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  • Frontiers Media  (14,161)
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  • 2015-2019  (32,259)
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  • 1
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    American Geophysical Union
    In:  EPIC3Earth's Future, American Geophysical Union, 7(12), pp. 1296-1306, ISSN: 2328-4277
    Publication Date: 2021-02-15
    Description: To counteract global warming, a geoengineering approach that aims at intervening in the Arctic ice‐albedo feedback has been proposed. A large number of wind‐driven pumps shall spread seawater on the surface in winter to enhance ice growth, allowing more ice to survive the summer melt. We test this idea with a coupled climate model by modifying the surface exchange processes such that the physical effect of the pumps is simulated. Based on experiments with RCP 8.5 scenario forcing, we find that it is possible to keep the late‐summer sea ice cover at the current extent for the next ∼60 years. The increased ice extent is accompanied by significant Arctic late‐summer cooling by ∼1.3 K on average north of the polar circle (2021–2060). However, this cooling is not conveyed to lower latitudes. Moreover, the Arctic experiences substantial winter warming in regions with active pumps. The global annual‐mean near‐surface air temperature is reduced by only 0.02 K (2021–2060). Our results cast doubt on the potential of sea ice targeted geoengineering to mitigate climate change.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 2
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    American Geophysical Union
    In:  EPIC3AGU Fall meeting, San Francisco, CA, 2019-12-09-2019-12-13USA, American Geophysical Union
    Publication Date: 2019-12-17
    Description: During the last decade the Arctic has experienced increasing human development while many native communities continue to live a subsistence lifestyle. Off-road winter tundra travel for resource exploration is most cost effective and least environmentally damaging during winter when the tundra is frozen and snow covered. Climate warming, which is occurring at an amplified rate in the Arctic, likely changes the period when access to the off-road tundra travel is possible. There currently exists, however, large uncertainty as to how climate change will impact the low-cost winter travel access across the tundra. Here we defined safe tundra access when soil temperatures are below a soil type dependent freezing temperature and snow cover is at least 20 cm. Our analysis is based on the simulated soil temperatures and snow depths of Land Surface Models (LSMs) contributing to “The Inter-Sectoral Impact Model Intercomparison Project” (ISIMIP). ISIMIP simulations are based on a common protocol, the same input data, the same spatial (0.5°) and temporal resolution (daily modeling output), and span over the period 1861-2100. The LSMs are forced by four different bias-corrected global circulation models (IPSL-CM5A-LR, GFDL-ESM2M, MIROC5, HadGEM2-ES) and three different future conditions (represented via representative concentration pathways (RCP) 2.6, 6.0, 8.5). The simulation results of our model ensemble (60 model combinations) show consistent permafrost warming and changing snow cover patterns at 60°N. Annual off-road tundra travel is considerably reduced (〉50%) under future climate change scenarios, especially under the RCP8.5. The main reduction can be observed in the spring and autumn (〉30%). The results of the multi-model ensemble differ in magnitude, however, their overall trend is consistent. Our results suggest a high vulnerability and substantial changes to the (subsistence) livelihoods of native communities and increasing costs for off-road resource exploration.
    Repository Name: EPIC Alfred Wegener Institut
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  • 3
    Publication Date: 2020-02-12
    Description: Climate change and sustainable use of natural capital demand increased collaboration across the sciences. The first steps for effective collaboration often focus on improving interoperability between observation and analyses methodologies. This is traditionally done through a combination of standards and best practices. The ocean observation community and observing infrastructures - with regionally diverse members working in physics, chemistry, biology and engineering - is looking toward a dynamic consensus-building approach to match the rapid pace of technological evolution. This is an essential part of the long-term cooperation among ocean observing infrastructures. In the last 12 months, the ocean observing community has implemented an Ocean Best Practices System (OBPS). This System was recently adopted by the Intergovernmental Ocean Commission as an international project under GOOS and IODE. The System consists of a permanent OBPS repository hosted by IODE with state-of-the-art semantic discovery and metadata indexing for improved access to best practices and, eventually, to the data associated with them. There have been discussions to understand how to deal with differing best practices and standards on the same observation or analyses objective and other issues that arise from a comprehensive ocean best practices system. A recent survey, to be described, offers options on alternative approaches. Further, we have created a forum, in “Frontiers in Marine Science” for discussion of best practices and their applications. This presentation will cover options for evolving and sustaining ocean best practices across infrastructures. The recommendations build upon the community survey, the OGC experience, the outcomes of the OceanObs’19 conference as well as inputs from the Decade for Ocean Sciences community meetings. The extension of this work to other communities will also be examined.
    Repository Name: EPIC Alfred Wegener Institut
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  • 4
    Publication Date: 2020-05-14
    Description: IODP Exp. 383 recovered two Pleistocene sedimentary sequences from the upper continental slope along the southernmost Chilean margin that are well positioned to monitor changes in the Antarctic Circumpolar Current (ACC) upstream of the Drake Passage and the history of Patagonian glaciation. These sites are characterized by high sedimentation rates and a complex distribution of siliciclastic sediments with infrequent decimeter-scale beds of calcareous biogenic sediments. Unravelling ocean circulation and climate history from these sites requires a primary understanding of sedimentary provenance and transport mechanisms derived from a complete lithological characterization of the sequence. Here, we integrate downcore shipboard physical properties with sedimentological observations to fully characterize the sequences, evaluate potential for correlation and constrain regional depositional processes. Site U1542 (52°S; 1101 m water depth) consists of a 249 m spliced sedimentary sequence containing Middle Pleistocene to Holocene sediments. It mainly consists of clayey silt that is often interbedded with thin (~75 cm) beds of calcareous sand-bearing clayey to sandy silt with foraminifera and nannofossils or foraminifera-rich nannofossil ooze. Site U1544 (55°S; 2090 m water depth) consists of a 98 m sedimentary sequence obtained from a single hole. Sediments are also dominated by silty clay, but exhibit slightly thicker beds of calcareous ooze and a significantly higher proportion of cm- to dm-scale sand beds that are interpreted as turbidites. Based on the lithology of the recovered sediments and proximity to a glaciated continental margin, terrigenous sediment is likely delivered to these locations by a combination of ice rafting, glacial meltwater plumes, episodic downslope transport from the outer continental shelf and fine-grained sediments transported by the Cape Horn Current entering the Drake Passage as the northern branch of the ACC.
    Repository Name: EPIC Alfred Wegener Institut
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  • 5
    Publication Date: 2019-03-29
    Description: Pore Pressure Pulse Drove the 2012 Emilia (Italy)Series of EarthquakesGiuseppe Pezzo1, Pasquale De Gori1, Francesco Pio Lucente1, and Claudio Chiarabba11Istituto Nazionale di Geofisica e Vulcanologia, Rome, ItalyAbstractThe 2012 Emilia earthquakes sequence is thefirst debated case in Italy of destructive eventpossibly induced by anthropic activity. During this sequence, two main earthquakes occurred separated by9 days on contiguous thrust faults. Scientific commissions engaged by the Italian government reportedcomplementary scenarios on the potential trigger mechanism ascribable to exploitation of a nearby oilfield.In this study, we combine a refined geodetic source model constrained by precise aftershock locationsand an improved tomographic model of the area to define the geometrical relation between the activatedfaults and investigate possible triggering mechanisms. An aftershock decay rate that deviates from theclassical Omori-like pattern andVp/Vschanges along the fault system suggests that natural pore pressurepulse drove the space-time evolution of seismicity and the activation of the second main shock
    Description: Published
    Description: 682-690
    Description: 4T. Sismicità dell'Italia
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 6
    Publication Date: 2019-03-29
    Description: Near-fault ground motion records often present impulsive signals, characterized by a largeamplitude in the velocity wavefield and by the energy concentrated in a short time window as comparedto the total earthquake duration. Thispulse-likebehavior is ascribed to the directivity of the seismic rupture,and it requires a stronger demand to the buildings not predicted by the classical design spectra. In this workwe investigate the pulse occurrence and duration in near-fault synthetic seismograms generated from anensemble ofk 2source models. We exploited the fault geometry of theMw= 6.3, 2009 L’Aquila earthquake,which represents a typical example of normal-fault earthquake for which several records in the fault vicinityare available for comparison with synthetics. We show that impulsive records are sensitive to the rupturevelocity, to the hypocenter depth, and to the station location, whether it is on the hanging wall or on thefootwall. The pulse duration was also shown to be proportional to the risetime, and it scales with thesource-receiver distance and inversely with the rupture velocity. We model these results as an effectof the coupled along-strike and updip directivity
    Description: Published
    Description: 7707-7721
    Description: 6T. Studi di pericolosità sismica e da maremoto
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 7
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    American Geophysical Union
    In:  EPIC3AGU Fall meeting 2019, San Francisco, CA, 2019-12-09-2019-12-13USA, American Geophysical Union
    Publication Date: 2021-08-16
    Description: Deciduous larch is a weak competitor when growing in mixed stands with evergreen taxa but is dominant in many boreal forest areas of Eastern Siberia. However, it is hypothesized that certain factors such as a shallow active layer thickness and high fire frequency favor larch dominance. Our aim is to understand how thermohydrological interactions between vegetation, permafrost, and atmosphere stabilize the larch forests and the underlying permafrost in Eastern Siberia. A tailored version of a one-dimensional land surface model (CryoGrid) is adapted for the application in vegetated areas and used to reproduce the energy transfer and thermal regime of permafrost ground in typical boreal larch stands. In order to simulate the responds of Arctic trees to local climate and permafrost conditions we have implemented a multilayer canopy parameterization originally developed for the Community Land Model (CLM-ml_v0). The coupled model is capable of calculating the full energy balance above, within and below the canopy including the radiation budget, the turbulent fluxes and the heat budget of the permafrost ground under several forcing scenarios. We will present first results of simulations performed for different study sites in larch-dominated forests of Eastern Siberia and Mongolia under current and future climate conditions. Model performance is thoroughly evaluated based on comprehensive in-situ soil temperature and radiation measurements at our study sites.
    Repository Name: EPIC Alfred Wegener Institut
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  • 8
    Publication Date: 2019-01-07
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Noble gases in deepwater oils of the U.S. Gulf of Mexico. Geochemistry, Geophysics, Geosystems , 19, 4218 – 4235.(2018): doi:10.1029/2018GC007654.
    Description: Hydrocarbon migration and emplacement processes remain underconstrained despite the vast potential economic value associated with oil and gas. Noble gases provide information about hydrocarbon generation, fluid migration pathways, reservoir conditions, and the relative volumes of oil versus water in the subsurface. Produced gas He-Ne-Ar-Kr-Xe data from two distinct oil fields in the Gulf of Mexico (Genesis and Hoover-Diana) are used to calibrate a model that takes into account both water-oil solubility exchange and subsequent gas cap formation. Reconstructed noble gas signatures in oils reflect simple (two-phase) oil-water exchange imparted during migration from the source rock to the trap, which are subsequently modified by gas cap formation at current reservoir conditions. Calculated, oil to water volume ratios (Vo/Vw) in Tertiary-sourced oils from the Hoover-Diana system are 2–3 times greater on average than those in the Jurassic sourced oils from the Genesis reservoirs. Higher Vo/Vw in Hoover-Diana versus Genesis can be interpreted in two ways: either (1) the Hoover reservoir interval has 2–3 times more oil than any of the individual Genesis reservoirs, which is consistent with independent estimates of oil in place for the respective reservoirs, or (2) Genesis oils have experienced longer migration pathways than Hoover-Diana oils and thus have interacted with more water. The ability to determine a robust Vo/Vw , despite gas cap formation and possible gas cap loss, is extremely powerful. For example, when volumetric hydrocarbon ratios are combined with independent estimates of hydrocarbon migration distance and/or formation fluid volumes, this technique has the potential to differentiate between large and small oil accumulations.
    Description: We thank ExxonMobil for funding and providing the samples. In addition, we thank James Scott and two anonymous reviewers for their comprehensive and constructive reviews, as well as Janne Blichert-Toft for editorial handling.
    Description: 2019-04-10
    Repository Name: Woods Hole Open Access Server
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  • 9
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 123(12), (2018): 8674-8687, doi:10.1002/2018JC013766.
    Description: A large collaborative program has studied the coupled air‐ice‐ocean‐wave processes occurring in the Arctic during the autumn ice advance. The program included a field campaign in the western Arctic during the autumn of 2015, with in situ data collection and both aerial and satellite remote sensing. Many of the analyses have focused on using and improving forecast models. Summarizing and synthesizing the results from a series of separate papers, the overall view is of an Arctic shifting to a more seasonal system. The dramatic increase in open water extent and duration in the autumn means that large surface waves and significant surface heat fluxes are now common. When refreezing finally does occur, it is a highly variable process in space and time. Wind and wave events drive episodic advances and retreats of the ice edge, with associated variations in sea ice formation types (e.g., pancakes, nilas). This variability becomes imprinted on the winter ice cover, which in turn affects the melt season the following year.
    Description: This program was supported by the Office of Naval Research, Code 32, under Program Managers Scott Harper and Martin Jeffries. The crew of R/V Sikuliaq provide outstanding support in collecting the field data, and the US National Ice Center, German Aerospace Center (DLR), and European Space Agency facilitated the remote sensing collections and daily analysis products. RADARSAT‐2 Data and Products are from MacDonald, Dettwiler, and Associates Ltd., courtesy of the U.S. National Ice Center. Data, supporting information, and a cruise report can be found at http://www.apl.uw.edu/arcticseastate
    Keywords: Arctic ; waves ; autumn ; sea ice ; Beaufort ; flux
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  • 10
    Publication Date: 2022-05-25
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Frontiers in Microbiology 10 (2019): 115, doi:10.3389/fmicb.2019.00115.
    Description: This Research Topic was supported by the National Key Research and Development Program of China grant 2016YFA0601303, China Ocean Mineral Resources R&D Association grant DY135-E2-1-04, China SOA grant GASI-03-01-02-05, NSFC grants 41676122, 91328209, and 91428308, and CNOOC grant CNOOC-KJ125FZDXM00TJ001-2014.
    Keywords: marine microbiology ; microbial ecology ; biogeochemical cycles ; environmental gradients ; global change ; ocean acidification ; greenhouse gases
    Repository Name: Woods Hole Open Access Server
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  • 11
    Publication Date: 2022-05-25
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Wurch, L. L., Alexander, H., Frischkorn, K. R., Haley, S. T., Gobler, C. J., & Dyhrman, S. T. Transcriptional shifts highlight the role of nutrients in harmful brown tide dynamics. Frontiers in Microbiology, 10, (2019):136, doi:10.3389/fmicb.2019.00136.
    Description: Harmful algal blooms (HABs) threaten ecosystems and human health worldwide. Controlling nitrogen inputs to coastal waters is a common HAB management strategy, as nutrient concentrations often suggest coastal blooms are nitrogen-limited. However, defining best nutrient management practices is a long-standing challenge: in part, because of difficulties in directly tracking the nutritional physiology of harmful species in mixed communities. Using metatranscriptome sequencing and incubation experiments, we addressed this challenge by assaying the in situ physiological ecology of the ecosystem destructive alga, Aureococcus anophagefferens. Here we show that gene markers of phosphorus deficiency were expressed in situ, and modulated by the enrichment of phosphorus, which was consistent with the observed growth rate responses. These data demonstrate the importance of phosphorus in controlling brown-tide dynamics, suggesting that phosphorus, in addition to nitrogen, should be evaluated in the management and mitigation of these blooms. Given that nutrient concentrations alone were suggestive of a nitrogen-limited ecosystem, this study underscores the value of directly assaying harmful algae in situ for the development of management strategies.
    Description: This research was funded by NOAA Grant NA15NOS4780199 (SD), NA09NOA4780206 (SD and CG), and NA15NOS4780183 (CG) through the ECOHAB Program, publication number ECO929. Partial support was also provided by the World Surf League through the Columbia Center for Climate and Life, the Woods Hole Oceanographic Institution Coastal Ocean Institute, and the Link Foundation. Kyle Frischkorn was funded under a National Science Foundation Graduate Research Fellowship.
    Keywords: harmful algal bloom ; Aureococcus anophagefferens ; brown tide ; nutrient physiology ; metatranscriptomics
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  • 12
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published invan der Hoop, J. M., Fahlman, A., Shorter, K. A., Gabaldon, J., Rocho-Levine, J., Petrov, V., & Moore, M. J. Swimming energy economy in bottlenose dolphins under variable drag loading. Frontiers in Marine Science, 5, (2018):465, doi:10.3389/fmars.2018.00465.
    Description: Instrumenting animals with tags contributes additional resistive forces (weight, buoyancy, lift, and drag) that may result in increased energetic costs; however, additional metabolic expense can be moderated by adjusting behavior to maintain power output. We sought to increase hydrodynamic drag for near-surface swimming bottlenose dolphins, to investigate the metabolic effect of instrumentation. In this experiment, we investigate whether (1) metabolic rate increases systematically with hydrodynamic drag loading from tags of different sizes or (2) whether tagged individuals modulate speed, swimming distance, and/or fluking motions under increased drag loading. We detected no significant difference in oxygen consumption rates when four male dolphins performed a repeated swimming task, but measured swimming speeds that were 34% (〉1 m s-1) slower in the highest drag condition. To further investigate this observed response, we incrementally decreased and then increased drag in six loading conditions. When drag was reduced, dolphins increased swimming speed (+1.4 m s-1; +45%) and fluking frequency (+0.28 Hz; +16%). As drag was increased, swimming speed (-0.96 m s-1; -23%) and fluking frequency (-14 Hz; 7%) decreased again. Results from computational fluid dynamics simulations indicate that the experimentally observed changes in swimming speed would have maintained the level of external drag forces experienced by the animals. Together, these results indicate that dolphins may adjust swimming speed to modulate the drag force opposing their motion during swimming, adapting their behavior to maintain a level of energy economy during locomotion.
    Description: Funding for this project was provided by the National Oceanographic Partnership Program (National Science Foundation via the Office of Naval Research N00014-11-1-0113 to MM) and the Office of Naval Research (ONR YIP Award N000141410563 to AF). Dolphin Quest provided in-kind support of animals, crew, and access to resources. JvdH was supported by a Postgraduate Scholarship from the Natural Sciences and Engineering Research Council of Canada.
    Keywords: drag ; swimming efficiency ; adaptive behavior ; tag effect ; biomechanics ; metabolism
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  • 13
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 123(12), (2018): 8887-8901, doi:10.1029/2018JC013797.
    Description: Sea ice is one of the determining parameters of the climate system. The presence of melt ponds on the surface of Arctic sea ice plays a critical role in the mass balance of sea ice. A total of nine cores was collected from multiyear ice refrozen melt ponds and adjacent hummocks during the 2015 Arctic Sea State research cruise. The depth profiles of water isotopes, salinity, and ice texture for these sea ice cores were examined to provide information about the development of refrozen melt ponds and water balance generation processes, which are otherwise difficult to acquire. The presence of meteoric water with low oxygen isotope values as relatively thin layers indicates melt pond water stability and little mixing during formation and refreezing. The hydrochemical characteristics of refrozen melt pond and seawater depth profiles indicate little snowmelt enters the upper ocean during melt pond refreezing. Due to the seasonal characters of deuterium excess for Arctic precipitation, water balance calculations utilizing two isotopic tracers (oxygen isotope and deuterium excess) suggest that besides the melt of snow cover, the precipitation input in the melt season may also play a role in the evolution of melt ponds. The dual‐isotope mixing model developed here may become more valuable in a future scenario of increasing Arctic precipitation. The layers of meteoric origin were found at different depths in the refrozen melt pond ice cores. Surface topography information collected at several core sites was examined for possible explanations of different structures of refrozen melt ponds.
    Description: The coauthors (S. F. A., S. S., T. M., and B. W.) wish to thank the other DRI participants and the Captain and crew of the Sikuliaq's October 2015 cruise for their assistance in the sample collections analyzed in the paper. Jim Thomson (Chief Scientist), Scott Harper (ONR Program Manager), and Martin Jeffries (ONR Program Manager) are particularly acknowledged for their unwavering assistance and leadership during the 5 years of the SeaState DRI. We thank Guy Williams for production of the aerial photo mosaic. Funding from the Office of Naval Research N00014‐13‐1‐0435 (S. F. A. and B. W.), N00014‐13‐1‐0434 (S. S.), and N00014‐13‐1‐0446 (T. M.) supported this research through grants to UTSA, UColorado, and WHOI, respectively. This project was also funded (in part) by the University of Texas at San Antonio, Office of the Vice President for Research (Y. G. and S. F. A.). Data for the stable isotope mixing models used in this study are shown in supporting information Tables S1–S3.
    Description: 2019-05-15
    Keywords: Arctic ; sea ice ; isotope tracer ; melt pond ; oxygen isotope ; deuterium excess
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  • 14
    Publication Date: 2022-05-25
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Battefeld, A., Popovic, M. A., van der Werf, D., & Kole, M. H. P. (2019). A versatile and open-source rapid LED switching system for one-photon imaging and photo-activation. Frontiers in Cellular Neuroscience, 12, (2019): 530. doi:10.3389/fncel.2018.00530.
    Description: Combining fluorescence and transmitted light sources for microscopy is an invaluable method in cellular neuroscience to probe the molecular and cellular mechanisms of cells. This approach enables the targeted recording from fluorescent reporter protein expressing neurons or glial cells in brain slices and fluorescence-assisted electrophysiological recordings from subcellular structures. However, the existing tools to mix multiple light sources in one-photon microscopy are limited. Here, we present the development of several microcontroller devices that provide temporal and intensity control of light emitting diodes (LEDs) for computer controlled microscopy illumination. We interfaced one microcontroller with μManager for rapid and dynamic overlay of transmitted and fluorescent images. Moreover, on the basis of this illumination system we implemented an electronic circuit to combine two pulsed LED light sources for fast (up to 1 kHz) ratiometric calcium (Ca2+) imaging. This microcontroller enabled the calibration of intracellular Ca2+ concentration and furthermore the combination of Ca2+ imaging with optogenetic activation. The devices are based on affordable components and open-source hardware and software. Integration into existing bright-field microscope systems will take ∼1 day. The microcontroller based LED imaging substantially advances conventional illumination methods by limiting light exposure and adding versatility and speed.
    Description: This work was supported by grants to MK: European Research Council (FP7/2007-2013)/ERC grant agreement P261114, National Multiple Sclerosis Society grant (RG 4924A1/1) and a NWO-Vici grant 865.17.003. AB received a Grass Fellowship from the Grass Foundation.
    Keywords: Arduino ; µ Manager ; microscopy ; LED ; high-speed imaging ; Propeller ; calcium imaging
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  • 15
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Freymond, C. V., Lupker, M., Peterse, F., Haghipour, N., Wacker, L., Filip, F., et al. (2018). Constraining instantaneous fluxes and integrated compositions of fluvially discharged organic matter. Geochemistry, Geophysics, Geosystems, 19, 2453 2462. doi: 10.1029/2018GC007539.
    Description: Fluvial export of organic carbon (OC) and burial in ocean sediments comprises an important carbon sink, but fluxes remain poorly constrained, particularly for specific organic components. Here OC and lipid biomarker contents and isotopic characteristics of suspended matter determined in depth profiles across an active channel close to the terminus of the Danube River are used to constrain instantaneous OC and biomarker fluxes and integrated compositions during high to moderate discharges. During high (moderate) discharge, the total Danube exports 8 (7) kg/s OC, 7 (3) g/s higher plant‐derived long‐chain fatty acids (LCFA), 34 (21) g/s short‐chain fatty acids (SCFA), and 0.5 (0.2) g/s soil bacterial membrane lipids (brGDGTs). Integrated stable carbon isotopic compositions were TOC: −28.0 (−27.6)‰, LCFA: −33.5 (−32.8)‰ and Δ14C TOC: −129 (−38)‰, LCFA: −134 (−143)‰, respectively. Such estimates will aid in establishing quantitative links between production, export, and burial of OC from the terrestrial biosphere.
    Description: This project was funded by the Swiss National Science Foundation SNF. Grant Number: 200021_140850. F.P. acknowledges funding from NWO‐VENI grant 863.13.016. We thank the sampling crews from both field campaigns (Björn Buggle, James Saenz, Alissa Zuijdgeest, Marilu Tavagna, Stefan Eugen Filip, Silvia Lavinia Filip, Mihai, Clayton Magill, Thomas Blattmann, and Michael Albani), Daniel Montluçon for lab support and Hannah Gies for PCGC work. Figures, tables, and equations can be found in supporting information.
    Keywords: Danube River ; organic carbon ; biomarker ; radiocarbon ; ADCP
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  • 16
    Publication Date: 2022-05-25
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Torres-Beltran, M., Mueller, A., Scofield, M., Pachiadaki, M. G., Taylor, C., Tyshchenko, K., Michiels, C., Lam, P., Ulloa, O., Jurgens, K., Hyun, J., Edgcomb, V. P., Crowe, S. A., & Hallam, S. J. Sampling and processing methods impact microbial community structure and potential activity in a seasonally anoxic fjord: Saanich Inlet, British Columbia. Frontiers in Marine Science, 6,(2019):132, doi:10.3389/fmars.2019.00132.
    Description: The Scientific Committee on Oceanographic Research (SCOR) Working Group 144 Microbial Community Responses to Ocean Deoxygenation workshop held in Vancouver, B.C on July 2014 had the primary objective of initiating a process to standardize operating procedures for compatible process rate and multi-omic (DNA, RNA, protein, and metabolite) data collection in marine oxygen minimum zones and other oxygen depleted waters. Workshop attendees participated in practical sampling and experimental activities in Saanich Inlet, British Columbia, a seasonally anoxic fjord. Experiments were designed to compare and cross-calibrate in situ versus bottle sampling methods to determine effects on microbial community structure and potential activity when using different filter combinations, filtration methods, and sample volumes. Resulting biomass was preserved for small subunit ribosomal RNA (SSU or 16S rRNA) and SSU rRNA gene (rDNA) amplicon sequencing followed by downstream statistical and visual analyses. Results from these analyses showed that significant community shifts occurred between in situ versus on ship processed samples. For example, Bacteroidetes, Alphaproteobacteria, and Opisthokonta associated with on-ship filtration onto 0.4 μm filters increased fivefold compared to on-ship in-line 0.22 μm filters or 0.4 μm filters processed and preserved in situ. In contrast, Planctomycetes associated with 0.4 μm in situ filters increased fivefold compared to on-ship filtration onto 0.4 μm filters and on-ship in-line 0.22 μm filters. In addition, candidate divisions and Chloroflexi were primarily recovered when filtered onto 0.4 μm filters in situ. Results based on rRNA:rDNA ratios for microbial indicator groups revealed previously unrecognized roles of candidate divisions, Desulfarculales, and Desulfuromandales in sulfur cycling, carbon fixation and fermentation within anoxic basin waters. Taken together, filter size and in situ versus on-ship filtration had the largest impact on recovery of microbial groups with the potential to influence downstream metabolic reconstruction and process rate measurements. These observations highlight the need for establishing standardized and reproducible techniques that facilitate cross-scale comparisons and more accurately assess in situ activities of microbial communities.
    Description: This work was performed under the auspices of the Scientific Committee on Oceanographic Research (SCOR), the United States Department of Energy (DOE) Joint Genome Institute, an Office of Science User Facility, supported by the Office of Science of the United States Department of Energy under Contract DE-AC02- 05CH11231, the G. Unger Vetlesen and Ambrose Monell Foundations, the Tula Foundation-funded Centre for Microbial Diversity and Evolution, the Natural Sciences and Engineering Research Council of Canada, Genome British Columbia, the Canada Foundation for Innovation, and the Canadian Institute for Advanced Research through grants awarded to SH. McLane Research Laboratories and Connie Lovejoy contributed access to instrumentation for field work. Ship time support was provided by NSERC between 2007 and 2014 through grants awarded to SC, SH and Philippe Tortell MT-B was funded by Consejo Nacional de Ciencia y Tecnología (CONACyT) and the Tula Foundation.
    Keywords: microbial ecology ; oxygen minimum zone ; standards of practice ; filtration methods ; amplicon sequencing
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  • 17
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans, 123(11), (2018): 7877-7895. doi: 10.1029/2018JC014290.
    Description: A three‐dimensional, primitive‐equation, ocean circulation model coupled with a Lagrangian particle‐tracking algorithm is used to investigate the dispersal and settlement of planktonic larvae released from discrete hydrothermal habitats on the East Pacific Rise segment at 9–10°N. Model outputs show that mean circulation is anticyclonic around the ridge segment, which consists of a northward flow along the western flank and a southward flow along the eastern flank. Those flank jets are dispersal expressways for the along‐ridge larval transport and strongly affect its overall direction and spatial‐temporal variations. It is evident from model results that the transform faults bounding the ridge segment and off axis topography (the Lamont Seamount Chain) act as topographic barriers to larval dispersal in the along‐ridge direction. Furthermore, the presence of an overlapping spreading center and an adjacent local topographic high impedes the southward along‐ridge larval transport. The model results suggest that larval recolonization within ridge‐crest habitats is enhanced by the anticyclonic circulation around the ridge segment, and the overall recolonization rate is higher for larvae having a short precompetency period and an altitude above the bottom sufficient to avoid influence by the near‐bottom currents Surprisingly, for larvae having a long precompetency period (〉10 days), the prolonged travel time allowed some of those larvae to return to their natal vent clusters, which results in an unexpected increase in connectivity among natal and neighboring sites. Overall, model‐based predictions of connectivity are highly sensitive to the larval precompetency period and vertical position in the water column.
    Description: The sediment‐trap data presented in this paper are included in Table S1. The bathymetric data used in the model can be downloaded from the Global Multi‐Resolution Topography (GMRT) Synthesis of Marine Geoscience Data System (MGDS) (https://www.gmrt.org/GMRTMapTool). The ocean current time series data used in this work were acquired in 2006‐2007 by Andreas Thurnherr at the Earth Institute of Columbia University. Those data can be accessed in the supporting information. D.J. McGillicuddy gratefully acknowledges support from the National Science Foundation and the Holger W. Jannasch and Columbus O'Donnell Iselin Shared Chairs for Excellence in Oceanography. L.S. Mullineaux acknowledges with gratitude support from the National Science Foundation and the Woods Hole Oceanographic Institution (WHOI) Ocean life fellowship. We appreciate the operation support from the Captain and crew of R/V Atlantis and the Alvin submersible group. We are thankful to V.K. Kosnyrev for developing the coupling interface between the ocean‐circulation and particle‐tracking models. We are grateful to J.W. Lavelle for his intellectual support for the modeling work presented in this paper. We thank Houshuo Jiang for sponsoring our use of the cluster computer at WHOI.
    Description: 2019-05-06
    Keywords: larva ; dispersal ; hydrothermal vent ; EPR ; connectivity ; supply
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  • 18
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans, 123(11), (2018): 7983-8003. doi:10.1029/2018JC014298.
    Description: A melt pond (MP) distribution equation has been developed and incorporated into the Marginal Ice‐Zone Modeling and Assimilation System to simulate Arctic MPs and sea ice over 1979–2016. The equation differs from previous MP models and yet benefits from previous studies for MP parameterizations as well as a range of observations for model calibration. Model results show higher magnitude of MP volume per unit ice area and area fraction in most of the Canada Basin and the East Siberian Sea and lower magnitude in the central Arctic. This is consistent with Moderate Resolution Imaging Spectroradiometer observations, evaluated with Measurements of Earth Data for Environmental Analysis (MEDEA) data, and closely related to top ice melt per unit ice area. The model simulates a decrease in the total Arctic sea ice volume and area, owing to a strong increase in bottom and lateral ice melt. The sea ice decline leads to a strong decrease in the total MP volume and area. However, the Arctic‐averaged MP volume per unit ice area and area fraction show weak, statistically insignificant downward trends, which is linked to the fact that MP water drainage per unit ice area is increasing. It is also linked to the fact that MP volume and area decrease relatively faster than ice area. This suggests that overall the actual MP conditions on ice have changed little in the past decades as the ice cover is retreating in response to Arctic warming, thus consistent with the Moderate Resolution Imaging Spectroradiometer observations that show no clear trend in MP area fraction over 2000–2011.
    Description: We gratefully acknowledge the support of the NASA Cryosphere Program (grants NNX15AG68G, NNX17AD27G, and NNX14AH61G), the Office of Naval Research (N00014‐12‐1‐0112), the NSF Office of Polar Programs (PLR‐1416920, PLR‐1603259, PLR‐1602521, and ARC‐1203425), and the Department of Homeland Security (DHS, 2014‐ST‐061‐ML‐0002). The DHS grant is coordinated through the Arctic Domain Awareness Center (ADAC), a DHS Center of Excellence, which conducts maritime research and development for the Arctic region. The views and conclusions in this document are those of the authors and should not be interpreted as representing the official policies, either expressed or implied, of the DHS. MODIS‐derived MP area data are available at https://icdc.cen.uni‐hamburg.de/1/daten/cryosphere/arctic‐meltponds.html. MP area fraction statistics derived from MEDEA images are available from http://psc.apl.uw.edu/melt‐pond‐data/. Sea ice thickness and snow observations are available at http://psc.apl.washington.edu/sea_ice_cdr. CFS forcing data used to drive MIZMAS are available at https://www.ncdc.noaa.gov/data‐access/model‐data/model‐datasets/climate‐forecast‐system‐version2‐cfsv2.
    Description: 2019-04-18
    Keywords: Arctic Ocean ; sea ice ; melt ponds ; numerical modeling ; climate variability
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  • 19
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Benson, A., Brooks, C. M., Canonico, G., Duffy, E., Muller-Karger, F., Sosik, H. M., Miloslavich, P., & Klein, E.. Integrated observations and informatics improve understanding of changing marine ecosystems. Frontiers in Marine Science, 5, (2018):428, doi:10.3389/fmars.2018.00428.
    Description: Marine ecosystems have numerous benefits for human societies around the world and many policy initiatives now seek to maintain the health of these ecosystems. To enable wise decisions, up to date and accurate information on marine species and the state of the environment they live in is required. Moreover, this information needs to be openly accessible to build indicators and conduct timely assessments that decision makers can use. The questions and problems being addressed demand global-scale investigations, transdisciplinary science, and mechanisms to integrate and distribute data that otherwise would appear to be disparate. Essential Ocean Variables (EOVs) and marine Essential Biodiversity Variables (EBVs), conceptualized by the Global Ocean Observing System (GOOS) and the Marine Biodiversity Observation Network (MBON), respectively, guide observation of the ocean. Additionally, significant progress has been made to coordinate efforts between existing programs, such as the GOOS, MBON, and Ocean Biogeographic Information System collaboration agreement. Globally and nationally relevant indicators and assessments require increased sharing of data and analytical methods, sustained long-term and large-scale observations, and resources to dedicated to these tasks. We propose a vision and key tenets as a guiding framework for building a global integrated system for understanding marine biological diversity and processes to address policy and resource management needs. This framework includes: using EOVs and EBVs and implementing the guiding principles of Findable, Accessible, Interoperable, Reusable (FAIR) data and action ecology. In doing so, we can encourage relevant, rapid, and integrative scientific advancement that can be implemented by decision makers to maintain marine ecosystem health.
    Description: We thank T.Malone and A. Knap for the invitation to contribute our ideas to this topic. We also thank the two reviewers and editor for their comments, which strengthened our manuscript.
    Keywords: ocean observing ; integrated assessments ; marine ecosystems ; data sharing ; essential ocean variables ; essential biodiversity variables ; FAIR data ; action ecology
    Repository Name: Woods Hole Open Access Server
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  • 20
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Johnson, M. D., Beaudoin, D. J., Frada, M. J., Brownlee, E. F., & Stoecker, D. K. High grazing rates on cryptophyte algae in Chesapeake Bay. Frontiers in Marine Science, 5, (2018): 241. doi:10.3389/fmars.2018.00241.
    Description: Cryptophyte algae are globally distributed photosynthetic flagellates found in freshwater, estuarine, and neritic ecosystems. While cryptophytes can be highly abundant and are consumed by a wide variety of protistan predators, few studies have sought to quantify in situ grazing rates on their populations. Here we show that autumnal grazing rates on in situ communities of cryptophyte algae in Chesapeake Bay are high throughout the system, while growth rates, particularly in the lower bay, were low. Analysis of the genetic diversity of cryptophyte populations within dilution experiments suggests that microzooplankton may be selectively grazing the fastest-growing members of the population, which were generally Teleaulax spp. We also demonstrate that potential grazing rates of ciliates and dinoflagellates on fluorescently labeled (FL) Rhodomonas salina, Storeatula major, and Teleaulax amphioxeia can be high (up to 149 prey predator−1 d−1), and that a Gyrodinium sp. and Mesodinium rubrum could be selective grazers. Potential grazing was highest for heterotrophic dinoflagellates, but due to its abundance, M. rubrum also had a high overall impact. This study reveals that cryptophyte algae in Chesapeake Bay can experience extremely high grazing pressure from phagotrophic protists, and that this grazing likely shapes their community diversity.
    Description: The authors thank the National Science Foundation (OCE 1031718 and 1436169) for providing support for this research.
    Keywords: cryptophytes ; mixotrophy ; grazing ; Chesapeake Bay ; dinoflagellates ; Mesodinium rubrum
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  • 21
    Publication Date: 2019-11-12
    Description: The Protocol on Environmental Protection of the Antarctic Treaty stipulates that the protection of the Antarctic environment and associated ecosystems be fundamentally considered in the planning and conducting of all activities in the Antarctic Treaty area. One of the key pollutants created by human activities in the Antarctic is noise, which is primarily caused by ship traffic (from tourism, fisheries, and research), but also by geophysical research (e.g., seismic surveys) and by research station support activities (including construction). Arguably, amongst the species most vulnerable to noise are marine mammals since they specialize in using sound for communication, navigation and foraging, and therefore have evolved the highest auditory sensitivity among marine organisms. Reported effects of noise on marine mammals in lower-latitude oceans include stress, behavioral changes such as avoidance, auditory masking, hearing threshold shifts, and—in extreme cases—death. Eight mysticete species, 10 odontocete species, and six pinniped species occur south of 60�S (i.e., in the Southern or Antarctic Ocean). For many of these, the Southern Ocean is a key area for foraging and reproduction. Yet, little is known about how these species are affected by noise. We review the current prevalence of anthropogenic noise and the distribution of marine mammals in the Southern Ocean, and the current research gaps that prevent us from accurately assessing noise impacts on Antarctic marine mammals. A questionnaire given to 29 international experts on marine mammals revealed a variety of research needs. Those that received the highest rankings were (1) improved data on abundance and distribution of Antarctic marine mammals, (2) hearing data for Antarctic marine mammals, in particular a mysticete audiogram, and (3) an assessment of the effectiveness of various noise mitigation options. The management need with the highest score was a refinement of noise exposure criteria. Environmental evaluations are a requirement before conducting activities in the Antarctic. Because of a lack of scientific data on impacts, requirements and noise thresholds often vary between countries that conduct these evaluations, leading to different standards across countries. Addressing the identified research needs will help to implement informed and reasonable thresholds for noise production in the Antarctic and help to protect the Antarctic environment.
    Repository Name: EPIC Alfred Wegener Institut
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  • 22
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    American Geophysical Union
    In:  EPIC3Paleoceanography and Paleoclimatology, American Geophysical Union
    Publication Date: 2020-05-14
    Repository Name: EPIC Alfred Wegener Institut
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  • 23
    Publication Date: 2019-02-19
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Braun, C. D., Skomal, G. B., & Thorrold, S. R. (2018). Integrating archival tag data and a high-resolution oceanographic model to estimate basking shark (Cetorhinus maximus) movements in the western Atlantic. Frontiers in Marine Science, 5, (2018):25, doi:10.3389/fmars.2018.00025.
    Description: Basking shark (Cetorhinus maximus) populations are considered “vulnerable” globally and “endangered” in the northeast Atlantic by the International Union for the Conservation of Nature (IUCN). Much of our knowledge of this species comes from surface observations in coastal waters, yet recent evidence suggests the majority of their lives may be spent in the deep ocean. Depth preferences of basking sharks have significantly limited movement studies that used pop-up satellite archival transmitting (PSAT) tags as conventional light-based geolocation is impossible for tagged animals that spend significant time below the photic zone. We tagged 57 basking sharks with PSAT tags in the NW Atlantic from 2004 to 2011. Many individuals spent several months at meso- and bathy-pelagic depths where accurate light-level geolocation was impossible during fall, winter and spring. We applied a newly-developed geolocation approach for the PSAT data by comparing three-dimensional depth-temperature profile data recorded by the tags to modeled in situ oceanographic data from the high-resolution HYbrid Coordinate Ocean Model (HYCOM). Observation-based likelihoods were leveraged within a state-space hidden Markov model (HMM). The combined tracks revealed that basking sharks moved from waters around Cape Cod, MA to as far as the SE coast of Brazil (20°S), a total distance of over 17,000 km. Moreover, 59% of tagged individuals with sufficient deployment durations (〉250 days) demonstrated seasonal fidelity to Cape Cod and the Gulf of Maine, with one individual returning to within 60 km of its tagging location 1 year later. Tagged sharks spent most of their time at epipelagic depths during summer months around Cape Cod and in the Gulf of Maine. During winter months, sharks spent extended periods at depths of at least 600 m while moving south to the Sargasso Sea, the Caribbean Sea, or the western tropical Atlantic. Our work demonstrates the utility of applying advances in oceanographic modeling to understanding habitat use of highly migratory, often meso- and bathy-pelagic, ocean megafauna. The large-scale movement patterns of tagged sharks highlight the need for international cooperation when designing and implementing conservation strategies to ensure that the species recovers from the historical effects of over-fishing throughout the North Atlantic Ocean.
    Description: We thank B. Galuardi and C. H. Lam for contributing analysis code, and H. Dewar, U. Thygesen and I. Jonsen for valuable feedback on the manuscript. We gratefully acknowledge funding from the US National Science Foundation (OCE 0825148), the National Aeronautics and Space Administration (NNS06AA96G), the Massachusetts Environmental Trust, and the Federal Aid in Sport Fish Restoration Program. Computational support was provided by the AWS Cloud Credits for Research program. CB was funded by the Martin Family Society of Fellows for Sustainability Fellowship at the Massachusetts Institute of Technology, the Grassle Fellowship and Ocean Venture Fund at the Woods Hole Oceanographic Institution, and the NASA Earth and Space Science Fellowship. Funding for the development of HYCOM has been provided by the National Ocean Partnership Program and the Office of Naval Research. Data assimilative products using HYCOM are funded by the U.S. Navy. Computer time for HYCOM was made available by the DoD High Performance Computing Modernization Program.
    Keywords: movement ecology ; satellite archival telemetry ; migration ; mesopelagic ; oceanographic modeling ; site fidelity
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  • 24
    Publication Date: 2019-02-19
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in DeCarlo, T. M., Hen, H., & Farfan, G. A. (2018). The origin and role of organic matrix in coral calcification: Insights from comparing coral skeleton and abiogenic aragonite. Frontiers in Marine Science, 5, (2018): 170. doi:10.3389/fmars.2018.00170.
    Description: Understanding the mechanisms of coral calcification is critical for accurately projecting coral reef futures under ocean acidification and warming. Recent suggestions that calcification is primarily controlled by organic molecules and the biological activity of the coral polyp imply that ocean acidification may not affect skeletal accretion. The basis for these suggestions relies heavily on correlating the presence of organic matter with the orientation and disorder of aragonite crystals in the skeleton, carrying the assumption that organic matter observed in the skeleton was produced by the polyp to control calcification. Here we use Raman spectroscopy to test whether there are differences in organic matter content between coral skeleton and abiogenic aragonites precipitated from seawater, both before and after thermal annealing (heating). We measured the background fluxorescence and intensity of C-H bonding signals in the Raman spectra, which are commonly attributed to coral polyp-derived skeletal organic matrix (SOM) and have been used to map its distribution. Surprisingly, we found no differences in either fluorescence or C-H bonding between abiogenic aragonite and coral skeleton. Annealing reduced the molecular disorder in coral skeleton, potentially due to removal of organic matter, but the same effect was also observed in the abiogenic aragonites. The presence of organic molecules in the abiogenic aragonites is further supported by measurements of N content and δ15N. Together, our data suggest that some of what has been interpreted in previous studies as polyp-derived SOM may actually be seawater-sourced organic matter or some other signal not unique to biogenic aragonite. Finally, we create a high-resolution Raman map of a Pocillopora skeleton to demonstrate how patterns of fluorescence and elevated calcifying fluid aragonite saturation state (ΩAr) along centers of calcification are consistent with both biological and physico-chemical controls. Our aim is to advance discussion on biological mediation of calcification and the implications for coral resilience in a high-CO2 world.
    Description: This study was supported by an ARC Laureate Fellowship (FL120100049) awarded to Professor Malcolm McCulloch and the ARC Centre of Excellence for Coral Reef Studies (CE140100020).
    Keywords: coral ; calcification ; organics ; Raman spectroscopy ; ocean acidification
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  • 25
    Publication Date: 2019-02-19
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Bundy, R. M., Boiteau, R. M., McLean, C., Turk-Kubo, K. A., Mcllvin, M. R., Saito, M. A., Van Mooy, B. A. S., & Repeta, D. J.. Distinct siderophores contribute to iron cycling in the mesopelagic at station ALOHA. Frontiers in Marine Science, 5, (2018): 61. doi:10.3389/fmars.2018.00061.
    Description: The distribution of dissolved iron (Fe), total organic Fe-binding ligands, and siderophores were measured between the surface and 400 m at Station ALOHA, a long term ecological study site in the North Pacific Subtropical Gyre. Dissolved Fe concentrations were low throughout the water column and strong organic Fe-binding ligands exceeded dissolved Fe at all depths; varying from 0.9 nmol L−1 in the surface to 1.6 nmol L−1 below 150 m. Although Fe does not appear to limit microbial production, we nevertheless found siderophores at nearly all depths, indicating some populations of microbes were responding to Fe stress. Ferrioxamine siderophores were most abundant in the upper water column, with concentrations between 0.1 and 2 pmol L−1, while a suite of amphibactins were found below 200 m with concentrations between 0.8 and 11 pmol L−1. The distinct vertical distribution of ferrioxamines and amphibactins may indicate disparate strategies for acquiring Fe from dust in the upper water column and recycled organic matter in the lower water column. Amphibactins were found to have conditional stability constants (log KcondFeL1,Fe′) ranging from 12.0 to 12.5, while ferrioxamines had much stronger conditional stability constants ranging from 14.0 to 14.4, within the range of observed L1 ligands by voltammetry. We used our data to calculate equilibrium Fe speciation at Station ALOHA to compare the relative concentration of inorganic and siderophore complexed Fe. The results indicate that the concentration of Fe bound to siderophores was up to two orders of magnitude higher than inorganic Fe, suggesting that even if less bioavailable, siderophores were nevertheless a viable pathway for Fe acquisition by microbes at our study site. Finally, we observed rapid production of ferrioxamine E by particle-associated bacteria during incubation of freshly collected sinking organic matter. Fe-limitation may therefore be a factor in regulating carbon metabolism and nutrient regeneration in the mesopelagic.
    Description: We thank Chief Scientists Tara Clemente and Sam Wilson for leading the SCOPE Diel cruises. We also thank the Captain and crew of the R/V Ka'imikai-O-Kanaloa, as well as Paul Henderson in the Woods Hole Oceanographic Nutrient Analytical Facility for nutrient analyses. This work was funded by the Woods Hole Oceanographic Postdoctoral Fellowship for RaB, the Simons Foundation (Award 329108), and the National Science Foundation (OCE-1356747). We also thank two reviewers for helpful comments on the manuscript.
    Keywords: iron ; siderophores ; Station ALOHA ; organic ligands ; iron limitation
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  • 26
    Publication Date: 2022-08-31
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geochemistry, Geophysics, Geosystems 19(11), (2018): 4218-4235. doi: 10.1029/2018GC007654
    Description: Hydrocarbon migration and emplacement processes remain underconstrained despite the vast potential economic value associated with oil and gas. Noble gases provide information about hydrocarbon generation, fluid migration pathways, reservoir conditions, and the relative volumes of oil versus water in the subsurface. Produced gas He‐Ne‐Ar‐Kr‐Xe data from two distinct oil fields in the Gulf of Mexico (Genesis and Hoover‐Diana) are used to calibrate a model that takes into account both water‐oil solubility exchange and subsequent gas cap formation. Reconstructed noble gas signatures in oils reflect simple (two‐phase) oil‐water exchange imparted during migration from the source rock to the trap, which are subsequently modified by gas cap formation at current reservoir conditions. Calculated, oil to water volume ratios (Vo/Vw) in Tertiary‐sourced oils from the Hoover‐Diana system are 2–3 times greater on average than those in the Jurassic sourced oils from the Genesis reservoirs. Higher Vo/Vw in Hoover‐Diana versus Genesis can be interpreted in two ways: either (1) the Hoover reservoir interval has 2–3 times more oil than any of the individual Genesis reservoirs, which is consistent with independent estimates of oil in place for the respective reservoirs, or (2) Genesis oils have experienced longer migration pathways than Hoover‐Diana oils and thus have interacted with more water. The ability to determine a robust Vo/Vw, despite gas cap formation and possible gas cap loss, is extremely powerful. For example, when volumetric hydrocarbon ratios are combined with independent estimates of hydrocarbon migration distance and/or formation fluid volumes, this technique has the potential to differentiate between large and small oil accumulations.
    Description: We thank ExxonMobil for funding and providing the samples. In addition, we thank James Scott and two anonymous reviewers for their comprehensive and constructive reviews, as well as Janne Blichert‐Toft for editorial handling.
    Description: 2019-04-10
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  • 27
    Publication Date: 2022-10-27
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geochemistry Geophysics Geosystems 20(5), (2019):2462-2472, doi:10.1029/2019GC008250.
    Description: Methane hydrate occurs naturally under pressure and temperature conditions that are not straightforward to replicate experimentally. Xenon has emerged as an attractive laboratory alternative to methane for studying hydrate formation and dissociation in multiphase systems, given that it forms hydrates under milder conditions. However, building reliable analogies between the two hydrates requires systematic comparisons, which are currently lacking. We address this gap by developing a theoretical and computational model of gas hydrates under equilibrium and nonequilibrium conditions. We first compare equilibrium phase behaviors of the Xe·H2O and CH4·H2O systems by calculating their isobaric phase diagram, and then study the nonequilibrium kinetics of interfacial hydrate growth using a phase field model. Our results show that Xe·H2O is a good experimental analog to CH4·H2O, but there are key differences to consider. In particular, the aqueous solubility of xenon is altered by the presence of hydrate, similar to what is observed for methane; but xenon is consistently less soluble than methane. Xenon hydrate has a wider nonstoichiometry region, which could lead to a thicker hydrate layer at the gas‐liquid interface when grown under similar kinetic forcing conditions. For both systems, our numerical calculations reveal that hydrate nonstoichiometry coupled with hydrate formation dynamics leads to a compositional gradient across the hydrate layer, where the stoichiometric ratio increases from the gas‐facing side to the liquid‐facing side. Our analysis suggests that accurate composition measurements could be used to infer the kinetic history of hydrate formation in natural settings where gas is abundant.
    Description: This work was funded in part by the U.S. Department of Energy, DOE [awards DE‐FE0013999 and DE‐SC0018357 (to R. J.) and DOE Interagency Agreement DE‐FE0023495 (to W. F. W.)]. X. F. acknowledges support by the Miller Research Fellowship at the University of California Berkeley. W. F. W. acknowledges support from the U.S. Geological Survey's Gas Hydrate Project and the Survey's Coastal, Marine Hazards and Resources Program. L. C. F. acknowledges funding from the Spanish Ministry of Economy and Competitiveness (grants RYC‐2012‐11704 and CTM2014‐54312‐P). L. C. F. and R. J. acknowledge funding from the MIT International Science and Technology Initiatives, through a Seed Fund grant. The simulation data are available on the UC Berkeley Dash repository at https://doi.org/10.6078/D1G67B.
    Description: 2019-11-06
    Keywords: Methane hydrates ; Xenon hydrates ; Phase behavior ; Growth kinetics ; Nonstoichiometry
    Repository Name: Woods Hole Open Access Server
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  • 28
    Publication Date: 2022-10-27
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Vance, T. C., Wengren, M., Burger, E., Hernandez, D., Kearns, T., Medina-Lopez, E., Merati, N., O'Brien, K., O'Neil, J., Potemrag, J. T., Signell, R. P., & Wilcox, K. From the oceans to the cloud: Opportunities and challenges for data, models, computation and workflows. Frontiers in Marine Science, 6(211), (2019), doi:10.3389/fmars.2019.00211.
    Description: Advances in ocean observations and models mean increasing flows of data. Integrating observations between disciplines over spatial scales from regional to global presents challenges. Running ocean models and managing the results is computationally demanding. The rise of cloud computing presents an opportunity to rethink traditional approaches. This includes developing shared data processing workflows utilizing common, adaptable software to handle data ingest and storage, and an associated framework to manage and execute downstream modeling. Working in the cloud presents challenges: migration of legacy technologies and processes, cloud-to-cloud interoperability, and the translation of legislative and bureaucratic requirements for “on-premises” systems to the cloud. To respond to the scientific and societal needs of a fit-for-purpose ocean observing system, and to maximize the benefits of more integrated observing, research on utilizing cloud infrastructures for sharing data and models is underway. Cloud platforms and the services/APIs they provide offer new ways for scientists to observe and predict the ocean’s state. High-performance mass storage of observational data, coupled with on-demand computing to run model simulations in close proximity to the data, tools to manage workflows, and a framework to share and collaborate, enables a more flexible and adaptable observation and prediction computing architecture. Model outputs are stored in the cloud and researchers either download subsets for their interest/area or feed them into their own simulations without leaving the cloud. Expanded storage and computing capabilities make it easier to create, analyze, and distribute products derived from long-term datasets. In this paper, we provide an introduction to cloud computing, describe current uses of the cloud for management and analysis of observational data and model results, and describe workflows for running models and streaming observational data. We discuss topics that must be considered when moving to the cloud: costs, security, and organizational limitations on cloud use. Future uses of the cloud via computational sandboxes and the practicalities and considerations of using the cloud to archive data are explored. We also consider the ways in which the human elements of ocean observations are changing – the rise of a generation of researchers whose observations are likely to be made remotely rather than hands on – and how their expectations and needs drive research towards the cloud. In conclusion, visions of a future where cloud computing is ubiquitous are discussed.
    Description: This is PMEL contribution 4873.
    Keywords: Ocean observation ; Ocean modeling and prediction ; Cloud ; Data management ; Archiving ; Technology
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  • 29
    Publication Date: 2022-10-27
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Biogeosciences, 124(6), (2019): 1591-1603, doi:10.1029/2018JG004803.
    Description: Tropical dry forests in eastern and southern Africa cover 2.5 × 106 km2, support wildlife habitat and livelihoods of more than 150 million people, and face threats from land use and climate change. To inform conservation, we need better understanding of ecosystem processes like nutrient cycling that regulate forest productivity and biomass accumulation. Here we report on patterns in nitrogen (N) cycling across a 100‐year forest regrowth chronosequence in the Tanzanian Miombo woodlands. Soil and vegetation indicators showed that low ecosystem N availability for trees persisted across young to mature forests. Ammonium dominated soil mineral N pools from 0‐ to 15‐cm depth. Laboratory‐measured soil N mineralization rates across 3‐ to 40‐year regrowth sites showed no significant trends and were lower than mature forest rates. Aboveground tree N pools increased at 6 to 7 kg N·ha−1·yr−1, accounting for the majority of ecosystem N accumulation. Foliar δ15N 〈0‰ in an N‐fixing canopy tree across all sites suggested that N fixation may contribute to ecosystem N cycle recovery. These results contrast N cycling in wetter tropical and Neotropical dry forests, where indicators of N scarcity diminish after several decades of regrowth. Our findings suggest that minimizing woody biomass removal, litter layer, and topsoil disturbance may be important to promote N cycle recovery and natural regeneration in Miombo woodlands. Higher rates of N mineralization in the wet season indicated a potential that climate change‐altered rainfall leading to extended dry periods may lower N availability through soil moisture‐dependent N mineralization pathways, particularly for mature forests.
    Description: This study depended on the knowledge, insights, and cooperation of many people and institutions. We thank the Millennium Villages Project‐Mbola site for providing introductions to the landscape and village headmen in many regions. We thank the ARI‐Tumbi staff (now TARI‐Tumbi) in Tabora, Tanzania for providing invaluable logistical support in identifying forest regrowth sites and help with labwork in Tabora, Tanzania. We thank other key local organizations, including Tabora Development Foundation Trust (Dick Mlimuka, Oscar Kisanji) and Tanzania Forest Service (Bw. Relingo), for logistical support and transportation. We thank many village headmen and farmers for access to forest sites within their lands for sampling. Finally, we would like to thank the MBL Stable Isotope laboratory and Dr. Marshall Otter for his expertise with producing and interpreting soil and leaf C, N and stable isotope data. This study was funded in part by NSF PIRE Grant OISE 0968211, a Dissertation Support Grant to Marc Mayes from Brown University (2015–2016), and completed with permission and cooperation from the Tanzania Commission on Science and Technology (COSTECH permits 2013‐261‐NA‐2014‐199 and 2015‐183‐ER‐2014‐199). Data and code for analyses can be accessed at a Github repository: https://github.com/mtm17/MiomboN.git.
    Description: 2019-11-08
    Keywords: Nitrogen ; Africa ; Miombo ; Tropical dry forest ; Carbon ; Secondary forest regrowth
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  • 30
    Publication Date: 2022-10-27
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Gewirtzman, J., Tang, J., Melillo, J. M., Werner, W. J., Kurtz, A. C., Fulweiler, R. W., & Carey, J. C. Soil warming accelerates biogeochemical silica cycling in a temperate forest. Frontiers in Plant Science, 10, (2019): 1097, doi:10.3389/fpls.2019.01097.
    Description: Biological cycling of silica plays an important role in terrestrial primary production. Soil warming stemming from climate change can alter the cycling of elements, such as carbon and nitrogen, in forested ecosystems. However, the effects of soil warming on the biogeochemical cycle of silica in forested ecosystems remain unexplored. Here we examine long-term forest silica cycling under ambient and warmed conditions over a 15-year period of experimental soil warming at Harvard Forest (Petersham, MA). Specifically, we measured silica concentrations in organic and mineral soils, and in the foliage and litter of two dominant species (Acer rubrum and Quercus rubra), in a large (30 × 30 m) heated plot and an adjacent control plot (30 × 30 m). In 2016, we also examined effects of heating on dissolved silica in the soil solution, and conducted a litter decomposition experiment using four tree species (Acer rubrum, Quercus rubra, Betula lenta, Tsuga canadensis) to examine effects of warming on the release of biogenic silica (BSi) from plants to soils. We find that tree foliage maintained constant silica concentrations in the control and warmed plots, which, coupled with productivity enhancements under warming, led to an increase in total plant silica uptake. We also find that warming drove an acceleration in the release of silica from decaying litter in three of the four species we examined, and a substantial increase in the silica dissolved in soil solution. However, we observe no changes in soil BSi stocks with warming. Together, our data indicate that warming increases the magnitude of silica uptake by vegetation and accelerates the internal cycling of silica in in temperate forests, with possible, and yet unresolved, effects on the delivery of silica from terrestrial to marine systems.
    Description: This research was supported by the National Science Foundation (NSF PLR-1417763 to JT), the Geological Society of America (Stephen G. Pollock Undergraduate Research Grant to JG), the Institute at Brown for Environment and Society, and the Marine Biological Laboratory. Sample analysis and Fulweiler’s involvement were supported by Boston University and a Bullard Fellowship from Harvard University. The soil warming experiment was supported by the National Science Foundation (DEB-0620443) and Department of Energy (DE-FC02-06-ER641577 and DE-SC0005421).
    Keywords: Silica ; Climate change ; Soil ; Warming ; Phytoliths ; Plants ; Biogeochemistry
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  • 31
    Publication Date: 2022-05-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Newman, L., Heil, P., Trebilco, R., Katsumata, K., Constable, A., van Wijk, E., Assmann, K., Beja, J., Bricher, P., Colemans, R., Costa, D., Diggs, S., Farneti, R., Fawcett, S., Gille, S. T., Hendry, K. R., Henley, S., Hofmann, E., Maksym, T., MazIoff, M., Meijers, A., Meredith, M. M., Moreau, S., Ozsor, B., Robertson, R., Schloss, I., Schofield, O., Shi, J., Sikes, E., Smith, I. J., Swart, S., Wahlin, A., Williams, G., Williams, M. J. M., Herraiz-Borreguero, L., Kern, S., Liesers, J., Massom, R. A., Melbourne-Thomas, J., Miloslavich, P., & Spreen, G. Delivering sustained, coordinated, and integrated observations of the Southern Ocean for global impact. Frontiers in Marine Science, 6, (2019): 433, doi:10.3389/fmars.2019.00433.
    Description: The Southern Ocean is disproportionately important in its effect on the Earth system, impacting climatic, biogeochemical, and ecological systems, which makes recent observed changes to this system cause for global concern. The enhanced understanding and improvements in predictive skill needed for understanding and projecting future states of the Southern Ocean require sustained observations. Over the last decade, the Southern Ocean Observing System (SOOS) has established networks for enhancing regional coordination and research community groups to advance development of observing system capabilities. These networks support delivery of the SOOS 20-year vision, which is to develop a circumpolar system that ensures time series of key variables, and delivers the greatest impact from data to all key end-users. Although the Southern Ocean remains one of the least-observed ocean regions, enhanced international coordination and advances in autonomous platforms have resulted in progress toward sustained observations of this region. Since 2009, the Southern Ocean community has deployed over 5700 observational platforms south of 40°S. Large-scale, multi-year or sustained, multidisciplinary efforts have been supported and are now delivering observations of essential variables at space and time scales that enable assessment of changes being observed in Southern Ocean systems. The improved observational coverage, however, is predominantly for the open ocean, encompasses the summer, consists of primarily physical oceanographic variables, and covers surface to 2000 m. Significant gaps remain in observations of the ice-impacted ocean, the sea ice, depths 〉2000 m, the air-ocean-ice interface, biogeochemical and biological variables, and for seasons other than summer. Addressing these data gaps in a sustained way requires parallel advances in coordination networks, cyberinfrastructure and data management tools, observational platform and sensor technology, two-way platform interrogation and data-transmission technologies, modeling frameworks, intercalibration experiments, and development of internationally agreed sampling standards and requirements of key variables. This paper presents a community statement on the major scientific and observational progress of the last decade, and importantly, an assessment of key priorities for the coming decade, toward achieving the SOOS vision and delivering essential data to all end-users.
    Description: PH was supported by the Australian Government’s Cooperative Research Centers Program through the Antarctica Climate and Ecosystems Cooperative Research Centre, and the International Space Science Institute’s team grant #406. This work contributes to the Australian Antarctica Science projects 4301 and 4390.
    Keywords: Southern Ocean ; observations ; modeling ; ocean–climate interactions ; ecosystem-based management ; long-term monitoring ; international coordination
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  • 32
    Publication Date: 2022-05-26
    Description: The cumulative Greenland freshwater flux anomaly has exceeded 5,000 km3 since the 1990s. The volume of this surplus freshwater is expected to cause substantial freshening in the North Atlantic. Analysis of hydrographic observations in the subpolar seas reveals freshening signals in the 2010s. The sources of this freshening are yet to be determined. In this study, the relationship between the surplus Greenland freshwater flux and this freshening is tested by analyzing the propagation of the Greenland freshwater anomaly and its impact on salinity in the subpolar North Atlantic based on observational data and numerical experiments with and without the Greenland runoff. A passive tracer is continuously released during the simulations at freshwater sources along the coast of Greenland to track the Greenland freshwater anomaly. Tracer budget analysis shows that 44% of the volume of the Greenland freshwater anomaly is retained in the subpolar North Atlantic by the end of the simulation. This volume is sufficient to cause strong freshening in the subpolar seas if it stays in the upper 50–100 m. However, in the model the anomaly is mixed down to several hundred meters of the water column resulting in smaller magnitudes of freshening compared to the observations. Therefore, the simulations suggest that the accelerated Greenland melting would not be sufficient to cause the observed freshening in the subpolar seas and other sources of freshwater have contributed to the freshening. Impacts on salinity in the subpolar seas of the freshwater transport through Fram Strait and precipitation are discussed.
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Dukhovskoy, D. S., Yashayaev, I., Proshutinsky, A., Bamber, J. L., Bashmachnikov, I. L., Chassignet, E. P., Lee, C. M., & Tedstone, A. J. Role of Greenland freshwater anomaly in the recent freshening of the subpolar North Atlantic. Journal of Geophysical Research-Oceans, 124(5), (2019): 3333-3360, doi:10.1029/2018JC014686.
    Keywords: Greenland ice sheet melting ; freshwater anomaly ; subpolar North Atlantic ; subpolar gyre ; passive tracer numerical experiment ; freshwater budget
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  • 33
    Publication Date: 2022-05-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(7), (2019): 4416-4432, doi: 10.1029/2019JC015185.
    Description: Synoptic and historical shipboard data, spanning the period 1981–2017, are used to investigate the seasonal evolution of water masses on the northeastern Chukchi shelf and quantify the circulation patterns and their impact on nutrient distributions. We find that Alaskan coastal water extends to Barrow Canyon along the coastal pathway, with peak presence in September, while the Pacific Winter Water (WW) continually drains off the shelf through the summer. The depth‐averaged circulation under light winds is characterized by a strong Alaskan Coastal Current (ACC) and northward flow through Central Channel. A portion of the Central Channel flow recirculates anticyclonically to join the ACC, while the remainder progresses northeastward to Hanna Shoal where it bifurcates around both sides of the shoal. All of the branches converge southeast of the shoal and eventually join the ACC. The wind‐forced response has two regimes: In the coastal region the circulation depends on wind direction, while on the interior shelf the circulation is sensitive to wind stress curl. In the most common wind‐forced state—northeasterly winds and anticyclonic wind stress curl—the ACC reverses, the Central Channel flow penetrates farther north, and there is mass exchange between the interior and coastal regions. In September and October, the region southeast of Hanna Shoal is characterized by elevated amounts of WW, a shallower pycnocline, and higher concentrations of nitrate. Sustained late‐season phytoplankton growth spurred by this pooling of nutrients could result in enhanced vertical export of carbon to the seafloor, contributing to the maintenance of benthic hotspots in this region.
    Description: The authors acknowledge the hard work and dedication of the many crew members who sailed on the different cruises of the USCGC Healy and the R/V Palmer. This study would not have been possible without their ongoing efforts to carry out successful science operations. Seth Danielson performed the quality control of the Barrow wind data. Funding was provided by the following sources: National Oceanic and Atmospheric Administration (NOAA) Grant NA14‐OAR4320158 (P. L., R. P., and L. M.), National Science Foundation (NSF) Grants OPP‐1702371 and OPP‐1733564 (R. P. and F. B.) and PLR‐1303617 (R. P., K. A., and K. L.), NSF Graduate Research Fellowship Program DGE‐0645962 (K. L.), National Aeronautics and Space Administration award NNX10AF42G (R. P., K. A., and K. L.), and NOAA's Ocean Observing and Monitoring Division, Climate Program Office Fund 100007298 (C. M.). This publication is partially funded by the Joint Institute for the Study of the Atmosphere and Ocean (JISAO) under NOAA Cooperative Agreement NA15OAR4320063 and is contribution EcoFOCI‐0924 to the Ecosystems and Fisheries‐Oceanography Coordinated Investigations, 4944 to PMEL. The CTD and shipboard ADCP data of the eight cruises are available from http://www.rvdata.us/, and the nutrients data can be accessed from https://arcticdata.io/.
    Description: 2019-12-07
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  • 34
    Publication Date: 2022-10-27
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(6), (2019): 3490-3507, doi:10.1029/2018JC014675.
    Description: Offshore permafrost plays a role in the global climate system, but observations of permafrost thickness, state, and composition are limited to specific regions. The current global permafrost map shows potential offshore permafrost distribution based on bathymetry and global sea level rise. As a first‐order estimate, we employ a heat transfer model to calculate the subsurface temperature field. Our model uses dynamic upper boundary conditions that synthesize Earth System Model air temperature, ice mass distribution and thickness, and global sea level reconstruction and applies globally distributed geothermal heat flux as a lower boundary condition. Sea level reconstruction accounts for differences between marine and terrestrial sedimentation history. Sediment composition and pore water salinity are integrated in the model. Model runs for 450 ka for cross‐shelf transects were used to initialize the model for circumarctic modeling for the past 50 ka. Preindustrial submarine permafrost (i.e., cryotic sediment), modeled at 12.5‐km spatial resolution, lies beneath almost 2.5 ×106km2 of the Arctic shelf. Our simple modeling approach results in estimates of distribution of cryotic sediment that are similar to the current global map and recent seismically delineated permafrost distributions for the Beaufort and Kara seas, suggesting that sea level is a first‐order determinant for submarine permafrost distribution. Ice content and sediment thermal conductivity are also important for determining rates of permafrost thickness change. The model provides a consistent circumarctic approach to map submarine permafrost and to estimate the dynamics of permafrost in the past.
    Description: Boundary condition data are available online via the sources referenced in the manuscript. This work was partially funded by a Helmholtz Association of Research Centres (HGF) Joint Russian‐German Research Group (HGF JRG 100). This study is part of a project that has received funding from the European Unions Horizon 2020 research and innovation program under grant agreement 773421. Submarine permafrost studies in the Kara and Laptev Seas were supported by Russian Foundation for Basic Research (RFBR/RFFI) grants 18‐05‐60004 and 18‐05‐70091, respectively. The International Permafrost Association (IPA) and the Association for Polar Early Career Scientists (APECS) supported research coordination that led to this study. We acknowledge coordination support of the World Climate Research Programme (WCRP) through their core project on Climate and Cryosphere (CliC). Thanks to Martin Jakobsson for providing a digitized version of the preliminary IHO delineation of the Arctic seas and to Guy Masters for access to the observational geothermal database. Any use of trade, firm, or product names is for descriptive purposes only and does not imply endorsement by the U.S. Government.
    Description: 2019-10-17
    Keywords: Submarine permafrost ; Arctic ; Cryosphere ; Sea level
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  • 35
    Publication Date: 2022-10-27
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Fiore-Donno, A. M., Richter-Heitmann, T., Degrune, F., Dumack, K., Regan, K. M., Marhan, S., Boeddinghaus, R. S., Rillig, M. C., Friedrich, M. W., Kandeler, E., & Bonkowski, M. Functional traits and spatio-temporal structure of a major group of soil protists (Rhizaria: Cercozoa) in a temperate grassland. Frontiers in Microbiology, 10, (2019): 1332, doi:10.3389/fmicb.2019.01332.
    Description: Soil protists are increasingly appreciated as essential components of soil foodwebs; however, there is a dearth of information on the factors structuring their communities. Here we investigate the importance of different biotic and abiotic factors as key drivers of spatial and seasonal distribution of protistan communities. We conducted an intensive survey of a 10 m2 grassland plot in Germany, focusing on a major group of protists, the Cercozoa. From 177 soil samples, collected from April to November, we obtained 694 Operational Taxonomy Units representing 〉6 million Illumina reads. All major cercozoan taxonomic and functional groups were present, dominated by the small flagellates of the Glissomonadida. We found evidence of environmental selection structuring the cercozoan communities both spatially and seasonally. Spatial analyses indicated that communities were correlated within a range of 3.5 m. Seasonal variations in the abundance of bacterivores and bacteria, followed by that of omnivores suggested a dynamic prey-predator succession. The most influential edaphic properties were moisture and clay content, which differentially affected each functional group. Our study is based on an intense sampling of protists at a small scale, thus providing a detailed description of the biodiversity of different taxa/functional groups and the ecological processes involved in shaping their distribution.
    Description: This work was partly supported by the DFG Priority Program 1374 “Infrastructure-Biodiversity-Exploratories.” Funding to AMF-D and MB was provided by BO 1907/18-1; funding to EK, SM, KMR, and RSB was provided by KA 1590/8-2 and KA 1590/8-3; funding to FD and MCR was provided by the BiodivERsA grant “Digging Deeper.” We are grateful to the Swiss National Science Foundation Grant 316030 150817 for funding the MiSeq instrument at the University of Geneva (CH).
    Keywords: Biogeography ; Functional traits ; Soil ecology ; Protozoa ; Microbial assembly ; Environmental selection ; Dispersal limitation ; Soil protists
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  • 36
    Publication Date: 2022-10-27
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 46 (2019): 10484–10494, doi:10.1029/2019GL083719.
    Description: Tropical cyclones (hurricanes) generate intense surface ocean cooling and vertical mixing resulting in nutrient upwelling into the photic zone and episodic phytoplankton blooms. However, their influence on the deep ocean remains unknown. Here we present evidence that hurricanes also impact the ocean's biological pump by enhancing export of labile organic material to the deep ocean. In October 2016, Category 3 Hurricane Nicole passed over the Bermuda Time Series site in the oligotrophic NW Atlantic Ocean. Following Nicole's passage, particulate fluxes of lipids diagnostic of fresh phytodetritus, zooplankton, and microbial biomass increased by 30–300% at 1,500 m depth and 30–800% at 3,200 m depth. Mesopelagic suspended particles following Nicole were also enriched in phytodetrital material and in zooplankton and bacteria lipids, indicating particle disaggregation and a deepwater ecosystem response. Predicted climate‐induced increases in hurricane frequency and/or intensity may significantly alter ocean biogeochemical cycles by increasing the strength of the biological pump.
    Description: This work and the Oceanic Flux Program time series were supported by the National Science Foundation Chemical Oceanography Program Grant OCE 1536644. The Bermuda Atlantic Time Series and Hydrostation S time series were supported by NSF Grants OCE 1756105 and OCE 1633125, respectively. We acknowledge the contributions of BATS technicians with CTD and pigment analyses. We sincerely thank the officers and crew of R/V Atlantic Explorer (Bermuda Institute of Ocean Sciences) for their expert assistance on the cruises. The data used in this study are listed in the figures, tables, and references, and are also available in the NSF's Biological and Chemical Oceanography Data Management Office (BCO‐DMO, https://doi.org/10.1575/1912/bco‐dmo.775902.1).
    Description: 2020-02-16
    Keywords: Hurricanes ; Carbon cycle ; North Atlantic Ocean ; Deep ocean ; Particle fluxes ; Lipid biomarkers
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  • 37
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(5), (2019): 2943-2968, doi:10.1029/2019JC015071.
    Description: In the Southern Ocean, polynyas exhibit enhanced rates of primary productivity and represent large seasonal sinks for atmospheric CO2. Three contrasting east Antarctic polynyas were visited in late December to early January 2017: the Dalton, Mertz, and Ninnis polynyas. In the Mertz and Ninnis polynyas, phytoplankton biomass (average of 322 and 354 mg chlorophyll a (Chl a)/m2, respectively) and net community production (5.3 and 4.6 mol C/m2, respectively) were approximately 3 times those measured in the Dalton polynya (average of 122 mg Chl a/m2 and 1.8 mol C/m2). Phytoplankton communities also differed between the polynyas. Diatoms were thriving in the Mertz and Ninnis polynyas but not in the Dalton polynya, where Phaeocystis antarctica dominated. These strong regional differences were explored using physiological, biological, and physical parameters. The most likely drivers of the observed higher productivity in the Mertz and Ninnis were the relatively shallow inflow of iron‐rich modified Circumpolar Deep Water onto the shelf as well as a very large sea ice meltwater contribution. The productivity contrast between the three polynyas could not be explained by (1) the input of glacial meltwater, (2) the presence of Ice Shelf Water, or (3) stratification of the mixed layer. Our results show that physical drivers regulate the productivity of polynyas, suggesting that the response of biological productivity and carbon export to future change will vary among polynyas.
    Description: This work was cofunded by the Australian Antarctic Division research projects AAS 4131 and 4291. This project was also supported by the Australian Government Cooperative Research Centres Programme through the Antarctic Climate & Ecosystems (ACE CRC). S. Moreau and C. Genovese were supported by the Australian Research Council's Special Research Initiative for Antarctic Gateway Partnership (project ID SR140300001). V. Puigcorbé and M. Roca‐Martí are grateful for the support from Pere Masque and Edith Cowan University. M.C. Arroyo was supported by the Dickhut Fellowship, administered by the Virginia Institute of Marine Science. The authors would like to thank the officers and crew of the R/V Aurora Australis for their logistic support, the CSIRO hydrochemists for their analyses of nutrient concentrations, and E. J. Yang for her microscope analysis of phytoplankton species. We also want to thank two anonymous reviewers for their very good comments on this study. The data presented in this paper are available on the Australian Antarctic Division (AAD) Data Centre at https://data.aad.gov.au/aadc/metadata/metadata_by_parameter.cfm.
    Description: 2019-09-28
    Keywords: Polynyas ; Primary productivity ; Phytoplankton biomass ; Ice shelves ; Sea ice ; Iron
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  • 38
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Goni, G. J., Sprintall, J., Bringas, F., Cheng, L., Cirano, M., Dong, S., Domingues, R., Goes, M., Lopez, H., Morrow, R., Rivero, U., Rossby, T., Todd, R. E., Trinanes, J., Zilberman, N., Baringer, M., Boyer, T., Cowley, R., Domingues, C. M., Hutchinson, K., Kramp, M., Mata, M. M., Reseghetti, F., Sun, C., Bhaskar, U., & Volko, D. More than 50 years of successful continuous temperature section measurements by the global expendable bathythermograph network, its integrability, societal benefits, and future. Frontiers in Marine Science, 6, (2019): 452, doi:10.3389/fmars.2019.00452.
    Description: The first eXpendable BathyThermographs (XBTs) were deployed in the 1960s in the North Atlantic Ocean. In 1967 XBTs were deployed in operational mode to provide a continuous record of temperature profile data along repeated transects, now known as the Global XBT Network. The current network is designed to monitor ocean circulation and boundary current variability, basin-wide and trans-basin ocean heat transport, and global and regional heat content. The ability of the XBT Network to systematically map the upper ocean thermal field in multiple basins with repeated trans-basin sections at eddy-resolving scales remains unmatched today and cannot be reproduced at present by any other observing platform. Some repeated XBT transects have now been continuously occupied for more than 30 years, providing an unprecedented long-term climate record of temperature, and geostrophic velocity profiles that are used to understand variability in ocean heat content (OHC), sea level change, and meridional ocean heat transport. Here, we present key scientific advances in understanding the changing ocean and climate system supported by XBT observations. Improvement in XBT data quality and its impact on computations, particularly of OHC, are presented. Technology development for probes, launchers, and transmission techniques are also discussed. Finally, we offer new perspectives for the future of the Global XBT Network.
    Description: GG, FB, SD, UR, MB, RD, and DV were supported by a grant from the NOAA/Ocean Observing and Monitoring Division (OOMD) and by NOAA's Atlantic Oceanographic and Meteorological Laboratory (AOML). The participation of JS and NZ in this study was supported by NOAA's Global Ocean Monitoring and Observing Program through Award NA15OAR4320071 and NSF Award 1542902. CD was funded by the Australian Research Council (FT130101532 and DP160103130); the Scientific Committee on Oceanic Research (SCOR) Working Group 148, funded by national SCOR committees and a grant to SCOR from the U.S. National Science Foundation (Grant OCE-1546580); and the Intergovernmental Oceanographic Commission of UNESCO/International Oceanographic Data and Information Exchange (IOC/IODE) IQuOD Steering Group. LC was supported by 2016YFC1401800.
    Keywords: Expendable bathythermographs ; Surface currents ; Subsurface currents ; Meridional heat transport ; Ocean heat content ; Sea level ; Extreme weather
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  • 39
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Turk, D., Wang, H., Hu, X., Gledhill, D. K., Wang, Z. A., Jiang, L., & Cai, W. Time of Emergence of surface ocean carbon dioxide trends in the North American coastal margins in support of ocean acidification observing system design. Frontiers in Marine Science, 6, (2019):91, doi:10.3389/fmars.2019.00091.
    Description: Time of Emergence (ToE) is the time when a signal emerges from the noise of natural variability. Commonly used in climate science for the detection of anthropogenic forcing, this concept has recently been applied to geochemical variables, to assess the emerging times of anthropogenic ocean acidification (OA), mostly in the open ocean using global climate and Earth System Models. Yet studies of OA variables are scarce within costal margins, due to limited multidecadal time-series observations of carbon parameters. ToE provides important information for decision making regarding the strategic configuration of observing assets, to ensure they are optimally positioned either for signal detection and/or process elicitation and to identify the most suitable variables in discerning OA-related changes. Herein, we present a short overview of ToE estimates on an OA variable, CO2 fugacity f(CO2,sw), in the North American ocean margins, using coastal data from the Surface Ocean CO2 Atlas (SOCAT) V5. ToE suggests an average theoretical timeframe for an OA signal to emerge, of 23(±13) years, but with considerable spatial variability. Most coastal areas are experiencing additional secular and/or multi-decadal forcing(s) that modifies the OA signal, and such forcing may not be sufficiently resolved by current observations. We provide recommendations, which will help scientists and decision makers design and implement OA monitoring systems in the next decade, to address the objectives of OceanObs19 (http://www.oceanobs19.net) in support of the United Nations Decade of Ocean Science for Sustainable Development (2021–2030) (https://en.unesco.org/ocean-decade) and the Sustainable Development Goal (SDG) 14.3 (https://sustainabledevelopment.un.org/sdg14) target to “Minimize and address the impacts of OA.”
    Description: HW was partially supported by an NSF grant (OCE#1654232) while being a research associate at TAMUCC.
    Keywords: Ocean acidification ; CO2 fugacity ; Time of emergence ; Climate change ; Novel statistical approaches ; Observing system optimization ; Decision making tool
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  • 40
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Heimbach, P., Fukumori, I., Hills, C. N., Ponte, R. M., Stammer, D., Wunsch, C., Campin, J., Cornuelle, B., Fenty, I., Forget, G., Koehl, A., Mazloff, M., Menemenlis, D., Nguyen, A. T., Piecuch, C., Trossman, D., Verdy, A., Wang, O., & Zhang, H. Putting it all together: Adding value to the global ocean and climate observing systems with complete self-consistent ocean state and parameter estimates. Frontiers in Marine Science, 6 (2019):55, doi:10.3389/fmars.2019.00055.
    Description: In 1999, the consortium on Estimating the Circulation and Climate of the Ocean (ECCO) set out to synthesize the hydrographic data collected by the World Ocean Circulation Experiment (WOCE) and the satellite sea surface height measurements into a complete and coherent description of the ocean, afforded by an ocean general circulation model. Twenty years later, the versatility of ECCO's estimation framework enables the production of global and regional ocean and sea-ice state estimates, that incorporate not only the initial suite of data and its successors, but nearly all data streams available today. New observations include measurements from Argo floats, marine mammal-based hydrography, satellite retrievals of ocean bottom pressure and sea surface salinity, as well as ice-tethered profiled data in polar regions. The framework also produces improved estimates of uncertain inputs, including initial conditions, surface atmospheric state variables, and mixing parameters. The freely available state estimates and related efforts are property-conserving, allowing closed budget calculations that are a requisite to detect, quantify, and understand the evolution of climate-relevant signals, as mandated by the Coupled Model Intercomparison Project Phase 6 (CMIP6) protocol. The solutions can be reproduced by users through provision of the underlying modeling and assimilation machinery. Regional efforts have spun off that offer increased spatial resolution to better resolve relevant processes. Emerging foci of ECCO are on a global sea level changes, in particular contributions from polar ice sheets, and the increased use of biogeochemical and ecosystem data to constrain global cycles of carbon, nitrogen and oxygen. Challenges in the coming decade include provision of uncertainties, informing observing system design, globally increased resolution, and moving toward a coupled Earth system estimation with consistent momentum, heat and freshwater fluxes between the ocean, atmosphere, cryosphere and land.
    Description: Major support for ECCO is provided by NASA's Physical Oceanography program via a contract to JPL/Caltech, with additional support through NASA's Modeling, Analysis and Prediction program, the Cryosphere Science program, and the Computational Modeling and Cyberinfrastructure program. Supplemental funding was obtained throughout the years via standard grants to individual team members from NSF, NOAA, and ONR.
    Keywords: ECCO ; Global ocean inverse modeling ; Optimal state and parameter estimation ; Adjoint method ; Ocean observations ; Coupled Earth system data assimilation ; Ocean reanalysis ; Global ocean circulation
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  • 41
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Smith, N., Kessler, W. S., Cravatte, S., Sprintall, J., Wijffels, S., Cronin, M. F., Sutton, A., Serra, Y. L., Dewitte, B., Strutton, P. G., Hill, K., Sen Gupta, A., Lin, X., Takahashi, K., Chen, D., & Brunner, S. Tropical pacific observing system. Frontiers in Marine Science, 6, (2019):31, doi:10.3389/fmars.2019.00031.
    Description: This paper reviews the design of the Tropical Pacific Observing System (TPOS) and its governance and takes a forward look at prospective change. The initial findings of the TPOS 2020 Project embrace new strategic approaches and technologies in a user-driven design and the variable focus of the Framework for Ocean Observing. User requirements arise from climate prediction and research, climate change and the climate record, and coupled modeling and data assimilation more generally. Requirements include focus on the upper ocean and air-sea interactions, sampling of diurnal variations, finer spatial scales and emerging demands related to biogeochemistry and ecosystems. One aim is to sample a diversity of climatic regimes in addition to the equatorial zone. The status and outlook for meeting the requirements of the design are discussed. This is accomplished through integrated and complementary capabilities of networks, including satellites, moorings, profiling floats and autonomous vehicles. Emerging technologies and methods are also discussed. The outlook highlights a few new foci of the design: biogeochemistry and ecosystems, low-latitude western boundary currents and the eastern Pacific. Low latitude western boundary currents are conduits of tropical-subtropical interactions, supplying waters of mid to high latitude origin to the western equatorial Pacific and into the Indonesian Throughflow. They are an essential part of the recharge/discharge of equatorial warm water volume at interannual timescales and play crucial roles in climate variability on regional and global scales. The tropical eastern Pacific, where extreme El Niño events develop, requires tailored approaches owing to the complex of processes at work there involving coastal upwelling, and equatorial cold tongue dynamics, the oxygen minimum zone and the seasonal double Intertropical Convergence Zone. A pilot program building on existing networks is envisaged, complemented by a process study of the East Pacific ITCZ/warm pool/cold tongue/stratus coupled system. The sustainability of TPOS depends on effective and strong collaborative partnerships and governance arrangements. Revisiting regional mechanisms and engaging new partners in the context of a planned and systematic design will ensure a multi-purpose, multi-faceted integrated approach that is sustainable and responsive to changing needs.
    Description: BD thanks LEFE-GMMC for financial support. JS participation in this study was supported by NOAA’s Global Ocean Monitoring and Observing Program through Award NA15OAR4320071. NOAA’s Ocean Observing and Monitoring Division has supported NS and WK and the TPOS 2020 Distributed Project Office.
    Keywords: Ocean observing ; Tropical Pacific ; TPOS 2020 ; User requirements ; Variable requirements ; Design ; Tropical moorings
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  • 42
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(3), (2019): 1778-1794, doi:10.1029/2018JC014775.
    Description: Abyssal ocean warming contributed substantially to anthropogenic ocean heat uptake and global sea level rise between 1990 and 2010. In the 2010s, several hydrographic sections crossing the South Pacific Ocean were occupied for a third or fourth time since the 1990s, allowing for an assessment of the decadal variability in the local abyssal ocean properties among the 1990s, 2000s, and 2010s. These observations from three decades reveal steady to accelerated bottom water warming since the 1990s. Strong abyssal (z 〉 4,000 m) warming of 3.5 (±1.4) m°C/year (m°C = 10−3 °C) is observed in the Ross Sea, directly downstream from bottom water formation sites, with warming rates of 2.5 (±0.4) m°C/year to the east in the Amundsen‐Bellingshausen Basin and 1.3 (±0.2) m°C/year to the north in the Southwest Pacific Basin, all associated with a bottom‐intensified descent of the deepest isotherms. Warming is consistently found across all sections and their occupations within each basin, demonstrating that the abyssal warming is monotonic, basin‐wide, and multidecadal. In addition, bottom water freshening was strongest in the Ross Sea, with smaller amplitude in the Amundsen‐Bellingshausen Basin in the 2000s, but is discernible in portions of the Southwest Pacific Basin by the 2010s. These results indicate that bottom water freshening, stemming from strong freshening of Ross Shelf Waters, is being advected along deep isopycnals and mixed into deep basins, albeit on longer timescales than the dynamically driven, wave‐propagated warming signal. We quantify the contribution of the warming to local sea level and heat budgets.
    Description: S. G. P. was supported by a U.S. GO‐SHIP postdoctoral fellowship through NSF grant OCE‐1437015, which also supported L. D. T. and S. M. and collection of U.S. GO‐SHIP data since 2014 on P06, S4P, P16, and P18. G. C. J. is supported by the Global Ocean Monitoring and Observation Program, National Oceanic and Atmospheric Administration (NOAA), U.S. Department of Commerce and NOAA Research. B. M. S and S. E. W. were supported by the Australian Government Department of the Environment and CSIRO through the Australian Climate Change Science Programme and by the National Environmental Science Program. We are grateful for the hard work of the science parties, officers, and crew of all the research cruises on which these CTD data were collected. We also thank the two anonymous reviewers for their helpful comments that improve the manuscript. This is PMEL contribution 4870. All CTD data sets used in this analysis are publicly available at the website (https://cchdo.ucsd.edu).
    Description: 2019-08-20
    Keywords: Abyssal warming ; Pacific deep circulation ; Deep steric sea level ; Deep warming variability ; Antarctic Bottom Water
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  • 43
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(3), (2019): 2088-2109, doi:10.1029/2018JC014583.
    Description: As observations and models improve their resolution of oceanic motions at ever finer horizontal scales, interest has grown in characterizing the transition from the geostrophically balanced flows that dominate at large‐scale to submesoscale turbulence and waves that dominate at small scales. In this study we examine the mesoscale‐to‐submesoscale (100 to 10 km) transition in an eastern boundary current, the southern California Current System (CCS), using repeated acoustic Doppler current profiler transects, sea surface height from high‐resolution nadir altimetry and output from a (1/48)° global model simulation. In the CCS, the submesoscale is as energetic as in western boundary current regions, but the mesoscale is much weaker, and as a result the transition lacks the change in kinetic energy (KE) spectral slope observed for western boundary currents. Helmholtz and vortex‐wave decompositions of the KE spectra are used to identify balanced and unbalanced contributions. At horizontal scales greater than 70 km, we find that observed KE is dominated by balanced geostrophic motions. At scales from 40 to 10 km, unbalanced contributions such as inertia‐gravity waves contribute as much as balanced motions. The model KE transition occurs at longer scales, around 125 km. The altimeter spectra are consistent with acoustic Doppler current profiler/model spectra at scales longer than 70/125 km, respectively. Observed seasonality is weak. Taken together, our results suggest that geostrophic velocities can be diagnosed from sea surface height on scales larger than about 70 km in the southern CCS.
    Description: This research was funded by NASA (NNX13AE44G, NNX13AE85G, NNX16AH67G, NNX16AO5OH, and NNX17AH53G). We thank Sung Yong Kim for providing the high‐frequency radar spectral estimates and the two anonymous reviewers for providing useful comments and suggestions that greatly improved the manuscript. High‐frequency ALES data for Jason‐1 and Jason‐2 altimeters are available upon request (https://openadb.dgfi.tum.de/en/contact/ALES). Both AltiKa and Sentinel‐3 altimeter products were produced and distributed by the Copernicus Marine and Environment Monitoring Service (CMEMS; http://www.marine.copernicus.eu). D. M. worked on the modeling component of this study at the Jet Propulsion Laboratory (JPL), California Institute of Technology, under a contract with the National Aeronautics and Space Administration (NASA). High‐end computing resources were provided by the NASA Advanced Supercomputing (NAS) Division of the Ames Research Center. The LLC output can be obtained from the ECCO project (ftp://ecco.jpl.nasa.gov/ECCO2/LLC4320/). The ADCP data are available at the Joint Archive for Shipboard ADCP data (JASADCP; http://ilikai.soest.hawaii.edu/sadcp).
    Description: 2019-08-21
    Keywords: Mesoscale ; Submesoscale ; Internal gravity waves
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  • 44
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geochemistry Geophysics Geosystems 20(3), (2019): 1485-1507, doi:10.1029/2018GC007985.
    Description: In 2015 a geothermal exploration well was drilled on the island of Tutuila, American Samoa. The sample suite from the drill core provides 645 m of volcanic stratigraphy from a Samoan volcano, spanning 1.45 million years of volcanic history. In the Tutuila drill core, shield lavas with an EM2 (enriched mantle 2) signature are observed at depth, spanning 1.46 to 1.44 Ma. These are overlain by younger (1.35 to 1.17 Ma) shield lavas with a primordial “common” (focus zone) component interlayered with lavas that sample a depleted mantle component. Following ~1.15 Myr of volcanic quiescence, rejuvenated volcanism initiated at 24.3 ka and samples an EM1 (enriched mantle 1) component. The timing of the initiation of rejuvenated volcanism on Tutuila suggests that rejuvenated volcanism may be tectonically driven, as Samoan hotspot volcanoes approach the northern terminus of the Tonga Trench. This is consistent with a model where the timing of rejuvenated volcanism at Tutuila and at other Samoan volcanoes relates to their distance from the Tonga Trench. Notably, the Samoan rejuvenated lavas have EM1 isotopic compositions distinct from shield lavas that are geochemically similar to “petit spot” lavas erupted outboard of the Japan Trench and late stage lavas erupted at Christmas Island located outboard of the Sunda Trench. Therefore, like the Samoan rejuvenated lavas, petit spot volcanism in general appears to be related to tectonic uplift outboard of subduction zones, and existing geochemical data suggest that petit spots share similar EM1 isotopic signatures.
    Description: Reviews from Kaj Hoernle and three anonymous reviewers are gratefully acknowledged. M. G. J. acknowledges support from the American Samoa Power Authority and National Science Foundation grants OCE‐1736984 and EAR‐1624840. The Tutuila drill core was the brainchild of Tim Bodell, without whom we would still have no stratigraphic record of Tutuila volcanism. The support of Utu Abe Malae and Matamua Katrina Mariner was instrumental to the project's success. We dedicate this paper to the memory of Abe Malae and his efforts to support science and education in American Samoa. Images of the entire drill core are available online (escholarship.org/uc/item/6gg6p61w). All data presented are either part of this study or previously published and are referenced in text.
    Description: 2019-08-13
    Keywords: Samoa ; Mantle geochemistry ; Petit spot ; EM1 ; Rejuvenated volcanism
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  • 45
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(7), (2019): 4618-4630, doi: 10.1029/2019JC014940.
    Description: The Arctic Ocean mixed layer interacts with the ice cover above and warmer, nutrient‐rich waters below. Ice‐Tethered Profiler observations in the Canada Basin of the Arctic Ocean over 2006–2017 are used to investigate changes in mixed layer properties. In contrast to decades of shoaling since at least the 1980s, the mixed layer deepened by 9 m from 2006–2012 to 2013–2017. Deepening resulted from an increase in mixed layer salinity that also weakened stratification at the base of the mixed layer. Vertical mixing alone can explain less than half of the observed change in mixed layer salinity, and so the observed increase in salinity is inferred to result from changes in freshwater accumulation via changes to ice‐ocean circulation or ice melt/growth and river runoff. Even though salinity increased, the shallowest density surfaces deepened by 5 m on average suggesting that Ekman pumping over this time period remained downward. A deeper mixed layer with weaker stratification has implications for the accessibility of heat and nutrients stored in the upper halocline. The extent to which the mixed layer will continue to deepen appears to depend primarily on the complex set of processes influencing freshwater accumulation.
    Description: We gratefully acknowledge J. Toole for helpful conversations. S. Cole was supported by the National Science Foundation under grant PLR‐1602926 and J. Stadler by the Woods Hole Oceanographic Institution Summer Student Fellowship program. Profile data are available via the Ice‐Tethered Profiler program website: http://whoi.edu/itp. SSM/I ice concentration data were downloaded from the National Snow and Ice Data Center.
    Description: 2019-12-22
    Keywords: Arctic Ocean ; Mixed layer ; Freshwater
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  • 46
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Speich, S., Lee, T., Muller-Karger, F., Lorenzoni, L., Pascual, A., Jin, D., Delory, E., Reverdin, G., Siddorn, J., Lewis, M. R., Marba, N., Buttigieg, P. L., Chiba, S., Manley, J., Kabo-Bah, A. T., Desai, K., & Ackerman, A. Editorial: Oceanobs19: An ocean of opportunity. Frontiers in Marine Science, 6, (2019): 570, doi:10.3389/fmars.2019.00570.
    Description: The OceanObs conferences are held once every 10 years for the scientific, technical, and operational communities involved in the planning, implementation, and use of ocean observing systems. They serve to communicate progress, promote plans, and to define advances in ocean observing in response to societies' needs. Each conference provides a forum for the community to review the state of the ocean observing science and operations, and to define goals and plans to achieve over the next decade.
    Description: The organizers of the OceanObs'19 conference thank the authors that conceived and jointly crafted the Community White Papers for their tremendous efforts, extensive international collaborations, and community wisdom. The organizers also thank the hundreds of reviewers of the CWPs for their dedication, and the time invested in reviewing the papers. The organizers of the OceanObs'19 conference wish to thank the chief editor of the journal, Dr. Carlos Duarte, and the Frontiers Marine Science staff, for their professionalism and support in this process.
    Keywords: OceanObs'19 ; Ocean observing ; Innovation ; Information ; Integration ; Interoperability ; Governance
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  • 47
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Todd, R. E., Chavez, F. P., Clayton, S., Cravatte, S., Goes, M., Greco, M., Ling, X., Sprintall, J., Zilberman, N., V., Archer, M., Aristegui, J., Balmaseda, M., Bane, J. M., Baringer, M. O., Barth, J. A., Beal, L. M., Brandt, P., Calil, P. H. R., Campos, E., Centurioni, L. R., Chidichimo, M. P., Cirano, M., Cronin, M. F., Curchitser, E. N., Davis, R. E., Dengler, M., deYoung, B., Dong, S., Escribano, R., Fassbender, A. J., Fawcett, S. E., Feng, M., Goni, G. J., Gray, A. R., Gutierrez, D., Hebert, D., Hummels, R., Ito, S., Krug, M., Lacan, F., Laurindo, L., Lazar, A., Lee, C. M., Lengaigne, M., Levine, N. M., Middleton, J., Montes, I., Muglia, M., Nagai, T., Palevsky, H., I., Palter, J. B., Phillips, H. E., Piola, A., Plueddemann, A. J., Qiu, B., Rodrigues, R. R., Roughan, M., Rudnick, D. L., Rykaczewski, R. R., Saraceno, M., Seim, H., Sen Gupta, A., Shannon, L., Sloyan, B. M., Sutton, A. J., Thompson, L., van der Plas, A. K., Volkov, D., Wilkin, J., Zhang, D., & Zhang, L. Global perspectives on observing ocean boundary current systems. Frontiers in Marine Science, 6, (2010); 423, doi: 10.3389/fmars.2019.00423.
    Description: Ocean boundary current systems are key components of the climate system, are home to highly productive ecosystems, and have numerous societal impacts. Establishment of a global network of boundary current observing systems is a critical part of ongoing development of the Global Ocean Observing System. The characteristics of boundary current systems are reviewed, focusing on scientific and societal motivations for sustained observing. Techniques currently used to observe boundary current systems are reviewed, followed by a census of the current state of boundary current observing systems globally. The next steps in the development of boundary current observing systems are considered, leading to several specific recommendations.
    Description: RT was supported by The Andrew W. Mellon Foundation Endowed Fund for Innovative Research at WHOI. FC was supported by the David and Lucile Packard Foundation. MGo was funded by NSF and NOAA/AOML. XL was funded by China’s National Key Research and Development Projects (2016YFA0601803), the National Natural Science Foundation of China (41490641, 41521091, and U1606402), and the Qingdao National Laboratory for Marine Science and Technology (2017ASKJ01). JS was supported by NOAA’s Global Ocean Monitoring and Observing Program (Award NA15OAR4320071). DZ was partially funded by the Joint Institute for the Study of the Atmosphere and Ocean (JISAO) under NOAA Cooperative Agreement NA15OAR4320063. BS was supported by IMOS and CSIRO’s Decadal Climate Forecasting Project. We gratefully acknowledge the wide range of funding sources from many nations that have enabled the observations and analyses reviewed here.
    Keywords: Western boundary current systems ; Eastern boundary current systems ; Ocean observing systems ; Time series ; Autonomous underwater gliders ; Drifters ; Remote sensing ; Moorings
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  • 48
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Oehler, T., Tamborski, J., Rahman, S., Moosdorf, N., Ahrens, J., Mori, C., Neuholz, R., Schnetger, B., & Beck, M. DSi as a tracer for submarine groundwater discharge. Frontiers in Marine Science, 6, (2019): 563, doi:10.3389/fmars.2019.00563.
    Description: Submarine groundwater discharge (SGD) is an important source of nutrients and metals to the coastal ocean, affects coastal ecosystems, and is gaining recognition as a relevant water resource. SGD is usually quantified using geochemical tracers such as radon or radium. However, a few studies have also used dissolved silicon (DSi) as a tracer for SGD, as DSi is usually enriched in groundwater when compared to surface waters. In this study, we discuss the potential of DSi as a tracer in SGD studies based on a literature review and two case studies from contrasting environments. In the first case study, DSi is used to calculate SGD fluxes in a tropical volcanic-carbonate karstic region (southern Java, Indonesia), where SGD is dominated by terrestrial groundwater discharge. The second case study discusses DSi as a tracer for marine SGD (i.e., recirculated seawater) in the tidal flat area of Spiekeroog (southern North Sea), where SGD is dominantly driven by tidal pumping through beach sands. Our results indicate that DSi is a useful tracer for SGD in various lithologies (e.g., karstic, volcanic, complex) to quantify terrestrial and marine SGD fluxes. DSi can also be used to trace groundwater transport processes in the sediment and the coastal aquifer. Care has to be taken that all sources and sinks of DSi are known and can be quantified or neglected. One major limitation is that DSi is used by siliceous phytoplankton and therefore limits its applicability to times of the year when primary production of siliceous phytoplankton is low. In general, DSi is a powerful tracer for SGD in many environments. We recommend that DSi should be used to complement other conventionally used tracers, such as radon or radium, to help account for their own shortcomings.
    Description: TO, NM, and the presented case study 1 were funded through the BMBF junior research group SGD-NUT (grant #01LN1307A). Open access publication fees are paid by Leibniz-Centre for Tropical Marine Research internal funds. The presented case study 2 was financially supported by the DFG Research Group “BioGeoChemsitry of Tidal Flats”, the Ph.D. Research Training Group “The ecology of molecules” funded by the Ministry for Science and Culture of Lower Saxony, and the Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg.
    Keywords: Submarine groundwater discharge ; DSi ; Silica ; Tracer ; Radon ; Radium
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  • 49
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Meyssignac, B., Boyer, T., Zhao, Z., Hakuba, M. Z., Landerer, F. W., Stammer, D., Koehl, A., Kato, S., L'Ecuyer, T., Ablain, M., Abraham, J. P., Blazquez, A., Cazenave, A., Church, J. A., Cowley, R., Cheng, L., Domingues, C. M., Giglio, D., Gouretski, V., Ishii, M., Johnson, G. C., Killick, R. E., Legler, D., Llovel, W., Lyman, J., Palmer, M. D., Piotrowicz, S., Purkey, S. G., Roemmich, D., Roca, R., Savita, A., von Schuckmann, K., Speich, S., Stephens, G., Wang, G., Wijffels, S. E., & Zilberman, N. Measuring global ocean heat content to estimate the Earth energy Imbalance. Frontiers in Marine Science, 6, (2019): 432, doi: 10.3389/fmars.2019.00432.
    Description: The energy radiated by the Earth toward space does not compensate the incoming radiation from the Sun leading to a small positive energy imbalance at the top of the atmosphere (0.4–1 Wm–2). This imbalance is coined Earth’s Energy Imbalance (EEI). It is mostly caused by anthropogenic greenhouse gas emissions and is driving the current warming of the planet. Precise monitoring of EEI is critical to assess the current status of climate change and the future evolution of climate. But the monitoring of EEI is challenging as EEI is two orders of magnitude smaller than the radiation fluxes in and out of the Earth system. Over 93% of the excess energy that is gained by the Earth in response to the positive EEI accumulates into the ocean in the form of heat. This accumulation of heat can be tracked with the ocean observing system such that today, the monitoring of Ocean Heat Content (OHC) and its long-term change provide the most efficient approach to estimate EEI. In this community paper we review the current four state-of-the-art methods to estimate global OHC changes and evaluate their relevance to derive EEI estimates on different time scales. These four methods make use of: (1) direct observations of in situ temperature; (2) satellite-based measurements of the ocean surface net heat fluxes; (3) satellite-based estimates of the thermal expansion of the ocean and (4) ocean reanalyses that assimilate observations from both satellite and in situ instruments. For each method we review the potential and the uncertainty of the method to estimate global OHC changes. We also analyze gaps in the current capability of each method and identify ways of progress for the future to fulfill the requirements of EEI monitoring. Achieving the observation of EEI with sufficient accuracy will depend on merging the remote sensing techniques with in situ measurements of key variables as an integral part of the Ocean Observing System.
    Description: GJ was supported by the NOAA Research. MP and RK were supported by the Met Office Hadley Centre Climate Programme funded by BEIS and Defra. JC was partially supported by the Centre for Southern Hemisphere Oceans Research, a joint research centre between QNLM and CSIRO. CD and AS were funded by the Australian Research Council (FT130101532 and DP160103130) and its Centre of Excellence for Climate Extremes (CLEX). IQuOD team members (TB, RC, LC, CD, VG, MI, MP, and SW) were supported by the Scientific Committee on Oceanic Research (SCOR) Working Group 148, funded by the National SCOR Committees and a grant to SCOR from the U.S. National Science Foundation (Grant OCE-1546580), as well as the Intergovernmental Oceanographic Commission of UNESCO/International Oceanographic Data and Information Exchange (IOC/IODE) IQuOD Steering Group. ZZ was supported by the National Aeronautics and Space Administration (NNX17AH14G). LC was supported by the National Key Research and Development Program of China (2017YFA0603200 and 2016YFC1401800).
    Keywords: Ocean heat content ; Sea level ; Ocean mass ; Ocean surface fluxes ; ARGO ; Altimetry ; GRACE ; Earth Energy Imbalance
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  • 50
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Hoarfrost, A., Balmonte, J. P., Ghobrial, S., Ziervogel, K., Bane, J., Gawarkiewicz, G., & Arnosti, C. Gulf Stream ring water intrusion on the Mid-Atlantic Bight continental shelf break affects microbially driven carbon cycling. Frontiers in Marine Science, 6, (2019): 394, doi:10.3389/fmars.2019.00394.
    Description: Warm core, anticyclonic rings that spin off from the Gulf Stream circulate through the region directly offshore of the Mid-Atlantic Bight. If a warm core ring reaches the continental shelf break, its warm, highly saline water may subduct under cooler, fresher continental shelf surface water, resulting in subsurface waters at the shelf break and over the upper continental slope with high temperatures and salinities and distinct physical and chemical properties characteristic of Gulf Stream water. Such intruding water may also have microbial communities with distinct functional capacities, which may in turn affect the rate and nature of carbon cycling in this coastal/shelf environment. However, the functional capabilities of microbial communities within ring intrusion waters relative to surrounding continental shelf waters are largely unexplored. We investigated microbial community capacity to initiate organic matter remineralization by measuring hydrolysis of a suite of polysaccharide, peptide, and glucose substrates along a transect oriented across the Mid-Atlantic Bight shelf, shelf break, and upper slope. At the outermost sampling site, warm and salty water derived from a Gulf Stream warm core ring was present in the lower portion of the water column. This water exhibited hydrolytic capacities distinct from other sampling sites, and exhibited lower heterotrophic bacterial productivity overall. Warm core rings adjacent to the Mid-Atlantic Bight shelf have increased in frequency and duration in recent years. As the influence of warm core rings on the continental shelf and slope increases in the future, the rate and nature of organic matter remineralization on the continental shelf may also shift.
    Description: This study was funded by the NSF (OCE-1332881 and OCE-1736772 to CA; OCE-1657853 to GG), with additional funding provided by the DOE (DE-SC0013887).
    Keywords: Warm core ring ; Ring intrusion ; Mid-Atlantic Bight ; Heterotrophy ; Carbon cycling ; Enzymatic activity
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  • 51
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Foltz, G. R., Brandt, P., Richter, I., Rodriguez-Fonsecao, B., Hernandez, F., Dengler, M., Rodrigues, R. R., Schmidt, J. O., Yu, L., Lefevre, N., Da Cunha, L. C., Mcphaden, M. J., Araujo, M., Karstensen, J., Hahn, J., Martin-Rey, M., Patricola, C. M., Poli, P., Zuidema, P., Hummels, R., Perez, R. C., Hatje, V., Luebbecke, J. F., Palo, I., Lumpkin, R., Bourles, B., Asuquo, F. E., Lehodey, P., Conchon, A., Chang, P., Dandin, P., Schmid, C., Sutton, A., Giordani, H., Xue, Y., Illig, S., Losada, T., Grodsky, S. A., Gasparinss, F., Lees, T., Mohino, E., Nobre, P., Wanninkhof, R., Keenlyside, N., Garcon, V., Sanchez-Gomez, E., Nnamchi, H. C., Drevillon, M., Storto, A., Remy, E., Lazar, A., Speich, S., Goes, M., Dorrington, T., Johns, W. E., Moum, J. N., Robinson, C., Perruches, C., de Souza, R. B., Gaye, A. T., Lopez-Paragess, J., Monerie, P., Castellanos, P., Benson, N. U., Hounkonnou, M. N., Trotte Duha, J., Laxenairess, R., & Reul, N. The tropical Atlantic observing system. Frontiers in Marine Science, 6(206), (2019), doi:10.3389/fmars.2019.00206.
    Description: he tropical Atlantic is home to multiple coupled climate variations covering a wide range of timescales and impacting societally relevant phenomena such as continental rainfall, Atlantic hurricane activity, oceanic biological productivity, and atmospheric circulation in the equatorial Pacific. The tropical Atlantic also connects the southern and northern branches of the Atlantic meridional overturning circulation and receives freshwater input from some of the world’s largest rivers. To address these diverse, unique, and interconnected research challenges, a rich network of ocean observations has developed, building on the backbone of the Prediction and Research Moored Array in the Tropical Atlantic (PIRATA). This network has evolved naturally over time and out of necessity in order to address the most important outstanding scientific questions and to improve predictions of tropical Atlantic severe weather and global climate variability and change. The tropical Atlantic observing system is motivated by goals to understand and better predict phenomena such as tropical Atlantic interannual to decadal variability and climate change; multidecadal variability and its links to the meridional overturning circulation; air-sea fluxes of CO2 and their implications for the fate of anthropogenic CO2; the Amazon River plume and its interactions with biogeochemistry, vertical mixing, and hurricanes; the highly productive eastern boundary and equatorial upwelling systems; and oceanic oxygen minimum zones, their impacts on biogeochemical cycles and marine ecosystems, and their feedbacks to climate. Past success of the tropical Atlantic observing system is the result of an international commitment to sustained observations and scientific cooperation, a willingness to evolve with changing research and monitoring needs, and a desire to share data openly with the scientific community and operational centers. The observing system must continue to evolve in order to meet an expanding set of research priorities and operational challenges. This paper discusses the tropical Atlantic observing system, including emerging scientific questions that demand sustained ocean observations, the potential for further integration of the observing system, and the requirements for sustaining and enhancing the tropical Atlantic observing system.
    Description: MM-R received funding from the MORDICUS grant under contract ANR-13-SENV-0002-01 and the MSCA-IF-EF-ST FESTIVAL (H2020-EU project 797236). GF, MG, RLu, RP, RW, and CS were supported by NOAA/OAR through base funds to AOML and the Ocean Observing and Monitoring Division (OOMD; fund reference 100007298). This is NOAA/PMEL contribution #4918. PB, MDe, JH, RH, and JL are grateful for continuing support from the GEOMAR Helmholtz Centre for Ocean Research Kiel. German participation is further supported by different programs funded by the Deutsche Forschungsgemeinschaft, the Deutsche Bundesministerium für Bildung und Forschung (BMBF), and the European Union. The EU-PREFACE project funded by the EU FP7/2007–2013 programme (Grant No. 603521) contributed to results synthesized here. LCC was supported by the UERJ/Prociencia-2018 research grant. JOS received funding from the Cluster of Excellence Future Ocean (EXC80-DFG), the EU-PREFACE project (Grant No. 603521) and the BMBF-AWA project (Grant No. 01DG12073C).
    Keywords: Tropical Atlantic Ocean ; Observing system ; Weather ; Climate ; Hurricanes ; Biogeochemistry ; Ecosystems ; Coupled model bias
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  • 52
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Druffel, E. R. M., Griffin, S., Wang, N., Garcia, N. G., McNichol, A. P., Key, R. M., & Walker, B. D. Dissolved organic radiocarbon in the central Pacific Ocean. Geophysical Research Letters, 46(10), (2019):5396-5403, doi:10.1029/2019GL083149.
    Description: We report marine dissolved organic carbon (DOC) concentrations, and DOC ∆14C and δ13C values in seawater collected from the central Pacific. Surface ∆14C values are low in equatorial and polar regions where upwelling occurs and high in subtropical regions dominated by downwelling. A core feature of these data is that 14C aging of DOC (682 ± 86 14C years) and dissolved inorganic carbon (643 ± 40 14C years) in Antarctic Bottom Water between 54.0°S and 53.5°N are similar. These estimates of aging are minimum values due to mixing with deep waters. We also observe minimum ∆14C values (−550‰ to −570‰) between the depths of 2,000 and 3,500 m in the North Pacific, though the source of the low values cannot be determined at this time.
    Description: We thank Jennifer Walker, Xiaomei Xu, and Dachun Zhang for their help with the stable carbon isotope measurements; John Southon and staff of the Keck Carbon Cycle AMS Laboratory for their assistance and advice; the support of chief scientists Samantha Siedlecki, Molly Baringer, Alison Macdonald, and Sabine Mecking; the guidance of Jim Swift and Dennis Hansell for shared ship time; and Sarah Bercovici for collecting water on the GoA cruise. We appreciate the comments of Christian Lewis and Niels Hauksson on this manuscript. This work was supported by NSF (OCE‐141458941 to E. R. M. D. and OCE‐0824864, OCE‐1558654, and Cooperative Agreement OCE1239667 to R. M. K. and A. P. M.), the Fred Kavli Foundation, the Keck Carbon Cycle AMS Laboratory, and the NSF/NOAA‐funded GO‐SHIP Program. This research was undertaken, in part, thanks to funding from the Canada Research Chairs program (to B. D. W.) and an American Chemical Society Petroleum Research Fund New Directions grant (55430‐ND2 to E. R. M. D. and B. D. W.). Data from the P16N cruises are available in Table S2 in the Supporting Information and at the Repeat Hydrography Data Center at the CCHDO website (http://cdiac.esd.ornl.gov/oceans/index.html) using the expo codes 3RO20150329, 3RO20150410, and 3RO20150525. There are no real or perceived financial conflicts of interests for any author.
    Description: 2019-11-02
    Keywords: Dissolved organic carbon ; Radiocarbon ; Pacific Ocean ; Dissolved inorganic carbon ; Deep ocean circulation ; AABW
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  • 53
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Plummeer, S., Taylor, A. E., Harvey, E. L., Hansel, C. M., & Diaz, J. M. Dynamic regulation of extracellular superoxide production by the coccolithophore Emiliania huxleyi (CCMP 374). Frontiers in Microbiology, 10, (2019): 1546, doi: 10.3389/fmicb.2019.01546.
    Description: In marine waters, ubiquitous reactive oxygen species (ROS) drive biogeochemical cycling of metals and carbon. Marine phytoplankton produce the ROS superoxide (O2−) extracellularly and can be a dominant source of O2− in natural aquatic systems. However, the cellular regulation, biological functioning, and broader ecological impacts of extracellular O2− production by marine phytoplankton remain mysterious. Here, we explored the regulation and potential roles of extracellular O2− production by a noncalcifying strain of the cosmopolitan coccolithophorid Emiliania huxleyi, a key species of marine phytoplankton that has not been examined for extracellular O2− production previously. Cell-normalized extracellular O2− production was the highest under presumably low-stress conditions during active proliferation and inversely related to cell density during exponential growth phase. Removal of extracellular O2− through addition of the O2− scavenger superoxide dismutase (SOD), however, increased growth rates, growth yields, cell biovolume, and photosynthetic efficiency (Fv/Fm) indicating an overall physiological improvement. Thus, the presence of extracellular O2− does not directly stimulate E. huxleyi proliferation, as previously suggested for other phytoplankton, bacteria, fungi, and protists. Extracellular O2− production decreased in the dark, suggesting a connection with photosynthetic processes. Taken together, the tight regulation of this stress independent production of extracellular O2− by E. huxleyi suggests that it could be involved in fundamental photophysiological processes.
    Description: This research was supported by a Junior Faculty Seed Grant from the University of Georgia Research Foundation (JD), a National Science Foundation (NSF) Graduate Research Fellowship (SP), and NSF grant OCE-1355720 (CH). The FlowCam® and FIRe were purchased through a NSF Equipment Improvement Grant (1624593).
    Keywords: Reactive oxygen species ; Superoxide ; Emiliania huxleyi ; Photophysiology ; Oxidative stress ; Redox homeostasis ; Biogeochemical cycling
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  • 54
    Publication Date: 2022-10-19
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans, 123(11), (2018): 7795-7818. doi: 10.1029/2018JC013794.
    Description: This work studies the subduction of the shelf water along the onshore edge of a warm‐core ring that impinges on the edge of the Mid‐Atlantic Bight continental shelf. The dynamical analysis is based on observations by satellites and from the Ocean Observatories Initiative Pioneer Array observatory as well as idealized numerical model simulations. They together show that frontogenesis‐induced submesoscale frontal subduction with order‐one Rossby and Froude numbers occurs on the onshore edge of the ring. The subduction flow results from the onshore migration of the warm‐core ring that intensifies the density front on the interface of the ring and shelf waters. The subduction is a part of the cross‐front secondary circulation trying to relax the intensifying density front. The dramatically different physical and biogeochemical properties of the ring and shelf waters provide a great opportunity to visualize the subduction phenomenon. Entrained by the ring‐edge current, the subducted shelf water is subsequently transported offshore below a surface layer of ring water and alongside of the surface‐visible shelf‐water streamer. It explains the historical observations of isolated subsurface packets of shelf water along the ring periphery in the slope sea. Model‐based estimate suggests that this type of subduction‐associated subsurface cross‐shelfbreak transport of the shelf water could be substantial relative to other major forms of shelfbreak water exchange. This study also proposes that outward spreading of the ring‐edge front by the frontal subduction may facilitate entrainment of the shelf water by the ring‐edge current and enhances the shelf‐water streamer transport at the shelf edge.
    Description: W. G. Z. was supported by the National Science Foundation under grants OCE‐1657853, OCE‐1657803, and OCE 1634965. JP is grateful for the support of the Woods Hole Oceanographic Institution Summer Student Fellow Program in 2016 and 2017. W. G. Z. thanks Kenneth Brink, Glen Gawarkiewicz, Rocky Geyer, Steven Lentz, Dennis McGillicuddy, Robert Todd, and John Trowbridge for helpful discussions during the course of the study or useful comments on earlier versions of the manuscript. The satellite sea surface temperature data were obtained from the University of Delaware Ocean Exploration, Remote Sensing, Biogeography Lab (led by Matthew Oliver), through the Mid‐Atlantic Coastal Ocean Observing System (MARACOOS) data server (http://tds.maracoos.org/thredds/catalog.html). The OOI Pioneer Array mooring and glider data presented in this paper were downloaded from the National Science Foundation OOI data portal (http://ooinet.oceanobservatories.org) in July–August 2016.
    Description: 2019-04-15
    Keywords: Frontal subduction ; Warm‐core ring ; Mid‐Atlantic Bight ; Shelf‐water streamer ; Cross‐shelf exchange ; OOI Pioneer Array
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  • 55
    Publication Date: 2022-10-20
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 1123(11), (2018): 8568-8580. doi: 10.1029/2018JC014352.
    Description: In the past decades, in the context of a changing ocean submitted to an increasing human activity, a progressive decrease in the frequencies (pitch) of blue whale vocalizations has been observed worldwide. Its causes, of natural or anthropogenic nature, are still unclear. Based on 7 years of continuous acoustic recordings at widespread sites in the southern Indian Ocean, we show that this observation stands for five populations of large whales. The frequency of selected units of vocalizations of fin, Antarctic, and pygmy blue whales has steadily decreased at a rate of a few tenths of hertz per year since 2002. In addition to this interannual frequency decrease, blue whale vocalizations display seasonal frequency shifts. We show that these intra‐annual shifts correlate with seasonal changes in the ambient noise near their call frequency. This ambient noise level, in turn, shows a strong correlation with the seasonal presence of icebergs, which are one of the main sources of oceanic noise in the Southern Hemisphere. Although cause‐and‐effect relationships are difficult to ascertain, wide‐ranging changes in the acoustic environment seem to have a strong impact on the vocal behavior of large baleen whales. Seasonal frequency shifts may be due to short‐term changes in the ambient noise, and the interannual frequency decline to long‐term changes in the acoustic properties of the ocean and/or in postwhaling changes in whale abundances.
    Description: The authors wish to thank the Captains and crews of RV Marion Dufresne for the successful deployments and recoveries of the hydrophones of the DEFLOHYDRO (Royer, 2008) and OHASISBIO (Royer, 2009) experiments. French cruises were funded by the French Polar Institute (IPEV) with additional support from INSU‐CNRS. NOAA/PMEL also contributed to the DEFLOHYDRO project. E. C. L. was supported by a PhD fellowship from the University of Brest and from the Regional Council of Brittany (Conseil Régional de Bretagne). The contribution of Mickael Beauverger at LGO to the logistics and deployment of the OHASISBIO cruises is greatly appreciated. The data underlying this analysis (weekly averaged frequencies of Antarctic blue whales, pygmy blue whales, and fin whales and daily averaged noise levels at each site) are accessible at http://doi.org/10.17882/51007.
    Description: 2019-05-27
    Keywords: Large baleen whales ; Blue whale calls ; Frequency decrease ; Bioacoustics ; Frequency shifts ; Ambient noise
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  • 56
    Publication Date: 2022-10-20
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Dodge, K. L., Kukulya, A. L., Burke, E., & Baumgartner, M. F. (2018). TurtleCam: A "smart" autonomous underwater vehicle for investigating behaviors and habitats of sea turtles. Frontiers in Marine Science, 5, (2018): 90. doi:10.3389/fmars.2018.00090.
    Description: Sea turtles inhabiting coastal environments routinely encounter anthropogenic hazards, including fisheries, vessel traffic, pollution, dredging, and drilling. To support mitigation of potential threats, it is important to understand fine-scale sea turtle behaviors in a variety of habitats. Recent advancements in autonomous underwater vehicles (AUVs) now make it possible to directly observe and study the subsurface behaviors and habitats of marine megafauna, including sea turtles. Here, we describe a “smart” AUV capability developed to study free-swimming marine animals, and demonstrate the utility of this technology in a pilot study investigating the behaviors and habitat of leatherback turtles (Dermochelys coriacea). We used a Remote Environmental Monitoring UnitS (REMUS-100) AUV, designated “TurtleCam,” that was modified to locate, follow and film tagged turtles for up to 8 h while simultaneously collecting environmental data. The TurtleCam system consists of a 100-m depth rated vehicle outfitted with a circular Ultra-Short BaseLine receiver array for omni-directional tracking of a tagged animal via a custom transponder tag that we attached to the turtle with two suction cups. The AUV collects video with six high-definition cameras (five mounted in the vehicle nose and one mounted aft) and we added a camera to the animal-borne transponder tag to record behavior from the turtle's perspective. Since behavior is likely a response to habitat factors, we collected concurrent in situ oceanographic data (bathymetry, temperature, salinity, chlorophyll-a, turbidity, currents) along the turtle's track. We tested the TurtleCam system during 2016 and 2017 in a densely populated coastal region off Cape Cod, Massachusetts, USA, where foraging leatherbacks overlap with fixed fishing gear and concentrated commercial and recreational vessel traffic. Here we present example data from one leatherback turtle to demonstrate the utility of TurtleCam. The concurrent video, localization, depth and environmental data allowed us to characterize leatherback diving behavior, foraging ecology, and habitat use, and to assess how turtle behavior mediates risk to impacts from anthropogenic activities. Our study demonstrates that an AUV can successfully track and image leatherback turtles feeding in a coastal environment, resulting in novel observations of three-dimensional subsurface behaviors and habitat use, with implications for sea turtle management and conservation.
    Description: This research was funded by National Oceanic and Atmospheric Administration Grant #NA16NMF4720074 to the Massachusetts Division of Marine Fisheries under the Species Recovery Grants to States program. Additional funding was provided by Jean Tempel, Hydroid Inc., and over 100 Project WHOI donors.
    Keywords: Autonomous underwater vehicle AUV ; CTD ; Entanglement ; Habitat ; Foraging behavior ; Jellyfish ; Leatherback sea turtle ; Video camera
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  • 57
    Publication Date: 2022-10-20
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 123(11), (2018): 8411-8429, doi: 10.1029/2018JC014178.
    Description: A method for estimating gross primary production (GPP) is presented and validated against a numerical model of Chesapeake Bay that includes realistic physical and biological forcing. The method statistically fits a photosynthesis‐irradiance response curve using the observed near‐surface time rate of change of dissolved oxygen and the incoming solar radiation, yielding estimates of the light‐saturated photosynthetic rate and the initial slope of the photosynthesis‐irradiance response curve. This allows estimation of GPP with 15‐day temporal resolution. The method is applied to the output from a numerical model that has high skill at reproducing both surface and near‐bottom dissolved oxygen variations observed in Chesapeake Bay in 2013. The rate of GPP predicted by the numerical model is known, as are the contributions from physical processes, allowing the proposed diel method to be rigorously assessed. At locations throughout the main stem of the Bay, the method accurately extracts the underlying rate of GPP, including pronounced seasonal variability and spatial variability. Errors associated with the method are primarily the result of contributions by the divergence in turbulent oxygen flux, which changes sign over the surface mixed layer. As a result, there is an optimal vertical location with minimal bias where application of the method is most accurate.
    Description: This paper is the result of research funded in part by NOAA's U.S. Integrated Ocean Observing System (IOOS) Program Office as a subcontract to the Woods Hole Oceanographic Institution under award NA13NOS120139 to the Southeastern University Research Association. All of the model output, as well as both the CBIBS data (2010–2016) and the bottom oxygen data of Scully (2016b), are publicly available through the THREDDS server associated with the IOOS Coastal Modeling Testbed site: https://comt.ioos.us/projects/cb_hypoxia.
    Description: 2019-05-24
    Keywords: Gross primary production ; Vertical mixing ; Numerical model ; Chesapeake Bay
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  • 58
    Publication Date: 2022-10-20
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Theoretical considerations on factors confounding the interpretation of the oceanic carbon export ratio. Global Biogeochemical Cycles, 32(11), (2018); 1644-1658, doi:10.1029/2018GB006003.
    Description: The fraction of primary production exported out of the surface ocean, known as the export ratio (ef ratio), is often used to assess how various factors, including temperature, primary production, phytoplankton size, and community structure, affect the export efficiency of an ecosystem. To investigate possible causes for reported discrepancies in the dominant factors influencing the export efficiency, we develop a metabolism‐based mechanistic model of the ef ratio. Consistent with earlier studies, we find based on theoretical considerations that the ef ratio is a negative function of temperature. We show that the ef ratio depends on the optical depth, defined as the physical depth times the light attenuation coefficient. As a result, varying light attenuation may confound the interpretation of ef ratio when measured at a fixed depth (e.g., 100 m) or at the base of the mixed layer. Finally, we decompose the contribution of individual factors on the seasonality of the ef ratio. Our results show that at high latitudes, the ef ratio at the base of mixed layer is strongly influenced by mixed layer depth and surface irradiation on seasonal time scales. Future studies should report the ef ratio at the base of the euphotic layer or account for the effect of varying light attenuation if measured at a different depth. Overall, our modeling study highlights the large number of factors confounding the interpretation of field observations of the ef ratio.
    Description: Z. L was supported by a NASA Earth and Space Science Fellowship (Grant NNX13AN85H) and the Postdoctoral Scholarship Program at Woods Hole Oceanographic Institution. N. C. was supported by NASA Grant 5109296. Satellite data, nutrient concentration, and monthly MLD climatology are downloaded from NASA ocean color (http://oceancolor.gsfc.nasa.gov/cms/), World Ocean Atlas (https://www.nodc.noaa.gov/OC5/woa13/), and http://www.ifremer.fr/cerweb/deboyer/mld/home.php, respectively.
    Description: 2019-04-13
    Keywords: Oceanic carbon export ratio ; Net community production ; Export production ; Net primary production
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  • 59
    Publication Date: 2022-10-20
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124 (2019): 196-211, doi:10.1029/2018JC014313.
    Description: Since the late nineteenth century, channel depths have more than doubled in parts of New York Harbor and the tidal Hudson River, wetlands have been reclaimed and navigational channels widened, and river flow has been regulated. To quantify the effects of these modifications, observations and numerical simulations using historical and modern bathymetry are used to analyze changes in the barotropic dynamics. Model results and water level records for Albany (1868 to present) and New York Harbor (1844 to present) recovered from archives show that the tidal amplitude has more than doubled near the head of tides, whereas increases in the lower estuary have been slight (〈10%). Channel deepening has reduced the effective drag in the upper tidal river, shifting the system from hyposynchronous (tide decaying landward) to hypersynchronous (tide amplifying). Similarly, modeling shows that coastal storm effects propagate farther landward, with a 20% increase in amplitude for a major event. In contrast, the decrease in friction with channel deepening has lowered the tidally averaged water level during discharge events, more than compensating for increased surge amplitude. Combined with river regulation that reduced peak discharges, the overall risk of extreme water levels in the upper tidal river decreased after channel construction, reducing the water level for the 10‐year recurrence interval event by almost 3 m. Mean water level decreased sharply with channel modifications around 1930, and subsequent decadal variability has depended both on river discharge and sea level rise. Channel construction has only slightly altered tidal and storm surge amplitudes in the lower estuary.
    Description: Funding for D. K. R., W. R. G., and C. K. S. was provided by NSF Coastal SEES awards OCE-1325136 and OCE-1325102. Funding for S.T. and H. Z. was provided by the U.S. Army Corps of Engineers (award W1927 N-14-2-0015), and NSF (Career Award 1455350). Data supporting this study are posted to Zenodo (https://doi.org/10.5281/zenodo.1298636).
    Description: 2019-06-11
    Keywords: Barotropic tides ; Flood frequency ; Storm surge ; Dredging ; Estuary ; Tidal river
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  • 60
    Publication Date: 2022-10-20
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Wave generation, dissipation, and disequilibrium in an embayment with complex bathymetry. Journal of Geophysical Research-Oceans, 123(11), (2018): 7856-7876, doi:10.1029/2018JC014381.
    Description: Heterogeneous, sharply varying bathymetry is common in estuaries and embayments, and complex interactions between the bathymetry and wave processes fundamentally alter the distribution of wave energy. The mechanisms that control the generation and dissipation of wind waves in an embayment with heterogeneous, sharply varying bathymetry are evaluated with an observational and numerical study of the Delaware Estuary. Waves in the lower bay depend on both local wind forcing and remote wave forcing from offshore, but elsewhere in the estuary waves are controlled by the local winds and the response of the wavefield to bathymetric variability. Differences in the wavefield with wind direction highlight the impacts of heterogeneous bathymetry and limited fetch. Under the typical winter northwest wind conditions waves are fetch‐limited in the middle estuary and reach equilibrium with local water depth only in the lower bay. During southerly wind conditions typical of storms, wave energy is near equilibrium in the lower bay, and midestuary waves are attenuated by the combination of whitecapping and bottom friction, particularly over the steep, longitudinal shoals. Although the energy dissipation due to bottom friction is generally small relative to whitecapping, it becomes significant where the waves shoal abruptly due to steep bottom topography. In contrast, directional spreading keeps wave heights in the main channel significantly less than local equilibrium. The wave disequilibrium in the deep navigational channel explains why the marked increase in depth by dredging of the modern channel has had little impact on wave conditions.
    Description: Funding was provided by National Science Foundation Coastal SEES: Toward Sustainable Urban Estuaries in the Anthropocene (OCE 1325136) and Ministry of Science and Technology (MOST 107‐2611‐M‐006‐004). We thank James Kirby, Fengyan Shi, and the two anonymous reviewers for their careful reading of our manuscript and their insightful comments. We thank Tracy Quirk for providing wave measurements in Bombay Hook, DE and Stow Creek, NJ. We thank Katie Pijanowski for compiling historical and modern bathymetric data for the estuary. Data supporting this study are posted to Zenodo (http://doi.org/10.5281/zenodo.1433055).
    Description: 2019-04-04
    Keywords: Estuarine hydrodynamics ; Wave energy ; Equilibrium wave ; Anthropogenic impact
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  • 61
    Publication Date: 2022-10-20
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Using carbon isotope fractionation to constrain the extent of methane dissolution into the water column surrounding a natural hydrocarbon gas seep in the northern gulf of Mexico. Geochemistry Geophysics Geosystems, 19(11), (2018); 4459-4475., doi:10.1029/2018GC007705.
    Description: A gas bubble seep located in the northern Gulf of Mexico was investigated over several days to determine whether changes in the stable carbon isotopic ratio of methane can be used as a tracer for methane dissolution through the water column. Gas bubble and water samples were collected at the seafloor and throughout the water column for isotopic ratio analysis of methane. Our results show that changes in methane isotopic ratios are consistent with laboratory experiments that measured the isotopic fractionation from methane dissolution. A Rayleigh isotope model was applied to the isotope data to determine the fraction of methane dissolved at each depth. On average, the fraction of methane dissolved surpasses 90% past an altitude of 400 m above the seafloor. Methane dissolution was also investigated using a modified version of the Texas A&M Oil spill (Outfall) Calculator (TAMOC) where changes in methane isotopic ratios could be calculated. The TAMOC model results show that dissolution depends on depth and bubble size, explaining the spread in measured isotopic ratios during our investigations. Both the Rayleigh and TAMOC models show that methane bubbles quickly dissolve following emission from the seafloor. Together, these results show that it is possible to use measurements of natural methane isotopes to constrain the extent of methane dissolution following seafloor emission.
    Description: This research was made possible by two grants from the Gulf of Mexico Research Initiative: Gulf Integrated Spill Response (GISR) Consortium (awarded to J. D. K. and S. A. S.) and Center for Integrated Modeling and Assessment of the Gulf Ecosystem (C‐IMAGE) II (awarded to S. A. S.). Additional support was provided by the U.S. Department of Energy (DE‐FE0028980; awarded to J. D. K.). Data are publicly available through the Gulf of Mexico Research Initiative Information & Data Cooperative (GRIIDC). Methane concentration and isotopic ratio data can be found at https://data.gulfresearchinitiative.org/data/R1.x137.000:0025, and TAMOC model scripts and results are found at https://data.gulfresearchinitiative.org/data/R1.x137.000:0026. The coversion of methane isotopic ratio data used in this manuscript can be found at https://data.gulfresearchinitiative.org/data/R1.x137.000:0028. We want to thank the captain and crew of the E/V Nautilus and the operators of ROV Hercules and Argus during the GISR G08 cruise and Nicole Raineault for their outstanding support at sea. Acoustically identifying the bubble flare was managed by Andone Lavery, and support for collecting gas and water samples was provided by John Bailey. We also want to thank Sean Sylva for analytical assistance on shore, Inok Jun for helping create the sampling schematics, and David Brink‐Roby for helping create the sample site map.
    Description: 2019-04-20
    Keywords: Methane ; Bubble ; Hydrate ; Dissolution ; Isotope
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  • 62
    Publication Date: 2022-10-20
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 123(11), (2018): 8430-8443, doi: 10.1029/2018JC014179.
    Description: A diel method for estimating gross primary production (GPP) is applied to nearly continuous measurements of near‐surface dissolved oxygen collected at seven locations throughout the main stem of Chesapeake Bay. The data were collected through the Chesapeake Bay Interpretive Buoy System and span the period 2010–2016. At all locations, GPP exhibits pronounced seasonal variability consistent temperature‐dependent phytoplankton growth. At the Susquehanna Buoy, which is located within the estuarine turbidity maximum, rates of GPP are negatively correlated with uncalibrated turbidity data consistent with light limitation at this location. The highest rates of GPP are located immediately down Bay from the estuarine turbidity maximum and decrease moving seaward consistent with nutrient limitation. Rates of GPP at the mouth (First Landing Buoy) are roughly a factor of 3 lower than the rates in the upper Bay (Patapsco). At interannual time scales, the summer (June–July) rate of GPP averaged over all stations is positively correlated (r2 = 0.62) with the March Susquehanna River discharge and a multiple regression model that includes spring river discharge, and summer water temperature can explain most (r2 = 0.88) of the interannual variance in the observed rate of GPP. The correlation with river discharge is consistent with an increase in productivity fueled by increased nutrient loading. More generally, the spatial and temporal patterns inferred using this method are consistent with our current understanding of primary production in the Bay, demonstrating the potential this method has for making highly resolved measurements in less well studied estuarine systems.
    Description: This paper is the result of research funded in part by NOAA's U.S. Integrated Ocean Observing System (IOOS) Program Office as a subcontract to the Woods Hole Oceanographic Institution under award NA13NOS120139 to the Southeastern University Research Association. All of the data analyzed in this paper are publicly available including the CBIBS data (http://buoybay.noaa.gov), the NCEP NARR data (https://www.esrl.noaa.gov/psd), and the Kd‐490 MODIS data (ftp://ftp.star.nesdis.noaa.gov/pub/socd1/ecn/data/modis/k490noaa/monthly/cd/). Model output analyzed in this paper is publicly available through the THREDDS server associated with the IOOS Coastal and Ocean Modeling Testbed (COMT) site (https://comt.ioos.us/projects/cb_hypoxia). Postprocessed and compiled data for all seven CBIBS locations including the interpolated values of incoming solar radiation and satellite‐derived Kd‐490 can also be download from the COMT site.
    Description: 2019-05-25
    Keywords: Gross primary production ; Chesapeake Bay ; Observing system ; Diel variability
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  • 63
    Publication Date: 2022-10-20
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(2), (2019):1005-1028, doi:10.1029/2018JC014585.
    Description: A numerical model with a vortex force formalism is used to study the role of wind waves in the momentum budget and subtidal exchange of a shallow coastal plain estuary, Delaware Bay. Wave height and age in the bay have a spatial distribution that is controlled by bathymetry and fetch, with implications for the surface drag coefficient in young, underdeveloped seas. Inclusion of waves in the model leads to increases in the surface drag coefficient by up to 30% with respect to parameterizations in which surface drag is only a function of wind speed, in agreement with recent observations of air‐sea fluxes in estuaries. The model was modified to prevent whitecapping wave dissipation from generating breaking forces since that contribution is integrally equivalent to the wind stress. The proposed adjustment is consistent with previous studies of wave‐induced nearshore currents and with additional parameterizations for breaking forces in the model. The mean momentum balance during a simulated wind event was mainly between the pressure gradient force and surface stress, with negligible contributions by vortex, wave breaking (i.e., depth‐induced), and Stokes‐Coriolis forces. Modeled scenarios with realistic Delaware bathymetry suggest that the subtidal bay‐ocean exchange at storm time scales is sensitive to wave‐induced surface drag coefficient, wind direction, and mass transport due to the Stokes drift. Results herein are applicable to shallow coastal systems where the typical wave field is young (i.e., wind seas) and modulated by bathymetry.
    Description: This work was supported by National Science Foundation Coastal SEES grant 1325136. We acknowledge Christopher Sommerfield's Group, Jia‐Lin Chen, and Julia Levin who provided assistance with the model configuration. We also thank Nirnimesh Kumar, Greg Gerbi, Melissa Moulton, and the Rutgers Ocean Modeling group for constructive feedback. Insightful comments by two anonymous reviewers helped improve the manuscript. Model files are available in an open access repository (https://doi.org/10.5281/zenodo.1695900).
    Description: 2019-07-28
    Keywords: Bathymetry ; Vortex forces ; Subtidal exchange ; Wind waves ; Surface drag
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  • 64
    Publication Date: 2022-10-20
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(7), (2019): 4784-4802, doi: 10.1029/2019JC015006.
    Description: Modifications for navigation since the late 1800s have increased channel depth (H) in the lower Hudson River estuary by 10–30%, and at the mouth the depth has more than doubled. Observations along the lower estuary show that both salinity and stratification have increased over the past century. Model results comparing predredging bathymetry from the 1860s with modern conditions indicate an increase in the salinity intrusion of about 30%, which is roughly consistent with the H5/3 scaling expected from theory for salt flux dominated by steady exchange. While modifications including a recent deepening project have been concentrated near the mouth, the changes increase salinity and threaten drinking water supplies more than 100 km landward. The deepening has not changed the responses to river discharge (Qr) of the salinity intrusion (~Qr−1/3) or mean stratification (Qr2/3). Surprisingly, the increase in salinity intrusion with channel deepening results in almost no change in the estuarine circulation. This contrasts sharply with local scaling based on local dynamics of an H2 dependence, but it is consistent with a steady state salt balance that allows scaling of the estuarine circulation based on external forcing factors and is independent of depth. In contrast, the observed and modeled increases in stratification are opposite of expectations from the steady state balance, which could be due to reduction in mixing with loss of shallow subtidal regions. Overall, the mean shift in estuarine parameter space due to channel deepening has been modest compared with the monthly‐to‐seasonal variability due to tides and river discharge.
    Description: Funding was provided by NSF Coastal SEES (OCE 1325136). Data supporting this study are posted to Zenodo (https://doi.org/10.5281/zenodo.2551285) or are available by contacting the author.
    Description: 2019-12-07
    Keywords: Estuarine circulation ; Salinity intrusion ; Stratification ; Dredging ; Hudson River
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  • 65
    Publication Date: 2022-10-20
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Clague, D. A., Paduan, J. B., Caress, D. W., Moyer, C. L., Glazer, B. T., & Yoerger, D. R. Structure of Lo'ihi Seamount, Hawai'i and lava flow morphology from high-resolution mapping. Frontiers in Earth Science, 7, (2019):58, doi:10.3389/feart.2019.00058.
    Description: The early development and growth of oceanic volcanoes that eventually grow to become ocean islands are poorly known. In Hawai‘i, the submarine Lō‘ihi Seamount provides the opportunity to determine the structure and growth of such a nascent oceanic island. High-resolution bathymetric data were collected using AUV Sentry at the summit and at two hydrothermal vent fields on the deep south rift of Lō‘ihi Seamount. The summit records a nested series of caldera and pit crater collapse events, uplift of one resurgent block, and eruptions that formed at least five low lava shields that shaped the summit. The earliest and largest caldera, formed ∼5900 years ago, bounds almost the entire summit plateau. The resurgent block was uplifted slightly more than 100 m and has a tilted surface with a dip of about 6.5° toward the SE. The resurgent block was then modified by collapse of a pit crater centered in the block that formed West Pit. The shallowest point on Lō‘ihi’s summit is 986 m deep and is located on the northwest edge of the resurgent block. Several collapse events culminated in formation of East Pit, and the final collapse formed Pele’s Pit in 1996. The nine mapped collapse and resurgent structures indicate the presence of a shallow crustal magma chamber, ranging from depths of ∼1 km to perhaps 2.5 km below the summit, and demonstrate that shallow sub-caldera magma reservoirs exist during the late pre-shield stage. On the deep south rift zone are young medium- to high-flux lava flows that likely erupted in 1996 and drained the shallow crustal magma chamber to trigger the collapse that formed Pele’s Pit. These low hummocky and channelized flows had molten cores and now host the FeMO hydrothermal field. The Shinkai Deep hydrothermal site is located among steep-sided hummocky flows that formed during low-flux eruptions. The Shinkai Ridge is most likely a coherent landslide block that originated on the east flank of Lō‘ihi.
    Description: Funding for the collection of the data was provided by the National Science Foundation OCE1155756 to CM and the Schmidt Ocean Institute to BG. Support for DC and JP to process the data and write the manuscript was provided by a grant from the David and Lucile Packard Foundation to MBARI.
    Keywords: Caldera ; Pit crater ; Landslide ; Channelized flows ; Hummocky flows ; Lō‘ihi Seamount
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  • 66
    Publication Date: 2022-10-20
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution-NonCommercial‐NoDerivs License. The definitive version was published in Van Dam, B. R., Edson, J. B., & Tobias, C. Parameterizing air-water gas exchange in the shallow, microtidal New River estuary. Journal of Geophysical Research-Biogeosciences, 124(7), (2019): 2351-2363, doi: 10.1029/2018JG004908.
    Description: Estuarine CO2 emissions are important components of regional and global carbon budgets, but assessments of this flux are plagued by uncertainties associated with gas transfer velocity (k) parameterization. We combined direct eddy covariance measurements of CO2 flux with waterside pCO2 determinations to generate more reliable k parameterizations for use in small estuaries. When all data were aggregated, k was described well by a linear relationship with wind speed (U10), in a manner consistent with prior open ocean and estuarine k parameterizations. However, k was significantly greater at night and under low wind speed, and nighttime k was best predicted by a parabolic, rather than linear, relationship with U10. We explored the effect of waterside thermal convection but found only a weak correlation between convective scale and k. Hence, while convective forcing may be important at times, it appears that factors besides waterside thermal convection were likely responsible for the bulk of the observed nighttime enhancement in k. Regardless of source, we show that these day‐night differences in k should be accounted for when CO2 emissions are assessed over short time scales or when pCO2 is constant and U10 varies. On the other hand, when temporal variability in pCO2 is large, it exerts greater control over CO2 fluxes than does k parameterization. In these cases, the use of a single k value or a simple linear relationship with U10 is often sufficient. This study provides important guidance for k parameterization in shallow or microtidal estuaries, especially when diel processes are considered.
    Description: We thank SERDP and DCERP for funding and support. Dennis Arbige assisted with EC tower construction, and Susan Cohen provided invaluable logistical support. I also thank Marc Alperin (UNC Chapel Hill) for his thoughtful guidance and encouragement with this project. All data sets for this manuscript are available at FigShare (https://doi.org/10.6084/m9.figshare.7276877.v1). Additional funding for this project was provided by DAAD (57429828) from funds of the German Federal Ministry of Education and Research (BMBF).
    Keywords: Air‐water CO2 exchange ; Gas transfer velocity ; Convective ; Eddy covariance ; Estuary ; Gas exchange
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  • 67
    Publication Date: 2022-10-20
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 46(3), (2019):1505-1512, doi:10.1029/2018GL080006.
    Description: Mesoscale eddies, energetic vortices covering nearly a third of the ocean surface at any one time, modulate the spatial and temporal evolution of the mixed layer. We present a global analysis of concurrent satellite observations of mesoscale eddies with hydrographic profiles by autonomous Argo floats, revealing rich geographic and seasonal variability in the influence of eddies on mixed layer depth. Anticyclones deepen the mixed layer depth, whereas cyclones thin it, with the magnitude of these eddy‐induced mixed layer depth anomalies being largest in winter. Eddy‐centric composite averages reveal that the largest anomalies occur at the eddy center and decrease with distance from the center. Furthermore, the extent to which eddies modulate mixed layer depth is linearly related to the sea surface height amplitude of the eddies. Finally, large eddy‐mediated mixed layer depth anomalies are more common in anticyclones when compared to cyclones. We present candidate mechanisms for this observed asymmetry.
    Description: This project was supported by NASA grants NNX13AE47G and NNX16AH9G. This manuscript was improved as a result of helpful discussions with Jeffery Early, Johnathan Lilly, and Eric Kunze of Northwest Research Associates. D. J. M. also gratefully acknowledges support of the National Science Foundation. The eddy data set used here is distributed by AVISO at https://www.aviso.altimetry.fr/en/data/products/value-added-products/global-mesoscale-eddy-trajectoryproduct.html. The MLD data can be accessed at http://mixedlayer.ucsd.edu.
    Description: 2019-06-06
    Keywords: Mesoscale eddies ; Ocean mixing ; Satellite ; Floats ; Mixed layer
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  • 68
    Publication Date: 2022-10-20
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Zhang, Y., Ryan, J. P., Kieft, B., Hobson, B. W., McEwen, R. S., Godin, M. A., Harvey, J. B., Barone, B., Bellingham, J. G., Birch, J. M., Scholin, C. A., & Chavez, F. P. Targeted sampling by autonomous underwater vehicles. Frontiers in Marine Science, 6 (2019): 415, doi:10.3389/fmars.2019.00415.
    Description: In the vast ocean, many ecologically important phenomena are temporally episodic, localized in space, and move according to local currents. To effectively study these complex and evolving phenomena, methods that enable autonomous platforms to detect and respond to targeted phenomena are required. Such capabilities allow for directed sensing and water sample acquisition in the most relevant and informative locations, as compared against static grid surveys. To meet this need, we have designed algorithms for autonomous underwater vehicles that detect oceanic features in real time and direct vehicle and sampling behaviors as dictated by research objectives. These methods have successfully been applied in a series of field programs to study a range of phenomena such as harmful algal blooms, coastal upwelling fronts, and microbial processes in open-ocean eddies. In this review we highlight these applications and discuss future directions.
    Description: This work was supported by the David and Lucile Packard Foundation. The 2015 experiment in Monterey Bay was partially supported by NOAA Ecology and Oceanography of Harmful Algal Blooms (ECOHAB) Grant NA11NOS4780030. The 2018 SCOPE Hawaiian Eddy Experiment was partially supported by the National Science Foundation (OCE-0962032 and OCE-1337601), Simons Foundation Grant #329108, the Gordon and Betty Moore Foundation (Grant #3777, #3794, and #2728), and the Schmidt Ocean Institute for R/V Falkor Cruise FK180310. Publication of this paper was funded by the Schmidt Ocean Institute.
    Keywords: Targeted sampling ; Autonomous underwater vehicle (AUV) ; Environmental Sample Processor (ESP) ; Phytoplankton patch ; Upwelling front ; Open-ocean eddy
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  • 69
    Publication Date: 2022-10-20
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Cronin, M. F., Gentemann, C. L., Edson, J., Ueki, I., Bourassa, M., Brown, S., Clayson, C. A., Fairall, C. W., Farrar, J. T., Gille, S. T., Gulev, S., Josey, S. A., Kato, S., Katsumata, M., Kent, E., Krug, M., Minnett, P. J., Parfitt, R., Pinker, R. T., Stackhouse, P. W., Jr., Swart, S., Tomita, H., Vandemark, D., Weller, R. A., Yoneyama, K., Yu, L., & Zhang, D. Air-sea fluxes with a focus on heat and momentum. Frontiers in Marine Science, 6, (2019): 430, doi:10.3389/fmars.2019.00430.
    Description: Turbulent and radiative exchanges of heat between the ocean and atmosphere (hereafter heat fluxes), ocean surface wind stress, and state variables used to estimate them, are Essential Ocean Variables (EOVs) and Essential Climate Variables (ECVs) influencing weather and climate. This paper describes an observational strategy for producing 3-hourly, 25-km (and an aspirational goal of hourly at 10-km) heat flux and wind stress fields over the global, ice-free ocean with breakthrough 1-day random uncertainty of 15 W m–2 and a bias of less than 5 W m–2. At present this accuracy target is met only for OceanSITES reference station moorings and research vessels (RVs) that follow best practices. To meet these targets globally, in the next decade, satellite-based observations must be optimized for boundary layer measurements of air temperature, humidity, sea surface temperature, and ocean wind stress. In order to tune and validate these satellite measurements, a complementary global in situ flux array, built around an expanded OceanSITES network of time series reference station moorings, is also needed. The array would include 500–1000 measurement platforms, including autonomous surface vehicles, moored and drifting buoys, RVs, the existing OceanSITES network of 22 flux sites, and new OceanSITES expanded in 19 key regions. This array would be globally distributed, with 1–3 measurement platforms in each nominal 10° by 10° box. These improved moisture and temperature profiles and surface data, if assimilated into Numerical Weather Prediction (NWP) models, would lead to better representation of cloud formation processes, improving state variables and surface radiative and turbulent fluxes from these models. The in situ flux array provides globally distributed measurements and metrics for satellite algorithm development, product validation, and for improving satellite-based, NWP and blended flux products. In addition, some of these flux platforms will also measure direct turbulent fluxes, which can be used to improve algorithms for computation of air-sea exchange of heat and momentum in flux products and models. With these improved air-sea fluxes, the ocean’s influence on the atmosphere will be better quantified and lead to improved long-term weather forecasts, seasonal-interannual-decadal climate predictions, and regional climate projections.
    Description: EK was funded by the NERC CLASS Program (NE/R015953/1). CLG was funded by NASA grant 80NSSC18K0837. SG was funded by MEGAGRANT P220 program (#14.W03.31.0006).
    Keywords: Air-sea heat flux ; Latent heat flux ; Surface radiation ; Ocean wind stress ; Autonomous surface vehicle ; OceanSITES ; ICOADS ; Satellite-based ocean monitoring system
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  • 70
    Publication Date: 2022-10-20
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 46(3), (2019):1531-1536, doi:10.1029/2018GL081106.
    Description: Low‐frequency surf zone eddies disperse material between the shoreline and the continental shelf, and velocity fluctuations with frequencies as low as a few mHz have been observed previously on several beaches. Here spectral estimates of surf zone currents are extended to an order of magnitude lower frequency, resolving an extremely low frequency peak of approximately 0.5 mHz that is observed for a range of beaches and wave conditions. The magnitude of the 0.5‐mHz peak increases with increasing wave energy and with spatial inhomogeneity of bathymetry or currents. The 0.5‐mHz peak may indicate the frequency for which nonlinear energy transfers from higher‐frequency, smaller‐scale motions are balanced by dissipative processes and thus may be the low‐frequency limit of the hypothesized 2‐D cascade of energy from breaking waves to lower frequency motions.
    Description: We thank R. Guza, T. Herbers, and T. Lippmann for their leadership roles during the SandyDuck and NCEX projects and the CCS (SIO), PVLAB (WHOI), and FRF (USACE) field teams for deploying, maintaining, and recovering sensors in harsh conditions over many years. Funding was provided by ASD(R&E), NSF, and ONR. The data can be obtained via https://chlthredds.erdc.dren.mil/thredds/catalog/frf/catalog.html and https://pv‐lab.org.
    Description: 2019-07-02
    Keywords: Surf zone currents ; Nearshore processes ; Breaking waves ; Vorticity
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  • 71
    Publication Date: 2022-10-20
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Trowbridge, J., Weller, R., Kelley, D., Dever, E., Plueddemann, A., Barth, J. A., & Kawka, O. TThe Ocean Observatories Initiative. Frontiers in Marine Science, 6, (2019):74, doi:10.3389/fmars.2019.00074.
    Description: The Ocean Observatories Initiative (OOI) is an integrated network that enables scientific investigation of interlinked physical, chemical, biological and geological processes throughout the global ocean. With near real-time data delivery via a common Cyberinfrastructure, the OOI instruments two contrasting ocean systems at three scales. The Regional Cabled Array instruments a tectonic plate and overlying ocean in the northeast Pacific, providing a permanent electro-optical cable connecting multiple seafloor nodes that provide high power and bandwidth to seafloor sensors and moorings with instrumented wire crawlers, all with speed-of-light interactive capabilities. Coastal arrays include the Pioneer Array, a relocatable system currently quantifying the New England shelf-break front, and the Endurance Array, a fixed system off Washington and Oregon with connections to the Regional Cabled Array. The Global Arrays host deep-ocean moorings and gliders to provide interdisciplinary measurements of the water column, mesoscale variability, and air-sea fluxes at critical high latitude locations. The OOI has unique aspects relevant to the international ocean observing community. The OOI uses common sensor types, verification protocols, and data formats across multiple platform types in diverse oceanographic regimes. OOI observing is sustained, with initial deployment in 2013 and 25 years of operation planned. The OOI is distributed among sites selected for scientific relevance based on community input and linked by important oceanographic processes. Scientific highlights include real-time observations of a submarine volcanic eruption, time-series observations of methane bubble plumes from Southern Hydrate Ridge off Oregon, observations of anomalous low-salinity pulses off Oregon, discovery of new mechanisms for intrusions of the Gulf Stream onto the shelf in the Middle Atlantic Bight, documentation of deep winter convection in the Irminger Sea, and observations of extreme surface forcing at the most southerly surface mooring in the world ocean.
    Description: This work was supported by NSF funded Construction and Initial Operation of the OOI under Award 0957938 and Management and Operation of the OOI under Award 1743430.
    Keywords: Ocean observing ; Marine geology and geophysics ; Physical oceanography ; Biological oceanography ; Chemical oceanography ; Ocean engineering
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  • 72
    Publication Date: 2022-10-20
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution-NonCommercial‐NoDerivs License. The definitive version was published in Clayson, C. A., & Edson, J. B. Diurnal surface flux variability over western boundary currents. Geophysical Research Letters, 46(15), (2019): 9174-9182, doi:10.1029/2019GL082826.
    Description: An analysis of a satellite ocean surface turbulent flux product demonstrated that, as expected, the western boundary current regions dominate the seasonal cycle amplitude. Surprisingly, our analysis of the global ocean diurnal flux variability also demonstrated a regional maximum in the winter over the western boundary current regions. We conducted comparisons with in situ data from several buoys located in these regions. The buoy data were in general agreement with the relative magnitude, timing, and importance of each of the bulk parameters driving the latent and sensible heat fluxes. Further analysis demonstrated that the strength and timing of the diurnal signal is related to the location of the buoy relative to the region of maximum heat flux and sea surface temperature gradient. In both regions, the timing of the higher winds coincides with the moistest surface layer, indicating that surface fluxes rather than entrainment mixing play a key role in this phenomenon.
    Description: CAC gratefully acknowledges funding from the NASA MAP and NEWS programs (NNX13AN48G and NNX15AI47A). CLIMODE data were funded by the U.S. National Science Foundation (http://uop.whoi.edu/projects/CLIMODE/climodedata.html). KEO data are provided by the OCS Project Office of NOAA/PMEL (https://www.pmel.noaa.gov/ocs/data/disdel/). JKEO data are provided by RIGC/JAMSTEC and PMEL/NOAA (http://www.jamstec.go.jp/iorgc/ocorp/ktsfg/data/jkeo/). SeaFlux data are provided by the U.S. NOAA Climate Data Record Program (https://www.ncdc.noaa.gov/cdr).
    Keywords: Diurnal variability ; Western boundary currents ; Surface fluxes ; Atmospheric boundary layer
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  • 73
    Publication Date: 2022-10-20
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Wang, Z. A., Moustahfid, H., Mueller, A., V., Michel, A. P. M., Mowlem, M., Glazer, B. T., Mooney, T. A., Michaels, W., McQuillan, J. S., Robidart, J. C., Churchill, J., Sourisseau, M., Daniel, A., Schaap, A., Monk, S., Friedman, K., & Brehmer, P. Advancing observation of ocean biogeochemistry, biology, and ecosystems with cost-effective in situ sensing technologies. Frontiers in Marine Science, 6, (2019): 519, doi:10.3389/fmars.2019.00519.
    Description: Advancing our understanding of ocean biogeochemistry, biology, and ecosystems relies on the ability to make observations both in the ocean and at the critical boundaries between the ocean and other earth systems at relevant spatial and temporal scales. After decades of advancement in ocean observing technologies, one of the key remaining challenges is how to cost-effectively make measurements at the increased resolution necessary for illuminating complex system processes and rapidly evolving changes. In recent years, biogeochemical in situ sensors have been emerging that are threefold or more lower in cost than established technologies; the cost reduction for many biological in situ sensors has also been significant, although the absolute costs are still relatively high. Cost savings in these advancements has been driven by miniaturization, new methods of packaging, and lower-cost mass-produced components such as electronics and materials. Recently, field projects have demonstrated the potential for science-quality data collection via large-scale deployments using cost-effective sensors and deployment strategies. In the coming decade, it is envisioned that ocean biogeochemistry and biology observations will be revolutionized by continued innovation in sensors with increasingly low price points and the scale-up of deployments of these in situ sensor technologies. The goal of this study is therefore to: (1) provide a review of existing sensor technologies that are already achieving cost-effectiveness compared with traditional instrumentation, (2) present case studies of cost-effective in situ deployments that can provide insight into methods for bridging observational gaps, (3) identify key challenge areas where progress in cost reduction is lagging, and (4) present a number of potentially transformative directions for future ocean biogeochemical and biological studies using cost-effective technologies and deployment strategies.
    Description: The unpublished work related to iTag and mini-DO sensor was supported by the US National Science Foundation (NSF) (DBI-145559). The US NSF (OCE-1233654), the US National Institute of Standards and Technology (NIST) (60NANB10D024), and the NOAA Sea Grant (2017-R/RCM-51) supported the development of the CHANOS sensor. Part of this work was supported by the European Commission via the STEMM-CCS, AtlantOS, SenseOCEAN, TriAtlas, and Preface projects under the European Union’s Horizon 2020 research and innovation program (Grant Nos. 603521, 654462, 633211, 614141, and 817578), as well as the AWA project (IRD and BMBF; 01DG12073E), and the Blue Belt Initiative (BBI). The work on the LOC nutrients and carbonate sensors was supported by the Autonuts and CarCASS projects, part of the UK Natural Environment Research Council capital program OCEANIDS (NE/P020798/1 and NE/P02081X/1). The work on zooplankton and chlorophyll sensors was co-supported by the ROEC program (Reseau d’Observation en Environnement Côtier 2015–2020) and the European Regional Development Fund (ERDF).
    Keywords: In situ ; Sensor ; OceanObs ; Ocean technology ; EOVs ; Biogeochemistry ; Biology ; Cost effective
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  • 74
    Publication Date: 2022-10-26
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Cael, B. B., & Bisson, K. (2018). Particle flux parameterizations: Quantitative and mechanistic similarities and differences. Frontiers in Marine Science, 5, (2018): 395. doi:10.3389/fmars.2018.00395.
    Description: The depth-attenuation of sinking particulate organic carbon (POC) is of particular importance for the ocean's role in the global carbon cycle. Numerous idealized flux-vs.-depth relationships are available to parameterize this process in Earth System Models. Here we show that these relationships are statistically indistinguishable from available POC flux profile data. Despite their quantitative similarity, we also show these relationships have very different implications for the flux leaving the upper ocean, as well as for the mechanisms governing POC flux. We discuss how this tension might be addressed both observationally and in modeling studies.
    Description: The National Aeronautics and Space Administration supported this work (awards NNX16AR47G and NNX16AR49G).
    Keywords: Carbon export ; Martin curve ; Carbon cycle ; Remineralization depth ; Particulate organic matter
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  • 75
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Solid Earth 123(11), (2018): 9376-9406. doi: 10.1029/2018JB015985.
    Description: Improved constraints on the mechanical behavior of magma chambers is essential for understanding volcanic processes; however, the role of crystal mush on the mechanical evolution of magma chambers has not yet been systematically studied. Existing magma chamber models typically consider magma chambers to be isolated melt bodies surrounded by elastic crust. In this study, we develop a physical model to account for the presence and properties of crystal mush in magma chambers and investigate its impact on the mechanical processes during and after injection of new magma. Our model assumes the magma chamber to be a spherical body consisting of a liquid core of fluid magma within a shell of crystal mush that behaves primarily as a poroelastic material. We investigate the characteristics of time‐dependent evolution in the magma chamber, both during and after the injection, and find that quantities such as overpressure and tensile stress continue to evolve after the injection has stopped, a feature that is absent in elastic (mushless) models. The time scales relevant to the postinjection evolution vary from hours to thousands of years, depending on the micromechanical properties of the mush, the viscosity of magma, and chamber size. We compare our poroelastic results to the behavior of a magma chamber with an effectively viscoelastic shell and find that only the poroelastic model displays a time scale dependence on the size of the chamber for any fixed mush volume fraction. This study demonstrates that crystal mush can significantly influence the mechanical behaviors of crustal magmatic reservoirs.
    Description: We thank James Rice, Tushar Mittal, Chris Huber and Helge Gonnerman for useful discussions in the early stages of this work. S. Adam Soule was supported by National Science Foundation Grant OCE‐1333492. Meghan Jones was supported by the U.S. Department of Defense through the National Defense Science and Engineering Graduate Fellowship (NDSEG) Program. The numerical codes used for computing the results in the work can be found at https://github.com/YangVol/MushyChamber.
    Description: 2019-03-30
    Keywords: Magma chamber ; Crystal mush ; Poroelasticity
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  • 76
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 123(12), (2018): 8994-9009, doi:10.1029/2018JC013800.
    Description: The North Icelandic Irminger Current (NIIC) is an important component of the Atlantic Water (AW) inflow to the Nordic Seas. In this study, both observations and a high‐resolution (1/12°) numerical model are used to investigate the seasonal to interannual variability of the NIIC and its forcing mechanisms. The model‐simulated velocity and hydrographic fields compare well with the available observations. The water mass over the entire north Icelandic shelf exhibits strong seasonal variations in both temperature and salinity, and such variations are closely tied to the AW seasonality in the NIIC. In addition to seasonal variability, there is considerable variation on interannual time scales, including a prominent event in 2003 when the AW volume transport increased by about 0.5 Sv. To identify and examine key forcing mechanisms for this event, we analyzed outputs from two additional numerical experiments: using only the seasonal climatology for buoyancy flux (the momentum case) and using only the seasonal climatology for wind stress (the buoyancy case). It is found that changes in the wind stress are predominantly responsible for the interannual variations in the AW volume transport, AW fraction in the NIIC water, and salinity. Temperature changes on the shelf, however, are equally attributable to the buoyancy flux and wind forcing. Correlational analyses indicate that the AW volume transport is most sensitive to the wind stress southwest of Iceland.
    Description: This work is supported by the U.S. National Science Foundation (NSF) under grants OCE‐1634886 (J. Zhao and J. Yang) and OCE‐1558742 (R. Pickart), and by the Bergen Research Foundation grant BFS2016REK01 (K. Våge and S. Semper). We thank Xiaobiao Xu at Florida State University for providing the initial model configuration. Comments from anonymous reviewers help to improve the manuscript. The altimeter products are produced and distributed by the Copernicus Marine and Environment Monitoring Service (CMEMS, http://www.marine.copernicus.eu). The hydrographic maps along the Hornbanki section are available at http://www.hafro.is/Sjora/.
    Description: 2019-04-11
    Keywords: Irminger Current ; Interannual ; Wind ; Numerical modeling
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  • 77
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Global Biogeochemical Cycles 33(1), (2019): 15-36, doi:10.1029/2018GB005985.
    Description: Better constraints on the magnitude of particulate export and the residence times of trace elements are required to understand marine food web dynamics, track the transport of anthropogenic trace metals in the ocean, and improve global climate models. While prior studies have been successful in constructing basin‐scale budgets of elements like carbon in the upper ocean, the cycling of particulate trace metals is poorly understood. The 238U‐234Th method is used here with data from the GP‐16 GEOTRACES transect to investigate the upper ocean processes controlling the particulate export of cadmium, cobalt, and manganese in the southeastern Pacific. Patterns in the flux data indicated that particulate cadmium and cobalt behave similarly to particulate phosphorus and organic carbon, with the highest export in the productive coastal region and decreasing flux with depth due to remineralization. The export of manganese was influenced by redox conditions at the low oxygen coastal stations and by precipitation and/or scavenging elsewhere. Residence times with respect to export (total inventory divided by particulate flux) for phosphorus, cadmium, cobalt, and manganese in the upper 100 and 200 m were determined to be on the order of months to years. These GEOTRACES‐based synthesis efforts, combining a host of concentration and tracer data with unprecedented resolution, will help to close the oceanic budgets of trace metals.
    Description: This work was supported by the National Science Foundation (OCE‐1232669 and OCE‐1518110), and Erin Black was also funded by a NASA Earth and Space Science Graduate Fellowship (NNX13AP31H). The authors would like to thank the captain, crew, and scientists aboard the R/V Thomas G. Thompson. A special thanks to two anonymous reviewers and Virginie Sanial for providing the additional 228Ra‐based estimates for Cd. All original data have been made available in either the supporting information or through BCO‐DMO (see Website and Database References).
    Description: 2019-06-10
    Keywords: Tthorium ; Export ; Trace metals ; Residence time
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  • 78
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in in Geophysical Research Letters, 45(22), (2018): 12350-12358. doi: 10.1029/2018GL080763.
    Description: Recent acceleration of Greenland's ocean‐terminating glaciers has substantially amplified the ice sheet's contribution to global sea level. Increased oceanic melting of these tidewater glaciers is widely cited as the likely trigger, and is thought to be highest within vigorous plumes driven by freshwater drainage from beneath glaciers. Yet melting of the larger part of calving fronts outside of plumes remains largely unstudied. Here we combine ocean observations collected within 100 m of a tidewater glacier with a numerical model to show that unlike previously assumed, plumes drive an energetic fjord‐wide circulation which enhances melting along the entire calving front. Compared to estimates of melting within plumes alone, this fjord‐wide circulation effectively doubles the glacier‐wide melt rate, and through shaping the calving front has a potential dynamic impact on calving. Our results suggest that melting driven by fjord‐scale circulation should be considered in process‐based projections of Greenland's sea level contribution.
    Description: Support was provided by the National Science Foundation (NSF) through PLR‐1418256 and PLR‐1744835, and through Woods Hole Oceanographic Institution (WHOI) Ocean and Climate Change Institute (OCCI) and the Clark Foundation. This work was also supported by a UK Natural Environmental Research Council (NERC) PhD studentship (NE/L501566/1) and Scottish Alliance for Geoscience, Environment & Society (SAGES) early career research exchange funding to D. A. S. We thank Hanumant Singh, Laura Stevens, Ken Mankoff, Rebecca Jackson, and Jeff Pietro for useful discussions and data collection.
    Description: 2019-05-15
    Keywords: Tidewater glaciers ; Ice‐ocean interactions ; Submarine melting ; Greenland ice sheet ; Fjords ; Plumes
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  • 79
    Publication Date: 2022-10-26
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Farfan, G. A., Cordes, E. E., Waller, R. G., DeCarlo, T. M., & Hansel, C. M. (2018). Mineralogy of deep-sea coral aragonites as a function of aragonite saturation state. Frontiers in Marine Science, 5, (2018): 473. doi:10.3389/fmars.2018.00473.
    Description: In an ocean with rapidly changing chemistry, studies have assessed coral skeletal health under projected ocean acidification (OA) scenarios by characterizing morphological distortions in skeletal architecture and measuring bulk properties, such as net calcification and dissolution. Few studies offer more detailed information on skeletal mineralogy. Since aragonite crystallography will at least partially govern the material properties of coral skeletons, such as solubility and strength, it is important to understand how it is influenced by environmental stressors. Here, we take a mineralogical approach using micro X-ray diffraction (XRD) and whole pattern Rietveld refinement analysis to track crystallographic shifts in deep-sea coral Lophelia pertusa samples collected along a natural seawater aragonite saturation state gradient (Ωsw = 1.15–1.44) in the Gulf of Mexico. Our results reveal statistically significant linear relationships between rising Ωsw and increasing unit cell volume driven by an anisotropic lengthening along the b-axis. These structural changes are similarly observed in synthetic aragonites precipitated under various saturation states, indicating that these changes are inherent to the crystallography of aragonite. Increased crystallographic disorder via widening of the full width at half maximum of the main (111) XRD peaks trend with increased Ba substitutions for Ca, however, trace substitutions by Ba, Sr, and Mg do not trend with crystal lattice parameters in our samples. Instead, we observe a significant trend of increasing calcite content as a function of both decreasing unit cell parameters as well as decreasing Ωsw. This may make calcite incorporation an important factor to consider in coral crystallography, especially under varying aragonite saturation states (ΩAr). Finally, by defining crystallography-based linear relationships between ΩAr of synthetic aragonite analogs and lattice parameters, we predict internal calcifying fluid saturation state (Ωcf = 11.1–17.3 calculated from b-axis lengths; 15.2–25.2 calculated from unit cell volumes) for L. pertusa, which may allow this species to calcify despite the local seawater conditions. This study will ideally pave the way for future studies to utilize quantitative XRD in exploring the impact of physical and chemical stressors on biominerals.
    Description: Funding for this project was made possible by Mineralogical Society of America Edward H. Kraus Crystallographic Research Fund and the WHOI Ocean Ventures Fund. GF was supported by a National Science Foundation Graduate Research Fellowship grant no. 1122374 and a Ford Foundation Dissertation Fellowship. Sample collections from RW were funded under NSF grant nos. 1245766 and 1127582 and NOAA Ocean Exploration Deep Atlantic Stepping Stones. Collections from the Gulf of Mexico were supported by NSF BIO-OCE grant #1220478 to EC.
    Keywords: Deep-sea corals ; Lophelia pertusa ; Crystallography ; Mineralogy ; X-ray diffraction ; Ocean acidification ; Aragonite saturation state ; Aragonite
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  • 80
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Crustal magmatic system beneath the East Pacific Rise (8°200 to 10°100N): Implications for tectonomagmatic segmentation and crustal melt transport at fast-spreading ridges. Geochemistry, Geophysics, Geosystems, 19, (2018): 4584–4611, doi: 10.1029/2018GC007590 .
    Description: Detailed images of the midcrustal magmatic system beneath the East Pacific Rise (8°20′–10°10′N) are obtained from 2‐D and 3‐D‐swath processing of along axis seismic data and are used to characterize properties of the axial crust, cross‐axis variations, and relationships with structural segmentation of the axial zone. Axial magma lens (AML) reflections are imaged beneath much of the ridge axis (mean depth 1,640 ± 185 m), as are deeper sub‐AML (SAML) reflections (brightest events ~100–800 m below AML). Local shallow regions in the AML underlie two regions of shallow seafloor depth from 9°40′–55′N and 8°26′–33′N. Enhanced magma replenishment at present beneath both sites is inferred and may be linked to nearby off‐axis volcanic chains. SAML reflections, which are observed primarily from 9°20′ to 10°05′N, indicate a finely segmented magma reservoir similar to the AML above, composed of subhorizontal, 2‐ to 7 km‐long AML segments, often with stepwise changes in reflector depth from one segment to the next. We infer that these melt bodies are related to short‐lived melt instability zones. In many locations including where seismic constraints are strongest the intermediate scale (~15–40 km) structural segmentation of the ridge axis identified in this region coincides with (1) changes in average thickness of layer 2A (by 10%–15%), (2) changes in average depth of AML (〈100 m), and (3) with the spacing of punctuated low velocity zones mapped in the uppermost mantle. The ~6 km dominant length of multiple AML segments within each of the larger structural segments may reflect the spacing of local sites of ascending magma from discrete melt reservoirs pooled beneath the crust.
    Description: We thank the crew of the MGL0812 expedition aboard R/V Marcus G. Langseth. Special thanks to the Captain M. Landow and technical staff led by R. Steinhaus and Science Officer A. Johnson for their efforts that led to a successful research cruise. We are grateful to D. J. Fornari, D.R. Toomey, and an anonymous reviewer for their comments and suggestions that significantly improved the manuscript. Seismic data from this study are archived with the IEDA MGDS (Mutter et al., 2008) and Academic Suport Portal (ASP) at UTIG (Marjanović et al., 2018). We would also like to thank Vicki Ferrini for Matlab code for manipulating data grids. Software packages Focus and VoxelGeo by Paradigm Geophysical were used for seismic data processing and interpretation. This research was supported by NSF awards OCE0327872 to J. C. M. and S. M. C., OCE‐0327885 to J. P. C., and OCE0624401 to M. R. N.
    Description: 2019-05-06
    Keywords: Mid‐ocean ridges ; Multichannel seismic data ; Tectonomagmatic segmentation ; Melt transport ; East Pacific Rise
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  • 81
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 46(1), (2018): 293-302, doi:10.1029/2018GL080956.
    Description: Ground‐breaking measurements from the ocean observatories initiative Irminger Sea surface mooring (60°N, 39°30′W) are presented that provide the first in situ characterization of multiwinter surface heat exchange at a high latitude North Atlantic site. They reveal strong variability (December 2014 net heat loss nearly 50% greater than December 2015) due primarily to variations in frequency of intense short timescale (1–3 days) forcing. Combining the observations with the new high resolution European Centre for Medium Range Weather Forecasts Reanalysis 5 (ERA5) atmospheric reanalysis, the main source of multiwinter variability is shown to be changes in the frequency of Greenland tip jets (present on 15 days in December 2014 and 3 days in December 2015) that can result in hourly mean heat loss exceeding 800 W/m2. Furthermore, a new picture for atmospheric mode influence on Irminger Sea heat loss is developed whereby strongly positive North Atlantic Oscillation conditions favor increased losses only when not outweighed by the East Atlantic Pattern.
    Description: We are grateful to Meric Srokosz and the two reviewers for helpful comments on this work. S. J. acknowledges the U.K. Natural Environment Research Council ACSIS programme funding (Ref. NE/N018044/1). M. O. acknowledges support from EU Horizon 2020 projects AtlantOS (grant 633211) and Blue Action (grant 727852). G. W. K. M. acknowledges support from the Natural Sciences and Engineering Research Council of Canada. Support for the Irminger Sea array of the ocean observatories initiative (OOI) came from the U.S. National Science Foundation. Thanks to the WHOI team and ships' officers and crew for the field deployments and to Nan Galbraith for processing the data and computing the air‐sea fluxes. Support for this processing, and making available and sharing the OOI data, came from the National Science Foundation under a Collaborative Research: Science Across Virtual Institutes grant (82164000) to R. A. W. Data used are available from the following sites: NOAA Climate Prediction Center NAO and EAP indices ftp://ftp.cpc.ncep.noaa.gov/wd52dg/data/indices/tele_index.nh, ECMWF Reanalysis 5 (ERA5) https://www.ecmwf.int/en/forecasts/datasets/archive‐datasets/reanalysis/datasets/era5, and ocean observatories initiative Irminger Mooring https://ooinet.oceanobservatories.org/.
    Description: 2019-06-18
    Keywords: Irminger Sea ; Air-sea interaction ; Surface heat flux ; Atmospheric modes ; Surface flux mooring ; Atmospheric reanalysis
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  • 82
    Publication Date: 2022-10-26
    Description: © The Authors, 2017. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Pascual, A., Ruiz, S., Olita, A., Troupin, C., Claret, M., Casas, B., Mourre, B., Poulain, P. M., Tovar-Sanchez, A., Capet, A., Mason, E., Allen, J. T., Mahadevan, A., & Tintore, J. A multiplatform experiment to unravel meso- and submesoscale processes in an intense front (AlborEx). Frontiers in Marine Science, 4(39), (2017), doi:10.3389/fmars.2017.00039.
    Description: The challenges associated with meso- and submesoscale variability (between 1 and 100 km) require high-resolution observations and integrated approaches. Here we describe a major oceanographic experiment designed to capture the intense but transient vertical motions in an area characterized by strong fronts. Finescale processes were studied in the eastern Alboran Sea (Western Mediterranean) about 400 km east of the Strait of Gibraltar, a relatively sparsely sampled area. In-situ systems were coordinated with satellite data and numerical simulations to provide a full description of the physical and biogeochemical variability. Hydrographic data confirmed the presence of an intense salinity front formed by the confluence of Atlantic Waters, entering from Gibraltar, with the local Mediterranean waters. The drifters coherently followed the northeastern limb of an anticyclonic gyre. Near real time data from acoustic current meter data profiler showed consistent patterns with currents of up to 1 m/s in the southern part of the sampled domain. High-resolution glider data revealed submesoscale structures with tongues of chlorophyll-a and oxygen associated with the frontal zone. Numerical results show large vertical excursions of tracers that could explain the subducted tongues and filaments captured by ocean gliders. A unique aspect of AlborEx is the combination of high-resolution synoptic measurements of vessel-based measurements, autonomous sampling, remote sensing and modeling, enabling the evaluation of the underlying mechanisms responsible for the observed distributions and biogeochemical patchiness. The main findings point to the importance of fine-scale processes enhancing the vertical exchanges between the upper ocean and the ocean interior.
    Description: The AlborEx experiment was conducted in the framework of PERSEUS EU-funded project (Grant agreement no: 287600). The experiment was led by the Spanish National Research Council (CSIC) institution with strong involvement and cooperation from other national and international partners: Balearic Islands Coastal Observing and Forecasting System (SOCIB, Spain); Consiglio Nazionale delle Ricerche (CNR, Italy), McGill University (Canada); Istituto Nazionale di Oceanografia e di Geofisica Sperimentale (OGS, Italy) and Woods Hole Oceanographic Institution (WHOI, USA). Glider operations were partially funded by JERICO FP7 project. AP acknowledges support from the Spanish National Research Program (E-MOTION/CTM2012-31014 and PRE-SWOT/CTM2016-78607-P). SR and AP are also supported by the Copernicus Marine Environment Monitoring Service (CMEMS) MedSUB project. EM is supported by a post-doctoral grant from the Conselleria d'Educació, Cultura i Universitats del Govern de les Illes Balears (Mallorca, Spain) and the European Social Fund. AC is a FNRS researcher under the FNRS BENTHOX project (Convention T.1009.15). The altimeter products were produced by Ssalto/Duacs and distributed by CMEMS. The profiling floats and some drifters were contributed by the Argo-Italy program. The authors are in debt with A. Massanet, F. Margirier, M. Palmer, C. Castilla, P. Balaguer and for their efficient work and implication during the AlborEx cruise. We also thank M. Menna, G. Notarstefano and A. Bussani for their help with the drifter and float data processing and the production of some figures. This article was initiated during a research visit of the first two authors to Woods Hole Oceanographic Institution.
    Keywords: Mesoscale ; Submesoscale ; Ocean front ; Western Mediterranean ; Integrated multidisciplinary ocean observations ; Multiplatform ; Numerical simulations
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  • 83
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Solid Earth 124(1), (2019): 631-657, doi:10.1029/2018JB016598.
    Description: Lithospheric seismic anisotropy illuminates mid‐ocean ridge dynamics and the thermal evolution of oceanic plates. We utilize short‐period (5–7.5 s) ambient‐noise surface waves and 15‐ to 150‐s Rayleigh waves measured across the NoMelt ocean‐bottom array to invert for the complete radial and azimuthal anisotropy in the upper ∼35 km of ∼70‐Ma Pacific lithospheric mantle, and azimuthal anisotropy through the underlying asthenosphere. Strong azimuthal variations in Rayleigh‐ and Love‐wave velocity are observed, including the first clearly measured Love‐wave 2θ and 4θ variations. Inversion of averaged dispersion requires radial anisotropy in the shallow mantle (2‐3%) and the lower crust (4‐5%), with horizontal velocities (VSH) faster than vertical velocities (VSV). Azimuthal anisotropy is strong in the mantle, with 4.5–6% 2θ variation in VSV with fast propagation parallel to the fossil‐spreading direction (FSD), and 2–2.5% 4θ variation in VSH with a fast direction 45° from FSD. The relative behavior of 2θ, 4θ, and radial anisotropy in the mantle are consistent with ophiolite petrofabrics, linking outcrop and surface‐wave length scales. VSV remains fast parallel to FSD to ∼80 km depth where the direction changes, suggesting spreading‐dominated deformation at the ridge. The transition at ∼80 km perhaps marks the dehydration boundary and base of the lithosphere. Azimuthal anisotropy strength increases from the Moho to ∼30 km depth, consistent with flow models of passive upwelling at the ridge. Strong azimuthal anisotropy suggests extremely coherent olivine fabric. Weaker radial anisotropy implies slightly nonhorizontal fabric or the presence of alternative (so‐called E‐type) peridotite fabric. Presence of radial anisotropy in the crust suggests subhorizontal layering and/or shearing during crustal accretion.
    Description: We thank the captain, crew, and engineers of the R/V Marcus G. Langseth for making the data collection possible. OBS were provided by Scripps Institution of Oceanography via the Ocean Bottom Seismograph Instrument Pool (http://www.obsip.org), which is funded by the National Science Foundation. All waveform data used in this study are archived at the IRIS Data Management Center (http://www.iris.edu) with network code ZA for 2011–2013, and all OBS orientations are included in Table S1. The 1‐D transversely isotropic and azimuthally anisotropic models and their uncertainties from this study can be found in the supporting information. This work was supported by NSF grants OCE‐0928270 and OCE‐1538229 (J. B. Gaherty), EAR‐1361487 (G. Hirth), and OCE‐0938663 (D. Lizarralde, J. A. Collins, and R. L. Evans), and an NSF Graduate Research Fellowship DGE‐16‐44869 to J. B. Russell. The authors thank the editor as well as reviewers Donald Forsyth, Hitoshi Kawakatsu, and Thorsten Becker for their constructive comments, which significantly improved this manuscript. J. B. Russell thanks Natalie J. Accardo for kindly sharing codes and expertise that contributed greatly to the analysis.
    Description: 2019-06-26
    Keywords: Seismic anisotropy ; Ambient‐noise tomography ; Oceanic lithosphere ; Love‐wave anisotropy ; Surface waves
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  • 84
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geochemistry Geophysics Geosystems 20(1), (2019): 46-66, doi: 10.1029/2018GC007512.
    Description: This study reports the composition of the oceanic crust from the 16.5°N region of the Mid‐Atlantic Ridge, a spreading ridge segment characterized by a complex detachment fault system and three main oceanic core complexes (southern, central, and northern OCCs). Lithologies recovered from the core complexes include both greenschist facies and weathered pillow basalt, diabase, peridotite, and gabbro, while only weathered and fresh pillow basalt was dredged from the rift valley floor. The gabbros are compositionally bimodal, with the magmatic crust in the region formed by scattered intrusions of chemically primitive plutonic rocks (i.e., dunites and troctolites), associated with evolved oxide‐bearing gabbros. We use thermodynamic models to infer that this distribution is expected in regions where small gabbroic bodies are intruded into mantle peridotites. The occurrence of ephemeral magma chambers located in the lithospheric mantle enables large proportions of the melt to be erupted after relatively low degrees of fractionation. A large proportion of the dredged gabbros reveal evidence for deformation at high‐temperature conditions. In particular, chemical changes in response to deformation and the occurrence of very high‐temperature ultramylonites (〉1000 °C) suggest that the deformation related to the oceanic detachment commenced at near‐solidus conditions. This event was likely associated with the expulsion of interstitial, evolved magmas from the crystal mush, a mechanism that enhanced the formation of disconnected oxide‐gabbro seams or layers often associated with crystal‐plastic fabrics in the host gabbros. This granulite‐grade event was soon followed by hydrothermal alteration revealed by the formation of amphibole‐rich veins at high‐temperature conditions (~900 °C).
    Description: The geochemical data used in this study and the parameters of the model are included as Tables in the supporting information. The data published will be contributed to the Petrological Database (www.earthchem.org/petdb). We thank the captain and crew of the R/V Knorr for their help and enthusiasm during our cruise to the 16.5° core complexes. Deborah Smith served as best chief scientist ever. Hans Schouten and Joe Cann kept H. J. B. D. in line and together with Vincent Salters, Ross Parnell‐Turner, Fuwu Ji, Dana Yoerger, Camilla Palmiotto, A. Zheleznov, H. L. Bai, and Will Junkin interpreted the geophysical data and described the rock samples on which this paper is based. A. S. was financially supported with an InterRidge fellowship and by the Societa' Italiana di Minerlogia e Petrografia. H. R. M. acknowledges support from the Wilhelm und Else Heraeus Stiftung. H. J. B. D. acknowledges support from the National Science Foundation grants MG&G 1155650 and MG&G 1434452, and discussions and assistance in the laboratory from Ma Qiang. Fuwu Ji, Joe Cann, Deborah Smith, Hans Schouten, and Ross Parnell‐Turner assisted in dredging, sample description, and provide the authors with considerable insight into the geologic and geophysical data collected during the Knorr cruise 210 Leg 5. Comments by E. Rampone, G Ceuleneer, and an anonymous reviewer improved the quality of the manuscript.
    Description: 2019-06-05
    Keywords: Gabbro ; Detachment ; Oceanic core complex ; Melt‐rock reactions ; Lower oceanic crust
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  • 85
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 53(3), (2019): 1639-1649, doi:10.1029/2018JC014454.
    Description: Circulation patterns over the inner continental shelf can be spatially complex and highly variable in time. However, few studies have examined alongshore variability over short scales of kilometers or less. To observe inner‐shelf bottom temperatures with high (5‐m) horizontal resolution, a fiber‐optic distributed temperature sensing system was deployed along a 5‐km‐long portion of the 15‐m isobath within a larger‐scale mooring array south of Martha's Vineyard, MA. Over the span of 4 months, variability at a range of scales was observed along the cable over time periods of less than a day. Notably, rapid cooling events propagated down the cable away from a tidal mixing front, showing that propagating fronts on the inner shelf can be generated locally near shallow bathymetric features in addition to remote offshore locations. Propagation velocities of observed fronts were influenced by background tidal currents in the alongshore component and show a weak correlation with theoretical gravity current speeds in the cross‐shore component. These events provide a source of cold, dense water into the inner shelf. However, differences in the magnitude and frequency of cooling events at sites separated by a few kilometers in the alongshore direction suggest that the characteristics of small‐scale variability can vary dramatically and can result in differential fluxes of water, heat, and other tracers. Thus, under stratified conditions, prolonged subsurface observations with high spatial and temporal resolution are needed to characterize the implications of three‐dimensional circulation patterns on exchange, especially in regions where the coastline and isobaths are not straight.
    Description: Deployment of the DTS system was made possible by the Center for Transformative Environmental Monitoring Programs (CTEMPS), with input, assistance, and software provided by John Selker, Scott Tyler, Paul Wetzel, Mark Hausner, and Scott Kobs. The authors thank Hugh Popenoe, Jared Schwartz, and Brian Guest for their technical expertise and effort with setup, deployment, and recovery of the DTS system, as well as the captains and crew of the R/V Discovery and R/V Tioga. Janet Fredericks assisted with integrating the DTS measurements with Martha's Vineyard Coastal Observatory infrastructure. Steve Lentz was instrumental in the design and deployment of the ISLE mooring array. Craig Marquette provided invaluable expertise and effort in the deployment of the ISLE mooring array. The authors thank Greg Gerbi for providing velocity data at site H and Malcolm Scully for providing velocity and near‐bottom temperature data at site E. Kenneth Brink and two anonymous reviewers provided valuable comments on the manuscript. DTS measurements were supported by the Woods Hole Oceanographic Institution. The ISLE project is supported by NSF (OCE‐83264600). T. Connolly acknowledges support from NSF (OCE‐1433716) and a WHOI postdoctoral scholarship funded by the U.S. Geological Survey and the WHOI Coastal Ocean Institute. DTS data are available on Zenodo (Connolly & Kirincich, 2018, https://doi.org/10.5281/zenodo.1136113). ISLE mooring data are available on the WHOI Open Access Data Server (Kirincich & Lentz, 2017b, https://doi.org/10.1575/1912/8740).
    Description: 2019-06-28
    Keywords: Inner shelf ; Alongshore variability ; Fronts ; Distributed temperature sensing
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  • 86
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(2), (2019): 1322-1330, doi:10.1029/2018JC014106.
    Description: A Lagrangian model is constructed for a surface column of initial height h(0) that propagates at an average speed u and is subject to excess (i.e., net) evaporation of q m/year. It is shown that these parameters combine to form an evaporation length, L = uh(0)/q, which provides an estimate for the distance the column must travel before evaporating completely. While these changes in the surface water level due to evaporation are compensated by entrainment of water into the overall column, the changes in either near‐surface salinity or isotopic compositions are retained and can be measured. Observations of surface salinity and isotopic compositions of δ18O and δD along 1,000‐ to 3,500‐km long transects are used to estimate values of L in the Red Sea, Mediterranean Sea, Indian Ocean, and Gulf Stream. The variations of salinity, δ18O and δD in all four basins are linear. As anticipated, the estimated value of L is smallest in the slowly moving and arid Red Sea and is greatest in the fast‐moving Gulf Stream.
    Description: The salinity and δ18O data collected aboard the Indian Ocean cruise described in Srivastava et al. (2007) can be accessed at this website (https://www.nodc.noaa.gov). The salinity, δ18O and δD data collected during the Red Sea cruise of the Interuniversity Institute for Marine Sciences, Eilat, described in Steiner et al. (2014) and can be accessed in the supporting information section of doi: 10.1073/pnas.1414323111. H. B. acknowledges the support provided by the Eshkol Foundation of the Israel Ministry of Science.
    Description: 2019-07-26
    Keywords: Air-sea interaction ; Evaporation ; Semienclosed basins ; Salinity ; Stable isotopes ; Thermohaline circulation
    Repository Name: Woods Hole Open Access Server
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  • 87
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 46(5), (2019):2434-2448, doi:10.1029/2018GL080997.
    Description: Deep earthquakes exhibit strong variabilities in their rupture and aftershock characteristics, yet their physical failure mechanisms remain elusive. The 2018 Mw 8.2 and Mw 7.9 Tonga‐Fiji deep earthquakes, the two largest ever recorded in this subduction zone, occurred within days of each other. We investigate these events by performing waveform analysis, teleseismic P wave backprojection, and aftershock relocation. Our results show that the Mw 8.2 earthquake ruptured fast (4.1 km/s) and excited frequency‐dependent seismic radiation, whereas the Mw 7.9 earthquake ruptured slowly (2.5 km/s). Both events lasted ∼35 s. The Mw 8.2 earthquake initiated in the highly seismogenic, cold core of the slab and likely ruptured into the surrounding warmer materials, whereas the Mw 7.9 earthquake likely ruptured through a dissipative process in a previously aseismic region. The contrasts in earthquake kinematics and aftershock productivity argue for a combination of at least two primary mechanisms enabling rupture in the region.
    Description: We thank the Editor Gavin Hayes and two anonymous reviewers for their helpful comments that improved the quality of the manuscript. The seismic data were provided by Data Management Center (DMC) of the Incorporated Research Institutions for Seismology (IRIS). The facilities of IRIS Data Services, and specifically the IRIS Data Management Center, were used for access to waveforms, related metadata, and/or derived products used in this study. IRIS Data Services are funded through the Seismological Facilities for the Advancement of Geoscience and EarthScope (SAGE) Proposal of the National Science Foundation under Cooperative Agreement EAR‐1261681. W. F. acknowledges supports from the Postdoctoral Scholar Program at the Woods Hole Oceanographic Institution, with funding provided by the Weston Howland Postdoctoral Scholarship. S. S. W. and D. T. are supported by the MSU Geological Sciences Endowment.
    Description: 2019-08-20
    Keywords: Deep earthquakes ; Tonga ; Backprojection ; Source imaging
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  • 88
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Tectonics, 38(2), (2019):666-686. doi:10.1029/2018TC005246.
    Description: A magnetotelluric survey in the Barotse Basin of western Zambia shows clear evidence for thinned lithosphere beneath an orogenic belt. The uppermost asthenosphere, at a depth of 60–70 km, is highly conductive, suggestive of the presence of a small amount of partial melt, despite the fact that there is no surface expression of volcanism in the region. Although the data support the presence of thicker cratonic lithosphere to the southeast of the basin, the lithospheric thickness is not well resolved and models show variations ranging from ~80 to 150 km in this region. Similarly variable is the conductivity of the mantle beneath the basin and immediately beneath the cratonic lithosphere to the southeast, although the conductivity is required to be elevated compared to normal lithospheric mantle. In a general sense, two classes of model are compatible with the magnetotelluric data: one with a moderately conductive mantle and one with more elevated conductivities. This latter class would be consistent with the impingement of a stringer of plume‐fed melt beneath the cratonic lithosphere, with the melt migrating upslope to thermally erode lithosphere beneath the orogenic belt that is overlain by the Barotse Basin. Such processes are potentially important for intraplate volcanism and also for development or propagation of rifting as lithosphere is thinned and weakened by melt. Both models show clear evidence for thinning of the lithosphere beneath the orogenic belt, consistent with elevated heat flow data in the region.
    Description: Funding for MT acquisition and analysis was provided by the National Science Foundation grant EAR‐1010432 through the Continental Dynamics Program. The data used in this study are available for download at the IRIS Data Management Center through the DOI links cited in Jones et al. (2003–2008; https://doi.org/10.17611/DP/EMTF/SAMTEX) and Evans et al. (2012; https://doi.org/10.17611/DP/EMTF/PRIDE/ZAM). We would like to thank the field crew from the Geological Survey Department, Zambia, for their assistance in collecting data. Matthew Chamberlain, David Margolius, and Colin Skinner, formerly of Northeastern University, are also thanked for their field assistance. Data are available from the corresponding author pending their submission to the IRIS DMC repository at which point they will be publically available. This is Oklahoma State University, Boone Pickens School of Geology contribution number 2019‐99.
    Description: 2019-07-30
    Keywords: Magnetotellurics ; Resistivity ; Lithosphere ; Mobile belt
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  • 89
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(6), (2019): 3628-3644, doi:10.1029/2018JC014805.
    Description: The Arctic Ocean is experiencing profound environmental changes as the climate warms. Understanding how these changes will affect Arctic biological productivity is key for predicting future Arctic ecosystems and the global CO2 balance. Here we use in situ gas measurements to quantify rates of gross oxygen production (GOP, total photosynthesis) and net community production (NCP, net CO2 drawdown by the biological pump) in the mixed layer in summer or fall from 2011 to 2016 in the Beaufort Gyre. NCP and GOP show spatial and temporal variations with higher values linked with lower concentrations of sea ice and increased upper ocean stratification. Mean rates of GOP range from 8 ± 1 to 54 ± 9 mmol O2·m−2·d−1 with the highest mean rates occurring in summer of 2012. Mean rates of NCP ranged from 1.3 ± 0.2 to 2.9 ± 0.5 mmol O2·m−2·d−1. The mean ratio of NCP/GOP, a measure of how efficiently the ecosystem is recycling its nutrients, ranged from 0.04 to 0.17, similar to ratios observed at lower latitudes. Additionally, a large increase in total photosynthesis that occurred in 2012, a year of historically low sea ice coverage, persisted for many years. Taken together, these data provide one of the most complete characterizations of interannual variations of biological productivity in this climatically important region, can serve as a baseline for future changes in rates of production, and give an intriguing glimpse of how this region of the Arctic may respond to future lack of sea ice.
    Description: We sincerely thank the scientific teams of Fisheries and Oceans Canada's Joint Ocean Ice Studies expedition and Woods Hole Oceanographic Institution's Beaufort Gyre Observing System. The hydrographic, nutrient, and chlorophyll data were collected and made available by the Beaufort Gyre Exploration Program based at the Woods Hole Oceanographic Institution (http://www.whoi.edu/beaufortgyre) in collaboration with researchers from Fisheries and Oceans Canada at the Institute of Ocean Sciences. We thank the captains and crews of the Canadian icebreaker CCGS Louis S. St‐Laurent and Mike Dempsey for sample collection. This paper was improved by the suggestions of Michael DeGrandpre and one anonymous reviewer. We are grateful to Qing Wang at Wellesley College for her assistance with statistics. We thank our funding sources: the National Science Foundation (NSF 1547011, NSF 1302884, NSF 1719280, NSF 1643735) and the support of Fisheries and Oceans Canada. Data presented and discussed in this paper can be found in the Arctic Data Center (http://10.18739/A2W389).
    Description: 2019-10-30
    Keywords: Oxygen ; Argon ; Gross primary production ; Net community production ; Sea ice ; Triple oxygen isotopes
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  • 90
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters, 46(12), (2019): 6644-6652, doi:10.1029/2019GL082842.
    Description: Understanding deformation in ice shelves is necessary to evaluate the response of ice shelves to thinning. We study microseismicity associated with ice shelf deformation using nine broadband seismographs deployed near a rift on the Ross Ice Shelf. From December 2014 to November 2016, we detect 5,948 icequakes generated by rift deformation. Locations were determined for 2,515 events using a least squares grid‐search and double‐difference algorithms. Ocean swell, infragravity waves, and a significant tsunami arrival do not affect seismicity. Instead, seismicity correlates with tidal phase on diurnal time scales and inversely correlates with air temperature on multiday and seasonal time scales. Spatial variability in tidal elevation tilts the ice shelf, and seismicity is concentrated while the shelf slopes downward toward the ice front. During especially cold periods, thermal stress and embrittlement enhance fracture along the rift. We propose that thermal stress and tidally driven gravitational stress produce rift seismicity with peak activity in the winter.
    Description: NSF grants PLR‐1142518, 1141916, and 1142126 supported S. D. Olinger and D. A. Wiens, R. C. Aster, and A. A. Nyblade respectively. NSF grant PLR‐1246151 supported P. D. Bromirski, P. Gerstoft, and Z. Chen. NSF grant OPP‐1744856 and CAL‐DPR‐C1670002 also supported P. D. Bromirski. NSF grant PLR‐1246416 supported R. A. Stephen. The Incorporated Research Institutions for Seismology (IRIS) and the PASSCAL Instrument Center at New Mexico Tech provided seismic instruments and deployment support. The RIS seismic data (network code XH) are archived at the IRIS Data Management Center (http://ds.iris.edu/ds/nodes/dmc/). S. D. Olinger catalogued and located icequakes, analyzed seismicity and environmental forcing, and drafted the manuscript. D. A. Wiens and B. P. Lipovsky provided significant contributions to the analysis and interpretation of results and to the manuscript text. D. A. Wiens, R. C. Aster, A. A. Nyblade, R. A. Stephen, P. Gerstoft, and P. D. Bromirski collaborated to design and obtain funding for the deployment. D. A. Wiens, R. C. Aster, R. A. Stephen, P. Gerstoft, P. D. Bromirski, and Z. Chen deployed and serviced seismographs in Antarctica. All authors provided valuable feedback, comments, and edits to the manuscript text. Special thanks to Patrick Shore for guidance throughout the research process.
    Description: 2019-11-23
    Keywords: Ross Ice Shelf ; Glacial seismology ; Glaciology ; Ice shelf rifting ; Antarctica
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  • 91
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Mulholland, M. R., Bernhardt, P. W., Widner, B. N., Selden, C. R., Chappell, P. D., Clayton, S., Mannino, A., & Hyde, K. High rates of N-2 fixation in temperate, western North Atlantic coastal waters expand the realm of marine diazotrophy. Global Biogeochemical Cycles, 33(7), (2019): 826-840, doi:10.1029/2018GB006130.
    Description: Dinitrogen (N2) fixation can alleviate N limitation of primary productivity by introducing fixed nitrogen (N) to the world's oceans. Although measurements of pelagic marine N2 fixation are predominantly from oligotrophic oceanic regions, where N limitation is thought to favor growth of diazotrophic microbes, here we report high rates of N2 fixation from seven cruises spanning four seasons in temperate, western North Atlantic coastal waters along the North American continental shelf between Cape Hatteras and Nova Scotia, an area representing 6.4% of the North Atlantic continental shelf area. Integrating average areal rates of N2 fixation during each season and for each domain in the study area, the estimated N input from N2 fixation to this temperate shelf system is 0.02 Tmol N/year, an amount equivalent to that previously estimated for the entire North Atlantic continental shelf. Unicellular group A cyanobacteria (UCYN‐A) were most often the dominant diazotrophic group expressing nifH, a gene encoding the nitrogenase enzyme, throughout the study area during all seasons. This expands the domain of these diazotrophs to include coastal waters where dissolved N concentrations are not always depleted. Further, the high rates of N2 fixation and diazotroph diversity along the western North Atlantic continental shelf underscore the need to reexamine the biogeography and the activity of diazotrophs along continental margins. Accounting for this substantial but previously overlooked source of new N to marine systems necessitates revisions to global marine N budgets.
    Description: Data presented in the body and supporting information of this manuscript have been deposited in the National Aeronautics and Space Administration (NASA) repository, SeaBASS and is publicly available at the following DOI address: 10.5067/SeaBASS/CLIVEC/DATA 001. This work was supported by a grant from NASA Grant Number: NNX09AE45G to M. R. M., A. M., and K. H.; a grant from NSF to P. D. C; and the Jacques S. Zaneveld and Neil and Susan Kelley Endowed Scholarships to C. S. We thank NOAA for ship time and the captain and crew of NOAA vessels Delaware II and Henry Bigelow for assistance during field sampling. Data have been submitted to SeaBASS (https://seabass.gsfc.nasa.gov/), NASA's preferred archival repository.
    Keywords: Nitrogen fixation ; Diazotrophy ; North American continental shelf
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  • 92
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in [citation], doi:[doi]. Swart, S., Gille, S. T., Delille, B., Josey, S., Mazloff, M., Newman, L., Thompson, A. F., Thomson, J., Ward, B., du Plessis, M. D., Kent, E. C., Girton, J., Gregor, L., Heil, P., Hyder, P., Pezzi, L. P., de Souza, R. B., Tamsitt, V., Weller, R. A., & Zappa, C. J. Constraining Southern Ocean air-sea-ice fluxes through enhanced observations. Frontiers in Marine Science, 6, (2019): 421, doi:10.3389/fmars.2019.00421.
    Description: Air-sea and air-sea-ice fluxes in the Southern Ocean play a critical role in global climate through their impact on the overturning circulation and oceanic heat and carbon uptake. The challenging conditions in the Southern Ocean have led to sparse spatial and temporal coverage of observations. This has led to a “knowledge gap” that increases uncertainty in atmosphere and ocean dynamics and boundary-layer thermodynamic processes, impeding improvements in weather and climate models. Improvements will require both process-based research to understand the mechanisms governing air-sea exchange and a significant expansion of the observing system. This will improve flux parameterizations and reduce uncertainty associated with bulk formulae and satellite observations. Improved estimates spanning the full Southern Ocean will need to take advantage of ships, surface moorings, and the growing capabilities of autonomous platforms with robust and miniaturized sensors. A key challenge is to identify observing system sampling requirements. This requires models, Observing System Simulation Experiments (OSSEs), and assessments of the specific spatial-temporal accuracy and resolution required for priority science and assessment of observational uncertainties of the mean state and direct flux measurements. Year-round, high-quality, quasi-continuous in situ flux measurements and observations of extreme events are needed to validate, improve and characterize uncertainties in blended reanalysis products and satellite data as well as to improve parameterizations. Building a robust observing system will require community consensus on observational methodologies, observational priorities, and effective strategies for data management and discovery.
    Description: SS was funded by a Wallenberg Academy Fellowship (WAF 2015.0186). EK was funded by the NERC ORCHESTRA Project (NE/N018095/1). LP was funded by the Advanced Studies in Oceanography of Medium and High Latitudes (CAPES 23038.004304/2014-28) and the Research Productivity Program (CNPq 304009/2016-4). BdS was a research associate at the F.R.S-FNRS. PeH was supported by the Australian Antarctic Science Projects 4301 and 4390, and the Australian Government’s Cooperative Research Centres Programme through the Antarctic Climate and Ecosystems Cooperative Research Centre and the International Space Science Institute Project 406. SG and MM were funded by National Science Foundation awards OCE-1658001 and PLR-1425989. AT was supported by NASA (NNX15AG42G) and NSF (OCE-1756956).
    Keywords: Air-sea/air-sea-ice fluxes ; Southern Ocean ; Ocean-atmosphere interaction ; Climate ; Ocean-ice interaction
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  • 93
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution-NonCommercial‐NoDerivs License. The definitive version was published in Rodriguez, L. G., Cohen, A. L., Ramirez, W., Oppo, D. W., Pourmand, A., Edwards, R. L., Alpert, A. E., & Mollica, N. Mid-Holocene, coral-based sea surface temperatures in the western tropical Atlantic. Paleoceanography and Paleoclimatology, 34(7), (2019): 1234-1245, doi:10.1029/2019PA003571.
    Description: The Holocene is considered a period of relative climatic stability, but significant proxy data‐model discrepancies exist that preclude consensus regarding the postglacial global temperature trajectory. In particular, a mid‐Holocene Climatic Optimum, ~9,000 to ~5,000 years BP, is evident in Northern Hemisphere marine sediment records, but its absence from model simulations raises key questions about the ability of the models to accurately simulate climate and seasonal biases that may be present in the proxy records. Here we present new mid‐Holocene sea surface temperature (SST) data from the western tropical Atlantic, where twentieth‐century temperature variability and amplitude of warming track the twentieth‐century global ocean. Using a new coral thermometer Sr‐U, we first developed a temporal Sr‐U SST calibration from three modern Atlantic corals and validated the calibration against Sr‐U time series from a fourth modern coral. Two fossil corals from the Enriquillo Valley, Dominican Republic, were screened for diagenesis, U‐series dated to 5,199 ± 26 and 6,427 ± 81 years BP, respectively, and analyzed for Sr/Ca and U/Ca, generating two annually resolved Sr‐U SST records, 27 and 17 years long, respectively. Average SSTs from both corals were significantly cooler than in early instrumental (1870–1920) and late instrumental (1965–2016) periods at this site, by ~0.5 and ~0.75 °C, respectively, a result inconsistent with the extended mid‐Holocene warm period inferred from sediment records. A more complete sampling of Atlantic Holocene corals can resolve this issue with confidence and address questions related to multidecadal and longer‐term variability in Holocene Atlantic climate.
    Description: This study was supported by NSF OCE 1747746 to Anne Cohen and by NSF OCE 1805618 to Anne Cohen and Delia Oppo. Eric Loss and his crew on Pangaea Exploration's Sea Dragon enabled fieldwork in Martinique, and George P. Lohman, Thomas DeCarlo, and Hanny Rivera assisted with coral coring. Kathryn Pietro and Julia Middleton assisted in the laboratory, and Louis Kerr provided technical support on the SEM at MBL. Gretchen Swarr provided technical support on the Element and iCap ICPMS at WHOI. We also thank Edwin Hernandez, Jose Morales, and Amos Winter for discussion. All data generated in this study will be made publicly available at http://www.ncdc.noaa.gov/data‐ access/paleoclimatology‐data/datasets
    Keywords: Mid‐Holocene ; Proxy SST ; Sr‐U thermometer ; Tropical Atlantic ; Climatic Optimum ; Coral
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  • 94
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 46(14), (2019): 8252-8260, doi: 10.1029/2019GL083517.
    Description: Brothers volcano is the most hydrothermally active volcano along the Kermadec arc, with distinct hydrothermal fields located on the caldera walls and on the postcollapse volcanic cones. These sites display very different styles of hydrothermal activity in terms of temperature, gas content, fluid chemistry, and associated mineralization. Here we show the results of a systematic heat flow survey integrated with near‐seafloor magnetic data acquired using remotely operated vehicles and autonomous underwater vehicles. Large‐scale circulation is structurally controlled, with a deep (~1‐ to 2‐km depth) central recharge through the caldera floor and lateral discharge along the caldera walls and at the summits of the postcollapse cones. Shallow (~ 0.1‐0.2 km depth) circulation is characterized by small‐scale recharge zones located at a distance of ~ 0.1–0.2 km from the active vent sites.
    Description: We thank the Captains and crews of the R/V Sonne, Thompson, and Tangaroa and the engineers from Wood Hole Oceanographic Institution and MARUM for the successful operation of ABE, Sentry, Quest 4000, and Jason. The heat flow data surveys were funded by NSF grant OCE‐1558356 (PI Susan Humphris) and a grant from the German Ministry for Education and Research BMBF, project no. 03G0253A (PI Andrea Koschinsky). Funding from the New Zealand Government (Ministry of Business, Innovation and Employment) helped enable this study. This paper was significantly improved by the comments from the Editor Rebecca Carey and from two unknown reviewers. The data used in this paper can be downloaded from the U.S. Lamont‐Doherty MGDS database.
    Description: 2020-01-18
    Keywords: Brothers volcano ; IODP Expedition 376 ; Subduction‐related hydrothermal systems ; Hydrothermal circulation ; Heat flow ; Magnetic anomalies
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  • 95
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Smith, G. C., Allard, R., Babin, M., Bertino, L., Chevallier, M., Corlett, G., Crout, J., Davidson, F., Delille, B., Gille, S. T., Hebert, D., Hyder, P., Intrieri, J., Lagunas, J., Larnicol, G., Kaminski, T., Kater, B., Kauker, F., Marec, C., Mazloff, M., Metzger, E. J., Mordy, C., O'Carroll, A., Olsen, S. M., Phelps, M., Posey, P., Prandi, P., Rehm, E., Reid, P., Rigor, I., Sandven, S., Shupe, M., Swart, S., Smedstad, O. M., Solomon, A., Storto, A., Thibaut, P., Toole, J., Wood, K., Xie, J., Yang, Q., & WWRP PPP Steering Grp. Polar ocean observations: A critical gap in the observing system and its effect on environmental predictions from hours to a season. Frontiers in Marine Science, 6, (2019): 429, doi:10.3389/fmars.2019.00429.
    Description: There is a growing need for operational oceanographic predictions in both the Arctic and Antarctic polar regions. In the former, this is driven by a declining ice cover accompanied by an increase in maritime traffic and exploitation of marine resources. Oceanographic predictions in the Antarctic are also important, both to support Antarctic operations and also to help elucidate processes governing sea ice and ice shelf stability. However, a significant gap exists in the ocean observing system in polar regions, compared to most areas of the global ocean, hindering the reliability of ocean and sea ice forecasts. This gap can also be seen from the spread in ocean and sea ice reanalyses for polar regions which provide an estimate of their uncertainty. The reduced reliability of polar predictions may affect the quality of various applications including search and rescue, coupling with numerical weather and seasonal predictions, historical reconstructions (reanalysis), aquaculture and environmental management including environmental emergency response. Here, we outline the status of existing near-real time ocean observational efforts in polar regions, discuss gaps, and explore perspectives for the future. Specific recommendations include a renewed call for open access to data, especially real-time data, as a critical capability for improved sea ice and weather forecasting and other environmental prediction needs. Dedicated efforts are also needed to make use of additional observations made as part of the Year of Polar Prediction (YOPP; 2017–2019) to inform optimal observing system design. To provide a polar extension to the Argo network, it is recommended that a network of ice-borne sea ice and upper-ocean observing buoys be deployed and supported operationally in ice-covered areas together with autonomous profiling floats and gliders (potentially with ice detection capability) in seasonally ice covered seas. Finally, additional efforts to better measure and parameterize surface exchanges in polar regions are much needed to improve coupled environmental prediction.
    Description: The development of the new generation of floats (PRO-ICE) to be operated under ice was funded by the French project NAOS. Twelve PRO-ICE were funded by NAOS and nine by the Canadian Foundation for Innovation (FCI-30124). The GreenEdge project is funded by the following French and Canadian programs and agencies: ANR (Contract #111112), CNES (project #131425), IPEV (project #1164), CSA, Fondation Total, ArcticNet, LEFE and the French Arctic Initiative (GreenEdge project). The INTAROS project has received funding from the European Union’s Horizon 2020 Research and Innovation Program under grant agreement No. 727890. The setup of the ArcMBA system and the experiment described in section “Quantitative Network Design” were funded by the European Space Agency through its support to science element (contract #4000117710/16/I-NB). SSw was supported by a Wallenberg Academy Fellowship (WAF 2015.0186). The work at CLS (GL, PPr, and PT) has been funded by internal investment, in relation with on-going CNES and ESA funded studies making use of radar data over Polar regions. EMODNET (BK) is funded by the European Commission. NRL Funding (for RA, JC, DH, EM, PPo, OS) provided by NRL Research Option “Determining the Impact of Sea Ice Thickness on the Arctic’s Naturally Changing Environment (DISTANCE), ONR 6.2 Data Assimilation and under program element 0602435N (JC, RA, DH). JT’s Arctic research activities are supported by the U.S. National Science Foundation and ONR. SG was funded by NSF grants/awards PLR-1425989 and OCE 1658001. IR is funded by contributors to the US IABP (including CG, DOE, NASA, NIC, NOAA, NSF, ONR). CAFS is supported by the NOAA ESRL Physical Sciences Division (AS and JI). LB and JX are funded by CMEMS. The WWRP PPP Steering Group is funded by a WMO trust fund with support from AWI for the ICO. The publication fee is provided by ECCC.
    Keywords: Polar observations ; Operational oceanography ; Ocean data assimilation ; Ocean modeling ; Forecasting ; Sea ice ; Air-sea-ice fluxes ; YOPP
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  • 96
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 46(15), (2019): 8893-8902, doi:10.1029/2019GL084123.
    Description: Gravity waves impacting ice shelves illicit a suite of responses that can affect ice shelf integrity. Broadband seismometers deployed on the Ross Ice Shelf, complemented by a near‐icefront seafloor hydrophone, establish the association of strong icequake activity with ocean gravity wave amplitudes (AG) below 0.04 Hz. The Ross Ice Shelf‐front seismic vertical displacement amplitudes (ASV) are well correlated with AG, allowing estimating the frequency‐dependent transfer function from gravity wave amplitude to icefront vertical displacement amplitude (TGSV(f)). TGSV(f) is 0.6–0.7 at 0.001–0.01 Hz but decreases rapidly at higher frequencies. Seismicity of strong icequakes exhibits spatial and seasonal associations with different gravity wave frequency bands, with the strongest icequakes observed at the icefront primarily during the austral summer when sea ice is minimal and swell impacts are strongest.
    Description: Bromirski, Gerstoft, and Chen were supported by NSF grant PLR‐1246151. Bromirski also received support from NSF grant OPP‐1744856 and CAL‐DPR‐C1670002. Stephen, Wiens, Aster, and Nyblade were supported under NSF grants PLR‐1246416, 1142518, 1141916, and 1142126, respectively. Lee and Yun were support by a research grant from the Korean Ministry of Oceans and Fisheries (KIMST20190361; PM19020). Seismic instruments and on‐ice support were provided by the Incorporated Research Institutions for Seismology (IRIS) through the PASSCAL Instrument Center at New Mexico Tech. The RIS and KPDR seismic data are archived at the IRIS Data Management Center, http://ds.iris.edu/ds/nodes/dmc/, with network codes XH and KP, respectively. The facilities of the IRIS Consortium are supported by the National Science Foundation under Cooperative Agreement EAR‐1261681 and the DOE National Nuclear Security Administration. We thank Patrick Shore, Michael Baker, Cai Chen, Robert Anthony, Reinhard Flick, Jerry Wanetick, Weisen Shen, Tsitsi Madziwa Nussinov, and Laura Stevens for their help with field operations. Logistical support from the U.S. Antarctica Program and staff at McMurdo Station was critical and is much appreciated.
    Description: 2020-02-01
    Keywords: Icequake ; Ice shelf ; Gravity wave ; Transfer function
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  • 97
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Palmer, M. D., Durack, P. J., Paz Chidichimo, M., Church, J. A., Cravatte, S., Hill, K., Johannessen, J. A., Karstensen, J., Lee, T., Legler, D., Mazloff, M., Oka, E., Purkey, S., Rabe, B., Sallee, J., Sloyan, B. M., Speich, S., von Schuckmann, K., Willis, J., & Wijffels, S. Adequacy of the ocean observation system for quantifying regional heat and freshwater storage and change. Frontiers in Marine Science, 6, (2019): 16, doi: 10.3389/fmars.2019.00416.
    Description: Considerable advances in the global ocean observing system over the last two decades offers an opportunity to provide more quantitative information on changes in heat and freshwater storage. Variations in these storage terms can arise through internal variability and also the response of the ocean to anthropogenic climate change. Disentangling these competing influences on the regional patterns of change and elucidating their governing processes remains an outstanding scientific challenge. This challenge is compounded by instrumental and sampling uncertainties. The combined use of ocean observations and model simulations is the most viable method to assess the forced signal from noise and ascertain the primary drivers of variability and change. Moreover, this approach offers the potential for improved seasonal-to-decadal predictions and the possibility to develop powerful multi-variate constraints on climate model future projections. Regional heat storage changes dominate the steric contribution to sea level rise over most of the ocean and are vital to understanding both global and regional heat budgets. Variations in regional freshwater storage are particularly relevant to our understanding of changes in the hydrological cycle and can potentially be used to verify local ocean mass addition from terrestrial and cryospheric systems associated with contemporary sea level rise. This White Paper will examine the ability of the current ocean observing system to quantify changes in regional heat and freshwater storage. In particular we will seek to answer the question: What time and space scales are currently resolved in different regions of the global oceans? In light of some of the key scientific questions, we will discuss the requirements for measurement accuracy, sampling, and coverage as well as the synergies that can be leveraged by more comprehensively analyzing the multi-variable arrays provided by the integrated observing system.
    Description: MP was supported by the Met Office Hadley Centre Climate Programme funded by the BEIS and Defra, and the European Union’s Horizon 2020 Research and Innovation Program under grant Agreement No. 633211 (AtlantOS). The work of PD was prepared the by Lawrence Livermore National Laboratory (LLNL) under Contract DE-AC52-07NA27344 and is a contribution to the U.S. Department of Energy, Office of Science, Climate and Environmental Sciences Division, Regional and Global Modeling and Analysis Program. LLNL Release number: LLNL-JRNL-761158. BS and JC was partially supported by the Centre for Southern Hemisphere Oceans Research, a joint research center between the QNLM and the CSIRO. BS was also supported by the Australian Government Department of the Environment and CSIRO through the National Environmental Science Program. SC was supported by the IRD and by the French national program LEFE/INSU. SC thanks W. Kessler for suggestions concerning Figure 6. BR was supported by the German Alfred-Wegener-Institut Helmholtz-Zentrum für Polar-und Meeresforschung (AWI). J-BS was supported by the CNRS/INSU and the Horizon 2020 Research and Innovation Program under Grant Agreement 637770. SS was supported by the French Institutions ENS, LMD, IPSL, and CNRS/INSU. The work of JW was performed in part at the Jet Propulsion Laboratory, California Institute of Technology, under contract with the National Aeronautics and Space Administration.
    Keywords: Heat content ; Freshwater content ; Salinity ; Temperature ; Ocean observing system ; Climate change ; Climate variability ; Observing system design
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  • 98
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Centurioni, L. R., Turton, J., Lumpkin, R., Braasch, L., Brassington, G., Chao, Y., Charpentier, E., Chen, Z., Corlett, G., Dohan, K., Donlon, C., Gallage, C., Hormann, V., Ignatov, A., Ingleby, B., Jensen, R., Kelly-Gerreyn, B. A., Koszalka, I. M., Lin, X., Lindstrom, E., Maximenko, N., Merchant, C. J., Minnett, P., O'Carroll, A., Paluszkiewicz, T., Poli, P., Poulain, P., Reverdin, G., Sun, X., Swail, V., Thurston, S., Wu, L., Yu, L., Wang, B., & Zhang, D. Global in situ observations of essential climate and ocean variables at the air-sea interface. Frontiers in Marine Science, 6, (2019): 419, doi: 10.3389/fmars.2019.00419.
    Description: The air–sea interface is a key gateway in the Earth system. It is where the atmosphere sets the ocean in motion, climate/weather-relevant air–sea processes occur, and pollutants (i.e., plastic, anthropogenic carbon dioxide, radioactive/chemical waste) enter the sea. Hence, accurate estimates and forecasts of physical and biogeochemical processes at this interface are critical for sustainable blue economy planning, growth, and disaster mitigation. Such estimates and forecasts rely on accurate and integrated in situ and satellite surface observations. High-impact uses of ocean surface observations of essential ocean/climate variables (EOVs/ECVs) include (1) assimilation into/validation of weather, ocean, and climate forecast models to improve their skill, impact, and value; (2) ocean physics studies (i.e., heat, momentum, freshwater, and biogeochemical air–sea fluxes) to further our understanding and parameterization of air–sea processes; and (3) calibration and validation of satellite ocean products (i.e., currents, temperature, salinity, sea level, ocean color, wind, and waves). We review strengths and limitations, impacts, and sustainability of in situ ocean surface observations of several ECVs and EOVs. We draw a 10-year vision of the global ocean surface observing network for improved synergy and integration with other observing systems (e.g., satellites), for modeling/forecast efforts, and for a better ocean observing governance. The context is both the applications listed above and the guidelines of frameworks such as the Global Ocean Observing System (GOOS) and Global Climate Observing System (GCOS) (both co-sponsored by the Intergovernmental Oceanographic Commission of UNESCO, IOC–UNESCO; the World Meteorological Organization, WMO; the United Nations Environment Programme, UNEP; and the International Science Council, ISC). Networks of multiparametric platforms, such as the global drifter array, offer opportunities for new and improved in situ observations. Advances in sensor technology (e.g., low-cost wave sensors), high-throughput communications, evolving cyberinfrastructures, and data information systems with potential to improve the scope, efficiency, integration, and sustainability of the ocean surface observing system are explored.
    Description: LC, LB, and VH were supported by NOAA grant NA15OAR4320071 and ONR grant N00014-17-1-2517. RL was supported by NOAA/AOML and NOAA’s Ocean Observation and Monitoring Division. NM was partly supported by NASA grant NNX17AH43G. IK was supported by the Nordic Seas Eddy Exchanges (NorSEE) funded by the Norwegian Research Council (Grant 221780). DZ was partly funded by the Joint Institute for the Study of the Atmosphere and Ocean (JISAO) under NOAA Cooperative Agreement NA15OAR4320063. RJ was supported by the USACE’s Civil Works 096×3123.
    Keywords: Global in situ observations ; Air-sea interface ; Essential climate and ocean variables ; Climate variability and change ; Weather forecasting ; SVP drifters
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  • 99
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Biogeosciences 124 (2019): 2823-2850, doi:10.1029/2019JG005113.
    Description: Microscopy techniques have been widely applied to observe cellular ultrastructure. Most of these techniques, such as transmission electron microscopy, produce high‐resolution images, but they may require extensive preparation, hampering their application for in vivo examination. Other approaches, such as fluorescent and fluorogenic probes, can be applied not only to fixed specimens but also to living cells when the probes are nontoxic. Fluorescence‐based methods, which are generally relatively easy to use, allow visual and (semi)quantitative studies of the ultrastructural organization and processes of the cell under natural as well as manipulated conditions. To date, there are relatively few published studies on the nearly ubiquitous marine protistan group Foraminifera that have used fluorescent and fluorogenic probes, despite their huge potential. The aim of the present contribution is to document the feasible application of a wide array of these probes to foraminiferal biology. More specifically, we applied fluorescence‐based probes to study esterase activity, cell viability, calcium signaling, pH variation, reactive oxygen species, neutral and polar lipids, lipid droplets, cytoskeleton structures, Golgi complex, acidic vesicles, nuclei, and mitochondria in selected foraminiferal species.
    Description: The authors are very grateful to the Editor‐in‐Chief Miguel Goni and two anonymous reviewers for their thoughtful and valuable comments that have greatly improved the paper. Markus Raitzsch and Karina Kaczmarek from the AWI, Jakub Kordas from the ZOO Wrocław sp. z o. o. (Poland), and Max Janse from The Royal Burgers' Zoo (Arnhem, the Netherlands) are gratefully acknowledged. The authors declare that no competing interests exist. All the data are included within the paper or the supporting information accompanying it. The research for this paper was partially supported by the Ministero dell'Istruzione, dell'Università e della Ricerca (PRIN 2010‐2011 protocollo 2010RMTLYR) to R.C., the Japan Society for the Promotion of Science KAKENHI Grant (Numbers: JP18H06074, JP17H02978, JP19H02009, JP19H03045) to T.T. and Y.N., the WHOI Investment in Science Program to J.M.B, the Polish National Science Center (Grant DEC‐2015/19/B/ST10/01944) J.T. and J.G. and the Kuwait Foundation for the Advancement of Sciences (EM084C) to E.A‐E.
    Description: 2020-02-22
    Keywords: Protist ; Organelles ; Confocal laser scanning microscopy ; Probes ; Foraminifera
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  • 100
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(5), (2019): 3279-3297, doi: 10.1029/2019JC014988.
    Description: Radium isotopes are produced through the decay of thorium in sediments and are soluble in seawater; thus, they are useful for tracing ocean boundary‐derived inputs to the ocean. Here we apply radium isotopes to study continental inputs and water residence times in the Arctic Ocean, where land‐ocean interactions are currently changing in response to rising air and sea temperatures. We present the distributions of radium isotopes measured on the 2015 U.S. GEOTRACES transect in the Western Arctic Ocean and combine this data set with historical radium observations in the Chukchi Sea and Canada Basin. The highest activities of radium‐228 were observed in the Transpolar Drift and the Chukchi shelfbreak jet, signaling that these currents are heavily influenced by interactions with shelf sediments. The ventilation of the halocline with respect to inputs from the Chukchi shelf occurs on time scales of ≤19–23 years. Intermediate water ventilation time scales for the Makarov and Canada Basins were determined to be ~20 and 〉30 years, respectively, while deep water residence times in these basins were on the order of centuries. The radium distributions and residence times described in this study serve as a baseline for future studies investigating the impacts of climate change on the Arctic Ocean.
    Description: We thank the captain and crew of the USCGC Healy (HLY1502) and the chief scientists D. Kadko and W. Landing for coordinating a safe and successful expedition. We thank the members of the pump team, P. Lam, E. Black, S. Pike, X. Yang, and M. Heller for their assistance with sample collection and for their unfailingly positive attitudes during this 65‐day expedition. We also appreciate sampling assistance from P. Aguilar and M. Stephens, and MATLAB assistance from B. Corlett, A. Pacini, P. Lin, and M. Li. The radium data from the HLY1502 expedition are available through the Biological & Chemical Oceanography Data Management Office (https://www.bco‐dmo.org/dataset/718440) and the radium measurements from the SHEBA, AWS‐2000, and SBI expeditions can be found in the supporting information. This work was funded by NSF awards OCE‐1458305 to M.A.C., OCE‐1458424 to W.S.M., and PLR‐1504333 to R.S.P. This research was conducted with Government support under and awarded by a DoD, Air Force Office of Scientific Research, National Defense Science and Engineering Graduate (NDSEG) Fellowship awarded to L.E.K., 32 CFR 168a.
    Description: 2019-10-26
    Keywords: Radium ; Arctic Ocean ; GEOTRACES ; Chukchi shelf
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