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  • Articles
  • Other Sources  (564)
  • Articles (OceanRep)  (564)
  • Springer  (454)
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  • 2020-2023  (25)
  • 2005-2009  (334)
  • 1995-1999  (205)
  • 1
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    Taylor & Francis
    In:  Écoscience, 5 (3). pp. 361-394.
    Publication Date: 2020-04-20
    Description: It is well documented that animals take risk of predation into account when making decisions about how to behave in particular situations, often trading-off risk against opportunities for mating or acquiring energy. Such an ability implies that animals have reliable information about the risk of predation at a given place and time. Chemosensory cues are an important source of such information. They reliably reveal the presence of predators (or their presence in the immediate past) and may also provide information on predator activity level and diet. In certain circumstances (e.g., in the dark, for animals in hiding) they may be the only cues available. Although a vast literature exists on the responses of prey to predator chemosensory cues (or odours), these studies are widely scattered, from marine biology to biological control, and not well known or appreciated by behavioural ecologists. In this paper, we provide an exhaustive review of this literature, primarily in tabular form. We highlight some of the more representative examples in the text, and discuss some ecological and evolutionary aspects of the use of chemosensory information for prey decision making. Curiously, only one example illustrates the ability of birds to detect predator odours and we have found no examples for terrestrial insects, suggesting a fruitful area for future study.
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  • 2
    Publication Date: 2020-07-14
    Description: Horizontal starch gel electrophoresis was employed to investigate levels of genetic differentiation between 13 samples of the neritic squid species Loligo forbesi Steenstrup obtained from throughout the majority of its known geographical range. Six enzyme loci identified in a preliminary study as being polymorphic were screened for variation between samples. No significant differences in allele distribution were detected between any of the samples obtained from the Faroe Bank in the north to Lisbon in the south, suggesting that squid throughout this range in the vicinity of the continental shelf are able to maintain panmixia, and effectively belong to a single population sharing a common gene pool. No clinal variation in allele distribution was detected throughout this range, a result which complements the findings of a detailed morphological companion study of the same individuals. Comparison of this homogenous European continental shelf population with squid from the Azores revealed highly significant (P〈0.01) differences in allele distribution at five of the six polymorphic enzyme loci studied. A genetic identity value (I) equivalent to 0.93 over 33 loci was obtained. Analysis of F-statistics suggested migration rates between sites to be as low as one individual per five generations, a rate deemed insufficient under most models to prevent divergence by random genetic drift. The large distance and oceanic depths separating the Azores from continental Europe seem to present an effective barrier to gene flow to L. forbesi, a squid belonging to a family considered to be confined in distribution to relatively shallow, near coastal waters. The two populations of squid in the Azores and along the European continental shelf currently both ascribed to L. forbesi should therefore probably best be regarded as relative subspecies.
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  • 3
    Publication Date: 2020-06-10
    Description: Beak lengths (lower rostral length and upper rostral length) were taken for a sample of Moroteuthis ingens which were captured on the Chatham Rise, New Zealand. Beak lengths were plotted against both mantle length and wet weight to determine the relationship between these parameters for future use in biomass estimates in predator analysis. Although M. ingens is markedly sexually dimorphic, with females reaching 5 times the weight of males, there was no obvious sexual dimorphism in either lower or upper rostral length. This resulted in sex-specific relationships between both LRL and mantle length, LRL and weight; and URL and mantle length, and URL and weight. Males appeared to have a curvilinear relationship between beak length and mantle length and beak length and weight (even for log-transformed data). There was also considerable spread in the data in the plot between beak length and weight for females of similar weight. These characteristics of the data makes biomass estimates based on rostral length measurements for this species difficult. Other beak parameters may prove more useful for estimating biomass of M. ingens.
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  • 4
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    Springer
    In:  Marine Biology, 121 (3). pp. 501-508.
    Publication Date: 2017-05-12
    Description: Body size at sexual maturity, egg-size distributions, and potential reproductive output have been estimated for female and male squid, Loligo forbesi Steenstrup, off the west coast of Scotland. Two size modes at maturity were found in both sexes, but separation into size cohorts was more pronounced in males (180 and 350 mm mantle length, ML). Preliminary ageing studies based on statolith ring-counts suggest that these size modes are not due to different age groups at breeding. Females have a single size mode of mature eggs in the proximal oviduct, but may have at least two size modes of eggs within the ovary. This finding is interpreted as evidence of batch-spawning in this squid. There was a weak relationship between total egg numbers (range 1000 to 16000) and body size (range 196 to 318 mm ML) and between mature egg size and body size. Males showed a strong positive relationship between spermatophore length and body length but a weak relationship between total number of spermatophores and body size. The results are discussed in the context of flexibility of breeding strategies in the loliginids and variety of life-cycle patterns.
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  • 5
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    Springer
    In:  Marine Biology, 124 (1). pp. 127-135.
    Publication Date: 2020-07-14
    Description: This study assesses the potential of the tropical loliginid squid Photololigo sp. to lay multiple batches of eggs and examines changes in somatic growth during reproduction. Histological analysis of the ovary and the relative size of the oviduct to mantle weight and ovary weight were used to determine the potential for multiple spawning. Ovaries of mature females always had immature and mature oocytes present, suggesting that not all the oocytes were maturing simultaneously and that multiple batches of eggs were being produced. Furthermore, poor correlations of oviduct weight with body size and ovary weight indicated that mature oocytes were not accumulating in the oviduct for a single spawning event. Both these observations supported the hypothesis that Photololigo sp. has the potential to lay multiple batches of eggs throughout its life. Specific growth rates, length-weight relationships, relative growth of somatic and reproductive tissue and microscopic assessment of muscle tissue were compared between immature and mature females. Growth rates of immature females were almost twice as fast as those of mature females. Mature females also had no large muscle fibres present, suggesting that energy for reproduction was mobilised from the muscle tissue.
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  • 6
    Publication Date: 2017-07-21
    Description: There are some active bottom currents on the northern continental slope of the South China Sea (SCS). Reflection seismic profiles show that the bottom current channels occur in the water depth range of 1000 to 2700 m, extending from the NE to the SW, leading to accumulation of discontinuous drifts with higher sedimentation rates on the eastern side of the channel. The stacking pattern of the layers suggests that these drifts propagated southwestward, following the direction of the bottom currents. One sedimentary drift to the southeast of the Dongsha Islands has the highest sedimentation rate of 97cm/ka in the last 12 ka. The sedimentary characteristics of the sediment layers indicate that these bottom currents are most likley caused by the water movement of a branch of the West Pacific Ocean Current, which enters the northern SCS via the Bashi Strait. Once formed, the bottom currents transport sediments along the northern slope of SCS southwestward and finally disappear into the central basin of the SCS. Due to the bottom current activity, the deep-sea sedimentary process in the northern SCS is complex.
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  • 7
    Publication Date: 2017-10-05
    Description: Silicon is one of the most important elements in the current age of the anthropocene. It has numerous industrial applications, and supports a high-tech multi-billion Euro industry. Silicon has a fascinating biological and geological cycle, interacting with other globally important biogeochemical cycles. In this review, we bring together both biological and geological aspects of the silicon cycle to provide a general, comprehensive review of the cycling of silicon in the environment. We hope this review will provide inspiration for researchers to study this fascinating element, as well as providing a background environmental context to those interested in silicon.
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  • 8
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    Taylor & Francis
    In:  International Geology Review, 41 (3). pp. 243-262.
    Publication Date: 2017-11-24
    Description: A new image of the French continental crust between Brabant (Belgium) and the Basque province of Spain is presented on the basis of considerable recent geological and geophysical information as well as the compilation and reInterprétation of previously available data. The resulting section, which shows the main basement structures to a depth of 45 km, also is the first nonspeculative image of the westernmost part of the Variscan orogen. The French Global Geoscience Transect reveals a complete picture of this orogen between its remnant root and the surface. The divergent thrusts are bounded on the north and in the south by the old Brabant and Ebro-Aquitaine cratons, respectively; these thrusts also involve two previous plate boundaries. The lower part of the orogen is limited by a layered lower crust, probably of Permian age. Near the surface the Hercynian orogen is buried—near the northern end of the transect by the Paris Basin, which can be considered an eastward extension of the English Channel, and in the south by the South Armorican continental margin, which makes a transition between the oceanic crust of the Bay of Biscay and the axis of the Variscan orogen. In this area, the deep Parentis graben is located at the site of pronounced crustal thinning, since only 7 km of Hercynian crust are now preserved.
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  • 9
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    Taylor & Francis
    In:  Marine Georesources & Geotechnology, 27 (3). pp. 201-216.
    Publication Date: 2018-04-24
    Description: In this study, a series of drained triaxial tests were performed in order to examine the effect of cementation on the shear behavior of granular soil. It was observed that the brittle nature and dilative tendency of granular soil is dominant under a low confining stress level, while high confining stress results in a contractive behavior despite the strong cementation bond. Based on experimental results, an idealized concept is suggested to define the shear strength of cemented sand in three distinctive zones: the cementation control zone with a constant cohesion intercept at a low confining stress level, the transition zone in which the cohesion intercept is gradually reduced after a breaking point, and the stress control zone with almost zero cohesion intercept due to breakage of cementation bonds at a high confining stress level. It was shown that the sitting pressures during cementation have little effect on the strength parameters of cemented sand, while the increase of gypsum content and relative density, and the decrease of particle size, result in an increase of the cohesion intercept and the breaking point. In addition, the prediction equations for the shear strength and cohesion intercept in the cementation control zone and the transition zone are suggested from the analytical and experimental interpretation.
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  • 10
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    Taylor & Francis
    In:  South African Journal of Marine Science, 15 (1). pp. 207-223.
    Publication Date: 2020-05-26
    Description: A model is presented which tests the representation of the maturity process in terms of gonadosomatic indices (GSI) in chokka squid Loligo vulgaris reynaudii. It assumes that the true maturation process is reflected by the results of histological investigation, which cannot be used in large-scale ecological work in the field. However, the maturity scales used in ecological studies define some morphological categories which can be linked directly to microscopic development. Therefore, the overlap of GSI ranges for each morphological maturity category may be used to judge how well the GSIs represent the histological stages. Results have shown that the overlap is large and that GSI cannot be recommended as adequately reflecting the maturation process in squid. A morphological scale of maturity with possible broad applications in exploited families of squid is proposed as a better representation of the maturation process than GSI.
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  • 11
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    Taylor & Francis
    In:  South African Journal of Marine Science, 15 (1). pp. 1-7.
    Publication Date: 2020-05-26
    Description: Morphological differences between paralarvae of two loliginid squid species common in southern African waters (Loligo vulgaris reynaudii and Lolliguncula mercatoris) are described. The differences are: Loligo — "cheek patches" consisting of four dark chromatophores, nine large dark dorsal chromatophores on the mantle, tentacular clubs broad and much wider than tentacle stalks, proximal row of three club suckers with others tetraserial, suckers large enough to appear crowded on the club surface; Lolliguncula — "cheek patches" with three dark chromatophores, two pairs of" large, dark dorsal chromatophores on the mantle, tentacular clubs narrow, proximal club suckers arranged in three pairs, suckers small, not particularly crowded. Relationships with other myopsids are briefly discussed.
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  • 12
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    Springer
    In:  Marine Biology, 123 (3). pp. 497-503.
    Publication Date: 2020-07-14
    Description: The natural feeding of 485 Octopus mimus (164 to 3088 g) was studied in relation to the species' life cycle and environmental seasonal variations off the north of Chile from autumn 1991 to summer 1992. Analysis of digestive-tract contents revealed that O. mimus preyed upon 25 different prey items belonging to five zoological groups (Teleostei, Mollusca, Crustacea, Echinodermata and Polychaeta). Cannibalism was only occasional. The results indicate that the diet and food intake of this species are significantly affected by sex and maturation. Senescent individuals ingest a small amount of food, and their diet is mainly based on small, not very motile prey. The food intake, expressed as body weight, of non-senescent individuals is higher in females than in males. Seasonal changes in sea-water temperature seem to be followed by adjustments in food intake. Like other Octopus species, O. mimus appears to be an opportunistic predator.
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  • 13
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    Springer
    In:  Marine Biology, 123 (3). pp. 505-510.
    Publication Date: 2020-07-14
    Description: The relationship between reproduction and condition was studied in a 15 mo sample of 919 maturing, mature and post-spawning female Octopus mimus (388 to 3714 g) caught in Iquique (North Chile). O. mimus is a semelparous species, with reproduction taking place all year round. Investment in reproductive tissues was, on average, 9.9% of mature female body weight, independent of season. However, somatic growth during maturation was dependent on season and varied between 26 and 63% of the whole-body growth in weight. The condition of females did not vary markedly until spawning, although seasonal variations were apparent, winter being the most unfavourable. Condition deteriorated dramatically after spawning, during parental care of the eggs. During this period, somatic-tissue depletion, mainly from the muscles, was 〉25% of the total body weight of mature females. The fecundity of O. mimus was probably limited by the costs associated with parental care of the eggs.
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  • 14
    Publication Date: 2017-06-27
    Description: Cold-water coral carbonate mounds, owing their presence mainly to the framework building coral Lophelia pertusa and the activity of associated organisms, are common along the European margin with their spatial distribution allowing them to be divided into a number of mound provinces. Variation in mound attributes are explored via a series of case studies on mound provinces that have been the most intensely investigated: Belgica, Hovland, Pelagia, Logachev and Norwegian Mounds. Morphological variation between mound provinces is discussed under the premise that mound morphology is an expression of the environmental conditions under which mounds are initiated and grow. Cold-water coral carbonate mounds can be divided into those exhibiting “inherited” morphologies (where mound morphology reflects the morphology of the colonised features) and “developed” morphology (where the mounds assume their own gross morphology mainly reflecting dominant hydrodynamic controls). Finer-scale, surface morphological features mainly reflecting biological growth forms are also discussed.
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  • 15
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    In:  Marine Biology, 150 (6). pp. 1153-1160.
    Publication Date: 2017-06-27
    Description: Sponges of warm- and temperate- but also cold-waters are known to synthesize structurally diverse primary and secondary metabolites. These compounds fulfill a variety of functions including adaptations of the cell membranes to environmental conditions. We show here that boreal sponges of the order Halichondrida are rich sources of brominated lipid fatty acids. The comparison of lipid compositions of halichondrid Demospongiae from boreal and warmer waters indicates an accumulation of brominated fatty acids in sponges from colder settings. Moreover, the spatial distribution of brominated fatty acids in the sponge tissue of one widely distributed sponge of the North-East Atlantic (Phakellia ventilabrum) hints to a function related to membrane fluidity and permeability rather than to defense against predation. However, brominated fatty acids are diagnostic for the presence of bromoperoxidases in sponges and may therefore be potentially useful as markers in a chemical screening for secondary metabolites of pharmacological interest.
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  • 16
    Publication Date: 2018-03-09
    Description: Dissolved and particulate metals (Ag, Cd, Co, Cu, Ni, and Zn) and nutrients (PO4, NO3, and H4SiO4) were measured in Todos Santos Bay (TSB) in August 2005. Two sources producing local gradients were identified: one from a dredge discharge area (DDA) and another south of the port and a creek. The average concentrations of dissolved Cd and Zn (1.3 and 15.6 nM, respectively) were higher by one order of magnitude than the surrounding Pacific waters, even during upwelling, and it is attributed to the presence of a widespread and long-lasting red tide coupled with some degree of local pollution. A clear spatial gradient (10 to 6 pM), from coast to offshore, of dissolved Ag was evident, indicating the influence of anthropogenic inputs. The particulate fraction of all metals, except Cu, showed a factor of ~3 decrease in concentrations from the DDA to the interior of the bay. The metal distributions were related to the bay’s circulation by means of a numerical model that shows a basically surface-wind-driven offshore current with subsurface compensation currents toward the coast. Additionally, the model shows strong vertical currents over the DDA. Principal component analysis revealed three possible processes that could be influencing the metal concentrations within TSB: anthropogenic inputs (Cd, Ag, and Co), biological proceses (NO3, Zn, and Cu), and upwelling and mixing (PO4, H4SiO4, Cd, and Ni). The most striking finding of this study was the extremely high Cd concentrations, which have been only reported in highly contaminated areas. As there was a strong red tide, it is hypothesized that the dinoflagellates are assimilating the Cd, which is rapidly remineralized and being concentrated on the stratified surface layers.
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  • 17
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    In:  Archivum Immunologiae et Therapiae Experimentalis, 57 (6). pp. 393-407.
    Publication Date: 2017-10-11
    Description: The complement system has long been known to be a major element of innate immunity. Traditionally, it was regarded as the first line of defense against invading pathogens, leading to opsonization and phagocytosis or the direct lysis of microbes. However, from the second half of the twentieth century on, it became clear that complement is also intimately involved in the induction and “fine tuning” of adaptive B- and T-cell responses as well as lineage commitment. This growing recognition of the complement system’s multifunctional role in immunity is consistent with the recent paradigm that complement is also necessary for the successful contraction of an adaptive immune response. This review aims at giving a condensed overview of complement’s rise from a simple innate stop-and-go system to an essential and efficient participant in general immune homeostasis and acquired immunity.
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  • 18
    Publication Date: 2018-03-09
    Description: Jamaica Bay, NY, is a highly urbanized estuary within the boroughs of New York City conspicuously lacking published information on dissolved trace metal concentrations. The current study examines the distribution and cycling of trace metals in that embayment with data gathered during cruises in November 2004, April 2005, and June 2006. Most of the metal distributions (Fe, Zn, Co, Ag, Cu, Pb, Ni) in the water column are explained by the input of substantial volumes of treated wastewater effluent. However, several lines of evidence suggest that submarine groundwater discharge (SGD) is also an important source of dissolved Fe, Zn, Co, Ni, and isotopically distinct stable Pb ratios (206Pb, 207Pb, 208Pb) in the Bay. Conversely, the recirculated seawater component of SGD is an apparent sink for dissolved Mo. This study provides the first measurements of dissolved trace metals in the Jamaica Bay water column and subterranean estuary and provides evidence for trace metal input due to SGD.
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  • 19
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    In:  In: The Evolution and History of Human Populations in South Asia. , ed. by Petraglia, M. D. and Allchin, B. Springer, Dordrecht, pp. 173-200.
    Publication Date: 2017-11-24
    Type: Book chapter , NonPeerReviewed
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  • 20
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    In:  Journal of Comparative Physiology A, 194 (7). pp. 641-651.
    Publication Date: 2018-07-04
    Description: A major part of the cubozoan central nervous system is situated in the eye-bearing rhopalia. One of the neuronal output channels from the rhopalia carries a swim pacemaker signal, which has a one-to-one relation with the swim contractions of the bell shaped body. Given the advanced visual system of box jellyfish and that the pacemaker signal originates in the vicinity of these eyes, it seems logical to assume that the pacemakers are modified by the visual input. Here, the firing frequency and distribution of inter-signal intervals (ISIs) of single pacemakers are examined in the Caribbean box jellyfish, Tripedalia cystophora. It is shown that the absolute ambient light intensity, if kept constant, has no influence on the signal, but if the intensity changes, it has a major impact on both frequency and ISIs. If the intensity suddenly drops there is an increase in firing frequency, and the ISIs become more homogeneously distributed. A rise in intensity, on the other hand, produces a steep decline in the frequency and makes the ISIs highly variable. These electrophysiological data are correlated with behavioral observations from the natural habitat of the medusae.
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  • 21
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    In:  Marine Geophysical Researches, 20 (3). pp. 239-247.
    Publication Date: 2018-02-08
    Description: Bottom shots have been used for a number of years in seismic studies on the ocean floor. Most experiments utilized explosives as the energy source, though researchers have recognized the usefulness of collapsing water voids to produce seismoacoustic signals. Implosive sources, however, suffered generally from a lack of control of source depth. We present a new experimental tool, called SEEBOSEIS, to carry out seismic experiments on the seafloor utilizing hollow glass spheres as controlled implosive sources. The source is a 10-inch BENTHOS float with penetrator. Inside the sphere we place a small explosive charge (two detonators) to destabilize the glass wall. The time of detonation is controlled by an external shooting device. Test measurements on the Ninetyeast Ridge, Indian Ocean, show that the implosive sources can be used in seismic refraction experiments to image the subbottom P- wave velocity structure in detail beyond that possible with traditional marine seismic techniques. Additionally, the implosions permit the efficient generation of dispersed Scholte waves, revealing upper crustal S-wave velocities. The frequency band of seismic energy ranges from less than 1 Hz for Scholte modes up to 1000 Hz for diving P-waves. Therefore, broadband recording units with sampling rates 〉2000 Hz are recommended to sample the entire wave field radiated by implosive sources.
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  • 22
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    In:  African Journal of Marine Science, 27 (3). pp. 597-608.
    Publication Date: 2018-04-11
    Description: The distribution of five dominant calanoid copepods was related to different water masses in the Angola-Benguela Front system. Five water bodies were identified by principal component analysis, on the basis of abiotic parameter such as temperature, salinity, dissolved oxygen, phosphate, silicate, nitrate and nitrite. These parameters were reduced to single factors and arranged along two principal component axes. The copepod species incuded females and copepodites C5 of Calanoides carinatus and females of Metridia lucens, Centropages brachiatus, Nannocalanus minor and Aetideopsis carinata. The water bodies identified in the frontal system were related to currents, upwelling processes, an oxygen minimum layer and biological modification. The different copepod species, as well as the two ontogenetic stages of C. carinatus, showed clear preference for specific water bodies, and their behavioural and physiological adaptations to the environment are discussed.
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  • 23
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    In:  Philosophical Magazine, 87 (32). pp. 4987-5016.
    Publication Date: 2018-04-11
    Description: Force chain buckling, leading to unjamming and shear banding, is examined quantitatively via a discrete element analysis of a two-dimensional, densely-packed, cohesionless granular assembly subject to quasistatic, boundary-driven biaxial compression. A range of properties associated with the confined buckling of force chains has been established, including: degree of buckling, buckling modes, spatial and strain evolution distributions, and relative contributions to non-affine deformation, dilatation and decrease in macroscopic shear strength and potential energy. Consecutive cycles of unjamming–jamming events, akin to slip–stick events arising in other granular systems, characterize the strain-softening regime and the shear band evolution. Peaks in the dissipation rate, kinetic energy and local non-affine strain are strongly correlated: the largest peaks coincide with each unjamming event that is evident in the concurrent drops in the macroscopic shear stress and potential energy. Unjamming nucleates from the buckling of a few force chains within a small region inside the band. A specific mode of force chain buckling, prevalent in and confined to the shear band, leads to above-average levels of local non-affine strain and release of potential energy during unjamming. Ongoing studies of this and other buckling modes from a structural stability standpoint serve as the basis for the formulation of internal variables and associated evolution laws, central to the development of thermomicromechanical constitutive theory for granular materials.
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  • 24
    Publication Date: 2020-06-12
    Description: Two new compounds, 2, 3, 5-trimethyl-6-(3-oxobutan-2-yl)-4H-pyran-4-one (1) and (2R)-2, 3-dihydro-7-hydroxy-6, 8-dimethyl-2-[(E)-prop-1-enyl] chromen-4-one (2), together with six known compounds (3–8), were isolated from a deep-sea fungus, identified as Aspergillus sydowi, by a bioassay-guided method. Their structures were elucidated by spectroscopic methods and the cytotoxicities were evaluated by SRB method.
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  • 25
    Publication Date: 2018-01-19
    Description: In the euxinic waters of the NW’ Black Sea shelf, tower-like carbonate build-ups up to several metres in height grow at sites of cold methane seepage. These structures are part of an unique microbial ecosystem that shows a considerable biodiversity and a remarkable degree of organization. The accretion of the build-ups is promoted by the growth of centimetre-sized, methane-filled spheres constructed by calcifying microbial mats. Progressive mineralization of these spheres involves the early precipitation of strongly luminescent high-Mg-calcite rich in iron sulphides, and closely interfingered aragonite phases that finally create the stable (mega-) thrombolithic fabric of the towers. Within the microbial mats, microorganisms occur in distinctive spatial arrangements. Major players among the microbial consortia are the archaea groups ANME-1 and ANME-2, Crenarchaeota, and sulphate-reducing bacteria (SRB) of the Desulfosarcina/Desulfobacterium group. The intracellular precipitation of iron sulphides (greigite) by some of these bacteria, growing in close association with ANME-2, suggests iron cycling as an additional biogeochemical pathway involved in the anaerobic oxidation of methane (AOM).
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  • 26
    Publication Date: 2017-11-02
    Description: A new 30-arc second resolution global topography/bathymetry grid (SRTM30_PLUS) has been developed from a wide variety of data sources. Land and ice topography comes from the SRTM30 and ICESat topography, respectively. Ocean bathymetry is based on a new satellite-gravity model where the gravity-to-topography ratio is calibrated using 298 million edited soundings. The main contribution of this study is the compilation and editing of the raw soundings, which come from NOAA, individual scientists, SIO, NGA, JAMSTEC, IFREMER, GEBCO, and NAVOCEANO. The gridded bathymetry is available for ftp download in the same format as the 33 tiles of SRTM30 topography. There are 33 matching tiles of source identification number to convey the provenance of every grid cell. The raw sounding data, converted to a simple common format, are also available for ftp download.
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  • 27
    Publication Date: 2018-03-15
    Description: Cirripedes are one of the major groups of fouling organism in the marine environment. The cyprid can, before a permanent attachment, actively explore and walk on the substratum using its antennules in a bipedal fashion without leaving the surface. Studying the structure of the cyprid antennule is therefore important for understanding the events that culminate in biofouling by barnacles. There are at present no complete, standardised accounts of the structure of the cyprid antennules in thoracican barnacles, and moreover, the existing accounts vary in their use of terminology. This article describes the cyprid antennule of the barnacle Megabalanus rosa. This barnacle species is common in E Asia, and the cyprids have previously been used in several biofouling studies. All externally visible setae on the antennules have been mapped; these comprise both chemosensors with a terminal pore, a putative aesthetasc-like seta and mechano-sensory setae. More setae were found on the attachment disc than in previous scanning electron microscope-based studies, but not all structures that can be seen with transmission electron microscopy were visible. The disc itself seems to have a variable surface area, which could assist in exploring rough surfaces. The various lengths of the antennular setae, coupled with the disposition of the segments, enable the cyprid to cover a wide swath of substratum during exploratory walking. A new terminology is proposed for cyprid antennular setae, which will form a basis for future comparative and functional studies of cirripede settlement.
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  • 28
    Publication Date: 2018-01-19
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  • 29
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    In:  Journal of the Geological Society of India, 46 . pp. 353-358.
    Publication Date: 2020-07-16
    Description: Based on various lines of evidence such as the widespread occurrence of basalts, pumice, volcanic glass shards and their transformational products (zeolites, palagonites, and smectite-rich sediments), we suggest the presence of a volcanic province in the Central Indian Basin (CIB). In addition to the rocks studied, the occurrence of many morpho-tectonic features such as seamounts, abyssal hills and major fracture zones at 73 degrees E, 75 degrees 45'E and 79 degrees E, have helped in correlating and in deciphering the source of the rock types. Further, the large manganese nodule fields in the CIB are seen to occur in conjunction with the volcanic materials, since the latter forms nuclei and substrates for ferromanganese deposits. It is concluded that a spatial relation exists between the occurrence of the volcanic materials and the ferromanganese deposit in the CIB
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  • 30
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    In:  Geomechanics and Geoengineering, 2 (1). pp. 61-74.
    Publication Date: 2018-05-04
    Description: A simple unified critical state constitutive model for bonded geomaterials is presented in this paper. The model, which is called CASM-n, is an enhancement of an existing unified critical state model for reconstituted geomaterials (CASM). Characteristic behaviours of a bonded geomaterial such as the pre-yield higher strength and stiffness and the cohesive–frictional shearing mode in the post-yield region are taken into account and included in the reference model. The salient feature of the proposed model is the incorporation of cohesive component into the stress–dilatancy relationship. Consideration of the contribution of cohesion to plastic flow allows the modelling of delayed dilatancy and softening–contraction behaviour, which are two interesting phenomena observed in bonded geomaterials.
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  • 31
    Publication Date: 2018-06-12
    Description: The Gakkel Ridge in the Arctic Ocean with its adjacent Nansen and Amundsen Basins is a key region for the study of mantle melting and crustal generation at ultraslow spreading rates. We use free-air gravity anomalies in combination with seismic reflection and wide-angle data to compute 2-D crustal models for the Nansen and Amundsen Basins in the Arctic Ocean. Despite the permanent pack-ice cover two geophysical transects cross both entire basins. This means that the complete basin geometry of the world’s slowest spreading system can be analysed in detail for the first time. Applying standard densities for the sediments and oceanic crystalline crust, the gravity models reveal an unexpected heterogeneous mantle with densities of 3.30 × 103, 3.20 × 103 and 3.10 × 103 kg/m3 near the Gakkel Ridge. We interpret that the upper mantle heterogeneity mainly results from serpentinisation and thermal effects. The thickness of the oceanic crust is highly variable throughout both transects. Crustal thickness of less than 1 km dominates in the oldest parts of both basins, increasing to a maximum value of 6 km near the Gakkel Ridge. Along-axis heat flow is highly variable and heat flow amplitudes resemble those observed at fast or intermediate spreading ridges. Unexpectedly, high heat flow along the Amundsen transect exceeds predicted values from global cooling curves by more than 100%.
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  • 32
    Publication Date: 2020-07-09
    Description: A study of the echo peak amplitudes from known nodule areas is initiated to observe the acoustic response for varying nodule abundances and number densities. A statistical study of the peak amplitudes from different nodule areas confirms that the coefficient of variation is the highest for medium nodule abundance and number density. Echo fluctuation study based on the Rician probability density function (PDF) establishes that the non‐nodule sediment bottom contributes to less scattering, i.e., it is a microtopographic type, whereas scattering is dominant in the nodule‐bearing areas. The spectral studies are conducted on depth data of different areas. This study ensures that the signal scattering in the nodule bottom area is due to the nodules lying on the seabed rather than the large / small‐scale topographic variations. The study based on Poisson PDF for nodule area confirms this fact again. Agreement between the nodule distribution and the Poisson distribution parameter is clearly seen. Such a relation is not observed in the case of Rician density functions.
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  • 33
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    In:  Polar Biology, 15 (7). pp. 457-463.
    Publication Date: 2018-08-10
    Description: The diet of emperor penguins Aptenodytes forsteri was studied during late austral summer at Drescher Inlet, eastern Weddell Sea, Antarctica. Antarctic krill Euphausia superba was a major component of the food, accounting for 75% of all prey items. Emperor penguins appear to feed on krill during shallow dives under the fast sea ice. Fish, mainly nototheniids, accounted for less than 20% by number of all prey. An evaluation of the main prey types in terms of mass indicated, however, that fish represented up to 75% approximately of prey mass. Feeding experiments were performed on captive penguins and showed that squid beaks can accumulate for up to 3 weeks within the stomach without any clear signs of erosion. The lack of cephalopod soft parts in the samples makes it likely that all squid beaks were derived from animals captured some time previously. Squid seems to be a very minor dietary component of emperor penguins at the Drescher Inlet.
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  • 34
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    In:  In: Cold-Water Corals and Ecosystems. , ed. by Freiwald , A. and Roberts , J. M. Erlangen Earth Conference Series . Springer, Berlin, pp. 731-744. ISBN 978-3-540-24136-2
    Publication Date: 2017-07-07
    Description: Colonial non-zooxanthellate corals from deep-water coral reefs, Lophelia pertusa and Madrepora oculata, produce large amounts of extracellular mucus (EMS). This mucus has various functions, e.g., an antifouling capability protecting the coral skeleton from attacks of endolithic and boring organisms. Both corals show thick epithecal and exothecal skeletal parts with a clear lamellar growth pattern. The formation of the epitheca is unclear. It is supposed that the EMS play a central role during the calcification process of the epithecal skeletal parts. Staining with the fluorochrome tetracycline has shown an enrichment of Ca2+ ions in the mucus. In order to investigate this hypothesis, the protein content of the mucus and the intracrystalline organic matter from newly formed epithecal aragonite of Madrepora oculata was determined via sodium dodecyl sulfate (SDS) gel electrophoresis. Identical band patterns within both substances could be detected, one around 45 kDa molecular weight and a cluster around 30–35 kDa molecular weight. The occurrence of identical protein patterns within the mucus and in the newly formed aragonite confirms the idea that the mucus plays an important role during the organomineralization of the coral epitheca.
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  • 35
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    In:  In: Cold-Water Corals and Ecosystems. , ed. by Freiwald, A. and Roberts, J. M. Erlangen Earth Conference Series . Springer, Berlin, pp. 771-805.
    Publication Date: 2017-07-07
    Description: The rate of discovery of reefs of the cold-water coral Lophelia pertusa (Linnaeus, 1758) has been remarkable, and attributable to the increased use of underwater video. These reefs form a major three-dimensional habitat in deeper waters where little other ‘cover’ for fish is available. They are common in the eastern North Atlantic, and occur at least in the western North Atlantic and off central Africa. There are also other non-reef records of Lophelia in the Atlantic, and in Indian and Pacific oceans. Thus, not only are these reefs a significant habitat on a local scale, but they may also provide an important habitat over a very wide geographic scale. The present study examined the association of fish species with Lophelia in the Northeast Atlantic, including the Trondheimsfjord and Sula Ridge in Norway, Kosterfjord in Sweden, Darwin Mounds west of Scotland, and Rockall Bank, Rockall Trough and Porcupine Seabight off Ireland. The fish fauna associated with a shipwreck west of Shetland was also studied. Data were collected from 11 study sites at 8 locations, using 52 hours of video and 15 reels of still photographs. Video and still photographs were collected from (1) manned submersible, (2) surface controlled remotely operated vehicle (ROV), (3) a towed “hopper” camera, (4) wide angle survey photography (WASP), (5) seabed high resolution imaging platform (SHRIMP), and (6) an in situ time-lapse camera “Bathysnap”. It was possible to identify 90 % of fish observed to species level and 6.5 % to genus or family level. Only 3.5 % of the fish were not identifiable. A guide to the fishes is given at http://www.ecoserve.ie/projects/aces/. Twenty-five species of fishes from 17 families were recorded over all the sites, of which 17 were of commercial importance and comprised 82 % of fish individuals observed. These commercial fish species contribute 90 % of commercial fish tonnage in the North Atlantic. The habitats sampled were comprised of 19 % reef, 20 % transitional zone (i.e. between living coral and debris zone), 25 % coral debris and 36 % off-reef seabed. Depth was the most significant parameter in influencing the fish associated with the reefs, both at the species and family level. There was a complete separation of sites above and below 400–600 m depth by multi-dimensional scaling (MDS) analysis. Less distinct assemblages of fish species were associated with each habitat. Fish species richness and abundance was greater on the reef than surrounding seabed. In fact, 92 % of species, and 80 % of individual fish were associated with the reef. The present data indicates that these reefs have a very important functional role in deep-water ecosystems as fish habitat.
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  • 36
    Publication Date: 2017-06-28
    Description: Three new species of siphonophores (Rhodaliidae), a little known, uniquely benthic, family of Physonectae (Hydrozoa, Cnidaria), are described from specimens observed and collected at depths between 120 and 360 m off Indonesia and South Africa by the submersible JAGO. Special reference is made to in situ observations and video close‐ups that revealed detailed information on locomotory, fishing and feeding behaviour.
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  • 37
    Publication Date: 2017-06-07
    Description: Live-collected samples of four common reefbuilding coral genera (Acropora, Pocillopora, Goniastrea, Porites) from subtidal and intertidal settings of Heron Reef, Great Barrier Reef, show extensive early marine diagenesis where parts of the coralla less than 3 years old contain abundant macro- and microborings and aragonite, high-Mg calcite, low-Mg calcite, and brucite cements. Many types of cement are associated directly with microendoliths and endobionts that inhabit parts of the corallum recently abandoned by coral polyps. The occurrence of cements that generally do not precipitate in normal shallow seawater (e.g., brucite, low-Mg calcite) highlights the importance of microenvironments in coral diagenesis. Cements precipitated in microenvironments may not reXect ambient seawater chemistry. Hence, geochemical sampling of these cements will contaminate trace-element and stable-isotope inventories used for palaeoclimate and dating analysis. Thus, great care must be taken in vetting samples for both bulk and microanalysis of geochemistry. Visual inspection using scanning electron microscopy may be required for vetting in many cases.
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  • 38
    Publication Date: 2017-07-06
    Description: A method for attaching acoustic transmitters externally to deep-water fishes in situ is described. Tags, each comprising a transmitter connected to a dart, were fired at fish from a pneumatic gun held by the manipulator arm of a submersible. The method was applied successfully for tagging coelacanths and may have application for use with other species of fishes living at depths to about 1000 m. The usefulness of direct observation for monitoring the effects of tags on fish is evaluated in relation to the effects of the tagging method on coelacanths.
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  • 39
    Publication Date: 2017-10-06
    Description: Analysis of ten- and four-year datasets for the large, shallow, subtropical, and eutrophic Lakes Okeechobee (USA) and Taihu (China), respectively, suggest that resource-ratio explanations for cyanobacteria dominance may not apply to these two lakes. Datasets were examined to identify relationships between nutrient ratios [total nitrogen (TN):total phosphorus (TP) and ammonium (NH4+):oxidized N (NOx)] and phytoplankton community structure (as proportions of cyanobacteria and diatoms to total phytoplankton biomass). Datasets were pooled by sampling month, averaged lake-wide, and analyzed with linear regression. In Okeechobee, the cyanobacteria proportion increased and the diatom proportion decreased with increasing TN:TP. In Taihu, cyanobacteria decreased with increasing TN:TP, but the opposite trend observed for diatoms was marginally significant. Okeechobee cyanobacteria increased and diatoms decreased with increasing NH4+:NOx, but no significant relationships between phytoplankton and NH4+:NOx were observed in Taihu. Both lakes had significant relationships between phytoplankton community structure and total nutrients, but these relationships were the opposite of those expected. Relationships between phytoplankton community structure and water quality parameters from the previous month resulted in improved relationships, suggesting a predictive capability. Statistical analysis of the entire datasets (not pooled) supported these and additional relationships with other parameters, including temperature and water clarity.
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  • 40
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    In:  Environmental Technology, 18 . pp. 195-202.
    Publication Date: 2017-09-26
    Description: Plastic debris accumulates in the marine environment following its use in agricultural, industrial and social activities. Its ultimate fate is accomodation in sediments where it may persist for times up to centuries or longer. There appears to be an increasing flux of materials with time and an increased areal coverage of the benthos. Impacts upon bottom organisms can take many forms. Systematic monitoring tactics for the extent of seafloor coverage by plastics are yet to be incorporated into national programs.
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  • 41
    Publication Date: 2018-01-19
    Description: Species of the genus Hysterothylacium are among the most common marine nematode fish parasites in the northern Atlantic. Due to recent findings of cryptic speciation in other parasitic ascaridoid nematodes, a similar pattern of sibling species was hypothesized also for Hysterothylacium aduncum. By investigating a 886- to 890-bp-long genomic DNA fragment including ITS-1, 5.8S rDNA and ITS-2 of 40 specimens of H. aduncum of sprat (Sprattus sprattus) of four different biogeographical regions (North Sea, English Channel, Bay of Biscay, Adriatic Sea), we could not detect significant genetic variability and therefore cryptic speciation. Nevertheless, while ITS-1 and 5.8S rDNA sequences were identical for all analysed specimens, ITS-2 sequences showed a population-specific pattern with the differentiation of an English Channel/Bay of Biscay group from a North Sea/Mediterranean Sea group.
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  • 42
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    In:  Environmental Science and Pollution Research, 13 (6). pp. 406-413.
    Publication Date: 2019-09-23
    Description: Background: Halogenated compounds in the atmosphere are of great environmental concern due to their demonstrated negative effect on atmospheric chemistry and climate. Detailed knowledge of the emission budgets of halogenated compounds has to be gained to understand better their specific impact on ozone chemistry and the climate. Such data are also highly relevant to guide policy decisions in connexion with international agreements about protection of the ozone layer. In selected cases, the relevance of specific emission sources for certain compounds were unclear. In this study we present new and comprehensive evidence regarding the existence and relevance of a volcanic contribution of chlorofluorocarbons (CFCs), hydrofluorocarbons (HFCs), hydrochlorofluorocarbons (HCFCs), halons (bromine containing halo(hydro)carbons), and fully fluorinated compounds (e.g. CF4 and SF6) to the atmospheric budget. Methods: In order to obtain new evidence of a volcanic origin of these compounds, we collected repeatedly, during four field campaigns covering a period of two years, gases from fumaroles discharging over a wide range of temperatures at the Nicaraguan subduction zone volcanoes Momotombo, Cerro Negro and Mombacho, and analysed them with very sensitive GC/MS systems. Results and Discussion: In most fumarolic samples certain CFCs, HFCs, HCFCs, halons, and the fully fluorinated compounds CF4 and SF6 were present above detection limits. However, these compounds occur in the fumarole gases in relative proportions characteristic for ambient air. Conclusion: This atmospheric fingerprint can be explained by variable amounts of air entering the porous volcanic edifices and successively being incorporated into the fumarolic gas discharges. Recommendation and Outlook: Our results suggest that the investigated volcanoes do not constitute a significant natural source for CFCs, HFCs, HCFCs, halons, CF4, SF6 and NF3.
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  • 43
    Publication Date: 2017-03-22
    Description: A stable and specific bacterial community was shown to be associated with the Mediterranean sponge Chondrilla nucula. The associated bacterial communities were demonstrated to be highly similar for all studied specimens regardless of sampling time and geographical region. In addition, analysis of 16S rDNA clone libraries revealed three constantly C. nucula-associated bacterial phylotypes belonging to the Acidobacteria, the Gamma- and Deltaproteobacteria present in sponge specimens from two Mediterranean regions with distinct water masses (Ligurian Sea and Adriatic Sea). For the first time, candidate division TM7 bacteria were found in marine sponges. A major part (79%) of the C. nucula-derived 16S rDNA sequences were closely related to other sponge-associated bacteria. Phylogenetic analysis identified 14 16S rRNA gene sequence clusters, seven of which consisted of exclusively sponge-derived sequences, whereas the other seven clusters contained additional environmental sequences. This study adds to a growing database on the stability and variability of microbial consortia associated with marine sponges.
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  • 44
    Publication Date: 2019-09-23
    Description: Mombacho is a deeply dissected volcano belonging to the Quaternary volcanic chain of Nicaragua. The southern, historic collapse crater (El Crater) currently hosts a fumarolic field with a maximum temperature of 121°C. Chemical and isotopic data from five gas-sampling field campaigns carried out in 2002, 2003 and 2005 highlight the presence of high-temperature gas components (e.g. SO2, HCl and HF), which indicate a significant contribution of juvenile magmatic fluids to the hydrothermal system feeding the gas discharges. This is strongly supported by the mantle-derived helium and carbon isotopic signatures, although the latter is partly masked by either a sedimentary subduction-related or a shallow carbonate component. The observed chemical and isotopic composition of the Mombacho fluids seems to indicate that this volcanic system, although it has not experienced eruptive events during the last centuries, can be considered active and possibly dangerous, in agreement with the geophysical data recorded in the region. Systematic geochemical monitoring of the fumarolic gas discharges, coupled with a seismic and ground deformation network, is highly recommended in order to monitor a possible new eruptive phase.
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  • 45
    Publication Date: 2021-08-27
    Description: The concentration of trace elements within cephalopod statoliths can provide a record of the environmental characteristics at the time of calcification. To reconstruct accurately the environmental characteristics at the time of calcification, it is important to understand the influence of as many factors as possible. To test the hypothesis that the elemental composition of cuttlefish statoliths could be influenced by diet, juvenile Sepia officinalis were fed either shrimp Crangon sp. or fish Clupea harengus under equal temperature and salinity regimes in laboratory experiments. Element concentrations in different regions of the statoliths (core–lateral dome–rostrum) were determined using laser ablation inductively coupled plasma mass spectrometry (LA- ICPMS). The ratios of Sr/Ca, Ba/Ca, Mn/Ca and Y/Ca in the statolith’s lateral dome of shrimp-fed cuttlefish were significantly higher than in the statolith’s lateral dome of fish-fed cuttlefish. Moreover, significant differences between statolith regions were found for all analysed elements. The fact that diet adds a considerable variation especially to Sr/Ca and Ba/Ca must be taken into account in future micro-chemical statolith studies targeting cephalopod’s life history.
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  • 46
    Publication Date: 2020-06-12
    Description: Data from New Zealand and northern Victoria Land, Antarctica, indicate that the Cambrian Takaka Terrane intra-oceanic arc/backarc assemblage and the Bowers Terrane intra-oceanic arc/back-arc assemblage were accreted to the Gondwana margin by the Late Cambrian. Compelling similarities between the arc rocks and the immediate post-arc sediments firmly place the two regions in the same tectonic framework and imply close paleogeographic proximity. Currently, the Ross Orogen is thought to be the result of sinistral oblique convergence with west-directed subduction, and accretion of the arc assemblages is attributed to closure of backarc basins. Syntectonic fluvial conglomerates in both regions attest to the development of fluvial systems draining both the accreted arc and the contemporaneous continental margin arc. Trilobite faunas indicate that fluvial sedimentation commenced earlier in New Zealand than in northern Victoria Land. In the context of the widely accepted sinistral oblique convergence model, these data suggest an original position for New Zealand to the south of northern Victoria Land, probably in the region of the southern Ross Sea.
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  • 47
    Publication Date: 2016-09-19
    Description: The published mean δ34S values of ore-related pyrites from orogenic gold deposits of the Eastern Goldfields Province, Yilgarn Craton lie between −4‰ and +4‰. As for orogenic gold deposits worldwide, most deposits have positive means and a restricted range of δ34S values, but some have negative means and wider ranges of δ34S values. Wall-rock carbonation and back-mixing of similar-source fluids with different fluid pathways can explain some of the more negative δ34S signatures. However, structural setting appears to be the most important factor controlling ore-fluid oxidation state and hence the distribution of δ34S values in gold-related pyrites. Shear-hosted deposits appear to have experienced fluid-dominated processes such as phase separation, whereas stockwork, vein-hosted or disseminated deposits formed under conditions of greater rock buffering. At Victory-Defiance, in particular, negative δ34S values are more common in gently dipping dilational structures, compared to more compressional steeply dipping structures. It appears most likely that fluid-pressure fluctuations during fault-valve cycles establish different fluid-flow regimes in structures with different orientations. Rapid fluid-pressure fluctuations in dilational structures during seismic activity can cause partitioning of reduced gas phases from the ore fluid during extreme phase separation and hence are an effective method of ore-fluid oxidation, leading to large, local fluctuations in oxidation state. It is thus not necessary to invoke mixing with oxidised magmatic fluids to explain δ34S signatures indicative of oxidation. In any case, available, robust geochronology in the Eastern Goldfields Province does not support the direct involvement of oxidised magmatic fluids from adjacent granitic intrusions in orogenic gold genesis. Thus, negative mean δ34S values and large variations in δ34S values of ore-related pyrites in world-class orogenic gold deposits are interpreted to result from multiple mechanisms of gold precipitation from a single, ubiquitous ore fluid in varying structural settings, rather than from the involvement of oxidised ore fluids from a different source. Such signatures are indicative, but not diagnostic, of anomalously large orogenic gold systems.
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  • 48
    Publication Date: 2016-04-18
    Description: Fluxes of phosphate across the sediment–water interface have been measured using inhibitors of bacterial activity sterilization and chloramphenicol and a control in order to quantify the influence of bacterial abundance on them. Results show that phosphate concentration in the interstitial water decreased when bacteria were present, in relation to treated aquaria. The measured (Jo) and theoretical fluxes (Jd) of phosphate also were higher when bacterial activity was suppressed. Mass balance calculated for Carbon, Nitrogen and Phosphorus in the sediment revealed a loss of theses compounds when bacterial activity was suppressed, and a net accumulation of Carbon and Phosphorus, and loss of Nitrogen under natural conditions.
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  • 49
    Publication Date: 2016-05-13
    Description: Sediments of upwelling regions off Namibia, Peru, and Chile contain dense populations of large nitrate-storing sulfide-oxidizing bacteria, Thiomargarita, Beggiatoa, and Thioploca. Increased contents of monounsaturated C16 and C18 fatty acids have been found at all stations studied, especially when a high density of sulfide oxidizers in the sediments was observed. The distribution of lipid biomarkers attributed to sulfate reducers (10MeC16:0 fatty acid, ai-C15:0 fatty acid, and mono-O-alkyl glycerol ethers) compared to the distribution of sulfide oxidizers indicate a close association between these bacteria. As a consequence, the distributions of sulfate reducers in sediments of Namibia, Peru, and Chile are closely related to differences in the motility of the various sulfide oxidizers at the three study sites. Depth profiles of mono-O-alkyl glycerol ethers have been found to correlate best with the occurrence of large sulfide-oxidizing bacteria. This suggests a particularly close link between mono-O-alkyl glycerol ether-synthesizing sulfate reducers and sulfide oxidizers. The interaction between sulfide-oxidizing bacteria and sulfate-reducing bacteria reveals intense sulfur cycling and degradation of organic matter in different sediment depths.
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  • 50
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    In:  Environmental Technology, 27 (8). pp. 909-921.
    Publication Date: 2016-04-20
    Description: A variety of methods were successfully applied to examine the efficacy of a modular ballast water system according to the standards as adopted by the International Maritime Organization. The ballast water treatment system had a capacity of 530 m3 h−1 consisted of a pump system, a hydrocyclone, a 50 μm mesh-size self-cleaning filter and an installation for the addition of a chemical disinfectant (PERACLEAN® Ocean). The land-based testing facility used natural sea water of high turbidity during the spring phytoplankton bloom. The mesozooplankton fraction was inspected with a standard binocular. Larger zooplankton were effectively removed with the filter; the smaller sized fraction containing larvae and nauplia were killed after chemical treatment. The phytoplankton component was monitored using flow cytometry. The huge colonies of the phytoplankton Phaeocystis globosa were disrupted in the hydrocyclone liberating the colony cells which passed as single cells through the filter. These cells remained viable but were finally killed in the secondary (chemical) step. Bacteria also passed all mechanical treatment steps unharmed but were killed in the final step. Viability tests with SYTOX Green, which were specifically designed for phytoplankton, showed that mechanical treatment did not affect the percentage of viable cells a short-term, but after several hours the viable cell counts dropped down to 70%. Phytoplankton cells recovered within a single day and formed a new dense bloom rapidly. The bacteriostatic component of the chemical disinfectant (H2O2) remained present for several days preventing regrowth of bacteria for up to 15 days after addition. In conclusion, the IMO standards were met using the modular ballast water treatment unit and the applied instruments and assays were effective and rapid tools to qualify and quantify the organisms present as well as their viability.
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  • 51
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    In:  In: Land-Ocean Systems in the Siberian Arctic : Dynamica and History. , ed. by Kassens, H., Bauch, H. A., Dmitrenko, I. A. and Eicken, H. Springer, Berlin (u.a.), pp. 693-711. ISBN 3-540-65676-6
    Publication Date: 2015-03-31
    Description: Russian and German scientists have investigated the extreme environmental system in and around the Laptev Sea in the Siberian Arctic. For the first time a major comprehensive research program combining the efforts of several projects addressed both oceanic and terrestrial processes, and their consequences for marine and terrestrial biota, landscape evolution as well as land-ocean interactions. The primary scientific goal of the multidisciplinary program was to decipher past climate variations and their impact on contemporary environmental changes. Extensive studies of the atmosphere, sea ice, water column, and sea-floor on the Laptev Sea Shelf, as well as of the vegetation, soil development, carbon cycle, permafrost behaviour and lake hydrology, and sedimentationon Taymyr Peninsula and Severnaya Zemlya Archipelago were performed during the past years under a framework of joint research activities. They included land and marine expeditions during spring (melting), summer (ice free), and autumn (freezing) seasons. The close bilateral cooperation between many institutions in Russia and Germany succeeded in drawing a picture of important processes shaping the marine and terrestrial environment in northern Central Siberia in Late Quaternary time. The success of the projects, which ended in late 1997, resulted in the definition and establishment of a new major research effort which will concentrate on establishing a better understanding of the paleoclimatic and paleoenvironmental record of the area. This is important because it allows to be able to judge rates and extremes of potential future environmental changes.
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  • 52
    Publication Date: 2015-01-22
    Description: Thermoterraces in syngenetic ice complexes are widespread along the erosion dominated Yakutia Arctic coast. Thermoterraces progressively record quantitative information about their existence, which may be used to determine the mean shore retreat rate during the time they are present. Initial measurements of four thermoterraces on the south coast of the Dmitry Laptev Strait were carried out by the authors in 2002 and shore retreat rates were calculated. Comparison of erosion rates obtained using thermoterrace dimensions and geodetic survey results with those determined using aerial photographs showed that erosion rate values obtained in these two ways are approximately of the same order.
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  • 53
    Publication Date: 2018-05-29
    Description: Analogue experiments in part I led to the conclusion that pyroclastic flows depositing very highgrade ignimbrite move as dilute suspension currents. In the thermo–fluid–dynamical model developed, the degree of cooling of expanded turbulent pyroclastic flows dynamically evolves in response to entrainment of air and mass loss to sedimentation. Initial conditions of the currents are derived from column-collapse modeling for magmas with an initial H2O content of 1–3 wt.% erupting through circular vents and caldera ring-fissures. The flows spread either longitudinally or radially from source up to a runout distance that increases with higher mass flux but decreases with higher gas content, temperature, bottom slope and coarser initial grain size. Progressive dilution by entrainment and sedimentation causes pyroclastic currents to transform into buoyant ash plumes at the runout distance. The ash plumes reach stratospheric heights and distribute 30–80% of the erupted material as widespread co-ignimbrite ash. Pyroclastic suspension currents with initial mass fluxes of 107-1012 kg/s can spread for tens of kilometers with only limited cooling, although they move as supercritical, strongly entraining currents for the eruption conditions considered here. With increasing eruption mass flux, cooling during passage through the fountain diminishes while cooling during flow transport increases. The net effect is that eruption temperature exerts the prime control on emplacement temperature. Pyroclastic suspension currents can form welded ignimbrite across their entire extent if eruption temperature is To11.3.Tmw, the minimum welding temperature. High eruption rates, a large fraction of fine ash, and a ring-fissure vent favor the formation of extensive high-grade ignimbrite. For very hot eruptions produc ing sticky, partially molten pyroclasts, analysis of particle aggregation systematics shows that factors favoring longer runout also favor more efficient aggregation, which reduces runout. As a result, very high-grade ignimbrites cannot spread more than a few tens of kilometers from their source. In cooler pyroclastic currents, particles do not aggregate, and the sedimentation process may involve re-entrainment of particles, which potentially leads to more extensive cooling and longer runout; such effects, however, are only significant when net erosion of substrate occurs. Model results can be employed to estimate mass flux and duration of ignimbrite eruptions from measured ignimbrite masses and aspect ratios. The model also provides an alternative explanation of the observed decrease in H/Lratios with ignimbrite mass.
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  • 54
    Publication Date: 2017-08-09
    Description: The construction of S-wave velocity models of marine sediments down to hundreds of meters below the seafloor is important in a number of disciplines. One of the most significant trends in marine geophysics is to use interface waves to estimate shallow shear velocities which play an important role in determining the shallow crustal structure. In marine settings, the waves trapped near the fluid-solid interface are called Scholte waves, and this is the subject of the study. In 1998, there were experiments on the Ninetyeast Ridge (Central Indian Ocean) to study the shallow seismic structure at the drilled site. The data were acquired by both ocean bottom seismometer and ocean bottom hydrophone. A new type of seafloor implosion sources has been used in this experiment, which successfully excited fast and high frequency (> 500 Hz) body waves and slow, intermediate frequency (〈 20 Hz) Scholte waves. The fundamental and first higher mode Scholte waves have both been excited by the implosion source. Here, the Scholte waves are investigated with a full waveform modeling and a group velocity inversion approach. Shear wave velocities for the uppermost layers of the region are inferred and results from the different methods are compared. We find that the full waveform modeling is important to understand the intrinsic attenuation of the Scholte waves between 1 and 20 Hz. The modeling shows that the S-wave velocity varies from 195 to 350 m/s in the first 16 m of the uppermost layer. Depths levels of high S-wave impedance contrasts compare well to the layer depth derived from a P-wave analysis as well as from drilling data. As expected, the P- to S-wave velocity ratio is very high in the uppermost 16 m of the seafloor and the Poisson ratio is nearly 0.5. Depth levels of high S-wave impedance contrasts are comparable to the layer depth derived from drilling data.
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  • 55
    facet.materialart.
    Unknown
    Springer
    In:  In: High Performance Computing in Science and Engineering 08. , ed. by Nagel, W. E. Springer, Berlin, pp. 471-479.
    Publication Date: 2012-02-23
    Type: Book chapter , PeerReviewed
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  • 56
    facet.materialart.
    Unknown
    Taylor & Francis
    In:  Tellus B: Chemical and physical meteorology, 51 (2). pp. 461-476.
    Publication Date: 2016-06-14
    Description: The assessment of direct effects of anthropogenic CO2 increase on the marine biota has received relatively little attention compared to the intense research on CO2-related responses of the terrestrial biosphere. Yet, due to the rapid air–sea gas exchange, the observed past and predicted future rise in atmospheric CO2 causes a corresponding increase in seawater CO2 concentrations, [CO2], in upper ocean waters. Increasing [CO2] leads to considerable changes in the surface ocean carbonate system, resulting in decreases in pH and the carbonate concentration, [CO2−3]. These changes can be shown to have strong impacts on the marine biota. Here we will distinguish between CO2-related responses of the marine biota which (a) potentially affect the ocean's biological carbon pumps and (b) are relevant to the interpretation of diagnostic tools (proxies) used to assess climate change on geological times scales. With regard to the former, three direct effects of increasing [CO2] on marine plankton have been recognized: enhanced phytoplankton growth rate, changing elemental composition of primary produced organic matter, and reduced biogenic calcification. Although quantitative estimates of their impacts on the oceanic carbon cycle are not yet feasible, all three effects increase the ocean's capacity to take up and store atmospheric CO2 and hence, can serve as negative feedbacks to anthropogenic CO2 increase. With respect to proxies used in palaeo-reconstructions, CO2-sensitivity is found in carbon isotope fractionation by phytoplankton and foraminifera. While CO2- dependent isotope fractionation by phytoplankton may be of potential use in reconstructing surface ocean pCO2 at ancient times, CO2-related effects on the isotopic composition of foraminiferal shells confounds the use of the difference in isotopic signals between planktonic and benthic shells as a measure for the strength of marine primary production. The latter effect also offers an alternative explanation for the large negative swings in δ13C of foraminiferal calcite between glacial and interglacial periods. Changes in [CO2−3] affect the δ18O in foraminiferal shells. Taking this into account brings sea surface temperature estimates for the glacial tropics closer to those obtained from other geochemical proxies.
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  • 57
    Publication Date: 2018-01-19
    Description: We investigated the effect of commercially available enzymes (α-amylase, α-galactosidase, papain, trypsin, and lipase) as well as proteases from deep-sea bacteria on the larval attachment of the bryozoan Bugula neritina L. The 50% effective concentrations (EC50) of the commercial proteases were 10 times lower than those of other enzymes. Crude proteases from six deep-sea Pseudoalteromonas species significantly decreased larval attachment at concentrations of 0.03 to 1 mIU ml−1. The EC50 of the pure protease from the bacterium Pseudoalteromonas issachenkonii UST041101-043 was close to 1 ng ml−1 (0.1 mIU ml−1). The protease and trypsin individually incorporated in a water-soluble paint matrix inhibited biofouling in a field experiment. There are certain correlations between production of proteases by bacterial films and inhibition of larval attachment. None of the bacteria with biofilms that induced attachment of B. neritina produced proteolytic enzymes, whereas most of the bacteria that formed inhibitive biofilms produced proteases. Our investigation demonstrated the potential use of proteolytic enzymes for antifouling defense.
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  • 58
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    Unknown
    Springer
    In:  In: The South Atlantic: Present and Past Circulation. , ed. by Wefer, G., Berger, W. H., Siedler, G. and Webb, D. J. Springer, Berlin, Heidelberg, pp. 125-162.
    Publication Date: 2020-01-10
    Type: Book chapter , PeerReviewed
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  • 59
    Publication Date: 2021-08-27
    Description: We have applied the novel analytical method NanoSIMS to cephalopod statoliths for the first time in order to analyse their chemical microstructure, using a spatial resolution of 400 nm. This technique makes it possible to analyse in situ nano-scale chemical variations between increment layers. In statoliths of the boreoatlantic armhook squid Gonatus fabricii, we found distinct concentration patterns indicating a periodicity in strontium and sodium distributions. Sr and Na show a negative relation, both elements showing alternating patterns where the increments vary in width between approximately 1 and 5 μm. Results suggest, that aragonite deposited during the night is rich in Na and poor in Sr, while aragonite deposited during the day is rich in Sr and poor in Na. This study demonstrates the excellent suitability of NanoSIMS for nano-scale microchemical analyses of aragonite, providing new information on calcification processes and individual life histories. Possible future fields of application include not only cephalopod statoliths, but also virtually all biomineralized tissues in aquatic organisms like fish otoliths, gastropod statoliths, bivalve shells, foraminifers and corals.
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  • 60
    facet.materialart.
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    Taylor & Francis
    In:  Tellus A: Dynamic meteorology and oceanography, 57 (3). pp. 340-356.
    Publication Date: 2016-06-15
    Description: A simple method for initializing coupled general circulation models (CGCMs) using only sea surface temperature (SST) data is comprehensively tested in an extended set of ensemble hindcasts with the Max-Planck-Institute (MPI) climate model, MPI-OM/ECHAM5. In the scheme, initial conditions for both atmosphere and ocean are generated by running the coupled model with SST nudged strongly to observations. Air–sea interaction provides the mechanism through which SST influences the subsurface. Comparison with observations indicates that the scheme is performing well in the tropical Pacific. Results from a 500-yr control run show that the model's El Niño Southern Oscillation (ENSO) variability is quite realistic, in terms of strength, structure and period. The hindcasts performed were six months long, initiated four times per year, consisted of nine ensemble members, and covered the period 1969–2001. The ensemble was generated by only varying atmospheric initial conditions, which were sampled from the initialization run to capture intraseasonal variability. At six-month lead, the model is able to capture all the major ENSO extremes of the period. However, because of poor sampling of ocean initial conditions and model deficiencies, the ensemble-mean anomaly correlation skill for Niño3 SST is only 0.6 at six-month lead. None the less, the results presented here demonstrate the potential of such a simple scheme, and provide a simple method by which SST information may be better used in more complex initialization schemes.
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  • 61
    Publication Date: 2019-09-23
    Description: An indoor mesocosm system was set up to study the response of phytoplankton and zooplankton spring succession to winter and spring warming of sea surface temperatures. The experimental temperature regimes consisted of the decadal average of the Kiel Bight, Baltic Sea, and three elevated regimes with 2°C, 4°C, and 6°C temperature difference from that at baseline. While the peak of the phytoplankton spring bloom was accelerated only weakly by increasing temperatures (1.4 days per degree Celsius), the subsequent biomass minimum of phytoplankton was accelerated more strongly (4.25 days per degree Celsius). Phytoplankton size structure showed a pronounced response to warming, with large phytoplankton being more dominant in the cooler mesocosms. The first seasonal ciliate peak was accelerated by 2.1 days per degree Celsius and the second one by 2.0 days per degree Celsius. The over-wintering copepod populations declined faster in the warmer mesocosm, and the appearance of nauplii was strongly accelerated by temperature (9.2 days per degree Celsius). The strong difference between the acceleration of the phytoplankton peak and the acceleration of the nauplii could be one of the “Achilles heels” of pelagic systems subject to climate change, because nauplii are the most starvation-sensitive life cycle stage of copepods and the most important food item of first-feeding fish larvae.
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  • 62
    Publication Date: 2017-02-01
    Description: In 2000, the Carbon Dioxide in the Ocean working group of the North Pacific Marine Science Organization (PICES) performed an international experiment on the intercalibration of the measurements of the total alkalinity in seawater using certified reference materials (CRM). Taking part in this experiment, Russian specialists presented the method by Bruevich. The results of the intercalibration showed that the alkalinity values obtained by Bruevich's method using modern burettes, an Na2CO3 reactant of high purity as a standard to ascertain the acid titre, and corrections for the acid density and for the weights of the acid and seawater samples in vacuum are in agreement with the standard within +/- 1 mu M/kg.
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  • 63
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    In:  In: High Performance Computing in Science and Engineering '08. Springer, Heidelberg, pp. 471-477613. ISBN 978-3-540-88301-2
    Publication Date: 2019-09-23
    Type: Book chapter , PeerReviewed
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  • 64
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    Springer
    In:  In: Target Pattern Recognition in Innate Immunity. Advances in Experimental Medicine and Biology, 653 . Springer, Heidelberg, pp. 35-47. ISBN 978-1-4419-0900-8
    Publication Date: 2013-02-18
    Description: NOD-like receptors (NLRs) exert pivotal roles in innate immunity as sensors of exogenous or endogenous cellular danger signals. The NLR protein family has a characteristic domain architecture comprising a central nucleotide binding and oligomerization domain (NOD), an N-terminal effector binding domain and C-terminal leucine-rich repeats (LRRs). Mutations in NLR genes are genetically associated with a number of chronic inflammatory diseases of barrier organs. In this chapter, we focus on the influence of NLR regulation and function in the complex pathophysiology of mucosal homeostasis. The understanding of NLR biology may guide our future understanding of how the interaction between the human genome and the metagenome of transient and resident microbiota precipitates into chronic inflammatory disorders, such as Crohn's disease or atopy.
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  • 65
    facet.materialart.
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    Taylor & Francis
    In:  South African Journal of Marine Science, 20 . pp. 421-428.
    Publication Date: 2019-01-24
    Description: The capture of 52 specimens of the cirrate octopod Grimpoteuthis glacialis (Robson, 1930), of dorsal mantle length 20-165 mm during a 1996 trawling survey near the Antarctic Peninsula allowed the basic biology of the species to be examined. Their presence in bottom trawls at depths of 333-879 m, but their absence from benthopelagic and pelagic trawls, is consistent with a primarily benthic habitat. The largest single sample, 40 animals, came from a soft mud bottom and highlights the patchy nature of the distribution. Males tended to be bigger in total length and mass than females of similar mantle length. The males, however, were mature at a smaller size. Mature males have tiny sperm packets, rather than typical cephalopod spermatophores, in their distal reproductive tract. Mature females have large, smooth eggs in the proximal oviduct, in the huge oviducal gland and in the distal oviduct. Eggs in the distal oviduct have a thick, sticky coating that hardens in seawater into a secondary egg case. Ovarian eggs vary greatly in size, possibly indicating protracted egg laying. Observations on live animals indicate that the species swims primarily by fin action, rather than by jetting or medusoid pulses with the arm/web complex. It may be capable of limited changes in colour pattern, especially on the oral surface of the web. Three pairs of surface structures that appear superficially to be white spots anterior to the eyes and near the bases of the fins are actually transparent patches in the skin. When considered in association with the transparent subdermal layer and the anatomy of the eyes, optic nerves and optic lobes, these clear patches seem to function in detecting unfocused light on the horizontal plane of the benthic animal.
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  • 66
    Publication Date: 2016-09-22
    Description: Fabric and growth mode of deep-water isidid gorgonian skeletons showing bright Mg-calcitic internodes and dark proteinageous nodes were investigated on modern, subrecent and fossil skeletons. The internodial microstructure is characterised by three-dimensionally interfingering calcitic fascicles accreting around a central axis. Macroscopic colour banding results from varying orientations of organic-rich fascicle bundles and intercalated bands of organic-poor granular crystals. This skeletal structure of isidid gorgonians strikingly differs from the density banding of scleractinians. Radiocarbon dating of a fossil skeleton gave an age of 3,985±35 to 3,680±35 years before present (BP) with a record of 305±35 years (±range). Linear extension rates of 0.4 mm year−1 average allow for an annual to sub-annual resolution on micrometer scale of colour bands or fascicles, respectively. The growth mode of branched skeletons is characterised by simultaneous secretion of vertically alternating nodes/internodes and lateral accretion of concentric increments enveloping the entire skeleton. Bifurcations at various growth stages imply that adjacent branches have different ages and show varying numbers of growth bands at any skeletal cross section. The scleroprotein gorgonin plays a crucial role in the formation of organic nodes and the secretion of calcitic internodes by providing a structural framework in the biomineralisation process.
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  • 67
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    Springer
    In:  In: Offshore wind energy : research on environmental impacts. , ed. by Köller, J., Köppel, J. and Peters, W. Springer, Heidelberg, pp. 65-75.
    Publication Date: 2012-02-23
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  • 68
    facet.materialart.
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    Springer
    In:  Helgoland Marine Research, 59 . pp. 71-83.
    Publication Date: 2018-05-28
    Description: Humans have interacted with the Wadden Sea since its origin 7,500 years ago. However, exploitation, habitat alteration and pollution have strongly increased since the Middle Ages, affecting abundance and distribution of many marine mammals, birds, fish, invertebrates and plants. Large whales and some large birds disappeared more than 500 years ago. Most small whales, seals, birds, large fish and oysters were severely reduced by the late 19th and early 20th centuries, leading to the collapse of several traditional fisheries. In the 20th century, conservation efforts have enabled some breeding birds and seals to recover. But other species declined further due to continuing exploitation, habitat destruction, pollution and eutrophication. Moreover, complex three-dimensional habitats such as oyster banks, Sabellaria reefs and subtidal eelgrass beds have been lost completely. In contrast, several opportunistic species such as gulls, polychaetes, green algae and exotic invaders increased during the 20th century. Taken together, multiple human impacts have caused dramatic losses of large predators and habitat-building species in the Wadden Sea over the last 500 years. Although still of high natural value and global importance, the Wadden Sea is a fundamentally changed ecosystem. On the other hand, reduced hunting pressure, increased habitat protection and reduced river pollution have enabled the recent recovery of several species and an increase in environmental quality. These successes, together with a historical vision of what was once possible, should guide current and future conservation, restoration and management efforts towards a more sustainable interaction between man and the sea.
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  • 69
    Publication Date: 2019-08-06
    Description: Todayrsquos Wadden Sea is a heavily human-altered ecosystem. Shaped by natural forces since its origin 7,500 years ago, humans gradually gained dominance in influencing ecosystem structure and functioning. Here, we reconstruct the timeline of human impacts and the history of ecological changes in the Wadden Sea. We then discuss the ecosystem and societal consequences of observed changes, and conclude with management implications. Human influences have intensified and multiplied over time. Large-scale habitat transformation over the last 1,000 years has eliminated diverse terrestrial, freshwater, brackish and marine habitats. Intensive exploitation of everything from oysters to whales has depleted most large predators and habitat-building species since medieval times. In the twentieth century, pollution, eutrophication, species invasions and, presumably, climate change have had marked impacts on the Wadden Sea flora and fauna. Yet habitat loss and overexploitation were the two main causes for the extinction or severe depletion of 144 species (~20% of total macrobiota). The loss of biodiversity, large predators, special habitats, filter and storage capacity, and degradation in water quality have led to a simplification and homogenisation of the food web structure and ecosystem functioning that has affected the Wadden Sea ecosystem and coastal societies alike. Recent conservation efforts have reversed some negative trends by enabling some birds and mammals to recover and by creating new economic options for society. The Wadden Sea history provides a unique long-term perspective on ecological change, new objectives for conservation, restoration and management, and an ecological baseline that allows us to envision a rich, productive and diverse Wadden Sea ecosystem and coastal society.
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  • 70
    Publication Date: 2017-06-29
    Description: Hydrothermal activity in the Central Bransfield Basin revealed an active low-temperature vent field on top of a submarine volcanic structure. A temperature anomaly was detected and the sea floor showed various patches of white silica (opal-A) precipitate exposures and some yellow–brown Fe-oxyhydroxide crusts. Enriched dissolved methane concentrations were encountered. Sediment was near 24°C just after the grab came on deck. No dense population of chemosynthetically based macrofauna known from other hydrothermal venting areas was present, except for pogonophora. The observations suggest that the sedimented hydrothermal field at Hook Ridge is a low-temperature end-member branch from a deeper hydrothermal source.
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  • 71
    Publication Date: 2016-09-13
    Description: During the twentieth century sea surface temperatures in the Atlantic Ocean exhibited prominent multidecadal variations. The source of such variations has yet to be rigorously established—but the question of their impact on climate can be investigated. Here we report on a set of multimodel experiments to examine the impact of patterns of warming in the North Atlantic, and cooling in the South Atlantic, derived from observations, that is characteristic of the positive phase of the Atlantic Multidecadal Oscillation (AMO). The experiments were carried out with six atmospheric General Circulation Models (including two versions of one model), and a major goal was to assess the extent to which key climate impacts are consistent between the different models. The major climate impacts are found over North and South America, with the strongest impacts over land found over the United States and northern parts of South America. These responses appear to be driven by a combination of an off-equatorial Gill response to diabatic heating over the Caribbean due to increased rainfall within the region and a Northward shift in the Inter Tropical Convergence Zone (ITCZ) due to the anomalous cross-equatorial SST gradient. The majority of the models show warmer US land temperatures and reduced Mean Sea Level Pressure during summer (JJA) in response to a warmer North Atlantic and a cooler South Atlantic, in line with observations. However the majority of models show no significant impact on US rainfall during summer. Over northern South America, all models show reduced rainfall in southern hemisphere winter (JJA), whilst in Summer (DJF) there is a generally an increase in rainfall. However, there is a large spread amongst the models in the magnitude of the rainfall anomalies over land. Away from the Americas, there are no consistent significant modelled responses. In particular there are no significant changes in the North Atlantic Oscillation (NAO) over the North Atlantic and Europe in Winter (DJF). Additionally, the observed Sahel drying signal in African rainfall is not seen in the modelled responses. Suggesting that, in contrast to some studies, the Atlantic Multidecadal Oscillation was not the primary driver of recent reductions in Sahel rainfall.
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  • 72
    Publication Date: 2019-09-23
    Description: The genes and intergenic regions of the amoCAB operon were analyzed to establish their potential as molecular markers for analyzing ammonia-oxidizing betaproteobacterial (beta-AOB) communities. Initially, sequence similarity for related taxa, evolutionary rates from linear regressions, and the presence of conserved and variable regions were analyzed for all available sequences of the complete amoCAB operon. The gene amoB showed the highest sequence variability of the three amo genes, suggesting that it might be a better molecular marker than the most frequently used amoA to resolve closely related AOB species. To test the suitability of using the amoCAB genes for community studies, a strategy involving nested PCR was employed. Primers to amplify the whole amoCAB operon and each individual gene were tested. The specificity of the products generated was analyzed by denaturing gradient gel electrophoresis, cloning, and sequencing. The fragments obtained showed different grades of sequence identity to amoCAB sequences in the GenBank database. The nested PCR approach provides a possibility to increase the sensitivity of detection of amo genes in samples with low abundance of AOB. It also allows the amplification of the almost complete amoA gene, with about 300 bp more sequence information than the previous approaches. The coupled study of all three amo genes and the intergenic spacer regions that are under different selection pressure might allow a more detailed analysis of the evolutionary processes, which are responsible for the differentiation of AOB communities in different habitats.
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  • 73
    Publication Date: 2018-06-06
    Description: Investigations of factors affecting feeding success in fish larvae require knowledge of the scales of variability of the feeding process itself and the indices used to assess this variability. In this study, we measured short-term (diel) variability in feeding rates of wild haddock (Melanogrammus aeglifinus) larvae four times per day during a 10-d cruise in the northern North Sea. Feeding activity was evaluated using indices of gut fullness, prey digestive state and biochemical measurements (tryptic enzyme activity). The gut fullness and the enzyme activity indices indicated moderate to high rates of food consumption throughout the cruise. Time series analysis of the three indices showed significant diel variability in all indices and enabled identification of significant lags between food uptake and peak digestive enzyme activity. The typical pattern of food consumption and digestion was characterized by maximal ingestion of prey early in the evening (19:00 hrs) and peak digestive enzyme activity at 01:00 hrs. The time scale over which enzyme activities reacted to prey ingestion was ca. 6 h, and is consistent with expectations from controlled laboratory experiments with other larval fish species. Significant diel variability in tryptic enzyme activity suggests that attempts to relate this measure of feeding success to other variables (e.g. food concentrations) should take care to accommodate natural cycles in feeding activity before making statistical comparisons.
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  • 74
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    Springer
    In:  Polar Biology, 29 . pp. 169-178.
    Publication Date: 2021-08-27
    Description: We examined 323 cephalopods collected by bottom trawl from depths between 162 and 536 m near Disko island, West Greenland. The most abundant species were the boreoatlantic armhook squid Gonatus fabricii, the sepiolid Rossia moelleri and the spoonarm octopus Bathypolypus arcticus. From this sampling we provide new information on the population structure, bathymetric distribution and the reproductive biology of cephalopods from this area. Special emphasis is given to the sepiolid R. moelleri, for which the life cycle is proposed. Further, this study provides new relationships of beak size to mantle length and wet body mass for G. fabricii, R. moelleri and B. arcticus.
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  • 75
    Publication Date: 2018-06-07
    Description: Small cephalopods of the genus Heteroteuthis are the most pelagic members in the family Sepiolidae. This study examines the reproductive biology of Heteroteuthis dispar (Rüppell, 1844), the first such study on any member of the genus, based on 46 specimens (27 females and 19 males) collected during the Mar-Eco cruise in the North Atlantic in the region of the Mid-Atlantic Ridge in 2004, and compares it with reproductive features in the less pelagic members of the family. The unusually large spermatophores of the males have a very small ejaculatory apparatus and cement body, relative to the size of the sperm mass. Females first mate when they are still maturing: a large sperm mass (up to 3.4% of the female body mass), consisting of one to several spermatangia, was found in an internal seminal receptacle of the majority of the females examined regardless of their maturity state. The seminal receptacle has a unique form and position in this species. The receptacle is a thin-walled sac at the posterior end of the visceral mass that is an outpocketing of, and opens into, the visceropericardial coelom. Spermatangia and sperm from the spermatangia apparently enter into the visceropericardial coelom (which is mostly occupied by the ovary) from the seminal receptacle indicating that ova are fertilised internally, a strategy unknown for decapodiform cephalopods (squid and cuttlefish), but present in most octopods. Fecundity of Heteroteuthis dispar (1,100–1,300 oocytes) is much higher than in other sepiolids whereas the egg size (mean max. length ∼1.6 mm) is the smallest within the family. Spawning is continuous (sensu Rocha et al. in Biol Rev 76:291–304, 2001). These and other reproductive traits are discussed as being adaptations to an oceanic lifestyle.
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  • 76
    Publication Date: 2019-07-03
    Description: Stable isotope signatures of primary producers display high inter- and intraspecific variation. This is assigned to species-specific differences in isotope fractionation and variable abiotic conditions, e.g., temperature, and nutrient and light availability. As consumers reflect the isotopic signature of their food source, such variations have direct impacts on the ecological interpretation of stable isotope data. To elucidate the variability of isotope fractionation at the primary producer level and the transfer of the signal through food webs, we used a standardised marine tri-trophic system in which the primary producers were manipulated while the two consumer levels were kept constant. These manipulations were (1) different algal species grown under identical conditions to address interspecific variability and (2) a single algal species cultivated under different nutrient regimes to address nutrient-dependent variability. Our experiments resulted in strong interspecific variation between different algal species (Thalassiosira weissflogii, Dunaliella salina, and Rhodomonas salina) and nutrient-dependent shifts in stable isotope signatures in response to nutrient limitation of R. salina. The trophic enrichment in 15N and 13C of primary and secondary consumers (nauplii of Acartia tonsa and larval herring) showed strong deviations from the postulated degree of 1.0‰ enrichment in δ13C and 3.4‰ enrichment in δ15N. Surprisingly, nauplii of A. tonsa tended to keep “isotopic homeostasis” in terms of δ15N, a pattern not described in the literature so far. Our results suggest that the diets’ nutritional composition and food quality as well as the stoichiometric needs of consumers significantly affect the degree of trophic enrichment and that these mechanisms must be considered in ecological studies, especially when lower trophic levels, where variability is highest, are concerned.
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  • 77
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    In:  Toxicology and Environmental Health Sciences, 1 (2). pp. 92-96.
    Publication Date: 2016-05-24
    Description: Semi Permeable Membrane Device (SPMD) was deployed on an experimental basis for five days inside an Environmental Chemistry Laboratory and two sites outside the building in Kiel, Germany to understand the time-averaged contaminant profiles and concentrations of PCBs. Multi Dimensional High Resolution Gas Chromatography-Electron Capture Detection technique and high resolution clean up techniques were employed to SPMD derived triolein samples. Air concentrations were derived from well established mass transfer coefficients or rate constants for PCBs in SPMD. PCBs profiles in indoor and outdoor samples were distinctly different, exemplified by a particle free clean-up laboratory facility where particle associated higher chlorinated congeners were absent. SPMDs revealed the ‘occupational hazard’ to workers inside the building from chemical contamination derived from both building materials and chemicals used in the laboratory. Finger printing technique using principle component analysis (PCA) revealed that PCB contamination was derived from German commercial PCB mixtures. SPMD derived air concentrations in outdoor samples resembled levels recorded by similar devices in Europe. Ultimately, a simple sampling technique in combination with high resolution analytical techniques demonstrated the uptake of more than 60 PCB congeners within a short period of time.
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  • 78
    Publication Date: 2016-09-13
    Description: Cyclone activity and life cycle are analysed in the coupled GCMs ECHAM5/OM and ECHAM4/OPYC3. First, the results for the present climate (1978–1999) are compared with ERA-40 and NCEP/NCAR reanalyses, showing a drastic improvement in the representation of cyclone activity in ECHAM5/OM compared to ECHAM4/OPYC3. The total number of cyclones, cyclone intensity, propagation velocity and deepening rates are found to be much more realistic in ECHAM5/OM relative to ECHAM4/OPYC3. Then, changes in extra tropical cyclone characteristics are compared between present day climate and future climate under the emission-scenario A1B using ECHAM5/OM. This comparison is performed using the 20-year time slices 1978–1999, 2070–2090 and 2170–2190, which were considered to be representative for the various climate conditions. The total number of cyclones does not undergo significant changes in a warmer climate. However, regional changes in cyclone numbers and frequencies are evident. One example is the Mediterranean region where the number of cyclones in summer increases almost by factor 2. Some noticeable changes are also found in cyclone life cycle characteristics (deepening rate and propagation velocity). Cyclones in the future climate scenario tend to move slower and their deepening rate becomes stronger, while cyclone intensity does not undergo significant change in a warmer climate. Generally, our results do not support the hypothesis of enhanced storminess under future climate conditions
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  • 79
    Publication Date: 2017-05-18
    Description: Facies analysis, fossil dating, and the study of the metamorphism in the Late Triassic to Early Cretaceous sedimentary successions in the central part of the Northern Calcareous Alps allow to reconstruct the tectonic evolution in the area between the South Penninic Ocean in the northwest and the Tethys Ocean with the Hallstatt Zone in the southeast. The Triassic as well as the Early and Middle Jurassic sediments were deposited in a rifted, transtensive continental margin setting. Around the Middle/Late Jurassic boundary two trenches in front of advancing nappes formed in sequence in the central part of the Northern Calcareous Alps. The southern trench (Late Callovian to Early Oxfordian) accumulated a thick succession of gravitatively redeposited sediments derived from the sedimentary sequences of the accreted Triassic–Liassic Hallstatt Zone deposited on the outer shelf and the margin of the Late Triassic carbonate platform. During a previous stage these sediments derived from sequences deposited on the more distal shelf (Salzberg facies zone of Hallstatt unit, Meliaticum), and in a later stage from more proximal parts (Zlambach facies zone of Hallstatt unit, Late Triassic reef belt). Low temperature–high pressure metamorphism of some Hallstatt limestones before redeposition is explained by the closure of parts of the Tethys Ocean in Middle to Late Jurassic times and associated subduction. In the northern trench (Late Oxfordian to Kimmeridgian) several hundred meters of sediment accumulated including redeposited material from a nearby topographic rise. This rise is interpreted as an advancing nappe front as a result of the subduction process. The sedimentary sealing by Tithonian sediments, documented by uniform deep-water sedimentation (Oberalm Formation), gives an upper time constraint for the tectonic events. In contrast to current models, which propose an extensional regime for the central and eastern Northern Calcareous Alps in the Late Jurassic, we propose a geodynamic model with a compressional regime related to the Kimmerian orogeny.
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  • 80
    Publication Date: 2020-07-14
    Description: This study should clarify the importance of morphology and stability of the mandibular gnathobases for the diet of Antarctic copepod species. The gnathobase morphology of the dominant copepod species Calanoides acutus, Calanus propinquus, Ctenocalanus citer, Rhincalanus gigas, Metridia gerlachei, Stephos longipes, Microcalanus pygmaeus and Paraeuchaeta antarctica from the Southern Ocean was investigated in detail by means of a scanning electron microscope. The mandibular gnathobases of C. acutus, C. propinquus and C. citer have relatively short and compact teeth. These species feed mainly on diatoms and are able to crack the silicious diatom frustules with their mandibular gnathobases by directed pressure. In contrast the teeth of the mandibular gnathobases of P. antarctica are very long and pointed. The nutrition of this species consists predominantly of other smaller copepod species. The motile prey can be held by skewering, using the gnathobases, and then eventually minced. The mandibular gnathobases of P. antarctica have notably more small bristles than those of the other investigated copepod species. These bristles are probably associated with receptors and could serve to locate the prey. The morphology of the gnathobases of R. gigas and M. gerlachei is between that of P. antarctica on the one side and that of C. acutus, C. propinquus and C. citer on the other. Based on the morphology of its gnathobases the copepod species S. longipes, which has to date been found to feed primarily on phytoplankton, mainly ice algae, must also be considered a zooplankton feeder. The investigation showed that M. pygmaeus has gnathobases with surprisingly long and pointed teeth, indicating that this species very probably feeds both on phyto- and on zooplankton organisms. While the mandibular gnathobases of the males of C. propinquus, R. gigas, M. gerlachei and S. longipes have the same morphology as the females of the respective species, in the other four investigated copepod species the males have reduced (C. acutus, C. citer and M. pygmaeus) or completely missing mandibular gnathobases (P. antarctica). The teeth of the gnathobases of all studied species with the exception of M. gerlachei consist of a different material than the remaining parts of the gnathobases. This material seems to be silicate, which probably enhances the stability of the gnathobase teeth.
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  • 81
    Publication Date: 2015-01-29
    Description: Lipid content, fatty acid composition, and feeding activity of the dominant Antarctic copepods, Calanoides acutus, Calanus propinquus, and Metridia gerlachei, were studied at a quasi-permanent station in the eastern Weddell Sea in December 2003. During 3 weeks of the spring phytoplankton development, total lipid levels of females and copepodite stages V (CVs) of C. acutus were almost doubled. Meanwhile, only a slight increase in total lipid content occurred in M. gerlachei, and no clear trend was observed in lipids of C. propinquus females. The pronounced increase of lipids in C. acutus was due to an accumulation of wax esters. The proportion of wax esters in the lipids of M. gerlachei was clearly lower, while triacylglycerols played a more important role. In C. propinquus, triacylglycerols were the only neutral lipid class. There were no pronounced changes in the feeding activity of M. gerlachei, whereas the feeding activity of C. acutus had rapidly increased with the development of the phytoplankton bloom in December, which explains its rapid lipid accumulation. The combination of gut content and fatty acid trophic marker analyses showed that C. acutus was feeding predominantly on diatoms. The typical diatom fatty acid marker, 16:1(n-7), slightly decreased and the tracer for flagellates, 18:4(n-3), increased in females and CVs of C. acutus. This shift indicates the time, when the significance of flagellates started to increase. The three copepod species exhibited different patterns of lipid accumulation in relation to their trophic niches and different duration of their active phases. The investigations filled a crucial data gap in the seasonal lipid dynamics of dominant calanoid copepods in the Weddell Sea in December and support earlier hypotheses on their energetic adaptations and life cycle strategies.
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  • 82
    Publication Date: 2015-02-11
    Description: A regional classification of shoreline segments along the Alaskan Beaufort Sea Coast was developed as the basis for quantifying coastal morphology, lithology, and carbon and mineral sediment fluxes. We delineated 48 mainland segments totaling 1,957 km, as well as 1,334 km of spits and islands. Mainland coasts were grouped into five broad classes: exposed bluffs (313 km), bays and inlets (235 km), lagoons with barrier islands (546 km), tapped basins (171 km) and deltas (691 km). Sediments are mostly silts and sands, with occasional gravel, and bank heights generally are low (2–4 m), especially for deltas (〈1 m). Mean annual erosion rates (MAER) by coastline type vary from 0.7 m/year (maximum 10.4 m/year) for lagoons to 2.4 m/year for exposed bluffs (maximum 16.7 m/year). MAERs are much higher in silty soils (3.2 m/year) than in sandy (1.2 m/year) to gravelly (−0.3 m/year) soils. Soil organic carbon along eroding shorelines (deltas excluded) range from 12 to 153 kg/m2 of bank surface down to the water line. We assume carbon flux out from depositional delta sediments is negligible. Across the entire Alaskan Beaufort Sea Coast, estimated annual carbon input from eroding shorelines ranges from –47 to 818 Mg/km/year (Metric tones/km/year) across the 48 segments, average 149 Mg/km/year (for 34 nondeltaic segments), and total 1.8×105 Mg/year. Annual mineral input from eroding shorelines ranges from −1,863 (accreting) to 15,752 Mg/km/year, average 2,743 Mg/km/year, and totals 3.3 ×106 Mg/year.
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  • 83
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    In:  Geo-Marine Letters, 25 (2-3). pp. 110-120.
    Publication Date: 2015-03-05
    Description: The results of permafrost and coastal dynamics investigations at four key sites on the shores of the Kara and Barents Seas are discussed. Three ACD key sites, Marre-Sale, Shpindler, and Kolguev, characterize areas with active thermal erosion; key site Cape Bolvansky is found on a relatively stable coast. It is found that the coastal retreat rate has spatial and temporal variability, which is typical of the entire Arctic coast. Coastal deposits on the Kara and Barents Seas have a low organic carbon content. Annual input of material into the Kara Sea resulting from coastal degradation reaches 35–40 million t, including about 7.5 million t of ice, 0.35 million t of organic carbon, and 0.3 million t of soluble salts.
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  • 84
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    In:  Doklady Earth Sciences, 423 (1). pp. 1290-1293.
    Publication Date: 2015-03-06
    Description: According to available historical evidence, colonization of the White Sea region began in the 9th–8th centuries B.C. [2]. This unique region with ancient residence sites experiences progressively increasing anthropogenic load against the background of natural climatic changes. The intense economic development of the region requires complex ecological and paleogeographic studies aimed at detailed reconstruction of past sedimentation settings. The analysis of dinocysts, which makes it possible to reconstruct various parameters of water masses washing the Arctic shelf, has become a promising method in paleohydrological studies, widely used in recent years [10, 11]. Dinoflagellates, which represent one of the main phytoplankton groups in the Arctic Seas, the White Sea included, form cysts with biopolymer envelopes, which are preserved in sediments. Thus, information on glacial–hydrological conditions is recorded in marine sediments. In the White Sea, this method was first used for the study of bottom sediments only in 2003 [3, 15]. In this communication, we present the first results obtained during the thorough study of dinocysts in bottom sediment cores from the White Sea, which cover the last 250 years. The study of this microfossil group made it possible to reconstruct in detail changes in glacial–hydrological settings in the sea and reveal their relations with known climatic–hydrological events that occurred in neighboring regions during the historical period.
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  • 85
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    In:  Paleontological Journal, 40 (Suppl. 2). S91-S204.
    Publication Date: 2015-03-26
    Description: This work is the first detailed description of the Late Pleistocene-Holocene and Recent Ostracoda of the Laptev Sea. A total of 45 species in 22 genera and 13 families have been identified. All these species are described monographically. Three different ecological assemblages of ostracodes corresponding to different combinations of environmental parameters have been established; they are restricted to three regions of the sea: western-central, eastern, and southern. The recent ostracode assemblages of the Laptev Sea have been compared with those from other Arctic areas and are most similar to those of the Beaufort and Kara seas. Data on recent Ostracoda are used for paleoenvironmental reconstructions on the eastern shelf and western continental slope of the Laptev Sea. For this purpose, ostracodes from five sections obtained from these parts of the sea have been examined. The oldest sediments, which are of Late Pleistocene age (15.8 cal. ka BP), have been recovered in a core from the western continental slope. These yielded five ostracode assemblages, which correspond to different paleoenvironments and replaced each other in the course of the rapid postglacial sea-level rise, thus showing variations in the Atlantic water inflow from the west and freshwater discharge from the subaerially exposed shelf. On the outer shelf of the eastern part of the sea, the rapid sea-level rise in the Early Holocene (lowermost dating 11.3 cal. ka BP) led to a rapid transition from assemblages of brackish-water near-shore environments to those of modernlike normal marine environments; modern environments were established about 8.2 cal. ka ago. Since the core sections from the inner shelf correspond to the time when the level of the sea had already reached its modern values, the changes in the taxonomic composition of ostracode assemblages primarily mirror variations in river runoff.
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  • 86
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    In:  Journal of Paleolimnology, 34 (3). pp. 363-376.
    Publication Date: 2015-04-02
    Description: Ostracode analysis was carried out on samples from ice-rich permafrost deposits obtained on the Bykovsky Peninsula (Laptev Sea). A composite profile was investigated that covers most of a 38-m thick permafrost sequence and corresponds to the last ca. 60 kyr of the Late Quaternary. The ostracode assemblages are similar to those known from European Quaternary lake deposits during cold stages. The ostracode habitats were small, shallow, cold, oligotrophic pools located in low centred ice wedge polygons or in small thermokarst depressions. In total, 15 taxa, representing 7 genera, were identified from 65 samples. The studied section is subdivided into six ostracode zones that correspond to Late Quaternary climatic and environmental stadial-interstadial variations established by other paleoenvironmental proxies: (1) cold and dry Zyrianian stadial (58–53 kyr BP); (2) warm and dry Karginian interstadial (48–34 kyr BP); (3) transition from the Karginian interstadial to the cold and dry Sartanian stadial (34–21 kyr BP); (4) transition from the Sartanian stadial to the warm and dry Late Pleistocene period, the Allerød (21–14 kyr BP); (5) transition from the Allerød to the warm and wet Middle Holocene (14–7 kyr BP); and (6) cool and wet Late Holocene (ca. 3 kyr BP). The abundance and diversity of the ostracodes will be used as an additional bioindicator for paleoenvironmental reconstructions of the Siberian Arctic.
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  • 87
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    In:  In: Land-Ocean Systems in the Siberian Arctic : Dynamics and History. , ed. by Kassens, H., Bauch, H. A., Dmitrenko, I. A. and Eicken, H. Springer, Berlin (u.a.), pp. 587-599. ISBN 3-540-65676-6
    Publication Date: 2015-04-08
    Type: Book chapter , NonPeerReviewed
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  • 88
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    In:  In: Land-Ocean Systems in the Siberian Arctic : Dynamics and History. , ed. by Kassens, H., Bauch, H. A., Dmitrenko, I. A. and Eicken, H. Springer, Berlin (u.a.), pp. 667-682. ISBN 3-540-65676-6
    Publication Date: 2015-04-08
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  • 89
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    In:  Doklady Earth Sciences, 423 (2). pp. 1343-1347.
    Publication Date: 2018-12-31
    Description: The Kola Peninsula is one of the key areas for the study of postglacial development of northern Europe. The repeated formation of ice shields during the Pleistocene determined the peculiar features of the relief, structure of Quaternary sediments, and recent landscapes of the peninsula. The paleogeographic reconstructions available for the last 10–11 ka are based on results of the palynological analysis of lacustrine and boggy sediments [3–5, 9–11] and, to a lesser extent, on diatoms from the lacustrine sediments [7, 8]. In this communication, we present the first data on diatom assemblages from peat sections of the central Kola Peninsula and their detailed radiocarbon ages. The high sensitivity of lacustrine–boggy ecosystems to environmental changes made it possible to define several Holocene diatom assemblages and to correlate their succession with regional climatic events and variations in the local base level.
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  • 90
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    In:  Geologische Rundschau, 87 (2). pp. 518-521.
    Publication Date: 2018-01-25
    Description: Rubrik "Neues aus dem Geologenarchiv (1997)"
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  • 91
    Publication Date: 2015-08-27
    Description: We have employed electronmicroscopical methods (SEM, TEM) to document the microbial community associated with the marine sponge Aplysina cavernicola (formerly Verongia cavernicola, class Demospongiae). Five dominant bacterial types were identified, three of which resemble the morphotypes originally described by Vacelet (1975). One bacterial type possesses morphological properties that are characteristic of the genus Planctomyces. In addition, morphologically uniform bacteria which reside inside the nuclei of host cells were observed. Using in situ hybridization with fluorescently labelled rRNA probes directed against known bacterial groups, the phylogenetic affiliation of the mesohyl bacteria was assessed. It could be shown that the vast majority of mesohyl bacteria belongs to the domain Bacteria with a low GC content. Among the Bacteria, the delta-Proteobacteria were most abundant, followed by the gamma-Proteobacteria and representatives of the Bacteroides cluster. Clusters of Gram-positive bacteria with a high GC content were also found consistently in low amounts. No hybridization signal was obtained with probes specific to the domain Archaea, to the alpha- and beta-Proteobacteria and to the Cytophaga/Flavobacterium cluster. This study describes for the first time the application of the “top-to-bottom approach” using 16S rRNA probes and in situ hybridization to assess the microbial diversity in Aplysina sponges
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  • 92
    Publication Date: 2015-09-21
    Description: Comparison of five deep-water coral (DWC)/mound ecosystems along the European Continental Margin shows that suspended particulate organic matter (sPOM), a potential food source, is lipid rich and of high quality. However, there are differences between the sites. The Darwin and Pelagia Mounds (N. Rockall Trough and N. Porcupine Bank, respectively) have higher proportions of labile particulate lipids (including high proportions of polyunsaturated fatty acids) in the benthic boundary layer than Logachev, Hovland and Belgica Mounds (Rockall Bank, S. Porcupine Bank and Porcupine Seabight, respectively). The high quality sPOM could be transported downslope from the euphotic zone. There is some evidence for inter-annual variability at some sites (e.g. Hovland and Logachev Mounds) as large differences in suspended lipid and particulate organic carbon concentrations were observed over the sampling period. Elevated total organic carbon contents of sediments at mound sites, relative to control sites in some cases (particularly Darwin Mounds), probably reflect local hydrodynamic control and the trapping of sPOM by the DWC. Fresh POM can be relatively rapidly transferred to significant depth (up to 8 cm) through bioturbation that is evident at all sites. There is no clear evidence of present day hydrocarbon seepage at any of the sites.
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  • 93
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    In:  In: Cold-Water Corals and Ecosystems. , ed. by Freiwald, A. and Roberts, J. M. Springer, Berlin, pp. 915-936. ISBN 978-3-540-24136-2
    Publication Date: 2015-09-30
    Description: This study focuses on bioerosion of an aphotic deep-water coral mound, the Propeller Mound, in the northern Porcupine Seabight. The predominant framework builder is the cosmopolitan cold-water coral Lophelia pertusa. We demonstrate bioerosion patterns within the skeleton of L. pertusa using a new embedding method under vacuum conditions with subsequent scanning electron microscope analysis. Following this method, 23 ichnospecies are documented and related to heterotrophic organism groups such as Bacteria (1), Fungi (12), Bryozoa (1), Foraminifera (3), and Porifera (6). Predominant endolithic sponges in the framework of L. pertusa are Alectona millari and Spiroxya heteroclita. Owing to its characteristic growth and surface ornamentation, trace casts of Spiroxya heteroclita are correlated to the well-known trace fossil Entobia laquea. Investigations of thin sections of post-mortem skeletons show a clearly pronounced endolithic tiering of three penetration depths. The analysed samples are divided into three macroscopic preservational stages differing in post-mortem age, and exposure of the framework. Bioerosion affects bare parts of the coral skeleton. Bioeroders preferably settle on one side of an upright growing colony. A succession usually starts with the infestation by bacteria and fungi. Contact zones of epiliths are preferred areas for penetration by endoliths. Sponges and foraminifers appear 10 cm below the zone of living polyps, followed by boring bryozoans 15 cm below. However, in one case the sponge Spiroxya heteroclita is documented in the skeleton of living polyps. Frameworks exposed to water host 19 ichnospecies, thus forming the most diverse ichnocoenosis, whereas nine ichnospecies are documented in coral specimens buried by sediment. Mapping of epi- and endoliths in living and freshly necrotic colonies represents a useful tool for monitoring environmental conditions and define ecological “health” of deep-water corals in a rapid large-scale assessment of the state of coral reefs.
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  • 94
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    In:  In: Cold-Water Corals and Ecosystems. , ed. by Freiwald, A. and Roberts, J. M. Springer, Berlin, pp. 157-172.
    Publication Date: 2015-09-30
    Description: Deep-water corals are widespread in the North Atlantic. Colonial azooxanthellate scleractinians sustain ecosystems mostly in the bathyal zone down the slopes and oceanic banks off the Iberian Peninsula to as far north as the Scandinavian shelf off northern Norway. Estimates of the geological age of 37 deepwater corals exposed at the seabed from major reef areas in the North Atlantic were based on U/Th datings. In contrast to the purely Holocene ages of deep-water corals in Scandinavian waters, the Faroe area and the Rockall Trough, deep-water corals from lower latitudes like the seamounts off NW-Africa, the Mid-Atlantic Ridge and the western Mediterranean Sea seemed to have grown continuously over the last 50 ka. Overall, deep-water corals showed U/Th ages between 0.09 and 53.5 ka.
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  • 95
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    In:  In: Cold-Water Corals and Ecosystems. , ed. by Freiwald, A. and Roberts, J. M. Springer, Berlin, pp. 731-744. ISBN 978-3-540-24136-2
    Publication Date: 2017-02-02
    Description: Colonial non-zooxanthellate corals from deep-water coral reefs, Lophelia pertusa and Madrepora oculata, produce large amounts of extracellular mucus (EMS). This mucus has various functions, e.g., an antifouling capability protecting the coral skeleton from attacks of endolithic and boring organisms. Both corals show thick epithecal and exothecal skeletal parts with a clear lamellar growth pattern. The formation of the epitheca is unclear. It is supposed that the EMS play a central role during the calcification process of the epithecal skeletal parts. Staining with the fluorochrome tetracycline has shown an enrichment of Ca2+ ions in the mucus. In order to investigate this hypothesis, the protein content of the mucus and the intracrystalline organic matter from newly formed epithecal aragonite of Madrepora oculata was determined via sodium dodecyl sulfate (SDS) gel electrophoresis. Identical band patterns within both substances could be detected, one around 45 kDa molecular weight and a cluster around 30-35 kDa molecular weight. The occurrence of identical protein patterns within the mucus and in the newly formed aragonite confirms the idea that the mucus plays an important role during the organomineralization of the coral epitheca.
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  • 96
    Publication Date: 2017-02-07
    Description: In spite of the fundamental role the Atlantic Meridional Overturning Circulation (AMOC) plays for global climate stability, no direct current measurement of the Denmark Strait Overflow, which is the densest part of the AMOC, has been available until recently that resolve the cross-stream structure at the sill for long periods. Since 1999, an array of bottom-mounted acoustic instruments measuring current velocity and bottom-to-surface acoustic travel times was deployed at the sill. Here, the optimization of the array configuration based on a numerical overflow model is discussed. The simulation proves that more than 80% of the dense water transport variability is captured by two to three acoustic current profilers (ADCPs). The results are compared with time series from ADCPs and Inverted Echo Sounders deployed from 1999 to 2003, confirming that the dense overflow plume can be reliably measured by bottom-mounted instruments and that the overflow is largely geostrophically balanced at the sill.
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  • 97
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    In:  Australian Journal of Earth Sciences, 52 . pp. 603-605.
    Publication Date: 2015-11-24
    Description: Meteorite impacts cause conversion of kinetic energy into thermal energy. Part of this thermal energy is used to form a melt sheet, part is dissipated to heat the target rocks and these together with the hot rocks that elastically rebound from the depth of several kilometres (central uplift) activate hydrothermal circulation. Impact-generated hydrothermal systems have been documented from several impact structures world-wide. Three Australian examples—Shoemaker, Woodleigh and Yarrabubba—provide evidence of hydrothermal fluid flow both within and around the structures. Field observations, and petrographic and geochemical data suggest a common evolutionary trend of post-impact hydrothermal activity from early high-temperature alkali metasomatism to a later lower temperature H + metasomatism, resulting in the overprinting by hydrous mineral assemblages. Hydrothermal systems activated by meteorite-impact events are important because they may also form economic mineral deposits, as is documented for several impact structures in the world. A working model of hydrothermal circulation in terrestrial impact structures posits two main stages: (i) initial high-temperature fluids percolate downward causing widespread alkali metasomatism of the shattered target rocks below the melt sheet, resulting in their modification to rocks of syenitic affinity; and (ii) inflow of meteoric water and progressive cooling of the melt sheet leads to a lower temperature stage, in which hydrothermal fluid flow tends to move upward, resulting in mineral assemblages and alteration patterns that resemble those of epithermal systems. In addition, these fluids can discharge at the surface as hot springs.
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  • 98
    Publication Date: 2018-03-21
    Description: The pelagic nekton community was sampled with the RMT 25 opening/closing net and a neuston net at two stations in the Scotia Sea south of the Antarctic Polar Front in the open ocean (Station 1) and on the South Georgia northwestern slope (Station 2). Downward oblique tows were made with the RMT 25 through discrete 200 m layers to 1000 m in daylight and darkness. A total of 119 cephalopods representing nine species were removed from the samples, and mantle and arm lengths were measured to the nearest 0.1 mm. The most abundant species at each station was an undescribed Brachioteuthis sp. (B. ?picta). Galiteuthis glacialis and Alluroteuthis antarcticus were caught at both stations. Histioteuthis eltaninae, Bathyteuthis abyssicola and Psychroteuthis glacialis were caught at Station 1. Mastigoteuthis psychrophila and a Chiroteuthis sp. were caught at Station 2. B. ?picta was present throughout the water column to 1000 m at both stations, with little evidence of ontogenetic descent. There was evidence for ontogenetic descent in G. glacialis. This species was absent from the Antarctic Surface Water (ASW) at Station 1, where it was concentrated in the Circumpolar Deep Water (CDW). At Station 2 it was present throughout the water column to 1000 m. The other species were all caught in the core of the CDW (〉400 m). In juvenile B. ?picta, G. glacialis and A. antarcticus, growth of the brachial crown is positively allometric with respect to mantle length. Recent data on biomass spectra in high-latitude pelagic systems show that they are characterised by the presence of peaks of biomass separated by biomass minima. Positive allometric growth in the brachial crown of these antarctic oceanic squid is suggested to have evolved as an adaptation to the peaked, or domed, structure of the pelagic biomass spectrum which must be spanned by these predators as their optimum prey size increases with growth. Interspecific differences in the allometry of tentacle growth are probably related to differences in strategies for stalking and capture of prey.
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  • 99
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    Springer
    In:  In: The Prokaryotes : a handbook on the biology of bacteria. , ed. by Dworkin, M., Falkow, S., Rosenberg, E., Schleifer, K. H. and Stackebrandt, E. Springer, New York, USA, pp. 41-64. 3. ed. ISBN 0-387-25495-1
    Publication Date: 2015-03-02
    Type: Book chapter , PeerReviewed
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  • 100
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    Springer
    In:  Geo-Marine Letters, 25 (2-3). pp. 190-195.
    Publication Date: 2015-03-06
    Description: The geoecological situation in the regions of intense industrial exploitation on the Pechora Sea coast, particularly in the Varandei area, is dangerous. Human factors intensify eolian and slope processes and thermoerosion. Coastal stability decreases and coastal retreat rates are twice as high as in regions unaffected by human activity. Industrial exploitation results in the destruction of natural environments and considerable material losses. Several housing estates and industrial constructions have already been destroyed because of coastal erosion. Damage increases each year as the cliff retreats towards the center of the Varandei settlement. The oil terminal, airport and other industrial objects are also endangered.
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