ALBERT

All Library Books, journals and Electronic Records Telegrafenberg

Your email was sent successfully. Check your inbox.

An error occurred while sending the email. Please try again.

Proceed reservation?

Export
Filter
  • Articles  (321)
  • Copernicus  (321)
  • National Academy of Sciences
  • 2010-2014  (321)
  • 2000-2004
  • 1980-1984
  • 1945-1949
  • 1925-1929
  • 2010  (321)
  • 42429
  • 48837
Collection
  • Articles  (321)
Publisher
  • Copernicus  (321)
  • National Academy of Sciences
Years
  • 2010-2014  (321)
  • 2000-2004
  • 1980-1984
  • 1945-1949
  • 1925-1929
Year
Journal
Topic
  • 1
    Publication Date: 2010-10-19
    Description: Equatorial podzols are soils characterized by thick sandy horizons overlying more clayey horizons. Organic matter produced in the topsoil is transferred in depth through the sandy horizons and accumulate at the transition, at a depth varying from 1 to more than 3 m, forming deep horizons rich in organic matter (Bh horizons). Although they cover great surfaces in the equatorial zone, these soils are still poorly known. Studying podzols from Amazonia, we found out that the deep Bh horizons in poorly drained podzol areas have a thickness higher than 1 m and store unexpected amounts of carbon. The average for the studied area was 66.7 ± 5.8 kg C m−2 for the deep Bh and 86.8 ± 7.1 kg C m−2 for the whole profile. Extrapolating to the podzol areas of the whole Amazonian Basin has been possible thanks to digital maps, giving an order of magnitude around 13.6 ± 1.1 Pg C, at least 12.3 Pg C higher than previous estimates. This assessment should be refined by additional investigations, not only in Amazonia but in all equatorial areas where podzols have been identified. Because of the lack of knowledge on the quality and behaviour of the podzol organic matter, the question of the feedback between the climate and the equatorial podzol carbon cycle is open.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 2
    Publication Date: 2010-10-13
    Description: The global geographic distribution of biodiversity and biomes is determined by species-specific physiological tolerances to climatic constraints. Current models implement empirical bioclimatic relationships to predict present-day vegetation patterns and to forecast biodiversity changes and biome shifts under climatic change. In this paper, we consider plant functional trade-offs and their interactions with climatic changes to forecast and explain biodiversity changes and biome shifts. The Jena Diversity model (JeDi) simulates plant survival according to essential plant functional trade-offs, including eco-physiological processes such as water uptake, photosynthesis, allocation, reproduction and phenology. We apply JeDi to quantify biodiversity changes and biome shifts between present-day and a range of possible future climates from two scenarios (A2 and B1) and seven global climate models using metrics of plant functional richness and functional identity. Our results show (i) a significant biodiversity loss in the tropics, (ii) an increase in biodiversity at mid and high latitudes, and (iii) a poleward shift of biomes. While these results are consistent with the findings of empirical approaches, we are able to explain them in terms of the plant functional trade-offs involved in the allocation, metabolic and reproduction strategies of plants. We conclude that general aspects of plant physiological tolerances can be derived from plant functional trade-offs, which may provide a useful process- and trait-based alternative to bioclimatic relationships in order to address questions about the causes of biodiversity changes and biome shifts.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 3
    Publication Date: 2010-10-11
    Description: Sequences affiliated to Syndiniales (Marine alveolate, MALV) regularly dominate 18S rDNA genetic libraries of nearly all marine ecosystems investigated so far. Among them, Amoebophryidae (MALV group II) is composed of numerous and genetically distant environmental sequences, where Amoebophrya is the only known and formally described genus. Amoebophrya species include virulent pathogens for a wide range of dinoflagellate species. Beside their regular occurrence in marine ecosystems, their quantitative distribution and the environmental factors triggering host infection have barely been studied in open oligotrophic waters. In order to understand the functional role of these parasites in natural environments, we studied the distribution and contribution to the eukaryotic community of the small free-living stage of Amoebophryidae (the dinospores) along a transect in the Mediterranean Sea, as well as their host diversity at three oligotrophic stations. Dinospores were more abundant at a coastal station (max. 1.5 × 103 cells ml−1) than in oligotrophic waters (max. 51 ± 16.3 cells ml−1), where they represented 10.3 to 34.9% of the total eukaryotic community at 40 and 30 m depth, respectively and 21.2% on average along the water column. Positive correlation was found between dinospore occurrence and higher concentration of NO3 + NO2 at the coastal station. At selected stations, out of 38 different dinoflagellates taxa identified, 15 were infected, among which a majority were not recognized as Amoebophryidae host so far. Prevalences (percentage of infected cells) generally varied between 2% and 10%, with a notable exception for Blepharocysta paulsenii for which 25% of cells were infected at the station C. The present study shows that dinospores are able to thrive, infects and most probably exert a control on host populations both in coastal and ultra-oligotrophic open waters. Our results emphasize the role of parasitism in microbial food web dynamics and ultimately on biogeochemical cycles.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 4
    Publication Date: 2010-10-11
    Description: In the last decades, the mining exploitation of large areas in Lusatia (South-eastern Germany) but also in other mining areas worldwide has led to the formation of hundreds of pit lakes. Pyrite oxidation in the surrounding dumps makes many such lakes extremely acidic (pH 〈 3). The biogeochemical functioning of these lakes is mainly governed by cycling of iron. This represents a relevant ecological problem and intensive research has been conducted to understand the involved biogeochemical processes and develop bioremediation strategies. Despite some studies reporting the presence of living organisms (mostly bacteria, algae, and macro-invertebrates) under such acidic conditions, and their trophic interactions, their potential impact on the ecosystem functioning was poorly investigated. The present study aimed to assess the influence of chironomid larvae on oxygen dynamics and iron cycle in the sediment of acidic pit lakes. In the Mining Lake 111, used as a study case since 1996, Chironomus crassimanus (Insecta, Diptera) is the dominant benthic macro-invertebrate species and occurs at relatively high abundances in shallow water. A 16-day laboratory experiment using microcosms combined with high resolution measurements (DET gel probes and O2 microsensors) was carried out. The burrowing activity of C. crassimanus larvae induced a 3-fold increase of the oxygen consumption by sediment, and stimulated the mineralization of organic matter in the upper layers of the sediment. The iron cycle was also impacted (e.g. lower rates of reduction and oxidation, increase of iron-oxidizing bacteria abundance, stimulation of mineral formation) but with no significant effect on the iron flux at the sediment-water interface, and thus on the water acidity budget. This work provides the first assessment of bioturbation in an acidic mining lake and shows that its influence on biogeochemistry cannot be neglected.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 5
    Publication Date: 2010-09-24
    Description: In this study two crop species, winter wheat (Triticum aestivum) and sugar beet (Beta vulgaris), were monitored over the course of five days during the entire season. We investigated the link of the main physiological leaf-level mechanisms, stomatal conductance and efficiency of photosynthetic energy conversion on canopy transpiration and photosynthetic CO2 uptake. The physiological status of 900 leaves of different plants in a natural canopy was characterized on the leaf level using chlorophyll fluorescence. Gas exchange measurements were performed at leaves of 12 individual plants of each species. Eddy covariance flux measurements provided information on CO2, water and energy fluxes on the field scale. The diurnal pattern of stomatal resistance on the leaf level was especially for sugar beet similar to the canopy resistance, which indicates that stomatal resistance may have a large impact on the bulk canopy resistance. The diurnal changes in canopy resistance appeared to have less effect on the evapotranspiration, which was mainly dependent on the amount of incoming radiation. The similar diurnal pattern of water use efficiency on the leaf level and on the canopy level during the day, underline the influence of physiological mechanisms of leaves on the canopy. The greatest difference between water use efficiency on leaf and canopy occurred in the morning, mainly due to an increase of stomatal resistance. Limitation of CO2 uptake occurred in the afternoon when water vapor pressure deficit increased. Maxima of net ecosystem productivity corresponded to the highest values of photosynthetic capacity of single leaves, which occurred before solar noon. Within the course of a few hours, photosynthetic efficiency and stomatal resistance of leaves varied and these variations were the reason for diurnal variations in the carbon fluxes of the whole field. During the seasonal development, the leaf area index was the main factor driving carbon and water exchange, when both crops were still growing. During senescence of winter wheat these structural parameters did not account for changes in canopy fluxes and remaining high green leaf material of sugar beet did not present the reduction in canopy fluxes due to beginning dormancy. We thus hypothesize that the functional status of plants is also important to correctly predict carbon and water fluxes throughout the season. We propose to additionally include the physiological status of plants in carbon flux models in order to improve the quality of the simulation of diurnal patterns of carbon fluxes.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 6
    Publication Date: 2010-09-23
    Description: The biogeochemistry of carbon and nutrients (N, P) in the surface layer of the ocean strongly depends on the interaction between C, N and P at the cell level and at the population level where interaction between primary producers (phytoplankton) and remineralizers (heterotrophic bacteria) impact the overall stock and dynamics of organic carbon. To understand these interactions in the surface layer of the Mediterranean Sea, we implemented, using Eco3M, a multi-element, steady state, mechanistic model. This cell-based model intend to represent the growth of phytoplankton and heterotrophic bacteria under various amount of nutrients. As a results, it displays the expected biogeochemical characteristics of the system and give us insight on the expected interaction between phytoplankton and heterotrophic bacteria both in term of competition for inorganic nutrients and in term of commensalism for organic carbon. In this study, we found a good quantitative agreement between model results and literrature data for stocks and fluxes of the western Mediterranean basin. In addition, for phytoplankton we show how the uncoupling between carbon production and growth could impact the overall DOC dynamic and based on these results, we proposed a new explanantion for the observed DOC accumulation in the surface layer of the Mediterranean Sea.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 7
    Publication Date: 2010-09-20
    Description: Ocean acidification might reduce the ability of calcifying plankton to produce and maintain their shells of calcite, or of aragonite, the more soluble form of CaCO3. In addition to possibly large biological impacts, reduced CaCO3 production corresponds to a negative feedback on atmospheric CO2. In order to explore the sensitivity of the ocean carbon cycle to increasing concentrations of atmospheric CO2, we use the new biogeochemical Bern3D/PISCES model. The model reproduces the large scale distributions of biogeochemical tracers. With a range of sensitivity studies, we explore the effect of (i) using different parameterizations of CaCO3 production fitted to available laboratory and field experiments, of (ii) letting calcite and aragonite be produced by auto- and heterotrophic plankton groups, and of (iii) using carbon emissions from the range of the most recent IPCC Representative Concentration Pathways (RCP). Under a high-emission scenario, the CaCO3 production of all the model versions decreases from ~1 Pg C yr−1 to between 0.36 and 0.82 Pg C yr−1 by the year 2100. By the year 2500, the ratio of open water CaCO3 dissolution to production stabilizes at a value that is 30–50% higher than at pre-industrial times when carbon emissions are set to zero after 2100. Despite the wide range of parameterizations, model versions and scenarios included in our study, the changes in CaCO3 production and dissolution resulting from ocean acidification provide only a small feedback on atmospheric CO2 of 1–11 ppm by the year 2100.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 8
    Publication Date: 2010-09-15
    Description: Winter CO2 fluxes represent an important component of the annual carbon budget in northern ecosystems. Understanding winter respiration processes and their responses to climate change is also central to our ability to assess terrestrial carbon cycle and climate feedbacks in the future. The factors influencing the spatial and temporal pattern of winter respiration (RECO) of northern ecosystems are poorly understood. For this reason, we analyzed eddy covariance flux data sets from 57 ecosystem sites ranging from ~35° N to ~70° N. Deciduous forests carry the highest winter RECO ratios (9.7–10.5 g C m−2 d−1), when winter is defined as the period during which air temperature remained below 0 °C. By contrast, wetland ecosystems had the lowest winter RECO (2.1–2.3 g C m−2 d−1). Evergreen needle-leaved forests, grasslands and croplands were characterized by intermediate winter RECO values of 7.4–7.9 g C m−2 d−1, 5.8–6.0 g C m−2 d−1, and 5.2–5.3 g C m−2 d−1, respectively. Cross site analysis showed that winter air or soil temperature, and the seasonal amplitude of the leaf area index inferred from satellite observation, which is a proxy for the amount of litter available for RECO in the subsequent winter, are the two main factors determining spatial pattern of daily mean winter RECO. Together, these two factors can explain 71% (Tair, ΔLAI) or 69% (Tsoil, ΔLAI) of the spatial variance of winter RECO across the 57 sites. The spatial temperature sensitivity of daily winter RECO was determined empirically by fitting an Arrhenius relationship to the data. The activation energy parameter of this relationship was found to decrease at increasing soil temperature at a rate of 83.1 KJ ° C-1 (r = −0.32, p 〈 0.05), which implies a possible dampening of the increase in winter RECO due to global warming. The interannual variability of winter RECO is better explained by soil temperature than by air temperature, likely due to the insulating effects of snow cover. The increase in winter RECO with a 1 °C warming based calculated from the spatial analysis was almost that double that calculated from the temporal analysis. Thus, models that calculate the effects of warming on RECO based only on spatial analyses could be over-estimating the impact.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 9
    Publication Date: 2010-09-14
    Description: Several studies sustained the possibility that a photochemical reflectance index (PRI) directly obtained from satellite data can be used as a proxy for ecosystem light use efficiency (LUE) in diagnostic models of gross primary productivity. This modelling approach would avoid the complications that are involved in using meteorological data as constraints for a fixed maximum LUE. However, no unifying model predicting LUE across climate zones and time based on MODIS PRI has been published to date. In this study, we evaluate the efficiency with which MODIS-based PRI can be used to estimate ecosystem light use efficiency at study sites of different plant functional types and vegetation densities. Our objective is to examine if known limitations such as dependance on viewing and illumination geometry can be overcome and a single PRI-based model of LUE (i.e. based on the same reference band) can be applied under a wide range of conditions. Furthermore, we were interested in the effect of using different faPAR (fraction of absorbed photosynthetically active radiation) products on the in-situ LUE used as ground truth and thus on the whole evaluation exercise. We found that estimating LUE at site-level based on PRI reduces uncertainty compared to the approaches relying on a maximum LUE reduced by minimum temperature and vapour pressure deficit. Despite the advantages of using PRI to estimate LUE at site-level, we could not establish an universally applicable light use efficiency model based on MODIS PRI. Models that were optimised for a pool of data from several sites did not perform well.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 10
    Publication Date: 2010-09-14
    Description: Analysis of 20-year time-series of the vertically averaged salinity and nutrient data in the South Adriatic shows that the two parameters are subject to strong decadal variability. In addition, nutrient and salinity variations are out of phase. Nutrients in the Ionian and in the Adriatic vary in parallel except that often the nutrient content in the Adriatic is lower than in the Ionian, a fact that has been attributed to primary producer consumption following the winter convective mixing. Horizontal distribution of the nitracline depth in the Ionian suggests that nutrient content in the Adriatic is a function of the circulation pattern in the Ionian that wells up or wells down the nitracline: cyclonic circulation causes a downwelling of the nitracline along the borders of the Northern Ionian Gyre (NIG) and a decrease in the nutrient content of the water flowing into the Adriatic across the Otranto Strait, and vice versa. The circulation variations are due to the Bimodal Oscillating System, i.e. the feedback mechanism between the Adriatic and Ionian. Inversion of the sense of the NIG results in the advection of Modified Atlantic Water or of the Levantine/Eastern Mediterranean (EMed) waters in the Adriatic. Here, we show that the presence of allochtonous organisms from Atlantic/Western Mediterranean (WMed) and EMed/temperate zone in the Adriatic are concomitant with the anticyclonic and cyclonic circulations, respectively, of the NIG. As a consequence of the NIG inversions, in the Ionian, this highly oligotrophic zone shows annual blooms in its central area only during cyclonic circulation. On the basis of the results presented, a revision of the theory of Adriatic ingressions formulated in the early 1950s is proposed.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 11
    Publication Date: 2010-10-20
    Description: The northern Gulf of Aqaba, in the northeastern branch of the Red Sea, is a clear example of humans effecting on the health of fringing reefs. Our results demonstrate the effect of an anthropogenic stressor on the carbon and oxygen stable isotopes compositions, namely net pen fish farming with annual fish production of 2.4×106 kg yr−1. We sampled and studied long coral cores from stressed, remote and intermediate localities and short- term transplanted Porites sp. colonies from the west side of the Gulf of Aqaba to a remote and a polluted sites, respectively. The data shows that mariculture and other human related stressors did not influence the oxygen isotopic signature over a period of two decades. However, the carbon fractionation changed along a geographical gradient and depended on proximity to the source of contamination. We suggest that δ13C of coral skeleton is a promising proxy for identifying long term processes of coral growth under high nutrient loads and potential disturbances to the coral reef ecology.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 12
    Publication Date: 2010-09-01
    Description: Coupled-carbon-climate simulations are an essential tool for predicting the impact of human activity onto the climate and biogeochemistry. Here we incorporate prognostic desert dust and anthropogenic aerosols into the CCSM3.1 coupled carbon-climate model and explore the resulting interactions with climate and biogeochemical dynamics through a series of transient anthropogenic simulations (20th and 21st centuries) and sensitivity studies. The inclusion of prognostic aerosols into this model has a small net global cooling effect on climate but does not significantly impact the globally averaged carbon cycle; we argue that this is likely to be because the CCSM3.1 model has a small climate feedback onto the carbon cycle. We propose a mechanism for including desert dust and anthropogenic aerosols into a simple carbon-climate feedback analysis to explain the results of our and previous studies. Inclusion of aerosols has statistically significant impacts on regional climate and biogeochemistry, in particular through the effects on the ocean nitrogen cycle and primary productivity of altered iron inputs from desert dust deposition.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 13
    Publication Date: 2010-10-19
    Description: Rivers collect and transport reactive nitrogen to coastal seas as nitrate, ammonium, dissolved organic nitrogen (DON), or particulate nitrogen. DON is an important component of reactive nitrogen in rivers and is suspected to contribute to coastal eutrophication, but little is known about seasonality of DON loads and turnover within rivers. We measured the concentrations and the isotope ratios 15N/14N of combined DON+NH4+ (δ15DON+NH4+), nitrate (δ15N−NO3−) and particulate nitrogen (δ15PN) in the non-tidal Elbe River (SE North Sea, NW Europe) over a period of 2 years (June 2005 to December 2007) at monthly resolution. Combined DON+NH4+ concentrations ranged from 22 to 75 μM and comprised nearly 23% of total dissolved nitrogen in the Elbe River in annual mean; PN and nitrate concentrations ranged from 11 to 127 μM, and 33 to 422 μM, respectively. Combined PN and DON+NH4+ concentrations were, to a first approximation, inversely correlated to nitrate concentrations. δ15DON+NH4+, which varied between from 0.8‰ to 11.5‰, changed in parallel to δ15PN (range 6 to 10‰), and both were anti-correlated to δ15N−NO3− (range 6 to 23‰). Seasonal patterns of DON+NH4+ concentrations and δ15DON+NH4+ diverge from those expected from biological DON+NH4+ production in the river alone and suggest that the elution of organic fertilisers significantly affects the DON+NH4+ pool in the Elbe River.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 14
    Publication Date: 2010-08-27
    Description: Despite the ecological importance of Trichodesmium spp. for the global oceanic nitrogen budget, there is limited information on their trace metal composition in field samples. We report dissolved (
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 15
    Publication Date: 2010-08-30
    Description: Cell-specific leucine incorporation rates were determined in early summer across the open stratified Mediterranean Sea along vertical profiles from 0 to 200 m. During the period of our study, the bulk leucine incorporation rate was on average 5.0 ± 4.0 (n=31) pmol leu l−1 h−1. After 3H-radiolabeled leucine incorporation and SyBR Green I staining, populations were sorted using flow cytometry. Heterotrophic prokaryotes (Hprok) were divided in several clusters according to the cytometric properties of side scatter and green fluorescence of the cells: the low nucleic acid content cells (LNA) and the high nucleic acid content cells (HNA), with high size and low size (HNA-hs and HNA-ls, respectively). LNA cells represented 45 to 63% of the Hprok abundance between surface and 200 m, and significantly contributed to the bulk activity, from 17 to 55% all along the transect. The HNA/LNA ratio of cell-specific activities was on average 2.1 ± 0.7 (n=31). Among Hprok populations from surface samples (0 down to the deep chlorophyll depth, DCM), HNA-hs was mostly responsible for the leucine incorporation activity. Its cell-specific activity was up to 13.3 and 6.9-fold higher than that of HNA-ls and LNA, respectively, and it varied within a wide range of values (0.9–54.3×10−21 mol leu cell−1 h−1). At the opposite, ratios between the specific activities of the 3 populations tended to get closer to each other, below the DCM, implying a potentially higher homogeneity in activity of Hprok in the vicinity of nutriclines. Prochlorococcus cells were easily sorted near the DCM and displayed cell-specific activities equally high, sometimes higher than the HNA-hs group (2.5–55×10−21 mol leu cell−1 h−1). We then showed that all the sorted populations were key-players in leucine incorporation into proteins. The mixotrophic feature of certain photosynthetic prokaryotes and the non-negligible activity of LNA cells all over Mediterranean were reinforced.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 16
    Publication Date: 2010-08-25
    Description: Oxygen minimum zones (OMZs), known as suboxic layers mainly localized in the Eastern Boundary Upwelling Systems, are expanding since the 20th "high CO2" century, probably due to the global warming. OMZs are also known to contribute significantly to the oceanic production of N2O, a greenhouse gas (GHG) more efficient than CO2. However, the contribution of the OMZs on the oceanic sources and sinks budget of CO2, the main GHG, still remains to be established. We present here the dissolved inorganic carbon (DIC) structure, associated locally with the Chilean OMZ and globally with the main most intense OMZs (O22225 μmol/kg, up to 2350 μmol/kg) have been reported over the whole OMZ thickness, allowing to define for all studied OMZs a Carbon Maximum Zone (CMZ). The CMZs-OMZs constitute the largest carbon reserves of the ocean in subsurface waters and could induce a positive feedback for the atmosphere during upwelling activity, as potential direct local sources of CO2. The CMZ paradoxically presents a slight "carbon deficit" in its core, meaning a DIC increase from the oxygenated ocean to the OMZ lower than the corresponding O2 decrease (assuming classical C/O molar ratios). This "carbon deficit" would be related to thermal mechanisms affecting faster O2 than DIC (due to the carbonate buffer effect) and occurring upstream in warm waters (e.g., in the Equatorial Divergence), where the CMZ-OMZ core originates. The "carbon deficit" in the CMZ core would be mainly compensated locally at the oxycline, by a "carbon excess" induced by a specific remineralization. Indeed, a possible co-existence of bacterial heterotrophic and autotrophic processes usually occurring at different depths could stimulate an intense aerobic-anaerobic remineralization, inducing deviation of C/O molar ratio from the canonical Redfield ratios. Further studies to confirm these results for all OMZs are required to understand the OMZ effects on both climatic feedback mechanisms and marine ecosystem perturbations.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 17
    Publication Date: 2010-09-29
    Description: The distribution of dissolved CH4 in the Southern Ocean at 140° E was measured during the austral summer. Surface CH4 was supersaturated on average, and the calculated mean sea-air flux rate was 0.32 μmol m−2 d−1. The vertical distributions exhibited a CH4 maximum at approximately 125 m (ΔCH4, 2.94 nM) below the chlorophyll-rich layer, suggesting a relationship between CH4 production and plankton dynamics in this area. CH4 oxidation and ocean movement characteristics in the deep layer led to the enrichment and fluctuation of δ13CCH4. We estimated the influence of Southern Ocean CH4, a source of isotopically heavy CH4 to the atmosphere, on the global CH4 budget to be approximately 0.19 Gg d−1.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 18
    Publication Date: 2010-08-25
    Description: Rainfall and vegetation across Africa are known to resonate with the coupled ocean-atmosphere phenomena of El Niño Southern Oscillation (ENSO) and the Indian Ocean Dipole (IOD). However, the regional-scale implications of sea surface temperature variability for Africa's carbon sources and sinks have received little focused attention, particularly in the case of IOD. Furthermore, studies exploring the interactive effects of ENSO and IOD when coincident are lacking. This analysis uses remotely sensed vegetation change plus a land surface model driven with observed meteorology to investigate how rainfall, vegetation, and photosynthesis across Africa respond to these climate oscillations. In addition to the relatively well-known ENSO forcing, the IOD induces large departures of photosynthesis across much of Africa associated with anomalies in rainfall and vegetation greenness. More importantly, sizeable independent effects can be suppressed or even reversed by destructive interferences during periods of simultaneous ENSO and IOD activity. For example, effects of positive IOD on southeastern Africa tended to dominate those of El Niño during their coincidence spanning 1997–1998, with sign reversal of El Niño's typically strong suppression of photosynthesis in this region. These findings call into question past analyses examining teleconnections to ENSO or IOD in isolation, and indicate the need to consider their simultaneous states when examining influences on hydroclimatic and ecological conditions across Africa.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 19
    Publication Date: 2010-08-26
    Description: The metabolic balance of the open waters supporting submerged macrophytes of the Doñana marsh (SW Spain) was investigated in spring, when community production is highest. The marsh community was net autotrophic with net community production rates averaging 0.61 g C m−2 d−1, and gross production rates exceeding community respiration rates by, on average, 43%. Net community production increased greatly with increasing irradiance, with the threshold irradiance for communities to become net autotrophic being 42 to 255 μE m−2 s−1, below which communities became net heterotrophic. Examination of the contributions of the benthic and the pelagic compartments showed the pelagic compartment to be strongly heterotrophic (average P/R ratio = 0.27), indicating that the metabolism of the pelagic compartment is strongly subsidised by excess organic carbon produced in the strongly autotrophic benthic compartment (average P/R = 1.58).
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 20
    Publication Date: 2010-08-16
    Description: Alpine soils are expected to contain large amounts of labile carbon (C) which may become a further source of atmospheric CO2 as a of global warming. However, there is little data available on these soils, and understanding of the influence of environmental factors on soil organic matter (SOM) turnover is limited. We extracted 30 cm deep cores from five grassland sites along a small elevation gradient from 2285 to 2653 m above sea level (a.s.l.) in the central Swiss Alps. Our aim was to determine the quantity, degree of stabilization and mean residence time (MRT) of SOM in relation to site factors such as temperature, soil pH, vegetation, and organic matter (OM) structure. Soil fractions obtained by size and density fractionation revealed a high proportion of labile particulate organic matter C (POM C %) mostly in the uppermost soil layers. POM C in the top 20 cm across the gradient ranged from 39.6–57.6% in comparison to 7.2–29.6% reported in previous studies for lower elevation soils (810–1960 m a.s.l.). At the highest elevation, MRTs measured by means of radiocarbon dating and turnover modelling, increased between fractions of growing stability from 90 years in free POM (fPOM) to 534 years in the mineral-associated fraction (mOM). Depending on elevation and pH, plant community data indicated considerable variation in the quantity and quality of litter input, and these patterns could be reflected in the dynamics of soil C. 13C NMR data confirmed the direct relationship of OM composition to MRT. While temperature is likely to be a major cause for the slow turnover rate observed, other factors such as litter quality and soil pH, as well as the combination of all factors, play an important role in causing small-scale variability of SOM turnover. Ignoring this interplay of controlling factors may impair the performance of models to project SOM responses to environmental change.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 21
    Publication Date: 2010-08-05
    Description: Ocean acidification, as a consequence of increasing marine pCO2, may have severe effects on the physiology of marine organisms. However, experimental studies remain scarce, in particular concerning fish. While adults will most likely remain relatively unaffected by changes in seawater pH, early life-history stages are potentially more sensitive – particularly the critical stage of fertilization, in which sperm motility plays a central role. In this study, the effects of ocean acidification (decrease of pH to 7.55) on sperm motility of Baltic cod, Gadus morhua, were assessed. We found no significant effect of decreased pH on sperm speed, rate of change of direction or percent motility for the population of cod analyzed. We predict that future ocean acidification will probably not pose a problem for sperm behavior, and hence fertilization success, of Baltic cod.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 22
    Publication Date: 2010-08-25
    Description: Twelve-years of eddy-covariance measurements conducted above a boreal Scots pine forest in Hyytiälä, Southern Finland, were analyzed to assess the seasonal and inter-annual variability of surface conductance (gs) and energy partitioning. The gs had distinct annual course, driven by the seasonal cycle of the Scots pine. Low gs (2–3 mm s−1 in April) restricted transpiration in springtime and caused the sensible heat flux to peak in May–June while evapotranspiration takes over later in July–August when gs is typically 5–7 mm s−1. Hence, during normal years Bowen ratio decreases from 4–6 in April to 0.7–0.9 in August. Sensitivity of gs to ambient vapor pressure deficit (D) was relatively constant but the reference value at D=1 kPa varied seasonally and between years. Only two drought episodes when volumetric soil moisture content in upper mineral soil decreased below 0.15 m3 m−3 occurred during the period. Below this threshold value transpiration was strongly reduced, which promoted sensible heat exchange increasing Bowen ratio to 3–4. Annual evapotranspiration varied between 218 and 361 mm and accounted between 50% and 90% of equilibrium evaporation. The forest floor contributed between 16 and 25% of the total evapotranspiration on annual scale. The fraction stayed similar over the observed range of environmental conditions including drought. The inter-annual variability of evapotranspiration could not be linked to any mean climate parameter while the summertime sensible heat flux and net radiation were well explained by global radiation. The energy balance closure varied annually between 0.66 and 0.95 and had a distinct seasonal cycle with worse closure in spring when large proportion of available energy is partitioned into sensible heat.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 23
    Publication Date: 2010-09-09
    Description: To clarify the factors controlling temporal and spatial variations of soil carbon dioxide (CO2), methane (CH4), and nitrous oxide (N2O) fluxes, we investigated these gas fluxes and environmental factors in a tropical rainforest in Peninsular Malaysia. Temporal variation of CO2 flux in a 2-ha plot was positively related to soil water condition and rainfall history. Spatially, CO2 flux was negatively related to soil water condition. When CO2 flux hotspots were included, no other environmental factors such as soil C or N concentrations showed any significant correlation. Although the larger area sampled in the present study complicates explanations of spatial variation of CO2 flux, our results support a previously reported bipolar relationship between the temporal and spatial patterns of CO2 flux and soil water condition observed at the study site in a smaller study plot. Flux of CH4 was usually negative with little variation, resulting in the soil at our study site functioning as a CH4 sink. Both temporal and spatial variations of CH4 flux were positively related to the soil water condition. Soil N concentration was also related to the spatial distribution of CH4 flux. Some hotspots were observed, probably due to CH4 production by termites, and these hotspots obscured the relationship between both temporal and spatial variations of CH4 flux and environmental factors. Temporal variation of N2O flux and soil N2O concentration was large and significantly related to the soil water condition, or in a strict sense, to rainfall history. Thus, the rainfall pattern controlled wet season N2O production in soil and its soil surface flux. Spatially, large N2O emissions were detected in wet periods at wetter and anaerobic locations, and were thus determined by soil physical properties. Our results showed that, even in Southeast Asian rainforests where distinct dry and wet seasons do not exist, variation in the soil water condition related to rainfall history controlled the temporal variations of soil CO2 flux, CH4 uptake, and N2O emission. The soil water condition associated with soil hydraulic properties was also the important controlling factor of the spatial distributions of these gas fluxes.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 24
    Publication Date: 2010-07-21
    Description: The roles of iron and light in controlling biomass and primary productivity are clearly established in the Southern Ocean. However, their influence on net community production (NCP) and carbon export remains to be quantified. To improve our understanding of NCP and carbon export production in the Subantarctic Zone (SAZ) and the northern reaches of the Polar Frontal Zone (PFZ), we conducted continuous onboard determinations of NCP as part of the Sub-Antarctic Sensitivity to Environmental Change (SAZ-Sense) study, which occurred in January–February 2007. Biological O2 supersaturation was derived from measuring O2/Ar ratios by equilibrator inlet mass spectrometry. Based on these continuous measurements, NCP during the austral summer 2007 in the Australian SAZ was approximately 43 mmol O2 m−2 d−1. Both gross primary productivity (estimated from the oxygen triple isotope anomaly) and NCP showed significant spatial variability, with larger values near the Subtropical front, and a general southward decrease. For shallower mixed layers (
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 25
    Publication Date: 2010-07-22
    Description: Seawater samples were collected in surface waters (2 and 5 m depths) of the Bay of Marseilles (Northwestern Mediterranean Sea; 5°17′30′′ E, 43°14′30′′ N) during one year from November 2007 to December 2008 and studied for total organic carbon (TOC) as well as chromophoric dissolved organic matter (CDOM) optical properties (absorbance and fluorescence). The annual mean value of surface CDOM absorption coefficient at 350 nm [aCDOM(350)] was very low (0.10 ± 0.02 m−1) with in comparison to values usually found in coastal waters, and no significant seasonal trend in aCDOM(350) could be determined. By contrast, the spectral slope of CDOM absorption (SCDOM) was significantly higher (0.023 ± 0.003 nm−1) in summer than in fall and winter periods (0.017 ± 0.002 nm−1), reflecting either CDOM photobleaching or production in surface waters during stratified sunny periods. The CDOM fluorescence, assessed through excitation emission matrices (EEMs), was dominated by protein-like component (peak T; 1.30–21.94 QSU) and marine humic-like component (peak M; 0.55–5.82 QSU), while terrestrial humic-like fluorescence (peak C; 0.34–2.99 QSU) remained very low. This reflected a dominance of relatively fresh material from biological origin within the CDOM fluorescent pool. At the end of summer, surface CDOM fluorescence was very low and strongly blue shifted, reinforcing the hypothesis of CDOM photobleaching. Our results suggested that unusual Rhône River plume eastward intrusion events may reach Marseilles Bay within 2–3 days and induce local phytoplankton blooms and subsequent fluorescent CDOM production (peaks M and T) without adding terrestrial fluorescence signatures (peak C). Besides Rhône River plumes, mixing events of the entire water column injected humic (peaks C and M) CDOM from the bottom into the surface and thus appeared also as an important source of CDOM in surface waters of the Marseilles Bay. Therefore, the assessment of CDOM optical properties, within the hydrological context, pointed out several biotic (in situ biological production, biological production within Rhône River plumes) and abiotic (photobleaching, mixing) factors controlling CDOM transport, production and removal in this highly urbanized coastal area.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 26
    Publication Date: 2010-07-19
    Description: In China, cumulative changes in climate and land use/land cover (LULC) from 1981 to 2000 had collectively affected the net productivity in the terrestrial ecosystem and thus the net carbon flux, both of which are intimately linked with the global carbon cycle. This paper represents the first national effort of its kind to systematically investigate the impact of changes of LULC on carbon cycle with high-resolution dynamic LULC data at the decadal scale (1990s and 2000s). The CEVSA was applied and driven by high resolution LULC data retrieved from remote sensing and climate data collected from two ground-based meteorological stations. In particular, it allowed us to simulate carbon fluxes (net primary productivity (NPP), vegetation carbon (VEGC) storage, soil carbon (SOC) storage, heterotrophic respiration (HR), and net ecosystem productivity (NEP)) and carbon storage from 1981 to 2000. Simulations generally agree with output from other models and results from bookkeeping approach. Based on these simulations, temporal and spatial variations in carbon storage and fluxes in China may be confirmed and we are able to relate these variations to climate variability during this period for detailed analyses to show influences of the LULC and environmental controls on NPP, NEP, HR, SOC, and VEGC. Overall, the increases in NPP were greater than HR in most of the time due to the effect of global warming with more precipitation in China from 1981 to 2000. With this trend, the NEP remained positive during that period, resulting in the net increase of total amount of carbon being stored by about 0.296 Pg C within the 20-years time frame. Because the climate effect was much greater than that of changes of LULC, the total carbon storage in China actually increased by about 0.17 Pg C within the 20 years. Such findings will contribute to the generation of control policies of carbon emissions under global climate change.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 27
    Publication Date: 2010-07-16
    Description: The degradation of organic matter to CH4 and CO2 was investigated in three different boreal peatland systems in Finland, a mesotrophic fen (MES), an oligotrophic fen (OLI), and an ombrotrophic peat (OMB). MES had similar production rates of CO2 and CH4, but the two nutrient-poor peatlands (OLI and OMB) produced in general more CO2 than CH4. δ13C analysis of CH4 and CO2 in the presence and absence methyl fluoride (CH3F), an inhibitor of acetoclastic methanogenesis, showed that CH4 was predominantly produced by hydrogenotrophic methanogenesis and that acetoclastic methanogenesis only played an important role in MES. These results, together with our observations concerning the collective inhibition of CH4 and CO2 production rates by CH3F, indicate that organic matter was degraded through different paths in the mesotrophic and the nutrient-poor peatlands. In the mesotrophic fen, the major process is canonical fermentation followed by acetoclastic and hydrogenotrophic methanogenesis, while in the nutrient-poor peat, organic matter was apparently degraded to a large extent by a different path which finally involved hydrogenotrophic methanogenesis. Our data suggest that degradation of organic substances in the oligotrophic environments was incomplete and involved the use of organic compounds as oxidants.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 28
    Publication Date: 2010-07-15
    Description: To date, North Sea tidal flat sediments have been intensively studied down to a depth of 5 m below sea floor (mbsf). However, little is known about the biogeochemistry, microbial abundance, and activity of sulfate reducers as well of methanogens in deeper layers. For this study, we hypothesized that the imprint of the paleo-environment is reflected in current microbiogeochemical processes. Therefore, 20 m-long cores were retrieved from the tidal-flat area of Spiekeroog Island, NW Germany. Two drill sites were selected with a close distance of only 900 meters, but where sedimentation occurred under different environmental conditions: first, a paleo-channel filled with Holocene sediments and second, a mainly Pleistocene sedimentary succession. In general, the numbers of bacterial 16S rRNA genes are one to two orders of magnitude higher than those of Archaea. The abundances of key genes for sulfate reduction and methanogenesis (dsrA and mcrA) correspond to the sulfate and methane profiles. A co-variance of these key genes at sulfate-methane interfaces and enhanced potential AOM rates suggest that anaerobic oxidation of methane may occur in these layers. Microbial and biogeochemical profiles are vertically stretched relative to 5 m-deep cores from shallower sediments in the same study area. Compared to the deep marine environment, the profiles are transitional between the shallow subsurface and the marine deep biosphere. Our interdisciplinary analysis shows that the microbial abundances and metabolic rates are elevated in the Holocene compared to Pleistocene sediments. However, this is mainly due to present environmental conditions such as pore water flow and organic matter availability. The paleo-environmental imprint is still visible but superimposed by these processes.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 29
    Publication Date: 2010-07-13
    Description: The attribution of spatial and temporal variations in terrestrial methane (CH4) flux is essential for assessing and mitigating CH4 emission from terrestrial ecosystems. In this study, we used a process-based model, the Dynamic Land Ecosystem Model (DLEM), in conjunction with spatial data of six major environmental factors to attribute the spatial and temporal variations in the terrestrial methane (CH4) flux over North America from 1979 to 2008 to six individual factors and their interaction. Over the past three decades, our simulation indicates that global change factors accumulatively contributed 43.05 Tg CH4-C (1 Tg = 1012 g) emission over North America, among which ozone (O3) pollution led to a reduced CH4 emission by 2.69 Tg CH4-C, all other factors including climate variability, nitrogen (N) deposition, rising atmospheric carbon dioxide (CO2), N fertilization, and land conversion increased terrestrial CH4 emissions by 40.37 Tg CH4-C, 0.42 Tg CH4-C, 6.95 Tg CH4-C, 0.11 Tg CH4-C, and 3.70 Tg CH4-C, respectively, and interaction between/among these global change factors led to a decline of CH4 emission by 5.80 Tg CH4-C. Climatic variability dominated the inter-annual variations in terrestrial CH4 fluxes at both continental and country levels. The relative importance of each environmental factor in determining the magnitude of methane flux shows substantially spatial variation across North America. This factorial attribution of CH4 fluxes over the North America might benefit policy makers who would like to curb climate warming by reducing CH4 emission.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 30
    Publication Date: 2010-07-13
    Description: Dimethyl sulphide (DMS) is an important precursor of cloud condensation nuclei (CCN), particularly in the remote marine atmosphere. The SE Pacific is consistently covered with a persistent stratocumulus layer that increases the albedo over this large area. It is not certain whether the source of CCN to these clouds is natural and oceanic or anthropogenic and terrestrial. This unknown currently limits our ability to reliably model either the cloud behaviour or the oceanic heat budget of the region. In order to better constrain the marine source of CCN it is necessary to have an improved understanding of the sea-air flux of DMS. Of the factors that govern the magnitude of this flux, the greatest unknown is the surface seawater DMS concentration. In the study area there is a paucity of such data, although previous measurements suggest that the concentration can be substantially variable. In the last decade a number of climatologies and algorithms have been devised to predict seawater DMS. Here we test some of these by comparing predictions with measurements of surface seawater made during the VAMOS Ocean-Cloud-Atmosphere-Land Study Regional Experiment (VOCALS-REx) in October and November of 2008. We conclude that none of the algorithms reproduce local variability in seawater DMS very well. From these findings, we recommend the best algorithm choice for the SE Pacific and suggest lines of investigation for future work.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 31
    Publication Date: 2010-06-10
    Description: The simulation of current and projected wildfires is crucial for predicting vegetation as well as pyrogenic emissions in the African continent. This study uses a data-driven approach to parameterize burned area models applicable to dynamic vegetation models (DVMs) and global circulation models (GCMs). Therefore we restricted our analysis to variables for which either projections based on climate scenarios are available, or which are calculated by DVMs and the spatial scale to one degree spatial resolution, a common scale for DVMs as well as GCMs. We used 9 years of data (2000–2008) for the variables tree and herb cover, precipitation over the last dry season, wet season and averaged over the last 2 years, a fire-danger index (the Nesterov index), population density and an annual proportion of area burned derived from the MODIS MCD45A1 product. Since the effect of fires on vegetation depends strongly on burning conditions, the timing of wildfires is of high interest too. We related the seasonal occurrence of wildfires to the Nesterov index and found a lognormal relationship with a maximum at a value of 104. We parameterized two generalized linear models, one with the full variable set (model I) and one (model II) considering only climate variables. All introduced variables resulted in an increase in model performance. Model I correctly predicts the spatial distribution and extent of fire prone areas though the total variability is underrepresented. Model II has a much lower performance in both aspects (correlation coefficient of predicted and observed ratio of burned area: 0.71 model I and 0.58 model II). An application of the models with simulated climate data ranging from 1980 to 2060 resulted in a strong decrease of burned area of ca. 20–25%. Since wildfires are an integral part of land use practices in Africa, this indicates a high loss in areas favourable for food production.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 32
    Publication Date: 2010-06-17
    Description: Lake Ohrid is a site of global importance for palaeoclimate research. This study presents results of diatom analysis of a ca. 136 ka sequence, Co1202, from the northeast of the lake basin. It offers the opportunity to test diatom response across two glacial-interglacial transitions and within the Last Glacial, while setting up taxonomic protocols for future research. The results are outstanding in demonstrating the sensitivity of diatoms to climate change, providing proxy evidence for temperature change marked by glacial-interglacial shifts between the dominant planktonic taxa, Cyclotella fottii and C. ocellata, and exact correlation with geochemical proxies to mark the start of the Last Interglacial at ca. 130 ka. Importantly, diatoms show much stronger evidence in this site for warming during MIS3 than recorded in other productivity-related proxies, peaking at ca. 39 ka, prior to the extreme conditions of the Last Glacial maximum. In the light of the observed patterns, and from the results of analysis of early Holocene sediments from a second core, Lz1120, the lack of a response to Late Glacial and early Holocene warming from ca. 15–7.4 ka suggests the Co1202 sequence may be compromised during this phase. After ca. 7.4 ka, there is evidence for enhanced nutrient enrichment compared to the Last Interglacial, following by a post-Medieval cooling trend. Taxonomically, morphological variability in C. fottii shows no clear trends linked to climate, but an intriguing change in central area morphology occurs after ca. 48.7 ka, coincident with a tephra layer. In contrast, C. ocellata shows morphological variation in the number of ocelli between interglacials, suggesting climatically-forced variation or evolutionary selection pressure. The application of a simple dissolution index does not track preservation quality very effectively, underlining the importance of diatom concentration data in future studies.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 33
    Publication Date: 2010-06-08
    Description: We determined the mean crustal uplifting rate during the late Holocene along the Soya Coast, Lützow-Holm Bay, East Antarctica, by dating a marine-lacustrine transition recorded in lake sediments. We focused on temporal variations in the chemical composition of sediments recovered from Lake Skallen Oike at Skallen and Lake Oyako at Skarvsnes. Both sets of lake sediments record environmental changes associated with a transition from marine to lacustrine (fresh water) settings, as indicated by analyses of sedimentary facies for carbon and nitrogen contents, nitrogen isotopic compositions (15N/14N), and major element concentrations. Changes in the dominant primary producers during the marine-lacustrine transition were also clearly revealed by biogenic Opal-A, diatom assemblages, and gradient gel electrophoresis (DGGE) with 16S rRNA gene analysis. Geochronology based on radiocarbon dating of acid-insoluble organic carbon suggested that the environmental transition from saline to fresh water occurred at 2940±100 cal yr BP at L. Skallen and 1060±90 cal yr BP at L. Oyako. Based on these data and a linear approximation model, we estimated a mean crustal uplifting rate of 3.6 mm yr−1 for the period since the marine-lacustrine transition via brackish condition; this uplift is attributed to glacial-isostatic rebound along the Soya Coast. The geological setting was the primary factor in controlling the emergence event and the occurrence of simultaneous changes in sedimentary and biological facies along the zone of crustal uplift.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 34
    Publication Date: 2010-05-07
    Description: Recent observations have shown that fluxes of ballast minerals (calcium carbonate, opal, and lithogenic material) and organic carbon fluxes are closely correlated in the bathypelagic zones of the ocean. Hence it has been hypothesized that incorporation of biogenic minerals within marine aggregates could either protect the organic matter from decomposition and/or increase the sinking velocity via ballasting of the aggregates. Here we present the first combined data on size, sinking velocity, carbon-specific respiration rate, and composition measured directly in three aggregate types; Emiliania huxleyi aggregates (carbonate ballasted), Skeletonema costatum aggregates (opal ballasted), and aggregates made from a mix of both E. huxleyi and S. costatum (carbonate and opal ballasted). Overall average carbon-specific respiration rate was ~0.13 d−1 and did not vary with aggregate type and size. Ballasting from carbonate resulted in 2- to 2.5-fold higher sinking velocities than aggregates ballasted by opal. We compiled literature data on carbon-specific respiration rate and sinking velocity measured in aggregate of different composition and sources. Compiled carbon-specific respiration rates (including this study) vary between 0.08 d−1 and 0.20 d−1. Sinking velocity increases with increasing aggregate size within homogeneous sources of aggregates. When compared across different particle and aggregate sources, however, sinking velocity appeared to be independent of particle or aggregate size. The calculated carbon remineralization length scale due to microbial respiration and sinking velocity of mm-large marine aggregates was higher for calcite ballasted aggregates as compared to opal-ballasted aggregates. It varied between 0.0002 m−1 and 0.0030 m−1, and decreased with increasing aggregate size.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 35
    Publication Date: 2010-05-10
    Description: A watermass-based framework is presented for a quantitative understanding of the processes controlling the cycling of carbon in the Southern Ocean. The approach is developed using a model simulation of the global carbon transports within the ocean and with the atmosphere. It is shown how the watermass framework sheds light on the interplay between biology, air-sea gas exchange, and internal ocean transport including diapycnal processes, and the way in which this interplay controls the large-scale ocean-atmosphere carbon exchange. The simulated pre-industrial regional patterns of DIC distribution and the global distribution of the pre-industrial air-sea CO2 fluxes compare well with other model results and with results from an ocean inversion method. The main differences are found in the Southern Ocean where the model presents a stronger CO2 outgassing south of the polar front, a result of the upwelling of DIC-rich deep waters into the surface layer. North of the subantarctic front the typical temperature-driven solubility effect produces a net ingassing of CO2. The biological controls on surface CO2 fluxes through primary production is generally smaller than the temperature effect on solubility. Novel to this study is also a Lagrangian trajectory analysis of the meridional transport of DIC. The analysis allows to evaluate the contribution of separate branches of the global thermohaline circulation (identified by watermasses) to the vertical distribution of DIC throughout the Southern Ocean and towards the global ocean. The most important new result is that the overturning associated with Subantarctic Mode Waters sustains a northward net transport of DIC (15.7×107 mol/s across 30° S). This new finding, which has also relevant implications on the prediction of anthropogenic carbon redistribution, results from the specific mechanism of SAMW formation and its source waters whose consequences on tracer transports are analyzed for the first time in this study.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 36
    Publication Date: 2010-05-19
    Description: Few studies have investigated whether responses to nutrient supply of mixed plant communities change under combined elevated CO2 and climate warming. In this study we analyzed the response of constructed temperate grassland communities to five levels of nitrogen (N) supply, ranging from 0 to 150 kg N ha−1, under two climate scenarios. Biomass of the plant communities responded positively to N supply in the current climate, but was insensitive to N supply in the future climate. This altered response was not the result of a changing response from a single species, but all species seemed to contribute to it. The weaker response in the future climate was caused by changes in N uptake rather than by changes in nitrogen use efficiency, as community N stocks showed the same response pattern as community biomass. Climate change apparently modified the relation between fertilizer N addition and plant available N.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 37
    Publication Date: 2010-05-06
    Description: The rugged submarine topography of the Azores supports a diverse heterozoan association resulting in intense biotically-controlled carbonate production and accumulation. In order to characterise this cold-water (C) factory a 2-year experiment was carried out to study the biodiversity of hardground communities and for budgeting carbonate production and degradation along a bathymetrical transect from the intertidal to bathyal 500 m depth. Seasonal temperatures peak in September (above a thermocline) and bottom in March (stratification diminishes) with a decrease in amplitude and absolute values with depth, and with tidal-driven short-term fluctuations. Measured seawater stable isotope ratios and levels of dissolved nutrients decrease with depth, as do the calcium carbonate saturation states. The photosynthetic active radiation shows a base of the euphotic zone in ~70 m and a dysphotic limit in ~150 m depth. Bioerosion, being primarily a function of light availability for phototrophic endoliths and grazers feeding upon them, is ~10 times stronger on the illuminated upside versus the shaded underside of substrates in the photic zone, with maximum rates in the intertidal (−631 g/m2/yr). Rates rapidly decline towards deeper waters where bioerosion and carbonate accretion are slow and epibenthic/endolithic communities take years to mature. Accretion rates are highest in the lower euphotic zone (955 g/m2/yr), where the substrate is less prone to hydrodynamic force. Highest rates are found – inversely to bioerosion – on downward facing substrates, suggesting that bioerosion may be a key factor governing the preferential settlement and growth of calcareous epilithobionts on downward facing substrates. In context of a latitudinal gradient, the Azores carbonate cycling rates plot between known values from the cold-temperate Swedish Kosterfjord and the tropical Bahamas, with a total range of two orders in magnitude. Carbonate budget calculations for the bathymetrical transect yield a mean 266.9 kg of epilithic carbonate production, −54.6 kg of bioerosion, and 212.3 kg of annual net carbonate production per metre of coastline in the Azores C factory.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 38
    Publication Date: 2010-05-21
    Description: Here we present stable isotope data from three sediment records from lakes that lie along the Macedonian-Albanian border (Lake Prespa: 1 core, and Lake Ohrid: 2 cores). The records only overlap for the last 40 kyr, although the longest record contains the MIS 5/6 transition (Lake Ohrid). The sedimentary characteristics of both lakes differ significantly between the glacial and interglacial phases. At the end of MIS 6 Lake Ohrid's water level was low (high δ18Ocalcite) and, although productivity was increasing (high calcite content), the carbon supply was mainly from inorganic catchment rock sources (high δ13Ccarb). During the last interglacial, calcite and TOC production and preservation increased, progressively lower δ18Ocalcite suggest increase in humidity and lake levels till around 115 ka. During ca. 80 ka to 11 ka the lake records suggest cold conditions as indicated by negligible calcite precipitation and low organic matter content. In Lake Ohrid δ13Corg are complacent, in contrast Lake Prespa shows consistently higher δ13Corg suggesting a low oxidation of 13C-depleted organic matter in agreement with a general deterioration of climate conditions during the glacial. From 15 ka to the onset of the Holocene, calcite and TOC begin to increase, suggesting lake levels were probably low (high δ18Ocalcite). In the Holocene (11 ka to present) enhanced productivity is manifested by high calcite and organic matter content. All three cores show an early Holocene characterised by low δ18Ocalcite, apart from the very early Holocene phase in Prespa where the lowest δ18Ocalcite occurs at ca. 7.5 ka, suggesting a phase of higher lake level only in (the more sensitive) Lake Prespa. From 6 ka δ18Ocalcite suggest progressive aridification, in agreement with many other records in the Mediterranean, although the uppermost sediments in one core records low δ18Ocalcite which we interpret as a result of human activity. Overall, the isotope data present here confirm that these two big lakes have captured the large scale, low frequency palaeoclimate variation that is seen in Mediterranean lakes, although in detail there is much palaeoclimate information that could be gained, especially small scale, high frequency differences between this region and the Mediterranean.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 39
    Publication Date: 2010-05-12
    Description: Despite the importance of fungi in soil ecosystem services, a theoretical framework that links soil management strategies with fungal ecology is still lacking. One of the key challenges is understanding how the complex geometrical shape of pores in soil affects fungal spread and species interaction. Progress in this area has long been hampered by a lack of experimental techniques for quantification. In this paper we use X-ray computed tomography to quantify and characterize the pore geometry at microscopic scales (30 μm) that are relevant for fungal spread in soil. We analysed the pore geometry for replicated samples with bulk-densities ranging from 1.2–1.6 g/cm3. The bulk-density of soils significantly affected the total volume, mean pore diameter and connectivity of the pore volume. A previously described fungal growth model comprising a minimal set of physiological processes required to produce a range of phenotypic responses was used to analyse the effect of these geometric descriptors on fungal invasion, and we showed that the degree and rate of fungal invasion was affected mainly by pore volume and pore connectivity. The presented experimental and theoretical framework is a significant first step towards understanding how environmental change and soil management impact on fungal diversity in soils.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 40
    Publication Date: 2010-05-20
    Description: Ancient Lake Ohrid is a steep sided, oligotrophic, karst lake of likely Pliocene age and often referred to as a hotspot of endemic biodiversity. This study aims on tracing significant lake level fluctuations at Lake Ohrid using high-resolution acoustic data in combination with lithological, geochemical, and chronological information from two sediment cores recovered from sub-aquatic terrace levels at ca. 32 and 55 m. According to our data, significant lake level fluctuations with prominent lowstands of ca. 60 and 35 m below the present water level occurred during MIS 6 and MIS 5, respectively. The effect of these lowstands on biodiversity in most coastal parts of the lake is negligible, due to only small changes in lake surface area, coastline, and habitat. In contrast, biodiversity in shallower areas was more severely affected due to disconnection of today sub-lacustrine springs from the main water body. Multichannel seismic data from deeper parts of the lake clearly imaged several clinoform structures stacked on top of each other. These stacked clinoforms indicate significantly lower lake levels prior to MIS 6 and a stepwise rise of water level with intermittent stillstands since its existence as water filled body, which might have caused enhanced expansion of endemic species within Lake Ohrid.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 41
    Publication Date: 2010-05-04
    Description: Potential mobilization and transport of Dissolved Organic Carbon (DOC) in subarctic river basins towards the oceans is enormous, because 23–48% of the worlds Soil Organic Carbon (SOC) is stored in northern regions. As climate changes, the amount and composition of DOC exported from these basins are expected to change. The transfer of organic carbon between soils and rivers results in fractionation of organic carbon compounds. The aim of this research is to determine the DOC concentrations, its fractions, i.e. humic (HA), fulvic (FA), and hydrophilic (HY) acids, and soil characteristics that influence the DOC sorptive properties of different soil types within a tundra and taiga catchment of Northern European Russia. DOC in taiga and tundra soil profiles (soil solution) consisted only of HY and FA, where HY became more abundant with increasing depth. Adsorption of DOC on mineral phases is the key geochemical process for release and removal of DOC from potentially soluble carbon pool. We found that adsorbed organic carbon may desorb easily and can release DOC quickly, without being dependent on mineralization and degradation. Although Extractable Organic Carbon (EOC) comprise only a small part of SOC, it is a significant buffering pool for DOC. We found that about 80–90% of released EOC was previously adsorbed. Fractionation of EOC is also influenced by the fact that predominantly HA and FA adsorbed to soil and therefore also are the main compounds released when desorbed. Flowpaths vary between taiga and tundra and through seasons, which likely affects DOC concentration found in streams. As climate changes, also flowpaths of water through soils may change, especially in tundra caused by thawing soils. Therefore, adsorptive properties of thawing soils exert a major control on DOC leaching to rivers. To better understand the process of DOC ad- and de-sorption in soils, process based soil chemical modelling, which could bring more insight in solution speciation, mineral solubility, and adsorption reactions, is appropriate.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 42
    Publication Date: 2010-05-03
    Description: Dissolved nitrous oxide (N2O) was measured in the waters of the Changjiang (Yangtze River) Estuary and its adjacent marine area during five surveys covering the period of 2002–2006. Dissolved N2O concentrations ranged from 6.04 to 21.3 nM, and indicate seasonal variations with high values occurring in summer and spring. Dissolved riverine N2O was observed monthly at station Xuliujing of the Changjiang, and ranged from 12.4 to 33.3 nM with an average of 20.8±7.8 nM. The average annual input of N2O from the Changjiang to the estuary and its adjacent area was estimated to be 15.8×106 mol/yr. N2O emission rates from the sediments of the Changjiang Estuary in spring ranged from −1.88 to 2.02 μmol m−2 d−1, which suggest that sediment can act as either a source or a sink of N2O in the Changjiang Estuary. The annual sea to air N2O fluxes from the Changjiang Estuary were estimated to be 6.8±3.7, 13.3±7.2 and 14.9±8.3 μmol m−2 d−1 using LM86, W92 and RC01 relationships, respectively. The annual sea to air N2O fluxes from the adjacent marine area were estimated to be 8.5±7.8, 15.3±13.5 and 17.4±15.7 μmol m−2 d−1 using LM86, W92 and RC01 relationship, respectively. Hence the Changjiang Estuary and its adjacent marine area is a net source of atmospheric N2O.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 43
    Publication Date: 2010-04-27
    Description: Nitrous oxide (N2O) is a trace gas that contributes to greenhouse warming of the atmosphere and stratospheric ozone depletion. The N2O yield from nitrification (moles N2O-N produced/mole ammonium-N consumed) has been used to estimate marine N2O production rates from measured nitrification rates and global estimates of oceanic export production. However, the N2O yield from nitrification is not constant. Previous culture-based measurements indicate that N2O yield increases as oxygen (O2) concentration decreases and as nitrite (NO2−) concentration increases. These results were obtained in substrate-rich conditions and may not reflect N2O production in the ocean. Here, we have measured yields of N2O from cultures of the marine β-proteobacterium Nitrosomonas marina C-113a as they grew on low-ammonium (50 μM) media. These yields were lower than previous reports, between 4×10−4 and 7×10−4 (moles N/mole N). The observed impact of O2 concentration on yield was also smaller than previously reported under all conditions except at high starting cell densities (1.5×10
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 44
    Publication Date: 2010-04-27
    Description: Quantifying the connectivity of pore networks is a key issue not only for modelling fluid flow and solute transport in porous media but also for assessing the ability of soil ecosystems to filter bacteria, viruses and any type of living microorganisms as well inert particles which pose a contamination risk. Straining is the main mechanical component of filtration processes: it is due to size effects, when a given soil retains a conveyed entity larger than the pores through which it is attempting to pass. We postulate that the range of sizes of entities which can be trapped inside soils has to be associated with the large range of scales involved in natural soil structures and that information on the pore size distribution has to be complemented by information on a Critical Filtration Size (CFS) delimiting the transition between percolating and non percolating regimes in multiscale pore networks. We show that the mass fractal dimensions which are classically used in soil science to quantify scaling laws in observed pore size distributions can also be used to build 3-D multiscale models of pore networks exhibiting such a critical transition. We extend to the 3-D case a new theoretical approach recently developed to address the connectivity of 2-D fractal networks (Bird and Perrier, 2009). Theoretical arguments based on renormalisation functions provide insight into multi-scale connectivity and a first estimation of CFS. Numerical experiments on 3-D prefractal media confirm the qualitative theory. These results open the way towards a new methodology to estimate soil filtration efficiency from the construction of soil structural models to be calibrated on available multiscale data.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 45
    Publication Date: 2010-05-05
    Description: The canopy height of forests is a key variable which can be obtained using air- or spaceborne remote sensing techniques such as radar interferometry or lidar. If new allometric relationships between canopy height and the biomass stored in the vegetation can be established this would offer the possibility for a global monitoring of the above-ground carbon content on land. In the absence of adequate field data we use simulation results of a tropical rain forest growth model to propose what degree of information might be generated from canopy height and thus to enable ground-truthing of potential future satellite observations. We here analyse the correlation between canopy height in a tropical rain forest with other structural characteristics, such as above-ground biomass (AGB) (and thus carbon content of vegetation) and leaf area index (LAI). The process-based forest growth model FORMIND2.0 was applied to simulate (a) undisturbed forest growth and (b) a wide range of possible disturbance regimes typically for local tree logging conditions for a tropical rain forest site on Borneo (Sabah, Malaysia) in South-East Asia. It is found that for undisturbed forest and a variety of disturbed forests situations AGB can be expressed as a power-law function of canopy height h (AGB=a·hb) with an r2~60% for a spatial resolution of 20 m×20 m (0.04 ha, also called plot size). The regression is becoming significant better for the hectare wide analysis of the disturbed forest sites (r2=91%). There seems to exist no functional dependency between LAI and canopy height, but there is also a linear correlation (r2~60%) between AGB and the area fraction in which the canopy is highly disturbed. A reasonable agreement of our results with observations is obtained from a comparison of the simulations with permanent sampling plot data from the same region and with the large-scale forest inventory in Lambir. We conclude that the spaceborne remote sensing techniques have the potential to quantify the carbon contained in the vegetation, although this calculation contains due to the heterogeneity of the forest landscape structural uncertainties which restrict future applications to spatial averages of about one hectare in size. The uncertainties in AGB for a given canopy height are here 20–40% (95% confidence level) corresponding to a standard deviation of less than ±10%. This uncertainty on the 1 ha-scale is much smaller than in the analysis of 0.04 ha-scale data. At this small scale (0.04 ha) AGB can only be calculated out of canopy height with an uncertainty which is at least of the magnitude of the signal itself due to the natural spatial heterogeneity of these forests.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 46
    Publication Date: 2010-04-26
    Description: Recent suggestions to slow down the increase in atmospheric carbon dioxide have included ocean fertilization by addition of the micronutrient iron to Southern Ocean surface waters, where a number of natural and artificial iron fertilization experiments have shown that low ambient iron concentrations limit phytoplankton growth. Using a coupled carbon-climate model with the marine biology's response to iron addition calibrated against data from natural iron fertilization experiments, we examine biogeochemical side effects of a hypothetical large-scale Southern Ocean Iron Fertilization (OIF) that need to be considered when attempting to account for possible OIF-induced carbon offsets. In agreement with earlier studies our model simulates an OIF-induced increase in local air-sea CO2 fluxes by about 60 GtC over a 100-year period, which amounts to about 40% of the OIF-induced increase in organic carbon export. Offsetting CO2 return fluxes outside the region and after stopping the fertilization at 1, 7, 10, 50, and 100 years are quantified for a typical accounting period of 100 years. For continuous Southern Ocean iron fertilization, the return flux outside the fertilized area cancels about 8% of the fertilization-induced CO2 air-sea flux within the fertilized area on a 100-yr timescale. This "leakage" effect has a similar radiative impact as the simulated enhancement of marine N2O emissions. Other side effects not yet discussed in terms of accounting schemes include a decrease in Southern Ocean oxygen levels and a simultaneous shrinking of tropical suboxic areas, and accelerated ocean acidification in the entire water column in the Southern Ocean on the expense of reduced globally averaged surface water acidification. A prudent approach to account for the OIF-induced carbon sequestration would account for global air-sea CO2 fluxes rather than for local fluxes into the fertilized area only. However, according to our model, this would underestimate the potential for offsetting CO2 emissions by about 20% on a 100 year accounting timescale. We suggest that a fair accounting scheme applicable to both terrestrial and marine carbon sequestration has to be based on emission offsets rather than on changes in individual carbon pools.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 47
    Publication Date: 2010-04-21
    Description: Continental-scale estimations of terrestrial methane (CH4) and nitrous oxide (N2O) fluxes over a long time period are crucial to accurately assess the global balance of greenhouse gases and enhance our understanding and prediction of global climate change and terrestrial ecosystem feedbacks. Using a process-based global biogeochemical model, the Dynamic Land Ecosystem Model (DLEM), we quantified simultaneously CH4 and N2O fluxes in North America's terrestrial ecosystems from 1979 to 2008. During the past 30 years, approximately 14.69±1.64 T g C a−1 (1 T g=1012 g) of CH4, and 1.94±0.16 T g N a−1 of N2O were released from terrestrial ecosystems in North America. At the country level, both the United States and Canada acted as CH4 sources to the atmosphere, but Mexico mainly oxidized and consumed CH4 from the atmosphere. Wetlands in North America contributed predominantly to the regional CH4 source, while all other ecosystems acted as sinks for atmospheric CH4, of which forests accounted for 36.8%. Regarding N2O emission in North America, the United States, Canada, and Mexico contributed 56.19%, 18.23%, and 25.58%, respectively, to the continental source over the past 30 years. Forests and croplands were the two ecosystems that contributed most to continental N2O emission. The inter-annual variations of CH4 and N2O fluxes in North America were mainly attributed to year-to-year climatic variability. While only annual precipitation was found to have a significant effect on annual CH4 flux, both mean annual temperature and annual precipitation were significantly correlated to annual N2O flux. The regional estimates and spatiotemporal patterns of terrestrial ecosystem CH4 and N2O fluxes in North America generated in this study provide useful information for global change research and policy making.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 48
    Publication Date: 2010-05-03
    Description: The sea-surface microlayer (SML) is located within the boundary between the atmosphere and hydrosphere. The high spatial and temporal variability of the SML's properties, however, have hindered a clear understanding of interactions between biotic and abiotic parameters at or across the air-water interface. Among the factors changing the physical and chemical environment of the SML, wind speed is an important one. In order to examine the temporal effects of minimized wind influence, SML samples were obtained from the southern Baltic Sea and from mesocosm experiments in a marina to study naturally and artificially calmed sea surfaces. Organic matter concentrations as well as abundance, 3H-thymidine incorporation, and the community composition of bacteria in the SML (bacterioneuston) compared to the underlying bulk water (ULW) were analyzed. In all SML samples, dissolved organic carbon and nitrogen were only slightly enriched and showed low temporal variability, whereas particulate organic carbon and nitrogen were generally greatly enriched and highly variable. This was especially pronounced in a dense surface film (slick) that developed during calm weather conditions as well as in the artificially calmed mesocosms. Overall, bacterioneuston abundance and productivity correlated with changing concentrations of particulate organic matter. Moreover, changes in the community composition in the field study were stronger in the particle-attached than in the non-attached bacterioneuston. This implies that decreasing wind enhances the importance of particle-attached assemblages and finally induces a succession of the bacterial community in the SML. Eventually, under very calm meteorological conditions, there is an uncoupling of the bacterioneuston from the ULW.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 49
    Publication Date: 2010-04-16
    Description: Soil dust deposition is recognized as a major source of iron to the open ocean at global and regional scales. However, the processes that control the speciation and cycle of iron in the surface ocean after dust deposition are poorly documented mainly due to the logistical difficulties to investigate in-situ, natural dust events. The development of clean mesocosms in the frame of the DUNE project (a DUst experiment in a low Nutrient low chlorophyll Ecosystem) was a unique opportunity to investigate these processes at the unexplored scale of one dust deposition event. During the DUNE1 mesocosm seeding experiment, iron stocks (dissolved and particulate concentrations in the water column) and fluxes (export of particulate iron in sediment traps) were followed during 8 days after an artificial dust seeding mimicking a wet deposition of 10 g m−2. The addition of dust at the surface of the mesocosms was immediately followed by a decrease of dissolved iron [dFe] concentration in the 0–10 m water column. This decrease was likely due to dFe scavenging on settling dust particles and mineral organic aggregates. The scavenging ratio of dissolved iron on dust particles averaged 0.37 ± 0.12 nmol mg−1. Batch dissolution experiments conducted in parallel to the mesocosm experiment showed a increase (up to 600%) in dust iron dissolution capacity in dust-fertilized waters compared to control conditions. This study gives evidences of complex and unexpected effects of dust deposition on surface ocean biogeochemistry: (1) large dust deposition events may be a sink for surface ocean dissolved iron and (2) successive dust deposition events may induce different biogeochemical responses in the surface ocean.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 50
    Publication Date: 2010-05-12
    Description: Degradation of tropical peats is a global concern due to large Carbon emission and loss of biodiversity. The degradation of tropical peats usually starts when the government clears closed peat forests into open and drained peatlands for agricultural uses. Tropical peats have high values of Water Contents (WC), Organic Matters (OM) and Total Organic Carbon (TOC), and low values of Total Nitrogen (TN) and Total Sulphur (TS). Dry Bulk Density (DBD) is commonly less than 0.1 g cm−3. Decline of concentration values of OM (
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 51
    Publication Date: 2010-04-28
    Description: Megafaunal organisms play a key role in the deep-sea ecosystem functioning. At 3500 m depth in the Nazaré Canyon, NE Atlantic, very high abundances of the infaunal holothurian Molpadia musculus were found. Sediment samples and holothurians were collected by ROV and experiments were conducted in situ in incubation chambers. The biochemical composition of the sediment (in terms of proteins, carbohydrates and lipids), the holothurians' gut contents and holothurians' faecal material were analysed. In the sediments, proteins were the dominant organic compound, followed by carbohydrates and lipids. In the holothurian gut contents, conversely, protein concentrations were higher than the other compounds and decreased significantly as the material passed through the digestive tract. About 33±1% of the proteins were digested already in the mid gut, with a final digestion rate equal to 67±1%. Carbohydrates and lipids were ingested in smaller amounts and digested with lower efficiencies (23±11% and 50±11%, respectively). As a result, biopolymeric C digestion rate was on average 62±3%. We also calculated that the entire holothurians' population could remove from the sediment about 0.49±0.13 g biopolymeric C and 0.13±0.03 g N m−2 d−1. These results suggest that the M. musculus plays a key role in the benthic tropho-dynamics and biogeochemical processes of the Nazaré Canyon.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 52
    Publication Date: 2010-05-06
    Description: The potential impact of rising carbon dioxide (CO2) on carbon fluxes in natural plankton communities was investigated during the 2005 PeECE III mesocosm study in Bergen, Norway. Triplicate mesocosms, in which a phytoplankton bloom was induced by nutrient addition, were incubated with 1×(~350 μatm), 2×(~700 μatm), and 3× present day CO2(~1050 μatm) levels for 3 weeks. 13C labeled bicarbonate was added to all mesocosms to follow the transfer of carbon from dissolved inorganic carbon (DIC) into phytoplankton and subsequently heterotrophic bacteria, zooplankton, and settling particles. Isotope ratios of polar lipid fatty acids (PLFA) were used to infer the biomass and production of phytoplankton and bacteria. Phytoplankton PLFA were enriched within one day after label addition, while it took another 3 days before bacteria showed substantial enrichment. Group-specific primary production measurements revealed that coccolithophores grew faster than green algae and diatoms. Elevated CO2 had a significant positive effect on post-bloom biomass of green algae, diatoms, and bacteria. A simple model based on measured isotope ratios of phytoplankton and bacteria revealed that CO2 had no significant effect on the carbon transfer efficiency from phytoplankton to bacteria. There was no indication of enhanced settling based on isotope mixing models during the phytoplankton bloom. Our results suggest that CO2 effects are most pronounced in the post-bloom phase, under nutrient limitation.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 53
    Publication Date: 2010-04-12
    Description: Intense Saharan dust deposition occurs over large oligotrophic areas in the Mediterranean Sea and the Tropical Atlantic and its impact on the biogeochemical functioning of such oligotrophic ecosystems needs to be understood. However, due to the logistical difficulties to investigate in-situ natural dust events and due to the inherent limitations of microcosm laboratory experiments, new experimental approaches need to be developed. In this paper, we present a new experimental set up based on large clean mesocoms deployed in the frame of the DUNE (a DUst experiment in a low-Nutrient, low-chlorophyll Ecosystem) project. We demonstrate that these tools are highly relevant and provide a powerful new strategy to in situ study the response of an oligotrophic ecosystem to chemical forcing by atmospheric deposition of African dust. First, we describe how to cope with the large amount of dust aerosol needed to conduct the seeding experiments, by producing an analogue from soil collection in a source area and performing subsequent appropriate physico-chemical treatment in the laboratory including an eventual processing by simulated cloud water. The comparison of physico-chemical characteristics of produced dust analogues with the literature confirms that our experimental simulations are representative of dust, ageing during atmospheric transport, and subsequent deposition to the Mediterranean. Second, we demonstrate the feasibility in coastal area to installing in situ, a series of large (6×52 m3) mesocosms without perturbing the local ecosystem. All the setup, containing no metallic part and with as less as possible induced perturbation during the sampling sequence, allows working with the required conditions for biogeochemical studies in oligotrophic environments where nutrient and micronutrients are at nano- or subnano-molar levels. Two distinct "seeding experiments" were conducted by deploying mesocosms in triplicates: three mesocosms serving as controls (CONTROLS-Meso = no addition) and three mesocosms being seeded with the same amount of Saharan dust (DUST-Meso = 10 g m2 of sprayed dust). A large panel of biogeochemical parameters was measured at 0.1 m, at 5 m and 10 m in all the mesocosms and at a selected site outside the mesocosms, before the seeding and at regular intervals after. Statistical analyses of the results show that data from triplicate mesocosms are highly reproducible (variability
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 54
    Publication Date: 2010-04-09
    Description: To evaluate how mangrove invasion and removal can modify benthic carbon cycling processes and ecosystem functioning, we used stable-isotopically labelled algae as a deliberate tracer to quantify benthic respiration and C-flow through macrofauna and bacteria in sediments collected from (1) an invasive mangrove forest, (2) deforested mangrove sites 2 and 6 years after removal of above-sediment mangrove biomass, and (3) two mangrove-free, control sites in the Hawaiian coastal zone. Sediment oxygen consumption (SOC) rates were significantly greater in the mangrove and mangrove removal site experiments than in controls and were significantly correlated with total benthic (macrofauna and bacteria) biomass and sedimentary mangrove biomass (SMB). Bacteria dominated short-term C-processing of added microalgal-C and benthic biomass in sediments from the invasive mangrove forest habitat. In contrast, macrofauna were the most important agents in the short-term processing of microalgal-C in sediments from the mangrove removal and control sites. Mean faunal abundance and short term C-uptake rates in sediments from both removal sites were significantly higher than in control cores, which collectively suggest that community structure and short-term C-cycling dynamics in habitats where mangroves have been cleared can remain fundamentally different from un-invaded mudflat sediments for at least 6-yrs following above-sediment mangrove removal. In summary, invasion by mangroves can lead to large shifts in benthic ecosystem function, with sediment metabolism, benthic community structure and short-term C-remineralization dynamics being affected for years following invader removal.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 55
    Publication Date: 2010-04-22
    Description: Organic matter in surface sediments from the upper reach of the Pearl River Estuary and Lingdingyang Bay, as well as the adjacent northern South China Sea shelf was characterized by a variety of techniques, including elemental (C and N), stable carbon isotopic (δ 13C) composition, as well as molecular-level analyses. Total organic carbon (TOC) content was 1.61±1.20% in the upper reach down to 1.00±0.22% in Lingdingyang Bay and to 0.80±0.10% on the inner shelf and 0.58±0.06% on the outer shelf. δ13C values ranged from −25.11‰ to −21.28‰ across the studied area, with a trend of enrichment seaward. The spatial trend in C/N ratios mirrored that of δ13C, with a substantial decrease in C/N ratio from 10.9±1.3 in the Lingdingyang Bay surface sediments to 6.5±0.09 in the outer shelf surface sediments. Total carbohydrate yields ranged from 22.1 to 26.7 mg (100 mg OC)−1, and typically followed TOC concentrations in the estuarine and shelf sediments, suggesting that the relative abundance of total carbohydrate was fairly constant in TOC. Total neutral sugars as detected by the nine major monosaccharides (lyxose, rhamnose, ribose, arabinose, fucose, xylose, galactose, mannose, and glucose) yielded between 4.0 and 18.6 mg (100 mg OC)−1 in the same sediments, suggesting that a significant amount of carbohydrates were not neutral aldoses. The bulk organic matter properties, isotopic composition and C/N ratios, combined with molecular-level carbohydrate compositions were used to assess the sources and accumulation of terrestrial organic matter in the Pearl River Estuary and the adjacent northern South China Sea shelf. Results showed a mixture of terrestrial riverine organic carbon with in situ phytoplankton organic carbon in the areas studied. Using a two end-member mixing model based on δ13C values and C/N ratios, we estimated that the terrestrial organic carbon contribution to the surface sediment TOC was ca. 57±13% for Lingdingyang Bay, 19±2% for the inner shelf, which decreased further to 4.3±0.5% on the outer shelf. The molecular composition of the carbohydrate in surface sediments also suggested that the inner estuary was rich in terrestrial-derived carbohydrates but that the contribution of terrestrial-derived carbohydrates decreased offshore. Terrestrial organic carbon accumulation flux was estimated as 1.37±0.92×1011 g yr−1 in Lingdingyang Bay, which accounted for 37±25% of the terrestrial organic carbon transported to the Bay. The burial efficiency of terrestrial organic matter was markedly lower than that of suspended particulate substance (~71%) suggesting that the riverine POC undergoes significant degradation and replacement during transportation through the estuary.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 56
    Publication Date: 2010-04-16
    Description: For at least the past several decades, North Carolina's Neuse River Estuary (NRE) has been subject to water quality problems relating to increased eutrophication. Research studies initiated in the past several years have addressed the complex nutrient cycles in this system. Most of this research, however, is concerned with the nutrient processes of the water column and the passive diffusion processes of the benthic sedimentary environment. Resuspension of bottom sediments, by bioturbation, tides, or wind-generated waves, may have a significant effect on the flux of nutrients in an estuarine system These processes can result in the advective transport of sediment porewater, rich with nitrogen, phosphorus and carbon, into the water column. Thus, estimates of nutrient and carbon inputs from the sediments may be too low. This study focused on the potential change in porewater and bottom water nutrient concentrations associated with measured resuspension events. Previous research used short-lived radionuclides and meteorological data to characterize the sediment dynamics of the benthic system of the estuary. These techniques in conjunction with the presented porewater inventories allowed evaluation of the depth to which sediments have been disturbed and the advective flux of nutrients to the water column. The largest removal episode occurred in the lower NRE as the result of a wind event and was estimated that the top 2.2 cm of sediment and corresponding porewater were removed. NH4+ advective flux (resuspended) was 2 to 6 times greater than simply diffusion. Phosphate fluxes were estimated to be 15 times greater than the benthic diffusive flux. Bottom water conditions with elevated NH4+ and PO43− indicate that nutrients stored in the sediments continue to play an important role in overall water quality and this study suggests that the advective flux of nutrients to the water column is critical to understand estuarine nutrient cycling.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 57
    Publication Date: 2010-04-29
    Description: Dynamic Vegetation Models (DVMs) simulate energy, water and carbon fluxes between the ecosystem and the atmosphere, between the vegetation and the soil, and between plant organs. They also estimate the potential biomass of a forest in equilibrium having grown under a given climate and atmospheric CO2 level. In this study, we evaluate the above ground woody biomass (AGWB) and the above ground woody Net Primary Productivity (NPPAGW) simulated by the DVM ORCHIDEE across Amazonian forests, by comparing the simulation results to a large set of ground measurements (220 sites for biomass, 104 sites for NPPAGW). We found that the NPPAGW is on average overestimated by 63%. We also found that the fraction of biomass that is lost through mortality is 85% too high. These model biases nearly compensate each other to give an average simulated AGWB close to the ground measurement average. Nevertheless, the simulated AGWB spatial distribution differs significantly from the observations. Then, we analyse the discrepancies in biomass with regards to discrepancies in NPPAGW and those in the rate of mortality. When we correct for the error in NPPAGW, the errors on the spatial variations in AGWB are exacerbated, showing clearly that a large part of the misrepresentation of biomass comes from a wrong modelling of mortality processes. Previous studies showed that Amazonian forests with high productivity have a higher mortality rate than forests with lower productivity. We introduce this relationship, which results in strongly improved modelling of biomass and of its spatial variations. We discuss the possibility of modifying the mortality modelling in ORCHIDEE, and the opportunity to improve forest productivity modelling through the integration of biomass measurements, in particular from remote sensing.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 58
    Publication Date: 2010-04-08
    Description: Multi-criteria Decision Analysis (MCDA) is concerned with identifying the values, uncertainties and other issues relevant in a given decision, its rationality, and the resulting optimal decision. These decisions are difficult because the complexity of the system or because of determining the optimal situation or behavior. This work will illustrate how MCDA is applied in practice to a complex problem to resolve such us soil erosion and degradation. Desertification is a global problem and recently it has been studied in several forums as ONU that literally says: "Desertification has a very high incidence in the environmental and food security, socioeconomic stability and world sustained development". Desertification is the soil quality loss and one of FAO's most important preoccupations as hunger in the world is increasing. Multiple factors are involved of diverse nature related to: natural phenomena (water and wind erosion), human activities linked to soil and water management, and others not related to the former. In the whole world this problem exists, but its effects and solutions are different. It is necessary to take into account economical, environmental, cultural and sociological criteria. A multi-criteria model to select among different alternatives to prepare an integral plan to ameliorate or/and solve this problem in each area has been elaborated taking in account eight criteria and six alternatives. Six sub zones have been established following previous studies and in each one the initial matrix and weights have been defined to apply on different criteria. Three Multicriteria Decision Methods have been used for the different sub zones: ELECTRE, PROMETHEE and AHP. The results show a high level of consistency among the three different multicriteria methods despite the complexity of the system studied. The methods are described for La Estrella sub zone, indicating election of weights, Initial Matrixes, the MATHCAD8 algorithms used for PROMETHEE, and the Graph of Expert Choice showing the results of AHP. A brief schema of the actions recommended for each of the six different sub zones is reported in Conclusions, with "We can combine Autochthonous and High Value Forest" for La Estrella.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 59
    Publication Date: 2010-03-29
    Description: Soil is an important store of carbon (C) and there has been recent concern that accelerated loss of carbon from the soil may be reinforcing climate change. There is therefore a need to both track current trends in soil C storage and to identify how soil can contribute to carbon emission reduction targets. Countryside Survey (CS) is an integrated national monitoring program in which vegetation, topsoil, water and land use measurements are made across Great Britain (GB). The soil component of CS is unique as topsoil C concentrations have been measured at three time points (1978, 1998 and 2007) together with topsoil bulk density (2007 only), vegetation composition (all years), and land use (i.e. Broad Habitat, 1998, 2007). The combined dataset allows estimates of change in topsoil C stock over time and the influence of land use change on topsoil C to be investigated. Results indicate that although there was a small increase (8%) in topsoil C concentration between 1978 and 1998 and small decrease (6.5%) between 1998 and 2007, there was no significant change in GB topsoil C concentration (in g kg−1), density (in t ha−1) or stock (in Tg) between 1978 and 2007. Within individual habitats some consistent trends were observed and by examining plots which had consistent vegetation composition since 1978 we demonstrate that land use change was not responsible for the few significant changes that were found. These results are comparable with the few other estimates of recent topsoil C concentration and stock changes in W. Europe, with the exception of a previous study in England and Wales which reported significant topsoil C losses of up to 50% over a similar period. Possible reasons for the contradictory findings are discussed. An extra 220–730 Tg of C would be stored in topsoil C stocks if all GB soils were optimised at the top 5–25% C densities as recorded for each habitat in 2007.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 60
    Publication Date: 2010-04-01
    Description: We designed generalized simplified models using machine learning algorithms (ML) to assess denitrification at the catchment scale. In particular, we designed an artificial neural network (ANN) to simulate total nitrogen emissions from the denitrification process. Boosted regression trees (BRT, another ML) was also used to analyse the relationships and the relative influences of different input variables towards total denitrification. To calibrate the ANN and BRT models, we used a large database obtained by collating datasets from the literature. We developed a simple methodology to give confidence intervals for the calibration and validation process. Both ML algorithms clearly outperformed a commonly used simplified model of nitrogen emissions, NEMIS. NEMIS is based on denitrification potential, temperature, soil water content and nitrate concentration. The ML models used soil organic matter % in place of a denitrification potential and pH as a fifth input variable. The BRT analysis reaffirms the importance of temperature, soil water content and nitrate concentration. Generality of the ANN model may also be improved if pH is used to differentiate between soil types. Further improvements in model performance can be achieved by lessening dataset effects.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 61
    Publication Date: 2010-04-08
    Description: The El Niño Southern Oscillation (ENSO) drives important changes in the marine productivity of the Equatorial Pacific, in particular during major El Niño/La Niña transitions. Changes in environmental conditions associated with these climatic events also likely impact phytoplankton composition. In this work, the distribution of four major phytoplankton groups (nanoeucaryotes, Prochlorococcus, Synechococcus, and diatoms) was examined between 1996 and 2007 by applying the PHYSAT algorithm to the ocean color data archive from the Ocean Color and Temperature Sensor (OCTS) and Sea-viewing Wide Field-of-view Sensor (SeaWiFS). Coincident with the decrease in chlorophyll concentrations, a large-scale shift in the phytoplankton composition of the Equatorial Pacific, that was characterized by a decrease in Synechococcus and an increase in nanoeucaryotes dominance, was observed during the early stages of both the strong El Niño of 1997 and the moderate El Niño of 2006. A significant increase in diatoms dominance was observed in the Equatorial Pacific during the 1998 La Niña and was associated with elevated marine productivity. An analysis of the environmental variables using a coupled physical-biogeochemical model (NEMO-PISCES) suggests that the Synechococcus dominance decrease during the two El Niño events was associated with an abrupt decline in nutrient availability (−0.9 to −2.5 μM NO3 month−1). Alternatively, increased nutrient availability (3 μM NO3 month−1) during the 1998 La Niña resulted in Equatorial Pacific dominance diatom increase. Despite these phytoplankton community shifts, the mean composition is restored after a few months, which suggests resilience in community structure. Such rapid changes to the composition of phytoplankton groups should be considered in future modeling approaches to represent variability of the marine productivity in the Equatorial Pacific and to quantify its potential implications on food-web and on global carbon cycle.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 62
    Publication Date: 2010-03-26
    Description: Recent studies indicate strengthened trade winds and intensified upwelling in the tropical Pacific since the late 1990s, suggesting implications for the biogeochemical processes. We employed a fully coupled physical-biogeochemical model to test the hypothesis that there were climate driven decadal variations in biogeochemical fields of the equatorial Pacific. We quantified changes in nitrate and iron concentrations, primary and secondary productions, and phytoplankton and zooplankton biomass between 1988–1996 and 1999–2007. Our modeling simulation showed that the intensified upwelling during 1999–2007 resulted in significant increases of nitrate and iron concentrations in the mixed layer of the central equatorial Pacific. In addition, the upwelling front moved westward, causing shifts of oligotrophic conditions to mesotrophic conditions in some parts of the western equatorial Pacific. As a result, there was an overall enhancement of biological activity in the western and central equatorial Pacific, leading to an increase in primary production and secondary production by 10–15% and 15–50%, respectively. Our study also indicated that there were changes in ecosystem states in the equatorial Pacific Ocean, suggesting alternative new states with more zooplankton biomass during 1999–2007. Additionally, our study showed significant changes in seasonal variations of biogeochemical fields. Particularly, there was a much stronger seasonality in biological production and plankton biomass near the dateline during 1999–2007 relative to 1988–1996.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 63
    Publication Date: 2010-04-07
    Description: The deep sea, the largest biome on Earth, has a series of characteristics that make this environment both distinct from other marine and land ecosystems and unique for the entire planet. This review describes these patterns and processes, from geological settings to biological processes, biodiversity and biogeographical patterns. It concludes with a brief discussion of current threats from anthropogenic activities to deep-sea habitats and their fauna. Investigations of deep-sea habitats and their fauna began in the late 19th Century. In the intervening years, technological developments and stimulating discoveries have promoted deep-sea research and changed our way of understanding life on the planet. Nevertheless, the deep sea is still mostly unknown and current discovery rates of both habitats and species remain high. The geological, physical and geochemical settings of the deep-sea floor and the water column form a series of different habitats with unique characteristics that support specific faunal communities. Since 1840, 27 new habitats/ecosystems have been discovered from the shelf break to the deep trenches and discoveries of new habitats are still happening in the early 21st Century. However, for most of these habitats, the global area covered is unknown or has been only very roughly estimated; an even smaller – indeed, minimal – proportion has actually been sampled and investigated. We currently perceive most of the deep-sea ecosystems as heterotrophic, depending ultimately on the flux on organic matter produced in the overlying surface ocean through photosynthesis. The resulting strong food limitation, thus, shapes deep-sea biota and communities, with exceptions only in reducing ecosystems such as inter alia hydrothermal vents or cold seeps, where chemoautolithotrophic bacteria play the role of primary producers fuelled by chemical energy sources rather than sunlight. Other ecosystems, such as seamounts, canyons or cold-water corals have an increased productivity through specific physical processes, such as topographic modification of currents and enhanced transport of particles and detrital matter. Because of its unique abiotic attributes, the deep sea hosts a specialized fauna. Although there are no phyla unique to deep waters, at lower taxonomic levels the composition of the fauna is distinct from that found in the upper ocean. Amongst other characteristic patterns, deep-sea species may exhibit either gigantism or dwarfism, related to the decrease in food availability with depth. Food limitation on the seafloor and water column is also reflected in the trophic structure of deep-sea communities, which are adapted to low energy availability. In most of the heterotrophic deep-sea settings, the dominant megafauna is composed of detritivores, while filter feeders are abundant in habitats with hard substrata (e.g. mid-ocean ridges, seamounts, canyon walls and coral reefs) and chemoautotrophy through symbiotic relationships is dominant in reducing habitats. Deep-sea biodiversity is among of the highest on the planet, mainly composed of macro and meiofauna, with high evenness. This is true for most of the continental margins and abyssal plains with hot spots of diversity such as seamounts or cold-water corals. However, in some ecosystems with particularly "extreme" physicochemical processes (e.g. hydrothermal vents), biodiversity is low but abundance and biomass are high and the communities are dominated by a few species. Two large-scale diversity patterns have been discussed for deep-sea benthic communities. First, a unimodal relationship between diversity and depth is observed, with a peak at intermediate depths (2000–3000 m), although this is not universal and particular abiotic processes can modify the trend. Secondly, a poleward trend of decreasing diversity has been discussed, but this remains controversial and studies with larger and more robust datasets are needed. Because of the paucity in our knowledge of habitat coverage and species composition, biogeographic studies are mostly based on regional data or on specific taxonomic groups. Recently, global biogeographic provinces for the pelagic and benthic deep ocean have been described, using environmental and, where data were available, taxonomic information. This classification described 30 pelagic provinces and 38 benthic provinces divided into 4 depth ranges, as well as 10 hydrothermal vent provinces. One of the major issues faced by deep-sea biodiversity and biogeographical studies is related to the high number of species new to science that are collected regularly, together with the slow description rates for these new species. Taxonomic coordination at the global scale is particularly difficult but is essential if we are to analyse large diversity and biogeographic trends. Because of their remoteness, anthropogenic impacts on deep-sea ecosystems have not been addressed very thoroughly until recently. The depletion of biological and mineral resources on land and in shallow waters, coupled with technological developments, is promoting the increased interest in services provided by deep-water resources. Although often largely unknown, evidence for the effects of human activities in deep-water ecosystems – such as deep-sea mining, hydrocarbon exploration and exploitation, fishing, dumping and littering – is already accumulating. Because of our limited knowledge of deep-sea biodiversity and ecosystem functioning and because of the specific life-history adaptations of many deep-sea species (e.g. slow growth and delayed maturity), it is essential that the scientific community works closely with industry, conservation organisations and policy makers to develop conservation and management options.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 64
    Publication Date: 2010-02-22
    Description: Winter measurements of soil CO2 effluxes are few because such measurements are difficult when the ground is snow-covered, limiting the ability of chamber systems to characterize soil CO2 effluxes accurately year-round. In this study, we used two systems for continuous measurements of soil CO2 effluxes in a larch forest in northern Japan: (1) a 16-channel automated soil chamber system with eight chambers for measuring soil CO2 efflux and eight chambers for measuring heterotrophic respiration during snow-free periods, and (2) a soil CO2 concentration gradient system used year-round, including when the ground was snow-covered. During the warm season, the gradient approach yielded systematically higher CO2 effluxes than the automated chamber technique, whereas it yielded lower CO2 effluxes during the cold season. As a result of this bias (p
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 65
    Publication Date: 2010-02-12
    Description: A simple prognostic tool for gas hydrate (GH) quantification in marine sediments is presented based on a diagenetic transport-reaction model approach. One of the most crucial factors for the application of diagenetic models is the accurate formulation of microbial degradation rates of particulate organic carbon (POC) and the coupled biogenic CH4 formation. Wallmann et al. (2006) suggested a kinetic formulation considering the ageing effects of POC and accumulation of reaction products (CH4, CO2) in the pore water. This model is applied to data sets of several ODP sites in order to test its general validity. Based on a thorough parameter analysis considering a wide range of environmental conditions, the POC accumulation rate (POCar in g/cm2/yr) and the thickness of the gas hydrate stability zone (GHSZ in m) were identified as the most important and independent controls for biogenic GH formation. Hence, depth-integrated GH inventories in marine sediments (GHI in g of CH4 per cm2 seafloor area) can be estimated as: GHI = a · POCar · GHSZb · exp (−GHSZc/POCar/d) + e with a = 0.00214, b = 1.234, c = −3.339, d = 0.3148, e = −10.265. Several tests indicate that the transfer function gives a realistic approximation of the minimum potential GH inventory of low gas flux (LGF) systems. The overall advantage of the presented function is its simplicity compared to complex numerical models: only two easily accessible parameters are needed.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 66
    Publication Date: 2010-02-03
    Description: The size-normalised weight (SNW) of planktic foraminifera, a measure of test wall thickness and density, is potentially a valuable palaeo-proxy for marine carbon chemistry. As increasing attention is given to developing this proxy it is important that methods are comparable between studies. Here, we compare SNW data generated using two different methods to account for variability in test size, namely i) the narrow (50 μm range) sieve fraction method and ii) the individually measured test size method. Using specimens from the 200–250 μm sieve fraction range collected in multinet samples from the North Atlantic, we find that sieving does not constrain size sufficiently well to isolate changes in weight driven by variations in test wall thickness and density from those driven by size. We estimate that these SNW data are associated with an uncertainty, or error bar, of about ±11%. Errors associated with the narrow sieve fraction method may be reduced by decreasing the size of the sieve window, by using larger tests and by increasing the number tests employed. In situations where numerous large tests are unavailable, however, substantial errors associated with this sieve method remain unavoidable. In such circumstances the individually measured test size method provides a better means for estimating SNW because, as our results show, this method isolates changes in weight driven by variations in test wall thickness and density from those driven by size.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 67
    Publication Date: 2010-02-02
    Description: Emissions of several volatile organic compounds (VOCs) from dry leaf litter at temperatures in the range 20–100 °C are reported for different plant species. The emission rates of ethane, ethene, propane, propene, n-pentane and methyl chloride increase exponentially with temperature and follow the Arrhenius relation. Emission rates up to 650 ng/gdw/h were observed for hydrocarbons at 70 °C, while for methyl chloride emission rates up to 18 μg/gdw/h were observed at this temperature. The emissions are of abiotic origin, which is indicated by activation energies higher than 50 kJ/mol. The emission of VOCs from dry leaf litter decreases in time, due to depletion of the precursor reservoirs. At low temperatures (20–30 °C) the decrease is very slow, but at higher temperatures (80–100 °C) it is noticeable on a timescale of hours. Our results show that hydrocarbons can be produced in the leaf, but the production requires oxygen. Emissions of methyl chloride from dry leaves can be significant for the global budget of methyl chloride.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 68
    Publication Date: 2010-02-02
    Description: The areal exposure of continental shelves during glacial sea level lowering enhanced the transfer of erodible reactive organic matter to the open ocean. Sea level fall also activated submarine canyons thereby allowing large rivers to deposit their particulate load, via gravity flows, directly in the deep-sea. Here, we analyze the effects of shelf erosion and particulate matter re-routing to the open ocean during interglacial to glacial transitions, using a coupled model of the marine phosphorus, organic carbon and oxygen cycles. The results indicate that shelf erosion and submarine canyon formation may significantly lower deep sea oxygen levels, by up to 25%, during sea level low stands, mainly due to the supply of new material from the shelves, and to a lesser extent due to particulate organic matter bypassing the coastal zone. Our simulations imply that deep-sea oxygen levels can drop significantly if eroded shelf material is deposited to the seafloor. Thus the glacial ocean's oxygen content could have been significantly lower than during interglacial stages. Primary production, organic carbon burial and dissolved phosphorus inventories are all affected by the erosion and rerouting mechanisms. However, re-routing of the continental and eroded shelf material to the deep sea-sea has the effect of decoupling deep-sea oxygen demand from primary productivity in the open ocean. P burial is also not affected showing a disconnection between the biogeochemical cycles in the water column and the P burial record.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 69
    Publication Date: 2010-02-02
    Description: Paddy soils support important croplands in many parts of the world, especially in Asia. A thorough understanding of nitrogen (N) in Chinese paddy soils would be helpful to comprehend N cycling on farms from a national perspective. The N storage and density of paddy soils in China were evaluated employing 1490 soil profiles and a map of Chinese soils at a scale of 1:1 000 000. Results showed that the mean N density of paddy soils at 0–100 cm was 1240.0 g/m3, with N storage of 569.0 Tg. Paddy soil N density varies with different soil-water regime. In fact, waterlogged conditions can enhance paddy soil N content. Different rotation systems and various fallow systems also can affect paddy soil N density. There are significant relationships of N between both SOC and sand content. But the sensitivity of paddy soil N to climate was weak because of human activity. While this GIS-based analysis is a relatively coarse evaluation of the database, it does provide the first quantitative assessment of paddy soils N storage across China using commonly available digital databases.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 70
    Publication Date: 2010-02-01
    Description: Using the 15N2 tracer method and high-sensitivity δ15N analytical systems, we determined N2 fixation rates by dividing fractions into particulate organic nitrogen (PON: 〉0.7 μm) and dissolved organic nitrogen (DON:
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 71
    Publication Date: 2010-02-01
    Description: This paper assesses how considering variation in DOC availability and cell maintenance in bacterial models affects Bacterial Growth Efficiency (BGE) estimations. For this purpose, we conducted two biodegradation experiments simultaneously. In experiment one, a given amount of substrate was added to the culture at the start of the experiment whilst in experiment two, the same amount of substrate was added, but using periodic pulses over the time course of the experiment. Three bacterial models, with different levels of complexity, (the Monod, Marr-Pirt and the dynamic energy budget (DEB) model), were used, and calibrated using the above experiments. BGE has been estimated using the experimental values obtained from discrete samples and from model generated data. Cell maintenance was derived experimentally, from respiration rate measurements. The results showed that the Monod model did not reproduce the experimental data accurately, whereas the Marr-Pirt and DEB models demonstrated a good level of reproducibility, probably because cell maintenance was built into their formula. Whatever estimation method was used, the BGE value was always higher in experiment two (the periodically pulsed substrate) as compared to the initially one-pulsed-substrate experiment. Moreover, BGE values estimated without considering cell maintenance (Monod model and empirical formula) were always smaller than BGE values obtained from models taking cell maintenance into account. Since BGE is commonly estimated using constant experimental systems and ignore maintenance, we conclude that these typical methods underestimate BGE values. On a larger scale, and for biogeochemical cycles, this would lead to the conclusion that, for a given DOC supply rate and a given DOC consumption rate, these BGE estimation methods overestimate the role of bacterioplankton as CO2 producers.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 72
    Publication Date: 2010-01-29
    Description: A three-dimensional circulation model that includes a representation of anthropogenic carbon as a passive tracer is forced with climatological surface fluxes. This simulation is then used to compute offline the anthropogenic ΔpCO2 (defined as the difference between the atmospheric CO2 and its seawater partial pressure) trends over three decades between the years 1970 and 2000. It is shown that the mean increasing trends in ΔpCO2 reflects an increase of the seasonal amplitude of ΔpCO2. In particular, the ocean uptake of anthropogenic CO2 is decreasing (negative trends in ΔpCO2) in boreal (austral) summer in the Northern (Southern) Hemisphere in the subtropical gyres between 20° N(S) and 40° N(S). In our simulation, the increased amplitude of the seasonal trends of the ΔpCO2 is mainly explained by the seasonal sea surface temperature (SST) acting on the anthropogenic increase of the dissolved inorganic carbon (DIC). It is also shown that the seasonality of the anthropogenic DIC has very little effect on the decadal trends. This study underscores the need for surface CO2 measurements that resolve the seasonal cycle throughout much of the extratropical oceans.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 73
    Publication Date: 2010-03-15
    Description: During the last century (1900s) industrialized forms of agriculture and human activities have caused extensive eutrophication of Baltic Sea waters. As a consequence, the Baltic Sea developed a hypoxic zone that has caused serve ecosystem disturbance. Climate forcing has also been proposed to be responsible for the reported trends in hypoxia (
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 74
    Publication Date: 2010-01-05
    Description: Vertical patterns of soil organic carbon (SOC), total nitrogen (TN) and C:N stoichiometry are crucial for understanding biogeochemical cycles in high-altitude ecosystems, but remain poorly understood. In this study, we investigated vertical distributions of SOC and TN as well as their stoichiometric relationships in alpine grasslands on the Tibetan Plateau using data of 405 profiles surveyed from 135 sites across the plateau during 2001–2004. Our results showed that, both SOC and TN in alpine grasslands decreased with soil depth, while C:N ratio did not exhibit significant change along soil profile. The associations of SOC and TN content (amount per area) with environmental factors diminished with soil depth. Soil carbon content was nearly proportional to nitrogen content with a slope of 1.04 across various various grassland types. The slope did not differ significantly between alpine steppe and alpine meadow or between alpine grasslands and global ecosystems, and also did not reveal significant differences among various soil depth intervals, suggesting that soil carbon-nitrogen coupling is irrespective of ecosystem types and soil depths.
    Print ISSN: 1810-6277
    Electronic ISSN: 1810-6285
    Topics: Biology , Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 75
    Publication Date: 2010-07-12
    Description: Recent studies have shown that sub-mesoscales (SM, ~1 km) play an important role in mixed layer dynamics and have concluded that it has become necessary to include them in ocean global circulation models, OGCMs. In part A, we developed and assessed a parameterization of the vertical SM tracer flux for OGCMs that resolve mesoscales M but not SM. In the present paper, we derive a parameterization of the vertical SM tracer flux for OGCMs that do not resolve either M or SM, as those used in climate studies.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 76
    Publication Date: 2010-08-31
    Description: Salinity plays a key role in the determination of the thermodynamic properties of seawater and the new TEOS-101 standard provides a consistent and effective approach to dealing with relationships between salinity and these thermodynamic properties. However, there are a number of practical issues that arise in the application of TEOS-10, both in terms of accuracy and scope, including its use in the reduction of field data and in numerical models. First, in the TEOS-10 formulation for IAPSO Standard Seawater, the Gibbs function takes the Reference Salinity as its salinity argument, denoted SR, which provides a measure of the mass fraction of dissolved material in solution based on the Reference Composition approximation for Standard Seawater. We discuss uncertainties in both the Reference Composition and the Reference-Composition Salinity Scale on which Reference Salinity is reported. The Reference Composition provides a much-needed fixed benchmark but modified reference states will inevitably be required to improve the representation of Standard Seawater for some studies. The Reference-Composition Salinity Scale should remain unaltered to provide a stable representation of salinity for use with the TEOS-10 Gibbs function and in climate change detection studies. Second, when composition anomalies are present in seawater, no single salinity variable can fully represent the influence of dissolved material on the thermodynamic properties of seawater. We consider three distinct representations of salinity that have been used in previous studies and discuss the connections and distinctions between them. One of these variables provides the most accurate representation of density possible as well as improvements over Reference Salinity for the determination of other thermodynamic properties. It is referred to as "Density Salinity" and is represented by the symbol SAdens; it stands out as the most appropriate representation of salinity for use in dynamical physical oceanography. The other two salinity variables provide alternative measures of the mass fraction of dissolved material in seawater. "Solution Salinity", denoted SAsoln, is the most obvious extension of Reference Salinity to allow for composition anomalies; it provides a direct estimate of the mass fraction of dissolved material in solution. "Added-Mass Salinity", denoted SAadd, is motivated by a method used to report laboratory experiments; it represents the component of dissolved material added to Standard Seawater in terms of the mass of material before it enters solution. We also discuss a constructed conservative variable referred to as "Preformed Salinity", denoted S*, which will be useful in process-oriented numerical modelling studies. Finally, a conceptual framework for the incorporation of composition anomalies in numerical models is presented that builds from studies in which composition anomalies are simply ignored up to studies in which the influences of composition anomalies are accounted for using the results of biogeochemical models. 1TEOS-10: international thermodynamic equation of seawater 2010, http://www.teos-10.org.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 77
    Publication Date: 2010-04-07
    Description: As seawater circulates through the global ocean, its relative composition undergoes small variations. This results in changes to the conductivity/salinity/density relationship, which is currently well-defined only for Standard Seawater obtained from a particular area in the North Atlantic. These changes are investigated here by analysis of laboratory experiments in which salts are added to seawater, by analysis of oceanic observations of density and composition anomalies, and by mathematical investigation using a model relating composition, conductivity, and density of arbitrary seawaters. Mathematical analysis shows that understanding and describing the effect of changes in relative composition on operational estimates of salinity using the Practical Salinity Scale 1978 and on density using an equation of state for Standard Seawater require the use of a number of different salinity variables and a family of haline contraction coefficients. These salinity variables include an absolute salinity SAsoln, a density salinity SAdens, the reference salinity SR, and an added-mass salinity SAadd. In addition, a new salinity variable S∗ is defined, which represents the preformed salinity of a Standard Seawater component to which biogeochemical processes add material. In spite of this complexity, observed correlations between different ocean biogeochemical processes allow the creation of simple formulas that can be used to convert between the different salinity and density measures, allowing for the operational reduction of routine oceanographic observations.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 78
    Publication Date: 2010-03-10
    Description: The oceanic circulation around the Hawaiian archipelago is characterized by a complex circulation and the presence of mesoscale eddies west of the islands. These eddies typically develop and persist for weeks to several months in the area during persistent trade wind conditions. In order to find the best setup of a regional ocean model and to better understand the role of the wind forcing in the eddy formation, we compare numerical results obtained using two different wind stress databases: COADS and QuikSCAT. A detailed comparative analysis of wind forcing, modeled kinetic energy and eddy generation is proposed. Moreover, numerical cyclonic eddies are compared with the ones observed during the cruises E-FLUX (Dickey et al., 2008). The main features of the ocean circulation in the area are well reproduced by our model forced by both COADS and QuickSCAT climatologies. Nevertheless, significant differences appear in the levels of kinetic energy and vorticity. The wind-forcing spatial resolution clearly affects the way in which the wind momentum feeds the mesoscale phenomena, and, the higher the resolution, the more realistic the ocean circulation. In particular, the simulation forced by QuikSCAT wind data reproduces well the observed energetic mesoscale structures and their hydrological characteristics and behavior.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 79
    Publication Date: 2010-02-19
    Description: This study presents linear trends of coastal upwelling intensity in the later part of the 20th century (1960–2001) employing various indices of upwelling, derived from meridional wind stress and sea surface temperature. The analysis was conducted in the four major coastal upwelling regions in the world, which are off North-West Africa, Lüderitz, California and Peru respectively. The trends in meridional wind stress showed a steady increase of intensity from 1960–2001, which was also reflected in the SST index calculated for the same time period. The steady cooling observed in the instrumental records of SST off California substantiated this observation further. Correlation analysis showed that basin-scale oscillations like the Atlantic Multidecadal Oscillation (AMO) and the Pacific Decadal Oscillation (PDO) could not be directly linked to the observed increase of upwelling intensity off NW Africa and California respectively. The relationship of the North Atlantic Oscillation (NAO) with coastal upwelling off NW Africa turned out to be ambiguous due to a negative correlation between the NAO index and the meridional wind stress and a lack of correlation with the SST index. Our results give additional support to the hypothesis that the coastal upwelling intensity increases globally because of raising greenhouse gas concentrations in the atmosphere and an associated increase of the land-sea pressure gradient and meridional wind stress.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 80
    Publication Date: 2010-02-02
    Description: This numerical study aims to assess the role of the wind stress and its resolution on the coastal circulation around the Promontorio of Portofino, a blunt cape in the Ligurian Sea (Northwestern Mediterranean). A high-resolution hydrodynamical numerical model, forced at the inflow open boundary by a coarser regional model, is run in three different configurations: no wind, 21-km and 7-km resolution winds. Moreover, the effect of using different values for the drag coefficient in the wind stress formulation is also tested. Sensitivity analysis of the mass transport and of the current velocity highlights that the greater effect of the wind is near the coast and the higher resolution wind forcing increases the intensity of a coastal countercurrent and of an eddy in the lee of the cape. A cluster analysis is performed to distinguish the main wind patterns and the main coastal flow patterns in the area under study for 2001–2003. It is shown that the typical wind regimes are coherent with the current ones highlighting the key role played by the wind in enhancing the coastal dynamics and the eddy formation around the cape.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 81
    Publication Date: 2010-01-29
    Description: Continental shelves play a key role in the cycling of nitrogen and carbon. Here the physical transport and biogeochemical transformation processes affecting the fluxes into and out of continental shelf systems are reviewed, and their role in the global cycling of both elements is discussed. Uncertainties in observation-based estimates of nitrogen and carbon fluxes mostly result from uncertainties in the shelf-open ocean exchange of organic and inorganic matter, which is hard to quantify based on observations alone, but can be inferred from biogeochemical models. Model-based nitrogen and carbon budgets are presented for the Northwestern North Atlantic continental shelf. Results indicate that shelves are an important sink for fixed nitrogen and a source of alkalinity, but are not much more efficient in exporting organic carbon to the deep ocean than the adjacent open ocean for the shelf region considered.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 82
    Publication Date: 2010-02-24
    Description: Multichannel seismic data acquired in the Lesser Antilles in the western tropical North Atlantic indicate that the seismic reflection method has imaged an oceanic thermohaline staircase. Synthetic modeling of observed density and sound speed profiles corroborates inferences from the seismic imagery. Laterally coherent, uniform layers are present at depths ranging from 550–700 m and have a separation of ~20 m, with thicknesses increasing with depth. Reflection coefficient, a measure of the acoustic impedance contrasts, associated with the interfaces is one order of magnitude greater than the background levels. Hydrography sampled in previous surveys puts a constraint on the longevity of these layers in this area to within a maximum of three years. Spectral analysis of layer horizons in the thermohaline staircase indicates that internal wave activity is anomalously low, suggesting weak internal wave-induced turbulence and mixing. Results from two independent measurements, the application of a finescale parameterization to observed high-resolution velocity profiles and direct measurements of turbulent dissipation rate, confirm the low levels of turbulence and mixing. The lack of internal wave-induced mixing allows for the maintenance of the staircase. Our observations show the potential that seismic oceanography can contribute to an improved understanding of temporal occurrence rates, and the geographical distribution of thermohaline staircases and can improve current estimates of vertical mixing rates ascribable to salt fingering in the global ocean.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 83
    Publication Date: 2010-02-04
    Description: The transfer velocity determines the rate of exchange of a gas across the air-water interface for a given deviation from Henry's law equilibrium between the two phases. In the thin film model of gas exchange, which is commonly used for calculating gas exchange rates from measured concentrations of trace gases in the atmosphere and ocean/freshwaters, the overall transfer is controlled by diffusion-mediated films on either side of the air-water interface. Calculating the total transfer velocity (i.e. including the influence from both molecular layers) requires the Henry's law constant and the Schmidt number of the gas in question, the latter being the ratio of the viscosity of the medium and the molecular diffusivity of the gas in the medium. All of these properties are both temperature and (on the water side) salinity dependent and extensive calculation is required to estimate these properties where not otherwise available. The aim of this work is to standardize the application of the thin film approach to flux calculation from measured and modelled data, to improve comparability, and to provide a numerical framework into which future parameter improvements can be integrated. A detailed numerical scheme is presented for the calculation of the gas and liquid phase transfer velocities (ka and kw respectively) and the total transfer velocity, K. The scheme requires only basic physical chemistry data for any gas of interest and calculates K over the full range of temperatures, salinities and wind-speeds observed in and over the ocean. Improved relationships for the wind-speed dependence of ka and for the salinity-dependence of the gas solubility (Henry's law) are derived. Comparison with alternative schemes and methods for calculating air-sea flux parameters shows good agreement in general but significant improvements under certain conditions. The scheme is provided as a downloadable program in the supplementary material, along with input files containing molecular weight, solubility and structural data for 80 gases of general interest, enabling calculation of the total transfer velocity over ranges of temperature and salinity for each gas.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 84
    Publication Date: 2010-03-11
    Description: An energy-conservative metric based on the discrete wavelet transform is applied to assess the relative energy distribution of non-stationary extreme sea level events across different temporal scales. The metric is applied to coastal events at Key West and Pensacola Florida as a function of two Atlantic Multidecadal Oscillation (AMO) regimes. Under AMO warm conditions there is a small but significant redistribution of event energy from nearly static into more dynamic timescales at Key West, while at Pensacola the AMO-dependent changes in temporal event behaviour are less pronounced. Extreme events with increased temporal dynamics are consistent with an increase in total energy of event forcings which may be a reflection of more energetic storm events during AMO warm phases. As dynamical models mature to the point of providing regional climate index predictability, coastal planners may be able to consider such temporal change metrics in planning scenarios.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 85
    Publication Date: 2010-01-18
    Description: There is growing understanding that recent deterioration of the Black Sea ecosystem was partly due to changes in the marine physical environment. This study uses high resolution 0.25° climatology to analyze sea surface temperature variability over the 20th century in two contrasting regions of the sea. Results show that the deep Black Sea was cooling during the first three quarters of the century and was warming in the last 15–20 years; on aggregate there was a statistically significant cooling trend. The SST variability over the Western shelf was more volatile and it does not show statistically significant trends. The cooling of the deep Black Sea is at variance with the general trend in the North Atlantic and may be related to the decrease of westerly winds over the Black Sea, and a greater influence of the Siberian anticyclone. The timing of the changeover from cooling to warming coincides with the regime shift in the Black Sea ecosystem.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 86
    Publication Date: 2010-03-04
    Description: The role of an increased numerical vertical resolution, leading to an explicit resolution of the bottom Ekman layer dynamics, is investigated. Using the hydrostatic ocean model NEMO-OPA9, we demonstrate that the dynamics of an idealised gravity current (on an inclined plane), is well captured when a few (around five) sigma-coordinate levels are added near the ocean floor. Such resolution allows to considerably improve the representation of the descent and transport of the gravity current and the Ekman dynamics near the ocean floor, including the important effect of Ekman veering, which is usually neglected in today's simulations of the ocean dynamics. Results from high resolution simulations (with σ and z-coordinates) are compared to simulations with a vertical resolution commonly employed in today's ocean models. The latter show a downslope transport that is reduced by almost an order of magnitude and the decrease in the along slope transport is reduced six-fold. We strongly advocate for an increase of the numerical resolution at the ocean floor, similar to the way it is done at the ocean surface and at the lower boundary in atmospheric models.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 87
    Publication Date: 2010-02-09
    Description: Photo-optical systems are common in marine sciences and have been extensively used in coastal and deep-sea research. However, due to technical limitations in the past photo images had to be processed manually or semi-automatically. Recent advances in technology have rapidly improved image recording, storage and processing capabilities which are used in a new concept of automated in situ gas quantification by photo-optical detection. The design for an in situ high-speed image acquisition and automated data processing system is reported ("Bubblemeter"). New strategies have been followed with regards to back-light illumination, bubble extraction, automated image processing and data management. This paper presents the design of the novel method, its validation procedures and calibration experiments. The system will be positioned and recovered from the sea floor using a remotely operated vehicle (ROV). It is able to measure bubble flux rates up to 10 L/min with a maximum error of 33% for worst case conditions. The Bubblemeter has been successfully deployed at a water depth of 1023 m at the Makran accretionary prism offshore Pakistan during a research expedition with R/V Meteor in November 2007.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 88
    Publication Date: 2010-01-18
    Description: Operational Oceanography (OO) has now emerged to a stage that allows the design, development and execution of marine core services tailored to user requirements. As such it is also feasible to provide routine production of environmental and climate indicators. Indicators are synthetic indices of environmental changes at various temporal and spatial scales. In this paper we outline the possible contribution and strengthening of existing indicator reporting based on OO products followed by a discussion of the relevance of such improved reporting for marine environmental policy implementation and regulation. In particular, it capitalizes on the main achievements of the Marine Environment and Security of the European Area (MERSEA) project, the outcome of a European Marine Monitoring and Assessment (EMMA) workshop on the connection between operational oceanography and the European Marine Strategy (EMS) Directive and the regular European Environmental Agency (EEA) assessment reports.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 89
    Publication Date: 2010-03-03
    Description: Long-term response of CO2 fluxes to climate change at the ocean surface and the ocean interior are investigated using a coupled climate-carbon cycle model. This study also presents the first attempt in quantifying the evolution of lateral transport of anthropogenic carbon under future climate change. Additionally, its impact on regional carbon storage and uptake are also evaluated. For the 1850–2100 period, our climate change simulation predicts oceanic uptake of anthropogenic carbon of about 538 Pg C. Another simulation indicates that changes in physical climate alone results in a release of natural carbon of about 22 Pg C. The natural carbon outgassing is attributed to the reduction in solubility and change in wind pattern in the Southern Hemisphere. After the anthropogenic carbon passes through the air-sea interface, it is predominantly transported along the large scale overturning circulation below the surface layer. The spatial variations in the transport patterns in turn influence the evolution of future regional carbon uptake. In the North Atlantic, a slow down in Atlantic Meridional Overturnning Circulation weakens the penetration strength of anthropogenic carbon into the deeper ocean, which leads to the reduced uptake rate in this region. In contrast, more than half of the anthropogenic carbon taken up in the high latitude Southern Ocean region (south of 58° S) are efficiently and continuously exported northward, predominantly into intermediate waters. This peculiar transport mechanism allow continuous increase in future carbon uptake in the high latitude Southern Ocean, where the annual uptake strength could reach 3.5 g C m−2 yr−1, nearly triple the global mean of 1.3 g C m−2 yr−1 by the end of the 21st century. Our study further underlines the key role of the Southern Ocean in controlling long-term future carbon uptake.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 90
    Publication Date: 2010-12-17
    Description: CTD time series from the HYDRO-CHANGES programme and INGRES projects have been collected simultaneously (2004–2008) on the Moroccan shelf and at the Camarinal and Espartel Sills in the strait of Gibraltar. They provide information that supports results recently obtained from the analysis of the two former time series, as well as from a reanalysis of CTD GIBEX profiles (1985–1986). The outflow of Mediterranean Waters, which does not show a clear seasonal variability before entering the strait, strongly mixes within the strait, due mainly to the internal tide, with the seasonally variable inflow of Atlantic Water. The outflow thus gets marked seasonal and fortnightly variabilities within the strait. Furthermore, since the outflow entering the strait displays marked spatial heterogeneity and long-term temporal variabilities, predicting its characteristics when in the ocean appears almost impossible.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 91
    Publication Date: 2010-11-05
    Description: This study focuses on spatial patterns in linear trends of numerically reconstructed basic wave properties (average and extreme wave heights, wave period) in the Baltic Sea. Numerical simulations of wave conditions for 1970–2007, using the WAM wave model and adjusted geostrophic winds, revealed extensive spatial variations in long-term changes in both average and extreme wave heights in the Baltic Sea but almost no changes in the basinwide wave activity and wave periods. There has been a statistically significant decrease in the annual mean significant wave height by more than 10% between the islands of Öland and Gotland and in the southward sea area, and a substantial increase to the south-west of Bornholm, near the coast of Latvia, between Åland and the Swedish mainland, and between the Bothnian Sea and the Bothnian Bay. Variations in extreme wave heights (defined as the threshold for 1% of the highest waves each year) show similar patterns of changes. In several areas the trends in average and extreme wave heights are different. Such a complicated pattern of changes indicates that (i) different regions of the Baltic Sea basin have experienced widespread but essentially different changes in wind properties and (ii) many seemingly controversial trends and variations established in wave properties at different sites in the recent past may reflect the natural spatial variability in the Baltic Sea wave fields.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 92
    Publication Date: 2010-11-05
    Description: We review the procedures and challenges that must be considered when using geoid data derived from the Gravity and steady-state Ocean Circulation Explorer (GOCE) mission in order to constrain the circulation and water mass representation in an ocean general circulation model. It covers the combination of the geoid information with time-mean sea level information derived from satellite altimeter data, to construct a mean dynamic topography (MDT), and considers how this complements the time-varying sea level anomaly, also available from the satellite altimeter. We particularly consider the compatibility of these different fields in their spatial scale content, their temporal representation, and in their error covariances. These considerations are very important when the resulting data are to be used to estimate ocean circulation and its corresponding errors. We describe the further steps needed for assimilating the resulting dynamic topography information into an ocean circulation model using three different operational forecasting and data assimilation systems. We look at methods used for assimilating altimeter anomaly data in the absence of a suitable geoid, and then discuss different approaches which have been tried for assimilating the additional geoid information. We review the problems that have been encountered and the lessons learned in order the help future users. Finally we present some results from the use of GRACE geoid information in the operational oceanography community and discuss the future potential gains that may be obtained from a new GOCE geoid.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 93
    Publication Date: 2010-12-03
    Description: The sensitivity of the biological parameters in a nutrient-phytoplankton-zooplankton-detritus (NPZD) model in the calculation of the air-sea CO2 flux, primary production and detrital export is analysed. The NPZD model is the Hadley Centre Ocean Carbon Cycle model (HadOCC) from the UK Met Office, used in the Hadley Centre Coupled Model 3 (HadCM3) and FAst Met Office and Universities Simulator (FAMOUS) GCMs. Here, HadOCC is coupled to the 1-D General Ocean Turbulence Model (GOTM) and forced with European Centre for Medium-Range Weather Forecasting meteorology to undertake a sensitivity analysis of its twenty biological parameters. Analyses are performed at three sites in the EuroSITES European Ocean Observatory Network: the Central Irminger Sea (60° N 40° W), the Porcupine Abyssal Plain (49° N 16° W) and the European Station for Time series in the Ocean Canary Islands (29° N 15° W) to assess variability in parameter sensitivities at different locations in the North Atlantic Ocean. Reasonable changes to the values of key parameters are shown to have a large effect on the calculation of the air-sea CO2 flux, primary production, and export of biological detritus to the deep ocean. Changes in the values of key parameters have a greater effect in more productive regions than in less productive areas. We perform the analysis using one-at-a-time perturbations and using a statistical emulator, and compare results. The most sensitive parameters are generic to many NPZD ocean ecosystem models. The air-sea CO2 flux is most influenced by variation in the parameters that control phytoplankton growth, detrital sinking and carbonate production by phytoplankton (the rain ratio). Primary production is most sensitive to the parameters that define the shape of the photosythesis-irradiance curve. Export production is most sensitive to the parameters that control the rate of detrital sinking and the remineralisation of detritus.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 94
    Publication Date: 2010-10-04
    Description: The first measurements of bubble size spectra within the near-surface waters of open leads in the central Arctic pack ice were obtained during the Artic Summer Cloud-Ocean Study (ASCOS) in August 2008 at 87–87.6° N, 1–11° W. A significant number of small bubbles (30–100 μm diameter) were present, with concentration decreasing rapidly with size from 100–560 μm; no bubbles larger than 560 μm were observed. The bubbles were present both during periods of low wind speed (U 〈 6 m/s) and when ice covered the surface of the lead. The low wind and short open-water fetch precludes production of bubbles by wave breaking suggesting that the bubbles are generated by processes below the surface. When the surface water was open to the atmosphere bubble concentrations increased with increasing heat loss to the atmosphere. The presence of substantial numbers of bubbles is significant because the bursting of bubbles at the surface provides a mechanism for the generation of aerosol and the ejection of biological material from the ocean into the atmosphere. Such a transfer has previously been proposed as a potential climate feedback linking marine biology and Arctic cloud properties.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 95
    Publication Date: 2010-06-14
    Description: Remote sensing of water colour by ship-mounted sensors represents an important tool for the validation of satellite products and the monitoring of water quality. The recorded radiance from the sea has to be corrected for the surface-reflected radiance from sun and sky in order to obtain the water-leaving radiance. Here the simple case of radiance reflected towards the zenith is studied. A set of observed sky radiance and solar irradiance data from Oslo has been used together with a Gaussian slope distribution for the sea surface in order to estimate the reflected radiance. The spectral range studied is 405–650 nm, the solar zenith angles are in the range 37°–76°, and the wind speeds are up to 10 m s−1. The analysis of the results show that the reflected radiance has to be separated into three contributions: sky radiance and sun rays reflected at the foam-free surface and irradiance reflected by whitecaps and foam. It is then demonstrated that by using four input values, namely the downward irradiance, the sky radiance from the zenith, the solar zenith angle and the wind speed, it is possible to obtain by simple expressions estimates of the reflected radiance that only differ from the former calculated values by relative errors of 4% or less. The analysis also indicates that for the spectral range studied neither the water-leaving radiance nor the surface-reflected radiance can be disregarded relative to the other one in the Case 2 waters of the Oslofjord-Skagerrak area. The results form a first step towards the study of reflected radiance in viewing angles differing from the nadir direction.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 96
    Publication Date: 2010-04-29
    Description: We derive and assess a parameterization of the mixed layer vertical and horizontal mesoscale fluxes of an arbitrary tracer. The results, which are obtained by solving the mesoscale dynamic equations and contain no adjustable parameters, are expressed in terms of the large scale fields resolved by coarse resolution OGCMs (ocean global circulation models). The new model can be put in the right perspective by considering the following. Thus far, the lack of a mixed layer mesoscale model that naturally satisfies the required boundary condition (the vertical flux must vanish at the surface), was remedied by extending the stream function modeled for the adiabatic deep ocean into the mixed layer using an arbitrary tapering function chosen to enforce the required boundary condition. The present model renders the tapering schemes unnecessary for the vertical flux automatically vanishes at the ocean surface. The expressions we derive for the vertical and horizontal mesoscale fluxes are algebraic and should be used in conjunction with any of the available mesoscale models valid in the adiabatic deep ocean. We also discuss a new feature representing the effect of sub-mesoscales on mesoscales. It is shown that in the case of strong wind, one must add to the mean Eulerian velocity that enters the parameterization of the mesoscale fluxes a new term due to sub-mesoscales whose explicit form we work out. The assessment of the model results is as follows. First, previous eddy resolving results indicated a robust re-stratification effect by mesoscales; we show that the model result for the mesoscale vertical flux leads to re-stratification (its second z-derivative is negative) and that it is of the same order of magnitude but opposite sign of the vertical flux by small scale turbulence, leading to a large cancellation. Second, since mesoscales act as a source of the eddy kinetic energy, we compare the predicted surface values vs. the Topex-Poseidon. Third, we carry out an eddy resolving simulation and assess both z-profile and magnitude of the model vertical flux against the simulation data. The tests yield positive results. A more stratified mixed layer has implication for the oceanic absorption of heat and CO2, a feature whose implications on climate predictions we hope to explore in the future.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 97
    Publication Date: 2010-03-15
    Description: The SCOR/IAPSO1 Working Group 127 on Thermodynamics and Equation of State of Seawater has prepared recommendations for new methods and algorithms for numerical estimation of the thermophysical properties of seawater. As an outcome of this work, a new International Thermodynamic Equation of Seawater (TEOS-10) was endorsed by IOC/UNESCO2 in June 2009 as the official replacement and extension of the 1980 International Equation of State, EOS-80. As part of this new standard a source code package has been prepared that is now made freely available to users via the World Wide Web. This package includes two libraries referred to as the SIA (Sea-Ice-Air) library and the GSW (Gibbs SeaWater) library. Information on the GSW library may be found on the TEOS-10 web site (http://www.TEOS-10.org). This publication provides an introduction to the SIA library which contains routines to calculate various thermodynamic properties as discussed in the companion paper. The SIA library is very comprehensive, including routines to deal with fluid water, ice, seawater and humid air as well as equilibrium states involving various combinations of these, with equivalent code developed in different languages. The code is hierachically structured in modules that support (i) almost unlimited extension with respect to additional properties or relations, (ii) an extraction of self-contained sub-libraries, (iii) separate updating of the empirical thermodynamic potentials, and (iv) code verification on different platforms and between different languages. Error trapping is implemented to identify when one or more of the primary routines are accessed significantly beyond their established range of validity. The initial version of the SIA library is available in Visual Basic and FORTRAN as a supplement to this publication and updates will be maintained on the TEOS-10 web site. 1 SCOR/IAPSO: Scientific Committee on Oceanic Research/International Association for the Physical Sciences of the Oceans 2 IOC/UNESCO: Intergovernmental Oceanographic Commission/United Nations Educational, Scientific and Cultural Organization
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 98
    Publication Date: 2010-03-24
    Description: An Acoustic Doppler Current Profiler (ADCP) moored at the deep-sea ANTARES neutrino telescope site near Toulon, France, measured downward vertical currents of amplitudes up to 0.03 m s−1 in spring 2006. The currents were accompanied by enhanced levels of acoustic reflection by a factor of about 10 and by horizontal currents reaching 0.35 m s−1. These observations coincided with high levels of bioluminescence detected by the telescope. Although during winter 2006 deep dense-water formation occurred in this area, episodes of high levels of suspended particles and large vertical currents continuing into the summer are not direct evidence of this process. It is hypothesized that the main process allowing for particles to be moved across the entire water column (2500 m) within a few days, is local convection, triggered by small-mesoscale phenomena, such as meanders including a bipolar vortex, linked with boundary current instabilities.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 99
    Publication Date: 2010-03-16
    Description: Nowadays, several operational forecasts of surface gravity waves are available for a same region through different forecasting systems. However, their results may considerably diverge, and choosing one single forecasting system among them is not an easy task. A recently developed approach consists in merging different forecasts and past observations into a single multi-model prediction system, called the super-ensemble. First implemented in meteorology, the method has also already been tested with success in oceanography for determining temperature, acoustic properties or surface drift. During the DART06 campaigns organized by the NURC, four wave forecasting systems were simultaneously run in the Adriatic Sea, while significant wave height was measured at six stations and along the tracks of two remote sensors, hence offering an opportunity to evaluate the skills of the super-ensemble techniques. The improvement shown during both the learning and testing periods was essentially due to a bias reduction, though the correlation was also increased. The possibility of extrapolating locally obtained results in the whole domain of interest was assessed against satellite observations. Though definitive conclusions can not be drawn from these experiments, the results open the door for further investigations.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 100
    Publication Date: 2010-01-18
    Description: We study the variability of hydrographic preconditioning defined as the heat and salt contents in the Ligurian Sea before convection. The stratification is found to reach a maximum in the intermediate layer in December, whose causes and consequences for the interannual variability of convection are investigated. Further study of the interannual variability and correlation tests between the properties of the deep water formed and the winter surface fluxes support the description of convection as a process that transfers the heat and salt contents from the top and intermediate layers to the deep layer. A proxy for the rate of transfer is given by the final convective mixed layer depth, that is shown to depend equally on the surface fluxes and on the preconditioning. In particular, it was found that deep convection in winter 2004–2005 would have happened even with normal winter conditions, due to low pre-winter stratification.
    Print ISSN: 1812-0806
    Electronic ISSN: 1812-0822
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
Close ⊗
This website uses cookies and the analysis tool Matomo. More information can be found here...