH HHS/ -- R01 CA115468-05/CA/NCI NIH HHS/ -- New York, N.Y. -- Science. 2002 Mar 8;295(5561):1895-7. Epub 2002 Feb 14.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Vollum Institute, Oregon Health Sciences University, 3181 SW Sam Jackson Park Road, Portland, OR 97201, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11847309" target="_blank"〉PubMed〈/a〉
    Keywords: Adenovirus E1A Proteins/metabolism ; Alcohol Oxidoreductases ; Amino Acid Sequence ; Animals ; Binding Sites ; Cadherins/genetics ; Cell Nucleus/*metabolism ; Cytoplasm/metabolism ; DNA-Binding Proteins/chemistry/genetics/*metabolism ; *Gene Expression Regulation ; HeLa Cells ; Homeodomain Proteins/metabolism ; Humans ; Microscopy, Fluorescence ; Molecular Sequence Data ; Mutation ; NAD/*metabolism ; Oxidation-Reduction ; Phosphoproteins/chemistry/genetics/*metabolism ; Promoter Regions, Genetic ; Protein Binding ; Recombinant Fusion Proteins/metabolism ; Repressor Proteins/*metabolism ; *Transcription Factors ; Transcription, Genetic ; Transfection
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  • 30
    Publication Date: 2002-05-23
    Description: Mechanical and thermal cues stimulate a specialized group of sensory neurons that terminate in the skin. Three members of the transient receptor potential (TRP) family of channels are expressed in subsets of these neurons and are activated at distinct physiological temperatures. Here, we describe the cloning and characterization of a novel thermosensitive TRP channel. TRPV3 has a unique threshold: It is activated at innocuous (warm) temperatures and shows an increased response at noxious temperatures. TRPV3 is specifically expressed in keratinocytes; hence, skin cells are capable of detecting heat via molecules similar to those in heat-sensing neurons.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Peier, Andrea M -- Reeve, Alison J -- Andersson, David A -- Moqrich, Aziz -- Earley, Taryn J -- Hergarden, Anne C -- Story, Gina M -- Colley, Sian -- Hogenesch, John B -- McIntyre, Peter -- Bevan, Stuart -- Patapoutian, Ardem -- New York, N.Y. -- Science. 2002 Jun 14;296(5575):2046-9. Epub 2002 May 16.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Genomics Institute of the Novartis Research Foundation, San Diego, CA 92121, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12016205" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Animals ; Animals, Newborn ; Blotting, Northern ; CHO Cells ; Capsaicin/*analogs & derivatives/pharmacology ; *Cation Transport Proteins ; Cell Line ; Cells, Cultured ; Cloning, Molecular ; Cricetinae ; Epidermis/cytology/innervation/metabolism ; Ganglia, Spinal/metabolism ; *Hot Temperature ; Humans ; In Situ Hybridization ; Ion Channels/chemistry/genetics/*metabolism ; Keratinocytes/*metabolism ; Membrane Potentials ; Mice ; Molecular Sequence Data ; Nerve Endings/physiology ; Neurons/physiology ; Patch-Clamp Techniques ; RNA, Messenger/genetics/metabolism ; Ruthenium Red/pharmacology ; Signal Transduction ; Spinal Cord/metabolism ; TRPV Cation Channels ; Temperature
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  • 31
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-06-08
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Bostanci, Adam -- New York, N.Y. -- Science. 2002 Jun 7;296(5574):1778.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12052923" target="_blank"〉PubMed〈/a〉
    Keywords: Disclosure ; *Ethics, Professional ; Germany ; Guidelines as Topic ; Research/*standards ; Research Support as Topic ; *Scientific Misconduct ; Universities/economics/*standards
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  • 32
    Publication Date: 2002-11-09
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Joint, Ian -- Tait, Karen -- Callow, Maureen E -- Callow, James A -- Milton, Debra -- Williams, Paul -- Camara, Miguel -- New York, N.Y. -- Science. 2002 Nov 8;298(5596):1207.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Plymouth Marine Laboratory, Prospect Place, Plymouth, PL1 3DH, UK. I.Joint@pml.ac.uk〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12424372" target="_blank"〉PubMed〈/a〉
    Keywords: 4-Butyrolactone/*analogs & derivatives/*metabolism ; Bacterial Proteins/genetics/metabolism ; *Biofilms ; Cell Adhesion ; Cell Communication ; Chemotaxis ; Chlorophyta/*physiology ; Escherichia coli/genetics/metabolism/*physiology ; Hydrogen-Ion Concentration ; Mutation ; Spores/physiology ; *Transcription Factors ; Vibrio/genetics/metabolism/*physiology
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  • 33
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-05-25
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉McMichael, Andrew -- Klenerman, Paul -- New York, N.Y. -- Science. 2002 May 24;296(5572):1410-1.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Weatherall Institute of Molecular Medicine, Oxford OX3 9DS, UK. andrew.mcmichael@clinical-medicine.oxford.ac.uk〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12029119" target="_blank"〉PubMed〈/a〉
    Keywords: Alleles ; Animals ; Epitopes/genetics/immunology ; Epitopes, T-Lymphocyte/genetics/immunology ; Gene Products, pol/immunology ; Genes, MHC Class I ; HIV Antigens/genetics/*immunology ; HIV Core Protein p24/genetics/immunology ; HIV Infections/*immunology/virology ; HIV-1/genetics/*immunology/physiology ; HLA Antigens/genetics/*immunology ; HLA-B Antigens/immunology ; HLA-B27 Antigen/immunology ; Histocompatibility Antigens Class I/genetics/*immunology ; Humans ; Immunodominant Epitopes/genetics/immunology ; Macaca ; Mutation ; Simian Acquired Immunodeficiency Syndrome/immunology ; Simian Immunodeficiency Virus/genetics/immunology ; T-Lymphocytes, Cytotoxic/*immunology
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-05-11
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Bostanci, Adam -- New York, N.Y. -- Science. 2002 May 10;296(5570):1000-1.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12004093" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Atlantic Ocean ; *Decapodiformes/physiology ; Falkland Islands ; *Fisheries ; Forecasting ; Models, Biological ; Seawater ; Temperature ; Water Movements
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  • 35
    Publication Date: 2002-04-20
    Description: The 19S proteasome regulatory particle plays a critical role in cellular proteolysis. However, recent reports have demonstrated that 19S proteins play a nonproteolytic role in nucleotide excision repair and transcription elongation. We show by chromatin immunoprecipitation assays that proteins comprising the 19S complex are recruited to the GAL1-10 promoter by the Gal4 transactivator upon induction with galactose. This recruited complex does not contain proteins from the 20S proteolytic particle and includes a subset of the 19S proteins. This subset is also specifically retained from an extract by the Gal4 activation domain. These data indicate that in vivo, the base of the 19S complex functions independently of the larger complex and plays a direct, nonproteolytic role in RNA polymerase II transcription.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Gonzalez, Fernando -- Delahodde, Agnes -- Kodadek, Thomas -- Johnston, Stephen Albert -- New York, N.Y. -- Science. 2002 Apr 19;296(5567):548-50.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Center for Biomedical Inventions, University of Texas-Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, TX 75390-8573, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11964484" target="_blank"〉PubMed〈/a〉
    Keywords: Adenosine Triphosphatases/genetics/*metabolism ; Cysteine Endopeptidases/metabolism ; DNA, Fungal/genetics/metabolism ; DNA-Binding Proteins ; Endopeptidases/*metabolism ; Fungal Proteins/genetics/metabolism ; Galactose/metabolism ; Gene Expression Regulation, Fungal ; Multienzyme Complexes/metabolism ; Mutation ; Precipitin Tests ; *Promoter Regions, Genetic ; Proteasome Endopeptidase Complex ; Recombinant Fusion Proteins/metabolism ; Repressor Proteins/genetics/metabolism ; *Saccharomyces cerevisiae Proteins ; Transcription Factors/genetics/metabolism ; *Transcription, Genetic ; Ubiquitin/metabolism ; Yeasts/enzymology/*genetics
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  • 36
    Publication Date: 2002-01-19
    Description: Organs are specialized tissues used for enhanced physiology and environmental adaptation. The cells of the embryo are genetically programmed to establish organ form and function through conserved developmental modules. The zebrafish is a powerful model system that is poised to contribute to our basic understanding of vertebrate organogenesis. This review develops the theme of modules and illustrates how zebrafish have been particularly useful for understanding heart and blood formation.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Thisse, Christine -- Zon, Leonard I -- DK49216/DK/NIDDK NIH HHS/ -- R01-HL-48801/HL/NHLBI NIH HHS/ -- New York, N.Y. -- Science. 2002 Jan 18;295(5554):457-62.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Institut de Biologie Moleculaire et Cellulaire, CNRS, INSERM, Universite Louis Pasteur, 1 rue Laurent Fries, BP 163, 67404 Illkirch Cedex, C. U. de Strasbourg, France.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11799232" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Blood Vessels/*embryology ; Body Patterning ; Cell Differentiation/genetics ; Cell Lineage ; *Gene Expression Regulation, Developmental ; Heart/*embryology/physiology ; *Hematopoiesis/genetics ; Humans ; Morphogenesis/genetics ; Mutation ; Stem Cells/physiology ; Zebrafish/*embryology/*genetics/metabolism
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  • 37
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-01-26
    Description: The pack ice of Earth's polar oceans appears to be frozen white desert, devoid of life. However, beneath the snow lies a unique habitat for a group of bacteria and microscopic plants and animals that are encased in an ice matrix at low temperatures and light levels, with the only liquid being pockets of concentrated brines. Survival in these conditions requires a complex suite of physiological and metabolic adaptations, but sea-ice organisms thrive in the ice, and their prolific growth ensures they play a fundamental role in polar ecosystems. Apart from their ecological importance, the bacterial and algae species found in sea ice have become the focus for novel biotechnology, as well as being considered proxies for possible life forms on ice-covered extraterrestrial bodies.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Thomas, D N -- Dieckmann, G S -- New York, N.Y. -- Science. 2002 Jan 25;295(5555):641-4.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉School of Ocean Sciences, University of Wales-Bangor, Menai Bridge, Anglesey, UK, LL59 5EY. d.thomas@bangor.ac.uk〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11809961" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Antarctic Regions ; *Bacterial Physiological Phenomena ; Biotechnology ; *Ecosystem ; Environment ; Eukaryota/*physiology ; Exobiology ; Freezing ; *Ice ; Light ; *Seawater/microbiology ; Sodium Chloride ; Temperature ; Ultraviolet Rays
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-06-08
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Dayton, Leigh -- New York, N.Y. -- Science. 2002 Jun 7;296(5574):1779-81.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12052925" target="_blank"〉PubMed〈/a〉
    Keywords: Academies and Institutes/economics ; Australia ; Bioethical Issues ; *Biotechnology/economics ; Cell Culture Techniques ; *Cell Line ; Embryo, Mammalian/*cytology ; Financing, Government ; Humans ; *Research/legislation & jurisprudence ; Research Support as Topic ; *Stem Cells ; Universities/economics
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  • 39
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-04-27
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Dayton, Leigh -- New York, N.Y. -- Science. 2002 Apr 26;296(5568):641.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11976422" target="_blank"〉PubMed〈/a〉
    Keywords: Authorship ; Humans ; Kidney Transplantation ; New South Wales ; Publishing/standards ; Research/*standards ; Research Support as Topic ; *Scientific Misconduct ; Universities
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  • 40
    Publication Date: 2002-09-21
    Description: Persons with the autosomal recessive disorder Bloom syndrome are predisposed to cancers of many types due to loss-of-function mutations in the BLM gene, which encodes a recQ-like helicase. Here we show that mice heterozygous for a targeted null mutation of Blm, the murine homolog of BLM, develop lymphoma earlier than wild-type littermates in response to challenge with murine leukemia virus and develop twice the number of intestinal tumors when crossed with mice carrying a mutation in the Apc tumor suppressor. These observations indicate that Blm is a modifier of tumor formation in the mouse and that Blm haploinsufficiency is associated with tumor predisposition, a finding with important implications for cancer risk in humans.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Goss, Kathleen Heppner -- Risinger, Mary A -- Kordich, Jennifer J -- Sanz, Maureen M -- Straughen, Joel E -- Slovek, Lisa E -- Capobianco, Anthony J -- German, James -- Boivin, Gregory P -- Groden, Joanna -- CA63507/CA/NCI NIH HHS/ -- CA84291/CA/NCI NIH HHS/ -- CA88460/CA/NCI NIH HHS/ -- ES06096/ES/NIEHS NIH HHS/ -- New York, N.Y. -- Science. 2002 Sep 20;297(5589):2051-3.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Department of Molecular Genetics, University of Cincinnati College of Medicine, 231 Albert Sabin Way, Cincinnati, OH 45267, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12242442" target="_blank"〉PubMed〈/a〉
    Keywords: Adenoma/genetics/pathology ; Adenosine Triphosphatases/*genetics ; Alleles ; Animals ; Bloom Syndrome/*genetics ; Cells, Cultured ; Crosses, Genetic ; DNA Helicases/*genetics ; Female ; Gene Targeting ; Genes, APC ; *Genetic Predisposition to Disease ; *Heterozygote ; Humans ; Intestinal Neoplasms/*genetics/pathology ; Leukemia Virus, Murine ; Loss of Heterozygosity ; Lymphoma, T-Cell/*genetics/virology ; Male ; Mice ; Mice, Inbred C57BL ; Mutation ; RecQ Helicases ; Sister Chromatid Exchange
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  • 41
    Publication Date: 2002-06-29
    Description: Size homeostasis in budding yeast requires that cells grow to a critical size before commitment to division in the late prereplicative growth phase of the cell cycle, an event termed Start. We determined cell size distributions for the complete set of approximately 6000 Saccharomyces cerevisiae gene deletion strains and identified approximately 500 abnormally small (whi) or large (lge) mutants. Genetic analysis revealed a complex network of newly found factors that govern critical cell size at Start, the most potent of which were Sfp1, Sch9, Cdh1, Prs3, and Whi5. Ribosome biogenesis is intimately linked to cell size through Sfp1, a transcription factor that controls the expression of at least 60 genes implicated in ribosome assembly. Cell growth and division appear to be coupled by multiple conserved mechanisms.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Jorgensen, Paul -- Nishikawa, Joy L -- Breitkreutz, Bobby-Joe -- Tyers, Mike -- New York, N.Y. -- Science. 2002 Jul 19;297(5580):395-400. Epub 2002 Jun 27.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Medical Genetics and Microbiology, University of Toronto, Toronto, Ontario, Canada M5S 1A8.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12089449" target="_blank"〉PubMed〈/a〉
    Keywords: Cdh1 Proteins ; Cell Cycle ; *Cell Division ; Cell Nucleolus/metabolism ; Crosses, Genetic ; DNA-Binding Proteins/genetics/*physiology ; Epistasis, Genetic ; Gene Deletion ; Gene Expression Regulation, Fungal ; Genes, Essential ; *Genes, Fungal ; Mutation ; Oligonucleotide Array Sequence Analysis ; Oxygen Consumption ; Phenotype ; Protein Kinases/genetics/physiology ; Ribosomes/*metabolism ; Saccharomyces cerevisiae/*cytology/genetics/growth & ; development/*physiology/ultrastructure ; Saccharomyces cerevisiae Proteins/biosynthesis/genetics/*physiology
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  • 42
    Publication Date: 2002-04-16
    Description: One of the factors postulated to drive the aging process is the accumulation of DNA damage. Here, we provide strong support for this hypothesis by describing studies of mice with a mutation in XPD, a gene encoding a DNA helicase that functions in both repair and transcription and that is mutated in the human disorder trichothiodystrophy (TTD). TTD mice were found to exhibit many symptoms of premature aging, including osteoporosis and kyphosis, osteosclerosis, early greying, cachexia, infertility, and reduced life-span. TTD mice carrying an additional mutation in XPA, which enhances the DNA repair defect, showed a greatly accelerated aging phenotype, which correlated with an increased cellular sensitivity to oxidative DNA damage. We hypothesize that aging in TTD mice is caused by unrepaired DNA damage that compromises transcription, leading to functional inactivation of critical genes and enhanced apoptosis.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉de Boer, Jan -- Andressoo, Jaan Olle -- de Wit, Jan -- Huijmans, Jan -- Beems, Rudolph B -- van Steeg, Harry -- Weeda, Geert -- van der Horst, Gijsbertus T J -- van Leeuwen, Wibeke -- Themmen, Axel P N -- Meradji, Morteza -- Hoeijmakers, Jan H J -- AG 17242-02/AG/NIA NIH HHS/ -- New York, N.Y. -- Science. 2002 May 17;296(5571):1276-9. Epub 2002 Apr 11.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Medical Genetics Center, Department of Cell Biology and Genetics, Center for Biomedical Genetics, Erasmus University, 3000 DR Rotterdam, Netherlands.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11950998" target="_blank"〉PubMed〈/a〉
    Keywords: *Aging ; Aging, Premature/*etiology ; Animals ; Apoptosis ; Bone Density ; Cachexia/etiology ; Crosses, Genetic ; *DNA Damage ; DNA Helicases/genetics/*physiology ; *DNA Repair ; DNA-Binding Proteins/genetics/physiology ; Female ; Fertility ; Gene Targeting ; Growth Disorders/etiology/genetics ; Hair Diseases/genetics ; Kyphosis/etiology/genetics/pathology ; Male ; Mice ; Mutation ; Oxidative Stress ; Phenotype ; Point Mutation ; Proteins/genetics/*physiology ; RNA-Binding Proteins/genetics/physiology ; *Transcription Factors ; Transcription, Genetic ; Xeroderma Pigmentosum Group A Protein ; Xeroderma Pigmentosum Group D Protein
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  • 43
    Publication Date: 2002-01-26
    Description: Posttranscriptional gene silencing in Caenorhabditis elegans results from exposure to double-stranded RNA (dsRNA), a phenomenon designated as RNA interference (RNAi), or from co-suppression, in which transgenic DNA leads to silencing of both the transgene and the endogenous gene. Here we show that single-stranded RNA oligomers of antisense polarity can also be potent inducers of gene silencing. As is the case for co-suppression, antisense RNAs act independently of the RNAi genes rde-1 and rde-4 but require the mutator/RNAi gene mut-7 and a putative DEAD box RNA helicase, mut-14. Our data favor the hypothesis that gene silencing is accomplished by RNA primer extension using the mRNA as template, leading to dsRNA that is subsequently degraded.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Tijsterman, Marcel -- Ketting, Rene F -- Okihara, Kristy L -- Sijen, Titia -- Plasterk, Ronald H A -- New York, N.Y. -- Science. 2002 Jan 25;295(5555):694-7.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Hubrecht Laboratory, Center for Biomedical Genetics, Uppsalalaan 8, 3584 CT, Utrecht, Netherlands.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11809977" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Motifs ; Animals ; Caenorhabditis elegans/embryology/enzymology/*genetics ; Caenorhabditis elegans Proteins/chemistry/genetics/*metabolism ; Carrier Proteins/genetics/metabolism ; DEAD-box RNA Helicases/chemistry/genetics/*metabolism ; *Gene Silencing ; *Genes, Helminth ; Genes, Reporter ; Green Fluorescent Proteins ; Luminescent Proteins/genetics/metabolism ; Mutation ; Oligoribonucleotides/genetics ; RNA Helicases/chemistry/genetics/*metabolism ; RNA, Antisense/*genetics ; RNA, Double-Stranded/genetics ; RNA, Helminth/genetics/metabolism ; RNA, Messenger/genetics/metabolism
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  • 44
    Publication Date: 2002-10-26
    Description: The insulin/IGF-1 (where IGF-1 is insulin-like growth factor-1) signaling pathway influences longevity, reproduction, and diapause in many organisms. Because of the fundamental importance of this system in animal physiology, we asked when during the animal's life it is required to regulate these different processes. We find that in Caenorhabditis elegans, the pathway acts during adulthood, to relatively advanced ages, to influence aging. In contrast, it regulates diapause during development. In addition, the pathway controls longevity and reproduction independently of one another. Together our findings show that life-span regulation can be dissociated temporally from phenotypes that might seem to decrease the quality of life.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Dillin, Andrew -- Crawford, Douglas K -- Kenyon, Cynthia -- 5RO1AG11816/AG/NIA NIH HHS/ -- New York, N.Y. -- Science. 2002 Oct 25;298(5594):830-4.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA 94143-0448, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12399591" target="_blank"〉PubMed〈/a〉
    Keywords: Aging ; Animals ; Caenorhabditis elegans/genetics/growth & development/metabolism/*physiology ; Caenorhabditis elegans Proteins/genetics/physiology ; DEAD-box RNA Helicases ; Forkhead Transcription Factors ; Insulin/*physiology ; Insulin-Like Growth Factor I/*physiology ; Life Cycle Stages/physiology ; Longevity ; Mutation ; Oxidative Stress ; RNA Helicases/genetics/physiology ; RNA Interference ; Receptor, Insulin/genetics/*physiology ; Reproduction ; *Signal Transduction ; Temperature ; Transcription Factors/genetics/physiology
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  • 45
    Publication Date: 2002-04-27
    Description: The introduction of biodegradable implant materials as well as minimally invasive surgical procedures in medicine has substantially improved health care within the past few decades. This report describes a group of degradable thermoplastic polymers that are able to change their shape after an increase in temperature. Their shape-memory capability enables bulky implants to be placed in the body through small incisions or to perform complex mechanical deformations automatically. A smart degradable suture was created to illustrate the potential of these shape-memory thermoplastics in biomedical applications.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Lendlein, Andreas -- Langer, Robert -- New York, N.Y. -- Science. 2002 May 31;296(5573):1673-6. Epub 2002 Apr 25.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉mnemoScience GmbH, Pauwelsstrabetae 19, D-52074 Aachen, Germany. a.lendlein@mnemoscience.de〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11976407" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; *Biocompatible Materials/chemical synthesis/chemistry ; Chemistry, Physical ; Dioxanes/chemistry ; Elasticity ; Elastomers ; Isocyanates/chemistry ; Mechanics ; Physicochemical Phenomena ; Polyesters/chemistry ; *Polymers/chemical synthesis/chemistry ; *Prostheses and Implants ; Rats ; Stress, Mechanical ; *Sutures ; Temperature ; Thermodynamics
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  • 46
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-03-16
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Hagmann, Michael -- New York, N.Y. -- Science. 2002 Mar 15;295(5562):2006-7.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11896256" target="_blank"〉PubMed〈/a〉
    Keywords: Acetic Acid/chemistry ; Amino Acids/chemistry ; Catalysis ; Chemistry, Physical/history ; *Evolution, Chemical ; History, 20th Century ; History, 21st Century ; Iron/chemistry ; Organic Chemicals/chemistry ; *Origin of Life ; Sulfides/chemistry ; Temperature ; Thermodynamics ; United States
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  • 47
    Publication Date: 2002-09-28
    Description: Unc104/KIF1A belongs to a class of monomeric kinesin motors that have been thought to possess an unusual motility mechanism. Unlike the unidirectional motion driven by the coordinated actions of the two heads in conventional kinesins, single-headed KIF1A was reported to undergo biased diffusional motion along microtubules. Here, we show that Unc104/KIF1A can dimerize and move unidirectionally and processively with rapid velocities characteristic of transport in living cells. These results suggest that Unc104/KIF1A operates in vivo by a mechanism similar to conventional kinesin and that regulation of motor dimerization may be used to control transport by this class of kinesins.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Tomishige, Michio -- Klopfenstein, Dieter R -- Vale, Ronald D -- AR42895/AR/NIAMS NIH HHS/ -- New York, N.Y. -- Science. 2002 Sep 27;297(5590):2263-7.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉The Howard Hughes Medical Institute and the Department of Cellular and Molecular Pharmacology, University of California, San Francisco, CA 94143, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12351789" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Animals ; Caenorhabditis elegans ; Caenorhabditis elegans Proteins/chemistry/physiology ; Diffusion ; Dimerization ; Humans ; Kinesin/*chemistry/physiology ; Liposomes ; Microtubules/*physiology ; Molecular Motor Proteins/*chemistry/*physiology ; Molecular Sequence Data ; Movement ; Mutation ; Nerve Tissue Proteins/*chemistry/*physiology ; Protein Structure, Tertiary ; Rats ; Recombinant Fusion Proteins/chemistry
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  • 48
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-10-05
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Pennisi, Elizabeth -- New York, N.Y. -- Science. 2002 Oct 4;298(5591):39.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12364761" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; *Cnidaria ; *Conservation of Natural Resources ; *Ecosystem ; Financing, Government ; *Marine Biology ; Research Support as Topic ; United States
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  • 49
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-11-16
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Li, Chi -- Thompson, Craig B -- New York, N.Y. -- Science. 2002 Nov 15;298(5597):1346-7.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Cancer Biology, Abramson Family Cancer Research Institute, University of Pennsylvania, Philadelphia, PA 19104, USA. drt@mail.med.upenn.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12434041" target="_blank"〉PubMed〈/a〉
    Keywords: Antineoplastic Agents/*pharmacology/therapeutic use ; *Apoptosis ; Asparagine/metabolism ; Aspartic Acid/metabolism ; Cyclin-Dependent Kinase Inhibitor p21 ; Cyclins/metabolism ; *DNA Damage ; DNA, Neoplasm/drug effects ; Genes, Retinoblastoma ; Genes, p53 ; Humans ; Models, Biological ; Mutation ; Neoplasms/*drug therapy/metabolism/*pathology ; Protein Binding ; Protein Structure, Tertiary ; Proto-Oncogene Proteins c-bcl-2/*metabolism ; Retinoblastoma Protein/metabolism ; Tumor Suppressor Protein p53/metabolism ; bcl-X Protein
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  • 50
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-10-12
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Kaiser, Jocelyn -- New York, N.Y. -- Science. 2002 Oct 11;298(5592):346-9.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12376680" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Dinoflagellida/pathogenicity/physiology ; Fish Diseases/*parasitology ; Fishes/parasitology ; Humans ; Mid-Atlantic Region ; Nervous System Diseases/etiology ; Neurotoxicity Syndromes/etiology ; Pfiesteria piscicida/cytology/growth & development/*pathogenicity/physiology ; Protozoan Infections, Animal/*parasitology ; Research ; Research Support as Topic ; Southeastern United States ; *Toxins, Biological/isolation & purification/metabolism/toxicity ; Virulence ; Water/*parasitology
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  • 51
    Publication Date: 2002-08-17
    Description: The enediynes exemplify nature's ingenuity. We have cloned and characterized the biosynthetic locus coding for perhaps the most notorious member of the nonchromoprotein enediyne family, calicheamicin. This gene cluster contains an unusual polyketide synthase (PKS) that is demonstrated to be essential for enediyne biosynthesis. Comparison of the calicheamicin locus with the locus encoding the chromoprotein enediyne C-1027 reveals that the enediyne PKS is highly conserved among these distinct enediyne families. Contrary to previous hypotheses, this suggests that the chromoprotein and nonchromoprotein enediynes are generated by similar biosynthetic pathways.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Ahlert, Joachim -- Shepard, Erica -- Lomovskaya, Natalia -- Zazopoulos, Emmanuel -- Staffa, Alfredo -- Bachmann, Brian O -- Huang, Kexue -- Fonstein, Leonid -- Czisny, Anne -- Whitwam, Ross E -- Farnet, Chris M -- Thorson, Jon S -- CA08748/CA/NCI NIH HHS/ -- CA84374/CA/NCI NIH HHS/ -- GM58196/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 2002 Aug 16;297(5584):1173-6.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Laboratory for Biosynthetic Chemistry, Pharmaceutical Sciences Division, School of Pharmacy, University of Wisconsin-Madison, 777 Highland Avenue, Madison, WI 53705, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12183629" target="_blank"〉PubMed〈/a〉
    Keywords: *Aminoglycosides ; Anti-Bacterial Agents/*biosynthesis ; Antibiotics, Antineoplastic/*biosynthesis ; Blotting, Southern ; Chromatography, High Pressure Liquid ; Cloning, Molecular ; Conserved Sequence ; Enediynes ; *Genes, Bacterial ; Micromonospora/enzymology/*genetics/metabolism ; Multienzyme Complexes/*chemistry/*genetics/metabolism ; Multigene Family ; Mutation ; Open Reading Frames ; Polymerase Chain Reaction ; Protein Structure, Tertiary ; Sequence Analysis, DNA
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  • 52
    Publication Date: 2002-09-07
    Description: The Golgi-localized, gamma-ear-containing, adenosine diphosphate ribosylation factor-binding proteins (GGAs) are multidomain proteins that bind mannose 6-phosphate receptors (MPRs) in the Golgi and have an essential role in lysosomal enzyme sorting. Here the GGAs and the coat protein adaptor protein-1 (AP-1) were shown to colocalize in clathrin-coated buds of the trans-Golgi networks of mouse L cells and human HeLa cells. Binding studies revealed a direct interaction between the hinge domains of the GGAs and the gamma-ear domain of AP-1. Further, AP-1 contained bound casein kinase-2 that phosphorylated GGA1 and GGA3, thereby causing autoinhibition. This could induce the directed transfer of the MPRs from GGAs to AP-1. MPRs that are defective in binding to GGAs are poorly incorporated into AP-1-containing clathrin-coated vesicles. Thus, the GGAs and AP-1 interact to package MPRs into AP-1-containing coated vesicles.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Doray, Balraj -- Ghosh, Pradipta -- Griffith, Janice -- Geuze, Hans J -- Kornfeld, Stuart -- R01 CA-08759/CA/NCI NIH HHS/ -- New York, N.Y. -- Science. 2002 Sep 6;297(5587):1700-3.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Internal Medicine, Washington University School of Medicine, 660 South Euclid Avenue, St. Louis, MO 63110, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12215646" target="_blank"〉PubMed〈/a〉
    Keywords: ADP-Ribosylation Factors/*metabolism ; Adaptor Proteins, Vesicular Transport ; Animals ; Biological Transport ; Carrier Proteins/*metabolism ; Cattle ; Cell Line ; Clathrin-Coated Vesicles/metabolism ; HeLa Cells ; Humans ; L Cells (Cell Line) ; Membrane Proteins/*metabolism ; Mice ; Mutation ; Phosphorylation ; Protein Binding ; Receptor, IGF Type 2/genetics/*metabolism ; Recombinant Proteins/metabolism ; trans-Golgi Network/*metabolism
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  • 53
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-04-16
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Meunier, Bernard -- New York, N.Y. -- Science. 2002 Apr 12;296(5566):270-1.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Laboratoire de Chimie de Coordination du CNRS, 31077 Toulouse cedex 04, France. bmeunier@lcc-toulouse.fr〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11951021" target="_blank"〉PubMed〈/a〉
    Keywords: Biodegradation, Environmental ; Catalysis ; Chlorine Compounds/chemistry ; Chlorophenols/*chemistry ; Dioxins/chemistry ; *Environmental Pollutants ; Ferric Compounds/*chemistry ; Heterocyclic Compounds with 4 or More Rings/*chemistry ; Hydrogen Peroxide/*chemistry ; Ligands ; Oxidation-Reduction ; Pentachlorophenol/*chemistry ; Pressure ; Temperature
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  • 54
    Publication Date: 2002-12-21
    Description: We present the first direct evidence of the presence of an intermediate singlet excited state (Sx) mediating the internal conversion from S2 to S1 in carotenoids. The S2 to Sx transition is extremely fast and is completed within approximately 50 femtoseconds. These results require a reassessment of the energy transfer pathways from carotenoids to chlorophylls in the primary step of photosynthesis.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Cerullo, G -- Polli, D -- Lanzani, G -- De Silvestri, S -- Hashimoto, H -- Cogdell, R J -- New York, N.Y. -- Science. 2002 Dec 20;298(5602):2395-8.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉National Laboratory for Ultrafast and Ultraintense Optical Science (INFM), Dipartimento di Fisica, Politecnico di Milano, Piazza L. da Vinci 32, 20133 Milano, Italy. giulio.cerullo@fisi.polimi.it〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12493917" target="_blank"〉PubMed〈/a〉
    Keywords: Carotenoids/*chemistry/*metabolism ; Chemistry, Physical ; Chlorophyll/chemistry/metabolism ; Cyclohexanes ; Energy Transfer ; *Light ; Photosynthesis ; Physicochemical Phenomena ; Spectrum Analysis ; Temperature ; beta Carotene/*chemistry/*metabolism
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  • 55
    Publication Date: 2002-07-27
    Description: Budding yeast Mec1, homolog of mammalian ATR, is an essential protein that mediates S-phase checkpoint responses and meiotic recombination. Elimination of Mec1 function leads to genomewide fork stalling followed by chromosome breakage. Breaks do not result from stochastic collapse of stalled forks or other incidental lesions; instead, they occur in specific regions of the genome during a G2 chromosomal transition. Break regions are found to be genetically encoded replication slow zones (RSZs), a newly discovered yeast chromosomal determinant. Thus, Mec1 has important functions in normal S phase and the genome instability of mec1 (and, analogously, ATR-/-) mutants stems from defects in these basic roles.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Cha, Rita S -- Kleckner, Nancy -- GM25326/GM/NIGMS NIH HHS/ -- R01 GM025326/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 2002 Jul 26;297(5581):602-6.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Molecular and Cellular Biology, Harvard University, Cambridge, MA 02138, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12142538" target="_blank"〉PubMed〈/a〉
    Keywords: *Chromosome Breakage ; Chromosomes, Fungal/*physiology ; *DNA Replication ; DNA, Fungal/*biosynthesis ; Fungal Proteins/*physiology ; G1 Phase ; G2 Phase ; Genome, Fungal ; Hydroxyurea/pharmacology ; *Interphase ; Intracellular Signaling Peptides and Proteins ; Mutation ; Protein-Serine-Threonine Kinases ; S Phase ; Saccharomyces cerevisiae/genetics/*physiology ; *Saccharomyces cerevisiae Proteins
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  • 56
    Publication Date: 2002-09-28
    Description: Polycomb group (PcG) proteins play important roles in maintaining the silent state of HOX genes. Recent studies have implicated histone methylation in long-term gene silencing. However, a connection between PcG-mediated gene silencing and histone methylation has not been established. Here we report the purification and characterization of an EED-EZH2 complex, the human counterpart of the Drosophila ESC-E(Z) complex. We demonstrate that the complex specifically methylates nucleosomal histone H3 at lysine 27 (H3-K27). Using chromatin immunoprecipitation assays, we show that H3-K27 methylation colocalizes with, and is dependent on, E(Z) binding at an Ultrabithorax (Ubx) Polycomb response element (PRE), and that this methylation correlates with Ubx repression. Methylation on H3-K27 facilitates binding of Polycomb (PC), a component of the PRC1 complex, to histone H3 amino-terminal tail. Thus, these studies establish a link between histone methylation and PcG-mediated gene silencing.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Cao, Ru -- Wang, Liangjun -- Wang, Hengbin -- Xia, Li -- Erdjument-Bromage, Hediye -- Tempst, Paul -- Jones, Richard S -- Zhang, Yi -- New York, N.Y. -- Science. 2002 Nov 1;298(5595):1039-43. Epub 2002 Sep 26.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biochemistry and Biophysics, Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599-7295, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12351676" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Carrier Proteins/isolation & purification/metabolism ; Cell Cycle Proteins/metabolism ; Chromatin/metabolism ; DNA-Binding Proteins/genetics/metabolism ; Drosophila ; Drosophila Proteins/genetics/*metabolism ; *Gene Silencing ; Genes, Homeobox ; HeLa Cells ; *Histone-Lysine N-Methyltransferase ; Histones/*metabolism ; *Homeodomain Proteins ; Humans ; Lysine/*metabolism ; Methylation ; Methyltransferases/isolation & purification/metabolism ; Nuclear Proteins/metabolism ; Nucleosomes/metabolism ; Peptide Mapping ; Polycomb Repressive Complex 1 ; Polycomb Repressive Complex 2 ; Precipitin Tests ; Protein Methyltransferases ; Proteins/isolation & purification/metabolism ; RNA Interference ; Repressor Proteins/isolation & purification/metabolism ; Response Elements ; Temperature ; *Transcription Factors
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  • 57
    Publication Date: 2002-10-12
    Description: Recent observations indicating that promoter identity influences alternative RNA-processing decisions have created interest in the regulatory interactions between RNA polymerase II transcription and precursor messenger RNA (pre-mRNA) processing. We examined the impact of steroid receptor-mediated transcription on RNA processing with reporter genes subject to alternative splicing driven by steroid-sensitive promoters. Steroid hormones affected the processing of pre-mRNA synthesized from steroid-sensitive promoters, but not from steroid-unresponsive promoters, in a steroid receptor-dependent and receptor-selective manner. Several nuclear receptor coregulators showed differential splicing effects, suggesting that steroid hormone receptors may simultaneously control gene transcription activity and exon content of the product mRNA by recruiting coregulators involved in both processes.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Auboeuf, Didier -- Honig, Arnd -- Berget, Susan M -- O'Malley, Bert W -- GM 38526/GM/NIGMS NIH HHS/ -- HD-08818/HD/NICHD NIH HHS/ -- New York, N.Y. -- Science. 2002 Oct 11;298(5592):416-9.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Molecular and Cellular Biology, Department of Biochemistry and Molecular Biology, Baylor College of Medicine, One Baylor Plaza, Houston, TX 77030, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12376702" target="_blank"〉PubMed〈/a〉
    Keywords: *Alternative Splicing ; Animals ; Antigens, CD44/genetics ; COS Cells ; Calcitonin/genetics ; Calcitonin Gene-Related Peptide/genetics ; Carrier Proteins/*metabolism ; Dexamethasone/metabolism/pharmacology ; Estradiol/metabolism/pharmacology ; Estrogen Receptor alpha ; Estrogen Receptor beta ; Exons ; Genes, Reporter ; HeLa Cells ; Humans ; *Intracellular Signaling Peptides and Proteins ; Mutation ; Progesterone/metabolism/pharmacology ; Promoter Regions, Genetic ; Protein Structure, Tertiary ; RNA Helicases/*metabolism ; RNA-Binding Protein FUS/*metabolism ; Receptors, Estrogen/genetics/metabolism ; Receptors, Glucocorticoid/metabolism ; Receptors, Progesterone/metabolism ; Response Elements ; *Transcription, Genetic ; Transfection ; Tumor Cells, Cultured
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  • 58
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-05-11
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Enserink, Martin -- New York, N.Y. -- Science. 2002 May 10;296(5570):1002-3.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12004096" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Bacillus anthracis/*classification/*genetics ; *Bioterrorism ; Cattle/microbiology ; DNA Fingerprinting ; Genetic Markers ; Genetic Variation ; *Genome, Bacterial ; Goats/microbiology ; Mutation ; Plasmids ; *Sequence Analysis, DNA
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  • 59
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-08-24
    Description: 〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2220017/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2220017/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Henry, Michelle R -- Cho, Mildred K -- Weaver, Meredith A -- Merz, Jon F -- R01 HG002034/HG/NHGRI NIH HHS/ -- R01 HG002034-01A1/HG/NHGRI NIH HHS/ -- R01 HG002034-01A1S1/HG/NHGRI NIH HHS/ -- R01 HG002034-01A1S2/HG/NHGRI NIH HHS/ -- R01 HG002034-02/HG/NHGRI NIH HHS/ -- R01 HG002034-03/HG/NHGRI NIH HHS/ -- R01HG02034/HG/NHGRI NIH HHS/ -- New York, N.Y. -- Science. 2002 Aug 23;297(5585):1279.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Center for Bioethics, University of Pennsylvania, Philadelphia, PA, 19104-3308, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12193770" target="_blank"〉PubMed〈/a〉
    Keywords: Academies and Institutes/legislation & jurisprudence ; Commerce/*legislation & jurisprudence ; *Dna ; Financing, Government ; *Genetics ; Interviews as Topic ; National Institutes of Health (U.S.) ; *Patents as Topic ; Research Support as Topic ; *Technology Transfer ; United States ; Universities/*legislation & jurisprudence
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  • 60
    Publication Date: 2002-08-17
    Description: C-1027 is a potent antitumor agent with a previously undescribed molecular architecture and mode of action. Cloning and characterization of the 85-kilobase C-1027 biosynthesis gene cluster from Streptomyces globisporus revealed (i) an iterative type I polyketide synthase that is distinct from any bacterial polyketide synthases known to date, (ii) a general polyketide pathway for the biosynthesis of both the 9- and 10-membered enediyne antibiotics, and (iii) a convergent biosynthetic strategy for the C-1027 chromophore from four building blocks. Manipulation of genes governing C-1027 biosynthesis allowed us to produce an enediyne compound in a predicted manner.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Liu, Wen -- Christenson, Steven D -- Standage, Scott -- Shen, Ben -- AI51689/AI/NIAID NIH HHS/ -- CA78747/CA/NCI NIH HHS/ -- T32 GM07377/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 2002 Aug 16;297(5584):1170-3.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Division of Pharmaceutical Sciences, University of Wisconsin, Madison, WI 53705, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12183628" target="_blank"〉PubMed〈/a〉
    Keywords: *Aminoglycosides ; Anti-Bacterial Agents/*biosynthesis ; Antibiotics, Antineoplastic/*biosynthesis ; Chromatography, High Pressure Liquid ; Cloning, Molecular ; Enediynes ; *Genes, Bacterial ; Multienzyme Complexes/chemistry/genetics/metabolism ; Multigene Family ; Mutation ; Open Reading Frames ; Protein Structure, Tertiary ; Streptomyces/enzymology/*genetics/*metabolism
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  • 61
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-07-20
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Vogel, Gretchen -- New York, N.Y. -- Science. 2002 Jul 19;297(5580):328.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12130764" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Biological Evolution ; Cell Count ; Cell Division ; Cells, Cultured ; Cerebral Cortex/cytology/*embryology ; Cytoskeletal Proteins/*genetics/physiology ; Gene Expression Profiling ; Gene Expression Regulation, Developmental ; Homeodomain Proteins/*genetics/physiology ; Humans ; Mice ; Mice, Transgenic ; Mutation ; Neurons/cytology/physiology ; Pituitary Gland/*cytology/growth & development ; Retina/*cytology/growth & development ; Stem Cells/cytology/*physiology ; Trans-Activators/*genetics/physiology ; beta Catenin
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  • 62
    Publication Date: 2002-02-16
    Description: Animal SGT1 is a component of Skp1-Cullin-F-box protein (SCF) ubiquitin ligases that target regulatory proteins for degradation. Mutations in one (SGT1b) of two highly homologous Arabidopsis SGT1 genes disable early plant defenses conferred by multiple resistance (R) genes. Loss of SGT1b function in resistance is not compensated for by SGT1a. R genes differ in their requirements for SGT1b and a second resistance signaling gene, RAR1, that was previously implicated as an SGT1 interactor. Moreover, SGT1b and RAR1 contribute additively to RPP5-mediated pathogen recognition. These data imply both operationally distinct and cooperative functions of SGT1 and RAR1 in plant disease resistance.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Austin, Mark J -- Muskett, Paul -- Kahn, Katherine -- Feys, Bart J -- Jones, Jonathan D G -- Parker, Jane E -- New York, N.Y. -- Science. 2002 Mar 15;295(5562):2077-80. Epub 2002 Feb 14.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Sainsbury Laboratory, John Innes Centre, Colney Lane, Norwich NR4 7UH, UK.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11847308" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Motifs ; Amino Acid Sequence ; Arabidopsis/*genetics/metabolism/microbiology ; Arabidopsis Proteins/chemistry/*genetics/*metabolism ; Carrier Proteins/chemistry/genetics/*metabolism ; Cell Cycle Proteins/chemistry/*genetics/*metabolism ; Cell Death ; *Genes, Plant ; Immunity, Innate ; Molecular Sequence Data ; Mutation ; Oomycetes/pathogenicity/physiology ; *Plant Diseases ; Plant Leaves/microbiology ; Plant Proteins/*genetics/physiology ; Protein Structure, Tertiary ; Sequence Alignment ; Spores, Fungal/physiology
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  • 63
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-12-10
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Morgan, Jack A -- New York, N.Y. -- Science. 2002 Dec 6;298(5600):1903-4.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉USDA-ARS Rangeland Resources Research Unit, 1701 Centre Avenue, Fort Collins, CO 80526, USA. morgan@lamar.colostate.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12471239" target="_blank"〉PubMed〈/a〉
    Keywords: Atmosphere ; California ; *Carbon Dioxide/metabolism ; Climate ; *Ecosystem ; Photosynthesis ; Poaceae/*growth & development/metabolism ; Soil ; Temperature
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  • 64
    Publication Date: 2002-05-23
    Description: Lymphocyte motility is vital for trafficking within lymphoid organs and for initiating contact with antigen-presenting cells. Visualization of these processes has previously been limited to in vitro systems. We describe the use of two-photon laser microscopy to image the dynamic behavior of individual living lymphocytes deep within intact lymph nodes. In their native environment, T cells achieved peak velocities of more than 25 micrometers per minute, displaying a motility coefficient that is five to six times that of B cells. Antigenic challenge changed T cell trajectories from random walks to "swarms" and stable clusters. Real-time two-photon imaging reveals lymphocyte behaviors that are fundamental to the initiation of the immune response.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Miller, Mark J -- Wei, Sindy H -- Parker, Ian -- Cahalan, Michael D -- GM-41514/GM/NIGMS NIH HHS/ -- GM-48071/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 2002 Jun 7;296(5574):1869-73. Epub 2002 May 16.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Physiology and Biophysics, University of California, Irvine, CA 92697-4561, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12016203" target="_blank"〉PubMed〈/a〉
    Keywords: Adoptive Transfer ; Animals ; Antigen-Presenting Cells/immunology/physiology ; Antigens/*immunology ; B-Lymphocytes/cytology/immunology/physiology ; Cell Division ; Cell Movement ; Cell Size ; Fluoresceins ; Fluorescent Dyes ; Image Processing, Computer-Assisted ; Lasers ; Lymph Nodes/cytology/*immunology ; *Lymphocyte Activation ; Mice ; Mice, Inbred BALB C ; Microscopy/methods ; Motion Pictures as Topic ; Photons ; Rhodamines ; Succinimides ; T-Lymphocytes/cytology/immunology/*physiology ; Temperature
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  • 65
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-05-11
    Description: Thermophilic microbial inhabitants of active seafloor and continental hot springs populate the deepest branches of the universal phylogenetic tree, making hydrothermal ecosystems the most ancient continuously inhabited ecosystems on Earth. Geochemical consequences of hot water-rock interactions render these environments habitable and supply a diverse array of energy sources. Clues to the strategies for how life thrives in these dynamic ecosystems are beginning to be elucidated through a confluence of biogeochemistry, microbiology, ecology, molecular biology, and genomics. These efforts have the potential to reveal how ecosystems originate, the extent of the subsurface biosphere, and the driving forces of evolution.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Reysenbach, Anna-Louise -- Shock, Everett -- New York, N.Y. -- Science. 2002 May 10;296(5570):1077-82.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biology, Portland State University, Portland, OR 97201, USA. reysenbacha@pdx.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12004120" target="_blank"〉PubMed〈/a〉
    Keywords: Adaptation, Physiological ; Archaea/classification/genetics/metabolism/*physiology ; Bacteria/classification/genetics/metabolism ; *Bacterial Physiological Phenomena ; Biofilms/growth & development ; Biological Evolution ; *Ecosystem ; Energy Metabolism ; Environmental Microbiology ; Gene Transfer, Horizontal ; Genetic Variation ; *Geologic Sediments ; *Hot Temperature ; Mutation ; Phylogeny ; *Water Microbiology
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  • 66
    Publication Date: 2002-07-27
    Description: Checkpoint-mediated control of replicating chromosomes is essential for preventing cancer. In yeast, Rad53 kinase protects stalled replication forks from pathological rearrangements. To characterize the mechanisms controlling fork integrity, we analyzed replication intermediates formed in response to replication blocks using electron microscopy. At the forks, wild-type cells accumulate short single-stranded regions, which likely causes checkpoint activation, whereas rad53 mutants exhibit extensive single-stranded gaps and hemi-replicated intermediates, consistent with a lagging-strand synthesis defect. Further, rad53 cells accumulate Holliday junctions through fork reversal. We speculate that, in checkpoint mutants, abnormal replication intermediates begin to form because of uncoordinated replication and are further processed by unscheduled recombination pathways, causing genome instability.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Sogo, Jose M -- Lopes, Massimo -- Foiani, Marco -- New York, N.Y. -- Science. 2002 Jul 26;297(5581):599-602.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Institute of Cell Biology, ETH Honggerberg, CH-8093 Zurich, Switzerland.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12142537" target="_blank"〉PubMed〈/a〉
    Keywords: *Cell Cycle Proteins ; Checkpoint Kinase 2 ; Cross-Linking Reagents/pharmacology ; *DNA Replication ; DNA, Fungal/biosynthesis/chemistry/*metabolism ; DNA, Single-Stranded/chemistry/*metabolism ; Furocoumarins/pharmacology ; Hydroxyurea/pharmacology ; Microscopy, Electron ; Mutation ; Nucleic Acid Conformation ; Nucleosomes/metabolism/ultrastructure ; Phosphorylation ; Protein-Serine-Threonine Kinases/genetics/metabolism ; *Recombination, Genetic ; Saccharomyces cerevisiae/*genetics/*metabolism ; *Saccharomyces cerevisiae Proteins
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  • 67
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-06-18
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Bada, Jeffrey L -- Lazcano, Antonio -- New York, N.Y. -- Science. 2002 Jun 14;296(5575):1982-3.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Scripps Institution of Oceanography, University of California at San Diego, La Jolla, CA 02093, USA. jbada@ucsd.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12065824" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acids/chemistry ; *Biopolymers/chemistry ; Catalysis ; DNA/chemistry ; Earth (Planet) ; *Evolution, Chemical ; *Origin of Life ; Peptides/chemistry ; *Polymers/chemistry ; Protein Biosynthesis ; Proteins/chemistry ; RNA/chemistry ; Temperature ; Thermodynamics
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    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 68
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-11-20
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Loomis, Dana -- New York, N.Y. -- Science. 2002 Nov 15;298(5597):1335-6.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12436979" target="_blank"〉PubMed〈/a〉
    Keywords: *Advisory Committees ; Federal Government ; Human Engineering ; *National Institute for Occupational Safety and Health (U.S.) ; Peer Review, Research ; *Politics ; Public Policy ; Research Support as Topic ; United States ; *United States Dept. of Health and Human Services
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  • 69
    Publication Date: 2002-08-24
    Description: Polyketide synthases (PKSs) assemble the polyketide carbon backbone by sequential decarboxylative condensation of acyl coenzyme A (CoA) precursors, and the C-C bond-forming step in this process is catalyzed by the beta-ketoacyl synthase (KS) domain or subunit. Genetic and biochemical characterization of the nonactin biosynthesis gene cluster from Streptomyces griseus revealed two KSs, NonJ and NonK, that are highly homologous to known KSs but catalyze sequential condensation of the acyl CoA substrates by forming C-O rather than C-C bonds. This chemistry can be used in PKS engineering to increase the scope and diversity of polyketide biosynthesis.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Kwon, Hyung-Jin -- Smith, Wyatt C -- Scharon, A Janelle -- Hwang, Sung Hee -- Kurth, Mark J -- Shen, Ben -- AI51689/AI/NIAID NIH HHS/ -- T32 GM08505/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 2002 Aug 23;297(5585):1327-30.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Division of Pharmaceutical Sciences and, Department of Chemistry, University of Wisconsin, Madison, WI 53705, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12193782" target="_blank"〉PubMed〈/a〉
    Keywords: 3-Oxoacyl-(Acyl-Carrier-Protein) Synthase/*chemistry/*metabolism ; Acyl Coenzyme A/metabolism ; Amino Acid Sequence ; Binding Sites ; Catalysis ; Chromatography, High Pressure Liquid ; Genes, Bacterial ; Macrolides/chemistry/*metabolism ; Molecular Sequence Data ; Multienzyme Complexes/*chemistry/*metabolism ; Multigene Family ; Mutation ; Protein Engineering ; Protein Subunits ; Sequence Alignment ; Spectrometry, Mass, Electrospray Ionization ; Streptomyces/genetics ; Streptomyces griseus/*enzymology/genetics ; Transformation, Bacterial
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  • 70
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-04-27
    Description: Human disease phenotypes are controlled not only by genes but by lawful self-organizing networks that display system-wide dynamics. These networks range from metabolic pathways to signaling pathways that regulate hormone action. When perturbed, networks alter their output of matter and energy which, depending on the environmental context, can produce either a pathological or a normal phenotype. Study of the dynamics of these networks by approaches such as metabolic control analysis may provide new insights into the pathogenesis and treatment of complex diseases.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Strohman, Richard -- New York, N.Y. -- Science. 2002 Apr 26;296(5568):701-3.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Molecular and Cell Biology, 229 Stanley Hall, No. 3206, University of California at Berkeley, Berkeley, CA 94720-3206, USA. E-mail: strohman@uclink4.berkeley.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11976445" target="_blank"〉PubMed〈/a〉
    Keywords: Alzheimer Disease/metabolism ; *Disease ; Genomics ; *Genotype ; Humans ; *Metabolism ; Molecular Biology ; Parkinson Disease/metabolism ; *Phenotype ; Proteins/metabolism ; Research Support as Topic ; Signal Transduction
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  • 71
    Publication Date: 2002-02-16
    Description: Phosphorylation of mitogen-activated protein kinases (MAPKs) on specific tyrosine and threonine sites by MAP kinase kinases (MAPKKs) is thought to be the sole activation mechanism. Here, we report an unexpected activation mechanism for p38alpha MAPK that does not involve the prototypic kinase cascade. Rather it depends on interaction of p38alpha with TAB1 [transforming growth factor-beta-activated protein kinase 1 (TAK1)-binding protein 1] leading to autophosphorylation and activation of p38alpha. We detected formation of a TRAF6-TAB1-p38alpha complex and showed stimulus-specific TAB1-dependent and TAB1-independent p38alpha activation. These findings suggest that alternative activation pathways contribute to the biological responses of p38alpha to various stimuli.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Ge, Baoxue -- Gram, Hermann -- Di Padova, Franco -- Huang, Betty -- New, Liguo -- Ulevitch, Richard J -- Luo, Ying -- Han, Jiahuai -- AI41637/AI/NIAID NIH HHS/ -- HL07195/HL/NHLBI NIH HHS/ -- New York, N.Y. -- Science. 2002 Feb 15;295(5558):1291-4.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Immunology, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11847341" target="_blank"〉PubMed〈/a〉
    Keywords: *Adaptor Proteins, Signal Transducing ; Binding Sites ; Calcium-Calmodulin-Dependent Protein Kinases/metabolism ; Carrier Proteins/chemistry/genetics/*metabolism ; Cell Line ; *Drosophila Proteins ; Enzyme Activation ; Enzyme Inhibitors/pharmacology ; Humans ; Imidazoles/pharmacology ; *Intracellular Signaling Peptides and Proteins ; MAP Kinase Kinase 6 ; *MAP Kinase Signaling System ; Membrane Glycoproteins/metabolism ; Mitogen-Activated Protein Kinase 14 ; Mitogen-Activated Protein Kinase Kinases/metabolism ; Mitogen-Activated Protein Kinases/antagonists & ; inhibitors/chemistry/genetics/*metabolism ; Mutation ; Peptide Mapping ; Peroxynitrous Acid/pharmacology ; Phosphorylation ; Proteins/metabolism ; Pyridines/pharmacology ; Receptors, Cell Surface/metabolism ; Recombinant Fusion Proteins/metabolism ; TNF Receptor-Associated Factor 6 ; Toll-Like Receptors ; Tumor Necrosis Factor-alpha/pharmacology ; Two-Hybrid System Techniques ; p38 Mitogen-Activated Protein Kinases
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  • 72
    Publication Date: 2002-02-02
    Description: The hypoxia-inducible factors (HIFs) 1alpha and 2alpha are key mammalian transcription factors that exhibit dramatic increases in both protein stability and intrinsic transcriptional potency during low-oxygen stress. This increased stability is due to the absence of proline hydroxylation, which in normoxia promotes binding of HIF to the von Hippel-Lindau (VHL tumor suppressor) ubiquitin ligase. We now show that hypoxic induction of the COOH-terminal transactivation domain (CAD) of HIF occurs through abrogation of hydroxylation of a conserved asparagine in the CAD. Inhibitors of Fe(II)- and 2-oxoglutarate-dependent dioxygenases prevented hydroxylation of the Asn, thus allowing the CAD to interact with the p300 transcription coactivator. Replacement of the conserved Asn by Ala resulted in constitutive p300 interaction and strong transcriptional activity. Full induction of HIF-1alpha and -2alpha, therefore, relies on the abrogation of both Pro and Asn hydroxylation, which during normoxia occur at the degradation and COOH-terminal transactivation domains, respectively.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Lando, David -- Peet, Daniel J -- Whelan, Dean A -- Gorman, Jeffrey J -- Whitelaw, Murray L -- New York, N.Y. -- Science. 2002 Feb 1;295(5556):858-61.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Molecular Biosciences (Biochemistry), Adelaide University, SA 5005, Australia.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11823643" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Amino Acid Substitution ; Animals ; Asparagine/*metabolism ; Basic Helix-Loop-Helix Transcription Factors ; Cell Hypoxia/*physiology ; Cell Line ; Humans ; Hydroxylation ; Hypoxia-Inducible Factor 1, alpha Subunit ; Mass Spectrometry ; Mice ; Mixed Function Oxygenases/metabolism ; Molecular Sequence Data ; Mutation ; Oxygen/*physiology ; Proline/metabolism ; Protein Structure, Tertiary ; Recombinant Fusion Proteins/metabolism ; Trans-Activators/chemistry/genetics/*metabolism ; Transcription Factors/chemistry/genetics/*metabolism ; *Transcriptional Activation
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  • 73
    Publication Date: 2002-11-02
    Description: 1,1,1-Trichloroethane (TCA) is a ubiquitous environmental pollutant because of its widespread use as an industrial solvent, its improper disposal, and its substantial emission to the atmosphere. We report the isolation of an anaerobic bacterium, strain TCA1, that reductively dechlorinates TCA to 1,1-dichloroethane and chloroethane. Strain TCA1 required H2 as an electron donor and TCA as an electron acceptor for growth, indicating that dechlorination is a respiratory process. Phylogenetic analysis indicated that strain TCA1 is related to gram-positive bacteria with low DNA G+C content and that its closest relative is Dehalobacter restrictus, an obligate H2-oxidizing, chloroethene-respiring bacterium.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Sun, Baolin -- Griffin, Benjamin M -- Ayala-del-Rio, Hector L -- Hashsham, Syed A -- Tiedje, James M -- New York, N.Y. -- Science. 2002 Nov 1;298(5595):1023-5.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Center for Microbial Ecology, Department of Microbiology and Molecular Genetics, Michigan State University, East Lansing, MI 48824-1325, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12411705" target="_blank"〉PubMed〈/a〉
    Keywords: Anaerobiosis ; Bacteria, Anaerobic/classification/cytology/isolation & purification/metabolism ; Base Composition ; Biodegradation, Environmental ; Culture Media ; DNA, Ribosomal/genetics ; Electron Transport ; Energy Metabolism ; Environmental Pollutants/*metabolism ; Ethyl Chloride/metabolism ; Formates/metabolism ; Geologic Sediments/*microbiology ; Hydrogen/metabolism ; Oxidation-Reduction ; Peptococcaceae/classification/cytology/growth & development/*isolation & ; purification/*metabolism ; Phylogeny ; RNA, Ribosomal, 16S/genetics ; Soil Microbiology ; Temperature ; Trichloroethanes/*metabolism
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  • 74
    Publication Date: 2002-12-10
    Description: We demonstrated in laboratory experiments that temperature control of marine bacteria action on diatoms strongly influences the coupling of biogenic silica and organic carbon preservation. Low temperature intensified the selective regeneration of organic matter by marine bacteria as the silicon:carbon preservation ratio gradually increased from approximately 1 at 33 degrees C to approximately 6 at -1.8 degrees C. Temperature control of bacteria-mediated selective preservation of silicon versus carbon should help to interpret and model the variable coupling of silicon and carbon sinking fluxes and the spatial patterns of opal accumulation in oceanic systems with different temperature regimes.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Bidle, Kay D -- Manganelli, Maura -- Azam, Farooq -- New York, N.Y. -- Science. 2002 Dec 6;298(5600):1980-4.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Marine Biology Research Division, Scripps Institution of Oceanography, University of California San Diego, La Jolla, CA 92093-0202, USA. bidle@imcs.rutgers.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12471255" target="_blank"〉PubMed〈/a〉
    Keywords: Adaptation, Physiological ; Antarctic Regions ; Bacteria/growth & development/isolation & purification/*metabolism ; California ; Carbon/*metabolism ; Diatoms/*metabolism ; Endopeptidases/metabolism ; Food Chain ; Geologic Sediments ; Hydrolysis ; Oceans and Seas ; Pacific Ocean ; Seawater/chemistry/*microbiology ; Silicon/*metabolism ; Temperature
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  • 75
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-05-25
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Couzin, Jennifer -- New York, N.Y. -- Science. 2002 May 24;296(5572):1391-3.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12029111" target="_blank"〉PubMed〈/a〉
    Keywords: *Chromosome Mapping/economics ; Continental Population Groups/genetics ; Costs and Cost Analysis ; Databases, Nucleic Acid ; Financing, Government ; Genetic Predisposition to Disease ; *Genome, Human ; *Genomics ; Genotype ; *Haplotypes ; Humans ; Mutation ; National Institutes of Health (U.S.) ; Polymorphism, Single Nucleotide ; Research Support as Topic ; United States
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  • 76
    Publication Date: 2002-09-21
    Description: To make messenger RNA transcripts, bacteriophage T7 RNA polymerase (T7 RNAP) undergoes a transition from an initiation phase, which only makes short RNA fragments, to a stable elongation phase. We have determined at 2.1 angstrom resolution the crystal structure of a T7 RNAP elongation complex with 30 base pairs of duplex DNA containing a "transcription bubble" interacting with a 17-nucleotide RNA transcript. The transition from an initiation to an elongation complex is accompanied by a major refolding of the amino-terminal 300 residues. This results in loss of the promoter binding site, facilitating promoter clearance, and creates a tunnel that surrounds the RNA transcript after it peels off a seven-base pair heteroduplex. Formation of the exit tunnel explains the enhanced processivity of the elongation complex. Downstream duplex DNA binds to the fingers domain, and its orientation relative to upstream DNA in the initiation complex implies an unwinding that could facilitate formation of the open promoter complex.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Yin, Y Whitney -- Steitz, Thomas A -- GM57510/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 2002 Nov 15;298(5597):1387-95. Epub 2002 Sep 19.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Molecular Biophysics and Biochemistry, Yale University, 266 Whitney Avenue, New Haven, CT 06520-8114, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12242451" target="_blank"〉PubMed〈/a〉
    Keywords: Bacteriophage T7/enzymology ; Binding Sites ; Crystallization ; Crystallography, X-Ray ; DNA/*chemistry/metabolism ; DNA-Directed RNA Polymerases/*chemistry/genetics/*metabolism ; Models, Molecular ; Mutation ; N-Acetylmuramoyl-L-alanine Amidase/metabolism ; Nucleic Acid Heteroduplexes ; Promoter Regions, Genetic ; Protein Conformation ; Protein Folding ; Protein Structure, Secondary ; Protein Structure, Tertiary ; Protein Subunits ; RNA Polymerase II/chemistry ; RNA, Messenger/*chemistry/metabolism ; Taq Polymerase/chemistry ; Templates, Genetic ; Transcription Initiation Site ; *Transcription, Genetic ; Viral Proteins
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  • 77
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-02-09
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Marx, Jean -- New York, N.Y. -- Science. 2002 Feb 8;295(5557):943-5.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11834787" target="_blank"〉PubMed〈/a〉
    Keywords: Azacitidine/*analogs & derivatives/pharmacology ; Cell Division ; Cell Transformation, Neoplastic ; DNA (Cytosine-5-)-Methyltransferase/metabolism ; *DNA Methylation ; *Gene Silencing ; *Genes, Tumor Suppressor ; Humans ; Leukemia, Promyelocytic, Acute/blood/*genetics/pathology ; Leukocytes/cytology ; Mutation ; Neoplasm Proteins/genetics/*metabolism ; Oncogene Proteins, Fusion/genetics/*metabolism ; Promoter Regions, Genetic ; Receptors, Retinoic Acid/*genetics ; Tretinoin/metabolism/pharmacology ; Zinc/pharmacology
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  • 78
    Publication Date: 2002-06-18
    Description: To identify genetic determinants of hypoxic cell death, we screened for hypoxia-resistant (Hyp) mutants in Caenorhabditis elegans and found that specific reduction-of-function (rf) mutants of daf-2, an insulin/insulinlike growth factor (IGF) receptor (INR) homolog gene, were profoundly Hyp. The hypoxia resistance was acutely inducible just before hypoxic exposure and was mediated through an AKT-1/PDK-1/forkhead transcription factor pathway overlapping with but distinct from signaling pathways regulating life-span and stress resistance. Selective neuronal and muscle expression of daf-2(+) restored hypoxic death, and daf-2(rf) prevented hypoxia-induced muscle and neuronal cell death, which demonstrates a potential for INR modulation in prophylaxis against hypoxic injury of neurons and myocytes.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Scott, Barbara A -- Avidan, Michael S -- Crowder, C Michael -- R01 NS045905/NS/NINDS NIH HHS/ -- New York, N.Y. -- Science. 2002 Jun 28;296(5577):2388-91. Epub 2002 Jun 13.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Anesthesiology, Washington University School of Medicine, St. Louis, MO 63110, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12065745" target="_blank"〉PubMed〈/a〉
    Keywords: 3-Phosphoinositide-Dependent Protein Kinases ; Alleles ; Animals ; Anoxia/genetics ; Axons/ultrastructure ; Caenorhabditis elegans/genetics/growth & development/*physiology ; Caenorhabditis elegans Proteins/genetics/*physiology ; Cell Death ; Cell Nucleus/ultrastructure ; Cell Survival ; Forkhead Transcription Factors ; Genes, Helminth ; Intestines/cytology/metabolism ; Longevity ; Movement ; Muscles/cytology/metabolism/ultrastructure ; Mutation ; Mutation, Missense ; Neurons/cytology/metabolism/ultrastructure ; Phenotype ; *Phosphatidylinositol 3-Kinases ; Protein-Serine-Threonine Kinases/metabolism ; Protein-Tyrosine Kinases/genetics/physiology ; Receptor, Insulin/genetics/*physiology ; *Signal Transduction ; Temperature ; Transcription Factors/genetics/physiology
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  • 79
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-02-16
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Gibbons, Ann -- New York, N.Y. -- Science. 2002 Feb 15;295(5558):1217.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11847321" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; *Biological Evolution ; Cercopithecidae ; DNA/*genetics ; Evolution, Molecular ; *Fossils ; *Hominidae ; Humans ; Mutation ; Pan troglodytes
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  • 80
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-12-14
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Scott, Ian C -- Stainier, Didier Y R -- New York, N.Y. -- Science. 2002 Dec 13;298(5601):2141-2.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biochemistry and Biophysics, University of California, San Francisco, CA 94143, USA. ianjr88@itsa.ucsf.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12481123" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Bromodeoxyuridine/metabolism ; *Cell Cycle Proteins ; Cell Differentiation ; *Cell Division ; Extremities/physiology ; Heart/*physiology ; Heart Injuries/pathology/physiopathology ; Heart Ventricles/surgery ; Humans ; Mice ; Mutation ; Myocytes, Cardiac/*physiology ; *Protein Kinases ; Protein-Serine-Threonine Kinases/genetics/metabolism ; Protein-Tyrosine Kinases/genetics/metabolism ; *Regeneration/genetics/physiology ; Zebrafish/genetics/*physiology ; *Zebrafish Proteins
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  • 81
    Publication Date: 2002-06-29
    Description: Comparison of two fully sequenced genomes of Buchnera aphidicola, the obligate endosymbionts of aphids, reveals the most extreme genome stability to date: no chromosome rearrangements or gene acquisitions have occurred in the past 50 to 70 million years, despite substantial sequence evolution and the inactivation and loss of individual genes. In contrast, the genomes of their closest free-living relatives, Escherichia coli and Salmonella spp., are more than 2000-fold more labile in content and gene order. The genomic stasis of B. aphidicola, likely attributable to the loss of phages, repeated sequences, and recA, indicates that B. aphidicola is no longer a source of ecological innovation for its hosts.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Tamas, Ivica -- Klasson, Lisa -- Canback, Bjorn -- Naslund, A Kristina -- Eriksson, Ann-Sofie -- Wernegreen, Jennifer J -- Sandstrom, Jonas P -- Moran, Nancy A -- Andersson, Siv G E -- New York, N.Y. -- Science. 2002 Jun 28;296(5577):2376-9.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Molecular Evolution, Evolutionary Biology Center, University of Uppsala, Uppsala, Sweden.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12089438" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Aphids/*microbiology/physiology ; Bacterial Proteins/chemistry/genetics ; Biological Evolution ; Buchnera/*genetics/physiology ; DNA, Intergenic ; Diet ; Ecosystem ; Escherichia coli/genetics ; *Evolution, Molecular ; Genes, Bacterial ; Genetic Variation ; *Genome, Bacterial ; Molecular Sequence Data ; Mutation ; Operon ; Pseudogenes ; Recombination, Genetic ; Repetitive Sequences, Nucleic Acid ; Salmonella typhimurium/genetics ; Species Specificity ; *Symbiosis
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  • 82
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-01-05
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Tatar, Marc -- Rand, David M -- New York, N.Y. -- Science. 2002 Jan 4;295(5552):54-5.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Ecology and Evolutionary Biology, Brown University, Providence, RI 02912, USA. marc_tatar@brown.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11778030" target="_blank"〉PubMed〈/a〉
    Keywords: *Aging ; Animals ; Caenorhabditis elegans/genetics/growth & development/metabolism/*physiology ; Caenorhabditis elegans Proteins/genetics/physiology ; Cell Nucleus/metabolism ; Diet ; Electron Transport ; Energy Metabolism ; Escherichia coli/metabolism ; Fermentation ; Helminth Proteins/genetics/physiology ; Insulin/metabolism ; Larva/growth & development/metabolism ; *Longevity ; Mitochondria/metabolism ; Mutation ; Reactive Oxygen Species/metabolism ; Receptor, Insulin/genetics/physiology ; Receptors, Cytoplasmic and Nuclear/genetics/physiology ; Signal Transduction ; Ubiquinone/administration & dosage/*metabolism
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  • 83
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-09-28
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Jenuwein, Thomas -- New York, N.Y. -- Science. 2002 Sep 27;297(5590):2215-8.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Research Institute of Molecular Pathology (IMP), Vienna Biocenter, Dr. Bohrgasse 7, A-1030 Vienna, Austria. jenuwein@nt.imp.univie.ac.at〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12351775" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Cell Nucleus/metabolism ; DNA Methylation ; DNA, Fungal/genetics/metabolism ; DNA, Protozoan/genetics/metabolism ; Endoribonucleases/genetics/metabolism ; Gene Silencing ; *Genome ; Heterochromatin/genetics/*metabolism ; Histones/metabolism ; Methylation ; Models, Genetic ; Mutation ; Nuclear Proteins/chemistry/genetics/metabolism ; Phosphoproteins/chemistry/genetics/metabolism ; *Protozoan Proteins ; RNA Replicase/genetics/metabolism ; RNA, Double-Stranded/metabolism ; RNA, Fungal/genetics/metabolism ; RNA, Messenger/genetics/metabolism ; RNA, Protozoan/genetics/metabolism ; RNA, Small Nuclear/*metabolism ; RNA, Untranslated/metabolism ; *Repetitive Sequences, Nucleic Acid ; Ribonuclease III ; Schizosaccharomyces/*genetics/metabolism ; Schizosaccharomyces pombe Proteins/genetics/metabolism ; Tetrahymena/*genetics/metabolism ; Transcription, Genetic
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  • 84
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-12-21
    Description: Phenotypic variation among organisms is central to evolutionary adaptations underlying natural and artificial selection, and also determines individual susceptibility to common diseases. These types of complex traits pose special challenges for genetic analysis because of gene-gene and gene-environment interactions, genetic heterogeneity, low penetrance, and limited statistical power. Emerging genome resources and technologies are enabling systematic identification of genes underlying these complex traits. We propose standards for proof of gene discovery in complex traits and evaluate the nature of the genes identified to date. These proof-of-concept studies demonstrate the insights that can be expected from the accelerating pace of gene discovery in this field.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Glazier, Anne M -- Nadeau, Joseph H -- Aitman, Timothy J -- New York, N.Y. -- Science. 2002 Dec 20;298(5602):2345-9.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Physiological Genomics and Medicine Group, MRC Clinical Sciences Centre, Hammersmith Hospital, Imperial College Faculty of Medicine, Ducane Road, London W12 0NN, UK.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12493905" target="_blank"〉PubMed〈/a〉
    Keywords: Alleles ; Animals ; Chromosome Mapping ; Genetic Linkage ; *Genetic Predisposition to Disease ; Genetic Variation ; Humans ; *Multifactorial Inheritance ; Mutation ; Phenotype ; Plants/genetics ; *Quantitative Trait Loci ; *Quantitative Trait, Heritable ; Saccharomyces cerevisiae/genetics ; Sequence Analysis, DNA
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  • 85
    Publication Date: 2002-09-28
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Zerhouni, Elias -- New York, N.Y. -- Science. 2002 Sep 27;297(5590):2197-8.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12351769" target="_blank"〉PubMed〈/a〉
    Keywords: Biological Specimen Banks ; Bioterrorism ; Budgets ; Clinical Trials as Topic ; Financing, Government ; National Institutes of Health (U.S.)/economics/*organization & administration ; *Research ; Research Support as Topic ; Stem Cells ; United States
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  • 86
    Publication Date: 2002-02-23
    Description: The identification of pathways mediated by the kinase Cdk5 and the ligand reelin has provided a conceptual framework for exploring the molecular mechanisms underlying proper lamination of the developing mammalian cerebral cortex. In this report, we identify a component of the regulation of Cdk5-mediated cortical lamination by genetic analysis of the roles of the class III POU domain transcription factors, Brn-1 and Brn-2, expressed during the development of the forebrain and coexpressed in most layer II-V cortical neurons. Brn-1 and Brn-2 appear to critically control the initiation of radial migration, redundantly regulating the cell-autonomous expression of the p35 and p39 regulatory subunits of Cdk5 in migrating cortical neurons, with Brn-1(-/-)/Brn-2(-/-) mice exhibiting cortical inversion.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉McEvilly, Robert J -- de Diaz, Marcela Ortiz -- Schonemann, Marcus D -- Hooshmand, Farideh -- Rosenfeld, Michael G -- New York, N.Y. -- Science. 2002 Feb 22;295(5559):1528-32.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Howard Hughes Medical Institute, Department and School of Medicine, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92037-0648, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11859196" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Brain/cytology/embryology/metabolism ; Cell Adhesion Molecules, Neuronal/genetics/metabolism ; Cell Line ; Cell Movement ; Cerebral Cortex/cytology/embryology/*metabolism ; Cyclin-Dependent Kinase 5 ; Cyclin-Dependent Kinases/metabolism ; Extracellular Matrix Proteins/genetics/metabolism ; Female ; Gene Targeting ; Hippocampus/cytology/embryology/metabolism ; Homeodomain Proteins ; In Situ Hybridization ; Male ; Mice ; Mutation ; Nerve Tissue Proteins/genetics/metabolism ; Neurons/*physiology ; Neuropeptides/genetics/*physiology ; POU Domain Factors ; Serine Endopeptidases ; Trans-Activators/genetics/*physiology ; Transcription Factors/genetics/*physiology ; *Transcription, Genetic
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  • 87
    Publication Date: 2002-09-07
    Description: Distal limb development and specification of digit identities in tetrapods are under the control of a mesenchymal organizer called the polarizing region. Sonic Hedgehog (SHH) is the morphogenetic signal produced by the polarizing region in the posterior limb bud. Ectopic anterior SHH signaling induces digit duplications and has been suspected as a major cause underlying congenital malformations that result in digit polydactyly. Here, we report that the polydactyly of Gli3-deficient mice arises independently of SHH signaling. Disruption of one or both Gli3 alleles in mouse embryos lacking Shh progressively restores limb distal development and digit formation. Our genetic analysis indicates that SHH signaling counteracts GLI3-mediated repression of key regulator genes, cell survival, and distal progression of limb bud development.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉te Welscher, Pascal -- Zuniga, Aimee -- Kuijper, Sanne -- Drenth, Thijs -- Goedemans, Hans J -- Meijlink, Frits -- Zeller, Rolf -- New York, N.Y. -- Science. 2002 Oct 25;298(5594):827-30. Epub 2002 Sep 5.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Developmental Biology, Faculty of Biology, Utrecht University, Padualaan 8, NL-3584 CH Utrecht, Netherlands.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12215652" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Basic Helix-Loop-Helix Transcription Factors ; Cell Death ; DNA-Binding Proteins/genetics/*physiology ; Extremities/*embryology ; Fibroblast Growth Factors/genetics/metabolism ; Gene Expression Regulation, Developmental ; Genes, Homeobox ; Hedgehog Proteins ; Homeodomain Proteins/genetics/metabolism ; *Intercellular Signaling Peptides and Proteins ; Kruppel-Like Transcription Factors ; Limb Buds/cytology/embryology/metabolism ; Membrane Proteins/genetics/metabolism ; Mice ; Mutation ; *Nerve Tissue Proteins ; Oncogene Proteins/genetics/metabolism ; Polydactyly/genetics ; Proteins/genetics/physiology ; Receptors, Cell Surface ; Signal Transduction ; Trans-Activators/genetics/*physiology ; Transcription Factors/genetics/metabolism/*physiology ; Zebrafish Proteins
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  • 88
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-06-29
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Kaiser, Jocelyn -- New York, N.Y. -- Science. 2002 Jun 28;296(5577):2316.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12089417" target="_blank"〉PubMed〈/a〉
    Keywords: Australia ; Financing, Government ; Foreign Professional Personnel/*legislation & jurisprudence ; *International Cooperation ; National Institutes of Health (U.S.)/*legislation & jurisprudence ; *Patents as Topic ; Public Policy ; Research Support as Topic ; United States
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  • 89
    Publication Date: 2002-05-25
    Description: The dynamics of conformational isomerization are explored in a methyl-capped dipeptide, N-acetyl-tryptophan methyl amide (NATMA), using infrared-ultraviolet (IR-UV) hole-filling and IR-induced population transfer spectroscopies. IR radiation selectively excites individual NH stretch vibrational fundamentals of single conformations of the molecule in the early portions of a gas-phase expansion, and then this excited population is collisionally recooled into its conformational minima for subsequent conformation-specific detection. Efficient isomerization is induced by the IR excitation that redistributes population between the same conformations that have population in the absence of IR excitation. The quantum yields for transfer of the population into the various conformational minima depend uniquely on which conformation is excited and on which NH stretch vibration is excited within a given conformation.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Dian, Brian C -- Longarte, Asier -- Zwier, Timothy S -- New York, N.Y. -- Science. 2002 Jun 28;296(5577):2369-73. Epub 2002 May 23.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Chemistry, Purdue University, West Lafayette, IN 47907-1393, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12029064" target="_blank"〉PubMed〈/a〉
    Keywords: Chemistry, Physical ; Dipeptides/*chemistry ; Hydrogen Bonding ; Infrared Rays ; Isomerism ; *Lasers ; Molecular Conformation ; Physicochemical Phenomena ; *Protein Conformation ; Spectrum Analysis ; Temperature ; Thermodynamics ; Tryptophan/*analogs & derivatives/*chemistry ; Ultraviolet Rays ; Vibration
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  • 90
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-01-19
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Lawler, Andrew -- New York, N.Y. -- Science. 2002 Jan 18;295(5554):435.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11799222" target="_blank"〉PubMed〈/a〉
    Keywords: Academies and Institutes/economics/*organization & administration ; Aerospace Medicine/economics/*organization & administration ; *Astronauts ; Budgets ; History, 21st Century ; Humans ; Research ; Research Support as Topic ; *Space Flight ; United States ; United States National Aeronautics and Space Administration/economics
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  • 91
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-12-21
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉New York, N.Y. -- Science. 2002 Dec 20;298(5602):2297-303.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12493876" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Astronomical Phenomena ; Astronomy ; Biological Evolution ; Cosmic Radiation ; Elementary Particles ; Genome ; Hominidae ; Humans ; Ion Channels/physiology ; Lasers ; Light ; Microwaves ; Motion Pictures as Topic ; Optics and Photonics ; Retinal Ganglion Cells/physiology ; Rod Opsins/physiology ; *Science ; Sequence Analysis, DNA ; Temperature ; Tomography/methods
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  • 92
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-11-02
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Pennisi, Elizabeth -- New York, N.Y. -- Science. 2002 Nov 1;298(5595):953-5.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12411686" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; *Biological Evolution ; Butterflies/anatomy & histology/genetics/growth & development ; Caenorhabditis/anatomy & histology/genetics/physiology ; Cell Lineage ; *Developmental Biology ; Eye/anatomy & histology ; Female ; Fishes/anatomy & histology/genetics/growth & development ; *Genes ; Genes, Insect ; *Genetic Variation ; Male ; Mutation ; Selection, Genetic ; Sex Determination Processes ; Species Specificity ; Stomatognathic System/anatomy & histology
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  • 93
    Publication Date: 2002-12-14
    Description: In a decade-long soil warming experiment in a mid-latitude hardwood forest, we documented changes in soil carbon and nitrogen cycling in order to investigate the consequences of these changes for the climate system. Here we show that whereas soil warming accelerates soil organic matter decay and carbon dioxide fluxes to the atmosphere, this response is small and short-lived for a mid-latitude forest, because of the limited size of the labile soil carbon pool. We also show that warming increases the availability of mineral nitrogen to plants. Because plant growth in many mid-latitude forests is nitrogen-limited, warming has the potential to indirectly stimulate enough carbon storage in plants to at least compensate for the carbon losses from soils. Our results challenge assumptions made in some climate models that lead to projections of large long-term releases of soil carbon in response to warming of forest ecosystems.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Melillo, J M -- Steudler, P A -- Aber, J D -- Newkirk, K -- Lux, H -- Bowles, F P -- Catricala, C -- Magill, A -- Ahrens, T -- Morrisseau, S -- New York, N.Y. -- Science. 2002 Dec 13;298(5601):2173-6.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉The Ecosystems Center, Marine Biological Laboratory, Woods Hole, MA 02543, USA. jmelillo@mbl.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12481133" target="_blank"〉PubMed〈/a〉
    Keywords: Biodegradation, Environmental ; Carbon/*metabolism ; Carbon Dioxide/metabolism ; *Climate ; *Ecosystem ; Fertilizers ; Massachusetts ; Nitrogen/metabolism ; Plants/*metabolism ; *Soil ; Temperature ; *Trees/metabolism
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  • 94
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-04-20
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Kaiser, Jocelyn -- New York, N.Y. -- Science. 2002 Apr 19;296(5567):452-3.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11964453" target="_blank"〉PubMed〈/a〉
    Keywords: Centers for Disease Control and Prevention (U.S.) ; Chronic Disease/*epidemiology ; Databases, Factual ; *Environmental Health ; Financing, Government ; Humans ; *Life Style ; *Population Surveillance ; *Registries ; Research Support as Topic ; United States/epidemiology
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  • 95
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-03-02
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Brown, Kathryn -- New York, N.Y. -- Science. 2002 Mar 1;295(5560):1634-5.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11872820" target="_blank"〉PubMed〈/a〉
    Keywords: *Commerce ; DNA/genetics ; DNA, Mitochondrial/genetics ; Databases, Nucleic Acid ; Entrepreneurship ; Female ; Genetic Markers ; *Genetics, Medical ; *Genetics, Population ; Haplotypes ; Humans ; Male ; Microsatellite Repeats ; Mutation ; *Pedigree ; Y Chromosome
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  • 96
    Publication Date: 2002-02-16
    Description: Deep-sea hydrothermal vents and cold seeps are submarine springs where nutrient-rich fluids emanate from the sea floor. Vent and seep ecosystems occur in a variety of geological settings throughout the global ocean and support food webs based on chemoautotrophic primary production. Most vent and seep invertebrates arrive at suitable habitats as larvae dispersed by deep-ocean currents. The recent evolution of many vent and seep invertebrate species (〈100 million years ago) suggests that Cenozoic tectonic history and oceanic circulation patterns have been important in defining contemporary biogeographic patterns.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Van Dover, C L -- German, C R -- Speer, K G -- Parson, L M -- Vrijenhoek, R C -- New York, N.Y. -- Science. 2002 Feb 15;295(5558):1253-7.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Biology Department, College of William and Mary, Williamsburg, VA 23187, USA. cindy_vandover@wm.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11847331" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; *Biological Evolution ; *Ecosystem ; Environment ; Food Chain ; Genetics, Population ; Geography ; Geologic Sediments ; *Invertebrates/classification/genetics/physiology ; Oceans and Seas ; Oxidation-Reduction ; Phylogeny ; *Seawater ; Temperature
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  • 97
    Publication Date: 2002-09-07
    Description: The higher-order assembly of chromatin imposes structural organization on the genetic information of eukaryotes and is thought to be largely determined by posttranslational modification of histone tails. Here, we study a 20-kilobase silent domain at the mating-type region of fission yeast as a model for heterochromatin formation. We find that, although histone H3 methylated at lysine 9 (H3 Lys9) directly recruits heterochromatin protein Swi6/HP1, the critical determinant for H3 Lys9 methylation to spread in cis and to be inherited through mitosis and meiosis is Swi6 itself. We demonstrate that a centromere-homologous repeat (cenH) present at the silent mating-type region is sufficient for heterochromatin formation at an ectopic site, and that its repressive capacity is mediated by components of the RNA interference (RNAi) machinery. Moreover, cenH and the RNAi machinery cooperate to nucleate heterochromatin assembly at the endogenous mat locus but are dispensable for its subsequent inheritance. This work defines sequential requirements for the initiation and propagation of regional heterochromatic domains.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Hall, Ira M -- Shankaranarayana, Gurumurthy D -- Noma, Ken-Ichi -- Ayoub, Nabieh -- Cohen, Amikam -- Grewal, Shiv I S -- GM59772/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 2002 Sep 27;297(5590):2232-7. Epub 2002 Sep 5.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Cold Spring Harbor Laboratory, Post Office Box 100, Cold Spring Harbor, NY 11724, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12215653" target="_blank"〉PubMed〈/a〉
    Keywords: Alleles ; Cell Cycle Proteins/genetics/metabolism ; Centromere ; Chromosomal Proteins, Non-Histone/metabolism ; Crosses, Genetic ; DNA, Fungal/*genetics ; Endoribonucleases/genetics/metabolism ; Enzyme Inhibitors/pharmacology ; *Gene Silencing ; Heterochromatin/*metabolism ; Histone Deacetylase Inhibitors ; Histone Deacetylases/metabolism ; Histones/metabolism ; Hydroxamic Acids/pharmacology ; Methylation ; *Methyltransferases ; Models, Genetic ; Mutation ; RNA Replicase/genetics/metabolism ; RNA, Double-Stranded/genetics/metabolism ; RNA, Fungal/*genetics/metabolism ; RNA, Small Nuclear/genetics/metabolism ; *Repetitive Sequences, Nucleic Acid ; Ribonuclease III ; Schizosaccharomyces/*genetics/metabolism ; Schizosaccharomyces pombe Proteins/genetics/metabolism
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  • 98
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    Unknown
    American Association for the Advancement of Science (AAAS)
    Publication Date: 2002-07-30
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Perez-Iratxeta, Carolina -- Andrade, Miguel A -- New York, N.Y. -- Science. 2002 Jul 26;297(5581):519.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12143877" target="_blank"〉PubMed〈/a〉
    Keywords: *Developed Countries ; *Developing Countries ; *Medline ; *Publishing/trends ; Research Support as Topic
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 99
    Publication Date: 2002-03-23
    Description: Mammalian genetic approaches to study gene function have been hampered by the lack of tools to generate stable loss-of-function phenotypes efficiently. We report here a new vector system, named pSUPER, which directs the synthesis of small interfering RNAs (siRNAs) in mammalian cells. We show that siRNA expression mediated by this vector causes efficient and specific down-regulation of gene expression, resulting in functional inactivation of the targeted genes. Stable expression of siRNAs using this vector mediates persistent suppression of gene expression, allowing the analysis of loss-of-function phenotypes that develop over longer periods of time. Therefore, the pSUPER vector constitutes a new and powerful system to analyze gene function in a variety of mammalian cell types.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Brummelkamp, Thijn R -- Bernards, Rene -- Agami, Reuven -- New York, N.Y. -- Science. 2002 Apr 19;296(5567):550-3. Epub 2002 Mar 21.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Division of Molecular Carcinogenesis, Division of Tumor Biology, The Netherlands Cancer Institute, Plesmanlaan 121, 1066 CX Amsterdam, Netherlands.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11910072" target="_blank"〉PubMed〈/a〉
    Keywords: Anaphase-Promoting Complex-Cyclosome ; Cell Cycle Proteins ; Down-Regulation ; *Gene Silencing ; Genes, p53 ; *Genetic Techniques ; *Genetic Vectors ; Humans ; Ligases/genetics ; Mutation ; Nucleic Acid Conformation ; Phenotype ; Protein Kinases/genetics/metabolism ; Protein-Serine-Threonine Kinases ; Proto-Oncogene Proteins ; RNA, Messenger/chemistry/*genetics/metabolism ; RNA, Small Interfering ; RNA, Untranslated/chemistry/*genetics/metabolism ; Transfection ; Tumor Cells, Cultured ; Tumor Suppressor Protein p53/metabolism ; *Ubiquitin-Protein Ligase Complexes
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 100
    Publication Date: 2002-07-13
    Description: Arabidopsis VRN genes mediate vernalization, the process by which a long period of cold induces a mitotically stable state that leads to accelerated flowering during later development. VRN1 encodes a protein that binds DNA in vitro in a non-sequence-specific manner and functions in stable repression of the major target of the vernalization pathway, the floral repressor FLC. Overexpression of VRN1 reveals a vernalization-independent function for VRN1, mediated predominantly through the floral pathway integrator FT, and demonstrates that VRN1 requires vernalization-specific factors to target FLC.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Levy, Yaron Y -- Mesnage, Stephane -- Mylne, Joshua S -- Gendall, Anthony R -- Dean, Caroline -- New York, N.Y. -- Science. 2002 Jul 12;297(5579):243-6.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Cell and Developmental Biology, John Innes Centre, Colney Lane, Norwich NR4 7UH, UK.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12114624" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Arabidopsis/anatomy & histology/*genetics/growth & development/*physiology ; Arabidopsis Proteins/chemistry/*genetics/metabolism/*physiology ; Base Sequence ; Cloning, Molecular ; DNA, Plant/genetics/metabolism ; DNA-Binding Proteins/chemistry/*genetics/*physiology ; Down-Regulation ; Gene Expression Regulation, Plant ; Genes, Plant ; MADS Domain Proteins/genetics/metabolism ; Molecular Sequence Data ; Mutation ; Photoperiod ; Plant Proteins/genetics/metabolism ; Plant Structures/anatomy & histology/physiology ; Plants, Genetically Modified ; Protein Binding ; Recombinant Fusion Proteins/metabolism ; *Repressor Proteins ; Temperature
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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