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  • Public Library of Science  (34,884)
  • American Physical Society (APS)  (18,515)
  • American Geophysical Union
  • MDPI Publishing
  • 2010-2014  (63,701)
  • 1985-1989
  • 2013  (63,701)
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  • 1985-1989
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  • 1
    Publication Date: 2020-12-15
    Description: Long continuous seismic data recorded at five broadband seismic stations during 2006 at Campi Flegrei caldera have been analyzed. Introducing a coarse-grained method, we evaluate the time evolution of amplitude and polarization of the seismic noise in the frequency band common to long-period events. The series are modulated on tidal time scales: the root-mean square is basically dominated by solar contribution, while the azimuth of the polarization vector shows lunar diurnal and semidiurnal constituents. In addition, we find that in the frequency band common to long-period events the azimuths are polarized toward a specific area, suggesting that these persistent oscillations can be induced by the activity of the shallow geothermal reservoir.
    Description: Published
    Description: 2628–2637
    Description: JCR Journal
    Description: restricted
    Keywords: sustained hydrothermal tremor ; Campi Flegrei Caldera ; polarization analysis ; tidal modulation ; 04. Solid Earth::04.06. Seismology::04.06.08. Volcano seismology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: article
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  • 2
    Publication Date: 2020-11-26
    Description: Integrating seismic reflection profiles, well logs, and field evidence with GPS velocities from a network installed in Calabria, southern Italy, we have discovered that the Crotone basin is gliding toward the Ionian Sea over a buried viscous salt layer. This previously unknown megaslide (~1000 km2) is characterized by an onshore updip extensional domain and an offshore downdip toe-thrust rim. The GPS velocity from the Crotone station is significantly higher than velocities from other stations in the region and differently oriented. We ascribe at least part of the anomalous GPS velocity from the Crotone station to the seaward motion of the megaslide or part of it. From the GPS velocity and other evidence we obtain a viscosity of the buried salt layer within the known range of rock salt viscosity in nature.
    Description: Published
    Description: 4220-4224
    Description: 3.2. Tettonica attiva
    Description: JCR Journal
    Description: restricted
    Keywords: seismic reflection profiles ; Calabria ; salt ; landslide ; GPS ; 04. Solid Earth::04.04. Geology::04.04.04. Marine geology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: article
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  • 3
    Publication Date: 2021-06-25
    Description: In contrast to the seismic and infrasonic energy released from quiescent and erupting volcanoes, which have long been known to manifest episodes of highly periodic behavior, the spectral properties of volcanic gas flux time series remain poorly constrained, due to a previous lack of hightemporal resolution gas-sensing techniques. Here we report on SO2 flux measurements, performed on Mount Etna with a novel UV imaging technique of unprecedented sampling frequency (0.5 Hz), which reveal, for the first time, a rapid periodic structure in degassing from this target. These gas flux modulations have considerable temporal variability in their characteristics and involve two period bands: 40–250 and 500–1200 s. A notable correlation between gas flux fluctuations in the latter band and contemporaneous seismic root-mean-square values suggests that this degassing behavior may be generated by periodic bursting of rising gas bubble trains at the magma-air interface.
    Description: Published
    Description: 4818–4822
    Description: 1.2. TTC - Sorveglianza geochimica delle aree vulcaniche attive
    Description: JCR Journal
    Description: restricted
    Keywords: SO2 flux ; UV camera ; 04. Solid Earth::04.08. Volcanology::04.08.01. Gases
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: article
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  • 4
    Publication Date: 2019-07-16
    Description: A sediment core from the West Spitsbergen continental margin was studied to reconstruct climate and paleoceanographic variability during the last ~9 ka in the eastern Fram Strait (FS). Our multiproxy evidence suggests that the establishment of the modern oceanographic configuration in the eastern FS occurred stepwise, in response to the postglacial sea-level rise and the related onset of modern sea-ice production on the shallow Siberian shelves. The late Early and Mid-Holocene interval (9 to 5 ka) was generally characterized by relatively unstable conditions. High abundance of the subpolar planktic foraminifer species Turborotalita quinqueloba implies strong intensity of Atlantic Water (AW) inflow with high productivity and/or high AW temperatures, resulting in a strong heat flux to the Arctic. A series of short-lived cooling events (8.2, 6.9, and 6.1 ka) occurred superimposed on the warm late Early to Mid-Holocene conditions. Our proxy data imply that simultaneous to the complete postglacial flooding of Arctic shallow shelves and the initiation of modern sea-ice production, strong advance of polar waters initiated modern oceanographic conditions in the eastern FS at ~5.2 ka. The Late Holocene was marked by the dominance of the polar planktic foraminifer species Neogloboquadrina pachyderma, a significant expansion of sea ice/icebergs, and strong stratification of the water column. Although planktic foraminiferal assemblages as well as sea subsurface temperatures suggest a return of slightly strengthened advection of subsurface AW after 3 ka, a relatively stable cold-water layer prevailed at the sea surface, and the study site was probably located within the seasonally fluctuating marginal ice zone during the Neoglacial period.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 5
    Publication Date: 2016-02-02
    Description: Based on swath bathymetry, sediment echosounding, seismic profiling and sediment coring we present results of the RV „Polarstern“ cruise ARK-XIII/3 (2008) and RV "Araon" cruise ARA02B (2012), which investigated an area between the Chukchi Borderland and the East Siberian Sea between 165°W and 170°E. At the southern end of the Mendeleev Ridge, close to the Chukchi and East Siberian shelves, evidence is found for the existence of Pleistocene ice sheets/ice shelves, which have grounded several times in up to 1200 m present water depth. We found mega-scale glacial lineations associated with deposition of glaciogenic wedges and debris-flow deposits indicative of sub-glacial erosion and deposition close to the former grounding lines. Glacially lineated areas are associated with large-scale erosion, accentuated by a conspicuous truncation of pre-glacial strata typically capped with mostly thin layers of diamicton draped by pelagic sediments. Our tentative age model suggests that the youngest and shallowest grounding event of an ice sheet should be within Marine Isotope Stage (MIS) 3. The oldest and deepest event predates MIS 6. According to our results, ice sheets of more than one km in thickness continued onto, and likely centered over, the East Siberian Shelf. They were possibly linked to previously suggested ice sheets on the Chukchi Borderland and the New Siberian Islands. We propose that the ice sheets extended northward as thick ice shelves, which grounded on the Mendeleev Ridge to an area up to 78°N within MIS 5 and/or earlier. These results have important implication for the former distribution of thick ice masses in the Arctic Ocean during the Pleistocene. They are relevant for global sea-level variations, albedo, ocean-atmosphere heat exchange, freshwater export from the Arctic Ocean at glacial terminations and the formation of submarine permafrost. The existence of km-thick Pleistocene ice sheets in the western Arctic Ocean during glacial times predating that of the Last Glacial Maximum (LGM) also implies significantly different atmospheric circulation patterns, in particular availability and distribution of moisture during pre-LGM glaciations.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Conference , notRev
    Format: application/pdf
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  • 6
    Publication Date: 2020-02-12
    Description: Background The proportion of conserved DNA sequences with no clear function is steadily growing in bioinformatics databases. Studies of sequence and structural homology have indicated that many uncharacterized protein domain sequences are variants of functionally described domains. If these variants promote an organism's ecological fitness, they are likely to be conserved in the genome of its progeny and the population at large. The genetic composition of microbial communities in their native ecosystems is accessible through metagenomics. We hypothesize the co-variation of protein domain sequences across metagenomes from similar ecosystems will provide insights into their potential roles and aid further investigation. Methodology/Principal findings We calculated the correlation of Pfam protein domain sequences across the Global Ocean Sampling metagenome collection, employing conservative detection and correlation thresholds to limit results to well-supported hits and associations. We then examined intercorrelations between domains of unknown function (DUFs) and domains involved in known metabolic pathways using network visualization and cluster-detection tools. We used a cautious “guilty-by-association” approach, referencing knowledge-level resources to identify and discuss associations that offer insight into DUF function. We observed numerous DUFs associated to photobiologically active domains and prevalent in the Cyanobacteria. Other clusters included DUFs associated with DNA maintenance and repair, inorganic nutrient metabolism, and sodium-translocating transport domains. We also observed a number of clusters reflecting known metabolic associations and cases that predicted functional reclassification of DUFs. Conclusion/Significance Critically examining domain covariation across metagenomic datasets can grant new perspectives on the roles and associations of DUFs in an ecological setting. Targeted attempts at DUF characterization in the laboratory or in silico may draw from these insights and opportunities to discover new associations and corroborate existing ones will arise as more large-scale metagenomic datasets emerge.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , peerRev
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  • 7
    Publication Date: 2017-04-04
    Description: Since the second half of the 1990s, the eruptive activity of Mount Etna has provided evidence that both explosive and effusive eruptions display periodic variations in discharge and eruption style. In this work, a multiparametric approach, consisting of comparing volcanological, geophysical, and geochemical data, was applied to explore the volcano's dynamics during 2009–2011. In particular, temporal and/or spatial variations of seismicity (volcano-tectonic earthquakes, volcanic tremor, and long-period and very long period events), ground deformation (GPS and tiltmeter data), and geochemistry (SO2 flux, CO2 flux, CO2/SO2 ratio) were studied to understand the volcanic activity, as well as to investigate magma movement in both deep and shallow portions of the plumbing system, feeding the 2011 eruptive period. After the volcano deflation, accompanying the onset of the 2008–2009 eruption, a new recharging phase began in August 2008. This new volcanic cycle evolved from an initial recharge phase of the intermediate-shallower plumbing system and inflation, followed by (i) accelerated displacement in the volcano's eastern flank since April 2009 and (ii) renewal of summit volcanic activity during the second half of 2010, culminating in 2011 in a cyclic eruptive behavior with 18 lava fountains from New Southeast Crater (NSEC). Furthermore, supported by the geochemical data, the inversion of ground deformation GPS data and the locations of the tremor sources are used here to constrain both the area and the depth range of magma degassing, allowing reconstructing the intermediate and shallow storage zones feeding the 2011 cyclic fountaining NSEC activity.
    Description: Published
    Description: 3519–3539
    Description: 1.5. TTC - Sorveglianza dell'attività eruttiva dei vulcani
    Description: JCR Journal
    Description: restricted
    Keywords: Mt Etna ; seismology ; ground deformation ; geochemistry ; volcanology ; 04. Solid Earth::04.06. Seismology::04.06.08. Volcano seismology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 8
    Publication Date: 2017-04-04
    Description: We analyze data recorded from October 2010 to September 2011, during the ascending phase of the 24th solar cycle, from an Advanced Ionospheric Sounder-Istituto Nazionale di Geofisica e Vulcanologia ionosonde and a GPS Ionospheric Scintillation and total electron content (TEC) monitor scintillation receiver, colocated at low latitude in the Southern American longitudinal sector (Tucumán, 26.9°S, 294.6°E, magnetic latitude 15.5°S, Argentina). The site offers the opportunity to perform spread-F and GPS scintillation statistics of occurrence under the southern crest of the equatorial ionospheric anomaly. Spread-F signatures, classified into four types (strong range spread-F (SSF), range spread-F, frequency spread-F (FSF), and mixed spread-F), the phase and amplitude scintillation index (σΦ and S4, respectively), the TEC, and the rate of TEC parameter, marker of the TEC gradients, that can cause scintillations, are considered. The seasonal behavior results as follows: the occurrence of all four types of spread-F is higher in summer and lower in winter, while the occurrence of scintillations peaks at equinoxes in the postsunset sector and shows a minimum in winter. The correspondence between SSF and scintillations seems to be systematic, and a possible correlation between S4 and FSF peaks is envisaged at the terminator. The investigation focused also on two particular periods, from 12 to 16 March 2011 and from 23 to 29 September 2011, both characterized by the simultaneous presence of SSF signatures and scintillation phenomena, allowing to discuss the role of traveling ionospheric disturbances as a strong candidate causing ionospheric irregularities.
    Description: Published
    Description: 4483–4502
    Description: 1.7. Osservazioni di alta e media atmosfera
    Description: 3.9. Fisica della magnetosfera, ionosfera e meteorologia spaziale
    Description: JCR Journal
    Description: restricted
    Keywords: equatorial ionosphere ; scintillation ; spread-F ; 01. Atmosphere::01.02. Ionosphere::01.02.05. Wave propagation ; 01. Atmosphere::01.02. Ionosphere::01.02.06. Instruments and techniques ; 01. Atmosphere::01.02. Ionosphere::01.02.07. Scintillations ; 05. General::05.07. Space and Planetary sciences::05.07.99. General or miscellaneous
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 9
    Publication Date: 2017-04-04
    Description: Precipitation extremes are expected to increase in a warming climate, thus it is essential to characterise their potential future changes. Here we evalu- ate eight high-resolution Global Climate Model simulations in the twenti- eth century and provide new evidence on projected global precipitation ex- tremes for the 21st century. A significant intensification of daily extremes for all seasons is projected for the mid and high latitudes of both hemispheres at the end of the present century. For the subtropics and tropics, the lack of reliable and consistent estimations found for both the historical and fu- ture simulations might be connected with model deficiencies in the repre- sentation of organised convective systems. Low inter-model variability and good agreement with high-resolution regional observations are found for the twentieth century winter over the Northern Hemisphere mid and high lat- itudes.
    Description: Published
    Description: 4887–4892
    Description: 3.7. Dinamica del clima e dell'oceano
    Description: JCR Journal
    Description: open
    Keywords: extreme events ; precipitation ; cmip5 ; 01. Atmosphere::01.01. Atmosphere::01.01.02. Climate
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 10
    Publication Date: 2017-04-04
    Description: We investigate the effect of crystal size on the rheology of basaltic magmas by means of a rheometer and suspensions of silicon oil with natural magmatic crystals of variable size (from 63 to 0.5 mm) and volume fraction fi (from 0.03 to 0.6). At constant fi, finer suspensions display higher viscosities than coarser ones. Shear thinning (flow index n 〈 1) occurs at fi 〉 0.1–0.2 and is more pronounced (stronger departure from the Newtonian behavior) in finer suspensions. Maximum packing and average crystal size displays a nonlinear, positive correlation, while yield stress develops at fi 〉 0.2–0.3 irrespective of the crystal size. We incorporate our results into physical models for flow of lava and show that, with respect to lava flows containing coarser crystals, those with smaller crystals are expected to: 1) flow at lower velocity, 2) have a lower velocity gradient, and 3) be more prone to develop a region of plug flow. Our experimental results explain the observation that phenocryst-bearing and microlite-bearing lavas at Etna volcano (Italy) show smooth pahoehoe and rough aa’ surfaces, respectively.
    Description: FIRB-MIUR ‘‘Research and Development of New Technologies for Protection and Defense of Territory from Natural Risks’’
    Description: Published
    Description: 2661-2669
    Description: 2.3. TTC - Laboratori di chimica e fisica delle rocce
    Description: JCR Journal
    Description: restricted
    Keywords: rheology ; magmatic suspensions ; analogue model ; lava flo ; 04. Solid Earth::04.08. Volcanology::04.08.03. Magmas
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 11
    Publication Date: 2017-04-04
    Description: We synthesize environmental magnetic results for sediments from the Victoria Land Basin (VLB), which span a total stratigraphic thickness of 2.6 km and a ~17 Myr age range. We assess how magnetic properties record paleoclimatic, tectonic, and provenance variations or mixtures of signals resulting from these processes. The magnetic properties are dominated by large-scale magnetite concentration variations. In the late Eocene and early Oligocene, magnetite concentration variations coincide with detrital smectite concentration and crystallinity variations, which reflect paleoclimatic control on magnetic properties through influence on weathering regime; high magnetite and smectite concentrations indicate warmer and wetter climates and vice versa. During the early Oligocene, accelerated uplift of the Transantarctic Mountains gave rise to magnetic signatures that reflect progressive erosion of the Precambrian-Mesozoic metamorphic, intrusive, and sedimentary stratigraphic cover succession associated with unroofing of the adjacent Transantarctic Mountains. From the early Oligocene to the early Miocene, a consistent fining upward of magnetite particles through the recovered composite record likely reflects increased physical weathering with glacial grinding contributing to progressively finer grained Ferrar Dolerite-sourced magnetite. After 24 Ma, the magnetic properties of VLB sediments are primarily controlled by the weathering and erosion of McMurdo Volcanic Group rocks; increased volcanic glass contents contribute to the fining upward of magnetite grain size. Overall, long-term magnetic property variations record the first-order geological processes that controlled sedimentation in the VLB, including paleoclimatic, tectonic, provenance, and volcanic influences.
    Description: Published
    Description: 1845–1861
    Description: 2.2. Laboratorio di paleomagnetismo
    Description: JCR Journal
    Description: restricted
    Keywords: environmental magnetism ; Antarctica ; paleoclimate ; volcanism ; Ross Sea ; Cenozoic ; 03. Hydrosphere::03.01. General::03.01.06. Paleoceanography and paleoclimatology ; 04. Solid Earth::04.04. Geology::04.04.08. Sediments: dating, processes, transport ; 04. Solid Earth::04.04. Geology::04.04.10. Stratigraphy ; 04. Solid Earth::04.05. Geomagnetism::04.05.09. Environmental magnetism
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 12
    Publication Date: 2017-04-04
    Description: We present results from the first crustal seismic tomography for the southern Tyrrhenian area, which includes ocean bottom seismometer (OBS) data and a bathymetry correction. This area comprises Mt. Etna, the Aeolian Islands, and many volcanic seamounts, including the Marsili Seamount. The seismicity distribution in the area depends on the complex interaction between tectonics and volcanism. The 3-D velocity model presented in this study is obtained by the inversion of P wave arrival times from crustal earthquakes. We integrate travel time data recorded by an OBS network (Tyrrhenian Deep Sea Experiment), the SN-1 seafloor observatory, and the land network. Our model shows a high correlation between the P wave anomaly distribution and seismic and volcanic structures. Two main low-velocity anomalies underlie the central Aeolian Islands and Mt. Etna. The two volumes, which are related to the well-known active volcanism, are separated and located at different depths. This finding, in agreement with structural, petrography, and GPS data from literature, confirms the independence of the two systems. The strongest negative anomaly is found below Mt. Etna at the base of the crust, and we associate it with the deep feeding system of the volcano. We infer that most of the seismicity is generated in brittle rock volumes that are affected by the action of hot fluids under high pressure due to the active volcanism in the area. Lateral changes of velocity are related to a transition from the western to the central Aeolian Islands and to the passage from continental crust to the Tyrrhenian oceanic uppermost mantle.
    Description: Published
    Description: 3703–3719
    Description: 1.4. TTC - Sorveglianza sismologica delle aree vulcaniche attive
    Description: 3.3. Geodinamica e struttura dell'interno della Terra
    Description: JCR Journal
    Description: open
    Keywords: ocean bottom seismometers ; southern Tyrrhenian Sea ; seismic tomography ; Aeolian Islands ; Etna ; oceanic continental crust ; 04. Solid Earth::04.06. Seismology::04.06.06. Surveys, measurements, and monitoring ; 04. Solid Earth::04.06. Seismology::04.06.07. Tomography and anisotropy ; 04. Solid Earth::04.07. Tectonophysics::04.07.04. Plate boundaries, motion, and tectonics ; 04. Solid Earth::04.07. Tectonophysics::04.07.06. Subduction related processes ; 04. Solid Earth::04.07. Tectonophysics::04.07.07. Tectonics
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 13
    Publication Date: 2017-04-04
    Description: The crystal fabric of a lava has been analyzed for the first time by neutron texture diffraction. In this study we quantitatively investigate the crystallographic preferred orientation of feldspars in the Castello d’Ischia (Ischia Island, Italy) trachytic exogenous dome. The crystallographic preferred orientation was measured with the monochromatic neutron texture diffractometer SV7 at the Forschungszentrum Jülich in Germany and a Rietveld refinement was applied to the sum diffraction pattern. The complementary thin section analysis showed that the three-dimensional crystal shape and the corresponding shape preferred orientation are in agreement with the quantitative orientation distributions of the neutron texture data. The (0k0) crystallographic planes of the feldspars are roughly parallel to the local flow bands, whereas the other corresponding pole figures show that a pivotal rotation of the anorthoclase and sanidine crystals was active during the emplacement of this lava dome. In combination with scanning electron microscopy investigations, electron probe microanalysis, XRF, and X-ray diffraction, the Rietveld refinement of the neutron diffraction data indicates a slow cooling dynamic on the order of several months during their crystallization under subaerial conditions. Results attained here demonstrate that neutron texture diffraction is a powerful tool that can be applied to lava flows.
    Description: Published
    Description: 179-196
    Description: 3.5. Geologia e storia dei vulcani ed evoluzione dei magmi
    Description: 3.6. Fisica del vulcanismo
    Description: JCR Journal
    Description: restricted
    Keywords: neutron diffraction ; crystal fabric ; 04. Solid Earth::04.01. Earth Interior::04.01.04. Mineral physics and properties of rocks ; 04. Solid Earth::04.04. Geology::04.04.05. Mineralogy and petrology ; 04. Solid Earth::04.04. Geology::04.04.07. Rock geochemistry ; 04. Solid Earth::04.08. Volcanology::04.08.03. Magmas ; 04. Solid Earth::04.08. Volcanology::04.08.05. Volcanic rocks ; 05. General::05.02. Data dissemination::05.02.03. Volcanic eruptions
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 14
    Publication Date: 2017-04-04
    Description: The geomagnetic field is chaotic and can be characterized by a mean exponential time scale〈t〉after which it is no longer predictable. It is also ergodic, so time analyses can substitute the more difficult phase space analyses. Taking advantage of these two properties of the Earth’s magnetic field, a scheme of processing global geomagnetic models in time is presented, to estimate fluctuations of the time scale t. Here considering that the capability to predict the geomagnetic field is reduced over periods of geomagnetic jerks, we propose a method to detect these events over a long time span. This approach considers that epochs characterized by relative minima of fluctuations in time scale t, i.e., those periods when a geomagnetic field is less predictable, are possible jerk occurrence dates. We analyze the last 400 years of the geomagnetic field (covered by the Gufm1 model) to detect minima of fluctuations, i.e., epochs characterized by low values of the time scale.Most of the well known jerks are confirmed through this method and a few others have been suggested. Finally, we also identify some short periods when the field is less chaotic (more predictable) than usual, naming these periods as steady state geomagnetic regime, to underline their opposite behavior with respect to jerks.
    Description: Published
    Description: 839–850
    Description: 3.4. Geomagnetismo
    Description: JCR Journal
    Description: restricted
    Keywords: geomagnetic field ; geomagnetic jerks ; ergodicity ; chaos ; 04. Solid Earth::04.05. Geomagnetism::04.05.02. Geomagnetic field variations and reversals
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  • 15
    Publication Date: 2017-04-04
    Description: We have applied a tomographic imaging technique to the inversion of a DInSAR data set at Campi Flegrei caldera. This technique allowed us to determine the temporal and spatial distribution of volumetric strain sources up to 5 km depth. Results have shown complex spatial and temporal patterns, identifying important features that were not noticed before. The first result is the observation of positive strain sources (expansion) migrating upward (in 2000 and 2006). We have interpreted them as hot fluid batches injected at the bottom of the geothermal reservoir, migrating upward and reaching the surface. Furthermore we have identified an injection episode (in 1997), which was not recognized before. This batch did not reach the surface and probably dissipated by diffusion and lateral advection without producing significant ground uplift. The injection of fluid batches does not occur at the center of the caldera, but along its borders. The three identified injection episodes (in 1997, 2000 and 2006) occur in different points. In 2000 and 2006, the injected fluids migrated, subsequently, toward the center of the caldera. Our findings agrees with results of other geophysical and geochemical studies. These results suggest a new framework for the modeling of Campi Flegrei geothermal system and for the interpretation of data recorded by the multiparametric monitoring networks on the caldera.
    Description: Published
    Description: B08209
    Description: 1.4. TTC - Sorveglianza sismologica delle aree vulcaniche attive
    Description: JCR Journal
    Description: restricted
    Keywords: Campi Flegrei ; tomographic imaging ; 04. Solid Earth::04.08. Volcanology::04.08.06. Volcano monitoring
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  • 16
    Publication Date: 2020-02-24
    Description: During effusive eruptions, thermal satellite monitoring has proved well suited to map the thermal flux from lava flows. However, during lava fountaining events, thermal contributions from active flows and from the fountain itself cannot be separated in low resolution satellite data. Here using photogrammetry and atmospheric modeling techniques, we compare radiance estimates from long-range ground-based thermal camera data (from which the fountain can be excluded) with those from SEVIRI satellite images for a fountaining event at Mount Etna (12 August 2011). The radiant heat flux determined from the ground-based camera showed similar behavior to values retrieved from Spinning Enhanced Visible and Infrared Imager (SEVIRI); thus the SEVIRI signal is interpreted to be dominated by the lava flows, with minimal contribution from the fountain. Furthermore, by modeling the cooling phase of each pixel inundated by lava, the mean thickness and lava volume (~2.4 × 106 m3) derived from camera images are comparable with those calculated from SEVIRI (~2.8 × 106 m3).
    Description: Published
    Description: 5058–5063
    Description: 1.5. TTC - Sorveglianza dell'attività eruttiva dei vulcani
    Description: JCR Journal
    Description: restricted
    Keywords: Etna ; satellite ; thermal monitoring ; SEVIRI ; 04. Solid Earth::04.08. Volcanology::04.08.06. Volcano monitoring
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 17
    Publication Date: 2020-02-24
    Description: We present new insights into the short- and long-term thermal activity of the Nyiragongo lava lake by ground-based and satellite infrared thermal imagery recorded in the first half of 2012. This is the very first time in which FLIR camera and SEVIRI data have been compared at this volcano. Maximum temperatures recorded at the molten lava were of ~1180 K, whereas the lake skin remained always below ~734 K in areas far from the upwelling zone and below ~843 K in those proximal to the source region. Ground-based imagery yielded mean radiative power values between ~0.80 and 1.10 GW. Consistently, satellite observations showed similar mean values of 1.10 GW. Overall the thermal activity of the lava lake was quite variable along the three days of field measurements at both daily and intradaily scale. SEVIRI radiative power values retrieved for the January–June 2012 period revealed fluctuations within the same variability range suggesting that no significant changes of the lava lake area had occurred over the six months. Comparison with previous radiative power estimates showed that our data well agree with the general increasing trend recorded since the reappearance of the lava lake after the last flank eruption in 2002.
    Description: This study was funded by Zanskar Producciones, Cabildo Insular de Tenerife, and the Instituto Volcanológico de Canarias. We are grateful to EUMETSAT for providing us SEVIRI data and to NASA for the Landsat 7 image. Letizia Spampinato thanks Dr S. Giammanco for funding her research activity on the VIGOR project.
    Description: Published
    Description: 5771–5784
    Description: 1.5. TTC - Sorveglianza dell'attività eruttiva dei vulcani
    Description: JCR Journal
    Description: restricted
    Keywords: thermal imagery ; satellite thermal images ; 04. Solid Earth::04.08. Volcanology::04.08.06. Volcano monitoring
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  • 18
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    American Geophysical Union
    Publication Date: 2017-04-04
    Description: Sound is an effect produced by almost all earthquakes. Using a web-based questionnaire on earthquake effects that included questions relating to seismic sound, we collected 77,000 responses for recent shallow Italian earthquakes. An analysis of audibility attenuation indicated that the decrease of the percentage of respondents hearing the sound was proportional to the logarithm of the epicentral distance and linearly dependent on earthquake magnitude, in accordance with the behavior of ground displacement. Even if this result was based on Italian data, qualitative agreement with the results of theoretical displacement, and of a similar study based on French seismicity suggests wider validity. We also found that, given earthquake magnitude, audibility increased together with the observed macroseismic intensity, leading to the possibility of accounting for sound audibility in intensity assessment. Magnitude influenced this behavior, making small events easier to recognize, as suggested by their frequency content.
    Description: Published
    Description: L24301
    Description: 1.11. TTC - Osservazioni e monitoraggio macrosismico del territorio nazionale
    Description: JCR Journal
    Description: open
    Keywords: earthquake sound ; questionnaires ; macroseismic intensity ; ground displacement ; 04. Solid Earth::04.06. Seismology::04.06.06. Surveys, measurements, and monitoring
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 19
    Publication Date: 2017-04-04
    Description: In this study we map the distribution of the b-value of the Gutenberg-Richter law—as well as complementary seismicity parameters—along the fault responsible for the 2009 MW 6.1 L'Aquila earthquake. We perform the calculations for two independent aftershock sub-catalogs, before and after a stable magnitude of completeness is reached. We find a substantial spatial variability of the b-values, which range from 0.6 to 1.3 over the fault plane. The comparison between the spatial distribution of the b-values and the main-shock slip pattern shows that the largest slip occurs in normal-to-high b-values portion of the fault plane, while low b-value is observed close to the main-shock nucleation. No substantial differences are found in the b-value computed before and after the main-shock struck in the small region of the fault plane populated by foreshocks.
    Description: Published
    Description: L15304
    Description: 3.1. Fisica dei terremoti
    Description: JCR Journal
    Description: open
    Keywords: L'Aquila earthquake, b-value, heterogeneities, seimicity parameters. ; 04. Solid Earth::04.06. Seismology::04.06.01. Earthquake faults: properties and evolution
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 20
    Publication Date: 2017-04-04
    Description: Over the last four decades Etna has shown a high output rate through numerous eruptions. The volcano has displayed two eruptive behaviors. The first is characterized by effusive eruptions that efficiently drained the storage system and emitted large volumes of magma, the second behavior is related to lava fountains, erupting small magma batches, which are normally with high frequency and have been considered as precursors of major effusive eruptions. In this paper, we present an updated estimation of emitted volumes from Etna eruptions, which include the 38 lava fountain episodes that occurred from January 2011 to April 2013. These recent explosive episodes have been frequent, discharging significant magma volumes. Observing the steady trend of magma output over time, we present insights on expected erupted volumes. We highlight that the January 2011 –April 2013 lava fountains, efficiently drained the intermediate-shallow storage system and favored a balance between the incoming and outgoing magma.
    Description: Published
    Description: 6069–6073
    Description: 1.5. TTC - Sorveglianza dell'attività eruttiva dei vulcani
    Description: JCR Journal
    Description: open
    Keywords: Eruption mechanisms and flow emplacement ; Volcanic hazards and risks ; volcano monitoring ; erupted volumes ; 04. Solid Earth::04.08. Volcanology::04.08.08. Volcanic risk
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 21
    Publication Date: 2017-04-04
    Description: The three-dimensional (3-D) electron density representation of the ionosphere computed by the assimilative IRI-SIRMUP-P (ISP) model was tested using IONORT (IONOspheric Ray-Tracing), a software application for calculating a 3-D ray-tracing for high frequency (HF) waves in the ionospheric medium. A radio link was established between Rome (41.8°N, 12.5°E) in Italy, and Chania (35.7°N, 24.0°E) in Greece, within the ISP validity area, and for which oblique soundings are conducted. The ionospheric reference stations, from which the autoscaled foF2 and M(3000)F2 data and real-time vertical electron density profiles were assimilated by the ISP model, were Rome (41.8°N, 12.5°E) and Gibilmanna (37.9°N, 14.0°E) in Italy, and Athens (38.0°N, 23.5°E) in Greece. IONORT was used, in conjunction with the ISP and the International Reference Ionosphere (IRI) 3-D electron density grids, to synthesize oblique ionograms. The comparison between synthesized and measured oblique ionograms, both in terms of the ionogram shape and the maximum usable frequency characterizing the radio path, demonstrates both that the ISP model can more accurately represent real conditions in the ionosphere than the IRI, and that the ray-tracing results computed by IONORT are reasonably reliable.
    Description: Published
    Description: 167–179
    Description: 1.7. Osservazioni di alta e media atmosfera
    Description: 3.9. Fisica della magnetosfera, ionosfera e meteorologia spaziale
    Description: 5.4. Banche dati di geomagnetismo, aeronomia, clima e ambiente
    Description: JCR Journal
    Description: partially_open
    Keywords: Electron Density ; Ray-Tracing ; Oblique Ionogram ; IRI ; Assimilative Modelling ; 01. Atmosphere::01.02. Ionosphere::01.02.99. General or miscellaneous ; 01. Atmosphere::01.02. Ionosphere::01.02.04. Plasma Physics ; 01. Atmosphere::01.02. Ionosphere::01.02.05. Wave propagation ; 01. Atmosphere::01.02. Ionosphere::01.02.06. Instruments and techniques ; 05. General::05.01. Computational geophysics::05.01.99. General or miscellaneous ; 05. General::05.01. Computational geophysics::05.01.01. Data processing ; 05. General::05.01. Computational geophysics::05.01.03. Inverse methods
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 22
    Publication Date: 2017-04-04
    Description: We report on the first geochemical investigation of the Monticchio maar lakes (Mt. Vulture volcano, southern Italy) covering an annual cycle that aimed at understanding the characteristic features of the physical structures and dynamics of the two lakes. We provide the first detailed description of the lakes based on high-resolution CTD profiles, chemical and isotopic (H and O) compositions of the water, and the amounts of dissolved gases (e.g., He, Ar, CH4 and CO2). The combined data set reveals that the two lakes, which are separated by less than 200 m, exhibit different dynamics: one is a meromictic lake, where the waters are rich in biogenic and mantle-derived gases, while the other is a monomictic lake, which exhibits complete turnover of the water in winter and the release of dissolved gases. Our data strongly suggest that the differences in the dynamics of the two lakes are due to different density profiles affected by dissolved solutes, mainly Fe, which is strongly enriched in the deep water of the meromictic lake. A conceptual model of water balance was constructed based on the correlation between the chemical composition of the water and the hydrogen isotopic signature. Gas-rich groundwaters that feed both of the lakes and evaporation processes subsequently modify the water chemistry of the lakes. Our data highlight that no further potential hazardous accumulation of lethal gases is expected at the Monticchio lakes. Nevertheless, geochemical monitoring is needed to prevent the possibility of vigorous gas releases that have previously occurred in historical time.
    Description: Published
    Description: 1411–1434
    Description: 1.2. TTC - Sorveglianza geochimica delle aree vulcaniche attive
    Description: JCR Journal
    Description: restricted
    Keywords: geochemistry ; noble gases ; maar lake ; lake dynamics ; 04. Solid Earth::04.04. Geology::04.04.12. Fluid Geochemistry
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 23
    Publication Date: 2017-04-04
    Description: Integration of structural, stratigraphic, and paleomagnetic data from the N–S trending structures of the Ainsa Oblique Zone reveals the kinematics of the major thrust salient in the central Pyrenees. These structures experienced clockwise vertical axis rotations that vary from 70° in the east (Mediano anticline) to 55° in the west (Boltaña anticline). Clockwise vertical axis rotations of 60° to 45° occurred from early Lutetian to late Bartonian when the folds and thrusts of the Ainsa Oblique Zone developed. This vertical axis rotation stage resulted from a difference of about 50 km in the amount of displacement on the Gavarnie thrust and an accompanying change in structural style at crustal scale from the central to the western Pyrenees, related to the NE–SW trending pinch out of Triassic evaporites at its basal detachment. A second rotation event of at least 10° took place since Priabonian, as a result of a greater displacement of the Serres Marginals thrust sheet with respect to the Gavarnie thrust sheet above the Upper Eocene-Oligocene salts. The deduced kinematics demonstrates that the orogenic curvature of the central Pyrenees is a progressive curvature resulting from divergent thrust transport direction. Layer parallel shortening mesostructures and kilometer-scale folds also developed by a progressive curvature related to divergent shortening directions during vertical axis rotation. Rotation space problems were solved by along-strike extension which triggered the formation of transverse extensional faults and diapirs at the outer arcs of structural bends.
    Description: Published
    Description: 1142–1175
    Description: 1.2. TTC - Sorveglianza geochimica delle aree vulcaniche attive
    Description: JCR Journal
    Description: restricted
    Keywords: vertical-axis rotation ; thrust-sheet ; Eocene ; orogen ; 04. Solid Earth::04.04. Geology::04.04.09. Structural geology ; 04. Solid Earth::04.05. Geomagnetism::04.05.06. Paleomagnetism ; 04. Solid Earth::04.07. Tectonophysics::04.07.07. Tectonics
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 24
    Publication Date: 2017-04-04
    Description: Morphotectonic analysis and fault numeric modeling of uplifted marine terraces along the Ionian Sea coast of the Southern Apennines allowed us to place quantitative constraints on middle Pleistocene-Holocene deformation. Ten terrace orders uplifted to as much as +660 m were mapped along ~80 km of the Taranto Gulf coastline. The shorelines document both a regional and a local, fault-induced contribution to uplift. The intermingling between the two deformation sources is attested by three 10 km scale undulations superimposed on a 100 km scale northeastward tilt. The undulations spatially coincide with the trace of NW-SE striking transpressional faults that affected the coastal range during the early Pleistocene. To test whether fault activity continued to the present, we modeled the differential uplift of marine terraces as progressive elastic displacement above blind oblique-thrust ramps seated beneath the coast. Through an iterative and mathematically based procedure, we defined the best geometric and kinematic fault parameters as well as the number and position of fault segments. Fault numerical models predict two fault-propagation folds cored by blind thrusts with slip rates ranging from 0.5 to 0.7 mm/yr and capable of generating an earthquake with a maximum moment magnitude of 5.9–6.3. Notably, we find that the locus of predominant activity has repeatedly shifted between the two fault systems during time and that slip rates on each fault have temporally changed. It is not clear if the active deformation is seismogenic or dominated by aseismic creep; however, the modeled faults are embedded in an offshore transpressional belt that may have sourced historical earthquakes.
    Description: Published
    Description: 737-762
    Description: 3.2. Tettonica attiva
    Description: JCR Journal
    Description: partially_open
    Keywords: uplifted marine terraces ; fault modeling ; fault-propagation folds ; middle-late Pleistocene ; active transpression ; Southern Italy ; 04. Solid Earth::04.04. Geology::04.04.01. Earthquake geology and paleoseismology ; 04. Solid Earth::04.04. Geology::04.04.03. Geomorphology ; 04. Solid Earth::04.04. Geology::04.04.09. Structural geology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 25
    Publication Date: 2017-04-04
    Description: Adria is a small region surrounded by three mountain belts: the Alps, the Apennines, and the Dinarides, built up by long evolution of subduction and collisional systems. We present 253 shear wave splitting measurements obtained by studying more than 100 teleseismic events for 12 stations. SKS splitting measurements show 3-D complexity and quite strong upper mantle deformation. We carefully analyzed results in terms of back azimuthal coverage and interpret measurements as related to Adria rotation and to subductions evolution. In the northern part of Adria, the anisotropy pattern follows the arcuate shape of the Alps; the same pattern, parallel to the mountains, occurs along the Apennines, but fast directions show a sudden change in the Adria foreland. This lateral variation has been analyzed to isolate a distinct Adria mantle anisotropic pattern, which is identified as NE-SW fast direction along the western microplate boundary and as N-S fast direction at Trieste. This pattern might be induced by drag effect of the counterclockwise rotation of Adria lithosphere that behaves as an independent microplate as identified by GPS data. Our measurements suggest that the geodynamic process that generated the Alps is more efficient deforming a larger volume of mantle than its Apennine counterpart. Moreover, the mantle circulation we hypothesize looking at the regional-scale patterns of anisotropy requires the existence of an escape route beneath the Alps-Apennines transition, through which the mantle flows and feed circulation in the Tyrrhenian mantle system as suggested by previous geodynamic models and as seen by some tomographic studies.
    Description: Published
    Description: 5814–5826
    Description: 3.3. Geodinamica e struttura dell'interno della Terra
    Description: JCR Journal
    Description: restricted
    Keywords: Seismic Anisotropy ; Adriatic region ; 04. Solid Earth::04.01. Earth Interior::04.01.02. Geological and geophysical evidences of deep processes ; 04. Solid Earth::04.06. Seismology::04.06.07. Tomography and anisotropy ; 04. Solid Earth::04.07. Tectonophysics::04.07.06. Subduction related processes ; 05. General::05.02. Data dissemination::05.02.02. Seismological data
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 26
    Publication Date: 2019-07-17
    Description: The stable oxygen isotope ratio (δ18O) in precipitation is an integrated tracer of atmospheric processes worldwide. Since the 1990s, an intensive effort has been dedicated to studying precipitation isotopic composition at more than 20 stations in the Tibetan Plateau (TP) located at the convergence of air masses between the westerlies and Indian monsoon. In this paper, we establish a database of precipitation δ18O and use different models to evaluate the climatic controls of precipitation δ18O over the TP. The spatial and temporal patterns of precipitation δ18O and their relationships with temperature and precipitation reveal three distinct domains, respectively associated with the influence of the westerlies (northern TP), Indian monsoon (southern TP), and transition in between. Precipitation δ18O in the monsoon domain experiences an abrupt decrease in May and most depletion in August, attributable to the shifting moisture origin between Bay of Bengal (BOB) and southern Indian Ocean. High-resolution atmospheric models capture the spatial and temporal patterns of precipitation δ18O and their relationships with moisture transport from the westerlies and Indian monsoon. Only in the westerlies domain are atmospheric models able to represent the relationships between climate and precipitation δ18O. More significant temperature effect exists when either the westerlies or Indian monsoon is the sole dominant atmospheric process. The observed and simulated altitude-δ18O relationships strongly depend on the season and the domain (Indian monsoon or westerlies). Our results have crucial implications for the interpretation of paleoclimate records and for the application of atmospheric simulations to quantifying paleoclimate and paleo-elevation changes.
    Repository Name: EPIC Alfred Wegener Institut
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  • 27
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    American Geophysical Union
    In:  EPIC3Journal of Geophysical Research – Oceans, American Geophysical Union, 118, pp. 1-13, ISSN: 0148-0227
    Publication Date: 2019-07-17
    Description: Phycobiliproteins are a family of water-soluble pigment proteins that play an important role as accessory or antenna pigments and absorb in the green part of the light spectrum poorly used by chlorophyll a. The phycoerythrins (PEs) are one of four types of phycobiliproteins that are generally distinguished based on their absorption properties. As PEs are water soluble, they are generally not captured with conventional pigment analysis. Here we present a statistical model based on in situ measurements of three transatlantic cruises which allows us to derive relative PE concentration from standardized hyperspectral underwater radiance measurements (Lu). The model relies on Empirical Orthogonal Function (EOF) analysis of Lu spectra and, subsequently, a Generalized Linear Model with measured PE concentrations as the response variable and EOF loadings as predictor variables. The method is used to predict relative PE concentrations throughout the water column and to calculate integrated PE estimates based on those profiles.
    Repository Name: EPIC Alfred Wegener Institut
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  • 28
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    American Geophysical Union
    In:  EPIC3J. Geophys. Res. Atmospheres, American Geophysical Union, 118(16), pp. 8787-8813, ISSN: 2169-8996
    Publication Date: 2017-10-20
    Description: A nonhydrostatic model (NH3D) is used for idealized dry quasi 2-D simulations of Arctic cold-air outbreaks using horizontal grid spacings between 1.25 and 60 km. Despite the idealized setup, the model results agree well with observations over Fram Strait. It is shown that an important characteristic of the flow regime during cold-air outbreaks is an ice-breeze jet (IBJ) with a maximum wind speed exceeding often the large-scale geostrophic wind speed. According to the present simulations, which agree very well with those of another nonhydrostatic mesoscale model (METRAS), the occurrence, strength, and horizontal extent L of this jet depend strongly on the external forcing and especially on the direction of the large-scale geostrophic wind relative to the orientation of the ice edge. The latter dependency is explained by the effects of the thermally induced geostrophic wind over open water and Coriolis force. It is found that coarse-resolution runs underestimate the strength of the jet. This underestimation has important consequences to the surface fluxes of heat and momentum, which are also underestimated by about 10–15% on average over the region between the ice edge and 120–180 km downstream. Our results suggest that a grid spacing of about L/7 is required (about 10–30 km) to simulate the IBJ strength with an accuracy of at least 10%. Thus, the results of large-scale models as well might contain uncertainties with regard to the simulated IBJ strength which would influence the energy budget in a large region along the marginal sea ice zones.
    Repository Name: EPIC Alfred Wegener Institut
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  • 29
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    American Geophysical Union
    In:  EPIC3JOURNAL OF GEOPHYSICAL RESEARCH: OCEANS, American Geophysical Union, 118, pp. 2640-2652
    Publication Date: 2019-07-17
    Description: Coastal polynyas are areas in an ice-covered ocean where the ice cover is exported, mostly by off-shore winds. The resulting reduction of sea ice enables an enhanced ocean-atmosphere heat transfer. Once the water temperatures are at the freezing point, further heat loss induces sea ice production. The heat exchange and ice production in coastal polynyas in the southwestern Weddell Sea is addressed using the Finite-Element Sea-ice Ocean Model, a primitive-equation, hydrostatic ocean circulation model coupled with a dynamic-thermodynamic sea-ice model, which allows to quantify the amount of heat associated with cooling of the water column. Three important polynya regions are identified: at Brunt Ice Shelf, at Ronne Ice Shelf and along the southern part of the Antarctic Peninsula. Multiyear winter means (May–September 1990–2009) give an upward heat flux to the atmosphere of 311 W/m^2 in the Brunt polynyas, 511 W/m^2 in Ronne Polynya and 364 W/m^2 in the Antarctic Peninsula polynyas, whereof 57 W/m^2, 49 W/m^2 and 48 W/m^2, respectively, are supplied as oceanic heat flux from deeper layers. The mean winter sea ice production is 7.2 cm/d in the Brunt polynyas corresponding to an ice volume of 1.3x10^10 m^3/winter, 13.2 cm/d at Ronne polynya (4.4x10^10 m^3/winter), and 9.2 cm/d in the Antarctic Peninsula polynyas (2.1x10^10 m^3/winter). The heat flux to the atmosphere inside polynyas is 7 to 9 times higher than the heat flux in the adjacent area; polynya ice production per unit area exceeds adjacent values by a factor of 9 to 14.
    Repository Name: EPIC Alfred Wegener Institut
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  • 30
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    American Geophysical Union
    In:  EPIC3EOS Transactions, American Geophysical Union, 94(45), pp. 409-420, ISSN: 2324-9250
    Publication Date: 2014-04-14
    Description: Generic Mapping Tools (GMT) is an open-source software package for the analysis and display of geoscience data, helping scientists to analyze, interpolate, filter, manipulate, project, and plot time series and gridded data sets. The GMT toolbox includes about 80 core and 40 supplemental program modules sharing a common set of command options, file structures, and documentation. Its power to process data and produce publication-quality graphic presentations has made it vital to a large scientific community that now includes more than 25,000 individual users. GMT's website (http://gmt.soest.hawaii.edu/) exceeds 20,000 visits per month, and server logs show roughly 2000 monthly downloads.
    Repository Name: EPIC Alfred Wegener Institut
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  • 31
    Publication Date: 2019-07-16
    Description: The Lena River Delta in Northern Yakutia forms one of the largest deltas in the Arctic and its catchment area (2 430 000 km2) is one of the largest in the whole of Eurasia. The Lena River distributes water and sediment in four main channels before discharging in total about 30 km3 of water through the delta into the Arctic Ocean every year and its discharge has been observed to be increasing. The goal of this presentation is to characterize the hydrologic processes that are strongly affected by a transient climate component- the permafrost. Permafrost plays a major role for storage and release of water to rivers and surface and subsurface water bodies. Conversely, the coupled water and heat fluxes in the atmosphere and below ground have a marked influence on the permafrost’s thermal regime. Our study site, the Lena River Delta, is also one of the coldest and driest places on Earth, with mean annual air temperatures of about -13 °C, a large annual air temperature range of about 44 °C and summer precipitation usually less than 150 mm. Very cold continuous permafrost of about −8.6 °C (11 m depth) underlays the area between about 400 and 600 m below surface and since 2006 the permafrost has warmed than 1 °C at 10.7 m. Roughly half of the land surface is dominated by wet surfaces, such as polygons, ponds and thermokarst lakes. This contribution summarizes past and ongoing research on hydrologic processes across spatial scales, from microtopographic processes of polygonal tundra to regional scale deltaic processes to assess short and long term changes in water fluxes. We quantify unfrozen water in soils, streams and river discharges and water bodies’ storage at larger scales. Water bodies were mapped using optical and radar satellite data with resolutions of 4 m or better, Landsat-5 TM at 30 m and the MODIS water mask at 250 m resolution. Ponds, i. e. water bodies with surface are smaller than 104 m, make over 95 % of the total number of water bodies and are not resolved in Landsat-scale land cover classifications. Ponds are generally well mixed and experience high water temperatures up to 23 °C during the summer and are, therefore, hotspots for biological activity and CO2 emission. The ponds in the study area freeze completely in winter, whereas the deeper thermokarst lakes do not freeze to the bottom, with implications for coupling of the permafrost to the atmosphere. These deep thermokarst lakes are thermally stratified during winter and reach maximum water temperatures of up to 19 °C during summer. The summer water balance at the catchment scale was found to be mainly controlled by vertical fluxes (precipitation and evapotranspiration). On the other hand, redistribution of storage water due to lateral fluxes takes place within the microtopography of polygonal tundra. The long-term summer storage (precipitation minus evapotranspiration) from 1958-2011 indicates a reasonably balance on the polygonal tundra with an average surplus of 5 mm, but it is also characterized by high interannual variability due to precipitation input. During negative water balance years where evapotranspiration exceeds precipitation, shallower water bodies dry out. The extent of wetlands and water bodies will shift with changes in vertical water fluxes as well as permafrost warming and thaw. Thus, water bodies can serve as sentinels of environmental change and we present applicable remote-sensing observations and upscaling methods
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  • 32
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    American Geophysical Union
    In:  EPIC3Fall meeting, San Francisco, 2013-12-09-2013-12-13American Geophysical Union
    Publication Date: 2019-07-16
    Description: The northern permafrost region contains approximately 50% of the estimated global below-ground organic carbon pool and more than twice as much as is contained in the current atmospheric carbon pool. The sheer size of this carbon pool, together with the large amplitude of predicted arctic climate change implies that there is a high potential for global-scale feedbacks from arctic climate change if these carbon reservoirs are destabilized. Nonetheless, significant gaps exist in our current state of knowledge that prevent us from producing accurate assessments of the vulnerability of the arctic permafrost to climate change, or of the implications of future climate change for global greenhouse gas (GHG) emissions. In order o close these gaps, the key objectives of PAGE21 are: - to improve our understanding of the processes affecting the size of the arctic permafrost carbon and nitrogen pools - to produce, assemble and assess high-quality datasets in order to develop and evaluate representations of permafrost and related processes in global models, - to improve these models accordingly, - to use these models to reduce the uncertainties in feedbacks from arctic permafrost to global change. The concept of PAGE21 is to directly address these questions through a close interaction between monitoring activities, process studies and modeling on the pertinent temporal and spatial scales. PAGE21 is determined to break down the traditional barriers in permafrost sciences between observational and model-supported site studies and large-scale climate modeling.
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  • 33
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    American Geophysical Union
    In:  EPIC3Fall meeting, San Francisco, 2013-12-09-2013-12-13American Geophysical Union
    Publication Date: 2019-07-16
    Description: A challenging problem in climate modeling is how to deal with interactions and feedbacks across a multiplicity of spatial scales, and how to improve our understanding of the role played by local soil heterogeneities in the climate system. This is of particular interest in northern peatlands, because of the large amount of carbon stored in the soil. Greenhouse gas (GHG) fluxes, such as methane, carbon dioxide and water vapor, vary largely within the environment, as an effect of the small scale processes that characterize the landscape. It is then essential to consider the local heterogeneous behavior of the system components in order to properly estimate water and carbon balances. We propose a novel method to fill the scaling gap from local mechanistic models to large scale mean field approximations. We developed a surface model for peatlands working at the landscape scale, which is able to show the impact of surface microtopography in modeling greenhouse gas fluxes. We tuned our landscape-scale model with data from a peatland site in the Komi Republic of Russia. We simulate surface microtopography and hydrology, and we couple it to a process-based model for methane emissions from the soil (Walter and Heiman, 1996). By partitioning the space in smaller subunits and then analyzing the statistical properties of the tiling, we are able to resolve the small scale processes and investigate their effects at larger scales. We not only investigate the influence of the hummocky surface on GHG emissions, but we are also able to simulate how complex hydrological interactions happening within the system at a subgrid scale affect the landscape-scale land-atmosphere GHG fluxes. We force our model climatology with data from the CMIP5 experiments. Future projections use forcing from the RCP 8.5 scenario, in order to investigate the impact of microrelieves on the future carbon cycle. We also explore potential dynamical feedbacks with the atmospheric water cycle and energy balance by coupling the surface model with an idealized box model of the atmosphere.
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  • 34
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    American Geophysical Union
    In:  EPIC3AGU Fall Meeting, San Francisco, 2013-12-09-2013-12-13San Francisco, American Geophysical Union
    Publication Date: 2019-07-17
    Description: Permafrost thaw is often perceived as a slow process dominated by press disturbances such as gradual active layer thickening. However, various pulse disturbances such as thermokarst formation can substantially increase the rate of permafrost thaw and result in rapid landscape change on sub-decadal to decadal time scales. Other disturbances associated with permafrost thaw are even more dynamic and unfold on sub-annual timescales, such as catastrophic thermokarst lake drainage. The diversity of processes results in complex feedbacks with soil carbon pools, biogeochemical cycles, hydrology, and flora and fauna, and requires a differentiated approach when quantifying how these ecosystem componentsare affected,how vulnerablethey are to rapid change, and what regional to global scale impacts result. Here we show quantitative measurements for three examples of rapid pulse disturbances in permafrost regions as observed with remote sensing data time series: The formation of a mega thaw slump (〉50 ha) in syngenetic permafrost in Siberia, the formation of new thermokarst ponds in ice-rich permafrost regions in Alaska and Siberia, and the drainage of thermokarst lakes along a gradient of permafrost extent in Western Alaska. The surprising setting and unabated growth of the mega thaw slump during the last 40 years indicates that limited information on panarctic ground ice distribution, abundance, and vulnerability remains a key gap for reliable projections of thermokarst and thermo-erosion impacts, and that the natural limits on the growth and size of thaw slumps are still poorly understood. Observed thermokarst pond formation and expansion in our study regions was closely tied to ice-rich permafrost terrain, such as syngenetic Yedoma uplands, but was also found in old drained thermokarst lake basins with epigenetic permafrost and shallow drained thermokarst lake basins whose ground ice had not been depleted by the prior lake phase. The very different substrates in which new ponds have been forming indicate a broad range of possible biogeochemical feedbacks that require further study. Finally, thermokarst lake drainage observed in regions of continuous permafrost shows that local permafrost degradation, such as thermo-erosional gully formation, may increase permafrost extent in a region, in particular by new permafrost aggradation in freshly exposed, refreezing lake basin sediments. Thermokarst lake drainage across all types of permafrost extent increases habitat diversity, is important for regional biogeochemical cycling, and results in carbon sequestration. While all three disturbance types differ in spatial scale and current abundance, they also point at specific vulnerabilities of permafrost landscapes that are tied to local factors such as ground ice, highlight critical knowledge gaps for predictive ecosystem and biogeochemical models, and indicate the potential for rapid, substantial, and surprising changes in a future warmer Arctic.
    Repository Name: EPIC Alfred Wegener Institut
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  • 35
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2012. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geochemistry Geophysics Geosystems 13 (2012): Q0AF07, doi:10.1029/2012GC004211.
    Description: The output of gas and tephra from volcanoes is an inherently disorganized process that makes reliable flux estimates challenging to obtain. Continuous monitoring of gas flux has been achieved in only a few instances at subaerial volcanoes, but never for submarine volcanoes. Here we use the first sustained (yearlong) hydroacoustic monitoring of an erupting submarine volcano (NW Rota-1, Mariana arc) to make calculations of explosive gas flux from a volcano into the ocean. Bursts of Strombolian explosive degassing at the volcano summit (520 m deep) occurred at 1–2 min intervals during the entire 12-month hydrophone record and commonly exhibited cyclic step-function changes between high and low intensity. Total gas flux calculated from the hydroacoustic record is 5.4 ± 0.6 Tg a−1, where the magmatic gases driving eruptions at NW Rota-1 are primarily H2O, SO2, and CO2. Instantaneous fluxes varied by a factor of ∼100 over the deployment. Using melt inclusion information to estimate the concentration of CO2 in the explosive gases as 6.9 ± 0.7 wt %, we calculate an annual CO2 eruption flux of 0.4 ± 0.1 Tg a−1. This result is within the range of measured CO2 fluxes at continuously erupting subaerial volcanoes, and represents ∼0.2–0.6% of the annual estimated output of CO2from all subaerial arc volcanoes, and ∼0.4–0.6% of the mid-ocean ridge flux. The multiyear eruptive history of NW Rota-1 demonstrates that submarine volcanoes can be significant and sustained sources of CO2 to the shallow ocean.
    Description: The National Oceanic and Atmospheric Administration Office of Ocean Exploration and Research, the NOAA Vents Program, and the National Science Foundation (OCE-0751776) for support.
    Description: 2013-05-29
    Keywords: Gas flux ; Ocean acoustics ; Seafloor volcanism
    Repository Name: Woods Hole Open Access Server
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  • 36
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2012. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Reviews of Geophysics 50 (2012): RG4003, doi:10.1029/2012RG000389.
    Description: The most important sources of atmospheric moisture at the global scale are herein identified, both oceanic and terrestrial, and a characterization is made of how continental regions are influenced by water from different moisture source regions. The methods used to establish source-sink relationships of atmospheric water vapor are reviewed, and the advantages and caveats associated with each technique are discussed. The methods described include analytical and box models, numerical water vapor tracers, and physical water vapor tracers (isotopes). In particular, consideration is given to the wide range of recently developed Lagrangian techniques suitable both for evaluating the origin of water that falls during extreme precipitation events and for establishing climatologies of moisture source-sink relationships. As far as oceanic sources are concerned, the important role of the subtropical northern Atlantic Ocean provides moisture for precipitation to the largest continental area, extending from Mexico to parts of Eurasia, and even to the South American continent during the Northern Hemisphere winter. In contrast, the influence of the southern Indian Ocean and North Pacific Ocean sources extends only over smaller continental areas. The South Pacific and the Indian Ocean represent the principal source of moisture for both Australia and Indonesia. Some landmasses only receive moisture from the evaporation that occurs in the same hemisphere (e.g., northern Europe and eastern North America), while others receive moisture from both hemispheres with large seasonal variations (e.g., northern South America). The monsoonal regimes in India, tropical Africa, and North America are provided with moisture from a large number of regions, highlighting the complexities of the global patterns of precipitation. Some very important contributions are also seen from relatively small areas of ocean, such as the Mediterranean Basin (important for Europe and North Africa) and the Red Sea, which provides water for a large area between the Gulf of Guinea and Indochina (summer) and between the African Great Lakes and Asia (winter). The geographical regions of Eurasia, North and South America, and Africa, and also the internationally important basins of the Mississippi, Amazon, Congo, and Yangtze Rivers, are also considered, as is the importance of terrestrial sources in monsoonal regimes. The role of atmospheric rivers, and particularly their relationship with extreme events, is discussed. Droughts can be caused by the reduced supply of water vapor from oceanic moisture source regions. Some of the implications of climate change for the hydrological cycle are also reviewed, including changes in water vapor concentrations, precipitation, soil moisture, and aridity. It is important to achieve a combined diagnosis of moisture sources using all available information, including stable water isotope measurements. A summary is given of the major research questions that remain unanswered, including (1) the lack of a full understanding of how moisture sources influence precipitation isotopes; (2) the stationarity of moisture sources over long periods; (3) the way in which possible changes in intensity (where evaporation exceeds precipitation to a greater of lesser degree), and the locations of the sources, (could) affect the distribution of continental precipitation in a changing climate; and (4) the role played by the main modes of climate variability, such as the North Atlantic Oscillation or the El Niño–Southern Oscillation, in the variability of the moisture source regions, as well as a full evaluation of the moisture transported by low-level jets and atmospheric rivers.
    Description: Luis Gimeno would like to thank the Spanish Ministry of Science and FEDER for their partial funding of this research through the project MSM. A. Stohl was supported by the Norwegian Research Council within the framework of the WATER‐SIP project. The work of Ricardo Trigo was partially supported by the FCT (Portugal) through the ENAC project (PTDC/AAC-CLI/103567/2008).
    Description: 2013-05-08
    Keywords: Hydrological cycle ; Ocean evaporation ; Precipitation ; Sources of moisture ; Terrestrial evaporation ; Transport of moisture
    Repository Name: Woods Hole Open Access Server
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  • 37
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2012. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Global Biogeochemical Cycles 26 (2012): GB4018, doi:10.1029/2011GB004192.
    Description: A series of seasonally distributed measurements from the six largest Arctic rivers (the Ob', Yenisey, Lena, Kolyma, Yukon and Mackenzie) was used to examine the magnitude and significance of Arctic riverine DIC flux to larger scale C dynamics within the Arctic system. DIC concentration showed considerable, and synchronous, seasonal variation across these six large Arctic rivers, which have an estimated combined annual DIC flux of 30 Tg C yr−1. By examining the relationship between DIC flux and landscape variables known to regulate riverine DIC, we extrapolate to a DIC flux of 57 ± 9.9 Tg C yr−1for the full pan-arctic basin, and show that DIC export increases with runoff, the extent of carbonate rocks and glacial coverage, but decreases with permafrost extent. This pan-arctic riverine DIC estimate represents 13–15% of the total global DIC flux. The annual flux of selected ions (HCO3−, Na+, Ca2+, Mg2+, Sr2+, and Cl−) from the six largest Arctic rivers confirms that chemical weathering is dominated by inputs from carbonate rocks in the North American watersheds, but points to a more important role for silicate rocks in Siberian watersheds. In the coastal ocean, river water-induced decreases in aragonite saturation (i.e., an ocean acidification effect) appears to be much more pronounced in Siberia than in the North American Arctic, and stronger in the winter and spring than in the late summer. Accounting for seasonal variation in the flux of DIC and other major ions gives a much clearer understanding of the importance of riverine DIC within the broader pan-arctic C cycle.
    Description: Funding for this work was provided through NSF-OPP-0229302 and NSF-OPP-0732985. Additional support to SET was provided by an NSERC Postdoctoral Fellowship.
    Description: 2013-06-14
    Keywords: Arctic ; Dissolved inorganic carbon ; Ocean acidification ; Permafrost ; River biogeochemistry ; Weathering
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  • 38
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2000. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 105, no. B2 (2000): 2721-2736, doi:10.1029/1999JB900253.
    Description: Using multibeam bathymetry, we identified 86 axial and 1290 off-axis seamounts (near-circular volcanoes with heights ≥70 m) in an area of 75,000 km2 on the western flank of the Mid-Atlantic Ridge (MAR), 25°25′N to 27°10′N, extending ∼400 km from the inner rift valley floor to ∼29 Ma crust. Our study shows that seamounts are a common morphological feature of the North Atlantic seafloor. Seamount-producing volcanism occurs primarily on the inner rift valley floor, and few, if any, seamounts are formed on the rift valley walls or the ridge flank. The high abundance of off-axis seamounts is consistent with 1–3 km wide sections of oceanic crust being transferred intact from the axial valley to the ridge flank on crust 〉4 Ma. Significant changes in seamount abundances, sizes, and shapes are attributed to the effects of faulting between ∼0.6 and 2 m.y. off axis in the lower rift valley walls. Few seamounts are completely destroyed by (inward facing) faults, and population abundances are similar to those on axis. However, faulting reduces the characteristic height of the seamount population significantly. In the upper portions of the rift valley, on 2–4 Ma crust, crustal aging processes (sedimentation and mass wasting), together with additional outward facing faults, destroy and degrade a significant number of seamounts. Beyond the crest of the rift mountains (〉4 Ma crust) faulting is no longer active, and changes in the off-axis seamount population reflect crustal aging processes as well as temporal changes in seamount production that occurred at the ridge axis. Estimates of population density for off-axis seamounts show a positive correlation to crustal thickness inferred from analysis of gravity data, suggesting that increased seamount production accompanies increased magma input at the ridge axis. We find no systematic variations in seamount population density along isochron within individual ridge segments. Possible explanations are that along-axis production of seamounts is uniform or that seamount production is enhanced in some regions (e.g., segment centers), but many seamounts do not meet our counting criteria because they are masked by younger volcanic eruptions and low-relief flows.
    Description: This research was supported by ONR grants N00014-93-1- 1153(AASERT),N 00014-94-1-0319N, 00014-94-1-0466 and N00014- 90-J-1621. B. E. Tucholke was also supported by NSF grant OCE 95- 03561.
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  • 39
    Publication Date: 2022-05-25
    Description: © The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS ONE 8 (2013): e56393, doi:10.1371/journal.pone.0056393.
    Description: Evolutionary constraints which limit the forces produced during bell contractions of medusae affect the overall medusan morphospace such that jet propulsion is limited to only small medusae. Cubomedusae, which often possess large prolate bells and are thought to swim via jet propulsion, appear to violate the theoretical constraints which determine the medusan morphospace. To examine propulsion by cubomedusae, we quantified size related changes in wake dynamics, bell shape, swimming and turning kinematics of two species of cubomedusae, Chironex fleckeri and Chiropsella bronzie. During growth, these cubomedusae transitioned from using jet propulsion at smaller sizes to a rowing-jetting hybrid mode of propulsion at larger sizes. Simple modifications in the flexibility and kinematics of their velarium appeared to be sufficient to alter their propulsive mode. Turning occurs during both bell contraction and expansion and is achieved by generating asymmetric vortex structures during both stages of the swimming cycle. Swimming characteristics were considered in conjunction with the unique foraging strategy used by cubomedusae.
    Description: This work was supported by an ONR MURI award (N000140810654) and National Science Foundation grant OCE 0623508 to JHC, SPC, JOD. And the work was supported by the Roger Williams University Foundation to Promote Scholarship.
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  • 40
    Publication Date: 2022-05-25
    Description: This article is distributed under the terms of the Creative Commons Public Domain. The definitive version was published in PLoS ONE 8 (2013): e55273, doi:10.1371/journal.pone.0055273.
    Description: Georges Bank is a large, shallow feature separating the Gulf of Maine from the Atlantic Ocean. Previous studies demonstrated a strong tidal-mixing front during the warm season on the northern bank margin between thermally stratified water in the Gulf of Maine and mixed water on the bank. Tides transport warm water off the bank during flood tide and cool gulf water onto the bank during ebb tide. During 10 days in August 2009, we mapped frontal temperatures in five study areas along ~100 km of the bank margin. The seabed “frontal zone”, where temperature changed with frontal movment, experienced semidiurnal temperature maxima and minima. The tidal excursion of the frontal boundary between stratified and mixed water ranged 6 to 10 km. This “frontal boundary zone” was narrower than the frontal zone. Along transects perpendicular to the bank margin, seabed temperature change at individual sites ranged from 7.0°C in the frontal zone to 0.0°C in mixed bank water. At time series in frontal zone stations, changes during tidal cycles ranged from 1.2 to 6.1°C. The greatest rate of change (−2.48°C hr−1) occurred at mid-ebb. Geographic plots of seabed temperature change allowed the mapping of up to 8 subareas in each study area. The magnitude of temperature change in a subarea depended on its location in the frontal zone. Frontal movement had the greatest effect on seabed temperature in the 40 to 80 m depth interval. Subareas experiencing maximum temperature change in the frontal zone were not in the frontal boundary zone, but rather several km gulfward (off-bank) of the frontal boundary zone. These results provide a new ecological framework for examining the effect of tidally-driven temperature variability on the distribution, food resources, and reproductive success of benthic invertebrate and demersal fish species living in tidal front habitats.
    Description: This study was supported by salary funds from the regular annual salary budget from Northeast Fisheries Science Center (NEFSC) and United States Geological Survey Woods Hole Coastal and Marine Science Center (USGS WH C&MSC), respectively; ship time funds from the NEFSC annual budget for days-at-sea ship operations; equipment from the NEFSC and USGS WH C&MSC annual equipment budgets.
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  • 41
    Publication Date: 2022-05-25
    Description: © The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS ONE 8 (2013): e54443, doi:10.1371/journal.pone.0054443.
    Description: Species-range expansions are a predicted and realized consequence of global climate change. Climate warming and the poleward widening of the tropical belt have induced range shifts in a variety of marine and terrestrial species. Range expansions may have broad implications on native biota and ecosystem functioning as shifting species may perturb recipient communities. Larger symbiont-bearing foraminifera constitute ubiquitous and prominent components of shallow water ecosystems, and range shifts of these important protists are likely to trigger changes in ecosystem functioning. We have used historical and newly acquired occurrence records to compute current range shifts of Amphistegina spp., a larger symbiont-bearing foraminifera, along the eastern coastline of Africa and compare them to analogous range shifts currently observed in the Mediterranean Sea. The study provides new evidence that amphisteginid foraminifera are rapidly progressing southwestward, closely approaching Port Edward (South Africa) at 31°S. To project future species distributions, we applied a species distribution model (SDM) based on ecological niche constraints of current distribution ranges. Our model indicates that further warming is likely to cause a continued range extension, and predicts dispersal along nearly the entire southeastern coast of Africa. The average rates of amphisteginid range shift were computed between 8 and 2.7 km year−1, and are projected to lead to a total southward range expansion of 267 km, or 2.4° latitude, in the year 2100. Our results corroborate findings from the fossil record that some larger symbiont-bearing foraminifera cope well with rising water temperatures and are beneficiaries of global climate change.
    Description: This work was supported by grants from the German Science Foundation (DFG; www.dfg.de) to ML and SL (LA 884/10-1, LA 884/5-1).
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  • 42
    Publication Date: 2022-05-25
    Description: © The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS ONE 8 (2013): e56993, doi:10.1371/journal.pone.0056993.
    Description: The mxaF gene, coding for the large (α) subunit of methanol dehydrogenase, is highly conserved among distantly related methylotrophic species in the Alpha-, Beta- and Gammaproteobacteria. It is ubiquitous in methanotrophs, in contrast to other methanotroph-specific genes such as the pmoA and mmoX genes, which are absent in some methanotrophic proteobacterial genera. This study examined the potential for using the mxaF gene as a functional and phylogenetic marker for methanotrophs. mxaF and 16S rRNA gene phylogenies were constructed based on over 100 database sequences of known proteobacterial methanotrophs and other methylotrophs to assess their evolutionary histories. Topology tests revealed that mxaF and 16S rDNA genes of methanotrophs do not show congruent evolutionary histories, with incongruencies in methanotrophic taxa in the Methylococcaceae, Methylocystaceae, and Beijerinckiacea. However, known methanotrophs generally formed coherent clades based on mxaF gene sequences, allowing for phylogenetic discrimination of major taxa. This feature highlights the mxaF gene’s usefulness as a biomarker in studying the molecular diversity of proteobacterial methanotrophs in nature. To verify this, PCR-directed assays targeting this gene were used to detect novel methanotrophs from diverse environments including soil, peatland, hydrothermal vent mussel tissues, and methanotroph isolates. The placement of the majority of environmental mxaF gene sequences in distinct methanotroph-specific clades (Methylocystaceae and Methylococcaceae) detected in this study supports the use of mxaF as a biomarker for methanotrophic proteobacteria.
    Description: This work was supported in part by grants from the U.S. National Science Foundation Ecosystems Studies program (awards # DEB9708092 and DEB0089738).
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  • 43
    Publication Date: 2022-05-25
    Description: © The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS ONE 8 (2013): e61065, doi:10.1371/journal.pone.0061065.
    Description: Ocean acidification, characterized by elevated pCO2 and the associated decreases in seawater pH and calcium carbonate saturation state (Ω), has a variable impact on the growth and survival of marine invertebrates. Larval stages are thought to be particularly vulnerable to environmental stressors, and negative impacts of ocean acidification have been seen on fertilization as well as on embryonic, larval, and juvenile development and growth of bivalve molluscs. We investigated the effects of high CO2 exposure (resulting in pH = 7.39, Ωar = 0.74) on the larvae of the bay scallop Argopecten irradians from 12 h to 7 d old, including a switch from high CO2 to ambient CO2 conditions (pH = 7.93, Ωar = 2.26) after 3 d, to assess the possibility of persistent effects of early exposure. The survival of larvae in the high CO2 treatment was consistently lower than the survival of larvae in ambient conditions, and was already significantly lower at 1 d. Likewise, the shell length of larvae in the high CO2 treatment was significantly smaller than larvae in the ambient conditions throughout the experiment and by 7 d, was reduced by 11.5%. This study also demonstrates that the size effects of short-term exposure to high CO2 are still detectable after 7 d of larval development; the shells of larvae exposed to high CO2 for the first 3 d of development and subsequently exposed to ambient CO2 were not significantly different in size at 3 and 7 d than the shells of larvae exposed to high CO2 throughout the experiment.
    Description: This work was funded by a Woods Hole Oceanographic Institution Interdisciplinary Award to Mullineaux & McCorkle; and awards to Mullineaux & White, to McCorkle, and to Cohen & McCorkle through NOAA (National Oceanic and Admosphereic Administration) Sea Grant #NA10OAR4170083. White was funded through a National Defense Science and Engineering Graduate Fellowship through the American Society for Engineering Education.
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  • 44
    Publication Date: 2022-05-25
    Description: © The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS ONE 8 (2013): e76096, doi:10.1371/journal.pone.0076096.
    Description: DNA samples derived from vertebrate skin, bodily cavities and body fluids contain both host and microbial DNA; the latter often present as a minor component. Consequently, DNA sequencing of a microbiome sample frequently yields reads originating from the microbe(s) of interest, but with a vast excess of host genome-derived reads. In this study, we used a methyl-CpG binding domain (MBD) to separate methylated host DNA from microbial DNA based on differences in CpG methylation density. MBD fused to the Fc region of a human antibody (MBD-Fc) binds strongly to protein A paramagnetic beads, forming an effective one-step enrichment complex that was used to remove human or fish host DNA from bacterial and protistan DNA for subsequent sequencing and analysis. We report enrichment of DNA samples from human saliva, human blood, a mock malaria-infected blood sample and a black molly fish. When reads were mapped to reference genomes, sequence reads aligning to host genomes decreased 50-fold, while bacterial and Plasmodium DNA sequences reads increased 8–11.5-fold. The Shannon-Wiener diversity index was calculated for 149 bacterial species in saliva before and after enrichment. Unenriched saliva had an index of 4.72, while the enriched sample had an index of 4.80. The similarity of these indices demonstrates that bacterial species diversity and relative phylotype abundance remain conserved in enriched samples. Enrichment using the MBD-Fc method holds promise for targeted microbiome sequence analysis across a broad range of sample types.
    Description: LAZ and VS were funded by a Brown University Office of the Vice President of Research SEED grant (LAZ) entitled “Tracking disease spread through the wildlife trade: New techniques to identify infectious microbes in aquarium fishes.” SOO and MQ were funded by Wellcome Trust Sanger Institute grant numbers 098051 and 079355/Z/06/Z.
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  • 45
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2012. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 117 (2012): C12007, doi:10.1029/2012JC008340.
    Description: We present observations and simulations of large-scale velocity structures associated with turbulent boundary layer dynamics of a coastal ocean. Special purpose acoustic Doppler current profiler measurements revealed that such structures were frequently present, in spite of complex coastal environmental conditions. Large eddy simulation results are only consistent with these observations if the Langmuir circulation (LC) effect due to wave-current interaction is included in the model. Thus, model results indicate that the observed large-scale velocity structures are due to LC. Based on these simulations, we examine the shift of energetics and transport from a local regime for purely shear-driven turbulence to a nonlocal regime for turbulence with LC due to coherent large-scale motions that span the whole water column. Without LC, turbulent kinetic energy (TKE) dissipation rates approximately balance TKE shear production, consistent with solid wall boundary layer turbulence. This stands in contrast to the LC case for which the vertical TKE transport plays a dominant role in the TKE balance. Conditional averages argue that large-scale LC coherent velocity structures extract only a small fraction of energy from the wavefield but receive most of their energy input from the Eulerian shear. The analysis of scalar fields and Lagrangian particles demonstrates that the vertical transport is significantly enhanced with LC but that small-scale mixing may be reduced. In the presence of LC, vertical scalar fluxes may be up gradient, violating a common assumption in oceanic boundary layer turbulence parameterizations.
    Description: This work was supported by the U.S. National Science Foundation (Grant OCE-1130678). CBLAST-Low analysis was supported by the Office of Naval Research under grants N00014-03-1- 0681 and N00014-06-1-0178 to the Woods Hole Oceanographic Institution. Author T.K. received support from Faculty Startup Funds of the School of Marine Science and Policy, University of Delaware.
    Description: 2013-06-11
    Keywords: Langmuir circulation ; Boundary layer dynamics ; Coastal transport ; Large eddy simulation
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  • 46
    Publication Date: 2022-05-25
    Description: © The Author(s), 2012. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS One 7 (2012): e50215, doi:10.1371/journal.pone.0050215.
    Description: The cosmopolitan solitary deep-water scleractinian coral Desmophyllum dianthus (Esper, 1794) was selected as a representative model species of the polyphyletic Caryophylliidae family to (1) examine phylogenetic relationships with respect to the principal Scleractinia taxa, (2) check population structure, (3) test the widespread connectivity hypothesis and (4) assess the utility of different nuclear and mitochondrial markers currently in use. To carry out these goals, DNA sequence data from nuclear (ITS and 28S) and mitochondrial (16S and COI) markers were analyzed for several coral species and for Mediterranean populations of D. dianthus. Three phylogenetic methodologies (ML, MP and BI), based on data from the four molecular markers, all supported D. dianthus as clearly belonging to the “robust” clade, in which the species Lophelia pertusa and D. dianthus not only grouped together, but also shared haplotypes for some DNA markers. Molecular results also showed shared haplotypes among D. dianthus populations distributed in regions separated by several thousands of kilometers and by clear geographic barriers. These results could reflect limited molecular and morphological taxonomic resolution rather than real widespread connectivity. Additional studies are needed in order to find molecular markers and morphological features able to disentangle the complex phylogenetic relationship in the Order Scleractinia and to differentiate isolated populations, thus avoiding the homoplasy found in some morphological characters that are still considered in the literature.
    Description: This study was funded by CTM2009-00496 and CGL2011-23306 projects of the “Ministerio de Ciencia e Innovación” (Spain). Research at sea was partly supported by the European Commission F. P.VI Project HERMES Contract No. GOCE-CT-2005-511234-1) and the EU F.P. VII Project HERMIONE(contract number no. 226354).
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  • 47
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 1997. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 102, no. B7 (1997): 15447–15462, doi:10.1029/97JB00723.
    Description: The results of a multiscale spectral analysis of bathymetric data on the flank of the Mid-Atlantic Ridge are described. Data were collected during two cruises using Hydrosweep multibeam (tens of kilometers to ∼0.2 km scale range) and Mesotech scanning pencil-beam sonar attached to remotely operated vehicle Jason (∼1 km to ∼0.5 m scale range). These data are augmented by visual data which enabled us to identify bathymetric profiles which are over unsedimented or thinly sedimented crust. Our analysis, therefore, is focused primarily on statistical characterization of basement morphology. Work is concentrated at two sites: site B on ∼24 Ma crust in an outside-corner setting, and site D on ∼3 Ma crust in an inside-corner setting. At site B we find that an anisotropic, band-limited fractal model (i.e., the “von Kármán” model proposed for abyssal hill morphology by Goff and Jordan [1988]) is not sufficient to describe the full range of scales observed in this study. Our observations differ from this model in two ways: (1) strike and cross-strike (dip) spectral properties converge for wavelengths smaller than ∼300 m, and (2) in both strike and dip directions the fractal dimension changes at ∼10 m wavelength, from ∼1.27 at larger scales to ∼1.0 at smaller scales. The convergence of strike and dip spectral properties appears to be associated with destruction of ridge-parallel fault scarps by mass wasting, which develops canyon-like incisions that cross scarps at high angles. The change in fractal dimension at ∼10 m scale appears to be related to a minimum spacing of significant slope breaks associated with scarps which are created by faulting and mass wasting. At site D, although there is no significant abyssal hill anisotropy, the spectral properties at all scales are consistent with the von Kármán model. The fractal dimension at this site (∼1.15) is less than at site B. This difference may be reflect different morphology related to crustal formation at inside-corner versus outside-corner position or, more likely, differences in the degree of mass wasting. The smoothing of seafloor morphology by sediments is evident in Hydrosweep periodograms where, relative to basement roughness, spectral power decreases progressively with decreasing wavelength.
    Description: This work was supported under ONR grants N00014-94-1-0197 and N00014-96-1-0462 (J.A.G.) and N00014-90-J-1621 and N00014-94-1-0466 (B.E.T.).
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  • 48
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2012. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Paleoceanography 27 (2012): PA3227, doi:10.1029/2012PA002335.
    Description: The rate of uranium accumulation in oceanic sediments from seawater is controlled by bottom water oxygen concentrations and organic carbon fluxes—two parameters that are linked to deep ocean storage of CO2. To investigate glacial-interglacial changes in what is known as authigenic U, we have developed a rapid method for its determination as a simple addition to a procedure for foraminiferal trace element analysis. Foraminiferal calcite acts as a low U substrate (U/Ca 〈 15 nmol/mol) upon which authigenic U accumulates in reducing sediments. We measured a downcore record of foraminiferal U/Ca from ODP Site 1090 in the South Atlantic and found that U/Ca ratios increase by 70–320 nmol/mol during glacial intervals. There is a significant correlation between U/Ca records of benthic and planktonic foraminiferal species and between U/Ca and bulk sediment authigenic U. These results indicate that elevated U/Ca ratios are attributable to the accumulation of authigenic U coatings in sediments. Foraminiferal Mn/Ca ratios were lower during the glacial intervals, suggesting that the observed U accumulation on the shells is not directly linked to U incorporation into secondary manganese phases. Thus, foraminiferal U/Ca ratios may provide useful information on past changes in sediment redox conditions.
    Description: R.B. was funded by the Winston Churchill Foundation, and H.E. was funded by the UK Natural Environment Research Council and the European Research Council.
    Description: 2013-03-08
    Keywords: South Atlantic ; U/Ca ; Authigenic uranium ; Foraminifera ; Glacial cycles ; Redox paleo-proxy
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  • 49
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2003. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geochemistry Geophysics Geosystems 4 (2003): 1024, doi:10.1029/2002GC000364.
    Description: The Mid-Atlantic Ridge around the Fifteen-Twenty Fracture Zone is unique in that outcrops of lower crust and mantle rocks are extensive on both flanks of the axial valley walls over an unusually long distance along-axis, indicating a high ratio of tectonic to magmatic extension. On the basis of newly collected multibeam bathymetry, magnetic, and gravity data, we investigate crustal evolution of this unique section of the Mid-Atlantic Ridge over the last 5 Ma. The northern and southern edges of the study area, away from the fracture zone, contain long abyssal hills with small spacing and fault throw, well lineated and high-amplitude magnetic signals, and residual mantle Bouguer anomaly (RMBA) lows, all of which suggest relatively robust magmatic extension. In contrast, crust in two ridge segments immediately north of the fracture zone and two immediately to the south is characterized by rugged and blocky topography, by low-amplitude and discontinuous magnetization stripes, and by RMBA highs that imply thin crust throughout the last 5 Ma. Over these segments, morphology is typically asymmetric across the spreading axis, indicating significant tectonic thinning of crust caused by faults that have persistently dipped in only one direction. North of the fracture zone, however, megamullions are that thought to have formed by slip on long-lived normal faults are found on both ridge flanks at different ages and within the same spreading segment. This unusual partitioning of megamullions can be explained either by a ridge jump or by polarity reversal of the detachment fault following formation of the first megamullion.
    Description: This work was completed while T. Fujiwara was a Guest Investigator at Woods Hole Oceanographic Institution with funding from Japan Marine Science and Technology Center (JAMSTEC), National Science Foundation, and the JAMSTEC Research Overseas Program. J. Lin’s contributions to this research were supported by NSF Grant OCE-9811924. B. E. Tucholke’s contributions were supported by NSF Grant OCE-9503561 and by the Andrew W. Mellon Endowment Fund for Innovative Research and the Henry Bryant Bigelow Chair at Woods Hole Oceanographic Institution.
    Keywords: Fifteen-twenty fracture zone ; Morphology ; Magnetic anomaly ; Gravity anomaly ; Megamullion
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  • 50
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 1998. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 103, No. B8 (1998): 17807–17826, doi:10.1029/98JB01394.
    Description: A sea-surface magnetic survey over the west flank of the Mid-Atlantic Ridge from 0 to 29 Ma crust encompasses several spreading segments and documents the evolution of crustal magnetization in slowly accreted crust. We find that magnetization decays rapidly within the first few million years, although the filtering effect of water depth on the sea-surface data and the slow spreading rate (〈13 km/m.y.) preclude us from resolving this decay rate. A distinctly asymmetric, along-axis pattern of crustal magnetization is rapidly attenuated off-axis, suggesting that magnetization dominated by extrusive lavas on-axis is reduced off-axis to a background value. Off-axis, we find a statistically significant correlation between crustal magnetization and apparent crustal thickness with thin crust tending to be more positively magnetized than thicker crust, indicative of induced magnetization in thin inside corner (IC) crust. In general, we find that off-axis segment ends show an induced magnetization component regardless of polarity and that IC segment ends tend to have slightly more induced component compared with outside corner (OC) segment ends, possibly due to serpentinized uppermost mantle at IC ends. We find that remanent magnetization is also reduced at segment ends, but there is no correlation with inside or outside corner crust, even though they have very different crustal thicknesses. This indicates that remanent magnetization off-axis is independent of crustal thickness, bulk composition, and the presence or absence of extrusives. Remanence reduction at segment ends is thought to be primarily due to alteration of lower crust in OC crust and a combination of crustal thinning and alteration in IC crust. From all these observations, we infer that the remanent magnetization of extrusive crust is strongly attenuated off-axis, and that magnetization of the lower crust may be the dominant source for off-axis magnetic anomalies.
    Description: M. Tivey was supported by ONR grant N00014-94-1-0467 and NSF grant OCE-9200905 and B. Tucholke was supported by ONR grant N00014-94-1-0466 and NSF grant OCE-9503561. Data were collected under ONR grant N00014-90-JI612.
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  • 51
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 1995. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 100, no. B11 (1995): 22509–22522, doi:10.1029/95JB02510.
    Description: A recent cruise to the Office of Naval Research Atlantic Natural Laboratory obtained ∼100% Hydrosweep bathymetrie coverage, 〉200% Hawaii MRl (HMRl) side scan coverage, gravity and magnetics over an area spanning three ridge segments along axis (∼25°25′N to ∼27°10′N), and crustal ages from 0 to 26–30 Ma (∼400 km) on the west flank of the Mid-Atlantic Ridge. This data set represents a first opportunity for an extensive regional analysis of abyssal hill morphology created at a slow spreading ridge. The primary purpose of this work is to investigate the relationship between abyssal hill morphology and the properties of the ridge crest at which they were formed. We apply the method of Goff and Jordan [1988] for the estimation of two-dimensional statistical properties of abyssal hill morphology from the gridded Hydrosweep bathymetry. Important abyssal hill parameters derived from this analysis include root-mean-square (rms) height, characteristic width, and plan view aspect ratio. The analysis is partitioned into two substudies: (1) analysis of near-axis (〈 7 Ma) abyssal hills for each of the three segments and (2) analysis of temporal variations (∼2–29 Ma) in abyssal hill morphology along the run of the south segment. The results of this analysis are compared and correlated with analysis of the gravity data and preliminary determination of faulting characteristics based on HMRl side scan data. Principal results of this study are: (1) Abyssal hill morphology within the study region is strongly influenced by the inside-outside corner geometry of the mid-ocean ridge segments; abyssal hills originating at inside corners have larger rms height and characteristic width and smaller plan view aspect ratio than those originating at outside corners. (2) The residual mantle Bouguer gravity anomaly is positively correlated with intersegment and along-flow-line variations in rms height and characteristic width, and it is negatively correlated with plan view aspect ratio. From this result, we infer that lower-relief, narrower, and more elongated abyssal hills are produced when the crust being generated is thicker. (3) Intersegment variations in near-axis rms height negatively correlate with average fault density as determined from analysis of HMRl side scan imagery.
    Description: This research was supported by the Office of Naval Research under grants N00014-92-J-1214, N00014-94-I-0197, N0014-90-J-1621, and N0014-94-1-0466. G.E.J. was supported by ONR AASERT grant N00014-93-I-1153, and additional support to J.L. was provided by NSF grant OCE93-00708.
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  • 52
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 1981. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 86, no. B5 (1981): 3791–3806, doi:10.1029/JB086iB05p03791.
    Description: The Agulhas Plateau lies 500 km off the Cape of Good Hope in the southwestern Indian Ocean. Acoustic basement beneath the northern one third of this large, aseismic structural high has rugged morphology, but basement in the south is anomalously smooth, excepting a 30- to 90-km-wide zone with irregular relief that trends south-southwest through the center of the plateau. Seismic refraction profiles across the southern plateau indicate that the zone of irregular acoustic basement overlies thickened oceanic crust and that continental crust, locally thinned and intruded by basalts, underlies several regions of smooth acoustic basement. Recovery of quartzo-feldspathic gneisses in dredge hauls confirms the presence of continental crust. The smoothness of acoustic basement probably results from erosion (perhaps initially subaerial) of topographic highs with redeposition and cementation of debris in ponds to form high-velocity beds. Basalt flows and sills also may contribute locally to form smooth basement. The rugged basement of the northern plateau appears to be of oceanic origin. A plate reconstruction to the time of initial opening of the South Atlantic places the continental part of the southern plateau adjacent to the southern edge of the Falkland Plateau, and both abut the western Mozambique Ridge. Both the Agulhas and Falkland plateaus were displaced westward during initial rifting in the Early Cretaceous. Formation of an RRR triple junction at the northern edge of the Agulhas continental fragment during middle Cretaceous time may explain the origin of the rugged, thickened oceanic crust beneath the northern plateau as well as the apparent extension of the continental crust and intrusion of basaltic magmas beneath the southern plateau.
    Description: Our field program (R/V Vema cruise 34-11) and subsequent analyses were supported by NSF grant OCE76-21782 to Lamont-Doherty Geological Observatory. Many aspects of this work benefitted from use of existing seismic and other geophysical data acquired with the support of ONR contract N00014-75C-0210 and National Science Foundation grants GA-27281 and OCE-76-18049.
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  • 53
    Publication Date: 2022-05-25
    Description: © The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS ONE 8 (2013): e53889, doi:10.1371/journal.pone.0053889.
    Description: Thecosome pteropods (Mollusca, Gastropoda) are an ecologically important, diverse, and ubiquitous group of holoplanktonic animals that are the focus of intense research interest due to their external aragonite shell and vulnerability to ocean acidification. Characterizing the response of these animals to low pH and other environmental stressors has been hampered by continued uncertainty in their taxonomic identification. An example of this confusion in species assignment is found in the genus Diacavolinia. All members of this genus were originally indentified as a single species, Cavolinia longirostris, but over the past fifty years the taxonomy has been revisited multiple times; currently the genus comprises 22 different species. This study examines five species of Diacavolinia, including four sampled in the Northeast Atlantic (78 individuals) and one from the Eastern tropical North Pacific (15 individuals). Diacavolina were identified to species based on morphological characteristics according to the current taxonomy, photographed, and then used to determine the sequence of the “DNA barcoding” region of the cytochrome c oxidase subunit I (COI). Specimens from the Atlantic, despite distinct differences in shell morphology, showed polyphyly and a genetic divergence of 〈3% (K2P distance) whereas the Pacific and Atlantic samples were more distant (~19%). Comparisons of Diacavolinia spp. with other Cavolinia spp. reveal larger distances (~24%). These results indicate that specimens from the Atlantic comprise a single monophyletic species and suggest possible species-level divergence between Atlantic and Pacific populations. The findings support the maintenance of Diacavolinia as a separate genus, yet emphasize the inadequacy of our current taxonomic understanding of pteropods. They highlight the need for accurate species identifications to support estimates of biodiversity, range extent and natural exposure of these planktonic calcifiers to environmental variability; furthermore, the apparent variation of the pteropods shell may have implications for our understanding of the species’ sensitivity to ocean acidification.
    Description: This material is based upon work supported by the National Science Foundation under Grant Number OCE-0928801. AEM was funded through the WHOI Postdoctoral Scholarship. Support to LBB was provided by the College of Liberal Arts & Sciences, University of Connecticut; and by the Census of Marine Life/Alfred P. Sloan Foundation.
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  • 54
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2012. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 39 (2012): L24302, doi:10.1029/2012GL053892.
    Description: Subducted seamounts have been linked to interplate earthquakes, but their specific effects on earthquake mechanism remain controversial. A key question is under what conditions a subducted seamount will generate or stop megathrust earthquakes. Here we show results from numerical experiments in the framework of rate- and state-dependent friction law in which a seamount is characterized as a patch of elevated effective normal stress on the thrust interface. We find that whether subducted seamounts generate or impede megathrust earthquakes depends critically on their relative locations to the earthquake nucleation zone defined by depth-variable friction parameters. A seamount may act as a rupture barrier and such barrier effect is most prominent when the seamount sits at an intermediate range of the seamount-to-trench distances (20–100% of the nucleation-zone-to-trench distance). Moreover, we observe that seamount-induced barriers can turn into asperities on which megathrust earthquakes can nucleate at shallow depths and rupture the entire seismogenic zone. These results suggest that a strong barrier patch may not necessarily reduce the maximum size of earthquakes. Instead, the barrier could experience large coseismic slip when it is ruptured.
    Description: This work is supported by the NSF Grant EAR-1015221 and WHOI Deep Ocean Exploration Institute awards 27071150 and 25051162.
    Description: 2013-06-19
    Keywords: Barrier ; Megathrust earthquake ; Rupture propagation ; Seamount
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  • 55
    Publication Date: 2022-05-25
    Description: © The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS ONE 8 (2013): e63714, doi:10.1371/journal.pone.0063714.
    Description: Anthropogenic carbon dioxide (CO2) is being absorbed into the ocean, altering seawater chemistry, with potentially negative impacts on a wide range of marine organisms. The early life stages of invertebrates with internal and external aragonite structures may be particularly vulnerable to this ocean acidification. Impacts to cephalopods, which form aragonite cuttlebones and statoliths, are of concern because of the central role they play in many ocean ecosystems and because of their importance to global fisheries. Atlantic longfin squid (Doryteuthis pealeii), an ecologically and economically valuable taxon, were reared from eggs to hatchlings (paralarvae) under ambient and elevated CO2 concentrations in replicated experimental trials. Animals raised under elevated pCO2 demonstrated significant developmental changes including increased time to hatching and shorter mantle lengths, although differences were small. Aragonite statoliths, critical for balance and detecting movement, had significantly reduced surface area and were abnormally shaped with increased porosity and altered crystal structure in elevated pCO2-reared paralarvae. These developmental and physiological effects could alter squid paralarvae behavior and survival in the wild, directly and indirectly impacting marine food webs and commercial fisheries.
    Description: This study was supported by a WHOI Student Summer Fellowship and WHOI-MIT Joint Program, the Penzance Endowed Fund, the John E. and Anne W. Sawyer Endowed Fund and NSF Research Grant No. EF-1220034. Additional support came from NSF OCE 1041106 to ALC and DCM, and NOAA Sea Grant award #NA10OAR4170083 to ALC and DCM.
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  • 56
    Publication Date: 2022-05-25
    Description: © The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS ONE 8 (2013): e79574, doi:10.1371/journal.pone.0079574.
    Description: Transcription factors in the CNC-bZIP family (NFE2, NRF1, NRF2 and NRF3) regulate genes with a wide range of functions in response to both physiological and exogenous signals, including those indicating changes in cellular redox status. Given their role in helping to maintain cellular homeostasis, it is imperative to understand the expression, regulation, and function of CNC-bZIP genes during embryonic development. We explored the expression and function of six nrf genes (nfe2, nrf1a, nrf1b, nrf2a, nrf2b, and nrf3) using zebrafish embryos as a model system. Analysis by microarray and quantitative RT-PCR showed that genes in the nrf family were expressed throughout development from oocytes to larvae. The spatial expression of nrf3 suggested a role in regulating the development of the brain, brachia and pectoral fins. Knock-down by morpholino anti-sense oligonucleotides suggested that none of the genes were necessary for embryonic viability, but nfe2 was required for proper cellular organization in the pneumatic duct and subsequent swim bladder function, as well as for proper formation of the otic vesicles. nrf genes were induced by the oxidant tert-butylhydroperoxide, and some of this response was regulated through family members Nrf2a and Nrf2b. Our results provide a foundation for understanding the role of nrf genes in normal development and in regulating the response to oxidative stress in vertebrate embryos.
    Description: This work was supported, in whole or in part, by National Institutes of Health grants F32ES019832 (to L.M.W.), F32ES017585 (to A.R.T.-L.), R01ES015912 (to J.J.S.), and R01ES016366 (to M.E.H.). This work was also supported by Walter A. and Hope Noyes Smith and the J. Seward Johnson Fund.
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  • 57
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2012. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 117 (2012): C12022, doi:10.1029/2012JC008369.
    Description: Horizontal velocity, temperature and salinity measurements from the Line W array for the period 2004–2008 show large changes in the water mass structure and circulation of the Deep Western Boundary Current (DWBC). Fluctuations in the flow with periods from 10 to 60 days are bottom intensified: signals most likely associated with topographic Rossby waves (TRW). A fraction (∼15%) of the DWBC transport variability is caused by Gulf Stream rings and meanders. These flow anomalies are surface intensified and fluctuate at frequencies lower than the TRW. Interannual variability in the velocity field appears to be related to changes in the hydrographic properties. The dominant mode of variability is characterized by an overall freshening, cooling, a potential vorticity (PV) increase in the deep Labrador Sea Water (dLSW) and a PV decrease in the Overflow Water (OW). The variability in the flow associated with these property changes is not spatially homogeneous. Offshore (water depths larger than 3500 m) changes in the velocity are in phase with PV changes in the OW: a decrease in the OW PV is accompanied by an increase in the southward (negative) transport. Conversely, variations of the inshore flow are in phase with changes in the dLSW PV (increasing PV and decreasing transport). This trend, true for most of the record, reverses after the winter of 2007–2008. A sudden decrease of the dLSW PV is observed, with a corresponding intensification of the flow in the inner DWBC as well as a northward shift in the Gulf Stream axis.
    Description: Financial support for the Line W program (2004–2008) was provided by the U.S. National Science Foundation (grants OCE-0241354 and OCE-0726720) as well as funding from the WHOI’s Ocean and Climate Change Institute.
    Description: 2013-06-22
    Keywords: DWBC ; Gulf Stream ; Line W ; Transport ; Variability ; Water mass
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  • 58
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2012. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 39 (2012): L24604, doi:10.1029/2012GL054034.
    Description: Eddies and vortices associated with breaking waves rapidly disperse pollution, nutrients, and terrestrial material along the coast. Although theory and numerical models suggest that vorticity is generated near the ends of a breaking wave crest, this hypothesis has not been tested in the field. Here we report the first observations of wave-generated vertical vorticity (e.g., horizontal eddies), and find that individual short-crested breaking waves generate significant vorticity [O(0.01 s−1)] in the surfzone. Left- and right-handed wave ends generate vorticity of opposite sign, consistent with theory. In contrast to theory, the observed vorticity also increases inside the breaking crest, possibly owing to onshore advection of vorticity generated at previous stages of breaking or from the shape of the breaking region. Short-crested breaking transferred energy from incident waves to lower frequency rotational motions that are a primary mechanism for dispersion near the shoreline.
    Description: Funding was provided by a National Security Science and Engineering Faculty Fellowship, the Office of Naval Research, and a Woods Hole Oceanographic Institution Postdoctoral Fellowship.
    Description: 2013-06-21
    Keywords: Mixing ; Nearshore ; Turbulence ; Vorticity ; Waves
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  • 59
    Publication Date: 2022-05-25
    Description: © The Author(s), 2012. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS One 7 (2012): e49474, doi:10.1371/journal.pone.0049474.
    Description: Patterns of genetic connectivity are increasingly considered in the design of marine protected areas (MPAs) in both shallow and deep water. In the New Zealand Exclusive Economic Zone (EEZ), deep-sea communities at upper bathyal depths (〈2000 m) are vulnerable to anthropogenic disturbance from fishing and potential mining operations. Currently, patterns of genetic connectivity among deep-sea populations throughout New Zealand’s EEZ are not well understood. Using the mitochondrial Cytochrome Oxidase I and 16S rRNA genes as genetic markers, this study aimed to elucidate patterns of genetic connectivity among populations of two common benthic invertebrates with contrasting life history strategies. Populations of the squat lobster Munida gracilis and the polychaete Hyalinoecia longibranchiata were sampled from continental slope, seamount, and offshore rise habitats on the Chatham Rise, Hikurangi Margin, and Challenger Plateau. For the polychaete, significant population structure was detected among distinct populations on the Chatham Rise, the Hikurangi Margin, and the Challenger Plateau. Significant genetic differences existed between slope and seamount populations on the Hikurangi Margin, as did evidence of population differentiation between the northeast and southwest parts of the Chatham Rise. In contrast, no significant population structure was detected across the study area for the squat lobster. Patterns of genetic connectivity in Hyalinoecia longibranchiata are likely influenced by a number of factors including current regimes that operate on varying spatial and temporal scales to produce potential barriers to dispersal. The striking difference in population structure between species can be attributed to differences in life history strategies. The results of this study are discussed in the context of existing conservation areas that are intended to manage anthropogenic threats to deep-sea benthic communities in the New Zealand region.
    Description: This work was funded in part by a Fulbright Fellowship administered by Fulbright New Zealand and the U.S. Department of State, awarded in 2011 to EKB. Funding and support for research expedition was provided by Land Information New Zealand, New Zealand Ministry of Fisheries, NIWA, Census of Marine Life on Seamounts (CenSeam), and the Foundation for Research, Science and Technology. Other research funding was provided by the New Zealand Ministry of Science and Innovation project “Impacts of resource use on vulnerable deep-sea communities” (FRST contract CO1X0906), the National Science Foundation (OCE-0647612), and the Deep Ocean Exploration Institute (Fellowship support to TMS).
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  • 60
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 1991. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Eos 72, no. 25 (1991): 268-270, doi:10.1029/90EO00214.
    Description: Long-term Natural Laboratories for in-depth studies of the seafloor at both a slowspreading (〈30 mm/yr) and a fast-spreading (〉60 mm/yr) mid-ocean ridge are being established by the Office of Naval Research. The two Natural Laboratories were selected for their representativeness of global mid-ocean ridge environments, and for their logistic accessibility. The Natural Laboratory region for the slow-spreading regime is on the Mid-Atlantic Ridge from Kane Fracture Zone north to about 27°30″N (Figure 1), and the fast-spreading counterpart is on the East Pacific Rise at about 8°–10°30″N, from Siqueiros to Clipperton Fracture Zone (Figure 2). Together, the two Natural Laboratories include most significant geologic variables that are thought to control both the shape and structure of the igneous crust and the scatter of acoustic wavefields from the bottom/subbottom (BSB) at low angles of incidence.
    Description: This work has been supported by the Office of Naval Research, Codes 11250A and 1125GG, and by National Science Foundation grant OCE 8716713.
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  • 61
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2001. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 106, no. B8 (2001): 16145–16161, doi:10.1029/2001JB000373.
    Description: Recently discovered megamullions on the seafloor have been interpreted to be the exhumed footwalls of long-lived detachment faults operating near the ends of spreading segments in slow spreading crust. We conducted five submersible dives on one of these features just east of the rift valley in the Mid-Atlantic Ridge at 26°35′N and obtained visual, rock sample, gravity, and heat flow data along a transect from the breakaway zone (where the fault is interpreted to have first nucleated in ∼2.0–2.2 Ma crust) westward to near the termination (∼0.7 Ma). Our observations are consistent with the detachment fault hypothesis and show the following features. In the breakaway zone, faulted and steeply backtilted basaltic blocks suggest rotation above a deeper shear zone; the youngest normal faults in this sequence are interpreted to have evolved into the long-lived detachment fault. In younger crust the interpreted detachment surface rises as monotonously flat seafloor in a pair of broad, gently sloping domes that formed simultaneously along isochrons and are now thinly covered by sediment. The detachment surface is locally littered with basaltic debris that may have been clipped from the hanging wall. The domes coincide with a gravity high that continues along isochrons within the spreading segment. Modeling of on-bottom gravity measurements and recovery of serpentinites imply that mantle rises steeply and is exposed within ∼7 km west of the breakaway but that rocks with intermediate densities prevail farther west. Within ∼5 km of the termination, small volcanic cones appear on the detachment surface, indicating melt input into the footwall. We interpret the megamullion to have developed during a phase of limited magmatism in the spreading segment, with mantle being exhumed by the detachment fault 〈0.5 m.y. after its initiation. Increasing magmatism may eventually have weakened the lithosphere and facilitated propagation of a rift that terminated slip on the detachment fault progressively between ∼1.3 m.y. and 0.7 m.y. Identifiable but low-amplitude magnetic anomalies over the megamullion indicate that it incorporates a magmatic component. We infer that much of the footwall is composed of variably serpentinized peridotite intruded by plutons and dikes.
    Description: B. Tucholke's research was supported by NSF grant OCE-9503561 and by an award from the Andrew W. Mellon Foundation Endowed Fund for Innovative Research and the Henry Bryant Bigelow Chair in Oceanography at Woods Hole Oceanographic Institution. G. Hirth acknowledges support by NSF grant OCE-9907244.
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  • 62
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 1998. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 103, no. B5 (1998): 9857–9866, doi:10.1029/98JB00167.
    Description: In a study of geological and geophysical data from the Mid-Atlantic Ridge, we have identified 17 large, domed edifices (megamullions) that have surfaces corrugated by distinctive mullion structure and that are developed within inside-corner tectonic settings at ends of spreading segments. The edifices have elevated residual gravity anomalies, and limited sampling has recovered gabbros and serpentinites, suggesting that they expose extensive cross sections of the oceanic crust and upper mantle. Oceanic megamullions are comparable to continental metamorphic core complexes in scale and structure, and they may originate by similar processes. The megamullions are interpreted to be rotated footwall blocks of low-angle detachment faults, and they provide the best evidence to date for the common development and longevity (∼1–2 m.y.) of such faults in ocean crust. Prolonged slip on a detachment fault probably occurs when a spreading segment experiences a lengthy phase of relatively amagmatic extension. During these periods it is easier to maintain slip on an existing fault at the segment end than it is to break a new fault in the strong rift-valley lithosphere; slip on the detachment fault probably is facilitated by fault weakening related to deep lithospheric changes in deformation mechanism and mantle serpentinization. At the segment center, minor, episodic magmatism may continue to weaken the axial lithosphere and thus sustain inward jumping of faults. A detachment fault will be terminated when magmatism becomes robust enough to reach the segment end, weaken the axial lithosphere, and promote inward fault jumps there. This mechanism may be generally important in controlling the longevity of normal faults at segment ends and thus in accounting for variable and intermittent development of inside-corner highs.
    Description: The data acquisition and research were supported by NSF grants OCE-8716713, OCE-9313986, and OCE-9503561 and by ONR grant N00014-90-J-1621.
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  • 63
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 1982. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 87, no. B11 (1982): 9389–9407, doi:10.1029/JB087iB11p09389.
    Description: The J Anomaly Ridge is a structural ridge or step in oceanic basement that extends southwest from the eastern end of the Grand Banks. It lies beneath the J magnetic anomaly at the young end (M-4 to M-0) of the M series magnetic anomalies. Its structural counterpart beneath the J anomaly in the eastern Atlantic is the Madeira-Tore Rise, but this feature has been overprinted by post-middle Cretaceous deformation and volcanism. In order to study the origin and evolution of the J Anomaly Ridge-Madeira-Tore Rise system, we obtained seismic refraction and multichannel reflection profiles across the J Anomaly Ridge near 39°N latitude. The western ridge flank consists of a series of crustal blocks downdropped along west-dipping normal faults, but the eastern slope to younger crust is gentle and relatively unfaulted. The western flank also is subparallel to seafloor isochrons, becoming younger to the south. Anomalously smooth basement caps the ridge crest, and it locally exhibits internal, eastward-dipping reflectors similar in configuration to those within subaerially emplaced basalt flows on Iceland. When isostatically corrected for sediment load, the northern part of the J Anomaly Ridge has basement depths about 1400 m shallower than in our study area, and deep sea drilling has shown that the northern ridge was subaerially exposed during the middle Cretaceous. We suggest that most of the system originated under subaerial conditions at the time of late-stage rifting between the adjacent Grand Banks and Iberia. The excess magma required to form the ridge may have been vented from a mantle plume beneath the Grand Banks-Iberia rift zone and channelled southward beneath the rift axis of the abutting Mid-Atlantic Ridge. Resulting edifice-building volcanism constructed the ridge system between anomalies M-4 and M-0, moving southward along the ridge axis at about 50 mm/yr. About M-0 time, when true drift began between Iberia and the Grand Banks, this southward venting rapidly declined. The results were rapid return of the spreading axis to normal elevations, division of the ridge system into the separate J Anomaly Ridge and Madeira-Tore Rise, and unusually fast subsidence of at least parts of these ridges to depths that presently are near normal. This proposed origin and evolutionary sequence for the J Anomaly Ridge-Madeira-Tore Rise system closely matches events of uplift and unconformity development on the adjacent Grand Banks.
    Description: This research was supported by the Office of Naval Research, contracts N00014-75-C-0210 and N00014-80-C-0098 to Lamont-Doherty Geological Observatory and contract N00014-79-C-0071 to Woods Hole Oceanographic Institution.
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  • 64
    Publication Date: 2022-05-25
    Description: © The Author(s), 2012. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Public Library of Science, doi:10.1371/journal.pone.0052072.
    Description: The low-frequency, powerful vocalizations of blue and fin whales may potentially be detected by conspecifics across entire ocean basins. In contrast, humpback and bowhead whales produce equally powerful, but more complex broadband vocalizations composed of higher frequencies that suffer from higher attenuation. Here we evaluate the active space of high frequency song notes of bowhead whales (Balaena mysticetus) in Western Greenland using measurements of song source levels and ambient noise. Four independent, GPS-synchronized hydrophones were deployed through holes in the ice to localize vocalizing bowhead whales, estimate source levels and measure ambient noise. The song had a mean apparent source level of 185±2 dB rms re 1 µPa @ 1 m and a high mean centroid frequency of 444±48 Hz. Using measured ambient noise levels in the area and Arctic sound spreading models, the estimated active space of these song notes is between 40 and 130 km, an order of magnitude smaller than the estimated active space of low frequency blue and fin whale songs produced at similar source levels and for similar noise conditions. We propose that bowhead whales spatially compensate for their smaller communication range through mating aggregations that co-evolved with broadband song to form a complex and dynamic acoustically mediated sexual display.
    Description: This work was funded by the Oticon Foundation (grant # 08-3469 to Arctic Station, OT). OT and MC were additionally funded by AP Møller og Hustru Chastine Mc-Kinney Møllers Fond til almene Formaal, MS by a PhD scholarship from the Oticon Foundation, FHJ by a Danish Council for Independent Research, Natural Sciences post-doctoral grant, SEP by a grant from the U.S. Office of Naval Research, and PTM by frame grants from the Danish Natural Science Research Council.
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  • 65
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 1997. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 102, no. B5 (1997): 10203–10223, doi:10.1029/96JB03896.
    Description: We conducted a detailed geological-geophysical survey of the west flank of the Mid-Atlantic Ridge between 25°25′N and 27°10′N and from the ridge axis out to 29 Ma crust, acquiring Hydrosweep multibeam bathymetry, HAWAII MR1 sidescan-sonar imagery, gravity, magnetics, and single-channel seismic reflection profiles. The survey covered all or part of nine spreading segments bounded by mostly nontransform, right-stepping discontinuities which are subparallel to flow lines but which migrated independently of one another. Some discontinuities alternated between small right- and left-stepping offsets or exhibited zero offset for up to 3–4 m.y. Despite these changes, the spreading segments have been long-lived and extend 20 m.y. or more across isochrons. A large shift (∼9°) in relative plate motion about 24–22 Ma caused significant changes in segmentation pattern. The nature of this plate-boundary response, together with the persistence of segments through periods of zero offset at their bounding discontinuities, suggest that the position and longevity of segments are controlled primarily by the subaxial position of buoyant mantle diapirs or focused zones of rising melt. Within segments, there are distinct differences in seafloor depth, morphology, residual mantle Bouguer gravity anomaly, and apparent crustal thickness between inside-corner and outside-corner crust. This demands fundamentally asymmetric crustal accretion and extension across the ridge axis, which we attribute to low-angle, detachment faulting near segment ends. Cyclic variations in residual gravity over the crossisochron run of segments also suggest crustal-thickness changes of at least 1–2 km every 2–3 m.y. These are interpreted to be caused by episodes of magmatic versus relatively amagmatic extension, controlled by retention and quasiperiodic release of melt from the upwelling mantle. Detachment faulting appears to be especially effective in exhuming lower crust to upper mantle at inside corners during relatively amagmatic episodes, creating crustal domes analogous to “turtleback” metamorphic core complexes that are formed by low-angle, detachment faulting in subaerial extensional environments.
    Description: This research was supported by ONR grants N00014-90-J-1621 and N00014-94-1-0466 and NSF grant OCE-9300708.
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  • 66
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 1994. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 99, no. B6 (1994): 11937–11958, doi:10.1029/94JB00338.
    Description: First-order (transform) and second-order ridge-axis discontinuities create a fundamental segmentation of the lithosphere along mid-ocean ridges, and in slow spreading crust they commonly are associated with exposure of subvolcanic crust and upper mantle. We analyzed available morphological, gravity, and rock sample data from the Atlantic Ocean to determine whether consistent structural patterns occur at these discontinuities and to constrain the processes that control the patterns. The results show that along their older, inside-corner sides, both first-and second-order discontinuities are characterized by thinned crust and/or mantle exposures as well as by irregular fault patterns and a paucity of volcanic features. Crust on young, outside-corner sides of discontinuities has more normal thickness, regular fault patterns, and common volcanic forms. These patterns are consistent with tectonic thinning of crust at inside corners by low-angle detachment faults as previously suggested for transform discontinuities by Dick et al. [1981] and Karson [1990]. Volcanic upper crust accretes in the hanging wall of the detachment, is stripped from the inside-corner footwall, and is carried to the outside comer. Gravity and morphological data suggest that detachment faulting is a relatively continuous, long-lived process in crust spreading at 〈25–30 mm/yr, that it rnay be intermittent at intermediate rates of 25–40 mm/yr, and that it is unlikely to occur at faster rates. Detachment surfaces are dissected by later, high-angle faults formed during crustal uplift into the rift mountains; these faults can cut through the entire crust and may be the kinds of faults imaged by seismic reflection profiling over Cretaceous North Atlantic crust. Off-axis variations in gravity anomalies indicate that slow spreading crust experiences cyclic magmatic/amagmatic extension and that a typical cycle is about 2 m.y. long. During magmatic phases the footwall of the detachment fault probably exposes lower crustal gabbros, although these rocks locally may have an unconformable volcanic carapace. During amagmatic extension the detachment may dip steeply through the crust, providing a mechanism whereby upper mantle ultramafic rocks can be exhumed very rapidly, perhaps in as little as 0.5 m.y. Together, detachment faulting and cyclic magmatic/amagmatic extension create strongly heterogeneous lithosphere both along and across isochrons in slow spreading ocean crust.
    Description: This research was supported by Office of Naval Research grants N00014-90-J-1621 and N00014-91-J-1433 and by National Science Foundation grants OCE 8716713 and OCE 9020408.
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  • 67
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 1974. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 79 (1974): 4115–4118, doi:10.1029/JC079i027p04115.
    Description: Nephelometer measurements in the Puerto Rico trench record a midwater light scattering maximum at the depth of the near-bottom nepheloid layer found in the deep Atlantic basin to the northwest. This midwater maximum is best developed near the south slope of the trench and is interpreted as a southeasterly continuation of the western boundary undercurrent, which has been documented along the continental rise of eastern North America. The eastward-advecting core of the flow overrides clearer colder antarctic bottom water that enters the trench from the east. A near-bottom nepheloid layer, best developed in the eastern part of the trench, appears to be associated with the westward-flowing antarctic bottom current.
    Description: The nephelometer program at Lamont has been supported by the National Science Foundation under grant GA 41657 and GA 27281 and the Office of Naval Research under contract NOOOI4-67-A-0108-0004. One of us (B.E.T.) was supported by a Lamont-Doherty PostDoctoral Fellowship during this research.
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  • 68
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 1979. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 84, no. B2 (1979): 687–695, doi:10.1029/JB084iB02p00687.
    Description: Laboratory and in situ velocity measurements have been made on six piston cores taken in the western North Atlantic Ocean. Sediments from the southwestern Bermuda Rise and Greater Antilles Outer Ridge are clays having velocities ranging mostly from 1500 to 1530 m/s and velocity gradients near 1 s−1. In cores from the Nares Abyssal Plain, the clayey sediments have comparable velocities, but interbedded silty turbidites exhibit much higher values (up to 1690 m/s). Velocity gradients are slightly higher in the abyssal-plain cores. After the laboratory measurements are corrected to in situ conditions, they show reasonable agreement in average velocity and velocity gradient with in situ measurements, although the in situ velocities average 10–12 m/s higher in the clayey cores and 15–20 m/s higher in the turbidites. This difference may be caused by reduction in the dynamic frame bulk modulus and/or the dynamic shear modulus due to visually undetected coring disturbance. The profilometer used to obtain the in situ measurements does not record the fine-scale variations in velocity that were measured in the laboratory, but it accurately determines average velocities and velocity gradient. Where cores were closely spaced (2–12 km apart), inter-core correlations in lithology, velocity, and bulk properties are possible. Fluctuations in the latter two parameters are very similar in position and magnitude from core to core, suggesting either that effects of coring disturbance are small or that they are uniform in a given kind of sedimentary bed. Inter-core comparison also shows that some beds are laterally discontinuous as a result of local (less than a few kilometers) patterns of seafloor erosion and deposition.
    Description: At Lamont-Doherty Geological Observatory the study of acoustic and physical properties of sea-floor sediments is supported by the Office of Naval Research under contract N00014-75-C-0210, and at Applied Research Laboratories, University of Texas, by ONR contract N00014-76-C-0117.
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  • 69
    Publication Date: 2022-05-25
    Description: © The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS ONE 8 (2013): e54069, doi:10.1371/journal.pone.0054069.
    Description: Structural change in both the habitat and reef-associated fish assemblages within spatially managed coral reefs can provide key insights into the benefits and limitations of Marine Protected Areas (MPAs). While MPA zoning effects on particular target species are well reported, we are yet to fully resolve the various affects of spatial management on the structure of coral reef communities over decadal time scales. Here, we document mixed affects of MPA zoning on fish density, biomass and species richness over the 21 years since establishment of the Saba Marine Park (SMP). Although we found significantly greater biomass and species richness of reef-associated fishes within shallow habitats (5 meters depth) closed to fishing, this did not hold for deeper (15 m) habitats, and there was a widespread decline (38% decrease) in live hard coral cover and a 68% loss of carnivorous reef fishes across all zones of the SMP from the 1990s to 2008. Given the importance of live coral for the maintenance and replenishment of reef fishes, and the likely role of chronic disturbance in driving coral decline across the region, we explore how local spatial management can help protect coral reef ecosystems within the context of large-scale environmental pressures and disturbances outside the purview of local MPA management.
    Description: Funding was provided by the Saba Conservation Foundation ((SCF), King Abdullah University of Science and Technology, The Australian National University and Australian Research Council.
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  • 70
    Publication Date: 2022-05-25
    Description: © The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS ONE 8 (2013): e70966, doi:10.1371/journal.pone.0070966.
    Description: Rising sea temperatures are causing significant destruction to coral reef ecosystems due to coral mortality from thermally-induced bleaching (loss of symbiotic algae and/or their photosynthetic pigments). Although bleaching has been intensively studied in corals, little is known about the causes and consequences of bleaching in other tropical symbiotic organisms. This study used underwater visual surveys to investigate bleaching in the 10 species of anemones that host anemonefishes. Bleaching was confirmed in seven anemone species (with anecdotal reports of bleaching in the other three species) at 10 of 19 survey locations spanning the Indo-Pacific and Red Sea, indicating that anemone bleaching is taxonomically and geographically widespread. In total, bleaching was observed in 490 of the 13,896 surveyed anemones (3.5%); however, this percentage was much higher (19–100%) during five major bleaching events that were associated with periods of elevated water temperatures and coral bleaching. There was considerable spatial variation in anemone bleaching during most of these events, suggesting that certain sites and deeper waters might act as refuges. Susceptibility to bleaching varied between species, and in some species, bleaching caused reductions in size and abundance. Anemones are long-lived with low natural mortality, which makes them particularly vulnerable to predicted increases in severity and frequency of bleaching events. Population viability will be severely compromised if anemones and their symbionts cannot acclimate or adapt to rising sea temperatures. Anemone bleaching also has negative effects to other species, particularly those that have an obligate relationship with anemones. These effects include reductions in abundance and reproductive output of anemonefishes. Therefore, the future of these iconic and commercially valuable coral reef fishes is inextricably linked to the ability of host anemones to cope with rising sea temperatures associated with climate change.
    Description: This work was supported by funding from the Red Sea Research Center at the King Abdullah University of Science and Technology (KAUST), The ARC Centre of Excellence for Coral Reef Studies, the National Science Foundation (OCE 0424688), the Coral Reef Initiatives for the Pacific (CRISP), the TOTAL Foundation, Populations Fractionees et Insulares (PPF EPHE), the Connectivity Working Group of the Global University of Queensland – World Bank – Global Environmental Facility Project, Coral Reef Target Research and Capacity Building for Management, Great Barrier Reef Marine Park Authority, and the Australian Government Department of Sustainability, Environment, Water, Population and Communities. J-P Hobbs is supported by a UWA-AIMS-CSIRO fellowship.
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  • 71
    Publication Date: 2022-05-25
    Description: © The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS ONE 8 (2013): e78275, doi:10.1371/journal.pone.0078275.
    Description: Anaerobic ammonia oxidation (anammox) as an important nitrogen loss pathway has been reported in marine oxygen minimum zones (OMZs), but the community composition and spatial distribution of anammox bacteria in the eastern tropical North Pacific (ETNP) OMZ are poorly determined. In this study, anammox bacterial communities in the OMZ off Costa Rica (CRD-OMZ) were analyzed based on both hydrazine oxidoreductase (hzo) genes and their transcripts assigned to cluster 1 and 2. The anammox communities revealed by hzo genes and proteins in CRD-OMZ showed a low diversity. Gene quantification results showed that hzo gene abundances peaked in the upper OMZs, associated with the peaks of nitrite concentration. Nitrite and oxygen concentrations may therefore colimit the distribution of anammox bacteria in this area. Furthermore, transcriptional activity of anammox bacteria was confirmed by obtaining abundant hzo mRNA transcripts through qRT-PCR. A novel hzo cluster 2x clade was identified by the phylogenetic analysis and these novel sequences were abundant and widely distributed in this environment. Our study demonstrated that both cluster 1 and 2 anammox bacteria play an active role in the CRD-OMZ, and the cluster 1 abundance and transcriptional activity were higher than cluster 2 in both free-living and particle-attached fractions at both gene and transcriptional levels.
    Description: National Science Foundation (OCE #0961098) Hong Kong Research Grants Council (661911 and 661912) Chinese Academy of Science (SIDSSE-BR-201301).
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  • 72
    Publication Date: 2022-05-25
    Description: © The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS ONE 8 (2013): e77671, doi:10.1371/journal.pone.0077671.
    Description: Bottlenose dolphins (Tursiops truncatus) produce many vocalisations, including whistles that are unique to the individual producing them. Such “signature whistles” play a role in individual recognition and maintaining group integrity. Previous work has shown that humans can successfully group the spectrographic representations of signature whistles according to the individual dolphins that produced them. However, attempts at using mathematical algorithms to perform a similar task have been less successful. A greater understanding of the encoding of identity information in signature whistles is important for assessing similarity of whistles and thus social influences on the development of these learned calls. We re-examined 400 signature whistles from 20 individual dolphins used in a previous study, and tested the performance of new mathematical algorithms. We compared the measure used in the original study (correlation matrix of evenly sampled frequency measurements) to one used in several previous studies (similarity matrix of time-warped whistles), and to a new algorithm based on the Parsons code, used in music retrieval databases. The Parsons code records the direction of frequency change at each time step, and is effective at capturing human perception of music. We analysed similarity matrices from each of these three techniques, as well as a random control, by unsupervised clustering using three separate techniques: k-means clustering, hierarchical clustering, and an adaptive resonance theory neural network. For each of the three clustering techniques, a seven-level Parsons algorithm provided better clustering than the correlation and dynamic time warping algorithms, and was closer to the near-perfect visual categorisations of human judges. Thus, the Parsons code captures much of the individual identity information present in signature whistles, and may prove useful in studies requiring quantification of whistle similarity.
    Description: Arik Kershenbaum is a Postdoctoral Fellow at the National Institute for Mathematical and Biological Synthesis, an Institute sponsored by the National Science Foundation, the U.S. Department of Homeland Security, and the U.S. Department of Agriculture through NSF Award #EF-0832858, with additional support from The University of Tennessee, Knoxville. Part of this work was conducted while Arik Kershenbaum was provided with a doctoral scholarship by the University of Haifa. Funding for access to the dolphins for recordings was provided by Dolphin Quest and the Chicago Zoological Society.
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  • 73
    Publication Date: 2021-11-09
    Description: In this study, we present a three-dimensional P wave upper-mantle tomography model of the southwest Iberian margin and Alboran Sea based on teleseismic arrival times recorded by Iberian and Moroccan land stations and by a seafloor network deployed for 1 year in the Gulf of Cadiz area during the European Commission Integrated observations from NEAR shore sourcES of Tsunamis: towards an early warning system (EC NEAREST) project. The three-dimensional model was computed down to 600 kmdepth. The tomographic images exhibit significant velocity contrasts, as large as 3%, confirming the complex evolution of this plate boundary region. Prominent high-velocity anomalies are found beneath Betics-Alboran Sea, off-shore southwest Portugal, and north Portugal, at sublithospheric depths. The transition zones between high- and low-velocity anomalies in southwest and south Iberia are associated to the contact of oceanic and continental lithosphere. The fast structure below the Alboran Sea-Granada area depicts an L-shaped body steeply dipping from the uppermost mantle to the transition zone where it becomes less curved. This anomaly is consistent with the results of previous tomographic investigations and recent geophysical data such as stress distribution, GPS measurements of plate motion, and anisotropy patterns. In the Atlantic domain, under the Horseshoe Abyssal Plain, the main feature is a high-velocity zone found at uppermost mantle depths. This feature appears laterally separated from the positive anomaly recovered in the Alboran domain by the interposition of low-velocity zones which characterize the lithosphere beneath the southwest Iberian peninsula margin, suggesting that there is no continuity between the high-velocity anomalies of the two domains west and east of the Gibraltar Strait.
    Description: Published
    Description: 1587–1601
    Description: 3.3. Geodinamica e struttura dell'interno della Terra
    Description: JCR Journal
    Description: restricted
    Keywords: Upper-mantle seismic tomography ; land and marine seismic networks ; SW Iberian margin ; Alboran Sea ; Atlantic domain ; Gulf of Cadiz ; 03. Hydrosphere::03.01. General::03.01.08. Instruments and techniques ; 04. Solid Earth::04.01. Earth Interior::04.01.02. Geological and geophysical evidences of deep processes ; 04. Solid Earth::04.06. Seismology::04.06.07. Tomography and anisotropy
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 74
    Publication Date: 2022-05-26
    Description: © The Author(s), 2012. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS One 7 (2012): e50221, doi:10.1371/journal.pone.0050221.
    Description: Lymphocytes are a key component of the immune system and their differentiation and function are directly influenced by cancer. We examined peripheral blood lymphocyte (PBL) gene expression as a biomarker of illness and treatment effect using the Affymetrix Human Gene ST1 platform in patients with metastatic renal cell carcinoma (mRCC) who received combined treatment with IL-2, interferon-?-2a and dendritic cell vaccine. We examined gene expression, cytokine levels in patient serum and lymphocyte subsets as determined by flow cytometry (FCM). Pre-treatment PBLs from patients with mRCC exhibit a gene expression profile and serum cytokine profile consistent with inflammation and proliferation not found in healthy donors (HD). PBL gene expression from patients with mRCC showed increased mRNA of genes involved with T-cell and TREG-cell activation pathways, which was also reflected in lymphocyte subset distribution. Overall, PBL gene expression post-treatment (POST) was not significantly different than pre-treatment (PRE). Nevertheless, treatment related changes in gene expression (post-treatment minus pre-treatment) revealed an increased expression of T-cell and B-cell receptor signaling pathways in responding (R) patients compared to non-responding (NR) patients. In addition, we observed down-regulation of TREG-cell pathways post-treatment in R vs. NR patients. While exploratory in nature, this study supports the hypothesis that enhanced inflammatory cytotoxic pathways coupled with blunting of the regulatory pathways is necessary for effective anti-cancer activity associated with immune therapy. This type of analysis can potentially identify additional immune therapeutic targets in patients with mRCC.
    Description: This work was supported by grants from the National Institutes of Health (RO1 CA5648, R21CA112761, P20RR016437, and P30CA023108).
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  • 75
    Publication Date: 2022-05-26
    Description: © The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS ONE 8 (2013): e59284, doi:10.1371/journal.pone.0059284.
    Description: Toothed whales (Cetacea, odontoceti) use biosonar to navigate their environment and to find and catch prey. All studied toothed whale species have evolved highly directional, high-amplitude ultrasonic clicks suited for long-range echolocation of prey in open water. Little is known about the biosonar signals of toothed whale species inhabiting freshwater habitats such as endangered river dolphins. To address the evolutionary pressures shaping the echolocation signal parameters of non-marine toothed whales, we investigated the biosonar source parameters of Ganges river dolphins (Platanista gangetica gangetica) and Irrawaddy dolphins (Orcaella brevirostris) within the river systems of the Sundarban mangrove forest. Both Ganges and Irrawaddy dolphins produced echolocation clicks with a high repetition rate and low source level compared to marine species. Irrawaddy dolphins, inhabiting coastal and riverine habitats, produced a mean source level of 195 dB (max 203 dB) re 1 µPapp whereas Ganges river dolphins, living exclusively upriver, produced a mean source level of 184 dB (max 191) re 1 µPapp. These source levels are 1–2 orders of magnitude lower than those of similar sized marine delphinids and may reflect an adaptation to a shallow, acoustically complex freshwater habitat with high reverberation and acoustic clutter. The centroid frequency of Ganges river dolphin clicks are an octave lower than predicted from scaling, but with an estimated beamwidth comparable to that of porpoises. The unique bony maxillary crests found in the Platanista forehead may help achieve a higher directionality than expected using clicks nearly an octave lower than similar sized odontocetes.
    Description: This study was made possible through the logistical and field support of the Bangladesh Cetacean Diversity Project of the Wildlife Conservation Society, and funded by frame grants from the Danish Natural Science Foundation to PTM. FHJ was supported by the PhD School of Aquatic Sciences, Denmark, and is currently funded by a postdoctoral fellowship from the Danish Council for Independent Research | Natural Sciences. VMJ was supported by a fellowship of the Wissenschaftskolleg Berlin. PTM was supported by frame grants from the Danish Natural Science Foundation.
    Repository Name: Woods Hole Open Access Server
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  • 76
    Publication Date: 2022-05-26
    Description: © The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS ONE 8 (2013): e56335, doi:10.1371/journal.pone.0056335.
    Description: The deep marine subsurface is a vast habitat for microbial life where cells may live on geologic timescales. Because DNA in sediments may be preserved on long timescales, ribosomal RNA (rRNA) is suggested to be a proxy for the active fraction of a microbial community in the subsurface. During an investigation of eukaryotic 18S rRNA by amplicon pyrosequencing, unique profiles of Fungi were found across a range of marine subsurface provinces including ridge flanks, continental margins, and abyssal plains. Subseafloor fungal populations exhibit statistically significant correlations with total organic carbon (TOC), nitrate, sulfide, and dissolved inorganic carbon (DIC). These correlations are supported by terminal restriction length polymorphism (TRFLP) analyses of fungal rRNA. Geochemical correlations with fungal pyrosequencing and TRFLP data from this geographically broad sample set suggests environmental selection of active Fungi in the marine subsurface. Within the same dataset, ancient rRNA signatures were recovered from plants and diatoms in marine sediments ranging from 0.03 to 2.7 million years old, suggesting that rRNA from some eukaryotic taxa may be much more stable than previously considered in the marine subsurface.
    Description: This work was performed with funding from the Center for Dark Energy Biosphere Investigations (C-DEBI) to William Orsi (OCE-0939564) and The Ocean Life Institute (WHOI) to Virginia Edgcomb (OLI-27071359).
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  • 77
    Publication Date: 2022-05-26
    Description: © The Author(s), 2012. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS One 7 (2012): e50015, doi:10.1371/journal.pone.0050015.
    Description: Deep-sea hydrothermal vents are subject to major disturbances that alter the physical and chemical environment and eradicate the resident faunal communities. Vent fields are isolated by uninhabitable deep seafloor, so recolonization via dispersal of planktonic larvae is critical for persistence of populations. We monitored colonization near 9°50′N on the East Pacific Rise following a catastrophic eruption in order to address questions of the relative contributions of pioneer colonists and environmental change to variation in species composition, and the role of pioneers at the disturbed site in altering community structure elsewhere in the region. Pioneer colonists included two gastropod species: Ctenopelta porifera, which was new to the vent field, and Lepetodrilus tevnianus, which had been rare before the eruption but persisted in high abundance afterward, delaying and possibly out-competing the ubiquitous pre-eruption congener L. elevatus. A decrease in abundance of C. porifera over time, and the arrival of later species, corresponded to a decrease in vent fluid flow and in the sulfide to temperature ratio. For some species these successional changes were likely due to habitat requirements, but other species persisted (L. tevnianus) or arrived (L. elevatus) in patterns unrelated to their habitat preferences. After two years, disturbed communities had started to resemble pre-eruption ones, but were lower in diversity. When compared to a prior (1991) eruption, the succession of foundation species (tubeworms and mussels) appeared to be delayed, even though habitat chemistry became similar to the pre-eruption state more quickly. Surprisingly, a nearby community that had not been disturbed by the eruption was invaded by the pioneers, possibly after they became established in the disturbed vents. These results indicate that the post-eruption arrival of species from remote locales had a strong and persistent effect on communities at both disturbed and undisturbed vents.
    Description: The authors received funding from National Science Foundation grant OCE-0424953, WHOI Deep Ocean Exploration Institute, WHOI Summer Student Fellow program, Woods Hole Partnership in Education Program, IFREMER and CNRS, Fondation TOTAL Chair Extreme Marine Environment, Biodiversity and Global change.
    Repository Name: Woods Hole Open Access Server
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  • 78
    Publication Date: 2022-05-26
    Description: Author Posting. © American Geophysical Union, 1990. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 95, no. B11 (1990): 17555–17569, doi:10.1029/JB095iB11p17555.
    Description: The Comer seamounts in the western North Atlantic and Great Meteor seamount “chain” in the eastern North Atlantic are thought to progress in age from Late Cretaceous through late Cenozoic. They both presumably formed by volcanism above the New England hotspot when first the North American plate, and then the Mid-Atlantic Ridge axis and African plate, moved over the hotspot. High-resolution, multibeam bathymetry of the seamounts shows geomorphic features such as guyots, terraces, and a base level plateau (Cruiser plateau) that we interpret to have formed at sea level. We have backtracked these features to sea level along the North Atlantic crustal age-depth curve in order to estimate their ages. The derived age pattern of volcanism indicates formation of the Comer seamounts at ca. 80 Ma to 76 Ma, with migration of the Mid-Atlantic Ridge plate boundary over the hotspot and formation of the Cruiser plateau about 76 Ma. Seamount ages suggest that subsequent volcanism on the African plate moved first northward, in the Late Cretaceous to early Cenozoic (Plato, Tyro, and Atlantis seamount groups), then southward to Great Meteor Seamount in the late Cenozoic. Recurrent volcanism appears to have occurred at some seamounts up to 20–30 m.y. after their initial passage over the hotspot. It would thus appear that intralithospheric conduits can link the hotspot to old seamounts several hundred kilometers away.
    Description: This work was supported in part by ONR Contract N00014-82-C-0019 to B. Tucholke at Woods Hole Oceanographic Institution.
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  • 79
    Publication Date: 2013-09-07
    Description: The aim of this study was to examine racial differences in long-term survival among hemodialysis patients after coronary artery bypass grafting (CABG). To our knowledge this has not been previously addressed in the literature. Black and white hemodialysis patients undergoing first-time, isolated CABG procedures between 1992 and 2011 were compared. Survival probabilities were computed using the Kaplan-Meier product-limit method and stratified by race. Hazard ratios (HR) and 95% confidence intervals (CI) were computed using a Cox regression model. A total of 207 (2%) patients were on hemodialysis at the time of CABG. White (n = 80) hemodialysis patients had significantly decreased 5-year survival compared with black (n = 127) patients (adjusted HR = 1.9, 95% CI = 1.2–2.8). Our finding provides useful outcome information for surgeons, primary care providers, and their patients.
    Print ISSN: 1661-7827
    Electronic ISSN: 1660-4601
    Topics: Energy, Environment Protection, Nuclear Power Engineering , Medicine
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  • 80
    Publication Date: 2013-09-07
    Description: Background: Limited by data availability, most disease maps in the literature are for relatively large and subjectively-defined areal units, which are subject to problems associated with polygon maps. High resolution maps based on objective spatial units are needed to more precisely detect associations between disease and environmental factors. Method: We propose to use a Restricted and Controlled Monte Carlo (RCMC) process to disaggregate polygon-level location data to achieve mapping aggregate data at an approximated individual level. RCMC assigns a random point location to a polygon-level location, in which the randomization is restricted by the polygon and controlled by the background (e.g., population at risk). RCMC allows analytical processes designed for individual data to be applied, and generates high-resolution raster maps. Results: We applied RCMC to the town-level birth defect data for New Hampshire and generated raster maps at the resolution of 100 m. Besides the map of significance of birth defect risk represented by p-value, the output also includes a map of spatial uncertainty and a map of hot spots. Conclusions: RCMC is an effective method to disaggregate aggregate data. An RCMC-based disease mapping maximizes the use of available spatial information, and explicitly estimates the spatial uncertainty resulting from aggregation.
    Print ISSN: 1661-7827
    Electronic ISSN: 1660-4601
    Topics: Energy, Environment Protection, Nuclear Power Engineering , Medicine
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  • 81
    Publication Date: 2013-09-07
    Description: The predominant microorganisms in samples taken from shower heads in residences in the Korean city “N” were Stenotrophomonas maltophilia, Sphingomonas paucimobilis, Acidovorax temperans, and Microbacterium lacticum. Legionella was not detected in this case. The volatile organic compounds (VOCs) vinylacetate, NN-DMA, cis-1,2-dichloroethylene, epichlorohydrin, and styrene were measured in five types of plastic pipes: PVC, PB, PP, PE, and cPVC. The rate of multiplication of the heterotrophic plate count (HPC) attached on the copper pipe in contact with hot tap water was higher than the rate for the copper pipe in contact with cold tap water. Biofilm accumulation on stainless steel pipes with added acetate (3 mg/L) was 2.56 times higher than the non-supplemented condition. Therefore, the growth of HPC in the pipe system was affected by the type and availability of nutrients and depended on variables such as heating during the hot water supply.
    Print ISSN: 1661-7827
    Electronic ISSN: 1660-4601
    Topics: Energy, Environment Protection, Nuclear Power Engineering , Medicine
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  • 82
    Publication Date: 2013-09-07
    Description: Author(s): G. Berner, A. Müller, F. Pfaff, J. Walde, C. Richter, J. Mannhart, S. Thiess, A. Gloskovskii, W. Drube, M. Sing, and R. Claessen We present a detailed study of the electronic structure and band alignment in LaAlO 3 /SrTiO 3 oxide heterostructures by hard x-ray photoelectron spectroscopy. Our spectroscopic measurements find no evidence for the strong potential gradient within the polar LaAlO 3 film predicted by band theory. Due to... [Phys. Rev. B 88, 115111] Published Fri Sep 06, 2013
    Keywords: Electronic structure and strongly correlated systems
    Print ISSN: 1098-0121
    Electronic ISSN: 1095-3795
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  • 83
    Publication Date: 2013-09-07
    Description: Author(s): Jifa Tian, Yongjin Jiang, Isaac Childres, Helin Cao, Jiangping Hu, and Yong P. Chen The Hall resistance of a homogeneous electron system is well known to be antisymmetric with respect to the magnetic field and the sign of charge carriers. We have observed that such symmetries no longer hold in planar hybrid structures consisting of partly single layer graphene (SLG) and partly bila... [Phys. Rev. B 88, 125410] Published Fri Sep 06, 2013
    Keywords: Surface physics, nanoscale physics, low-dimensional systems
    Print ISSN: 1098-0121
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  • 84
    Publication Date: 2013-09-07
    Description: Author(s): A. Tan, J. Li, C. A. Jenkins, E. Arenholz, A. Scholl, C. Hwang, and Z. Q. Qiu Py/FeMn/Cu(001) and Py/FeMn/Ni/Cu(001) films were grown and studied as a function of both the FeMn and the Ni thicknesses using rotating magneto-optic Kerr effect and x-ray magnetic circular dichroism. For Py/FeMn/Cu(001), we find that the FeMn antiferromagnetic order switches the sign of the Py fou... [Phys. Rev. B 88, 104404] Published Fri Sep 06, 2013
    Keywords: Magnetism
    Print ISSN: 1098-0121
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  • 85
    Publication Date: 2013-09-07
    Description: Author(s): Bettina Gertjerenken and Christoph Weiss For the dynamics of Bose-Einstein condensates (BECs), differences between mean-field (Gross-Pitaevskii) physics and N -particle quantum physics often disappear if the BEC becomes larger and larger. In particular, the time scale for which both dynamics agree should thus become larger if the particle n... [Phys. Rev. A 88, 033608] Published Fri Sep 06, 2013
    Keywords: Matter waves and collective properties of cold atoms and molecules
    Print ISSN: 1050-2947
    Electronic ISSN: 1094-1622
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  • 86
    Publication Date: 2013-09-07
    Description: Author(s): J. Ignacio Cirac, Spyridon Michalakis, David Pérez-García, and Norbert Schuch We analyze a criterion which guarantees that the ground states of certain many-body systems are stable under perturbations. Specifically, we consider PEPS, which are believed to provide an efficient description, based on local tensors, for the low energy physics arising from local interactions. In o... [Phys. Rev. B 88, 115108] Published Fri Sep 06, 2013
    Keywords: Electronic structure and strongly correlated systems
    Print ISSN: 1098-0121
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  • 87
    Publication Date: 2013-09-07
    Description: Author(s): N. Drichko, R. Hackl, and J. Schlueter We compare the photoluminescence spectra of the low-temperature Mott insulator κ -(BEDT–TTF) 2 Cu[N(CN) 2 ]Cl ( T MIT =40 K) with spectra of metallic κ -(BEDT–TTF) 2 Cu[N(CN) 2 ]Br, which is superconducting below T c =11.8 K, in the temperature range between 300 and 20 K. In the Mott insulating state of κ -(BEDT–TT... [Phys. Rev. B 88, 115109] Published Fri Sep 06, 2013
    Keywords: Electronic structure and strongly correlated systems
    Print ISSN: 1098-0121
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  • 88
    Publication Date: 2013-09-07
    Description: Author(s): G. Scherrer, M. Hofman, W. Śmigaj, M. Kadic, T.-M. Chang, X. Mélique, D. Lippens, O. Vanbésien, B. Cluzel, F. de Fornel, S. Guenneau, and B. Gralak Ground-plane cloaks, which transform a curved mirror into a flat one, and recently reported at wavelengths ranging from the optical to the visible spectrum, bring the realm of optical illusion a step closer to reality. However, all carpet-cloaking experiments have thus far been carried out in the fa... [Phys. Rev. B 88, 115110] Published Fri Sep 06, 2013
    Keywords: Electronic structure and strongly correlated systems
    Print ISSN: 1098-0121
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  • 89
    Publication Date: 2013-09-07
    Description: Author(s): V. Kokoouline, A. Wearne, R. Lefebvre, and O. Atabek Exceptional points (EPs) corresponding to resonance coalescence (i.e., complex energy degeneracy and identical wave functions) occur in many areas of non-Hermitian physics and, in particular, in laser-induced molecular dynamics for specific choices of two control parameters. We have previously shown... [Phys. Rev. A 88, 033408] Published Fri Sep 06, 2013
    Keywords: Atomic and molecular processes in external fields, including interactions with strong fields and short pulses
    Print ISSN: 1050-2947
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  • 90
    Publication Date: 2013-09-07
    Description: Author(s): Yiyan Sun, Houchen Chang, Michael Kabatek, Young-Yeal Song, Zihui Wang, Michael Jantz, William Schneider, Mingzhong Wu, E. Montoya, B. Kardasz, B. Heinrich, Suzanne G. E. te Velthuis, Helmut Schultheiss, and Axel Hoffmann Strong damping enhancement in nm-thick yttrium iron garnet (YIG) films due to Pt capping layers was observed. This damping is substantially larger than the expected damping due to conventional spin pumping, is accompanied by a shift in the ferromagnetic resonance field, and can be suppressed by the ... [Phys. Rev. Lett. 111, 106601] Published Fri Sep 06, 2013
    Keywords: Condensed Matter: Electronic Properties, etc.
    Print ISSN: 0031-9007
    Electronic ISSN: 1079-7114
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  • 91
    Publication Date: 2013-09-07
    Description: Author(s): Rintaro Inoue, Makoto Nakamura, Kazuya Matsui, Toshiji Kanaya, Koji Nishida, and Masahiro Hino We studied the distribution of glass transition temperature ( T g ) through neutron reflectivity in a poly(methyl methacrylate) (PMMA) thin film supported on a silicon substrate with a five-layered PMMA thin film consisting of deuterated-PMMA and hydrogenated-PMMA. The depth distribution of T g was succ... [Phys. Rev. E 88, 032601] Published Fri Sep 06, 2013
    Keywords: Polymers
    Print ISSN: 1539-3755
    Electronic ISSN: 1550-2376
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  • 92
    Publication Date: 2013-09-07
    Description: Author(s): Volodymyr Borshch, Sergij V. Shiyanovskii, and Oleg D. Lavrentovich Electrically induced reorientation of nematic liquid crystal (NLC) molecules caused by dielectric anisotropy of the material is a fundamental phenomenon widely used in modern technologies. Its Achilles heel is a slow (millisecond) relaxation from the field-on to the field-off state. We present an el... [Phys. Rev. Lett. 111, 107802] Published Fri Sep 06, 2013
    Keywords: Soft Matter, Biological, and Interdisciplinary Physics
    Print ISSN: 0031-9007
    Electronic ISSN: 1079-7114
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  • 93
    Publication Date: 2013-09-07
    Description: Bile acid diarrhoea (BAD) is a common disease that requires expensive imaging to diagnose. We have tested the efficacy of a new method to identify BAD, based on the detection of differences in volatile organic compounds (VOC) in urine headspace of BAD vs. ulcerative colitis and healthy controls. A total of 110 patients were recruited; 23 with BAD, 42 with ulcerative colitis (UC) and 45 controls. Patients with BAD also received standard imaging (Se75HCAT) for confirmation. Urine samples were collected and the headspace analysed using an AlphaMOS Fox 4000 electronic nose in combination with an Owlstone Lonestar Field Asymmetric Ion Mobility Spectrometer (FAIMS). A subset was also tested by gas chromatography, mass spectrometry (GCMS). Linear Discriminant Analysis (LDA) was used to explore both the electronic nose and FAIMS data. LDA showed statistical differences between the groups, with reclassification success rates (using an n-1 approach) at typically 83%. GCMS experiments confirmed these results and showed that patients with BAD had two chemical compounds, 2-propanol and acetamide, that were either not present or were in much reduced quantities in the ulcerative colitis and control samples. We believe that this work may lead to a new tool to diagnose BAD, which is cheaper, quicker and easier that current methods.
    Electronic ISSN: 1424-8220
    Topics: Chemistry and Pharmacology , Electrical Engineering, Measurement and Control Technology
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  • 94
    Publication Date: 2013-09-07
    Description: This paper is a theoretical analysis of mirror tilt in a Michelson interferometer and its effect on the radiant flux over the active area of a rectangular photodetector or image sensor pixel. It is relevant to sensor applications using homodyne interferometry where these opto-electronic devices are employed for partial fringe counting. Formulas are derived for radiant flux across the detector for variable location within the fringe pattern and with varying wave front angle. The results indicate that the flux is a damped sine function of the wave front angle, with a decay constant of the ratio of wavelength to detector width. The modulation amplitude of the dynamic fringe pattern reduces to zero at wave front angles that are an integer multiple of this ratio and the results show that the polarity of the radiant flux changes exclusively at these multiples. Varying tilt angle causes radiant flux oscillations under an envelope curve, the frequency of which is dependent on the location of the detector with the fringe pattern. It is also shown that a fringe count of zero can be obtained for specific photodetector locations and wave front angles where the combined effect of fringe contraction and fringe tilt can have equal and opposite effects. Fringe tilt as a result of a wave front angle of 0.05° can introduce a phase measurement difference of 16° between a photodetector/pixel located 20 mm and one located 100 mm from the optical origin.
    Electronic ISSN: 1424-8220
    Topics: Chemistry and Pharmacology , Electrical Engineering, Measurement and Control Technology
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  • 95
    Publication Date: 2013-09-07
    Description: Various types of grafts have been traditionally used to restore damaged bones. In the late 1960s, a strong interest was raised in studying ceramics as potential bone grafts due to their biomechanical properties. A bit later, such synthetic biomaterials were called bioceramics. In principle, bioceramics can be prepared from diverse materials but this review is limited to calcium orthophosphate-based formulations only, which possess the specific advantages due to the chemical similarity to mammalian bones and teeth. During the past 40 years, there have been a number of important achievements in this field. Namely, after the initial development of bioceramics that was just tolerated in the physiological environment, an emphasis was shifted towards the formulations able to form direct chemical bonds with the adjacent bones. Afterwards, by the structural and compositional controls, it became possible to choose whether the calcium orthophosphate-based implants remain biologically stable once incorporated into the skeletal structure or whether they were resorbed over time. At the turn of the millennium, a new concept of regenerative bioceramics was developed and such formulations became an integrated part of the tissue engineering approach. Now calcium orthophosphate scaffolds are designed to induce bone formation and vascularization. These scaffolds are often porous and harbor different biomolecules and/or cells. Therefore, current biomedical applications of calcium orthophosphate bioceramics include bone augmentations, artificial bone grafts, maxillofacial reconstruction, spinal fusion, periodontal disease repairs and bone fillers after tumor surgery. Perspective future applications comprise drug delivery and tissue engineering purposes because calcium orthophosphates appear to be promising carriers of growth factors, bioactive peptides and various types of cells.
    Electronic ISSN: 1996-1944
    Topics: Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics
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  • 96
    Publication Date: 2013-09-10
    Description: Author(s): Azadeh Moradinezhad Dizgah, Scott Dodelson, and Antonio Riotto We study the impact of primordial non-Gaussianity on the density profile of dark matter halos by using the semianalytical model introduced recently by Dalal et al. which relates the peaks of the initial linear density field to the final density profile of dark matter halos. Models with primordial no... [Phys. Rev. D 88, 063513] Published Mon Sep 09, 2013
    Keywords: Astrophysics & Cosmology
    Print ISSN: 0556-2821
    Electronic ISSN: 1089-4918
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  • 97
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    American Physical Society (APS)
    Publication Date: 2013-09-10
    Description: Author(s): Sandipan Sengupta Motivated by a recent proposal (by Koslowski-Sahlmann) of a kinematical representation in loop quantum gravity (LQG) with a nondegenerate vacuum metric, we construct a polymer quantization of the parametrized massless scalar field theory on a Minkowskian cylinder. The diffeomorphism covariant kinema... [Phys. Rev. D 88, 064016] Published Mon Sep 09, 2013
    Keywords: General relativity, gravitation
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  • 98
    facet.materialart.
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    American Physical Society (APS)
    Publication Date: 2013-09-10
    Description: Author(s): Koji Ishiwata and Mark B. Wise We study the impact that a heavy generation of vectorlike leptons can have on the value of the electric dipole moment of the electron, and the rates for the flavor violating processes μ → e γ and μ →3 e . The smallness of the charged lepton masses suggests that at least some of the Yukawa coupling constan... [Phys. Rev. D 88, 055009] Published Mon Sep 09, 2013
    Keywords: Beyond the standard model
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  • 99
    Publication Date: 2013-09-10
    Description: Author(s): Chiu Man Ho and Thomas J. Weiler [Phys. Rev. D 88, 069901] Published Mon Sep 09, 2013
    Keywords: Errata
    Print ISSN: 0556-2821
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  • 100
    Publication Date: 2013-09-10
    Description: Author(s): Riccardo Borsato, Olof Ohlsson Sax, Alessandro Sfondrini, Bogdan Stefański, Jr., and Alessandro Torrielli We determine the all-loop dressing phases of the AdS 3 /CFT 2 integrable system related to type IIB string theory on AdS 3 ×S 3 ×T 4 by solving the recently found crossing relations and studying their singularity structure. The two resulting phases present a novel structure with respect to the ones appearin... [Phys. Rev. D 88, 066004] Published Mon Sep 09, 2013
    Keywords: String theory
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