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  • American Geophysical Union  (60,229)
  • Hindawi  (58,593)
  • Irkutsk : Ross. Akad. Nauk, Sibirskoe Otd., Inst. Zemnoj Kory
  • Krefeld : Geologischer Dienst Nordhein-Westfalen
  • Public Library of Science (PLoS)
  • 2010-2014  (111,681)
  • 2005-2009  (33,829)
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  • 1
    Publication Date: 2020-12-18
    Description: Along the Italian peninsula adjoin two crustal domains, peri-Tyrrhenian and Adriatic, whose boundary is not univocal in central Italy. In this area, we attempt to map the extent of the Moho in the two terrains from variations of the travel time difference between the direct P wave and the P-to-S wave converted at the crust-mantle boundary, called PsMoho. We use teleseismic receiver functions computed at 38 broad-band stations in this and previous studies, and assigned each of the recording sites to the Adriatic or peri-Tyrrhenian terrains based on station location, geologic and geophysical data and interpretation, and consistency of delays with the regional Moho trend. The results of the present study show that the PsMoho arrival time varies from 2.3 to 4.1 s in the peri-Tyrrhenian domain and from 3.7 to 5.5 s in the Adriatic domain. As expected, the lowest time difference is observed along the Tyrrhenian coastline and the largest values are observed in the axial zone of the Apennine chain. A key new result of this study is a sharp E-W boundary in the Adriatic domain that separates a deeper Moho north of about 42 N latitude from a shallower Moho to the south. This feature is constrained for a length of about 40 km by the observations available in this study. The E-W boundary requires a revision of prior mapping of the Moho in central Italy and supports previous hypotheses of lithosphere segmentation.
    Description: Published
    Description: 3929–3938
    Description: 3.3. Geodinamica e struttura dell'interno della Terra
    Description: JCR Journal
    Description: open
    Keywords: teleseismic receiver functions ; Moho discontinuity ; central Italy ; 04. Solid Earth::04.07. Tectonophysics::04.07.02. Geodynamics
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 2
    Publication Date: 2021-02-17
    Description: Pelagic marine carbonates provide important records of past environmental change. We carried out detailed low-temperature magnetic measurements on biogenic magnetite-bearing sediments from the Southern Ocean (Ocean Drilling Program (ODP) Holes 738B, 738C, 689D, and 690C) and on samples containing whole magnetotactic bacteria cells. We document a range of low-temperature magnetic properties, including reversible humped low-temperature cycling (LTC) curves. Different degrees of magnetite oxidation are considered to be responsible for the observed variable shapes of LTC curves. A dipole spring mechanism in magnetosome chains is introduced to explain reversible LTC curves. This dipole spring mechanism is proposed to result from the uniaxial anisotropy that originates from the chain arrangement of biogenic magnetite, similar to published results for uniaxial stable single domain (SD) particles. The dipole spring mechanism reversibly restores the remanence during warming in LTC measurements. This supports a previous idea that remanence of magnetosome chains is completely reversible during LTC experiments. We suggest that this magnetic fingerprint is a diagnostic indicator for intact magnetosome chains, although the presence of isolated uniaxial stable SD particles and magnetically interacting particles can complicate this test. Magnetic measurements through the Eocene section of ODP Hole 738B reveal an interval with distinct magnetic properties that we interpret to originate from less oxidized biogenic magnetite and enrichment of a biogenic “hard” component. Co-occurrence of these two magnetic fingerprints during the late Eocene in the Southern Ocean indicates less oxic conditions, probably due to increased oceanic primary productivity and organic carbon burial.
    Description: Published
    Description: 6049–6065
    Description: 2.2. Laboratorio di paleomagnetismo
    Description: JCR Journal
    Description: restricted
    Keywords: pelagic carbonates ; biogenic magnetite ; rock magnetism ; environmental magnetism ; ODP ; 04. Solid Earth::04.04. Geology::04.04.08. Sediments: dating, processes, transport ; 04. Solid Earth::04.05. Geomagnetism::04.05.09. Environmental magnetism
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 3
    Publication Date: 2021-03-24
    Description: On 24 August 2013 a sudden gas eruption from the ground occurred in the Tiber river delta, nearby Rome's international airport of Fiumicino. We assessed that this gas, analogous to other minor vents in the area, is dominantly composed of deep, partially mantle-derived CO2, as in the geothermal gas of the surrounding Roman Comagmatic Province. Increased amounts of thermogenic CH4 are likely sourced from Meso-Cenozoic petroleum systems, overlying the deep magmatic fluids. We hypothesize that the intersection of NE-SW and N-S fault systems, which at regional scale controls the location of the Roman volcanic edifices, favors gas uprising through the impermeable Pliocene and deltaic Holocene covers. Pressurized gas may temporarily be stored below these covers or within shallower sandy, permeable layers. The eruption, regardless the triggering cause—natural or man-made, reveals the potential hazard of gas-charged sediments in the delta, even at distances far from the volcanic edifices.
    Description: Published
    Description: 5632–5636
    Description: 2.2. Laboratorio di paleomagnetismo
    Description: JCR Journal
    Description: restricted
    Keywords: geothermal gas ; deep CO2 ; Tiber river delta ; thermogenic CH4 ; 04. Solid Earth::04.04. Geology::04.04.09. Structural geology ; 04. Solid Earth::04.04. Geology::04.04.12. Fluid Geochemistry
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 4
    Publication Date: 2017-04-04
    Description: The southern New England Orogen (NEO) in eastern Australia is characterized by tight curvatures (oroclines), but the exact geometry of the oroclines and their kinematic evolution are controversial. Here we present new data on the anisotropy ofmagnetic susceptibility (AMS), which provide a petrofabric proxy for the finite strain associated with the oroclines. We focus on a series of preoroclinal Devonian-Carboniferous fore-arc basin rocks, which are aligned parallel to the oroclinal structure, and by examining structural domains, we test whether or not the magnetic fabric is consistent with the strain axes. AMS data show a first-order consistency with the shape of the oroclines, characterized, in most of structural domains, by subparallelism between magnetic lineations, “structural axis” and bedding. With the exception of the Gresford and west Hastings domains, our results are relatively consistent with the existence of the Manning and Nambucca (Hastings) Oroclines. Reconstruction of magnetic lineations to a prerotation (i.e., pre–late Carboniferous) stage, considering available paleomagnetic results, yields a consistent and rather rectilinear NE-SW predeformation fore-arc basin. This supports the validity of AMS as a strain proxy in complex orogens, such as the NEO. In the Hastings Block, magnetic lineations are suborthogonal to bedding, possibly indicating a different deformational history with respect to the rest of the NEO.
    Description: Published
    Description: 2261–2282
    Description: 1A. Geomagnetismo e Paleomagnetismo
    Description: JCR Journal
    Description: restricted
    Keywords: AMS data, magnetic fabric, oroclines ; 04. Solid Earth::04.05. Geomagnetism::04.05.06. Paleomagnetism ; 04. Solid Earth::04.07. Tectonophysics::04.07.01. Continents ; 04. Solid Earth::04.07. Tectonophysics::04.07.05. Stress ; 04. Solid Earth::04.07. Tectonophysics::04.07.07. Tectonics
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 5
    Publication Date: 2017-04-04
    Description: We report the paleomagnetic and magnetic fabric results of 58 sites from Cretaceous-Miocene marine and continental strata from the Eastern Cordillera (EC) and the Cucuta zone, at the junction between the Santander Massif and the Merida Andes of Colombia. The EC is an intracontinental doubly vergent range inverting a Triassic to Early Cretaceous rift zone. Twenty-three sites reveal nonsystematic tectonic rotations, including unrotated areas of the EC range with respect to stable South America. Our data show that the EC inverted a NNE oriented rift zone and that the orientation of the Mesozoic rift and the mountain chain roughly correspond. Interestingly, magnetic lineations from anisotropy of magnetic susceptibility analysis do not trend parallel to the chain but rather are oblique to the main orogenic trend. By also considering GPS evidence of a ~1 cm/yr ENE displacement of central western Colombia accommodated by the EC, we suggest that the Miocene-Recent deformation event of this belt arises from ENE oblique convergence reactivating a NNE oriented rift zone. Oblique shortening was likely partitioned into pure dip-slip shear characterizing thick-skinned frontal thrust sheets (well known along both chain fronts) and by range-parallel right-lateral strike-slip faults, which have not been identified yet, but likely exist in the axial part of the EC. Finally, the 35° ± 9° clockwise rotation observed in four post-Miocene magnetically overprinted sites from the Cucuta zone reflects late Cenozoic and ongoing right-lateral strike-slip displacement occurring along faults parallel to the Boconó fault system, possibly connected with the right-lateral faults inferred to exist along the axial part of the EC.
    Description: Published
    Description: 2233–2260
    Description: 1A. Geomagnetismo e Paleomagnetismo
    Description: JCR Journal
    Description: restricted
    Keywords: Paleomagnetism, magnetic fabric, Eastern Cordillera ; 04. Solid Earth::04.05. Geomagnetism::04.05.06. Paleomagnetism ; 04. Solid Earth::04.07. Tectonophysics::04.07.02. Geodynamics ; 04. Solid Earth::04.07. Tectonophysics::04.07.04. Plate boundaries, motion, and tectonics ; 04. Solid Earth::04.07. Tectonophysics::04.07.06. Subduction related processes ; 04. Solid Earth::04.07. Tectonophysics::04.07.07. Tectonics
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 6
    Publication Date: 2017-04-04
    Description: Unstable oscillations confined within the mixed layer close to the equator are generated in wind-forced experiments performed in a multilevel general circulation model configured for the tropical Pacific Ocean. The experiments indicate that the waves develop preferentially in the eastern Pacific along the northern temperature front. However, there is clear evidence of a second unstable region along the southern temperature front in the central Pacific. In both regions the instabilities propagate westward, but in the central Pacific their phase speed is considerably smaller. The differences between the wave characteristics in the eastern and central Pacific are closely correlated to the differences in the time mean conditions of the flow. The eastern instabilities have a structure with two peaks in amplitude: one located on the equator and the other a few degrees north of it. Their dispersion characteristics show many similarities to those of tropical instability waves (TIWs) observed in the Pacific Ocean, while the instabilities which grow in the central Pacific do not have any known observed correspondents. We explore the spatial variability of the simulated waves through a wavelet analysis, which provides detailed results on how the period and wavelength of the instabilities change as a function of longitude, latitude, and depth. The wavelet analysis reveals that in the eastern Pacific and close to the surface the TIWs have a phase speed of-48 cm/s, while in the central Pacific they have a phase speed of-11 cm/s. In particular, the change in the phase speed is due to a change in the dominant period of the TIWs: The period of the central Pacific instabilities is considerably longer than the period of the instabilities present in the eastern Pacific.
    Description: This work was supported by the Department of Commerce/NOAA grant NA56GP0026. One of the authors (SM) was partially supported by a NASA Global Change Fellowship NGT-30288.
    Description: Published
    Description: 29613-29635
    Description: 4A. Clima e Oceani
    Description: JCR Journal
    Description: restricted
    Keywords: Ocean modeling ; Equatorial Ocean ; Tropical Instability Waves ; 03. Hydrosphere::03.01. General::03.01.01. Analytical and numerical modeling
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 7
    Publication Date: 2017-04-04
    Description: One of the main challenges of paleomagnetic research is to obtain high-resolution geomagnetic field intensity reconstructions. For the last millennia, these reconstructions are mostly based on archeomagnetic data. However, the quality of the intensity data available in the databases is very variable, and the high scatter observed in the records clearly suggests that some of them might not be reliable. In this work we investigate how the geomagnetic field intensity reconstructions and, hence, our present knowledge of the geomagnetic field in the past, are affected by the quality of the data selected for modeling the Earth’s magnetic field. For this purpose we rank the European archeointensity data in four quality categories following widely accepted paleomagnetic criteria based on the methodology used during the laboratory treatment of the samples and on the number of specimens retained to calculate the mean intensities. Four geomagnetic field regional models have been implemented by applying the revised spherical cap harmonic analysis to these four groups of input data. Geomagnetic field models strongly depend on the used data set. The model built using all the available data (without any preselection) appears to be the less accurate, indicating some internal inconsistencies of the data set. In addition, some features of this model are clearly dominated by the less reliable archeointensity data, suggesting that such features might not reflect real variations of the past geomagnetic field. On the contrary, the regional model built on selected high-quality intensity data shows a very consistent intensity pattern at the European scale, confirming that the main intensity changes observed in Europe in the recent history of the geomagnetic field occurred at the continental scale.
    Description: Published
    Description: 2515–2530
    Description: 1A. Geomagnetismo e Paleomagnetismo
    Description: JCR Journal
    Description: open
    Keywords: Geomagnetism ; Paleomagnetism ; Archeomagnetism ; 04. Solid Earth::04.05. Geomagnetism::04.05.02. Geomagnetic field variations and reversals ; 04. Solid Earth::04.05. Geomagnetism::04.05.05. Main geomagnetic field ; 04. Solid Earth::04.05. Geomagnetism::04.05.06. Paleomagnetism
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 8
    Publication Date: 2017-04-04
    Description: High-resolution tomography from the 2009 L’Aquila extensional seismic sequence has shown that the Mw 6.1 main shock and most of the aftershocks occurred within a high velocity body (6.6≤Vp≤6.8 Km/s), located between depths of 3 and 12 km. The nature of the high Vp-body has remained speculative, although exhumed mafic deep crustal and upper mantle rocks (serpentinites) have been favoured. We used 3D magnetic anomaly modelling to investigate the plausibility of these favoured sources for the L’Aquila body. The modelling does not support the presence of high-velocity serpentinites with a 30-50% serpentinization degree and gabbros. Accordingly, we conclude that the high Vp-body may represent non-magnetic upper Triassic and possibly lower Liassic dolomites that have been drilled in neighbouring wells for 2-4 km. This conclusion is also consistent with the lack of a coherent gravity anomaly for the body. We speculate that ultra-thick Triassic dolomites reaching a thickness of 8 km may have been deposited in syntectonic wedges formed at the northern margin of the Ionian Sea, where oceanic spreading occurred in mid-late Triassic times.
    Description: Published
    Description: 6756–6770
    Description: 7A. Geofisica di esplorazione
    Description: JCR Journal
    Description: restricted
    Keywords: L’Aquila earthquake ; seismic tomography ; magnetic anomalies ; magnetic modelling ; dolomites; ; Apennines ; 04. Solid Earth::04.05. Geomagnetism::04.05.04. Magnetic anomalies
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 9
    Publication Date: 2020-02-24
    Description: We present unprecedented data of real-time measurements of the concentration and isotope composition of CO2 in air and in fumarole-plume gases collected in 2013 during two campaigns at Mount Etna volcano, which were made using a laser-based isotope ratio infrared spectrometer. We performed approximately 360 measurements/h, which allowed calculation of the δ13C values of volcanic CO2. The fumarole gases of Torre del Filosofo (2900mabove sea level) range from 3.24 ± 0.06‰to 3.71 ± 0.09‰, comparable to isotope ratio mass spectrometry (IRMS) measurements of discrete samples collected on the same dates. Plume gases sampled more than 1 km from the craters show a δ13C= 2.2 ± 0.4‰, in agreement with the crater fumarole gases analyzed by IRMS. Measurements performed along ~17km driving track from Catania to Mount Etna show more negative δ13C values when passing through populated centers due to anthropogenic-derived CO2 inputs (e.g., car exhaust). The reported results demonstrate that this technique may represent an important advancement for volcanic and environmental monitoring.
    Description: Published
    Description: 2382–2389
    Description: 2V. Dinamiche di unrest e scenari pre-eruttivi
    Description: JCR Journal
    Description: restricted
    Keywords: Real-time data of CO2 content and δ13C in atmospheric/volcanic gases ; This study opens new perspective for the community for volcanic surveillance ; 04. Solid Earth::04.04. Geology::04.04.12. Fluid Geochemistry ; 04. Solid Earth::04.08. Volcanology::04.08.01. Gases ; 04. Solid Earth::04.08. Volcanology::04.08.06. Volcano monitoring ; 04. Solid Earth::04.08. Volcanology::04.08.07. Instruments and techniques ; 05. General::05.02. Data dissemination::05.02.01. Geochemical data
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  • 10
    Publication Date: 2017-04-04
    Description: Strong changes in seismic radiation, comparable to those preceding and/or accompanying eruptive activity in recent years, were recorded at Mt. Etna volcano, Italy, from November 2005 to January 2006. The amplitude of volcanic tremor peaked in mid-December 2005 after a continuous, slow increase from August 2005 onwards, during which neither effusive nor paroxysmal activity was observed by volcanologists and alpine guides. During this time span, the centroid locations of volcanic tremor moved towards the surface, more and more clustered below the summit craters. The application of pattern classification analysis based on Self-Organizing Maps and fuzzy clustering to volcanic tremor data highlighted variations in the frequency domain as well. These changes were temporally associated with ground deformation variations, as indicative of a mild inflation of the summit of the volcano, and with a conspicuous increase in the SO2 plume-flux emission. Overall, we interpret this evidence as the result of recharging of the volcanic feeder at depth (〉 3 km below sea level) during which magma did not reach the shallow plumbing system.
    Description: Published
    Description: 4989–5005
    Description: 2V. Dinamiche di unrest e scenari pre-eruttivi
    Description: JCR Journal
    Description: embargoed_20140606
    Keywords: time series analysis ; volcano seismology ; volcano monitoring ; neural network and fuzzy logic ; seismic tomography ; 04. Solid Earth::04.06. Seismology::04.06.08. Volcano seismology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 11
    Publication Date: 2017-04-04
    Description: The statistical analysis of volcanic activity at Mt Etna was conducted with the twofold aim of (1) constructing a probability map for vent opening of future flank eruptions and (2) forecasting the expected number of eruptive events at the summit craters. The spatiotemporal map of new vent opening at Etna volcano is based on the analysis of spatial locations and frequency of flank eruptions starting from 1610. Thanks to the completeness and accuracy of historical data over the last four centuries, we examined in detail the spatial and temporal distribution of flank eruptions showing that effusive events follow a nonhomogenous Poisson process with space-time varying intensities. After demonstrating the spatial nonhomogeneity and the temporal nonstationarity of flank eruptions at Etna, we calculated the recurrence rates (events expected per unit area per unit time) and produced different spatiotemporal probability maps of new vent opening in the next 1, 10 and 50 years. These probabilistic maps have an immediate use in evaluating the future timing and areas of Etna prone to volcanic hazards. Finally, the results of the analysis of the persistent summit activity during the last 110 years indicate that the hazard rate for eruptive events is not constant with time, differs for each summit crater of Mt Etna, highlighting a general increase in the eruptive frequency starting from the middle of last century and particularly from 1971, when the SE crater was formed.
    Description: This work was developed in the frame of the TecnoLab, the Laboratory for the Technological Advance in Volcano Geophysics organized by INGV-CT, DIEES-UNICT, and DMI-UNICT.
    Description: Published
    Description: 1925-1935
    Description: 1V. Storia e struttura dei sistemi vulcanici
    Description: 2V. Dinamiche di unrest e scenari pre-eruttivi
    Description: 3V. Dinamiche e scenari eruttivi
    Description: 4V. Vulcani e ambiente
    Description: 3IT. Calcolo scientifico e sistemi informatici
    Description: JCR Journal
    Description: restricted
    Keywords: Etna ; probabilistic modeling ; eruption ; 04. Solid Earth::04.04. Geology::04.04.99. General or miscellaneous ; 04. Solid Earth::04.07. Tectonophysics::04.07.99. General or miscellaneous ; 04. Solid Earth::04.08. Volcanology::04.08.99. General or miscellaneous ; 05. General::05.01. Computational geophysics::05.01.02. Cellular automata, fuzzy logic, genetic alghoritms, neural networks ; 05. General::05.01. Computational geophysics::05.01.04. Statistical analysis ; 05. General::05.01. Computational geophysics::05.01.05. Algorithms and implementation ; 05. General::05.02. Data dissemination::05.02.03. Volcanic eruptions
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 12
    Publication Date: 2017-04-04
    Description: 1This study evaluates the Antarctic Circumpolar Wave (ACW) as simulated by the SINTEX coupled model. We found evidence that sea-ice treatment plays a crucial role on simulating the ACW. In particular, SST anomalies at interannual time scales describe a propagating ACW-like pattern when a dynamic thermodynamic sea-ice model is coupled with the ocean, but when sea-ice is relaxed to climatology, anomalies occur as zonally symmetric patterns that do not propagate in longitude. Moreover, from the experiment with an active sea-ice component we saw that ACW-like oscillations are strongly modulated by low frequency variability. Our result adds some extra confidence to previous studies based on relatively short series of observed data.
    Description: This research was supported by the PREDICATE EU project (EVK2 – CT-1999 – 0020,). First author was supported by the PRISM EU project (EVR1 – CT-2001 – 40012).
    Description: Published
    Description: 4A. Clima e Oceani
    Description: JCR Journal
    Description: restricted
    Keywords: Antarctic Circumpolar Wave ; General Circulation Models ; air-ice-sea interactions ; 02. Cryosphere::02.04. Sea ice::02.04.01. Atmosphere/sea ice/ocean interaction
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  • 13
    Publication Date: 2017-04-04
    Description: The instability processes which generate unstable waves with chara- cteristics similar to observed tropical instability waves in the Pacific Ocean are examined through a local energy analysis based on deviations from the time mean flow. Numerical experiments indicate that the waves develop preferentially in the eastern Pacific along the northern temperature front and have a westward phase speed and a structure with two peaks in amplitude: one located on the equator and the other a few degrees north of it. The energy analysis shows that the "two-peak" structure of the eastern waves is explained by two different instability processes which occur at different latitudes. In the time mean sense the region north of the equator is baroclinically unstable, while barotropic instability prevails at the equator. The life cycle of the waves is revealed by the time evolution of the energetics. Baroclinic instability is the dominant triggering mechanism which induces growth of the waves along the northern temperature front. The eddy pressure fluxes radiate energy south of the equator where the rneridional shear between the Equatorial Undercurrent and the South Equatorial Current becomes barotropically unstable. From the numerical simulations, there is evidence of a second unstable region in the central Pacific south of the equator where the instabilities have a lower phase speed. The energy analysis also shows that these waves grow from both barotropic and baroclinic conversions.
    Description: This work was supported by the Department of Com- merce/NOAA under grant NA56GP0026. One of the au- thors (SM) was partially supported by a NASA Global Change Fellowship NGT-30288. Another author (AB) was supported by a UCAR Postdoctoral Fellowship
    Description: Published
    Description: 29637-29661
    Description: 4A. Clima e Oceani
    Description: JCR Journal
    Description: restricted
    Keywords: Ocean modeling ; Equatorial Ocean ; Tropical Instability Waves ; Ocean wave generation ; Ocean wave energetics ; 03. Hydrosphere::03.01. General::03.01.01. Analytical and numerical modeling
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  • 14
    Publication Date: 2017-04-04
    Description: Flank instability at basaltic volcanoes is often related to repeated dike intrusions along rift zones and accompanied by surface fracturing and seismicity. These processes have been mostly studied during specific events, and the lack of longer-term observations hinders their better understanding. Here we analyze ~20 years of deformation of the Pernicana Fault System (PFS), the key structure controlling the instability of the eastern flank of Mt. Etna. We exploit East-West and vertical components of mean deformation velocity, as well as corresponding time series, computed from ERS/ENVISAT (1992–2010) and COSMO-SkyMed (2009–2011) satellite radar sensors via Synthetic Aperture Radar Interferometry techniques. We then integrate and compare this information with field, seismic, and leveling data, collected between 1980 and 2012. We observe transient displacements accompanied by seismicity, overprinted on a long-term background eastward motion (~2 cm/yr). In the last decades, these transient events were preceded by a constant amount of accumulated strain near the PFS. The time of strain accumulation varies between a few years and a few decades, also depending on magma emplacement within the nearby North East Rift, which may increase the strain along the PFS. These results suggest that the amount of deformation near the PFS may be used as a gauge to forecast the occurrence of instability transients on the eastern flank of Etna. In this context, the PFS may provide an ideal, small-scale structure to test the relations between strain accumulation, stress loading, and seismic energy release.
    Description: This work has been partially supported by the Italian Space Agency (ASI) within the SAR4Volcanoes project, agreement I/ 034/11/0.
    Description: Published
    Description: 4398-4409
    Description: 1T. Geodinamica e interno della Terra
    Description: 2T. Tettonica attiva
    Description: 3T. Pericolosità sismica e contributo alla definizione del rischio
    Description: 4T. Fisica dei terremoti e scenari cosismici
    Description: 5T. Sorveglianza sismica e operatività post-terremoto
    Description: 1V. Storia e struttura dei sistemi vulcanici
    Description: 2V. Dinamiche di unrest e scenari pre-eruttivi
    Description: 3V. Dinamiche e scenari eruttivi
    Description: 4V. Vulcani e ambiente
    Description: 6A. Monitoraggio ambientale, sicurezza e territorio
    Description: JCR Journal
    Description: restricted
    Keywords: Volcano flank instability ; Pernicana fault ; Etna ; 04. Solid Earth::04.01. Earth Interior::04.01.99. General or miscellaneous ; 04. Solid Earth::04.03. Geodesy::04.03.99. General or miscellaneous ; 04. Solid Earth::04.04. Geology::04.04.99. General or miscellaneous ; 04. Solid Earth::04.04. Geology::04.04.09. Structural geology ; 04. Solid Earth::04.06. Seismology::04.06.99. General or miscellaneous ; 04. Solid Earth::04.07. Tectonophysics::04.07.99. General or miscellaneous ; 04. Solid Earth::04.08. Volcanology::04.08.99. General or miscellaneous ; 05. General::05.01. Computational geophysics::05.01.99. General or miscellaneous ; 05. General::05.02. Data dissemination::05.02.99. General or miscellaneous ; 05. General::05.08. Risk::05.08.99. General or miscellaneous
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  • 15
    Publication Date: 2017-04-04
    Description: Here I compare estimates of tectonic strain rates from dense Global Positioning System measurements with the seismicity released in the last ~500 years in the Apennines (Italy). The rates of seismic moment accumulation from geodesy and of historical seismic release by earthquakes agree within the uncertainties, ruling out significant aseismic deformation. Within the considered 400 km long section of the Apennines, this balance yields an average recurrence interval of 30–75 years for MW≥6.5 events without requiring a future earthquake larger than those observed historically (MW~7). A minimum estimate of unreleased strain allows MW≥6.5 and MW≥6.9 events to be released in ~35% and ~10% of the central-southern Apennines, respectively. The definition of the seismic potential for smaller events is more uncertain, and their occurrence remains a significant threat throughout the Apennines.
    Description: Published
    Description: 1155–1162
    Description: 2T. Tettonica attiva
    Description: JCR Journal
    Description: restricted
    Keywords: Crustal deformation ; Earthquakes ; GPS ; Apennines ; 04. Solid Earth::04.03. Geodesy::04.03.01. Crustal deformations
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  • 16
    Publication Date: 2017-04-04
    Description: We investigated the evolution of seismicity and deformation in the unstable eastern flank of Etna volcano over a 30 year period (from 1980 to 2012). A significant temporal correlation has been revealed between periods of flank acceleration and intensified seismic activity by comparing seismicity along the northern border (Pernicana fault system) of the sliding flank and the deformation of the eastern flank. Two marked phases have been observed in 1984-1986 and in the years following 2002. These two phases are separated by an intermediate phase from 1987 to 2001, in which the flank sliding slowed down and the seismicity dropped drastically. This common temporal evolution in the deformation rate and seismic release supports the hypothesis that the seismicity in the northern border can be viewed as a marker of the response to accommodate the stress exerted by the traction of the eastern flank sliding. This interplay has also been corroborated by finite element method numerical computations that highlight a good correlation between the seismicity pattern and areas of positive stress changes induced by the sliding surface. The two intense phases of flank acceleration are representative of two main different sources: volcano flank instability stretching the eastern sector in the first 1984-1986 phase and magmatic intrusions pushing the eastern flank seaward since the 2002-2003 eruption. Establishing the relationship between flank acceleration and seismic activation therefore contributes to understanding Etna's mechanical behavior and provides insights into the processes regulating the unstable flank response.
    Description: Published
    Description: 5098-5108
    Description: 1V. Storia e struttura dei sistemi vulcanici
    Description: JCR Journal
    Description: restricted
    Keywords: Pernicana ; fault ; volcano-tectonics ; flank instability ; seismicity and deformation ; stress and strain ; 04. Solid Earth::04.06. Seismology::04.06.01. Earthquake faults: properties and evolution
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 17
    Publication Date: 2017-04-04
    Description: Volcanic eruptions are often accompanied by spatiotemporal migration of ground deformation, a consequence of pressure changes within magma reservoirs and pathways. We modeled the propagation of pressure variations through the east rift zone (ERZ) of K" ılauea Volcano, Hawai‘i, caused by magma " o-Kupaianaha withdrawal during the early eruptive episodes (1983–1985) of the ongoing Pu‘u ‘ O‘" " eruption. Eruptive activity at the Pu‘u ‘ O‘" o vent was typically accompanied by abrupt deflation that lasted for several hours and was followed by a sudden onset of gradual inflation once the eruptive episode had ended. Similar patterns of deflation and inflation were recorded at K" ılauea’s summit, approximately 15 km to the northwest, albeit with time delays of hours. These delay times can be reproduced by modeling the spatiotemporal changes in magma pressure and flow rate within an elastic-walled dike that traverses K" ılauea’s ERZ. Key parameters that affect the behavior of the magma-dike system are the dike dimensions, the elasticity of the wall rock, the magma viscosity, and to a lesser degree the magnitude and duration of the pressure variations themselves. Combinations of these parameters define a transport efficiency and a pressure diffusivity, which vary somewhat from episode to episode, resulting in variations in delay times. The observed variations in transport efficiency are most easily explained by small, localized changes to the geometry of the magma pathway
    Description: Published
    Description: 2232–2246
    Description: 3V. Dinamiche e scenari eruttivi
    Description: JCR Journal
    Description: restricted
    Keywords: magma flow ; dikes ; Kilauea ; elastic rock ; magma-rock coupling ; 04. Solid Earth::04.08. Volcanology::04.08.99. General or miscellaneous
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  • 18
    Publication Date: 2017-04-04
    Description: From December 2005 to January 2006, an anomalous degassing episode was observed at Mount Etna, well-correlated with an increase in volcanic tremor, and in the almost complete absence of eruptive activity. In the same period, more than 10,000 very long period (VLP) events were detected. Through moment tensor inversion analyses of the VLP pulses, we obtained quantitative estimates of the volumetric variations associated with these events. This allowed a quantitative investigation of the relationship between VLP seismic activity, volcanic tremor, and gas emission rate at Mount Etna. We found a statistically significant positive correlation between SO2 gas flux and volcanic tremor, suggesting that tremor amplitude can be used as a first-order proxy for the background degassing activity of the volcano. VLP volumetric changes and SO2 gas flux are correlated only for the last part of our observations, following a slight change in the VLP source depth. We calculate that the gas associated with VLP signal genesis contributed less than 5% of the total gas emission. The existence of a linear correlation between VLP and degassing activities indicates a general relationship between these two processes. The effectiveness of such coupling appears to depend upon the particular location of the VLP source, suggesting that conduit geometry might play a significant role in the VLP-generating process. These results are the first report on Mount Etna of a quantitative relationship between the amounts of gas emissions directly estimated through instrumental flux measurements and the quantities of gas mass inferred in the VLP source inversion.
    Description: Published
    Description: 4910-4921
    Description: 2V. Dinamiche di unrest e scenari pre-eruttivi
    Description: JCR Journal
    Description: restricted
    Keywords: Very Long Period seismicity ; UV scanners network ; Etna Volcano ; volcano monitoring ; 04. Solid Earth::04.02. Exploration geophysics::04.02.06. Seismic methods ; 04. Solid Earth::04.06. Seismology::04.06.03. Earthquake source and dynamics ; 04. Solid Earth::04.06. Seismology::04.06.08. Volcano seismology ; 04. Solid Earth::04.08. Volcanology::04.08.06. Volcano monitoring
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  • 19
    Publication Date: 2017-04-04
    Description: Global positioning system (GPS) and differential interferometric synthetic aperture radar (DInSAR) data, collected from July 2007 to July 2008 on Mt. Etna, are analyzed to define the dynamics preceding and accompanying the onset of the eruption on 13 May 2008. Short- and long-term comparisons have been made on both GPS and radar data, covering similar time windows. Thanks to the availability of three GPS surveys the year before the eruption onset, an increase in the seaward movement of the NE flank of the volcano has been detected in the few months before the dike intrusion. The GPS ground deformation pattern also shows a slight inflation centered on the western side of the volcano in the preeruptive long-term comparison (from July 2007 to May 2008). The GPS has been integrated with DInSAR data by the SISTEM approach, to take advantage of the different methodologies and provide high spatial sampling of the 3-D ground displacement pattern. We inverted the SISTEM results to model the pressure source causing the observed preeruptive inflation. The subsequent emplacement of the eruptive dike was imaged by two GPS surveys carried out on a dense network over the uppermost part of the volcano on 6 and 13 May, i.e., a few days before and a few hours after the beginning of the eruption. We inverted this comparison to define the position, geometry, and kinematics of the dike. The dike intrusion was also imaged by DInSAR data with temporal baselines of 2-3 months, which confirm strong displacements localized on the summit area, rapidly decreasing toward the middle flanks of the volcano, as detected by very short-term GPS data; furthermore, the comparison between DInSAR and GPS data highlighted the presence of a depressurizing source localized beneath the upper southwestern area, acting just after the dike intrusion. Finally, the long-period (1 year) GPS and DInSAR data were integrated by SISTEM to finely depict the 3-D ground deformation pattern with the highest spatial resolution. The long-period data allowed the complex kinematics of the volcano to be finely imaged and highlighting the interaction between flank dynamics and magma injection.
    Description: Published
    Description: 2818-2835
    Description: 3V. Dinamiche e scenari eruttivi
    Description: JCR Journal
    Description: restricted
    Keywords: flank dynamics ; eruption ; volcano-tectonics ; GPS ; DInSAR ; data integration ; Etna ; deformation ; volcano ; fault ; 04. Solid Earth::04.03. Geodesy::04.03.07. Satellite geodesy
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 20
    Publication Date: 2017-04-04
    Description: In January 2011 eruptive activity resumed at Etna producing a new phase with frequent lava fountain episodes until April 2012. In November 2011, the first two borehole strainmeters were installed, which detected negative strain changes (~ 0.15 - 0.8 strain) during the paroxysmal events. A Finite Element Model was set up to estimate accurately the tilt and volumetric strain, taking into account the real profile of the volcano and the elastic medium heterogeneity. The numerical computations indicated an elongated depressurizing source located at 0 km b.s.l., which underwent a volume change of ~2 x 106 m3 which is the most of the magma volume erupted while a smaller remaining part is accommodated by the magma compressibility. This shallow source cannot accumulate large magma volumes and, thus, favours short term periodic eruptive events with a fairly constant balance between the refilling and the erupted magma.
    Description: Published
    Description: 3579-3584
    Description: 2V. Dinamiche di unrest e scenari pre-eruttivi
    Description: JCR Journal
    Description: embargoed_20150613
    Keywords: Etna volcano ; lava fountain eruptions ; shallow plumbing system ; borehole strainmeters ; 05. General::05.02. Data dissemination::05.02.03. Volcanic eruptions
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  • 21
    Publication Date: 2017-04-04
    Description: Here we use continuous GPS observations to document the geodetic strain accumulation across the South-Eastern Alps (NE Italy). We estimate the interseismic coupling on the intracontinental collision thrust fault and discuss the seismic potential and earthquake recurrence. We invert the GPS velocities using the back slip approach to simultaneously estimate the relative angular velocity and the degree of interseismic coupling on the thrust fault that separates the Eastern Alps and the Venetian-Friulian plain. Comparison between the rigid rotation predicted motion and the shortening observed across the area indicates that the South-Eastern Alpine thrust front absorbs about 70% of the total convergence between the Adria and Eurasia plates. The coupling is computed on a north dipping fault following the continuous external seismogenic thrust front of the South-Eastern Alps. The modeled thrust fault is currently locked from the surface to a depth of ≈10 km. The transition zone between locked and creeping portions of the fault roughly corresponds with the belt of microseismicity parallel and to the north of the mountain front. The estimated moment deficit rate is 1.3 ± 0.4 × 1017 Nm/yr. The comparison between the estimated moment deficit and that released historically by the earthquakes suggests that to account for the moment deficit the following two factors or their combination should be considered: (1) a significant part of the observed interseismic coupling is released aseismically and (2) infrequent “large” events with long return period (〉 1000 years) and with magnitudes larger than the value assigned to the largest historical events (Mw≈ 6.7).
    Description: Published
    Description: 4448-4468
    Description: 2T. Tettonica attiva
    Description: JCR Journal
    Description: restricted
    Keywords: Eastern Alps; interseismic coupling; seismotectonics; seismic potential; recurrence time; GPS ; 04. Solid Earth::04.06. Seismology::04.06.11. Seismic risk ; 04. Solid Earth::04.07. Tectonophysics::04.07.01. Continents ; 04. Solid Earth::04.07. Tectonophysics::04.07.04. Plate boundaries, motion, and tectonics ; 04. Solid Earth::04.07. Tectonophysics::04.07.07. Tectonics
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 22
    Publication Date: 2017-04-04
    Description: High-resolution, single-channel seismic and multibeam bathymetry data collected at the Amendolara Ridge, a key submarine area marking the junction between the Apennine collision belt and the Calabrian subduction forearc, reveal active deformation in a supposedly stable crustal sector. New data, integrated with existing multichannel seismic profiles calibrated with oil-exploratory wells, show that middle to late Pleistocene sediments are deformed in growth folds above blind oblique-reverse faults that bound a regional pop-up. Data analysis indicates that ~10 to 20 km long banks that top the ~80 km long, NW-SE trending ridge are structural culminations above en echelon fault segments. Numeric modeling of bathymetry and stratigraphic markers suggests that three 45° dipping upper crustal (2–10 km) fault segments underlie the ridge, with slip rates up to ~0.5 mm/yr. Segments may be capable with M ~ 6.1–6.3 earthquakes, although an unknown fraction of aseismic slip undoubtedly contributes to deformation. The fault array that bounds the southern flank of the ridge (Amendolara Fault System) parallels a belt of Mw 〈 4.7 strike-slip and thrust earthquakes, which suggest current left-oblique reverse motion on the array. The eastern segment of the array shows apparent morphologic evidence of deformation and might be responsible for Mw ≤ 5.2 historic events. Late Pliocene-Quaternary growth of the oblique contractional belt is related to the combined effects of stalling of Adriatic slab retreat underneath the Apennines and subduction retreat of the Ionian slab underneath Calabria. Deformation localization was controlled by an inherited mechanical interface between the thick Apulian (Adriatic) platform crust and the attenuated Ionian Basin crust.
    Description: Published
    Description: 2169–2194
    Description: 2T. Tettonica attiva
    Description: JCR Journal
    Description: partially_open
    Keywords: Active compression ; Growth strata modeling ; High-resolution seismic ; Multibeam bathymetry ; Jonian Sea ; 04. Solid Earth::04.02. Exploration geophysics::04.02.06. Seismic methods ; 04. Solid Earth::04.04. Geology::04.04.01. Earthquake geology and paleoseismology ; 04. Solid Earth::04.04. Geology::04.04.04. Marine geology ; 04. Solid Earth::04.04. Geology::04.04.09. Structural geology ; 04. Solid Earth::04.04. Geology::04.04.10. Stratigraphy
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  • 23
    Publication Date: 2017-04-04
    Description: A 10 Hz sampling frequency GPS station was installed near L'Aquila a few days before the 6 April 2009 Mw 6.1 earthquake. It recorded displacement waveforms during the main shock and the largest Mw 5.4 aftershock of 7 April. The horizontal components of the main shock contain a high-amplitude (43 cm peak-to-peak) nearly harmonic (1 Hz) wave train not evident in other nearby instrumental records. The persistency of this feature during aftershocks recorded by a temporarily colocated seismological station highlights a local site effect. Traditional models based on near-surface velocity structure and topography variations fail to reproduce the size and frequency band of the observed amplified motion. The amplified wave train can be explained by a low-velocity fault zone layer below the station. This model fits the delay of the large-amplitude nearly harmonic wave train after the S wave phase and is consistent with the variation in the fault excitation efficiency between the two shocks in relation to their different source depth and location. Synthetic calculation of trapped waves in a model consisting of two quarter spaces separated by a 650 m wide low-velocity zone with 50% velocity reduction and Q value of 20 fit well the observed anomalous record. The parameters of the model fault zone layer are consistent with geological evidence of a broad damage zone adjacent to the station and a similar site response found in this crustal zone with ambient noise. Results of shallow seismic surveys and sonic logs from deep wells provide independent constraints on the host rock velocities.
    Description: This work has partially benefited from the activities performed in the NERA project (Network of European Research infrastructures for earthquake risk Assessment and mitigation, 262330), funded by the European Commission FP7 program, and in the FIRB-Abruzzo project, funded by the Italian Ministery of Education, University and Research.
    Description: Published
    Description: 490–501
    Description: 2T. Tettonica attiva
    Description: JCR Journal
    Description: restricted
    Keywords: High-rate GPS ; Transient deformation ; L'Aquila earthquake ; fault-guided waves ; 04. Solid Earth::04.06. Seismology::04.06.04. Ground motion
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 24
    Publication Date: 2017-04-04
    Description: We investigated the structure and evolution of the 2010 Eyjafjallajökull volcanic cloud and its dispersal over Iceland and Europe integrating satellite multispectral images and numerical simulations. Data acquired by Medium Resolution Imaging Spectrometer (MERIS)and Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) have been analyzed to quantify the cloud extent and composition. The VOL-CALPUFF dispersal code was applied to reconstruct the transient and 3-D evolution of the cloud. Source parameters estimated on the base of available a posteriori volcanological data sets have been used. Quantitative comparisons between satellite retrievals and modeling results were performed for two selected instants of time during the first and third eruptive phases on a regional scale. Sensitivity of the model to initial volcanological conditions has been analyzed at continental scale. Several complex non intuitive features of cloud dynamics have been highlighted and strengths and limitations of the adopted methods identified. The main findings are: the level of quantitative agreement between satellite observations and numerical results depends on ash cloud composition (particle sizes and concentration) with better agreement for smaller particles and higher concentrations; the agreement between observations and modeling outcomes also depends on the temporal stability of volcanological conditions and the complexity of the meteorological wind field; the irregular dispersion of ash, as reconstructed from satellite data and numerical modeling, can be well explained by the different response of particle sizes to strong vertical wind-shear, and by resuspension processes acting at ground level; eruptive source conditions are the main source of uncertainty in modeling, especially during an ongoing crisis and at long-range scales.
    Description: Published
    Description: 4729–4747
    Description: 3V. Dinamiche e scenari eruttivi
    Description: JCR Journal
    Description: restricted
    Keywords: Volcanic ash cloud ; Satellite retrieval ; Numerical modelling ; Eyjafjallajokull ; Ash dispersal and deposition ; 01. Atmosphere::01.01. Atmosphere::01.01.07. Volcanic effects
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 25
    Publication Date: 2017-04-04
    Description: We use 2.5 to 14 years long position time series from 〉800 continuous Global Positioning System (GPS) stations to study vertical deformation rates in the Euro-Mediterranean region. We estimate and remove common mode errors in position time series using a principal component analysis, obtaining a significant gain in the signal-to-noise ratio of the displacements data. Following the results of a maximum likelihood estimation analysis, which gives a mean spectral index ~ 0.7, we adopt a power law + white noise stochastic model in estimating the final vertical rates and find 95% of the velocities within ±2 mm/yr, with uncertainties from filtered time series ~40% smaller than from the unfiltered ones. We highlight the presence of statistically significant velocity gradients where the stations density is higher. We find undulations of the vertical velocity field at different spatial scales both in tectonically active regions, like eastern Alps, Apennines, and eastern Mediterranean, and in regions characterized by a low or negligible tectonic activity, like central Iberia and western Alps. A correlation between smooth vertical velocities and topographic features is apparent in many sectors of the study area. Glacial isostatic adjustment and weathering processes do not completely explain the measured rates, and a combination of active tectonics and deep-seated geodynamic processes must be invoked. Excluding areas where localized processes are likely, or where subduction processes may be active, mantle dynamics is the most likely process, but regional mantle modeling is required for a better understanding.
    Description: Published
    Description: 6003–6024
    Description: 1T. Geodinamica e interno della Terra
    Description: 2T. Tettonica attiva
    Description: 1R. Reti di monitoraggio e Osservazioni
    Description: JCR Journal
    Description: restricted
    Keywords: GPS ; Geodynamics ; Mediterranean ; Vertical deformation ; 04. Solid Earth::04.03. Geodesy::04.03.01. Crustal deformations ; 04. Solid Earth::04.03. Geodesy::04.03.06. Measurements and monitoring ; 04. Solid Earth::04.03. Geodesy::04.03.07. Satellite geodesy ; 04. Solid Earth::04.07. Tectonophysics::04.07.01. Continents ; 04. Solid Earth::04.07. Tectonophysics::04.07.02. Geodynamics ; 04. Solid Earth::04.07. Tectonophysics::04.07.04. Plate boundaries, motion, and tectonics ; 04. Solid Earth::04.07. Tectonophysics::04.07.06. Subduction related processes
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  • 26
    Publication Date: 2017-04-04
    Description: In this study we present new high-resolution, regional-scale, Vp and Vp/Vs models of the northern-central Apennines along with accurate 3-D locations of a large set of local earthquakes. The main velocity anomalies are consistent with the surface geology in the shallow layers and present evidence for fluids stored within the basement at greater depths beneath the extensional belt. The Adria and Tyrrhenian mantle are defined by positive velocity anomalies below 30 km depth, while a low-Vp, high-Vp/Vs region in between indicates the existence of a hydrated wedge. The results yield new constraints on active processes in the Apennines and more generally envisage the evolution of a postcollisional belt. Velocity anomalies and earthquakes are consistent with a complex system of delamination and sinking of the Adria continental lithosphere, with the peeling of the crust identified by intermediate-depth seismicity. Change of seismicity and structural patterns along the belt indicates that this tectonic process is diachronous and that fluids, released by sunken lithosphere, are stored within the crust, conditioning the occurrence of seismicity and the onset of extension.
    Description: Published
    Description: 5391-5403
    Description: 1T. Geodinamica e interno della Terra
    Description: JCR Journal
    Description: restricted
    Keywords: Local earthquake tomography ; tectonic of Apennines ; 04. Solid Earth::04.06. Seismology::04.06.07. Tomography and anisotropy
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  • 27
    Publication Date: 2017-04-04
    Description: The 23 November 2013 lava fountain at Etna volcano was the most explosive of the last 44 episodes that have occurred at Etna in 2011–2013. We infer the total magma volume erupted by thermal images analysis and show that it was characterized by a very high time-averaged-discharge-rate (TADR) of ~360m3 s 1, having erupted ~1.6 × 106m3 of dense-rock equivalent magma volume in just 45 min, which is more than 3 times the TADR observed during previous episodes. Two borehole dilatometers confirmed the eruption dynamics inferred from the thermal images. When compared to the other lava fountains, this episode can be considered as the explosive end-member. However, the erupted volume was still comparable to the other lava fountain events. We interpret that the 23 November explosive end-member event was caused by more primitive and gas-rich magma entering the system, as demonstrated by the exceptional height reached by the lava fountain.
    Description: Published
    Description: 4912–4919
    Description: 3V. Dinamiche e scenari eruttivi
    Description: JCR Journal
    Description: restricted
    Keywords: Etna eruption ; paroxysmal explosive eruption ; lava fountain ; strainmeters ; lava fountain volume ; 04. Solid Earth::04.08. Volcanology::04.08.06. Volcano monitoring
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  • 28
    Publication Date: 2017-04-04
    Description: We investigate numerically the passage of spontaneous, dynamic in-plane shear ruptures from initiation to their final rupture speed, using very fine grids. By carrying out more than 120 simulations, we identify two different mechanisms controlling supershear transition. For relatively weaker faults, the rupture speed always passes smoothly and continuously through the range of speeds between the Rayleigh and shear wave speeds (the formerly considered forbidden zone of rupture speeds). This, however, occurs in a very short time, before the ruptures reach the compressional wave speed. The very short time spent in this range of speeds may explain why a jump over these speeds was seen in some earlier numerical and experimental studies and confirms that this speed range is an unstable range, as predicted analytically for steady state, singular cracks. On the other hand, for relatively stronger faults, we find that a daughter rupture is initiated by the main (mother) rupture, ahead of it. The mother rupture continues to propagate at sub-Rayleigh speed and eventually merges with the daughter rupture, whose speed jumps over the Rayleigh to shear wave speed range. We find that this daughter rupture is essentially a “pseudorupture,” in that the two sides of the fault are already separated, but the rupture has negligible slip and slip velocity. After the mother rupture merges with it, the slip, the slip velocity, and the rupture speed become dominated by those of the mother rupture. The results are independent of grid sizes and of methods used to nucleate the initial rupture.
    Description: Published
    Description: 8331–8345
    Description: 4T. Fisica dei terremoti e scenari cosismici
    Description: JCR Journal
    Description: open
    Keywords: Seismic source ; Supershear ruptures ; 04. Solid Earth::04.04. Geology::04.04.06. Rheology, friction, and structure of fault zones
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  • 29
    Publication Date: 2017-10-06
    Description: We report on an extensive paleomagnetic study (36 sites) of the Tuscan Nappe succession from the Northern Apennines Arc, aimed to reconstruct the tectonic evolution of the internal sector of this chain. We analyzed Eocene pelagic foreland ramp deposits (Scaglia Toscana Formation) and Oligocene–lower Miocene siliciclastic turbidites (Macigno and Falterona Formations). Paleomagnetic results show that the internal sector of the Northern Apennines underwent large counterclockwise (CCW) rotations with respect to the Adria-Africa foreland. A decrease in the rotation magnitude was observed from the southern to the northern sector of the arc (from 91 to 36°). This trend is opposite to that observed in the more external units of Northern Apennines and demonstrates that the oroclinal bending model, which has been proposed for the external units of the chain, is not appropriate to explain the evolution of the internal sector of the arc. On the basis of the observed paleomagnetic pattern, we propose a new tectonic model in which the Tuscan and Falterona-Cervarola units in the southern area were first rotated CCW along with the Corsica-Sardinia block during its lower Miocene rotational drifting and were later involved in the main phases of rotational emplacement and translation toward the outermost sector (Umbria domain), thus yielding the final curved shape of the Northern Apennines chain. Data from this study represent the first paleomagnetic evidence of the influence of the Corsica-Sardinia CCW rotation in the Apennines orogenic wedge deformation, in the general framework of the geodynamic evolution of the Central Mediterranean subduction system.
    Description: Published
    Description: 374-392
    Description: 1A. Geomagnetismo e Paleomagnetismo
    Description: JCR Journal
    Description: restricted
    Keywords: paleomagnetism, Apennines, Tuscany ; 04. Solid Earth::04.05. Geomagnetism::04.05.06. Paleomagnetism
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  • 30
    Publication Date: 2019-12-05
    Description: While ascending in the plumbing system of volcanoes, magma undergoes decompression at rates spanning several orders of magnitude and set by a number of factors internal and external to the volcano. Slow decompression generally results in an effusive or mildly explosive expansion of the magma, but counterexamples of sudden switches from effusive to explosive eruptive behaviour have been documented at various volcanoes worldwide. The mechanisms involved in this behavior are currently debated, in particular regarding basaltic magmas. Here, we explore the interplay between decompression rate and vesiculation vigour by decompressing a magma analog obtained by dissolving pine resin into acetone in varying proportions. Our mixtures contain solid particles and upon decompression experience the nucleation of acetone bubbles. We find mixtures high in acetone, containing smaller and fewer solid particles, experience strong supersaturation and fragment for very slow decompressions, despite having low viscosity, while mixtures low in acetone, with more and larger solid particles degas efficiently. We interpret our results in terms of delayed bubble nucleation due to a lack of efficient nucleation sites. We discuss how a similar mechanism might induce violent, explosive expansion in volatile-rich and poorly crystalline low-silica magmas, by analogy to previous inferences for rhyolitic magmas.
    Description: Published
    Description: 3067-3084
    Description: 2V. Dinamiche di unrest e scenari pre-eruttivi
    Description: JCR Journal
    Description: embargoed_20150613
    Keywords: Magma fragmentation ; basaltic magma ; analog laboratory experiments ; slow decompression ; bubble nucleation ; explosive volcanic eruptions ; 04. Solid Earth::04.08. Volcanology::04.08.02. Experimental volcanism
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  • 31
    Publication Date: 2020-02-24
    Description: Seasonal or winter anomaly in the F2 layer has been known since the beginning of regular ionospheric observations [e.g., Berkner and Wells, 1938, and references therein], and one may be sure that such a fundamental feature of this phenomenon as its height extent has been analyzed. However, Lee et al. [2011] using radio occultation Constellation Observing System for Meteorology, Ionosphere, and Climate (COSMIC) Ne(h) observations have decided to reconsider this problem starting from the very beginning without any analyses of previous investigations and comparisons to earlier obtained results as if ionospheric F2 layer physics has started with them. Besides, the authors have done some incorrect statements which contradict the present theory of the ionospheric F2 layer. They claim that “The topside plasma density is greater in the summer hemisphere than in the winter hemisphere; … the electron density below the F peak at middle latitudes is also greater during summer than during winter; Therefore, the seasonal anomalous behavior is a phenomenon only near the F-peak height in the Northern Hemisphere; The question is why the seasonal behavior of the ionosphere near the F-peak height is different from the behavior below and above the F peak. ….there was no explanation for the different seasonal behaviors of electron density in the lower F region and at F-peak height”. This is the main contents and results of the paper. Let us consider what was known about winter anomaly before the paper by Lee et al. [2011].
    Description: Published
    Description: 7972–7978
    Description: 2A. Fisica dell'alta atmosfera
    Description: JCR Journal
    Description: restricted
    Keywords: December anomaly, ionosphere ; 01. Atmosphere::01.02. Ionosphere::01.02.99. General or miscellaneous
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  • 32
    Publication Date: 2020-02-24
    Description: On July 17,2001, lava began pouring down the slopes of Mt. Etna in Sicily signaling the start of the volcano's first flank eruption in nearly 10 years. Etna typically experiences long periods of explosive and effusive activity at the summit, which lies 3350 m a.s.l., interspersed with shorter flank eruptions. During the latter, large volumes of lava can threaten local populations. The Catania Section of the Istituto Nazionale di Geofisica e Vulcanologia (INGV) routinely monitors the volcano with an array of integrated multidisciplinary techniques. During the 2001 flank eruption, researchers obtained the deepest insight yet into the mechanisms that control this fascinating volcano. In particular, by studying ground deformation, seismicity, gravity changes, and geomagnetism, researchers were able to forecast 3 to 4 days in advance the intrusion of a new feeder dike in the upper part of the volcano and follow the propagation of dike emplacement and fissure opening, as well as estimate the volume of the intrusion. During the eruption, volcanology gas geochemistry and petrology were used to distinguish two different magmas erupting at the same time from both this new feeder dike and the summit feeding system, which has been active since January 2001. Effusion rate measurements and thermal mapping of the flow field provided insight into the maximum length the lava flow could reach from the lower vent, and researchers were able to follow the process of tube formation along this flow. The previous flank eruption on Etna occurred between 1991 and 1993, when 235 million of lava poured from within the Valle del Bove (VDB) and formed a lava flow field over 8.5 km long that threatened the town of Zafferana. Since then, eruptive activity at Etna has been restricted to the summit area. A progressive increase in the activity occurred between June 1998 and February 1999, with a succession of 21 paroxysmal episodes from the Southeast Cone (SEC). Then, on February 1999, a fire fountain episode from the SEC indicated the start of the 1999 summit eruption, which produced two lava flow fields. During 2000, there were 66 fire fountain events from the SEC accompanied by small lava flows. Lava flow emission started again from the north base of the SEC in January 2001, and on May 9,2001, small fire fountaining episodes were observed on the summit and northern flank of the SEC.This activity gradually increased in frequency and intensity before the 2001 flank eruption.
    Description: Published
    Description: 653-656
    Description: 3V. Dinamiche e scenari eruttivi
    Description: N/A or not JCR
    Description: restricted
    Keywords: Etna eruption ; volcano monitoring ; 04. Solid Earth::04.08. Volcanology::04.08.06. Volcano monitoring
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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    Publication Date: 2020-02-24
    Description: A method for foF2 short-term forecast over Europe has been developed and implemented in the EUROMAP model. The input-driving parameters are 3 h ap indices (converted to ap(τ)), effective ionospheric T index, and real-time foF2 observations. The method includes local (for each station) regression storm models to describe strong negative disturbances under ap(τ)〉30 and training models to describe foF2 variations under ap(τ) ≤ 30. The derived model was tested in two regimes: descriptive when observed 3 h ap indices were used and real forecast when predicted daily Ap were used instead of 3 h ap indices—. In the case of strong negative disturbances the EUROMAP model demonstrates on average the improvement over the lnternational Reference Ionosphere STORM-time correction model (IRI(STORM)) model: 40% in winter, 24% in summer, and 39% in equinox. The average improvement over climatology is 41% in winter, 59% in summer, and 55% in equinox. In the majority of cases this difference is statistically significant. In the case of strong positive disturbances, higher-latitude stations also manifest a significant difference between the twomodels but this difference is insignificant at lower latitude stations. The substitution of 3 h ap input indices for the predicted daily Ap ones decreases the foF2 prediction accuracy in the case of negative disturbances but practically has no effect with positive disturbances. In both cases the proposed method manifests better accuracy than the IRI(STORM) model provides. The obtained results show a real opportunity to provide foF2 forecast with the (1–24 h) lead time on the basis of predicted Ap indices
    Description: Published
    Description: 253-270
    Description: 2A. Fisica dell'alta atmosfera
    Description: JCR Journal
    Description: restricted
    Keywords: forecast ; 01. Atmosphere::01.02. Ionosphere::01.02.03. Forecasts
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 34
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    American Geophysical Union
    In:  EPIC3Geophysical Research Letters, American Geophysical Union, 41(22), pp. 7942-7949, ISSN: 00948276
    Publication Date: 2019-07-16
    Description: It has been suggested that an increased melting of continental ice in the Amundsen Sea (AS) and Bellingshausen Sea (BS) is a likely source of the observed freshening of Ross Sea (RS) water. To test this hypothesis, we simulate the spreading of glacial meltwater using the Finite Element Sea Ice/Ice Shelf/Ocean Model. Based on the spatial distribution of simulated passive tracers, most of the basal meltwater from AS ice shelves flows toward the RS with more than half of the melt originating from the Getz Ice Shelf. Further, the model results show that a slight increase of the basal mass loss can substantially intensify the transport of meltwater into the RS due to a strengthening of the melt-driven shelf circulation and the westward flowing coastal current. This supports the idea that the basal melting of AS and BS ice shelves is one of the main sources for the RS freshening.
    Repository Name: EPIC Alfred Wegener Institut
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  • 35
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    American Geophysical Union
    In:  EPIC3American Geophysical Union Fall Meeting, San Francisco, CA, USA, 2014-12-15-2014-12-19Washington, D. C., USA, American Geophysical Union
    Publication Date: 2015-01-05
    Description: The subarctic North Pacific and its marginal seas constitute a key area in which rapid environmental changes over the past decades have been observed in instrumental records, like sea ice decreases, or alterations of nutrient inventories and oxygenation of mid-depth water masses. However, knowledge about the past climatic and oceanographic variability beyond instrumental time series in the subarctic North Pacific and its marginal seas is limited. Few temporally and spatially well-resolved high-resolution and spatially well datasets exist, with spatial and temporal coverage being insufficient to gain a detailed picture of past variations. Our proxydata-based study focuses on a collection of sediment records from the Okhotsk Sea as major source area for well ventilated North Pacific Intermediate Water (NPIW) that cover the last ca. 12,000 years with high temporal and adequate spatial resolution. We decipher rapid changes in NPIW ventilation patterns on centennial to millennial time scales and show that the current ventilation of the mid-depth North Pacific has likely only been prevalent for the last 2 ka. We further provide evidence for a Mid-Holocene shift in mid-depth NPIW ventilation characteristics. Additionally, changes in North Atlantic Deep Water flow speed and patterns are reflected in our records of North Pacific mid-depth water mass dynamics, thus indicating a hemispheric-wide connection between the Atlantic and Pacific regions during the Holocene. Planktic oxygen isotope data suggest a high variability in the stratification of local surface water masses and the formation of sea ice, influencing the formation of new, well ventilated water masses near to our core sites. We compare the main Holocene baseline changes evidenced in our proxy reconstructions to Early Holocene and Pre-Industrial time slice results from the fully-coupled MPI-ESM (COSMOS) Earth System Model, with a focus on the Pacific Ocean to better understand NPIW and upper ocean dynamic changes.
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  • 36
    Publication Date: 2020-03-05
    Description: In this paper we present one year of meteorological and flux measurements obtained near Ny-Ålesund, Spitsbergen. Fluxes are derived by the eddy covariance method and by a hydrodynamic model approach (HMA) as well. Both methods are compared and analyzed with respect to season and mean wind direction. Concerning the wind field we find a clear distinction between 3 prevailing regimes (which have influence on the flux behavior) mainly caused by the topography at the measurement site. Concerning the fluxes we find a good agreement between the HMA and the eddy covariance method in cases of turbulent mixing in summer but deviations at stable conditions, when the HMA almost always shows negative fluxes. Part of the deviation is based on a dependence of HMA fluxes on friction velocity and the influence of the molecular boundary layer. Moreover, the flagging system of the eddy covariance software package TK3 is briefly revised. A new quality criterion for the use of fluxes obtained by the eddy covariance method, which is based on integral turbulence characteristics, is proposed.
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    American Geophysical Union
    In:  EPIC3Workshop at the Institute for Snow and Avalanche Research, EOS, Davos, Switzerland, American Geophysical Union
    Publication Date: 2019-07-17
    Description: From 2-4 April 2014 about 50 researchers attended the workshop „Liquid water in snow – measurements techniques and modeling approaches“ that took place at the Institute for Snow and Avalanche Research (SLF) in Davos, Switzerland – the first one since 1982 in Innsbruck, Austria. This is the report thereof.
    Repository Name: EPIC Alfred Wegener Institut
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  • 38
    Publication Date: 2014-08-03
    Description: The modern polar cryosphere reflects an extreme climate state with profound temperature gradients towards high-latitudes. It developed in association with stepwise Cenozoic cooling, beginning with ephemeral glaciations and the appearance of sea ice in the late middle Eocene. The polar ocean gateways played a pivotal role in changing the polar and global climate, along with declining greenhouse gas levels. The opening of the Drake Passage finalized the oceanographic isolation of Antarctica, some 40 Ma ago. The Arctic Ocean was an isolated basin until the early Miocene when rifting and subsequent sea-floor spreading started between Greenland and Svalbard, initiating the opening of the Fram Strait / Arctic-Atlantic Gateway (AAG). Although this gateway is known to be important in Earth’s past and modern climate, little is known about its Cenozoic development. However, the opening history and AAG’s consecutive widening and deepening must have had a strong impact on circulation and water mass exchange between the Arctic Ocean and the North Atlantic. To study the AAG’s complete history, ocean drilling at two primary sites and one alternate site located between 73°N and 78°N are proposed. These sites will provide unprecedented sedimentary records that will unveil (1) the history of shallow-water exchange between the Arctic Ocean and the North Atlantic, and (2) the development of the AAG to a deep-water connection and its influence on the global climate system. The specific overarching goals of our proposal are to study: • the influence of distinct tectonic events in the development of the AAG and the formation of deep water passage on the North Atlantic and Arctic paleoceanography, and • the role of the AAG in the climate transition from the Paleogene greenhouse to the Neogene icehouse for the long-term (~50 Ma) climate history of the northern North Atlantic.
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  • 39
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    American Geophysical Union
    In:  EPIC3AGU Fall Meeting, San Francisco, CA, USA, 2014-12-14-2014-12-19American Geophysical Union
    Publication Date: 2022-09-29
    Description: The Mid Pleistocene Transition (MPT) constitutes a fundamental shift in Earth's climate system from a 41 ka to a 100 ka periodicity in glacial oscillations. The exact timing and mechanism(s) that caused this change from a low- to high-amplitude glacial variability are still under debate and only recently Pena & Goldstein (2014) suggested that a disruption of the thermohaline circulation at about 900 ka BP and a subsequent change in ocean circulation might have acted as a trigger for the onset of 100 ka glacial-interglacial cycles. Most studies targeting the MPT are based on Atlantic sediment records whereas only few data sets are available from the North Pacific (see e.g. Clark et al., 2006 and McClymont et al., 2013 for reviews). IODP Expedition 341 distal deep-water site U1417 in the Gulf of Alaska (subpolar NE Pacific) now provided a continuous sediment record for reconstructing Miocene to Late Pleistocene changes in the sea surface conditions and how these relate to orbital and millennial scale climate variability. Here we present organic geochemical biomarker data covering the 1.5 Ma to 0.1 Ma time interval with special focus on the MPT. Alkenone, sterol, n-alkane and C25 highly branched isoprenoid data are used to reconstruct sea surface temperatures, primary productivity and terrigenous organic matter input (via sea ice, icebergs, meltwater discharge or aeolian transport). In addition, the diatom concentration and the species composition of the diatom assemblage deliver information on changes in palaeoproductivity and nutrient (silicate) availability. A major change in the environmental setting between 1.2 and 0.8 Ma is recorded by the biomarkers. This shift seems to be associated with a significant cooling of the surface waters in the Gulf of Alaska. Matching this shift, a significant change in the main components of the diatom community occurred between 1.2 and 0.8 Ma. References Clark, P.U., Archer, D., Pollard, D., Blum, J.D., Rial, J.A., Brovkin, V., Mix, A.C., Pisias, N.G., Roy, M., 2006. Quaternary Science Reviews, 25, (23–24), 3150-3184. McClymont, E.L., Sosdian, S.M., Rosell-Melé, A., Rosenthal, Y., 2013. Earth-Science Reviews, 123, 173-193. Pena, L.D. and Goldstein, S.L., 2014. Science, 345, 318-322.
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  • 40
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    American Geophysical Union
    In:  EPIC3AGU Fall Meeting, San Francisco, CA, USA, 2014-12-14-2014-12-19American Geophysical Union
    Publication Date: 2022-09-29
    Description: Since the Pliocene, global climate history is distinguished by the transition into a colder world, dominated by the onset and intensification of major Northern Hemisphere glaciations which have also changed in their duration and intensity. Potential drivers for these events include falling atmospheric CO2, progressive sub-glacial erosion, tectonic uplift, and associated feedbacks. At present, isolating climate as the driver of evolving continental ice volume since the Pliocene is hindered by the limited long term data sets which directly link climate changes to evidence for ice-sheet advance/retreat, erosion, and tectonic evolution over million year timescales. IODP Expedition 341 drilled a cross-margin transect in the Gulf of Alaska from ice-proximal sites on the continental shelf to distal sites in the deep Pacific. This study focuses on the distal site (Site U1417, c.4190 m water depth) which contains variable biogenic and terrigenous contributions, and evidence for deposition through pelagic, mass movement and glacial processes. Our aim is to investigate links between north-east Pacific paleoceanography and the history of the north-west Cordilleran ice sheet, neither of which are fully understood given limited data pre-dating the Last Glacial Maximum. We reconstruct SSTs during the mid-Pliocene, Plio-Pleistocene Transition (PPT) and mid-Pleistocene transition (MPT) using the UK37’ index. We consider the interaction between SSTs and primary production by examining the absolute and relative abundances of plankton biomarkers (e.g. for haptophytes, diatoms and dinoflagellates), carbon/nitrogen ratios, stable isotopes (δ13C, δ15N) and diatom assemblages. Links between these climatic events and the north-west Cordilleran ice-sheet advance/retreat history are initially made using shipboard stratigraphy; emerging data sets on ice-rafting from members of the Expedition 341 Scientific Party will refine these relationships.
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    American Geophysical Union
    In:  EPIC3AGU Fall Meeting, San Francisco, CA, USA, 2014-12-14-2014-12-19American Geophysical Union
    Publication Date: 2022-09-29
    Description: The last transition from full glacial to current interglacial conditions was accompanied by distinct short-term climate fluctuations caused by changes in the global ocean circulation system. Most palaeoceanographic studies focus on the documentation of the behaviour of the Atlantic Meridional Overturning Circulation (AMOC) during the last deglaciation in response to freshwater forcing events. In this respect, the role of Arctic sea ice remained relatively unconsidered - primarily because of the difficulty of its reconstruction. Here we present new proxy data on late glacial (including the Last Glacial Maximum; LGM) and deglacial sea ice variability in the Arctic Ocean and its main gateway - the Fram Strait - and how these changes in sea ice coverage contributed to AMOC perturbations observed during Heinrich Event 1 and the Younger Dryas. Recurrent short-term advances and retreats of sea ice in Fram Strait, prior and during the LGM, are in line with a variable (or intermittent) North Atlantic heat flow along the eastern corridor of the Nordic Seas. Possibly in direct response to the initial freshwater discharge from melting continental ice-sheets, a permanent sea ice cover established only at about 19 ka BP (i.e. post-LGM) and lasted until 17.6 ka BP, when an abrupt break-up of this thick ice cover and a sudden discharge of huge amounts of sea ice and icebergs through Fram Strait coincided with the weakening of the AMOC during Heinrich Event 1. Similarly, another sea ice maximum at about 12.8 ka BP is associated with the slowdown of the AMOC during the Younger Dryas. The new data sets clearly highlight the important role of Arctic sea ice for the re-organisation of the oceanographic setting in the North Atlantic during the last deglaciation. Further studies and sensitivity experiments to identify crucial driving (and feedback) mechanisms within the High Latitude ice-ocean-atmosphere system will contribute the understanding of rapid climate changes.
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  • 42
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    American Geophysical Union
    In:  EPIC3AGU Fall Meeting, San Francisco, CA, USA, 2014-12-14-2014-12-19American Geophysical Union
    Publication Date: 2022-09-29
    Description: Reconstructing the timing and nature of past changes in aquatic productivity in the Gulf of Alaska (GoA) can shed light on the primary processes driving biogeochemical cycling over geologic timescales. Here, we present sedimentologic, physical property, stable isotope, and biogenic opal concentration data from IODP Expedition 341 Sites U1417 and U1419 and identify intervals where diatom ooze lithofacies and geochemical evidence for increased algal productivity are prevalent during the Pleistocene. Sites U1417 and U1419 are located in the center and the margin of the Fe-limited GoA, respectively, and they offer the potential to characterize past changes in biogeochemical cycling during different Pleistocene time intervals. Site U1419 cores were collected from a small slope basin at the edge of the continental shelf. Sediment cores reveal two prominent ~6-m-thick intervals of diatomaceous ooze. Between these intervals are numerous 20-cm-thick sections of biogenic-rich sediment, interbedded with gray mud that commonly contains lonestones. Based on preliminary age models, the two diatom ooze intervals likely correspond to the Holocene and MIS 3, while the intervening interbedded glacigenic and biogenic sediment can broadly be ascribed to MIS 2. Diatomaceous ooze and diatom-rich sediments are generally characterized by lower magnetic susceptibility, natural gamma ray, bulk density, and higher b* color reflectance. Initial C & N concentration and stable isotopic data show elevated concentrations and more positive stable isotope values during the Holocene and MIS 3, which approximate the isotopic signature of modern phytoplankton measured in the GoA. Within the glacial period, the biogenic-rich intervals are also characterized by more positive C and N isotopic values. When combined with the shipboard physical property data, the stable isotopic results are indicative of millennial-scale variations in productivity and/or changes in glacial ice extent in the GoA during the last glacial period. We will discuss these results in the context of an improved isotope stratigraphy and ongoing work examining multiple interglacial productivity variations at Site U1417.
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    Public Library of Science (PLoS)
    In:  PLoS ONE vol. 9 no. 12, pp. e115750-e115750
    Publication Date: 2024-01-12
    Keywords: Multidisciplinary
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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    Publication Date: 2014-04-01
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    Publication Date: 2014-12-08
    Description: Bio-optical variables in the Northern Gulf of California were analyzed using in situ and satellite data obtained during a cruise in June 2008. The study area was divided into three bio-optical regions: Upper Gulf (UG), Northern Gulf (NG), and Great Isles (GI). Each region was characterized according to phytoplankton pigment concentration, phytoplankton and nonpigmented material spectral absorption coefficients, and spectral reflectance. Observed patterns were an indication of the shift in bio-optical conditions from north to south going from turbid and eutrophic waters to mesotrophic ones. Although there was a good agreement between satellite and in situ Chla (RMSE ±33%), an overestimation of in situ Chla was observed. This was partly explained by the presence of nonalgal particles, as well as the influence of desert and continental aerosols, which is generally overcorrected in the standard processing. The UG and NG could be considered as Case  2 waters, but they did exhibit different bio-optical characteristics. This implies that both biological and optical properties should be invoked to better understand water reflectance variability in the study region and its implications for the remote sensing of Chla and biogeochemical processes.
    Print ISSN: 1687-9406
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    Topics: Geosciences
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    Publication Date: 2014-12-08
    Description: Consensus of continuous-time single-integrator multiagent systems with inherent nonlinear dynamics and measurement noises is addressed in this paper. The consensus controller is developed for directed interaction topologies. Each agent’s control input is constructed based on its own state and its neighbors’ states corrupted by noises. The control input contains a time-varying consensus gain in order to attenuate the noises. Conditions for ensuring mean square convergence under noisy measurement and asymptotic convergence in the noise-free case are derived. Finally, some simulations were carried out to show the effectiveness of our control law and how it can solve the consensus problem.
    Print ISSN: 1024-123X
    Electronic ISSN: 1563-5147
    Topics: Mathematics , Technology
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    Publication Date: 2014-12-08
    Description: The purpose of this literature review was to describe the main features of phantom eye syndrome in relation to their possible causes, symptoms, treatments, and influence of eye amputation on quality of life of anophthalmic patients. For this, a bibliographical research was performed in Pubmed database using the following terms: “eye amputation,” “eye trauma,” “phantom eye syndrome,” “phantom pain,” and “quality of life,” associated or not. Thirteen studies were selected, besides some relevant references contained in the selected manuscripts and other studies hallowed in the literature. Thus, 56 articles were included in this review. The phantom eye syndrome is defined as any sensation reported by the patient with anophthalmia, originated anophthalmic cavity. In phantom eye syndrome, at least one of these three symptoms has to be present: phantom vision, phantom pain, and phantom sensations. This syndrome has a direct influence on the quality of life of the patients, and psychological support is recommended before and after the amputation of the eyeball as well as aid in the treatment of the syndrome. Therefore, it is suggested that, for more effective treatment of phantom eye syndrome, drug therapy should be associated with psychological approach.
    Electronic ISSN: 1537-744X
    Topics: Natural Sciences in General
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  • 72
    Publication Date: 2014-12-12
    Description: by Sheng Sun, R. Blake Billmyre, Piotr A. Mieczkowski, Joseph Heitman In fungi, unisexual reproduction, where sexual development is initiated without the presence of two compatible mating type alleles, has been observed in several species that can also undergo traditional bisexual reproduction, including the important human fungal pathogens Cryptococcus neoformans and Candida albicans . While unisexual reproduction has been well characterized qualitatively, detailed quantifications are still lacking for aspects of this process, such as the frequency of recombination during unisexual reproduction, and how this compares with bisexual reproduction. Here, we analyzed meiotic recombination during α-α unisexual and a-α bisexual reproduction of C. neoformans . We found that meiotic recombination operates in a similar fashion during both modes of sexual reproduction. Specifically, we observed that in α-α unisexual reproduction, the numbers of crossovers along the chromosomes during meiosis, recombination frequencies at specific chromosomal regions, as well as meiotic recombination hot and cold spots, are all similar to those observed during a-α bisexual reproduction. The similarity in meiosis is also reflected by the fact that phenotypic segregation among progeny collected from the two modes of sexual reproduction is also similar, with transgressive segregation being observed in both. Additionally, we found diploid meiotic progeny were also produced at similar frequencies in the two modes of sexual reproduction, and transient chromosomal loss and duplication likely occurs frequently and results in aneuploidy and loss of heterozygosity that can span entire chromosomes. Furthermore, in both α-α unisexual and a-α bisexual reproduction, we observed biased allele inheritance in regions on chromosome 4, suggesting the presence of fragile chromosomal regions that might be vulnerable to mitotic recombination. Interestingly, we also observed a crossover event that occurred within the MAT locus during α-α unisexual reproduction. Our results provide definitive evidence that α-α unisexual reproduction is a meiotic process similar to a-α bisexual reproduction.
    Print ISSN: 1553-7390
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    Public Library of Science (PLoS)
    Publication Date: 2014-12-12
    Description: by Marcus Feldman
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  • 74
    Publication Date: 2014-12-12
    Description: by Jie Liu, Xiliu Cheng, Da Liu, Weihui Xu, Roger Wise, Qian-Hua Shen Barley ( Hordeum vulgare L.) Mla alleles encode coiled-coil (CC), nucleotide binding, leucine-rich repeat (NB-LRR) receptors that trigger isolate-specific immune responses against the powdery mildew fungus, Blumeria graminis f. sp. hordei ( Bgh ). How Mla or NB-LRR genes in grass species are regulated at post-transcriptional level is not clear. The microRNA family, miR9863, comprises four members that differentially regulate distinct Mla alleles in barley. We show that miR9863 members guide the cleavage of Mla1 transcripts in barley, and block or reduce the accumulation of MLA1 protein in the heterologous Nicotiana benthamiana expression system. Regulation specificity is determined by variation in a unique single-nucleotide-polymorphism (SNP) in mature miR9863 family members and two SNPs in the Mla miR9863-binding site that separates these alleles into three groups. Further, we demonstrate that 22-nt miR9863s trigger the biogenesis of 21-nt phased siRNAs (phasiRNAs) and together these sRNAs form a feed-forward regulation network for repressing the expression of group I Mla alleles. Overexpression of miR9863 members specifically attenuates MLA1, but not MLA10-triggered disease resistance and cell-death signaling. We propose a key role of the miR9863 family in dampening immune response signaling triggered by a group of MLA immune receptors in barley.
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  • 75
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    Public Library of Science (PLoS)
    Publication Date: 2014-12-12
    Description: by Saheed Imam, Daniel R. Noguera, Timothy J. Donohue Photosynthesis is a crucial biological process that depends on the interplay of many components. This work analyzed the gene targets for 4 transcription factors: FnrL, PrrA, CrpK and MppG (RSP_2888), which are known or predicted to control photosynthesis in Rhodobacter sphaeroides . Chromatin immunoprecipitation followed by high-throughput sequencing (ChIP-seq) identified 52 operons under direct control of FnrL, illustrating its regulatory role in photosynthesis, iron homeostasis, nitrogen metabolism and regulation of sRNA synthesis. Using global gene expression analysis combined with ChIP-seq, we mapped the regulons of PrrA, CrpK and MppG. PrrA regulates ∼34 operons encoding mainly photosynthesis and electron transport functions, while CrpK, a previously uncharacterized Crp-family protein, regulates genes involved in photosynthesis and maintenance of iron homeostasis. Furthermore, CrpK and FnrL share similar DNA binding determinants, possibly explaining our observation of the ability of CrpK to partially compensate for the growth defects of a ΔFnrL mutant. We show that the Rrf2 family protein, MppG, plays an important role in photopigment biosynthesis, as part of an incoherent feed-forward loop with PrrA. Our results reveal a previously unrealized, high degree of combinatorial regulation of photosynthetic genes and significant cross-talk between their transcriptional regulators, while illustrating previously unidentified links between photosynthesis and the maintenance of iron homeostasis.
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  • 76
    Publication Date: 2014-12-12
    Description: by Simon R. F. Warburton-Pitt, Malan Silva, Ken C. Q. Nguyen, David H. Hall, Maureen M. Barr Cilia are microtubule-based cellular organelles that mediate signal transduction. Cilia are organized into several structurally and functionally distinct compartments: the basal body, the transition zone (TZ), and the cilia shaft. In vertebrates, the cystoprotein Inversin localizes to a portion of the cilia shaft adjacent to the TZ, a region termed the “Inversin compartment” (InvC). The mechanisms that establish and maintain the InvC are unknown. In the roundworm C. elegans, the cilia shafts of amphid channel and phasmid sensory cilia are subdivided into two regions defined by different microtubule ultrastructure: a proximal doublet-based region adjacent to the TZ, and a distal singlet-based region. It has been suggested that C. elegans cilia also possess an InvC, similarly to mammalian primary cilia. Here we explored the biogenesis, structure, and composition of the C. elegans ciliary doublet region and InvC. We show that the InvC is conserved and distinct from the doublet region. nphp-2 (the C. elegans Inversin homolog) and the doublet region genes arl-13 , klp-11, and unc-119 are redundantly required for ciliogenesis. InvC and doublet region genes can be sorted into two modules— nphp-2 + klp-11 and arl-13 + unc-119— which are both antagonized by the hdac-6 deacetylase. The genes of this network modulate the sizes of the NPHP-2 InvC and ARL-13 doublet region. Glutamylation, a tubulin post-translational modification, is not required for ciliary targeting of InvC and doublet region components; rather, glutamylation is modulated by nphp-2 , arl-13 , and unc-119 . The ciliary targeting and restricted localization of NPHP-2, ARL-13, and UNC-119 does not require TZ-, doublet region, and InvC-associated genes. NPHP-2 does require its calcium binding EF hand domain for targeting to the InvC. We conclude that the C. elegans InvC is distinct from the doublet region, and that components in these two regions interact to regulate ciliogenesis via cilia placement, ciliary microtubule ultrastructure, and protein localization.
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  • 77
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    Public Library of Science (PLoS)
    In: PLoS ONE
    Publication Date: 2014-12-12
    Description: by Federico Donà, Jonathan Houseley Ribonuclease A (RNase A) is widely used in molecular biology research both for analytical assays and for nucleic acid preparation. The catalytic mechanism of RNase A is well understood and absolutely precludes activity on DNA; however anecdotal reports of DNA degradation by RNase A are not uncommon. Here we describe a mechanism by which RNase A treatment can lead to apparent DNA degradation. This results from the surprising finding that RNase A remains functional in a phenol:chloroform mixture, to our knowledge the only enzyme that survives this highly denaturing solvent environment. Although RNase A does not cleave the DNA backbone it is capable of binding to DNA, forming stable RNase A-DNA complexes that partition to the interphase or organic phase during phenol:chloroform purification. The unexpected survival of the RNase A DNA-binding activity in phenol means that these complexes are not dissolved and a substantial amount of RNase A-bound DNA is permanently removed from the aqueous phase and lost on phase separation. This effect will impact DNA recovery from multiple procedures and is likely to represent a source of sequence bias in genome-wide studies. Our results also indicate that the results of analytical studies performed using RNase A must be considered with care.
    Electronic ISSN: 1932-6203
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  • 78
    Publication Date: 2014-12-12
    Description: by Pierre Soubeyran, Carine Bellera, Jean Goyard, Damien Heitz, Hervé Curé, Hubert Rousselot, Gilles Albrand, Véronique Servent, Olivier Saint Jean, Isabelle van Praagh, Jean-Emmanuel Kurtz, Stéphane Périn, Jean-Luc Verhaeghe, Catherine Terret, Christophe Desauw, Véronique Girre, Cécile Mertens, Simone Mathoulin-Pélissier, Muriel Rainfray Background Geriatric Assessment is an appropriate method for identifying older cancer patients at risk of life-threatening events during therapy. Yet, it is underused in practice, mainly because it is time- and resource-consuming. This study aims to identify the best screening tool to identify older cancer patients requiring geriatric assessment by comparing the performance of two short assessment tools the G8 and the Vulnerable Elders Survey (VES-13). Patients and Methods The diagnostic accuracy of the G8 and the (VES-13) were evaluated in a prospective cohort study of 1674 cancer patients accrued before treatment in 23 health care facilities. 1435 were eligible and evaluable. Outcome measures were multidimensional geriatric assessment (MGA), sensitivity (primary), specificity, negative and positive predictive values and likelihood ratios of the G8 and VES-13, and predictive factors of 1-year survival rate. Results Patient median age was 78.2 years (70-98) with a majority of females (69.8%), various types of cancer including 53.9% breast, and 75.8% Performance Status 0-1. Impaired MGA, G8, and VES-13 were 80.2%, 68.4%, and 60.2%, respectively. Mean time to complete G8 or VES-13 was about five minutes. Reproducibility of the two questionnaires was good. G8 appeared more sensitive (76.5% versus 68.7%, P  =  0.0046) whereas VES-13 was more specific (74.3% versus 64.4%, P
    Electronic ISSN: 1932-6203
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  • 79
    Publication Date: 2014-12-12
    Description: by Laurence Lacroix, Sergio Manzano, Lynda Vandertuin, Florence Hugon, Annick Galetto-Lacour, Alain Gervaix Background The Lab-score, based on the combined determination of procalcitonin, C-reactive protein and urinary dipstick results, has been shown accurate in detecting serious bacterial infections (SBI) in children with fever without source (FWS) on retrospective cohorts. We aimed to prospectively assess the utility of the Lab-score in safely decreasing antibiotic prescriptions in children with FWS and to determine its diagnostic characteristics compared to common SBI biomarkers. Methods Randomized controlled trial in children 7 days to 36 months old with FWS, allocated either to the Lab-score group (Lab-score reported, blinded WBC count) or to the control group (WBC, bands and C-reactive protein determined, blinded procalcitonin and Lab-score), followed up until recovery. Demographic data, antibiotic prescription rate, admission rate and diagnostic properties of the Lab-score were analyzed. Results 271 children were analyzed. No statistically significant difference concerning antibiotic prescription rate was observed: 41.2% (54 of 131) in the Lab-score group and 42.1% (59 of 140) in the control group (p = 1.000). If recommendations based on the Lab-score had been strictly applied, a hypothetical 30.6% treatment rate would have been encountered, compared to the overall 41.7% observed rate (p = 0.0095). A Lab-score ≥3 showed the following characteristics: sensitivity 85.1% (95% CI: 76.5–93.6%), specificity 87.3% (95% CI: 82.7–91.8%), positive predictive value 68.7% (95% CI: 58.7–78.7%), negative predictive value 94.1% (95% CI: 91.5–97.9%), positive and negative likelihood ratios: 6.68 and 0.17 respectively. Area under the receiver operating characteristic curve was best for the Lab-score (0.911, 95% CI: 0.871–0.950). Discussion No difference regarding antibiotic treatment rate was observed when using the Lab-score, due to lack of adherence to the related recommendations. However, if strictly followed, a significant 26.5% reduction of antibiotic prescriptions would have been encountered. Medical education needs to be reinforced in order to observe rather than treat low-risk well-appearing children with FWS. Trial Registration ClinicalTrials.gov NCT02179398
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  • 80
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    Public Library of Science (PLoS)
    In: PLoS ONE
    Publication Date: 2014-12-12
    Description: by Simon Bate, Natasha A. Karp Methods for choosing an appropriate sample size in animal experiments have received much attention in the statistical and biological literature. Due to ethical constraints the number of animals used is always reduced where possible. However, as the number of animals decreases so the risk of obtaining inconclusive results increases. By using a more efficient experimental design we can, for a given number of animals, reduce this risk. In this paper two popular cases are considered, where planned comparisons are made to compare treatments back to control and when researchers plan to make all pairwise comparisons. By using theoretical and empirical techniques we show that for studies where all pairwise comparisons are made the traditional balanced design, as suggested in the literature, maximises sensitivity. For studies that involve planned comparisons of the treatment groups back to the control group, which are inherently more sensitive due to the reduced multiple testing burden, the sensitivity is maximised by increasing the number of animals in the control group while decreasing the number in the treated groups.
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  • 81
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    In: PLoS ONE
    Publication Date: 2014-12-12
    Description: by Jinseok Kim, Jin-Won Noh, Jumin Park, Young Dae Kwon Background There are conflicting results about the association between body mass index (BMI) and depressive symptoms in older adults. The present study examined the relationship between weight and depressive symptoms over time in older adults in South Korea. Methods We used data from three waves of the Korean Longitudinal Study of Aging and ran a series of cross-lagged panel models to test the reciprocal relationship between depressive symptoms and obesity in older Korean adults. We assumed a temporally stable relationship between depressive symptoms and obesity and, thus imposed equality constraints over time. Results After controlling for the effect of depressive symptoms two years prior, underweight older adults had a higher depressive symptom score than those of normal weight. When controlling for obesity status from two years prior, older adults with higher levels of depressive symptoms were more likely to be underweight and less likely to be overweight than normal weight. The same patterns were observed in data from 2006 to 2008 and from 2008 to 2010. Conclusions These results show that there is a correlation between depressive symptoms and weight status. In middle-aged and elderly Asian populations, depression can lead to weight loss rather than obesity, and underweight may develop depressive symptoms.
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  • 82
    Publication Date: 2014-12-12
    Description: by Brett Howland, Dejan Stojanovic, Iain J. Gordon, Adrian D. Manning, Don Fletcher, David B. Lindenmayer Large mammalian grazers can alter the biotic and abiotic features of their environment through their impacts on vegetation. Grazing at moderate intensity has been recommended for biodiversity conservation. Few studies, however, have empirically tested the benefits of moderate grazing intensity in systems dominated by native grazers. Here we investigated the relationship between (1) density of native eastern grey kangaroos, Macropus giganteus , and grass structure, and (2) grass structure and reptiles (i.e. abundance, richness, diversity and occurrence) across 18 grassland and grassy Eucalyptus woodland properties in south-eastern Australia. There was a strong negative relationship between kangaroo density and grass structure after controlling for tree canopy cover. We therefore used grass structure as a surrogate for grazing intensity. Changes in grazing intensity (i.e. grass structure) significantly affected reptile abundance, reptile species richness, reptile species diversity, and the occurrence of several ground-dwelling reptiles. Reptile abundance, species richness and diversity were highest where grazing intensity was low. Importantly, no species of reptile was more likely to occur at high grazing intensities. Legless lizards ( Delma impar , D. inornata ) were more likely to be detected in areas subject to moderate grazing intensity, whereas one species ( Hemiergis talbingoensis ) was less likely to be detected in areas subject to intense grazing and three species ( Menetia greyii , Morethia boulengeri , and Lampropholis delicata ) did not appear to be affected by grazing intensity. Our data indicate that to maximize reptile abundance, species richness, species diversity, and occurrence of several individual species of reptile, managers will need to subject different areas of the landscape to moderate and low grazing intensities and limit the occurrence and extent of high grazing.
    Electronic ISSN: 1932-6203
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  • 83
    Publication Date: 2014-12-12
    Description: by David M. Baron, Ulrike Kaindl, Verena J. Haudek-Prinz, Editha Bayer, Clemens Röhrl, Christopher Gerner, Brigitte Marian Colorectal cancer is a leading cause of mortality worldwide. Resistance to therapy is common and often results in patients succumbing to the disease. The mechanisms of resistance are poorly understood. Cells basically have two possibilities to survive a treatment with potentially apoptosis-inducing substances. They can make use of their existing proteins to counteract the induced reactions or quickly upregulate protective factors to evade the apoptotic signal. To identify protein patterns involved in resistance to apoptosis, we studied two colorectal adenocarcinoma cell lines with different growth responses to low-molar concentrations of the thiazolidinedione Ciglitazone: HT29 cells underwent apoptosis, whereas SW480 cells increased cell number. Fluorescence detection and autoradiography scans of 2D-PAGE gels were performed in both cell lines to assess protein synthesis and turnover, respectively. To verify the data we performed shotgun analysis using the same treatment procedure as in 2D-experiments. Biological functions of the identified proteins were mainly associated with apoptosis regulation, chaperoning, intrinsic inflammation, and DNA repair. The present study suggests that different growth response of two colorectal carcinoma cell lines after treatment with Ciglitazone results from cell-specific protein synthesis and differences in protein regulation.
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  • 84
    Publication Date: 2014-12-12
    Description: by The PLOS ONE Staff
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  • 85
    Publication Date: 2014-12-12
    Description: by Danica F. Patton, Ângela M. Katsuyama, Ilya Pavlovski, Mateusz Michalik, Zachary Patterson, Maksim Parfyonov, Andrea N. Smit, Elliott G. Marchant, John Chung, Alfonso Abizaid, Kai-Florian Storch, Horacio de la Iglesia, Ralph E. Mistlberger Circadian clocks in many brain regions and peripheral tissues are entrained by the daily rhythm of food intake. Clocks in one or more of these locations generate a daily rhythm of locomotor activity that anticipates a regular mealtime. Rats and mice can also anticipate two daily meals. Whether this involves 1 or 2 circadian clocks is unknown. To gain insight into how the circadian system adjusts to 2 daily mealtimes, male rats in a 12∶12 light-dark cycle were fed a 2 h meal either 4 h after lights-on or 4 h after lights-off, or a 1 h meal at both times. After 30 days, brain, blood, adrenal and stomach tissue were collected at 6 time points. Multiple clock genes from adrenals and stomachs were assayed by RT-PCR. Blood was assayed for corticosterone and ghrelin. Bmal1 expression was quantified in 14 brain regions by in situ hybridization. Clock gene rhythms in adrenal and stomach from day-fed rats oscillated in antiphase with the rhythms in night-fed rats, and at an intermediate phase in rats fed twice daily. Corticosterone and ghrelin in 1-meal rats peaked at or prior to the expected mealtime. In 2-meal rats, corticosterone peaked only prior the nighttime meal, while ghrelin peaked prior to the daytime meal and then remained elevated. The olfactory bulb, nucleus accumbens, dorsal striatum, cerebellum and arcuate nucleus exhibited significant daily rhythms of Bmal1 in the night-fed groups that were approximately in antiphase in the day-fed groups, and at intermediate levels (arrhythmic) in rats anticipating 2 daily meals. The dissociations between anticipatory activity and the peripheral clocks and hormones in rats anticipating 2 daily meals argue against a role for these signals in the timing of behavioral rhythms. The absence of rhythmicity at the tissue level in brain regions from rats anticipating 2 daily meals support behavioral evidence that circadian clock cells in these tissues may reorganize into two populations coupled to different meals.
    Electronic ISSN: 1932-6203
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  • 86
    Publication Date: 2014-12-12
    Description: by Shradha Wali, Rishein Gupta, Ronald L. Veselenak, Yansong Li, Jieh-Juen Yu, Ashlesh K. Murthy, Andrew P. Cap, M. Neal Guentzel, James P. Chambers, Guangming Zhong, Roger G. Rank, Richard B. Pyles, Bernard P. Arulanandam Guinea pigs have been used as a second animal model to validate putative anti-chlamydial vaccine candidates tested in mice. However, the lack of guinea pig-specific reagents has limited the utility of this animal model in Chlamydia sp . vaccine studies. Using a novel guinea pig-specific transcriptome array, we determined correlates of protection in guinea pigs vaccinated with Chlamydia caviae ( C. caviae ) via the intranasal route, previously reported by us and others to provide robust antigen specific immunity against subsequent intravaginal challenge. C. caviae vaccinated guinea pigs resolved genital infection by day 3 post challenge. In contrast, mock vaccinated animals continued to shed viable Chlamydia up to day 18 post challenge. Importantly, at day 80 post challenge, vaccinated guinea pigs experienced significantly reduced genital pathology - a sequelae of genital chlamydial infections, in comparison to mock vaccinated guinea pigs. Sera from vaccinated guinea pigs displayed antigen specific IgG responses and increased IgG1 and IgG2 titers capable of neutralizing GPIC in vitro . Th1-cellular/inflammatory immune genes and Th2-humoral associated genes were also found to be elevated in vaccinated guinea pigs at day 3 post-challenge and correlated with early clearance of the bacterium. Overall, this study provides the first evidence of guinea pig-specific genes involved in anti-chlamydial vaccination and illustrates the enhancement of the utility of this animal model in chlamydial pathogenesis.
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  • 87
    Publication Date: 2014-12-13
    Description: by The PLOS Genetics Staff
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  • 88
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    In: PLoS ONE
    Publication Date: 2014-12-13
    Description: by Thoi Cong Truong, Van Thai Than, Wonyong Kim Viral gastroenteritis is the most common causal agent of public health problems worldwide. Noroviruses cause nonbacterial acute gastroenteritis in humans of all ages. In this study, we investigated the occurrence of norovirus infection in children with acute gastroenteritis admitted to university hospitals in South Korea. We also analyzed the genetic diversity of the viruses and identified novel recombination events among the identified viral strains. Of 502 children with acute gastroenteritis admitted to our three hospitals between January 2011 and March 2012, genotyping of human noroviruses was performed in 171 (34%) norovirus-positive samples. Of these samples, 170 (99.5%) were in genogroup II (GII), while only one (0.5%) was in genogroup I (GI). The most common GII strain was the GII.4-2006b variant (n = 96, 56.5%), followed by GII.6 (n = 23, 13.5%), GII.12 (n = 22, 12.9%), GII.3 (n = 20, 11.8%), GII.2 (n = 6, 3.5%), GII.b (n = 2, 1.2%), and GII.10 (n = 1, 0.6%). Potential recombination events (polymerase/capsid) were detected in 39 GII strains (22.9%), and the most frequent genotypes were GII.4/GII.12 (n = 12, 30.8%), GII.4/GII.6 (n = 12, 30.8%), GII.4/GII.3 (n = 8, 20.5%), GII.b/GII.3 (n = 3, 7.7%), GII.16/GII.2 (n = 2, 5.1%), GII.4/GII.2 (n = 1, 2.6%), and GII.2/GII.10 (n = 1, 2.6%). For the first time, a novel GII.2/GII.10 recombination was detected; we also identified the GII.16/GII.2 strain for the first time in South Korea. Our data provided important insights into new recombination events, which may prove valuable for predicting the emergence of circulating norovirus strains with global epidemic potential.
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  • 89
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    In: PLoS ONE
    Publication Date: 2014-12-13
    Description: by Laura R. Geuss, Douglas C. Wu, Divya Ramamoorthy, Corinne D. Alford, Laura J. Suggs Mechanical forces play an important role in proper embryologic development, and similarly such forces can directly impact pluripotency and differentiation of mouse embryonic stem cells (mESC) in vitro . In addition, manipulation of the embryoid body (EB) microenvironment, such as by incorporation of microspheres or microparticles, can similarly influence fate determination. In this study, we developed a mechanical stimulation regimen using permanent neodymium magnets to magnetically attract cells within an EB. Arginine-Glycine-Aspartic Acid (RGD)-conjugated paramagnetic beads were incorporated into the interior of the EBs during aggregation, allowing us to exert force on individual cells using short-term magnetization. EBs were stimulated for one hour at different magnetic field strengths, subsequently exerting a range of force intensity on the cells at different stages of early EB development. Our results demonstrated that following exposure to a 0.2 Tesla magnetic field, ESCs respond to magnetically mediated strain by activating Protein Kinase A (PKA) and increasing phosphorylated extracellular signal-regulated kinase 1/2 (pERK1/2) expression. The timing of stimulation can also be tailored to guide ESC differentiation: the combination of bone morphogenetic protein 4 (BMP4) supplementation with one hour of magnetic attraction on Day 3 enhances cardiomyogenesis by increasing contractile activity and the percentage of sarcomeric α-actin-expressing cells compared to control samples with BMP4 alone. Interestingly, we also observed that the beads alone had some impact on differentiation by increasingly slightly, albeit not significantly, the percentage of cardiomyocytes. Together these results suggest that magnetically mediated strain can be used to enhance the percentage of mouse ESC-derived cardiomyocytes over current differentiation protocols.
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  • 90
    Publication Date: 2014-12-13
    Description: by Yabing Cao, Guangli Xiao, Xibin Qiu, Sheng Ye, Tongyu Lin Introduction We report the efficacy and safety of crizotinib treatment among Chinese patients with advanced-stage NSCLC. Methods We retrospectively analyzed patients with EML4-ALK positive advanced NSCLC who were treated with crizotinib from May 2012 to Aug 2013. Baseline clinical parameters, treatment protocol, response to therapy and survival were noted. The primary goal was to evaluate the efficacy of crizotinib in patients who were previously treated patients or who had poor ECOG performance status (PS). Results Forty patients were evaluable for safety and efficacy. Median age was 43 years, 100% had adenocarcinoma and stage IV disease, and 42.5% were female. Six patients received frontline treatment with crizotinib, 17 patients had 1 prior treatment, and 17 patients had more than 2 lines of prior treatment. Patients received a median of 5 cycles of treatment (range 1–15 cycles). After the first cycle, 92.5% (37/40) patients archived partial remission (PR). At the end of the follow-up period, the overall PR rate was 70% (28/40), and progression of disease (PD) occurred in 30% of patients (12/40). The median PFS was 28 weeks (95% CI 15.4 to 40.5 weeks), and median OS was 40 weeks (95% CI 38.6 to 49.3 weeks). The most frequent treatment-related AEs were vomiting (47.5%), vision disorder (27.5%) and increased ALT/AST (42%); most toxicities were Grade 1/2. Observed treatment-related Grade 3/4 AEs included increased ALT/AST (10%) and vomiting (5%). The EML4-ALK fusion rate and number of prior chemotherapy cycles did not appear to significantly affect the efficacy of crizotinib. However, PS 0–2 patients had improved PFS (50 weeks vs. 24 weeks, p = 0.015). Conclusions Crizotinib was safe, well-tolerated, and effective in Chinese patients with pre-treated ALK-rearranged NSCLC. QOL was improved and PS appears to have an effect on the efficacy of crizotinib, but prior treatment and ALK fusion rate do not.
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  • 91
    Publication Date: 2014-12-13
    Description: by Cécile Feuillie, Maxime M. Merheb, Benjamin Gillet, Gilles Montagnac, Isabelle Daniel, Catherine Hänni The analysis of ancient or processed DNA samples is often a great challenge, because traditional Polymerase Chain Reaction – based amplification is impeded by DNA damage. Blocking lesions such as abasic sites are known to block the bypass of DNA polymerases, thus stopping primer elongation. In the present work, we applied the SERRS-hybridization assay, a fully non-enzymatic method, to the detection of DNA refractory to PCR amplification. This method combines specific hybridization with detection by Surface Enhanced Resonant Raman Scattering (SERRS). It allows the detection of a series of double-stranded DNA molecules containing a varying number of abasic sites on both strands, when PCR failed to detect the most degraded sequences. Our SERRS approach can quickly detect DNA molecules without any need for DNA repair. This assay could be applied as a pre-requisite analysis prior to enzymatic reparation or amplification. A whole new set of samples, both forensic and archaeological, could then deliver information that was not yet available due to a high degree of DNA damage.
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  • 92
    Publication Date: 2014-12-13
    Description: by Navdeep Grewal, Gail M. Thornton, Hayedeh Behzad, Aishwariya Sharma, Alex Lu, Peng Zhang, W. Darlene Reid, David J. Granville, Alex Scott Objective Clinical studies have suggested an association between dyslipidemia and tendon injuries or chronic tendon pain; the mechanisms underlying this association are not yet known. The objectives of this study were (1) to evaluate the impact of a high fat diet on the function of load-bearing tendons and on the distribution in tendons of oxidized low density lipoprotein (oxLDL), and (2) to examine the effect of oxLDL on tendon fibroblast proliferation and gene expression. Methods Gene expression ( Mmp2, Tgfb1 , Col1a1 , Col3a1 ), fat content (Oil Red O staining), oxLDL levels (immunohistochemistry) and tendon biomechanical properties were examined in mice (C57Bl/6 or ApoE -/-) receiving a standard or a high fat diet. Human tendon fibroblast proliferation and gene expression ( COL1A1 , COL3A1 , MMP2 ) were examined following oxLDL exposure. Results In both types of mice (C57Bl/6 or ApoE -/-), consumption of a high fat diet led to a marked increase in oxLDL deposition in the load-bearing extracellular matrix of the tendon. The consumption of a high fat diet also reduced the failure stress and load of the patellar tendon in both mouse types, and increased Mmp2 expression. ApoE -/- mice exhibited more pronounced reductions in tendon function than wild-type mice, and decreased expression of Col1a1 compared to wild type mice. Human tendon fibroblasts responded to oxLDL by increasing their proliferation and their mRNA levels of MMP2 , while decreasing their mRNA levels for COL1A1 and COL3A1 . Conclusion The consumption of a high fat diet resulted in deleterious changes in tendon function, and these changes may be explained in part by the effects of oxLDL, which induced a proliferative, matrix-degrading phenotype in human tenocytes.
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  • 93
    Publication Date: 2014-12-13
    Description: by Valentina Grande, Giusi Manassero, Alessandro Vercelli Excitotoxic damage represents the major mechanism leading to cell death in many human neurodegenerative diseases such as ischemia, trauma and epilepsy. Caused by an excess of glutamate that acts on metabotropic and ionotropic excitatory receptors, excitotoxicity activates several death signaling pathways leading to an extensive neuronal loss and a consequent strong activation of astrogliosis. Currently, the search for a neuroprotective strategy is aimed to identify the level in the signaling pathways to block excitotoxicity avoiding the loss of important physiological functions and side effects. To this aim, PTEN can be considered an ideal candidate: downstream the excitatory receptors activated in excitotoxicity (whose inhibition was shown to be not clinically viable), it is involved in neuronal damage and in the first stage of the reactive astrogliosis in vivo . In this study, we demonstrated the involvement of PTEN in excitotoxicity through its pharmacological inhibition by dipotassium bisperoxo (picolinato) oxovanadate [bpv(pic)] in a model of temporal lobe epilepsy, obtained by intraperitoneal injection of kainate in 2-month-old C57BL/6J male mice. We have demonstrated that inhibition of PTEN by bpv(pic) rescues neuronal death and decreases the reactive astrogliosis in the CA3 area of the hippocampus caused by systemic administration of kainate. Moreover, the neurotoxin administration increases significantly the scanty presence of mitochondrial PTEN that is significantly decreased by the administration of the inhibitor 6 hr after the injection of kainate, suggesting a role of PTEN in mitochondrial apoptosis. Taken together, our results confirm the key role played by PTEN in the excitotoxic damage and the strong anti-inflammatory and neuroprotective potential of its inhibition.
    Electronic ISSN: 1932-6203
    Topics: Medicine , Natural Sciences in General
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  • 94
    Publication Date: 2014-12-13
    Description: by Stephen J. Genuis, Yanna Liu, Quentin I. T. Genuis, Jonathan W. Martin Background Perfluoroalkyl acids (PFAAs) are a family of commonly used synthetic chemicals that have become widespread environmental contaminants. In human serum, perfluorohexane sulfonate (PFHxS), perflurooctane sulfonate (PFOS), and perfluorooctanoate (PFOA) are most frequently detected, in part owing to their long elimination half-lives of between 3.8 yrs (PFOA) and 8.5 yrs (PFHxS). These PFAAs also cross the placenta and have been associated with developmental toxicity, and some are considered likely human carcinogens. Interventions to eliminate PFAAs in highly contaminated individuals would reduce future health risks, but minimal research has been conducted on methods to facilitate accelerated human clearance of these persistent substances. Methods Six patients with elevated serum concentrations from a single family were treated by intermittent phlebotomy over a 4–5 year period at intervals similar to, or less frequent than what is done for routine blood donation at Canadian Blood Services. The apparent elimination half-life (HL app ) for PFHxS, PFOS, and PFOA in this treated population was calculated in each patient and compared to the intrinsic elimination half-lives (HL in ) from a literature reference population of untreated fluorochemical manufacturing plant retirees (n = 26, age 〉55 yrs). Results For all three PFAAs monitored during phlebotomy, HL app in each of the family members (except the mother, who had a low rate of venesection) was significantly shorter than the geometric mean HL measured in the reference population, and in some cases were even shorter compared to the fastest eliminator in the reference population. Conclusion This study suggests significantly accelerated PFAA clearance with regular phlebotomy treatment, but the small sample size and the lack of controls in this clinical intervention precludes drawing firm conclusions. Given the minimal risks of intermittent phlebotomy, this may be an effective and safe clinical intervention to diminish the body burden of PFAAs in highly exposed people.
    Electronic ISSN: 1932-6203
    Topics: Medicine , Natural Sciences in General
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  • 95
    Publication Date: 2014-12-13
    Description: by Karin Janssen van Doorn, Walter Verbrugghe, Kristien Wouters, Hilde Jansens, Philippe G. Jorens Background Exploration of the impact of severe hypotension on the evolution of acute kidney injury in septic patients. Methods and Results We reviewed the hemodynamic parameters of 137 adults with septic shock and proven blood stream infection in the ICU. Severe hypotension was defined as a mean arterial blood pressure (MAP) ≤65 mmHg. The influence of the duration of severe hypotension on the evolution of acute kidney injury was evaluated according to the RIFLE classification, with day 0 defined as the day of a positive blood stream infection. After bloodstream infection, the probability for a patient to be in Failure was significantly higher than before blood stream infection (OR = 1.94, p = 0.0276). Patients have a significantly higher risk of evolving to Failure if the duration of severe hypotension is longer (OR = 1.02 for each 10 minutes increase in duration of a MAP
    Electronic ISSN: 1932-6203
    Topics: Medicine , Natural Sciences in General
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  • 96
    Publication Date: 2014-12-15
    Description: Metal-on-metal hip resurfacing (MOM-HR) is offered as an alternative to traditional hip arthroplasty for young, active adults with advanced osteoarthritis. Nevertheless, concerns remain regarding wear and corrosion of the bearing surfaces and the resulting increase in metal ion levels. We evaluated three cohorts of patients with Birmingham hip resurfacing (BHR) at an average follow-up of 2, 5, and 9 years. We asked whether there would be differences in ion levels between the cohorts and inside the gender. Nineteen patients were prospectively analyzed. The correlation with clinical-radiographic data was also performed. Chromium, cobalt, nickel, and molybdenum concentrations were measured by atomic absorption spectrophotometry. Chromium and cobalt levels demonstrated a tendency to decrease over time. Such tendency was present only in females. An inverse correlation between chromium, implant size, and Harris hip score was present at short term; it disappeared over time together with the decreased ion levels. The prospective analysis showed that, although metal ion levels remained fairly constant within each patient, there was a relatively large variation between subjects, so mean data in this scenario must be interpreted with caution. The chronic high exposure should be carefully considered during implant selection, particularly in young subjects, and a stricter monitoring is mandatory.
    Electronic ISSN: 1537-744X
    Topics: Natural Sciences in General
    Published by Hindawi
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  • 97
    Publication Date: 2014-12-16
    Description: Adsorption of strong polyelectrolyte, poly(styrenesulfonate), PSS, of different molecular weights onto large α-Al2O3 beads was systematically investigated as functions of pH and NaCl concentrations. The ultraviolet (UV) absorption spectra of PSS at different pH and salt concentrations confirmed that the structure of PSS is independent of pH. With the change of molecular weight from 70 kg/mol (PSS 70) to 1000 kg/mol (PSS 1000), adsorption amount of PSS increases and proton coadsorption on the surface of α-Al2O3 decreases at given pH and salt concentration. It suggests that higher molecular weight of PSS was less flat conformation than lower one. The adsorption density of PSS 70 and PSS 1000 decreases with decreasing salt concentrations, indicating that both electrostatic and nonelectrostatic interactions are involved. Experimental results of both PSS 70 and PSS 1000 adsorption isotherms onto α-Al2O3 at different pH and salt concentrations can be represented well by two-step adsorption model. The effects of molecular weight and salt concentration are explained by structure of adsorbed PSS onto α-Al2O3. The influence of added SDS on the isotherms is evaluated from the sequential adsorption. The SDS uptake onto α-Al2O3 in the presence of hemimicelles can prevent the adsorption of PSS at low concentration so that adsorption of PSS reduces with preadsorbed SDS.
    Print ISSN: 1687-7985
    Electronic ISSN: 1687-7993
    Topics: Chemistry and Pharmacology , Physics
    Published by Hindawi
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  • 98
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    Hindawi
    Publication Date: 2014-12-15
    Description: We construct a massive theory of gravity that is invariant under conformal transformations. The massive action of the theory depends on the metric tensor and a scalar field, which are considered the only field variables. We find the vacuum field equations of the theory and analyze its weak-field approximation and Newtonian limit.
    Print ISSN: 1687-7357
    Electronic ISSN: 1687-7365
    Topics: Physics
    Published by Hindawi
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  • 99
    Publication Date: 2014-12-16
    Description: by The PLOS ONE Staff
    Electronic ISSN: 1932-6203
    Topics: Medicine , Natural Sciences in General
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  • 100
    Publication Date: 2014-12-16
    Description: by The PLOS ONE Staff
    Electronic ISSN: 1932-6203
    Topics: Medicine , Natural Sciences in General
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