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  • Other Sources  (697)
  • Springer  (356)
  • AGU (American Geophysical Union)  (228)
  • Wiley  (113)
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  • 2020-2023  (41)
  • 2000-2004  (655)
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  • 1
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    Springer
    In:  In: World Atlas of Submarine Gas Hydrates in Continental Margins. , ed. by Mienert, J., Berndt, C. 〈https://orcid.org/0000-0001-5055-0180〉, Tréhu, A. M., Camerlenghi, A. and Liu, C. S. Springer, Cham, pp. 451-461.
    Publication Date: 2022-01-06
    Description: The Black Sea has undergone several limnic and marine stages due to fluctuations in the global sea level. The exchange of saline water from the Mediterranean Sea to the Black Sea through the Bosporus Strait was interrupted when the sea level dropped below the Bosporus sill. This induced limnic conditions, while marine conditions were established after the reconnection to saline Mediterranean seawater. Extended river fan systems developed during sea level low-stands, providing large amounts of organic material being buried by rapid sedimentation on the slopes of the Black Sea margins. The biogenic degradation of this material produces most of the methane gas expelled into the anoxic water column today. This largely happens by ubiquitous cold vents at ~700 m water depth (i.e. at the stability boundary of methane hydrates) and by mud volcanoes in ~2000 m water depth. A significant amount of gas is expected to accumulate in the sediment within the methane hydrate stability zone. However, bottom-simulating reflectors, the seismic indicator for gas hydrates, are not found everywhere along the margin. Recent analyses of the Danube and Dniepr fans have revealed a discontinuous gas hydrate formation in an area with no active seeps, while areas of active seepage located in the vicinity of BSR reflections held no gas hydrates. In addition, the ongoing diffusion of salt into the uppermost Black Sea sediment pore space since the last glacial maximum further reduces the volume of the gas hydrate stability zone. Estimates of the total amount of gas stored in gas hydrates therefore require a detailed structural analysis prior to regional- or basin-scale modelling attempts.
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  • 2
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    Springer
    In:  In: World Atlas of Submarine Gas Hydrates in Continental Margins. , ed. by Mienert, J., Berndt, C. 〈https://orcid.org/0000-0001-5055-0180〉, Tréhu, A. M., Camerlenghi, A. and Liu, C. S. Springer, Cham, pp. 73-85.
    Publication Date: 2022-01-20
    Description: Marine electromagnetic methods provide useful and independent measures for the identification and quantification of submarine gas hydrates. The resistivity of seafloor sediments, drawn from area-wide electromagnetic data, mainly depends on the sediment porosity and the nature of the pore fluid. Gas hydrates and free gas are both electrically resistive. The replacement of saline water, thus conductive pore water with resistive gas hydrate or free gas, increases the sediment resistivity and can be used to provide accurate saturation estimates if the background lithology is known. While seismic methods are predominantly used to study the distribution of submarine gas hydrates, a growing number of global field studies have demonstrated that the joint interpretation of marine seismic and electromagnetic methods improves the evaluation of submarine gas hydrate targets. This article discusses the relationship between resistivity and free gas/gas hydrate saturation levels, how the resistivity of the sediment may be measured and summarizes the status and results of current and past field studies.
    Type: Book chapter , NonPeerReviewed
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  • 3
    Publication Date: 2022-04-29
    Description: Every year, vast quantities of plastic debris arrive at the ocean surface. Nevertheless, our understanding of plastic movements is largely incomplete and many of the processes involved with the horizontal and vertical displacement of plastics in the ocean are still basically unknown. In this chapter we review the dynamics associated with the transport of plastics and other pollutants at oceanic fronts. Fronts had been historically defined as simple barriers to exchange, but here we show that the role of these structures in influencing the transport of plastics is more complex. The tools used to investigate the occurrence of frontal structures at various spatial scales are reviewed in detail, with a particular focus on their potential applications to the study of plastic pollution. Three selected case studies are presented to better describe the role of fronts in favoring or preventing plastic exchanges: the large-scale Antarctic Circumpolar Current, a Mediterranean mesoscale front, and the submesoscale fronts in the Gulf of Mexico. Lastly, some aspects related to the vertical subduction of plastic particles at oceanic fronts are discussed as one of the most promising frontiers for future research. The accumulation of floating debris at the sea surface is mainly affected by the horizontal components of frontal dynamics. At the same time, vertical components can be relevant for the export of neutrally buoyant particles from the surface into the deep sea. Based on these evidences, we propose that submesoscale processes can provide a fast and efficient route of plastic transport within the mixed layer, while mesoscale instabilities and associated vertical velocities might be the dominant mechanism to penetrate the deeper ocean on slower but broader scales. We conclude that given the ubiquitous presence of fronts in the world’s ocean, their contribution to the global plastic cycle is probably not negligible and the role of these processes in vertically displacing neutrally buoyant microplastics should be investigated in more detail.
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  • 4
    Publication Date: 2022-05-20
    Description: The Barents Sea, located close to the Arctic Ocean, is a petroleum province featuring an extensive occurrence of gas hydrates and shallow gas in compacted sediments. Glacial erosion and uplift have contributed to the migration of gas originating from deeper rocks to the shallow sediments of this region, resulting in hydrates with higher-order hydrocarbons in addition to methane. This article documents reported gas hydrate indications and major controls on hydrate stability in the Barents Sea.
    Type: Book chapter , PeerReviewed
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  • 5
    Publication Date: 2022-05-25
    Description: Since global navigation satellite systems (GNSS) for determining the absolute geolocation do not reach into the ocean, underwater robots typically obtain a GNSS position at the water surface and then use a combination of different sensors for estimating their pose while diving, including inertial navigation, acoustic doppler velocity logs, ultra short baseline localization systems and pressure sensors. When re-navigating to the same seafloor location after several days, months or years, e.g. for coastal monitoring, the absolute uncertainty of such systems can be in the range of meters for shallow water, and tens of meters for deeper waters in practice. To enable absolute relocalization in marine data science applications that require absolute seafloor positions in the range of centimeter precision, in this contribution we suggest to equip the monitoring area with visual markers that can be detected reliably even in case they are partially overgrown or partially buried by sediment, which can happen quickly in coastal waters. Inspired by patterns successful in camera calibration, we create robust markers that exhibit features at different scales, in order to allow detection, identification and pose estimation from different cameras and various altitudes as visibility (and therefore the maximum possible survey altitude) in coastal waters can vary significantly across seasons, tides and weather. The low frequency content of the marker resembles a human-readable digit, in order to allow easy identification by scientists. We present early results including promising initial tests in coastal waters.
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  • 6
    Publication Date: 2022-06-02
    Description: While offshore groundwater has been utilized by coastal communities as far back as 1000 BC, only in the past 10 years has the global volume of fresh-to-brackish water hosted in offshore aquifers been truly appreciated. There are vast quantities (~300–500 × 103 km3) of offshore freshened groundwater sequestered in continental shelf sediments under water depths of less than 60 m within 110 km of the coastline. New marine geophysical methods now make it possible to map and quantify low salinity offshore groundwater bodies. To date, these offshore resources have not been developed. Offshore freshened groundwater could be produced if wells are located close to the shoreline and coastal desalination plants.
    Type: Book chapter , NonPeerReviewed
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  • 7
    Publication Date: 2022-07-11
    Description: Underwater images are challenging for correspondence search algorithms, which are traditionally designed based on images captured in air and under uniform illumination. In water however, medium interactions have a much higher impact on the light propagation. Absorption and scattering cause wavelength- and distance-dependent color distortion, blurring and contrast reductions. For deeper or turbid waters, artificial illumination is required that usually moves rigidly with the camera and thus increases the appearance differences of the same seafloor spot in different images. Correspondence search, e.g. using image features, is however a core task in underwater visual navigation employed in seafloor surveys and is also required for 3D reconstruction, image retrieval and object detection. For underwater images, it has to be robust against the challenging imaging conditions to avoid decreased accuracy or even failure of computer vision algorithms. However, explicitly taking underwater nuisances into account during the feature extraction and matching process is challenging. On the other hand, learned feature extraction models achieved high performance in many in-air problems in recent years. Hence we investigate, how such a learned robust feature model, D2Net, can be applied to the underwater environment and particularly look into the issue of cross domain transfer learning as a strategy to deal with the lack of annotated underwater training data.
    Type: Book chapter , NonPeerReviewed
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  • 8
    Publication Date: 2022-08-08
    Description: Fish food is an inevitable item in human consumption with healthy sourceof good quality proteins and fat. Aqua industry can help to improve food security,livelihoods for the poorest and to meet the world’s food demands. But producingmore seafood that is at affordable cost with rich nutrition is challenging for aquaindustry. Many factors affect the productivity of aqua industry; one such an impor-tant constraint is bacterial diseases. Hence, Aqua industry, a booming businesssector, immensely requires continued research with scientific and technical devel-opments, and innovations. Study of bacterialfish disease is one such thrust areawhich requires intense research to understand the causes and control bacterialdiseases infish. The appearance and development of afish disease is the result ofthe interaction among pathogen, host and environment. An insight into bacterialfishdiseases, clinical symptoms and treatment may help to manage the bacterial diseasesand so can make aqua industry a more profitablefield. This chapter deals withdifferent aspects of the most threatening bacterial diseases, occurring in farmedfishes and also in wildfishes, which are results infish loss and economic lossworldwide. A wide range of gram positive and gram-negative bacteria causingbacterial diseases, clinical symptoms, diagnosis, treatment, vaccines and the natureof water habitat are also discussed in this chapter.
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  • 9
    Publication Date: 2022-08-12
    Description: The Digital Earth project aimed for the integration of data science and Earth science. Here, we reflect on the main lessons learned that include the need for interdisciplinary collaboration, thinking out of the box, the concept of ‘thinking in workflows’ and models for the sustainable implementation of scientific software, data infrastructure and policies.
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  • 10
    Publication Date: 2022-08-12
    Description: Digital Earth is a project funded by the German Helmholtz Association with all centers of the research field Earth and Environment involved. The main goal of the Digital Earth project is to develop and bundle data science methods in extendable and maintainable scientific workflows that enable natural scientists in collaboration with data scientists to achieve a deeper understanding of the Earth system. This has been achieved by developing solutions for data analysis and exploration with visual and computational approaches with data obtained in a SMART monitoring approach and modeling studies, accompanied by a continuous evaluation of the collaboration processes. In this chapter, the history, setup, and focus of the Digital Earth project are described.
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  • 11
    Publication Date: 2022-08-17
    Description: The Digital Earth project aims at a strong interrelation between Data and Earth Science and a step-change in implementing data science methods within Earth science research. During the project, the progress of interdisciplinary collaboration and adoption of data science methods has been measured and assessed with the goal to trace the success of the project. This chapter provides the set-up of this evaluation and the results from two online questionnaires that were held after the start and before the end of the project.
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  • 12
    Publication Date: 2022-08-17
    Description: Diversity within marine microbiomes spans the three domains of life: microbial eukaryotes (i.e., protists), bacteria, and archaea. Although protists were the first microbes observed by microscopy, it took the advent of molecular techniques to begin to resolve their complex and reticulate evolutionary history. Symbioses between microbial entities have been key in this journey, and such interactions continue to shape the ecology of marine microbiomes. Nowadays, photosynthetic marine protists are appreciated for their activities as primary producers, rivalling land plant contributions in the global carbon cycle. Predatory protists are known for consuming prokaryotes and other protists, with some combining metabolisms into a mixotrophic lifestyle. Still, much must be learned about specific interactions and lifestyles, especially for uncultured groups recognized just by environmental sequences. With respect to the fate of protists in food webs, there are many paths to consider. Despite being in early stages of identifying interactions, whether mutualistic or death-inducing infections by parasites and viruses, knowledge is advancing rapidly via methods for interrogation in nature without culturing. Here, we review marine protists, their evolutionary histories, diversity, ecological roles, and lifestyles in all layers of the ocean, with reference to how views have shifted over time through extensive investigation.
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  • 13
    Publication Date: 2022-11-01
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  • 14
    Publication Date: 2022-12-09
    Description: Data-driven science has turned into a fourth fundamental paradigm of performing research. Earth System Science, following a holistic approach in unraveling the complex network of processes and interactions shaping system Earth, particularly profits from embracing data-driven approaches next to observation and modeling. At the end, increasing digitalization of Earth sciences will lead to cultural transformation towards a Digital Earth Culture.
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  • 15
    Publication Date: 2022-12-19
    Description: New sedimentological data of facies and diagenesis as well as chronological data including strontium (87Sr/86Sr)-isotope ratios and uranium (U)-series dating, radiocarbon (14C) accelerator mass spectrometry (AMS) dating and biostratigraphy from elevated reef terraces (makatea) in the southern Cook Islands of Mangaia, Rarotonga and Aitutaki contribute to controversial discussions regarding age and sea-level relationships of these occurrences during the Neogene and Quaternary. The oldest limestones of the uplifted makatea island of Mangaia include reef-related facies which are mid-Miocene in age, based on new Sr-isotope and biostratigraphical data. In between these older deposits and the lowest coastal reef terrace of marine isotope stage (MIS) 5e, various older Pleistocene reef-related facies were identified. Based on Sr-isotope ratios, these were deposited during earlier Pleistocene highstands (as old as 2.28 Ma). Rare reef terraces on Rarotonga belong to the Plio-Pleistocene and the late Miocene, according to 87Sr/86Sr ratios. The late Miocene age is enigmatic as it exceeds the age of subaerially exposed volcanic rocks of Rarotonga island. The fossil reef could have formed on an older submarine volcanic high that was later displaced by younger volcanism to its present position, or the Sr-age could be too old due to diagenetic resetting. The Plio-Pleistocene Rarotonga reef terraces are overlain irregularly by Holocene reef deposits that are interpreted as storm rubble. Reef terraces on Aitutaki represent evidence of a higher-than-present (up to 1 m) sea-level during the late Holocene, based on 14C AMS age data. They are very similar to elevated late Holocene reefs of adjacent French Polynesia with regard to composition, elevation and age.
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  • 16
    Publication Date: 2022-12-19
    Description: A comprehensive study of the Earth system and its related processes requires a holistic examination and understanding of multidimensional data acquired with a large number of different sensors or produced by various models. To this end, the Digital Earth project developed a set of software solutions to study environmental data sets using visual approaches. In the following chapter, we present three data visualization products developed to deal with the challenges of the analysis and exploration of environmental data.
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  • 17
    Publication Date: 2022-12-19
    Description: Reliable data are the base of all scientific analyses, interpretations and conclusions. Evaluating data in a smart way speeds up the process of interpretation and conclusion and highlights where, when and how additionally acquired data in the field will support knowledge gain. An extended SMART monitoring concept is introduced which includes SMART sensors, DataFlows, MetaData and Sampling approaches and tools. In the course of the Digital Earth project, the meaning of SMART monitoring has significantly evolved. It stands for a combination of hard- and software tools enhancing the traditional monitoring approach where a SMART monitoring DataFlow is processed and analyzed sequentially on the way from the sensor to a repository into an integrated analysis approach. The measured values itself, its metadata, and the status of the sensor, and additional auxiliary data can be made available in real time and analyzed to enhance the sensor output concerning accuracy and precision. Although several parts of the four tools are known, technically feasible and sometimes applied in Earth science studies, there is a large discrepancy between knowledge and our derived ambitions and what is feasible and commonly done in the reality and in the field.
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  • 18
    Publication Date: 2022-01-19
    Description: Global population projections foresee the biggest increase to occur in Africa with most of the available uncultivated land to ensure food security remaining on the continent. Simultaneously, greenhouse gas emissions are expected to rise due to ongoing land use change, industrialisation, and transport amongst other reasons with Africa becoming a major emitter of greenhouse gases globally. However, distinct knowledge on greenhouse gas emissions sources and sinks as well as their variability remains largely unknown caused by its vast size and diversity and an according lack of observations across the continent. Thus, an environmental research infrastructure—as being setup in other regions—is more needed than ever. Here, we present the results of a design study that developed a blueprint for establishing such an environmental research infrastructure in Africa. The blueprint comprises an inventory of already existing observations, the spatial disaggregation of locations that will enable to reduce the uncertainty in climate forcing’s in Africa and globally as well as an overall estimated cost for such an endeavour of about 550 M€ over the next 30 years. We further highlight the importance of the development of an e-infrastructure, the necessity for capacity development and the inclusion of all stakeholders to ensure African ownership.
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  • 19
    Publication Date: 2022-01-07
    Description: The present study aims to valorize the apple peels (AP) and grape seeds (GS) by the fortification of the yogurts using their powder. Firstly, the optimization of the extraction parameters for assessing maximum of total phenolic content (TPC) was achieved. Under the optimized conditions, the experimental maximum yields of TPC were 19.33 ± 2.33 and 240.59 ± 4.77 mg Gallic Acid Equivalents (GAE)/100 g Dry Weight (DW) for AP and GS, respectively, which was in close agreement with predicted values (19.32 ± 0.91 and 242.26 ± 11.08 mg GAE/100 g DW for AP and GS, respectively). The antioxidant capacity of GS extract was better with IC50 of 12.22 ± 0.89 and 225.47 ± 7.10 µg/ml in DPPH and phosphomolybdenum assays, respectively. Besides, powder from these by-products was incorporated into yogurt samples. The classification test revealed that the yogurt prepared with GS powder was the preferred one.
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  • 20
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    Wiley
    In:  In: Bergey's Manual of Systematics of Archaea and Bacteria. Wiley, Chichester, p. 1.
    Publication Date: 2022-01-14
    Description: Pa.ra.rho.do.spi.ril'lum. Gr. pref. para-, beside, alongside of, near, like; N.L. neut. n. Rhodospirillum, a bacterial generic name; N.L. neut. n. Pararhodospirillum, resembling Rhodospirillum. Proteobacteria / Alphaproteobacteria / Rhodospirillales / Rhodospirillaceae / Pararhodospirillum Pararhodospirillum species are spiral-shaped, mesophilic, and phototrophic freshwater bacteria of the Rhodospirillaceae family. Cells are motile by polar flagella, and photosynthetic pigments are located in internal photosynthetic membranes present as lamellar stacks. Photosynthetic pigments are bacteriochlorophyll a and carotenoids of the spirilloxanthin series with spirilloxanthin itself lacking. Ubiquinone-9 and rhodoquinone-9 are the major quinones. All species are sensitive to oxygen and require anoxic or microoxic conditions for growth. They grow photoheterotrophically under anoxic conditions in the light. Photoautotrophic growth, aerobic chemotrophic growth, and fermentative growth have not been demonstrated. Growth factors are required. DNA G + C content (mol%): 60.2–65.8 (Bd and HPLC) and 64.7–67 (GA). Type species: Pararhodospirillum photometricum Lakshmi et al. 2014VP (basonym: Rhodospirillum photometricum Molisch 1907AL).
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  • 21
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    In:  In: Bergey's Manual of Systematics of Archaea and Bacteria. Wiley, Chichester, p. 1.
    Publication Date: 2022-01-14
    Description: Rho.do.ci'sta Gr. neut. n. rhodon, rose; L. fem. n. cista a basket; N.L. fem. n. Rhodocista, red basket. Proteobacteria / Alphaproteobacteria / Rhodospirillales / Azospirillaceae / Rhodocista Rhodocista centenaria is a well-characterized thermotolerant, phototrophic purple bacterium growing optimally at a temperature of 40–45°C and a maximal growth temperature of 48°C. Under low nutrient conditions, Rhodocista forms desiccation-, heat-, and UV-resistant cysts, which enable survival under severe drought and salt stress. Cells are motile by a single polar flagellum in liquid culture but in addition form lateral flagella on agar surfaces and under these conditions may show a characteristic phototactic movement. Rhodocista species grow under photoheterotrophic conditions and also are able to perform a chemotrophic aerobic metabolism. They encode enzymes for autotrophic carbon dioxide fixation and fixation of dinitrogen, although autotrophic growth has so far not been demonstrated. In the type species, bacteriochlorophyll biosynthesis occurs under both aerobic and anaerobic growth conditions. Aerobically grown cells are fully pigmented. In other species, oxygen may inhibit photosynthetic pigment biosynthesis, and aerobically grown cells are colorless. DNA G + C content (mol%): 68.8–69.9 (Tm), 70.5 (WGS). Type species: Rhodocista (Rcs.) centenaria Kawasaki et al. 1992, VL48 (basonym: Rhodospirillum centenum Favinger et al. 1989, VL48).
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  • 22
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    Wiley
    In:  In: Bergey's Manual of Systematics of Archaea and Bacteria. Wiley, Chichester, p. 1.
    Publication Date: 2022-01-14
    Description: Rho.do.pi'la. Gr. neut. n. rhodon the rose; N.L. fem. n. pila a ball or sphere; N.L. fem. n. Rhodopila red sphere. Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Rhodopila Rhodopila globiformis is one of the very few anaerobic phototrophic purple bacteria that can grow below pH 6 with an optimum depending on the organic carbon substrate from 4.8 to 5.6. Growth occurs preferably photoheterotrophically under anoxic conditions in the light. Cells are sensitive to oxygen but grow by respiration under microoxic conditions in the dark. Growth factors are required. They are acidophilic freshwater bacteria that inhabit acidic warm sulfur springs. Cells are spherical to ovoid, motile by means of polar flagella, and divide by binary fission. They stain Gram-negative and have internal photosynthetic membranes of the vesicular type. Rhodopila is classified within the Acetobacteraceae family and Rhodospirillales order of the Alphaproteobacteria. The photosynthetic pigments are bacteriochlorophyll a and carotenoids. The major fatty acids are C18:1 (∼75%) and C16:0. Ubiquinones, menaquinones, and rhodoquinones with 9 and 10 isoprene units are produced. DNA G + C content (mol%): 67.1 (genome analysis). Type species: Rhodopila globiformis Imhoff et al. 1984VP (basonym: Rhodopseudomonas globiformis Pfennig 1974AL).
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  • 23
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    Wiley
    In:  In: Bergey's Manual of Systematics of Archaea and Bacteria. Wiley, Chichester, p. 1.
    Publication Date: 2022-01-14
    Description: Rho.do.pla'nes. Gr. neut. n. rhodon rose; Gr. masc. n. planos a wanderer; N.L. masc. n. Rhodoplanes a red wanderer. Proteobacteria / Alphaproteobacteria / Rhizobiales / Hyphomicrobiaceae / Rhodoplanes The genus Rhodoplanes accommodates species of anoxygenic facultative phototrophic bacteria that grow optimally under anaerobic conditions in the light. They belong to the family Hyphomicrobiaceae of the order Rhizobiales within the class Alphaproteobacteria. Cells are Gram-stain-negative rods and multiply by budding and asymmetric cell division. Motile by means of polar, subpolar, or lateral flagella. Internal photosynthetic membranes are present as lamellar stacks parallel to the cytoplasmic membrane. Photosynthetic pigments are bacteriochlorophyll a and carotenoids of the spirilloxanthin series. Photoorganotrophy with pyruvate and some other organic acids is the best mode of growth. Straight-chain, monounsaturated C18:1 ω7c is the main component of the cellular fatty acids and C16:0 is a second major component. Ubiquinones and rhodoquinones with 10 isoprene units (Q-10 and RQ-10) are present. The main components of polar lipids are phosphatidylethanolamine, phosphatidylcholine, phosphatidylglycerol, and diphosphatidylglycerol. Terrestrial and freshwater bacteria having a preference for mesophilic to moderately thermophilic habitats and neutral pH. DNA G + C content (mol%): 67.2–70.4. Type species: Rhodoplanes roseus Hiraishi and Ueda 1994 (Rhodopseudomonas rosea Janssen and Harfoot 1991).
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  • 24
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    Wiley
    In:  In: Bergey's Manual of Systematics of Archaea and Bacteria. Wiley, Chichester, pp. 1-7.
    Publication Date: 2022-01-17
    Description: Rho.do.pi'la. Gr. neut. n. rhodon the rose; N.L. fem. n. pila a ball or sphere; N.L. fem. n. Rhodopila red sphere. Proteobacteria / Alphaproteobacteria / Rhodospirillales / Acetobacteraceae / Rhodopila Rhodopila globiformis is one of the very few anaerobic phototrophic purple bacteria that can grow below pH 6 with an optimum depending on the organic carbon substrate from 4.8 to 5.6. Growth occurs preferably photoheterotrophically under anoxic conditions in the light. Cells are sensitive to oxygen but grow by respiration under microoxic conditions in the dark. Growth factors are required. They are acidophilic freshwater bacteria that inhabit acidic warm sulfur springs. Cells are spherical to ovoid, motile by means of polar flagella, and divide by binary fission. They stain Gram-negative and have internal photosynthetic membranes of the vesicular type. Rhodopila is classified within the Acetobacteraceae family and Rhodospirillales order of the Alphaproteobacteria. The photosynthetic pigments are bacteriochlorophyll a and carotenoids. The major fatty acids are C18:1 (∼75%) and C16:0. Ubiquinones, menaquinones, and rhodoquinones with 9 and 10 isoprene units are produced. DNA G + C content (mol%): 67.1 (genome analysis). Type species: Rhodopila globiformis Imhoff et al. 1984VP (basonym: Rhodopseudomonas globiformis Pfennig 1974AL).
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  • 25
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    Wiley
    In:  In: Bergey's Manual of Systematics of Archaea and Bacteria. Wiley, Chichester, pp. 1-10.
    Publication Date: 2022-01-17
    Description: Rho.do.spi.ril'lum. Gr. neut. n. rhodon, the rose; N.L. neut. n. Spirillum, a bacterial genus; N.L. neut. n. Rhodospirillum, the rose Spirillum. Proteobacteria / Alphaproteobacteria / Rhodospirillales / Rhodospirillaceae / Rhodospirillum The genus Rhodospirillum has harbored a diverse set of spiral-shaped phototrophic bacteria, most of which have been reclassified as species of other genera, families, and even orders and phyla since the 1980s. The heterogeneity has been long known, but only the faith into sequence-based information gave strong support for taxonomic rearrangements. Currently, the genus Rhodospirillum contains a single species, which is characterized by spiral-shaped cells, motility by bipolar flagella, and internal membranes as vesicles. It performs anaerobic photosynthesis, which is restricted to anoxic light conditions due to the oxygen-sensitive biosynthesis of bacteriochlorophyll and thus the phototrophic apparatus. It can grow photoheterotrophically as well as photoautotrophically. The key enzyme of autotrophic carbon dioxide fixation in Rhodospirillum rubrum, ribulose bisphosphate carboxylase (RubisCO) type-II, is well characterized and forms a homodimer that is also encoded in some related genera of Rhodospirillaceae. Chemotrophic growth may also occur under microoxic to oxic conditions in the dark and anaerobically by fermentation. The genus comprises mesophilic freshwater bacteria. Ubiquinones and rhodoquinones with 10 isoprene units and fatty acids typical of other Alphaproteobacteria with C18:1, C16:0, and C16:1 as major components are present. DNA G + C content (mol%): 64.6–65.7, type 65.4 (genome analysis), 63.8–65.8 (Bd). Type species: Rhodospirillum (Rsp.) rubrum Molisch 1907AL (basonym: Spirillum rubrum Esmarch 1887).
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  • 26
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    In:  In: Bergey's Manual of Systematics of Archaea and Bacteria. Wiley, Chichester, pp. 1-8.
    Publication Date: 2022-01-17
    Description: Rho.do.ci'sta Gr. neut. n. rhodon, rose; L. fem. n. cista a basket; N.L. fem. n. Rhodocista, red basket. Proteobacteria / Alphaproteobacteria / Rhodospirillales / Azospirillaceae / Rhodocista Rhodocista centenaria is a well-characterized thermotolerant, phototrophic purple bacterium growing optimally at a temperature of 40–45°C and a maximal growth temperature of 48°C. Under low nutrient conditions, Rhodocista forms desiccation-, heat-, and UV-resistant cysts, which enable survival under severe drought and salt stress. Cells are motile by a single polar flagellum in liquid culture but in addition form lateral flagella on agar surfaces and under these conditions may show a characteristic phototactic movement. Rhodocista species grow under photoheterotrophic conditions and also are able to perform a chemotrophic aerobic metabolism. They encode enzymes for autotrophic carbon dioxide fixation and fixation of dinitrogen, although autotrophic growth has so far not been demonstrated. In the type species, bacteriochlorophyll biosynthesis occurs under both aerobic and anaerobic growth conditions. Aerobically grown cells are fully pigmented. In other species, oxygen may inhibit photosynthetic pigment biosynthesis, and aerobically grown cells are colorless. DNA G + C content (mol%): 68.8–69.9 (Tm), 70.5 (WGS). Type species: Rhodocista (Rcs.) centenaria Kawasaki et al. 1992, VL48 (basonym: Rhodospirillum centenum Favinger et al. 1989, VL48).
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  • 27
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    In:  In: Bergey's Manual of Systematics of Archaea and Bacteria. Wiley, Chichester, pp. 1-2.
    Publication Date: 2022-01-17
    Description: Rho.do.tha.las.si.a.ce'ae. N.L. neut. n. Rhodothalassium, type genus of the family; suff. -aceae, ending to denote a family; N.L. fem. pl. n. Rhodothalassiaceae, the family of Rhodothalassium. Proteobacteria / Alphaproteobacteria / Rhodothalassiales / Rhodothalassiaceae Cells are vibrioid to spiral shaped, are motile by means of polar flagella, and multiply by binary fission. They belong to the class Alphaproteobacteria and stain Gram-negative. An unusual protein-rich cell wall with only low amounts of peptidoglycan may be present. Internal photosynthetic membranes are present as lamellar stacks lying parallel to the cytoplasmic membrane. The photosynthetic pigments are bacteriochlorophyll a and carotenoids. The major ubiquinone and menaquinone components are Q-10 and MK-10. Growth occurs preferably photoheterotrophically under anoxic conditions in the light but also may be possible under microoxic to oxic conditions in the dark. Obligately halophilic bacteria that require NaCl or sea salt for growth. Habitats are anoxic zones of hypersaline environments such as salterns, salt lakes, and evaporated coastal lagoons that are exposed to light. At present, the family includes a single genus. DNA G + C content of the type species and genus (mol%): 68.5–69.0 (genome analysis), 60.0–62.8 (HPLC analysis). Type genus: Rhodothalassium Imhoff et al. 1998VP.
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  • 28
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    In:  In: Bergey's Manual of Systematics of Archaea and Bacteria. Wiley, Chichester, p. 1.
    Publication Date: 2022-01-17
    Description: Phae.o.spi.ril'lum. Gr. masc. adj. phaeos, brown; N.L. neut. n. Spirillum, a bacterial genus; N.L. neut. n. Phaeospirillum, brown Spirillum. Proteobacteria / Alphaproteobacteria / Rhodospirillales / Rhodospirillaceae / Phaeospirillum Phaeospirillum species are vibrioid to spiral shaped and motile Alphaproteobacteria. They are strictly anaerobic and anoxygenic phototrophic bacteria with a reaction center and light-harvesting complexes located in the internal membrane stacks formed at a sharp angle with the cytoplasmic membrane. The photosynthetic pigments are bacteriochlorophyll a esterified with phytol and carotenoids of the spirilloxanthin series, with spirilloxanthin itself lacking. They have a photoheterotrophic metabolism and depend on anoxic conditions for biosynthesis of bacteriochlorophyll and photosynthesis. The preferred carbon substrates are fatty acids including longer chains up to pelargonate. The longer chain fatty acids provide a selective advantage for several of the species. Chemotrophic growth may be possible at controlled and very low oxygen tensions (〈1.5 kPa) in the dark. Ammonia and dinitrogen serve as nitrogen sources. Assimilatory sulfate reduction is present. Growth factors may be required. Phaeospirillum species are mesophilic freshwater bacteria with a preference for neutral pH that live in stagnant and anoxic freshwater habitats. DNA G + C content (mol%): 60.5–65.3 (Bd), 62.1–62.8 (Tm), 61.5–64.7 (WGS). Type species: Phaeospirillum (Phs.) fulvum Imhoff et al. 1998VP (basonym: Rhodospirillum fulvum van Niel 1944AL).
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  • 29
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    In:  In: Bergey's Manual of Systematics of Archaea and Bacteria. Wiley, Chichester, p. 1.
    Publication Date: 2022-01-17
    Description: Rho.do.tha.las.si.a'les. N.L. neut. n. Rhodothalassium, type genus of the order; suff. -ales, ending denoting an order; N.L. fem. pl. n. Rhodothalassiales, the Rhodothalassium order. Proteobacteria / Alphaproteobacteria / Rhodothalassiales The order currently comprises a single family and genus, which is characterized by halophilic anoxygenic phototrophic bacteria having spiral-shaped cells and containing lamellar photosynthetic membranes. The properties of the order are determined by the characteristics of the Rhodothalassiaceae family.
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  • 30
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    In:  In: Bergey's Manual of Systematics of Archaea and Bacteria. Wiley, Chichester, p. 1.
    Publication Date: 2022-01-17
    Description: Rho.do.tha.las'si.um. Gr. neut. n. rhodon, the rose; Gr. masc. adj. thalassios, belonging to the sea; N.L. neut. n. Rhodothalassium, the rose belonging to the sea. Proteobacteria / Alphaproteobacteria / Rhodothalassiales / Rhodothalassiaceae / Rhodothalassium The genus Rhodothalassium is represented by a single species and is the only genus of the Rhodothalassiaceae family and Rhodothalassiales order. It is characterized by vibrioid- to spiral-shaped cells which multiply by binary fission and are motile by means of flagella. Internal photosynthetic membranes are present as lamellar stacks lying parallel to the cytoplasmic membrane. Photosynthetic pigments are bacteriochlorophyll a and carotenoids of the spirilloxanthin series. Ubiquinones and menaquinones with 10 isoprene units (Q-10 and MK-10) are present. Growth occurs preferably photoheterotrophically under anoxic conditions in the light. Most strains also grow chemoorganotrophically under oxic conditions in the dark. Rhodothalassium species are obligately halophilic, require NaCl or sea salt for growth, and live in anoxic zones of hypersaline environments such as salterns, salt lakes, and evaporated coastal lagoons that are exposed to the light. DNA G + C content (mol%): 68.5–69.0 (WGS), 60.0–62.8 (HPLC). Type species: Rhodothalassium salexigens Imhoff et al. 1998VP (basonym: Rhodospirillum salexigens Drews 1981, VL9).
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  • 31
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    In:  In: Bergey's Manual of Systematics of Archaea and Bacteria. Wiley, Chichester, pp. 1-12.
    Publication Date: 2022-01-17
    Description: Rho.do.pla'nes. Gr. neut. n. rhodon rose; Gr. masc. n. planos a wanderer; N.L. masc. n. Rhodoplanes a red wanderer. Proteobacteria / Alphaproteobacteria / Rhizobiales / Hyphomicrobiaceae / Rhodoplanes The genus Rhodoplanes accommodates species of anoxygenic facultative phototrophic bacteria that grow optimally under anaerobic conditions in the light. They belong to the family Hyphomicrobiaceae of the order Rhizobiales within the class Alphaproteobacteria. Cells are Gram-stain-negative rods and multiply by budding and asymmetric cell division. Motile by means of polar, subpolar, or lateral flagella. Internal photosynthetic membranes are present as lamellar stacks parallel to the cytoplasmic membrane. Photosynthetic pigments are bacteriochlorophyll a and carotenoids of the spirilloxanthin series. Photoorganotrophy with pyruvate and some other organic acids is the best mode of growth. Straight-chain, monounsaturated C18:1 ω7c is the main component of the cellular fatty acids and C16:0 is a second major component. Ubiquinones and rhodoquinones with 10 isoprene units (Q-10 and RQ-10) are present. The main components of polar lipids are phosphatidylethanolamine, phosphatidylcholine, phosphatidylglycerol, and diphosphatidylglycerol. Terrestrial and freshwater bacteria having a preference for mesophilic to moderately thermophilic habitats and neutral pH. DNA G + C content (mol%): 67.2–70.4. Type species: Rhodoplanes roseus Hiraishi and Ueda 1994 (Rhodopseudomonas rosea Janssen and Harfoot 1991).
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  • 32
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    In:  In: Bergey's Manual of Systematics of Archaea and Bacteria. Wiley, Chichester, pp. 1-7.
    Publication Date: 2022-01-17
    Description: Pa.ra.rho.do.spi.ril'lum. Gr. pref. para-, beside, alongside of, near, like; N.L. neut. n. Rhodospirillum, a bacterial generic name; N.L. neut. n. Pararhodospirillum, resembling Rhodospirillum. Proteobacteria / Alphaproteobacteria / Rhodospirillales / Rhodospirillaceae / Pararhodospirillum Pararhodospirillum species are spiral-shaped, mesophilic, and phototrophic freshwater bacteria of the Rhodospirillaceae family. Cells are motile by polar flagella, and photosynthetic pigments are located in internal photosynthetic membranes present as lamellar stacks. Photosynthetic pigments are bacteriochlorophyll a and carotenoids of the spirilloxanthin series with spirilloxanthin itself lacking. Ubiquinone-9 and rhodoquinone-9 are the major quinones. All species are sensitive to oxygen and require anoxic or microoxic conditions for growth. They grow photoheterotrophically under anoxic conditions in the light. Photoautotrophic growth, aerobic chemotrophic growth, and fermentative growth have not been demonstrated. Growth factors are required. DNA G + C content (mol%): 60.2–65.8 (Bd and HPLC) and 64.7–67 (GA). Type species: Pararhodospirillum photometricum Lakshmi et al. 2014VP (basonym: Rhodospirillum photometricum Molisch 1907AL).
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  • 33
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    In:  In: Bergey's Manual of Systematics of Archaea and Bacteria. Wiley, Chichester, p. 1.
    Publication Date: 2022-01-17
    Description: Ro.se.o.spi'ra. L. masc. adj. roseus, rosy; Gr. fem. n. spira, the spiral; N.L. fem. n. Roseospira the rosy spiral. Proteobacteria / Alphaproteobacteria / Rhodospirillales / Rhodospirillaceae / Roseospira Roseospira species are vibrioid to spiral shaped, anoxygenic, and phototrophic bacteria of the Rhodospirillaceae family that live in various types of marine and slightly saline habitats all over the world. The photosynthetic pigments are bacteriochlorophyll a and carotenoids of the spirilloxanthin series, and internal photosynthetic membranes are present as vesicles. They perform a phototrophic way of life using organic substrates (photoheterotrophic growth) or inorganic reduced sulfur compounds (photoautotrophic growth) as electron donors for photosynthesis. Bacteriochlorophyll biosynthesis depends on anoxic to microoxic conditions, and chemotrophic growth is possible under microoxic to oxic conditions in the light. Nitrogenase and ribulose bisphosphate carboxylase may be present. Vitamins or yeast extracts are required as growth factors. The G + C content of the DNA is 67.8–71.2 (GA), and the genome size ranges from 4.19 to 4.61 Mb. DNA G + C content (mol%): 67.8–71.2 (GA) (type species 66.6 Tm). Type species: Roseospira mediosalina Imhoff et al. 1998VP (synonym: “Rhodospirillum mediosalinum” Kompantseva and Gorlenko 1984).
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  • 34
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    Springer
    In:  Human-Environment Interactions
    Publication Date: 2022-03-21
    Type: info:eu-repo/semantics/book
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  • 35
    Publication Date: 2022-09-26
    Type: Article , NonPeerReviewed
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  • 36
    Publication Date: 2022-01-07
    Description: It is a good method to utilize the grain size distribution curves and cumulative frequency curves of marine or river sediments to estimate the hydrodynamic conditions, transportation processes and sedimentary environment. However, researchers can only rely on Excel or Grapher to plot the curves one by one at the present day. The manual plotting procedures are complicated, and calculating the truncation points is time-consuming. To solve the aforementioned problems, we have developed a software tool to plot cumulative frequency curves and calculate the values of truncation points automatically. The software has the ability to plot curves of hundreds of samples accurately and rapidly, promoting researchers to analyze transport mechanisms and hydrodynamic environments. And it is convenient to apply the software to compare the processes of transportation and deposition between different samples.
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  • 37
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    In:  In: Bergey's Manual of Systematics of Archaea and Bacteria. Wiley, Chichester, p. 1.
    Publication Date: 2022-01-14
    Description: Rho.do.mi.cro' bi.um. Gr. neut. n. rhodon the rose; Gr. masc. adj. micros small; Gr. masc. n. bios life; N.L. neut. n. Rhodomicrobium red microbe. Proteobacteria / Alphaproteobacteria / Rhizobiales / Hyphomicrobiaceae / Rhodomicrobium Most characteristic for Rhodomicrobium species is the polar cell growth and the characteristic vegetative growth cycle which includes the formation of peritrichously flagellated swarmer cells and nonmotile “mother cells,” which form prosthecae from one to several times the length of the mother cell. Daughter cells originate as spherical buds at the end of the prosthecae and may undergo differentiation in various ways. They are Gram-negative ovoid to elongate-ovoid bacteria belonging to the Alphaproteobacteria. Internal photosynthetic membranes are of the lamellar type. Photosynthetic pigments are bacteriochlorophyll a and carotenoids of the spirilloxanthin series. The predominant cellular fatty acid is C18:1, which comprises more than 80% of the membrane-bound fatty acids. Ubiquinone and rhodoquinone with 10 isoprene units are present, and the lipopolysaccharides are characterized by a glucosamine-containing, phosphate-free lipid A with amide-bound C16:0 3 OH. DNA G + C content (mol%): 61.8–63.8. Type species: Rhodomicrobium vannielii Duchow and Douglas 1949.
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  • 38
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    In:  In: Bergey's Manual of Systematics of Archaea and Bacteria. Wiley, Chichester, p. 1.
    Publication Date: 2022-01-17
    Description: Proteobacteria Alphaproteobacteria Rhizobiales Hyphomicrobiaceae Blas.to.chlo'ris. Gr. masc. n. blastos bud shoot; Gr. masc. adj. chloros green; N.L. fem. n. Blastochloris green bud shoot. Proteobacteria / Alphaproteobacteria / Rhizobiales / Hyphomicrobiaceae / Blastochloris Blastochloris species are anoxygenic phototrophic Alphaproteobacteria that have bacteriochlorophyll b in their photosynthetic reaction centers. Crystals of the photosynthetic reaction centers of Blastochloris viridis were the first that have been studied in high-resolution structure analysis at 3 Å resolution. Internal photosynthetic membranes are present as lamellae underlying and parallel to the cytoplasmic membrane. Cells are rod shaped to ovoid and exhibit polar growth, budding, and asymmetric cell division and form rosette-like cell aggregates. They are motile by means of subpolar flagella and stain Gram-negative. Straight-chain monounsaturated C18:1 is the predominant component of cellular fatty acids. Ubiquinones and menaquinones are present, and the lipopolysaccharides are characterized by a 2,3-diamino-2,3-deoxy-d-glucose (DAG)-containing, phosphate-free lipid A with amide-bound C14:0 3OH. DNA G + C content (mol%): 63.8–68.3. Type species: Blastochloris viridis (Drews and Giesbrecht 1966) Hiraishi 1997 (Rhodopseudomonas viridis Drews and Giesbrecht 1966).
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  • 39
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    In:  In: Bergey's Manual of Systematics of Archaea and Bacteria (BMSAB). , ed. by Brenner, D. J., Krieg, N. R. and Staley, J. T. Wiley, New York, USA, pp. 506-507. ISBN 978-1-118-96060-8
    Publication Date: 2022-01-17
    Description: Rho.do.mi.cro' bi.um. Gr. neut. n. rhodon the rose; Gr. masc. adj. micros small; Gr. masc. n. bios life; N.L. neut. n. Rhodomicrobium red microbe. Proteobacteria / Alphaproteobacteria / Rhizobiales / Hyphomicrobiaceae / Rhodomicrobium Most characteristic for Rhodomicrobium species is the polar cell growth and the characteristic vegetative growth cycle which includes the formation of peritrichously flagellated swarmer cells and nonmotile “mother cells,” which form prosthecae from one to several times the length of the mother cell. Daughter cells originate as spherical buds at the end of the prosthecae and may undergo differentiation in various ways. They are Gram‐negative ovoid to elongate‐ovoid bacteria belonging to the Alphaproteobacteria. Internal photosynthetic membranes are of the lamellar type. Photosynthetic pigments are bacteriochlorophyll a and carotenoids of the spirilloxanthin series. The predominant cellular fatty acid is C18:1, which comprises more than 80% of the membrane‐bound fatty acids. Ubiquinone and rhodoquinone with 10 isoprene units are present, and the lipopolysaccharides are characterized by a glucosamine‐containing, phosphate‐free lipid A with amide‐bound C16:0 3 OH. DNA G + C content (mol%): 61.8–63.8. Type species: Rhodomicrobium vannielii Duchow and Douglas 1949.
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  • 40
    Publication Date: 2022-04-07
    Description: In times of accelerating climate change, species are challenged to respond to rapidly shifting environmental settings. Yet, faunal distribution and composition are still scarcely known for remote and little explored seas, where observations are limited in number and mostly refer to local scales. Here, we present the first comprehensive study on Eurasian-Arctic macrobenthos that aims to unravel the relative influence of distinct spatial scales and environmental factors in determining their large-scale distribution and composition patterns. To consider the spatial structure of benthic distribution patterns in response to environmental forcing, we applied Moran’s eigenvector mapping (MEM) on a large dataset of 341 samples from the Barents, Kara and Laptev Seas taken between 1991 and 2014, with a total of 403 macrobenthic taxa (species or genera) that were present in ≥ 10 samples. MEM analysis revealed three spatial scales describing patterns within or beyond single seas (broad: ≥ 400 km, meso: 100–400 km, and small: ≤ 100 km). Each scale is associated with a characteristic benthic fauna and environmental drivers (broad: apparent oxygen utilization and phosphate, meso: distance-to-shoreline and temperature, small: organic carbon flux and distance-to-shoreline). Our results suggest that different environmental factors determine the variation of Eurasian-Arctic benthic community composition within the spatial scales considered and highlight the importance of considering the diverse spatial structure of species communities in marine ecosystems. This multiple-scale approach facilitates an enhanced understanding of the impact of climate-driven environmental changes that is necessary for developing appropriate management strategies for the conservation and sustainable utilization of Arctic marine systems.
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  • 41
    Publication Date: 2022-07-24
    Description: The availability of dissolved iron (dFe) exerts an important control on primary production. Recent ocean observation programs have provided information on dFe in many parts of the ocean, but knowledge is still limited concerning the rates of processes that control the concentrations and cycling of dFe in the ocean and hence the role of dFe as a determinant of global primary production. We constructed a three-dimensional gridded dataset of oceanic dFe concentrations by using both observations and a simple model of the iron cycle, and estimated the difference of processes among the ocean basins in controlling the dFe distributions. A Green's function approach was used to integrate the observations and the model. The reproduced three-dimensional dFe distribution indicated that iron influx from aeolian dust and from shelf sediment were 7.6 Gmol yr and 4.4 Gmol yr in the Atlantic Ocean and 0.4 Gmol yr and 4.1 Gmol yr in the Pacific Ocean. The residence times were estimated to be 12.2 years in the Atlantic and 80.4 years in the Pacific. These estimates imply large differences in the cycling of dFe between the two ocean basins that would need to be taken into consideration when projecting future iron biogeochemical cycling under different climate change scenarios. Although there is some uncertainty in our estimates, global estimates of iron cycle characteristics based on this approach can be expected to enhance our understanding of the material cycle and hence of the current and future rates of marine primary production.
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  • 42
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    Springer
    In:  Berlin, Springer, vol. 6, no. 22, pp. 71-80, (ISBN 0-87590-422-X)
    Publication Date: 2004
    Keywords: Textbook of mathematics ; Statistical investigations ; software
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  • 43
    Publication Date: 2017-11-24
    Description: Ulva ohnoi Hiraoka et Shimada sp. nov. (Ulvales, Ulvophyceae) is described from southern and western Japan and is characterized by the following combination of features: (i) the large, fragile, easily torn thalli, which are 30–55 μm thick in the upper and middle regions and often have microscopic marginal teeth; (ii) the production of zoids in the upper marginal region; (iii) a regular alternation of dioecious gametophytes and a sporophyte; (iv) the production of free-floating thalli from torn-off attached thalli, which reproduce vegetatively by fragmentation and form green tides in summer to autumn; (v) disorderly arranged cells that are polygonal or quadrangular in the upper and middle regions; and (vi) the chloroplast covering the outer face of cell, with 1–3 pyrenoids. Ulva ohnoi differs from U. armohcana Dion et al., U. fasciata Delile, U. reticulata Forsskal, U. scandinavica Eliding and U. spiulosaOkamura et Segawa, which all possess microscopic marginal serrations, in thallus shape, cell shape or life history pattern. It is also distinguished from morphologically similar species by sequences of the nuclear encoded internal transcribed spacers and the 5.8S ribosomal RNA gene and the plastid encoded large subunit of ribulose-l,5-bisphosphate carboxylase/oxgenase gene. Furthermore, crossing tests demonstrate that there is a reproductive boundary between U. ohnoi and the most closely related species, U. fasciata and U. reticulata.
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  • 44
    Publication Date: 2018-07-20
    Description: Measurements of the gas vesicle space in steady‐state light or phosphate‐limited cultures of Aphanizomenon flos‐aquae Ralfs, strain 7905 showed that gas vesicle content decreased as energy‐limited growth rate increased hut was the same at several phosphate‐limited growth rates. Upon a decrease in growth irradiance, gas vesicle content did increase in phosphate‐limited cultures, hut the cultures remained nonbuoyant as long as P was limiting. Buoyant, energy‐limited cultures lost their buoyancy in less than 2 h when exposed to higher irradiances. The primary mechanism for buoyancy loss was the accumulation of polysaccharide as ballast. Collapse of gas vesicles by turgor pressure played a minor role in the loss of buoyancy. When cultures were exposed to higher irradiances, cells continued to synthesize gas vesicles at the same rate as before the shift for at least 1 generation time. The amount of ballast required to make individual filaments in the population sink varied 4‐fold. This variation appears to be due to differences in gas vesicle content among individual filaments.
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  • 45
    Publication Date: 2017-06-28
    Description: The dissection of Heterorotula sponges collected in an area of geothermal activity at 126–145 m depth on the floor of Lake Taupo (de Rondeet al., 2002) revealed a dense population of associated Enchytraeidae. They represent three species of Marionina, two of which known but exotic (the Palaearctic M. ripariaBretscher, 1899 and the Chinese M. seminudaXie and Rota, 2001), and one new to science, M. spongicola sp. n. This is the first report of an ecological association between enchytraeids and poriferans in the lake profundal zone. The possible nature of such relationship (casual contact for feeding or dwelling for food and shelter) is discussed.
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  • 46
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    Springer
    In:  International Journal of Earth Sciences, 93 . pp. 596-611.
    Publication Date: 2019-09-23
    Description: Carbonate precipitates on mounds and along tectonic scarps off the Costa Rica margin are manifestations of subduction-induced dewatering. The long-term dewatering history is recorded in mineralogical, petrological and isotope signals of carbonates recovered from these sites. The carbonates are strongly depleted in δ13C (−11 to −53‰ PDB) and enriched in δ18O (+4 to +8‰ PDB). Thermogenic methane and biogenic methane were identified as sources of the carbon. Chemoherm carbonates and seepage-associated carbonates formed in a focused flow regime have lighter δ13C values, while others formed in a more diffusive flow regime have slightly enriched C isotope values. Three fluid components were inferred based on the calculation of equilibrium δ18O: clay dehydration water, gas hydrate water and seawater. Calculated equilibrium δ18O values of carbonates from different down-core depths as well as from different precipitation stages show that the δ18O of the precipitating fluid is progressively depleted with time. Dolostones showing a methane-C source and a well constrained O-isotope signature are thought to have formed at depth in the sediment and subsequently became exhumed. Glauconitic sandstones cemented by methane-derived carbonate provide evidence that fluid and solid material have been expelled by the mud volcano.
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  • 47
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    AGU (American Geophysical Union)
    In:  Journal of Geophysical Research: Solid Earth, 109 . B06102.
    Publication Date: 2018-04-25
    Description: We report measurements made with an ocean bottom array which was operated for 10 days on the Mid-Atlantic Ridge just south of the 5°S transform fault/fracture zone. A total of 148 locatable earthquakes with magnitudes ∼0.5–2.8 were recorded; seismic activity appears to be concentrated within the western half of the median valley. The median valley seismic zone is bounded in along-axis direction by the transform fault to the north and the tip of the axial volcanic ridge to the south. A few scattered events occurred within the inside corner high, on the transform fault, and in the western sidewall close to the segment center. Earthquakes reach a maximum depth of 8 km below the median valley floor and appear to be predominantly in the mantle, although a few crustal earthquakes also occurred. The presence of earthquakes in the mantle indicates that it is not strongly serpentinized. We infer the median valley seismic activity to primarily arise from normal faulting.
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  • 48
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    AGU (American Geophysical Union)
    In:  Geochemistry, Geophysics, Geosystems, 5 (1). Q06004.
    Publication Date: 2019-09-23
    Description: [1] A new model is developed and applied to simulate the Phanerozoic evolution of seawater composition (dissolved Ca, Sr, dissolved inorganic carbon, alkalinity, pH, δ18O), marine carbonates (Sr/Ca, 87Sr/86Sr, δ13C, δ18O), atmospheric CO2 and surface temperature. The marine carbonate records (Sr/Ca, 87Sr/86Sr, δ13C) are used to reconstruct changes in volcanic/tectonic activity and organic carbon burial over the Phanerozoic. Seawater pH is calculated assuming saturation with respect to calcite and considering the changing concentration of dissolved Ca documented by brine inclusion data. The depth of calcite saturation is allowed to vary through time and the effects of changing temperature and pressure on the stability constants of the carbonate system are considered. Surface temperatures are calculated using the GEOCARB III approach considering also the changing flux of galactic cosmic radiation (GCR). It is assumed that GCR cools the surface of the Earth via enhanced cloud formation at low altitudes. The δ18O of marine carbonates is calculated considering the changing isotopic composition of seawater, the prevailing surface temperatures and seawater pH. Repeated model runs showed that the trends observed in the marine δ18O record can only be reproduced by the model if GCR is allowed to have a strong effect on surface temperature. The climate evolution predicted by the model is consistent with the geological record. Warm periods (Cambrian, Devonian, Triassic, Cretaceous) are characterized by low GCR levels. Cold periods during the late Carboniferous to early Permian and the late Cenozoic are marked by high GCR fluxes and low pCO2 values. The major glaciations occurring during these periods are the result of carbon cycling processes causing a draw-down of atmospheric CO2 and a coevally prevailing dense cloud cover at low-altitudes induced by strong GCR fluxes. The two moderately cool periods during the Ordovician - Silurian and Jurassic - early Cretaceous are characterized by both high pCO2 and GCR levels so that greenhouse warming compensated for the cooling effect of low-altitude clouds. The very high Jurassic δ18O values observed in the geological record are caused by low pH values in surface waters rather than cold surface conditions.
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  • 49
    Publication Date: 2016-04-15
    Description: High-resolution sediment cores from the Vøring Plateau, the North Iceland shelf, and the East Greenland shelf have been studied to investigate the stability of major surface currents in the Nordic Seas during the Holocene. Results from diatom assemblages and reconstructed sea-surface temperatures (SSTs) indicate a division of the Holocene into three periods: the Holocene Climate Optimum (9500–6500 calendar (cal) years BP), the Holocene Transition Period (6500–3000 cal years BP) and the Cool Late Holocene Period (3000–0 cal years BP). The overall climate development is in step with the decreasing insolation on the Northern Hemisphere, but regional differences occur regarding both timing and magnitude of SST changes. Sites under the direct influence of the Norwegian Atlantic Current and the Irminger Current indicate SST cooling of 4–5°C from early Holocene to present, compared to 2°C recorded under the East Greenland Current. Superimposed on the general Holocene cooling trend, there is a high-frequency SST variability, which is in the order of 1–1.5°C for the Vøring Plateau and the East Greenland shelf and 2.5–3°C on the North Iceland shelf.
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  • 50
    Publication Date: 2020-03-19
    Description: In our analysis [Rahmstorf et al., 2004], we arrived at two main conclusions: the data of Shaviv and Veizer [2003] do not show a significant correlation of cosmic ray flux (CRF) and climate, and the authors' estimate of climate sensitivity to CO2 based on a simple regression analysis is questionable. After careful consideration of Shaviv and Veizer's comment, we want to uphold and reaffirm these conclusions. Concerning the question of correlation, we pointed out that a correlation arose only after several adjustments to the data, including shifting one of the four CRF peaks and stretching the time scale. To calculate statistical significance, we first need to compute the number of independent data points in the CRF and temperature curves being correlated, accounting for their autocorrelation. A standard estimate [Quenouille, 1952] of the number of effective data points is urn:x-wiley:00963941:media:eost14930:eost14930-math-0001 where N is the total number of data points and r1, r2 are the autocorrelations of the two series. For the curves of Shaviv and Veizer [2003], the result is NEFF = 4.8. This is consistent with the fact that these are smooth curves with four humps, and with the fact that for CRF the position of the four peaks is determined by four spiral arm crossings or four meteorite clusters, respectively; that is, by four independent data points. The number of points that enter the calculation of statistical significance of a linear correlation is (NEFF− 2), since any curves based on only two points show perfect correlation; at least three independent points are needed for a meaningful result.
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  • 51
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    AGU (American Geophysical Union)
    In:  Eos, Transactions American Geophysical Union, 85 (4). pp. 38-41.
    Publication Date: 2017-02-10
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  • 52
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    AGU (American Geophysical Union)
    In:  Global Biogeochemical Cycles, 18 (2). GB2012.
    Publication Date: 2018-03-16
    Description: The physical, chemical/biological processes that control the methane dynamics in the Weddell Sea are revealed by the distributions of methane (CH4), its stable carbon isotope ratio, δ13C-CH4, and the conservative transient tracer, chlorofluorocarbon-11 (CFC-11, CCl3F). In general, a nearly linear correlation between CH4 and CFC-11 concentrations was observed. Air-sea exchange is the major source of methane to this region, and the distribution of methane is controlled mainly by mixing between surface water and methane-poor Warm Deep Water. A significant influence of methane oxidation over the predominant two end-member mixing was only found in the Weddell Sea Bottom Water (WSBW) of the deep central Weddell Basin, where the turnover time of methane appears to be about 20 years. Mixing also controls most of the δ13C-CH4 distribution, but lighter than expected carbon isotopic ratios occur in the deep WSBW of the basin. From box model simulations, it appears that this “anomaly” is due to methane oxidation with a low kinetic isotope fractionation of about 1.004. The surface waters in the Weddell Sea and the Antarctic Circumpolar Current showed a general methane undersaturation of 6 to 25% with respect to the atmospheric mixing ratio. From this undersaturation and model-derived air-sea exchange rates, we estimate a net uptake of CH4 of roughly −0.5 μmol m−2 d−1 during austral autumn.
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  • 53
    Publication Date: 2018-04-03
    Description: We examined the thermoregulatory behaviour (TRB) of roosting Humboldt penguins (Spheniscus humboldti) in north central Chile during summer and winter, when ambient temperatures (Ta) are most extreme. Each body posture was considered to represent a particular TRB, which was ranked in a sequence that reflected different degrees of thermal load and was assigned an arbitrary thermoregulatory score. During summer, birds exhibited eight different TRBs, mainly oriented to heat dissipation, and experienced a wide range of Ta (from 14 to 31°C), occasionally above their thermoneutral zone (TNZ, from 2 to 30°C), this being evident by observations of extreme thermoregulatory responses such as panting. In winter, birds exhibited only three TRBs, mainly oriented to heat retention, and experienced a smaller range of Ta (from 11 to 18°C), always within the TNZ, even at night. The components of behavioural responses increased directly with the heat load which explains the broader behavioural repertoire observed in summer. Since penguins are primarily adapted in morphology and physiology to cope with low water temperatures, our results suggest that behavioural thermoregulation may be important in the maintenance of the thermal balance in Humboldt penguins while on land.
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  • 54
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    Springer
    In:  Marine Biology, 145 . pp. 1097-1106.
    Publication Date: 2018-06-07
    Description: We quantified the nitrogen and enzyme hydrolyzable amino acid (EHAA) concentrations of sediments prior to and after corals sloughed, ingested, and egested sediments layered onto their surfaces, for the three coral species Siderastrea siderea, Agaricia agaricites, and Porites astreoides in Jamaica. The percent nitrogen of the sediments egested by all three species was lower than in the sediments available to the corals. Additionally, the sediments sloughed (not ingested) by A. agaricites and P. astreoides were lower in percent nitrogen, while the sediments sloughed by S. siderea had the same percent nitrogen as that of the available sediments. The percent nitrogen of the sediments sloughed and egested by P. astreoides showed significant negative and positive relationships, respectively, to increasing sediment loads, while the percent nitrogen of the sediments sloughed and egested by both S. siderea and A. agaricites showed no relationship to sediment load. EHAA concentrations were not significantly different between the sloughed and available sediments but were significantly lower in the sediments egested by S. siderea and A. agaricites (EHAA concentrations were not measured for P. astreodies sediment fractions). Comparisons of the nitrogen and EHAA concentrations in the sloughed and egested sediments to what was available prior to coral processing show that maximum ingestion was between 0.1 and 0.2 µg N µg−1 coral N cm−2 and between 0.5 and 0.6 µg EHAA·cm−2. Maximum assimilation efficiencies were estimated to be 30–60% of the available nitrogen. The data show that corals ingest and alter the nitrogen concentration of particles that land on their surfaces. The corals’ abilities to process these sediments, and the sediments’ possible contributions to coral nutrition, are discussed based on these results.
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  • 55
    Publication Date: 2017-01-26
    Description: The application of radiogenic isotopes to the study of Cenozoic circulation patterns in the South Pacific Ocean has been hampered by the fact that records from only equatorial Pacific deep water have been available. We present new Pb and Nd isotope time series for two ferromanganese crusts that grew from equatorial Pacific bottom water (D137-01, “Nova,” 7219 m water depth) and southwest Pacific deep water (63KD, “Tasman,” 1700 m water depth). The crusts were dated using 10Be/9Be ratios combined with constant Co-flux dating and yield time series for the past 38 and 23 Myr, respectively. The surface Nd and Pb isotope distributions are consistent with the present-day circulation pattern, and therefore the new records are considered suitable to reconstruct Eocene through Miocene paleoceanography for the South Pacific. The isotope time series of crusts Nova and Tasman suggest that equatorial Pacific deep water and waters from the Southern Ocean supplied the dissolved trace metals to both sites over the past 38 Myr. Changes in the isotopic composition of crust Nova are interpreted to reflect development of the Antarctic Circumpolar Current and changes in Pacific deep water circulation caused by the build up of the East Antarctic Ice Sheet. The Nd isotopic composition of the shallower water site in the southwest Pacific appears to have been more sensitive to circulation changes resulting from closure of the Indonesian seaway.
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  • 56
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    AGU (American Geophysical Union)
    In:  Geophysical Research Letters, 31 (23). L23S05.
    Publication Date: 2018-02-27
    Description: Oceanic bromoform (CHBr3) is the major source of organic Br to the atmosphere and may be significant for ozone depletion through the contribution of reactive bromine to the upper troposphere and lower stratosphere of the midlatitudes and tropics. We report the first analyses of boundary layer air, surface and deep ocean waters from the tropical Atlantic. The data provide evidence of a source of CHBr3 throughout the tropical open ocean associated with the deep chlorophyll maximum within the tropical thermocline. Equatorial upwelling carries the CHBr3 to the surface, adding to increased concentrations in the equatorial mixed layer and driving oceanic emissions that support locally elevated atmospheric concentrations. In air masses that had crossed the coastal upwelling region off NW Africa even higher atmospheric mixing ratios were measured. The observations suggest a link between climate, wind-driven upwelling, and the supply of Br to the upper atmosphere of the tropics.
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  • 57
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    AGU (American Geophysical Union)
    In:  Geophysical Research Letters, 31 . L15308.
    Publication Date: 2018-03-21
    Description: The Galápagos Islands provide a topographic barrier for the Southern Equatorial Current (SEC) and the Equatorial Undercurrent (EUC). An island wake effect can be diagnosed from the difference of an ocean general circulation model simulation which includes the Galápagos Islands and one which ignores their presence. Cold thermocline water upwells on the western side of the islands, and only during boreal winter season these cold waters can linger around the Islands at a depth of about 80 m and affect the far eastern equatorial Pacific surface waters. This effect is partly offset by the westward transport of cold surface waters by the SEC which creates a wake on the western side of the Islands. It is furthermore shown that changes in horizontal current shear, induced by the presence of the Galápagos Islands modify the generation of tropical instability waves and lead to a basin scale SST anomaly pattern.
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  • 58
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    Springer
    In:  In: Oceanic hotspots: intraplate submarine magmatism and tectonism / R. , ed. by Hekinian, R., Stoffers, P. and Cheminee, J. L. Springer, ---, pp. 375-405.
    Publication Date: 2019-09-23
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  • 59
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    Wiley
    In:  Ecology Letters, 7 . pp. 192-201.
    Publication Date: 2017-02-22
    Description: While consumer species diversity is known to influence the capture of limited resources, little is known about how prey diversity impacts the transfer of energy and matter among trophic levels. Here, we perform a meta-analysis of experiments that have examined the impact of grazers on the biomass of periphytic algae to test the hypothesis that the magnitude of consumer (grazer) effects on prey (algae) depends on the species diversity of the prey assemblage. The analysis reveals that consumer effects tend to decrease as the diversity of a prey assemblage increases. This trend is robust for several different, yet complementary indices of grazer effect size and algal diversity. The trend also remains significant after statistically controlling for a variety of factors that can covary with prey diversity among studies. We discuss several possible mechanisms for the documented pattern, such as diversity enhancing the probability of inedibility and of positive interactions.
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  • 60
    Publication Date: 2018-04-03
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  • 61
    Publication Date: 2018-03-16
    Description: The contribution of the marine biota to air-sea fluxes of CO2 and O2 is often described in terms of biological production concepts, such as new production, export production, and net community production. We evaluate these three quantities using a basin-scale ecosystem-circulation model of the North Atlantic Ocean based on Redfield stoichiometry into which we introduce an artificial tracer which records the biotic contribution to air-sea exchange of gases like O2 and CO2. It is found that on average the biological production rates overestimate the biotically effected air-sea flux by some 20% and, in some regions, even predict the wrong direction. With primary production restricted to the euphotic zone, but respiration extending to farther below, the discrepancy can largely be attributed to the different integration depths used in the different concepts (euphotic zone, surface mixed layer), and on annual and longer timescales, all rates converge when using the base of the winter mixed layer rather than that of the euphotic zone as the reference depth. For the surface carbon budget, which ultimately controls air-sea exchange of CO2, it is irrelevant whether carbon atoms cross this boundary in organic or inorganic speciation. Hence the transports of biotically generated surpluses or deficits of dissolved inorganic matter must also be accounted for. While their contribution amounts to only a few percent on the basin scale, the subduction of newly remineralized inorganic matter can locally account for about half of the biotically effected air-sea flux, for example, in regions of mode-water formation.
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  • 62
    Publication Date: 2018-04-25
    Description: New seismic and geodetic data from Costa Rica provide insight into seismogenic zone processes in Central America, where the Cocos and Caribbean plates converge. Seismic data are from combined land and ocean bottom deployments in the Nicoya peninsula in northern Costa Rica and near the Osa peninsula in southern Costa Rica. In Nicoya, inversion of GPS data suggests two locked patches centered at 14 ± 2 and 39 ± 6 km depth. Interplate microseismicity is concentrated in the more freely slipping intermediate zone, suggesting that small interseismic earthquakes may not accurately outline the updip limit of the seismogenic zone, the rupture zone for future large earthquakes, at least over the short (∼1 year) observation period. We also estimate northwest motion of a coastal “sliver block” at 8 ± 3 mm/yr, probably related to oblique convergence. In the Osa region to the south, convergence is orthogonal to the trench. Cocos-Caribbean relative motion is partitioned here, with ∼8 cm/yr on the Cocos-Panama block boundary (including a component of permanent shortening across the Fila Costeña fold and thrust belt) and ∼1 cm/yr on the Panama block–Caribbean boundary. The GPS data suggest that the Cocos plate–Panama block boundary is completely locked from ∼10–50 km depth. This large locked zone, as well as associated forearc and back-arc deformation, may be related to subduction of the shallow Cocos Ridge and/or younger lithosphere compared to Nicoya, with consequent higher coupling and compressive stress in the direction of plate convergence.
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  • 63
    Publication Date: 2017-02-06
    Description: A numerical model of the Atlantic Ocean was used to study the low-frequency variability of meridional transports in the North Atlantic. The model shows a behaviour similar to those used in previous studies, and the temporal variability of certain variables compares favourably to observed time series. By changing the depth and width of the sills between the subpolar North Atlantic and the Nordic Seas, the mean horizontal and overturning circulation as well as some water mass properties are modified significantly. The reaction of meridional oceanic transports to atmospheric forcing fluctuations remains, however, unchanged. The critical role of the surface heat flux retroaction term for the meridional heat transport in stand-alone ocean models is discussed. The experiments underline the role of atmospheric variability for fluctuations of the large-scale ocean circulation on time scales from years to decades, and they support the hypothesis that the mean overturning strength is controlled by the model representation of the density of the overflow water masses.
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  • 64
    Publication Date: 2017-05-24
    Description: Seismic reflection data document for the first time the existence of a BSR in a limited area west of the Dnieper Canyon in the northwestern Black Sea. Seismic wide-angle data suggest that gas hydrates occupy in average 15±2% of the pore space in a zone of 100 m in thickness. A conservative quantification of the amount of methane associated with this gas hydrate occurrence is about 12±3×1011 m3 (0.6±0.2 Gt of methane carbon). Conductive heat flow deduced from the BSR depth is in the range of 21±6 to 55±15 mW m−2.
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  • 65
    Publication Date: 2017-05-10
    Description: An 8 million year record of subtropical and midlatitude shelf-sea temperatures, derived from oxygen isotopes of well-preserved brachiopods from a variety of European sections, demonstrates a long-term Cenomanian temperature rise (16–20°C, midlatitudes) that reached its maximum early in the late Turonian (23°C, midlatitudes). Superimposed on the long-term trend, shelf-sea temperatures vary at shorter timescales in relation to global carbon cycle perturbations. In the mid-Cenomanian and the late Turonian, two minor shelf-sea cooling events (2–3°C) coincide with carbon cycle perturbations and times of high-amplitude sea level falls. Although this evidence supports the hypothesis of potential glacioeustatic effects on Cretaceous sea level, the occurrence of minimum shelf-sea temperatures within transgressive beds argues for regional changes in shelf-sea circulation as the most plausible mechanism. The major carbon cycle event in the latest Cenomanian (oceanic anoxic event 2) is accompanied by a substantial increase in shelf-sea temperatures (4–5°C) that occurred ∼150 kyr after the commencement of the δ13C excursion and is related to the spread of oceanic conditions in western European shelf-sea basins. Our oxygen isotope record and published δ18O data of pristinely preserved foraminifera allow the consideration of North Atlantic surface water properties in the Cenomanian along a transect from the tropics to the midlatitudes. On the basis of fossil-derived δ18O, estimated δw ranges, and modeled salinities, temperature-salinity-density ranges were estimated for tropical, subtropical, and midlatitude surface waters. Accordingly, the Cenomanian temperate shelf-seas waters have potentially the highest surface water density and could have contributed to North Atlantic intermediate to deep waters in the preopening stage of the equatorial Atlantic gateway.
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  • 66
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    AGU (American Geophysical Union)
    In:  Geophysical Research Letters, 31 (21). L21502.
    Publication Date: 2015-01-26
    Description: The consistency of long-term yearly precipitation and runoff trends over the largest Arctic watersheds (Ob, Yenisei and Lena Rivers) is examined. Three gridded precipitation datasets (Climatic Research Unit, University of Delaware, NCEP) are used for comparative analyses with runoff data collected at basin outlets. The results generally demonstrate inconsistency in long-term changes of basin precipitation and runoff. The Yenisei River runoff increases significantly, while precipitation data show mostly negative trends. The Ob River does not show any significant trend either in precipitation or runoff. Positive trend in the Lena River runoff is accompanied by a weak precipitation increase; however, the precipitation increase is not strong enough to support the observed runoff change. The inconsistency identified in basin precipitation and runoff trends suggests uncertainty in both the quality of basin precipitation and runoff datasets, as well as the perceived hydrologic factors impacting runoff change.
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  • 67
    Publication Date: 2015-08-26
    Description: Sponges (phylum Porifera) are sessile marine filter feeders that have developed efficient defense mechanisms against foreign attackers such as viruses, bacteria, or eukaryotic organisms. Protected by a highly complex immune system, as well as by the capacity to produce efficient antiviral compounds (e.g., nucleoside analogues), antimicrobial compounds (e.g., polyketides), and cytostatic compounds (e.g., avarol), they have not become extinct during the last 600 million years. It can be assumed that during this long period of time, bacteria and microorganisms coevolved with sponges, and thus acquired a complex common metabolism. It is suggested that (at least) some of the bioactive secondary metabolites isolated from sponges are produced by functional enzyme clusters, which originated from the sponges and their associated microorganisms. As a consequence, both the host cells and the microorganisms lost the ability to grow independently from each other. Therefore, it was—until recently—impossible to culture sponge cells in vitro. Also the predominant number of “symbiotic bacteria” proved to be nonculturable. In order to exploit the bioactive potential of both the sponge and the “symbionts,” a 3D-aggregate primmorph culture system was established; also it was proved that one bioactive compound, avarol/avarone, is produced by the sponge Dysidea avara. Another promising way to utilize the bioactive potential of the microorganisms is the cloning and heterologous expression of enzymes involved in secondary metabolism, such as the polyketide synthases.
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  • 68
    Publication Date: 2015-01-28
    Description: Polyclonal antibodies that recognize the two subunits AmoA and AmoB of the ammonia monooxygenase (AMO) were applied to identify ammonia-oxidizing bacteria by immunofluorescence (IF) labeling in pure, mixed, and enriched cultures. The antibodies against the AmoA were produced using a synthetic peptide of the AmoA of Nitrosomonas eutropha, whereas the antibodies against the AmoB had been developed previously is against the whole B-subunit of the AMO [Pinck et al. (2001) Appl Environ Microbiol 67:118–124]. Using IF labeling, the AmoA antibodies were specific for the detection of all species of the genus Nitrosomonas. In contrast, the antiserum against AmoB labeled all genera of ammonia oxidizers of the β-subclass of Proteobacteria (Nitrosomonas, Nitrosospira, Nitrosolobus, and Nitrosovibrio). The fluorescence signals of the AmoA antibodies were spread all over the cells, whereas the signals of the AmoB antibodies were associated with the cytoplasmic membranes. The specificity of the reactions of the antisera with ammonia oxidizers were proven in pure and mixed cultures, and the characteristic IF labeling and the morphology of the cells enabled their identification at the genus level. The genus-specific IF labeling could be used to identify ammonia oxidizers enriched from various habitats. In enrichment cultures of natural sandstone, cells of the genera Nitrosomonas, Nitrosovibrio, and Nitrosospira were detected. Members of the genus Nitrosovibrio and Nitrosolobus were most prominent in enriched garden soil samples, whereas members of the genus Nitrosomonas dominated in enriched activated sludge. The antibodies caused only slight background fluorescence on sandstone and soil particles compared to oligonucleotide probes, which could not be used to detect ammonia oxidizers on these materials because of strong nonspecific fluorescence.
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  • 69
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    Springer
    In:  In: The Organic Carbon Cycle in the Arctic: Present and Past. , ed. by Stein, R. and Macdonald, R. W. Springer, Berlin (u.a.), pp. 41-45. ISBN 3-540-01153-6
    Publication Date: 2015-02-19
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  • 70
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    Springer
    In:  International Journal of Earth Sciences, 93 (4). pp. 645-651.
    Publication Date: 2015-03-23
    Description: Durch Vermittlung von Jörn Thiede gelangte das Geologenarchiv in den Besitz eines Videobands von einem Fernsehinterview mit Rosenqvist (auch gelegentlich Rosenquist), das Elen Roaldset (E.R.) im Geologischen Institut der Universität Oslo am 8.September 1988 führen konnte. Es umfasst den gesamten Lebenslauf und die wichtigsten wissenschaflichen Leistungen dieses aussergewöhnlichen Geologen und Mineralogen. Er wurde in Wien am 17. Mai 1916 geboren, kam aber mit seinen Eltern schon 1917 nach Oslo, wo er am 8. Oktober 1994 starb (K. Bjørlykke 1995). Im Folgenden sollen aus dem Interview nur seine wegweisenden Untersuchungen der Quicktone, seine fachliche Vielseitigkeit, sein gesellschaftliches Engagement und seine schwierigen Erfahrungen mit Deutschland herausgegriffen werden. Das in der Landessprache geführte Gespräch wurde von Geir Ebelfoff und Lars Erik Kastilan ins Deutsche transkribiert.
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  • 71
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    Springer
    In:  In: Electronic Noses & Sensors for the Detection of Explosives. NATO Science Series, 159 . Springer, Berlin, Germany, pp. 279-288. ISBN 978-1-4020-2318-7
    Publication Date: 2015-10-20
    Description: Portable and automated field screening equipment would be very effective in assessing contamination due to explosives at many defense sites. A droplet based microfluidic lab-on-a-chip utilizing electrowetting has been presented for fully automated detection of TNT. Microliter droplets of TNT in DMSO and KOH in water are reacted on a chip in a programmed way. The same platform has integrated colorimetric detection. The detection of TNT is linear in the range of 12.5–50 µg/mL.
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  • 72
    Publication Date: 2016-01-06
    Description: Log and core data document gas saturations as high as 90% in a coarse-grained turbidite sequence beneath the gas hydrate stability zone (GHSZ) at south Hydrate Ridge, in the Cascadia accretionary complex. The geometry of this gas-saturated bed is defined by a strong, negative-polarity reflection in 3D seismic data. Because of the gas buoyancy, gas pressure equals or exceeds the overburden stress immediately beneath the GHSZ at the summit. We conclude that gas is focused into the coarse-grained sequence from a large volume of the accretionary complex and is trapped until high gas pressure forces the gas to migrate through the GHSZ to seafloor vents. This focused flow provides methane to the GHSZ in excess of its proportion in gas hydrate, thus providing a mechanism to explain the observed coexistence of massive gas hydrate, saline pore water and free gas near the summit.
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  • 73
    Publication Date: 2015-02-13
    Description: The effect of microrelief and vegetation on methane (CH4) emission was investigated in a wet polygonal tundra of the Lena Delta, Northern Siberia (72.37N, 126.47E). Total and plant-mediated CH4 fluxes were measured by closed-chamber techniques at two typical sites within a low-centred polygon. During the study period, total CH4 flux averaged 28.0 ± 5.4 mg m−2 d−1 in the depressed polygon centre and only 4.3 ± 0.8 mg m−2 d−1 at the elevated polygon rim. This substantial small-scale spatial variability of CH4 emission was caused by strong differences of hydrologic conditions within the microrelief of the polygon, which affected aeration status and organic matter content of the soils as well as the vegetation cover. Beside water table position, the vegetation cover was a major factor controlling CH4 emission from polygonal tundra. It was shown that the dominant vascular plant of the study area, Carex aquatilis, possesses large aerenchyma, which serve as pathways for substantial plant-mediated CH4 transport. The importance of plant-mediated CH4 flux was strongly influenced by the position of the water table relative to the main root horizon. Plant-mediated CH4 transport accounted for about two-thirds of the total flux in the wet polygon centre and for less than one-third of the total flux at the moist polygon rim. A clipping experiment and microscopic-anatomical studies suggested that plant-mediated CH4 transport via C. aquatilis plants is driven only by diffusion and is limited by the high diffusion resistance of the dense root exodermes.
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  • 74
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    Springer
    In:  In: The Organic Carbon Cycle in the Arctic: Present and Past. , ed. by Stein, R. and Macdonald, R. W. Springer, Berlin (u.a.), pp. 33-41. ISBN 3-540-01153-6
    Publication Date: 2015-03-03
    Type: Book chapter , NonPeerReviewed
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  • 75
    Publication Date: 2015-08-26
    Description: From cell cultures of Suberites domuncula was isolated a bacterial strain, SDC-1, which was identified by 16S ribosomal RNA sequence analysis as an α-Proteobacterium of the genus Ruegeria. The occurrence of the strain in sponge cell culture could be explained by its resistance to the antibiotics used in the isolation of sponge cell cultures or by the preservation of SDC-1 by host sponge cells. The fatty acid composition of SDC-1 is characterized by branched C-12 methyl fatty acids. Two new and 8 known cyclic dipeptides were isolated and characterized from the fermentation broth of SDC-1. Cyclodipeptides are one of the families of cell-cell signaling compounds and may have some role to play in sponge-bacteria interactions.
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  • 76
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    Springer
    In:  Applied Biochemistry and Biotechnology, 119 (3). pp. 241-277.
    Publication Date: 2020-06-11
    Description: Culture pelleting and morphology has a strong influence on process productivity and success for fungal and filamentous bacterial cultures. This impact is particularly evident with early phase secondary metabolite processes with limited process definition. A compilation of factors affecting filamentous or pelleting morphology described in the literature indicates potential leads for developing process-specific control methodologies. An evaluation of the factors mediating citric acid production is one example of an industrially important application of these techniques. For five model fungal and filamentous bacterial processes in an industrial fermentation pilot plant, process development strategies were developed and effectively implemented with the goal of achieving reasonable fermentation titers early in the process development cycle. Examples of approaches included the use of additives to minimize pelleting in inoculum shake flasks, the use of large-volume frozen bagged inoculum obtained from agitated seed fermentors, and variations in production medium composition and fermentor operating conditions. Results were evaluated with respect to productivity of desired secondary metabolites as well as process scalability. On-line measurements were utilized to indirectly evaluate the cultivation impact of changes in medium and process development. Key laboratory to pilot plant scale-up issues also were identified and often addressed in subsequent cultivations.
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  • 77
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    Springer
    In:  Geo-Marine Letters, 24 (2). pp. 75-85.
    Publication Date: 2017-05-24
    Description: Hydroacoustic methods are particularly suitable for investigations of the occurrence, cyclicity and amount of bubbles released at cold seeps without disturbing them. Experiments with a horizontally looking single beam transducer (40 and 300 kHz) directed towards artificially produced bubbles show that the backscattering strength of the bubbles increases with the gas flux rate independently of the bubble radii distribution. It is demonstrated that an acoustic system can be calibrated in such a way that gas flux rates of bubble-size spectra, as observed at natural seeps, can be directly related to the echo level of a known, acoustically insonified volume. No system-specific parameters have to be known except the beam width.
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  • 78
    Publication Date: 2016-05-18
    Description: The distribution of platinum group elements (PGE) in Cu- and Zn-rich samples from the Roman Ruins and Satanic Mills vent sites in the PACMANUS hydrothermal field (Papua New Guinea) was studied and compared to that from selected ancient volcanogenic massive sulfide (VMS) deposits. Samples from the Satanic Mills site are enriched in Pd and Rh when compared to samples from Roman Ruins and reach highest values in active and inactive Cu-rich black smoker chimneys and chalcopyrite-cemented dacite breccias (up to 356 ppb Pd and up to 145 ppb Rh). A significant positive correlation was established between Cu and Pd and Rh in samples from both vent sites. Comparisons of chondrite normalized patterns and values of Pd/Pt and Pd/Ir ratios in Cu-rich sulfides and probable source rocks (felsic volcanic rocks/MORB) along with the evidence for a magmatic component in the PACMANUS hydrothermal system indicate that leaching of back-arc volcanic rocks together with addition of magmatic volatiles to the convecting hydrothermal system was the most important factor for PGE enrichment at PACMANUS and likely at some PGE-enriched ancient VMS deposits.
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  • 79
    Publication Date: 2017-07-24
    Description: The Alhambra (14th century AD) in Granada (southeast Spain) is built at the summit of a Pliocene to Lower Pleistocene conglomeratic formation. Tens of small-scale normal faults crop out along the northern hillslope of the Alhambra, which have a N130–N150°E strike, dipping 65–75° mostly to the southwest. These are closely spaced faults (approximately 5–30 m) with centimetre to several metre displacements. Several topographic steps in this area coincide with hectometre- to kilometre-scale faults with the same kinematics as the small-scale ones. Some of these faults appear to be active and related to the present seismicity detected in this region, and associated with the cracks and other damage observed in the Alhambra. Several focal mechanisms calculated in this study are in accordance with the dominant NW–SE orientated normal faults. We interpret that the topographic steps of these faults are a consequence of repeated earthquakes during the past 800 ka. The last large earthquake of approximately 5.1 magnitude in this area occurred in 1431, destroying the Alixares Palace, the Arabian fence and part of the Alhambra wall. We consider the seismic risk associated with these faults to be moderate, as the displacement is partitioned into several hectometre- to kilometre-scale faults.
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  • 80
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    AGU (American Geophysical Union)
    In:  Journal of Geophysical Research: Solid Earth, 109 . B02101.
    Publication Date: 2018-04-25
    Description: The 1.5-km-high, obliquely subducting Nazca Ridge and its collision zone with the Peruvian margin have been imaged by wide-angle and reflection seismic profiles, swath bathymetry, and gravity surveying. These data reveal that the crust of the ridge at its northeastern tip is 17 km thick and exhibits seismic velocities and densities similar to layers 2 and 3 of typical oceanic crust. The lowermost layer contributes 10–12 km to the total crustal thickness of the ridge. The sedimentary cover is 300–400 m thick on most parts of the ridge but less than 100 m thick on seamounts and small volcanic ridges. At the collision zone of ridge and margin, the following observations indicate intense tectonic erosion related to the passage of the ridge. The thin sediment layer on the ridge is completely subducted. The lower continental slope is steep, dipping at ∼9°, and the continental wedge has a high taper of 18°. Tentative correlation of model layers with stratigraphy derived from Ocean Drilling Program Leg 112 cores suggests the presence of Eocene shelf deposits near the trench. Continental basement is located 〈15 km landward of the trench. Normal faults on the upper slope and shelf indicate extension. A comparison with the Peruvian and northern Chilean forearc systems, currently not affected by ridge subduction, suggests that the passage of the Nazca Ridge along the continental margin induces a temporarily limited phase of enhanced tectonic erosion superposed on a long-term erosive regime.
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  • 81
    Publication Date: 2018-01-19
    Description: The Greens Creek polymetallic massive sulphide deposit is hosted in a typical polyphase deformed lower greenschist facies orogenic setting. The structure of the host rocks is well constrained, exhibiting a series of three superimposed ductile deformations followed by two brittle episodes. The ore is found both in fold hinges where early-formed depositional features are preserved and in fold limbs where primary features are typically strongly modified or obliterated. Samples from both settings have been investigated using electron backscatter diffraction (EBSD) coupled with forescatter orientation contrast (OC) imaging in order to observe the effects of deformation and lower greenschist facies metamorphism on pyrite. Results suggest that colloform pyrite may preserve information relevant to palaeoenvironment, that apparently simple textures are generally more complex, and that pyrite can deform plastically by dislocation glide and creep processes at lower temperatures and/or strain rates than generally accepted. This analysis indicates that EBSD and OC imaging provide powerful tools for observing textural relationships in pyrite that are not shown by more traditional methods. They should become routine tools for pyrite texture analysis.
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  • 82
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    AGU (American Geophysical Union)
    In:  Paleoceanography, 19 (PA1003).
    Publication Date: 2017-05-10
    Description: A marine sediment core from the leeward margin of Great Bahama Bank (GBB) was subjected to a multiproxy study. The aragonite dominated core MD992201 comprises the past 7230 years in a decadal time resolution and shows sedimentation rates of up to 13.8 m/kyr. Aragonite mass accumulation rates, age differences between planktonic foraminifera and aragonite sediments, and temperature distribution are used to deduce changes in aragonite production rates and paleocurrent strengths. Aragonite precipitation rates on GBB are controlled by exchange of carbonate ions and CO2 loss due to temperature-salinity conditions and biological activity, and these are dependent on the current strength. Paleocurrent strengths on GBB show high current velocities during the periods 6000–5100 years BP, 3500–2700 years BP, and 1600–700 years BP; lower current speeds existed during the time intervals 5100–3500 years BP, 2700–1600 years BP, and 700–100 years BP. Bahamian surface currents are directly linked to the North Atlantic atmospheric circulation, and thus periods with high (low) current speeds are proposed to be phases of strong (weak) atmospheric circulation.
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  • 83
    Publication Date: 2018-01-31
    Description: [1] Volcanic glasses contained in distal fallout tephras from the Izu arc volcanic front (Izu VF) provide unique perspectives on general problems of arc volcanism. Unlike cogenetic lavas, these glasses are liquid compositions where element concentrations as well as ratios have significance. Isotopic evidence and previous work show that there is no sediment melt contribution to the sources of the Izu VF tephras, and hence their trace element characteristics permit determination of the trace element contents of slab fluids. The slab fluid is a composite of metasediment (∼5% of total fluid) and metabasalt (∼95%) component fluids, and carries large ion lithophile elements (LILE) with high LILE/Th and LILE/U, and low Th and U relative to source. Except for Sr and K, the metabasalt fluid is much less enriched than the metasediment fluid, but its large relative proportions make it an important carrier of many trace elements. The metabasalt fluid has the characteristics of the arc trace element signature, obviating the need for ubiquitous involvement of sediment in arc magma genesis. The fluid component in the tephras is remarkably constant in composition over fifteen million years, and hence appears to be a robust composition that may be applicable to other convergent margins. Assuming that the metabasalt fluid is a common component, and that distribution coefficients between sediment and fluid are similar from one arc to another, composite fluid compositions can be estimated for other arcs. Differences from this composition then would likely result from a sediment melt component. Comparison to arcs with sediment melt components in their source (Marianas, eastern Aleutians) shows that partial sediment melts may be so enriched, that they can completely mask the signature of the comingling slab fluids. Hence sediment melts can easily dominate the trace element and isotopic signature of many convergent margins. Since sediment melts inherit the LILE/LILE ratios of the trench sediment, Earth's surface processes must eventually influence the compositional diversity of arcs.
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  • 84
    Publication Date: 2018-09-03
    Description: Pelado, Guespalapa, and Chichinautzin monogenetic scoria cones located within the Sierra del Chichinautzin Volcanic Field (SCVF) at the southern margin of Mexico City were dated by the radiocarbon method at 10,000, 2,800–4,700, and 1,835 years b.p., respectively. Most previous research in this area was concentrated on Xitle scoria cone, whose lavas destroyed and buried the pre-Hispanic town of Cuicuilco around 1,665±35 years b.p. The new dates indicate that the recurrence interval for monogenetic eruptions in the central part of the SCVF and close to the vicinity of Mexico City is 〈2,500 years. If the entire SCVF is considered, the recurrence interval is 〈1,700 years. Based on fieldwork and Landsat imagery interpretation a geologic map was produced, morphometric parameters characterizing the cones and lava flows determined, and the areal extent and volumes of erupted products estimated. The longest lava flow was produced by Guespalapa and reached 24 km from its source; total areas covered by lava flows from each eruption range between 54 (Chichinautzin) and 80 km2 (Pelado); and total erupted volumes range between 1 and 2 km3/cone. An average eruption rate for the entire SCVF was estimated at 0.6 km3/1,000 years. These findings are of importance for archaeological as well as volcanic hazards studies in this heavily populated region.
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  • 85
    Publication Date: 2018-05-28
    Description: Several epibiotic species reduce starfish (Asterias rubens) preference for the blue mussel Mytilus edulis in the Baltic. The aim of this study was to reveal whether this associational resistance was caused by structural or chemical aspects of the different epibionts. To assess structural epibiont effects, an in situ experiment was conducted with unfouled mussels and mussels equipped with artificial epibionts ('dummies') exposed to natural predation by A. rubens. The chemically inert dummies closely matched the structural properties of the locally common epibionts Balanus improvisus (barnacle), Ceramium strictum (red alga), Halichondria panicea (sponge), and Laomedea flexuosa (hydrozoan). Starfish fed indiscriminately in all treatments. Chemical effects of epibionts on the attractiveness of mussels for A. rubens were investigated by incorporating freeze-dried epibionts or mussel tissue into Phytagel pellets at natural concentrations. Starfish were allowed to choose among these structurally similar but chemically different prey items in an in vitro experiment. The predators exhibited significant preferences among the food pellets, which closely matched their preferences for corresponding natural mussel-epibiont associations. Thus, chemical aspects of epibionts appear to play a larger role in this associational resistance than do structural aspects. Implications of these indirect interactions for benthic communities are discussed.
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  • 86
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    International Association of Geoanalysts | Wiley
    In:  Geostandards and Geoanalytical Research, 28 (1). pp. 173-178.
    Publication Date: 2019-08-08
    Description: Notations for Cd stable isotope compositions and the use of reference materials are discussed. It is proposed that Cd stable isotope data should be reported as variations of the 114Cd/110Cd ratio/ using either the δ114/110Cd or ε114/110Cd notations. Future publications should report results for BAM-1012 Cd, the only currently available international Cd isotope reference material. It is also recommended that “Münster Cd” and a range of specified geological reference materials are used as additional reference materials. The final choice of a primary “zero-delta” reference standard remains the most important outstanding question.
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  • 87
    Publication Date: 2020-07-20
    Description: The region of north Iceland is highly sensitive climatically owing to its location with respect to atmospheric and oceanographic fronts. In this study we present total carbonate and δ18O records of benthic and planktic Foraminifera from nine sediment cores from the North Iceland Shelf. The results of this work indicate that the deglaciation of the Vestfirdir Peninsula was completed by 10 200 cal. yr BP. The 8200 cal. yr BP cold event is present only as a minor isotopic event, and seems not to have had much of a cooling effect on the bottom waters of the northwest Iceland shelf. The Holocene maximum warmth, attributed to a stronger North Icelandic Irminger Current, occurred between ca. 7800 and 6200 cal. yr BP. Over the past 4500 cal. yr BP a general cooling trend has occurred on the North Iceland Shelf, and superimposed on this overall cooling trend are a number of oscillations between periods when relatively warmer and cooler waters occupied the shelf. Relatively cooler waters were present at 4200–4000 cal. yr BP, 3200–2900 cal. yr BP, 2500–2350 cal. yr BP and 600–200 cal. yr BP, whereas relatively warmer waters were present on the shelf at 3750–3450 cal. yr BP, 2800–2600 cal. yr BP and 1700–1000 cal. yr BP.
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  • 88
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    AGU (American Geophysical Union)
    In:  In: The cenozoic southern ocean: tectonics, sedimentation and climate change between Australia and Antarctica. , ed. by Exon, N., Kennett, J. and Malone, M. Geophysical Monograph Series, 151 . AGU (American Geophysical Union), Washington, DC, pp. 291-318. ISBN 0-87590-416-5
    Publication Date: 2016-04-05
    Type: Book chapter , PeerReviewed
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  • 89
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    Wiley
    In:  Freshwater Biology, 49 . pp. 1495-1504.
    Publication Date: 2019-09-23
    Description: 1. Density gradients of cladocerans and copepods were generated in an enclosure experiment to compare the impact on the plankton of a filter feeder (Daphnia hyalina × galeata) with that of more selective feeders (calanoid and cyclopoid copepods). The experiment was conducted in situ over 25 days during spring in a mesotrophic lake, Schöhsee, Germany. 2. The plankton community was monitored regularly. Daphniids were able to graze on the phytoplankton present, which mainly consisted of small (〈1000 μm3) species, whereas copepods did not show any impact on algae. 3. At the end of the experiment, Daphnia and remaining cyclopoid copepods were harvested and sorted manually, prior to analyses for stable isotopes of carbon and nitrogen. Daphniids from mesocosms stocked purely with differing densities of Daphnia showed little variability in stable isotope values, whereas those that thrived in enclosure bags together with copepods exhibited lower δ13C values. 4. The change in Daphniaδ13C indicates a change of food sources, modified by the presence of the copepods: the higher the mean abundance of copepods in the enclosures, the more 13C-depleted the daphniids. Increasing abundance of high nucleic acid (HNA) bacteria in the copepod bags may account for the trend in Daphniaδ13C via increased grazing on the bacteria themselves, or via grazing on phytoplankton utilising isotopically light CO2 from respiratory release. 5. Cyclopoid copepod stable isotope signatures were related to Daphnia and copepod abundances in copepod bags, suggesting that cyclopoids preyed on the available zooplankton.
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  • 90
    Publication Date: 2017-05-12
    Description: The O'Higgins Seamount Group is a cluster of volcanic domes located 120 km west of the central Chilean Trench on the crest of the Juan Fernández Ridge. This aseismic hot spot track is subducting under South America triggering a belt of intraslab earthquake hypocenters extending about 700 km inland. The Juan Fernández Ridge marks the southern boundary of a shallow subduction segment. Subduction of oceanic basement relief has been suggested as a cause for the “flat” slab segments characterizing the Andean trench system. The Juan Fernández Ridge, however, shows only moderate crustal thickening, inadequate to cause significant buoyancy. In 2001, wide-angle seismic data were collected along two perpendicular profiles crossing the O'Higgins Group. We present tomographic images of the volcanic edifices and adjacent outer rise-trench environment, which indicate a magmatic origin of the seamounts dominated by extrusive processes. High-resolution bathymetric data yield a detailed image of a network of syngenetic structures reactivated in the outer rise setting. A pervasive fault pattern restricted to the hot spot modified lithosphere coincides with anomalous low upper mantle velocities gained from a tomographic inversion of seismic mantle phases. Reduced uppermost mantle velocities are solely found underneath the Juan Fernández Ridge and may indicate mineral alterations. Enhanced buoyancy due to crustal and upper mantle hydration may contribute an additional mechanism for shallow subduction, which prevails to the north after the southward migration of the Juan Fernández Ridge.
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  • 91
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    AGU (American Geophysical Union)
    In:  Paleoceanography, 19 (PA4011).
    Publication Date: 2017-05-10
    Description: On the basis of two sedimentary records from the central Sea of Okhotsk, we reconstruct the closely coupled glacial/interglacial changes in terrigenous flux, marine productivity, and sea ice coverage over the past 1.1 Myr. The correspondance of our sedimentary records to the China loess grain size record (China loess particle timescale, CHILOPARTS) suggests that environmental changes in both the Sea of Okhotsk area and in SE Asia were closely related via the Siberian atmospheric high-pressure cell. During full glacial times our records point to a strong Siberian High causing northerly wind directions, the extension of the sea ice cover, and a reduced Amur River discharge. Deglacial maxima of terrigenous flux were succeeded by or synchronous to high-productivity events. Marine productivity was strengthened during glacial terminations because of an effective nutrient utilization at times of enhanced water column stratification and high nutrient supply from fluvial runoff and sea ice thawing. During interglacials, SE monsoonal winds prevailed, analogous to today's summer situation of a pronounced Mongolian Heat Low and a strong Hawaiian High. Strong freshwater discharge induced by high precipitation rates in the Amur drainage area and a seasonally reduced and mobile sea ice cover favored marine productivity (although being considerably lower than during the terminations) and a lowered flux of ice-rafted detritus.
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  • 92
    Publication Date: 2018-07-17
    Description: Over the last two decades numerous studies have investigated the structure of the west Iberia continental margin, a non-volcanic margin characterized by a broad continent–ocean transition (COT). However, the nature and structure of the crust of the segment of the margin off SW Iberia is still poorly understood, because of sparse geophysical and geological data coverage. Here we present a 275-km-long multichannel seismic reflection (MCS) profile, line AR01, acquired in E–W direction across the Horseshoe Abyssal Plain, to partially fill the gap of information along the SW Iberia margin. Line AR01 runs across the inferred plate boundary between the Iberian and the African plates during the opening of the Central Atlantic ocean. The boundary separates crust formed during or soon after continental rifting of the SW Iberian margin from normal seafloor spreading oceanic crust of the Central Atlantic ocean. Line AR01 has been processed and pre-stack depth migrated to show the tectonic structure of the crust across the palaeo plate boundary. This boundary is characterized by a 30–40-km-wide zone of large basements highs related to landward-dipping reflections, which penetrate to depths of 13–15 km, and it marks a change in the character of the basement structure and relief from east to west. In this study, we have used pre-stack depth migrated images, the velocity model of line AR01 and magnetic data available in the area to show that the change in basement structure occurs across the fossil plate boundary, separating African oceanic crust of the M series (M21–M16) to the west from the transitional crust of the Iberian margin to the east.
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  • 93
    Publication Date: 2018-05-30
    Description: Late Holocene volcanic activity at Ruapehu has been characterizedby the generation of small (〈105 m3) to very large (〉107 m3) lahars and repeated,small to medium (VEI 1-3) tephra-producing eruptions. The Onetapu Formation groupsall lahar deposits that accumulated during the last 2,000 years on the southeastern Ruapehu ring plain. The andesitic tephras are grouped within the Tufa Trig Formation and are intercalated within the laharic sequence. By correlating these two formations with new radiocarbon ages obtained on interbedded paleosols, we reconstruct a detailed volcanic history of Ruapehu for this period. Clast assemblages identified in the laharic sequences record thelithologies of synchronous tephras and rocks within the source region. These assemblages suggest a strong genetic link between the development of Crater Lake, the variation in eruptivestyles, and the production of lahars. Lahar-triggering mechanisms include: (1) flank collapse ofhydrothermally altered and unstable portions of the cone; (2) phreatic and phreatomagmatic eruptions favoring the generation of snow-rich slurries and hyperconcentrated stream flows; (3) suddenCrater Lake rim collapse, releasing large amounts of water inducing debris flows; and (4) eruptions that generate large volumes of tephra on snow-covered slopes, later remobilized by heavy rain. Two major lahars in the Onetapu sequence had a volume≥ 4 × 107 m3, roughly 1 to 2 orders of magnitude larger than the 1953event leading to the Tangiwai disaster (151 casualties). One of these lahars crossed over a lowinterfluve currently separating the Whangaehu River from a stream feeding the Tongariro River,sometime since peat accumulated between AD 1400 and AD 1660. A repetition of such a large-scaleevent would have devastating consequences on the infrastructure, economy and environment withinthe distal areas of the two catchments. The 1995–1996 eruptions were a timely reminder ofthe hazards posed by the volcano.
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  • 94
    Publication Date: 2018-07-17
    Description: Active seismic investigations along the Pacific margin off Peru were carried out using ocean bottom hydrophones and seismometers. The structure and the P-wave velocities of the obliquely subducting oceanic Nazca Plate and overriding South American Plate from 8°S to 15°S were determined by modelling the wide-angle seismic data combined with the analysis of reflection seismic data. Three detailed cross-sections of the subduction zone of the Peruvian margin and one strike-line across the Lima Basin are presented here. The oceanic crust of the Nazca Plate, with a thin pelagic sediment cover, ranging from 0–200 m, has an average thickness of 6.4 km. At 8°S it thins to 4 km in the area of Trujillo Trough, a graben-like structure. Across the margin, the plate boundary can be traced to 25 km depth. As inferred from the velocity models, a frontal prism exists adjacent to the trench axis and is associated with the steep lower slope. Terrigeneous sediments are proposed to be transported downslope due to gravitational forces and comprise the frontal prism, characterized by low seismic P-wave velocities. The lower slope material accretes against a backstop structure, which is defined by higher seismic P-wave velocities, 3.5–6.0 km s−1. The large variations in surface slope along one transect may reflect basal removal of upper plate material, thus steepening the slope surface. Subduction processes along the Peruvian margin are dominated by tectonic erosion indicated by the large margin taper, the shape and bending of the subducting slab, laterally varying slope angles and the material properties of the overriding continental plate. The erosional mechanisms, frontal and basal erosion, result in the steepening of the slope and consequent slope failure.
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  • 95
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    Springer
    In:  Theoretical and Computational Fluid Dynamics, 18 (2/4). pp. 97-103.
    Publication Date: 2018-01-19
    Type: Article , NonPeerReviewed
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  • 96
    Publication Date: 2019-09-23
    Description: A recent meta-analysis indicates that trophic cascades (indirect effects of predators on plants via herbivores) are weak in marine plankton in striking contrast to freshwater plankton (Shurin et al. 2002, Ecol. Lett., 5, 785–791). Here we show that in a marine plankton community consisting of jellyfish, calanoid copepods and algae, jellyfish predation consistently reduced copepods but produced two distinct, opposite responses of algal biomass. Calanoid copepods act as a switch between alternative trophic cascades along food chains of different length and with counteracting effects on algal biomass. Copepods reduced large algae but simultaneously promoted small algae by feeding on ciliates. The net effect of jellyfish on total algal biomass was positive when large algae were initially abundant in the phytoplankton, negative when small algae were dominant, but zero when experiments were analysed in combination. In contrast to marine systems, major pathways of energy flow in Daphnia-dominated freshwater systems are of similar chain length. Thus, differences in the length of alternative, parallel food chains may explain the apparent discrepancy in trophic cascade strength between freshwater and marine planktonic systems.
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  • 97
    Publication Date: 2017-05-10
    Description: We have developed a new 163-year bimonthly coral δ18O record from La Réunion (55°E, 21°S). Interannual variations in coral δ18O are coherent with the Southern Oscillation Index but not with regional sea surface temperature (SST). Correlations with the global SST field suggest more negative seawater δ18O (δ18Osw) during La Niña years. We propose that the signal results from changes in the strength of the South Equatorial Current and the Indonesian throughflow, which carry low salinity water. Multidecadal variations in coral δ18O are coherent with regional SST, but the sign is of opposite sense as expected from the coral δ18O-temperature relationship. This requires multidecadal changes in salinity large enough to overprint the SST contribution in the coral δ18O record. Our results suggest that multidecadal salinity variations result from modulations in the transport of the South Equatorial Current, which varies in response to the surface wind field and/or the Indonesian throughflow.
    Type: Article , PeerReviewed
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  • 98
    Publication Date: 2017-03-20
    Description: Polymetallic sulfide-sulfate mineralization enriched in Pb-Ag-As-Sb-Hg occurs in the Bransfield Strait, a late Tertiary-Quaternary marginal basin close to the Antarctic Peninsula. The mineralization is associated with bimodal volcanism and pelagic and volcaniclastic sediment in rifted continental crust. Hydrothermal precipitates have been recovered from two shallow (1,050–1,000 m water depth) submarine volcanoes (Hook Ridge and Three Sisters) in the Central Bransfield Strait. Mineralization at Hook Ridge consists of polymetallic sulfides, massive barite, and pyrite and marcasite crusts in semilithified pelagic and volcaniclastic sediment. Native sulfur commonly infills void space and cements the volcaniclastic sediment. The polymetallic sulfides are dominated by sphalerite with minor galena, enargite, tetrahedrite-tennantite, pyrite, chalcopyrite, and traces of orpiment cemented by barite and opal-A. The presence of enargite at Hook Ridge, the abundance of native sulfur, and the low Fe content of sphalerite indicate a high sulfur activity of the hydrothermal fluids responsible for mineralization. The sulfur isotopic composition of Hook Ridge precipitates documents the complexity of the sulfur sources in this hydrothermal system with variable influence of biological activity and possibly magmatic contributions. Homogenization temperatures and salinities of fluid inclusions in barite and opal-A suggest that boiling may have affected the hydrothermal fluids during their ascent. The discovery of massive barite-silica precipitates at another shallow marine volcano (Three Sisters volcano) attests to the potential for hydrothermal mineralization at other volcanic edifices in the area. The characteristics of the mineralization in the Bransfield Strait with rifting of continental crust, the presence of bimodal volcanism, including highly evolved felsic volcanic rocks, the association with sediments, and the Pb-Ag-As-Sb-Hg enrichment are similar to the setting of massive sulfide deposits in the Okinawa Trough, and distinct from those of sediment-dominated hydrothermal systems such as Escanaba Trough, Middle Valley, and Guaymas Basin. The geological setting of the Bransfield Strait is also broadly similar to that of some of the largest volcanogenic massive sulfide deposits in the ancient record, such as the Iberian Pyrite Belt.
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  • 99
    Publication Date: 2017-03-20
    Description: We present evidence for the origin of the Lyngen Gabbro of the Ordovician Lyngen Magmatic Complex in Troms, Northern Norway. The two magmatic suites of the Lyngen Gabbro strike parallel NNE-SSW, and have distinct magmatic signatures. We define these signatures by using major and trace-element analyses together with selected major- and trace-element mineral analyses and 143Nd/144Nd-isotope whole-rock analyses of gabbroic to tonalitic plutonic rocks from seven detailed cross-sections from this large gabbro-complex. The Western suite of the Lyngen Gabbro precipitated from magma that may have been derived from the same system as the associated volcanic rocks. The gabbros have high An-content (An〉90) of their plagioclases relative to co-existing mafic minerals. Together with somewhat high ɛNd(t) values (+6), this implies that the parental magmas were hydrous tholeiites similar to those found in back arc basins today. The Eastern suite, on the other hand, consist of cumulates that were precipitated from melts resembling those of ultra-depleted high-Ca boninitic magmas found in fore-arcs. Extremely high-An plagioclases (An〉95) co-exist with evolved mafic minerals and oxides, and the ɛNd(t) values are lower (+4) than in the Western suite. The Eastern suite has no volcanic counterpart, but dikes intersecting the suites have compositions that possibly represent its parental magma. The oceanic Rypdalen Shear Zone generally separates the two suites in the north, but several non-tectonic transitions from boninitic to tholeiitic signatures southwards advocate that the magmatism happened concurrently. The magmatic proximity between the suites, the hydrous magmatism and the absence of a silicic or calc-alkaline mature arc section, suggests that the Lyngen Gabbro formed in the Iapetus Ocean under conditions presently found in incipient arcs later emplaced as outer arc highs.
    Type: Article , PeerReviewed
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  • 100
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    Springer
    In:  Journal of Oceanography, 60 . pp. 719-729.
    Publication Date: 2017-10-11
    Description: Rising atmospheric CO2 and deliberate CO2 sequestration in the ocean change seawater carbonate chemistry in a similar way, lowering seawater pH, carbonate ion concentration and carbonate saturation state and increasing dissolved CO2 concentration. These changes affect marine plankton in various ways. On the organismal level, a moderate increase in CO2 facilitates photosynthetic carbon fixation of some phytoplankton groups. It also enhances the release of dissolved carbohydrates, most notably during the decline of nutrient-limited phytoplankton blooms. A decrease in the carbonate saturation state represses biogenic calcification of the predominant marine calcifying organisms, foraminifera and coccolithophorids. On the ecosystem level these responses influence phytoplankton species composition and succession, favouring algal species which predominantly rely on CO2 utilization. Increased phytoplankton exudation promotes particle aggregation and marine snow formation, enhancing the vertical flux of biogenic material. A decrease in calcification may affect the competitive advantage of calcifying organisms, with possible impacts on their distribution and abundance. On the biogeochemical level, biological responses to CO2 enrichment and the related changes in carbonate chemistry can strongly alter the cycling of carbon and other bio-active elements in the ocean. Both decreasing calcification and enhanced carbon overproduction due to release of extracellular carbohydrates have the potential to increase the CO2 storage capacity of the ocean. Although the significance of such biological responses to CO2 enrichment becomes increasingly evident, our ability to make reliable predictions of their future developments and to quantify their potential ecological and biogeochemical impacts is still in its infancy.
    Type: Article , PeerReviewed
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