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  • Wiley  (181,902)
  • MDPI  (56,387)
  • American Association for the Advancement of Science
  • American Geophysical Union
  • 2015-2019  (305,519)
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  • 1
    Publication Date: 2021-03-09
    Description: Mixed‐mode fluid‐filled cracks represent a common means of fluid transport within the Earth's crust. They often show complex propagation paths which may be due to interaction with crustal heterogeneities or heterogeneous crustal stress. Previous experimental and numerical studies focus on the interplay between fluid over-pressure and external stress but neglect the effect of other crack parameters. In this study, we address the role of crack length on the propagation paths in the presence of an external heterogeneous stress field. We make use of numerical simulations of magmatic dike and hydrofracture propagation, carried out using a two‐dimensional boundary element model, and analogue experiments of air‐filled crack propagation into a transparent gelatin block. We use a 3‐D finite element model to compute the stress field acting within the gelatin block and perform a quantitative comparison between 2‐D numerical simulations and experiments. We show that, given the same ratio between external stress and fluid pressure, longer fluid‐filled cracks are less sensitive to the background stress, and we quantify this effect on fluid‐filled crack paths. Combining the magnitude of the external stress, the fluid pressure, and the crack length, we define a new parameter, which characterizes two end member scenarios for the propagation path of a fluid‐filled fracture. Our results have important implications for volcanological studies which aim to address the problem of complex trajectories of magmatic dikes (i.e., to forecast scenarios of new vents opening at volcanoes) but also have implications for studies that address the growth and propagation of natural and induced hydrofractures.
    Description: Published
    Description: 2064–2081
    Description: 2V. Struttura e sistema di alimentazione dei vulcani
    Description: JCR Journal
    Keywords: Magmatic dykes ; hydrofractures ; Numerical symulations ; Analogue experiments ; 04.08. Volcanology ; 05.05. Mathematical geophysics
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: article
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  • 2
    Publication Date: 2021-01-25
    Description: Tsunami deposits present an important archive for understanding tsunami histories and dynamics. Most research in this field has focused on onshore preserved remains, while the offshore deposits have received less attention. In 2009, during a coring campaign with theItalian Navy Magnaghi, four 1 m long gravity cores (MG cores) were sampled from the northern part of Augusta Bay, along a transect in 60 to 110 m water depth. These cores were taken in the same area where a core (MS06) was collected in 2007 about 2.3 km offshore Augusta at a water depth of 72 m below sea level. Core MS06 consisted of a 6.7 m long sequence that included 12 anomalous intervals interpreted as the primary effect of tsunami backwash waves in the last 4500 years. In this study, tsunami deposits were identified, based on sedimentology and displaced benthic foraminifera (as for core MS06) reinforced by X-ray fluorescence data. Two erosional surfaces (L1 and L2) were recognized coupled with grain size increase, abundant Posidonia oceanica seagrass remains and a significant amount of Nubecularia lucifuga, an epiphytic sessile benthic foraminifera considered to be transported from the inner shelf. The occurrence of Ti/Ca and Ti/Sr increments, coinciding with peaks in organic matter (Mo inc/coh) suggests terrestrial run-off coupled with an input of organic matter. The L1 and L2 horizons were attributed to two distinct historical tsunamis (AD 1542 and AD 1693) by indirect age-estimation methods using 210Pb profiles and the comparison of Volume Magnetic Susceptibility data between MG cores and MS06 cores. One most recent bioturbated horizon (Bh), despite not matching the above listed interpretative features, recorded an important palaeoenvironmental change that may correspond to the AD 1908 tsunami. These findings reinforce the value of offshore sediment records as an underutilized resource for the identification of past tsunamis.
    Description: Published
    Description: 1553-1576
    Description: 6T. Studi di pericolosità sismica e da maremoto
    Description: JCR Journal
    Keywords: Eastern Sicily ; tsunami ; foraminifera ; sedimentology ; XRF core scanning ; 04.04. Geology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 3
    Publication Date: 2019-12-03
    Description: Phytoplankton in the ocean are extremely diverse. The abundance of various intracellular pigments are often used to study phytoplankton physiology and ecology, and identify and quantify different phytoplankton groups. In this study, phytoplankton absorption spectra (aph(λ)) derived from underway flow-through AC-S measurements in the Fram Strait are combined with phytoplankton pigment measurements analyzed by high-performance liquid chromatography (HPLC) to evaluate the retrieval of various pigment concentrations at high spatial resolution. The performances of two approaches, Gaussian decomposition and the matrix inversion technique are investigated and compared. Our study is the first to apply the matrix inversion technique to underway spectrophotometry data. We find that Gaussian decomposition provides good estimates (median absolute percentage error, MPE 21–34%) of total chlorophyll-a (TChl-a), total chlorophyll-b (TChl-b), the combination of chlorophyll-c1 and -c2 (Chl-c1/2), photoprotective (PPC) and photosynthetic carotenoids (PSC). This method outperformed one of the matrix inversion algorithms, i.e., singular value decomposition combined with non-negative least squares (SVD-NNLS), in retrieving TChl-b, Chl-c1/2, PSC, and PPC. However, SVD-NNLS enables robust retrievals of specific carotenoids (MPE 37–65%), i.e., fucoxanthin, diadinoxanthin and 19′-hexanoyloxyfucoxanthin, which is currently not accomplished by Gaussian decomposition. More robust predictions are obtained using the Gaussian decomposition method when the observed aph(λ) is normalized by the package effect index at 675 nm. The latter is determined as a function of “packaged” aph(675) and TChl-a concentration, which shows potential for improving pigment retrieval accuracy by the combined use of aph(λ) and TChl-a concentration data. To generate robust estimation statistics for the matrix inversion technique, we combine leave-one-out cross-validation with data perturbations. We find that both approaches provide useful information on pigment distributions, and hence, phytoplankton community composition indicators, at a spatial resolution much finer than that can be achieved with discrete samples.
    Repository Name: EPIC Alfred Wegener Institut
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  • 4
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    Wiley
    In:  EPIC3Geophysical Research Letters, Wiley, 46(8), pp. 4288-4298, ISSN: 0094-8276
    Publication Date: 2021-02-16
    Repository Name: EPIC Alfred Wegener Institut
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  • 5
    Publication Date: 2019-04-29
    Description: Sedimentary architecture and morphogenetic evolution of a polar bay-mouth gravel-spit system are revealed based on topographic mapping, sedimentological data, radiocarbon dating and ground-penetrating radar investigations. Data document variable rates of spit progradation in reaction to atmospheric warming synchronous to the termination of the last glacial re-advance (LGR, 0.45–0.25 ka BP), the southern hemisphere equivalent of the Little Ice Age cooling period. Results show an interruption of spit progradation that coincides with the proposed onset of accelerated isostatic rebound in reaction to glacier retreat. Spit growth resumed in the late 19th century after the rate of isostatic rebound decreased, and continues until today. The direction of modern spit progradation, however, is rotated northwards compared with the growth axis of the early post-LGR spit. This is interpreted to reflect the shift and strengthening in the regional wind field during the last century. A new concept for the interplay of polar gravel-spit progradation and glacio-isostatic adjustment is presented, allowing for the prediction of future coastal evolution in comparable polar settings.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev , info:eu-repo/semantics/article
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  • 6
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    Wiley
    In:  EPIC3Geophysical Research Letters, Wiley, 46, ISSN: 0094-8276
    Publication Date: 2019-07-10
    Description: Here we evaluate five atmospheric reanalyses in an Arctic gateway during late summer. The reanalyses include ERA5, ERA-Interim, JRA-55, CFSv2 and MERRA-2. We use observations from 50 radiosondes launched in the Fram Strait around 79-80˚N, between 25 August – 11 September 2017. Crucially, data from 27 radiosondes were not transmitted to the Global Telecommunications System (GTS), and therefore not assimilated into any reanalysis. In most reanalyses, the magnitude of wind speed and humidity errors are similar for profiles with and without data assimilation. In cases without data assimilation, correlation coefficients (R) exceed 0.88 for temperature, wind speed and specific humidity, in all reanalyses. Overall, the newly released ERA5 has higher correlation coefficients than any other reanalyses as well as smaller biases and root mean square errors, for all three variables. The largest improvements identified in ERA5 are in its representation of the wind field, and temperature profiles over warm water.
    Repository Name: EPIC Alfred Wegener Institut
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  • 7
    Publication Date: 2019-08-13
    Description: The importance of macrobenthos in benthic‐pelagic coupling and early diagenesis of organic carbon (OC) has long been recognized but has not been quantified at a regional scale. By using the southern North Sea as an exemplary area we present a modelling attempt to quantify the budget of total organic carbon (TOC) reworked by macrobenthos in seafloor surface sediments. Vertical profiles in sediments collected in the field indicate a significant but nonlinear correlation between TOC and macrobenthic biomass. A mechanistic model is used to resolve the bi‐directional interaction between TOC and macrobenthos. A novelty of this model is that bioturbation is resolved dynamically depending on variations in local food resource and macrobenthic biomass. The model is coupled to 3D hydrodynamic‐biogeochemical simulations to hindcast the mutual dependence between sedimentary TOC and macrobenthos from 1948 to 2015. Agreement with field data reveals a satisfactory model performance. Our simulations show that the preservation of TOC in the North Sea sediments is not only determined by pelagic conditions (hydrodynamic regime and primary production) but also by the vertical distribution of TOC, bioturbation intensity, and the vertical positioning of macrobenthos. Macrobenthos annually ingest 20%–35% and in addition vertically diffuse 11%–22% of the total budget of TOC in the upper‐most 30 cm sediments in the southern North Sea. This result indicates a central role of benthic animals in modulating the OC cycling at the sediment‐water interface of continental margins.
    Repository Name: EPIC Alfred Wegener Institut
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  • 8
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    Wiley
    In:  EPIC3Paleoceanography and Paleoclimatology, Wiley, 34, pp. 432-435
    Publication Date: 2019-06-23
    Description: Age control and paleoceanographic evidence of marine sediment records might be challenged if authors solely build their stratigraphy on visual correlation to apparently well‐dated records from the same ocean basin, using, for example, highly resolved X‐ray fluorescence‐based element‐count records and correlation tools such as AnalySeries. While per se perfectly reasonable, this approach bears the risk of missing stratigraphic gaps in the sedimentary record and thus might result in imprecise and/or flawed interpretations. Here we present a unique series of 14 planktic 14C ages from a 7‐cm section of East Pacific Rise core PS75/059‐2. The ages suggest a 14‐ky‐long period of low‐to‐zero deposition during Last Glacial Maximum, mainly marked by continuous redistribution of winnowed foraminifers, probably the result of enhanced bottom currents, moreover, by some bioturbational mixing. On the basis of this data we demonstrate the impact of the hiatus on a South Pacific transect of apparent benthic ventilation ages (ΔΔ14C values) and their meaning for estimates of CO2 stored in Last Glacial Maximum Pacific deep waters.
    Repository Name: EPIC Alfred Wegener Institut
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  • 9
    Publication Date: 2021-02-16
    Description: Arctic and subarctic regions are sensitive to climate change and, reversely, provide dramatic feedbacks to the global climate. With a focus on discovering paleoclimate and paleoceanographic evolution in the Arctic and Northwest Pacific Oceans during the last 20,000 years, we proposed this German–Sino cooperation program according to the announcement “Federal Ministry of Education and Research (BMBF) of the Federal Republic of Germany for a German–Sino cooperation program in the marine and polar research”. Our proposed program integrates the advantages of the Arctic and Subarctic marine sediment studies in AWI (Alfred Wegener Institute) and FIO (First Institute of Oceanography). For the first time, the collection of sediment cores can cover all climatological key regions in the Arctic and Northwest Pacific Oceans. Furthermore, the climate modeling work at AWI enables a “Data-Model Syntheses”, which are crucial for exploring the underlying mechanisms of observed changes in proxy records.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , peerRev
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  • 10
    Publication Date: 2019-05-28
    Description: An intercomparison of radiance and irradiance ocean color radiometers (the second laboratory comparison exercise—LCE-2) was organized within the frame of the European Space Agency funded project Fiducial Reference Measurements for Satellite Ocean Color (FRM4SOC) May 8–13, 2017 at Tartu Observatory, Estonia. LCE-2 consisted of three sub-tasks: (1) SI-traceable radiometric calibration of all the participating radiance and irradiance radiometers at the Tartu Observatory just before the comparisons; (2) indoor, laboratory intercomparison using stable radiance and irradiance sources in a controlled environment; (3) outdoor, field intercomparison of natural radiation sources over a natural water surface. The aim of the experiment was to provide a link in the chain of traceability from field measurements of water reflectance to the uniform SI-traceable calibration, and after calibration to verify whether di�erent instruments measuring the same object provide results consistent within the expected uncertainty limits. This paper describes the third phase of LCE-2: The results of the field experiment. The calibration of radiometers and laboratory comparison experiment are presented in a related paper of the same journal issue. Compared to the laboratory comparison, the field intercomparison has demonstrated substantially larger variability between freshly calibrated sensors, because the targets and environmental conditions during radiometric calibration were di�erent, both spectrally and spatially. Major di�erences were found for radiance sensors measuring a sunlit water target at viewing zenith angle of 139� because of the di�erent fields of view. Major di�erences were found for irradiance sensors because of imperfect cosine response of di�users. Variability between individual radiometers did depend significantly also on the type of the sensor and on the specific measurement target. Uniform SI traceable radiometric calibration ensuring fairly good consistency for indoor, laboratory measurements is insu�cient for outdoor, field measurements, mainly due to the di�erent angular variability of illumination. More stringent specifications and individual testing of radiometers for all relevant systematic e�ects (temperature, nonlinearity, spectral stray light, etc.) are needed to reduce biases between instruments and better quantify measurement uncertainties.
    Repository Name: EPIC Alfred Wegener Institut
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  • 11
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    Wiley
    In:  EPIC3Geophysical Research Letters, Wiley, ISSN: 0094-8276
    Publication Date: 2019-06-16
    Description: Satellite‐derived data suggest an increase in annual primary production following the loss of summer sea ice in the Arctic Ocean. The scarcity of field data to corroborate this enhanced algal production incited a collaborative project combining six annual cycles of sequential sediment trap measurements obtained over a 17‐year period in the Eurasian Arctic Ocean. Here we present microalgal fluxes measured at ~200 m to reflect the bulk of algal carbon production. Ice algae contributed to a large proportion of the microalgal carbon export before complete ice melt and possible detection of their production by satellites. In the northern Laptev Sea, annual microalgal carbon fluxes were lower during the 2007 minimum ice extent than in 2006. In 2012, early snowmelt led to early microalgal carbon flux in the Nansen Basin. Hence, a change in the timing of snowmelt and ice algae release may affect productivity and export over the Arctic basins.
    Repository Name: EPIC Alfred Wegener Institut
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  • 12
    Publication Date: 2019-05-28
    Description: An intercomparison of radiance and irradiance ocean color radiometers (The Second Laboratory Comparison Exercise—LCE-2) was organized within the frame of the European Space Agency funded project Fiducial Reference Measurements for Satellite Ocean Color (FRM4SOC) May 8–13, 2017 at Tartu Observatory, Estonia. LCE-2 consisted of three sub-tasks: 1) SI-traceable radiometric calibration of all the participating radiance and irradiance radiometers at the Tartu Observatory just before the comparisons; 2) Indoor intercomparison using stable radiance and irradiance sources in controlled environment; and 3) Outdoor intercomparison of natural radiation sources over terrestrial water surface. The aim of the experiment was to provide one link in the chain of traceability from field measurements of water reflectance to the uniform SI-traceable calibration, and after calibration to verify whether di�erent instruments measuring the same object provide results consistent within the expected uncertainty limits. This paper describes the activities and results of the first two phases of LCE-2: the SI-traceable radiometric calibration and indoor intercomparison, the results of outdoor experiment are presented in a related paper of the same journal issue. The indoor experiment of the LCE-2 has proven that uniform calibration just before the use of radiometers is highly e�ective. Distinct radiometers from di�erent manufacturers operated by di�erent scientists can yield quite close radiance and irradiance results (standard deviation s 〈 1%) under defined conditions. This holds when measuring stable lamp-based targets under stationary laboratory conditions with all the radiometers uniformly calibrated against the same standards just prior to the experiment. In addition, some unification of measurement and data processing must be settled. Uncertaint of radiance and irradiance measurement under these conditions largely consists of the sensor’s calibration uncertainty and of the spread of results obtained by individual sensors measuring the same object.
    Repository Name: EPIC Alfred Wegener Institut
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  • 13
    Publication Date: 2020-08-27
    Description: Sea ice dynamics determine the drift and deformation of sea ice. Nonlinear physics, usually expressed in a viscous‐plastic rheology, makes the sea ice momentum equations notoriously difficult to solve. At increasing sea ice model resolution the nonlinearities become stronger as linear kinematic features (leads) appear in the solutions. Even the standard elastic‐viscous‐plastic (EVP) solver for sea ice dynamics, which was introduced for computational efficiency, becomes computationally very expensive, when accurate solutions are required, because the numerical stability requires very short, and hence more, subcycling time steps at high resolution. Simple modifications to the EVP solver have been shown to remove the influence of the number of subcycles on the numerical stability. At low resolution appropriate solutions can be obtained with only partial convergence based on a significantly reduced number of subcycles as long as the numerical procedure is kept stable. This previous result is extended to high resolution where linear kinematic features start to appear. The computational cost can be strongly reduced in Arctic Ocean simulations with a grid spacing of 4.5 km by using modified and adaptive EVP versions because fewer subcycles are required to simulate sea ice fields with the same characteristics as with the standard EVP.
    Repository Name: EPIC Alfred Wegener Institut
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  • 14
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    MDPI
    In:  EPIC3Remote Sensing, MDPI, 11(9), pp. 1-18, ISSN: 2072-4292
    Publication Date: 2019-05-20
    Description: Real-time quality-controlled surface current data derived from X-Band marine radar (MR) measurements were evaluated to estimate their operational reliability. The presented data were acquired by the standard commercial o�-the-shelf MR-based sigma s6 WaMoS® II (WaMoS® II) deployed onboard the German Research vessel Polarstern. The measurement reliability is specified by an IQ value obtained by the WaMoS® II real-time quality control (rtQC). Data which pass the rtQC without objection are assumed to be reliable. For these data sets accuracy and correlation with corresponding vessel-mounted acoustic Doppler current profiler (ADCP) measurements are determined. To reduce potential misinterpretation due to short-term oceanic variability/turbulences, the evaluation of the WaMoS® II accuracy was carried out based on sliding means over 20 min of the reliable data only. The associated standard deviation �WaMoS = 0.02 m/s of the meanWaMoS® II measurements reflect a high precision of the measurement and the successful rtQC during di�erent wave, current and weather conditions. The direct comparison of 7272 WaMoS® II/ADCP northward and eastward velocity data pairs yield a correlation of r � 0.94, with jbiasDj � 0.06 m/s and �S = 0.05 m/s. This confirms that the MR-based surface current measurements are accurate and reliable.
    Repository Name: EPIC Alfred Wegener Institut
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  • 15
    Publication Date: 2019-07-15
    Description: Quaternary East Asian winter monsoon (EAWM) evolution has long been attributed to high‐latitude Northern Hemisphere climate change. However, it cannot explain the distinct relationships of the EAWM in the northern and southern East Asian marginal sea in paleoclimatic records. Here we present an EAWM record of the northern East China Sea over the past 300 ka and a transient climate simulation with the Kiel Climate Model through the Holocene. Both proxy record and simulation suggest anticorrelated long‐term EAWM evolution between the northern East China Sea and the South China Sea. We suggest that this spatial discrepancy of EAWM can be interpreted as El Niño–Southern Oscillation (ENSO)‐like controlling, which generates cyclonic/anticyclonic wind anomalies in the northern/southern East Asian marginal sea. This research explains much of the controversy in nonorbital scale variability of Quaternary EAWM records in the East Asian marginal sea and supports a potent role of tropical forcing in East Asian winter climate change.
    Repository Name: EPIC Alfred Wegener Institut
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  • 16
    Publication Date: 2019-08-01
    Description: The Weddell Gyre (WG) is one of the main oceanographic features of the Southern Ocean south of the Antarctic Circumpolar Current which plays an influential role in global ocean circulation as well as gas exchange with the atmosphere. We review the state‐of‐the art knowledge concerning the WG from an interdisciplinary perspective, uncovering critical aspects needed to understand this system's role in shaping the future evolution of oceanic heat and carbon uptake over the next decades. The main limitations in our knowledge are related to the conditions in this extreme and remote environment, where the polar night, very low air temperatures and presence of sea ice year‐round hamper field and remotely sensed measurements. We highlight the importance of winter and under‐ice conditions in the southern WG, the role that new technology will play to overcome present‐day sampling limitations, the importance of the WG connectivity to the low‐latitude oceans and atmosphere, and the expected intensification of the WG circulation as the westerly winds intensify. Greater international cooperation is needed to define key sampling locations that can be visited by any research vessel in the region. Existing transects sampled since the 1980s along the Prime Meridian and along an East‐West section at ~62°S should be maintained with regularity to provide answers to the relevant questions. This approach will provide long‐term data to determine trends and will improve representation of processes for regional, Antarctic‐wide and global modeling efforts – thereby enhancing predictions of the WG in global ocean circulation and climate.
    Repository Name: EPIC Alfred Wegener Institut
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  • 17
    Publication Date: 2020-07-02
    Description: The East Antarctic Ice Sheet (EAIS) is underlain by a series of low‐lying subglacial sedimentary basins. The extent, geology, and basal topography of these sedimentary basins are important boundary conditions governing the dynamics of the overlying ice sheet. This is particularly pertinent for basins close to the grounding line wherein the EAIS is grounded below sea level and therefore potentially vulnerable to rapid retreat. Here we analyze newly acquired airborne geophysical data over the Pensacola‐Pole Basin (PPB), a previously unexplored sector of the EAIS. Using a combination of gravity and magnetic and ice‐penetrating radar data, we present the first detailed subglacial sedimentary basin model for the PPB. Radar data reveal that the PPB is defined by a topographic depression situated ~500 m below sea level. Gravity and magnetic depth‐to‐source modeling indicate that the southern part of the basin is underlain by a sedimentary succession 2–3 km thick. This is interpreted as an equivalent of the Beacon Supergroup and associated Ferrar dolerites that are exposed along the margin of East Antarctica. However, we find that similar rocks appear to be largely absent from the northern part of the basin, close to the present‐day grounding line. In addition, the eastern margin of the basin is characterized by a major geological boundary and a system of overdeepened subglacial troughs. We suggest that these characteristics of the basin may reflect the behavior of past ice sheets and/or exert an influence on the present‐day dynamics of the overlying EAIS.
    Repository Name: EPIC Alfred Wegener Institut
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  • 18
    Publication Date: 2020-02-12
    Description: Dinoflagellates are microbial eukaryotes that have exceptionally large nuclear genomes; however, their organelle genomes are small and fragmented and contain fewer genes than those of other eukaryotes. The genus Amoebophrya (Syndiniales) comprises endoparasites with high genetic diversity that can infect other dinoflagellates, such as those forming harmful algal blooms (e.g., Alexandrium). We sequenced the genome (~100 Mb) of Amoebophrya ceratii to investigate the early evolution of genomic characters in dinoflagellates. The A. ceratii genome encodes almost all essential biosynthetic pathways for self-sustaining cellular metabolism, suggesting a limited dependency on its host. Although dinoflagellates are thought to have descended from a photosynthetic ancestor, A. ceratii appears to have completely lost its plastid and nearly all genes of plastid origin. Functional mitochondria persist in all life stages of A. ceratii, but we found no evidence for the presence of a mitochondrial genome. Instead, all mitochondrial proteins appear to be lost or encoded in the A. ceratii nucleus.
    Repository Name: EPIC Alfred Wegener Institut
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  • 19
    Publication Date: 2019-09-01
    Description: Coring sediments in subglacial aquatic environments offers unique opportunities for research on paleo-environments and paleo-climates because it can provide data from periods even earlier than ice cores, as well as the overlying ice histories, interactions between ice and the water system, life forms in extreme habitats, sedimentology, and stratigraphy. However, retrieving sediment cores from a subglacial environment faces more difficulties than sediment coring in oceans and lakes, resulting in low yields from the most current subglacial sediment coring methods. The coring tools should pass through a hot water-drilled access borehole, then the water column, to reach the sediment layers. The access boreholes are size-limited by the hot water drilling tools and techniques. These holes are drilled through ice up to 3000–4000 m thick, with diameters ranging from 10–60 cm, and with a refreezing closure rate of up to 6 mm/h after being drilled. Several purpose-built streamline corers have been developed to pass through access boreholes and collect the sediment core. The main coring objectives are as follows: (i) To obtain undisturbed water–sediment cores, either singly or as multi-cores and (ii) to obtain long cores with minimal stratigraphic deformation. Subglacial sediment coring methods use similar tools to those used in lake and ocean coring. These methods include the following: Gravity coring, push coring, piston coring, hammer or percussion coring, vibrocoring, and composite methods. Several core length records have been attained by different coring methods, including a 290 cm percussion core from the sub-ice-shelf seafloor, a 400 cm piston core from the sub-ice-stream, and a 170 cm gravity core from a subglacial lake. There are also several undisturbed water–sediment cores that have been obtained by gravity corers or hammer corers. Most current coring tools are deployed by winch and cable facilities on the ice surface. There are three main limitations for obtaining long sediment cores which determines coring tool development, as follows: Hot-water borehole radial size restriction, the sedimentary structure, and the coring techniques. In this paper, we provide a general view on current developments in coring tools, including the working principles, corer characteristics, operational methods, coring site locations, field conditions, coring results, and possible technical improvements. Future prospects in corer design and development are also discussed.
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  • 20
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    Wiley
    In:  EPIC3Geophysical Research Letters, Wiley, ISSN: 0094-8276
    Publication Date: 2019-09-16
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  • 21
    Publication Date: 2019-10-21
    Description: Air temperatures in the Arctic have increased substantially over the last decades, which has extensively altered the properties of the land surface. Capturing the state and dynamics of Land Surface Temperatures (LSTs) at high spatial detail is of high interest as LST is dependent on a variety of surficial properties and characterizes the land–atmosphere exchange of energy. Accordingly, this study analyses the influence of different physical surface properties on the long-term mean of the summer LST in the Arctic Mackenzie Delta Region (MDR) using Landsat 30 m-resolution imagery between 1985 and 2018 by taking advantage of the cloud computing capabilities of the Google Earth Engine. Multispectral indices, including the Normalized Difference Vegetation Index (NDVI), Normalized Difference Water Index (NDWI) and Tasseled Cap greenness (TCG), brightness (TCB), and wetness (TCW) as well as topographic features derived from the TanDEM-X digital elevation model are used in correlation and multiple linear regression analyses to reveal their influence on the LST. Furthermore, surface alteration trends of the LST, NDVI, and NDWI are revealed using the Theil-Sen (T-S) regression method. The results indicate that the mean summer LST appears to be mostly influenced by the topographic exposition as well as the prevalent moisture regime where higher evapotranspiration rates increase the latent heat flux and cause a cooling of the surface, as the variance is best explained by the TCW and northness of the terrain. However, fairly diverse model outcomes for different regions of the MDR (R2 from 0.31 to 0.74 and RMSE from 0.51 °C to 1.73 °C) highlight the heterogeneity of the landscape in terms of influential factors and suggests accounting for a broad spectrum of different factors when modeling mean LSTs. The T-S analysis revealed large-scale wetting and greening trends with a mean decadal increase of the NDVI/NDWI of approximately +0.03 between 1985 and 2018, which was mostly accompanied by a cooling of the land surface given the inverse relationship between mean LSTs and vegetation and moisture conditions. Disturbance through wildfires intensifies the surface alterations locally and lead to significantly cooler LSTs in the long-term compared to the undisturbed surroundings.
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  • 22
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    Wiley
    In:  EPIC3Geophysical Research Letters, Wiley, 46(8), pp. 4413-4420, ISSN: 0094-8276
    Publication Date: 2019-10-07
    Description: The Red Sea is a deep marine basin often considered as small‐scale version of the global ocean. Hydrographic observations and ocean‐atmosphere modeling indicate Red Sea deep water was episodically renewed by wintertime open‐ocean deep convections during 1982–2001, suggesting a renewal time on the order of a decade. However, the long‐term pacing of Red Sea deep water renewals is largely uncertain. We use an annually resolved coral oxygen isotope record of winter surface water conditions to show that the late twentieth century deep water renewals were probably unusual in the context of the preceding ~100 years. More frequent major events are detected during the late Little Ice Age, particularly during the early nineteenth century characterized by large tropical volcanic eruptions. We conclude that Red Sea deep water renewal time is on the order of a decade up to a century, depending on the mean climatic conditions and large‐scale interannual climate forcing.
    Repository Name: EPIC Alfred Wegener Institut
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  • 23
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    American Geophysical Union
    In:  EPIC3Earth's Future, American Geophysical Union, 7(12), pp. 1296-1306, ISSN: 2328-4277
    Publication Date: 2021-02-15
    Description: To counteract global warming, a geoengineering approach that aims at intervening in the Arctic ice‐albedo feedback has been proposed. A large number of wind‐driven pumps shall spread seawater on the surface in winter to enhance ice growth, allowing more ice to survive the summer melt. We test this idea with a coupled climate model by modifying the surface exchange processes such that the physical effect of the pumps is simulated. Based on experiments with RCP 8.5 scenario forcing, we find that it is possible to keep the late‐summer sea ice cover at the current extent for the next ∼60 years. The increased ice extent is accompanied by significant Arctic late‐summer cooling by ∼1.3 K on average north of the polar circle (2021–2060). However, this cooling is not conveyed to lower latitudes. Moreover, the Arctic experiences substantial winter warming in regions with active pumps. The global annual‐mean near‐surface air temperature is reduced by only 0.02 K (2021–2060). Our results cast doubt on the potential of sea ice targeted geoengineering to mitigate climate change.
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  • 24
    Publication Date: 2021-07-23
    Description: In this work, laboratory tests with live bivalves as well as the conceptual design of additively manufactured surrogate models are presented. The overall task of this work is to develop a surrogate best fitting to the live mussels tested in accordance to the identified surface descriptor, i.e., the Abbott–Firestone Curve, and to the hydrodynamic behaviour by means of drag and inertia coefficients. To date, very few investigations have focused on loads from currents as well as waves. Therefore, tests with a towing carriage were carried out in a wave flume. A custom-made rack using mounting clamps was built to facilitate carriage-run tests with minimal delays. Blue mussels (Mytilus edulis) extracted from a site in Germany, which were kept in aerated seawater to ensure their survival for the test duration, were used. A set of preliminary results showed drag and inertia coefficients CD and CM ranging from 1.16–3.03 and 0.25 to 1.25. To derive geometrical models of the mussel dropper lines, 3-D point clouds were prepared by means of 3-D laser scanning to obtain a realistic surface model. Centered on the 3-D point cloud, a suitable descriptor for the mass distribution over the surface was identified and three 3-D printed surrogates of the blue mussel were developed for further testing. These were evaluated regarding their fit to the original 3-D point cloud of the live blue mussels via the chosen surface descriptor.
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  • 25
    Publication Date: 2020-01-07
    Description: Ocean heat transport through the Barents Sea Opening (BSO) has strong impacts on the Barents Sea ice extent and the climate. In this paper we quantified the contributions from different atmospheric forcing components to the trend and interannual variability of the BSO heat transport. Ocean‐ice model simulations were conducted in which the interannual variation of atmospheric forcing was maintained only in or outside the Arctic in two different simulations. The sum of their BSO heat transport anomalies reasonably replicated the trend and variability from a hindcast simulation. The upward trend of the BSO heat transport mainly stems from the increasing ocean temperature in the subpolar North Atlantic. For the interannual variability, the local wind and upstream forcing are similarly important. The location of the Atlantic Water boundary current in the Nordic Seas, influenced by the cyclonic atmospheric circulation, is crucial in determining part of the BSO inflow variability.
    Repository Name: EPIC Alfred Wegener Institut
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  • 26
    Publication Date: 2019-12-28
    Description: Kelps are important providers and constituents of marine ecological niches, the coastal kelp forests. Kelp species have differing distribution ranges, but mainly thrive in temperate and arctic regions. Although the principal factors determining biogeographic distribution ranges are known, genomics could provide additional answers to this question. We sequenced DNA from two Laminaria species with contrasting distribution ranges, Laminaria digitata and Laminaria solidungula. Laminaria digitata is found in the Northern Atlantic with a southern boundary in Brittany (France) or Massachusetts (USA) and a northern boundary in the Arctic, whereas L. solidungula is endemic to the Arctic only. From the raw reads of DNA, we reconstructed both chloroplast genomes and annotated them. A concatenated data set of all available brown algae chloroplast sequences was used for the calculation of a robust phylogeny, and sequence variations were analyzed. The two Laminaria chloroplast genomes are collinear to previously analyzed kelp chloroplast genomes with important exceptions. Rearrangements at the inverted repeat regions led to the pseudogenization of ycf37 in L. solidungula, a gene possibly required under high light conditions. This defunct gene might be one of the reasons why the habitat range of L. solidungula is restricted to lowlight sublittoral sites in the Arctic. The inheritance pattern of single nucleotide polymorphisms suggests incomplete lineage sorting of chloroplast genomes in kelp species. Our analysis of kelp chloroplast genomes shows that not only evolutionary information could be gleaned from sequence data. Concomitantly, those sequences can also tell us something about the ecological conditions which are required for species well‐being.
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  • 27
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    Wiley
    In:  EPIC3Biologie in unserer Zeit, Wiley, 49(6), pp. 436-442, ISSN: 0045-205X
    Publication Date: 2019-12-20
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  • 28
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    American Geophysical Union
    In:  EPIC3AGU Fall meeting, San Francisco, CA, 2019-12-09-2019-12-13USA, American Geophysical Union
    Publication Date: 2019-12-17
    Description: During the last decade the Arctic has experienced increasing human development while many native communities continue to live a subsistence lifestyle. Off-road winter tundra travel for resource exploration is most cost effective and least environmentally damaging during winter when the tundra is frozen and snow covered. Climate warming, which is occurring at an amplified rate in the Arctic, likely changes the period when access to the off-road tundra travel is possible. There currently exists, however, large uncertainty as to how climate change will impact the low-cost winter travel access across the tundra. Here we defined safe tundra access when soil temperatures are below a soil type dependent freezing temperature and snow cover is at least 20 cm. Our analysis is based on the simulated soil temperatures and snow depths of Land Surface Models (LSMs) contributing to “The Inter-Sectoral Impact Model Intercomparison Project” (ISIMIP). ISIMIP simulations are based on a common protocol, the same input data, the same spatial (0.5°) and temporal resolution (daily modeling output), and span over the period 1861-2100. The LSMs are forced by four different bias-corrected global circulation models (IPSL-CM5A-LR, GFDL-ESM2M, MIROC5, HadGEM2-ES) and three different future conditions (represented via representative concentration pathways (RCP) 2.6, 6.0, 8.5). The simulation results of our model ensemble (60 model combinations) show consistent permafrost warming and changing snow cover patterns at 60°N. Annual off-road tundra travel is considerably reduced (〉50%) under future climate change scenarios, especially under the RCP8.5. The main reduction can be observed in the spring and autumn (〉30%). The results of the multi-model ensemble differ in magnitude, however, their overall trend is consistent. Our results suggest a high vulnerability and substantial changes to the (subsistence) livelihoods of native communities and increasing costs for off-road resource exploration.
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  • 29
    Publication Date: 2021-02-16
    Description: A new global climate model setup using FESOM2.0 for the sea ice‐ocean component and ECHAM6.3 for the atmosphere and land surface has been developed. Replacing FESOM1.4 by FESOM2.0 promises a higher efficiency of the new climate setup compared to its predecessor. The new setup allows for long‐term climate integrations using a locally eddy‐resolving ocean. Here it is evaluated in terms of (1) the mean state and long‐term drift under preindustrial climate conditions, (2) the fidelity in simulating the historical warming, and (3) differences between coarse and eddy‐resolving ocean configurations. The results show that the realism of the new climate setup is overall within the range of existing models. In terms of oceanic temperatures, the historical warming signal is of smaller amplitude than the model drift in case of a relatively short spin‐up. However, it is argued that the strategy of “de‐drifting” climate runs after the short spin‐up, proposed by the HighResMIP protocol, allows one to isolate the warming signal. Moreover, the eddy‐permitting/resolving ocean setup shows notable improvements regarding the simulation of oceanic surface temperatures, in particular in the Southern Ocean.
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  • 30
    Publication Date: 2020-01-27
    Description: The Central Asian Pamir Mountains (Pamirs) are a high‐altitude region sensitive to climatic change, with only few paleoclimatic records available. To examine the glacial‐interglacial hydrological changes in the region, we analyzed the geochemical parameters of a 31‐kyr record from Lake Karakul and performed a set of experiments with climate models to interpret the results. δD values of terrestrial biomarkers showed insolation‐driven trends reflecting major shifts of water vapor sources. For aquatic biomarkers, positive δD shifts driven by changes in precipitation seasonality were observed at ca. 31–30, 28–26, and 17–14 kyr BP. Multiproxy paleoecological data and modelling results suggest that increased water availability, induced by decreased summer evaporation, triggered higher lake levels during those episodes, possibly synchronous to northern hemispheric rapid climate events. We conclude that seasonal changes in precipitation‐evaporation balance significantly influenced the hydrological state of a large waterbody such as Lake Karakul, while annual precipitation amount and inflows remained fairly constant.
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  • 31
    Publication Date: 2020-02-12
    Description: Climate change and sustainable use of natural capital demand increased collaboration across the sciences. The first steps for effective collaboration often focus on improving interoperability between observation and analyses methodologies. This is traditionally done through a combination of standards and best practices. The ocean observation community and observing infrastructures - with regionally diverse members working in physics, chemistry, biology and engineering - is looking toward a dynamic consensus-building approach to match the rapid pace of technological evolution. This is an essential part of the long-term cooperation among ocean observing infrastructures. In the last 12 months, the ocean observing community has implemented an Ocean Best Practices System (OBPS). This System was recently adopted by the Intergovernmental Ocean Commission as an international project under GOOS and IODE. The System consists of a permanent OBPS repository hosted by IODE with state-of-the-art semantic discovery and metadata indexing for improved access to best practices and, eventually, to the data associated with them. There have been discussions to understand how to deal with differing best practices and standards on the same observation or analyses objective and other issues that arise from a comprehensive ocean best practices system. A recent survey, to be described, offers options on alternative approaches. Further, we have created a forum, in “Frontiers in Marine Science” for discussion of best practices and their applications. This presentation will cover options for evolving and sustaining ocean best practices across infrastructures. The recommendations build upon the community survey, the OGC experience, the outcomes of the OceanObs’19 conference as well as inputs from the Decade for Ocean Sciences community meetings. The extension of this work to other communities will also be examined.
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  • 32
    Publication Date: 2020-05-14
    Description: IODP Exp. 383 recovered two Pleistocene sedimentary sequences from the upper continental slope along the southernmost Chilean margin that are well positioned to monitor changes in the Antarctic Circumpolar Current (ACC) upstream of the Drake Passage and the history of Patagonian glaciation. These sites are characterized by high sedimentation rates and a complex distribution of siliciclastic sediments with infrequent decimeter-scale beds of calcareous biogenic sediments. Unravelling ocean circulation and climate history from these sites requires a primary understanding of sedimentary provenance and transport mechanisms derived from a complete lithological characterization of the sequence. Here, we integrate downcore shipboard physical properties with sedimentological observations to fully characterize the sequences, evaluate potential for correlation and constrain regional depositional processes. Site U1542 (52°S; 1101 m water depth) consists of a 249 m spliced sedimentary sequence containing Middle Pleistocene to Holocene sediments. It mainly consists of clayey silt that is often interbedded with thin (~75 cm) beds of calcareous sand-bearing clayey to sandy silt with foraminifera and nannofossils or foraminifera-rich nannofossil ooze. Site U1544 (55°S; 2090 m water depth) consists of a 98 m sedimentary sequence obtained from a single hole. Sediments are also dominated by silty clay, but exhibit slightly thicker beds of calcareous ooze and a significantly higher proportion of cm- to dm-scale sand beds that are interpreted as turbidites. Based on the lithology of the recovered sediments and proximity to a glaciated continental margin, terrigenous sediment is likely delivered to these locations by a combination of ice rafting, glacial meltwater plumes, episodic downslope transport from the outer continental shelf and fine-grained sediments transported by the Cape Horn Current entering the Drake Passage as the northern branch of the ACC.
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  • 33
    Publication Date: 2020-06-03
    Description: - We provide the first isotopic geochronological constraints on brittle deformation in the NA by illite K-Ar dating of brittle fault rocks - A combined structural-geochronological approach constrains a Late Miocene-Early Pliocene regional compressive stress state
    Description: The Northern Apennines (NA) orogenic wedge formed during Oligocene-Miocene convergence and westward subduction of Adria beneath the European Plate. Extension ensued in the Mid-Late Miocene in response to Adria roll-back, causing opening of the back-arc Northern Tyrrhenian Sea. Whether extension continues uninterrupted since the Mid-Late Miocene or it was punctuated by short-lived compressional events, remains, however, uncertain. We used the K-Ar method to date a set of brittle-ductile and brittle deformation zones from the Island of Elba to contribute to this debate. We dated the low-angle Zuccale Fault (ZF), the Capo Norsi-Monte Arco Thrust (CN-MAT), and the Calanchiole Shear Zone (CSZ). The CN-MAT and CSZ are moderately west dipping, top-to-the-east thrusts in the immediate footwall of the ZF. The CSZ slipped 6.14 ± 0.64 Ma (〈0.1 μm fraction) and the CN-MAT 4.90 ± 0.27 Ma ago (〈0.4 μm fraction). The ZF, although cutting the two other faults, yielded an older age of 7.58 ± 0.11 Ma (〈0.1 μm fraction). The ZF gouge, however, contains an illitic detrital contaminant from the Paleozoic age flysch deformed in its hanging wall and the age thus is a maximum faulting age. Removal of ~1% of a 300-Ma-old contaminant brings the ZF faulting age to 〈4.90 Ma. Our results provide the first direct dating of brittle deformation in the Apennines, constraining Late Miocene-Early Pliocene regional compression. They call for a refinement of current NA geodynamic models in the framework of the Northern Tyrrhenian Sea extension.
    Description: Published
    Description: 3229–3243
    Description: 1T. Struttura della Terra
    Description: JCR Journal
    Keywords: K-Ar dating fault gouge ; Northern Apennines ; Elba Island ; Neogene geodynamics
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  • 34
    Publication Date: 2019-03-06
    Description: On behalf of the authors and readers of Reviews of Geophysics, the American Geophysical Union, and the broader scientific community, the Editors wish to wholeheartedly thank those who reviewed the manuscripts for Reviews of Geophysics in 2017. The journal could not exist without your investment of time and effort, lending your expertise to ensure that the papers published in this journal meet the standards that the research community expects for it. We sincerely appreciate all that you do, and we are very grateful for your willingness and readiness to serve in this role.
    Description: Published
    Description: 566
    Description: 1VV. Altro
    Description: JCR Journal
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  • 35
    Publication Date: 2019-03-29
    Description: Pore Pressure Pulse Drove the 2012 Emilia (Italy)Series of EarthquakesGiuseppe Pezzo1, Pasquale De Gori1, Francesco Pio Lucente1, and Claudio Chiarabba11Istituto Nazionale di Geofisica e Vulcanologia, Rome, ItalyAbstractThe 2012 Emilia earthquakes sequence is thefirst debated case in Italy of destructive eventpossibly induced by anthropic activity. During this sequence, two main earthquakes occurred separated by9 days on contiguous thrust faults. Scientific commissions engaged by the Italian government reportedcomplementary scenarios on the potential trigger mechanism ascribable to exploitation of a nearby oilfield.In this study, we combine a refined geodetic source model constrained by precise aftershock locationsand an improved tomographic model of the area to define the geometrical relation between the activatedfaults and investigate possible triggering mechanisms. An aftershock decay rate that deviates from theclassical Omori-like pattern andVp/Vschanges along the fault system suggests that natural pore pressurepulse drove the space-time evolution of seismicity and the activation of the second main shock
    Description: Published
    Description: 682-690
    Description: 4T. Sismicità dell'Italia
    Description: JCR Journal
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  • 36
    Publication Date: 2019-03-29
    Description: Near-fault ground motion records often present impulsive signals, characterized by a largeamplitude in the velocity wavefield and by the energy concentrated in a short time window as comparedto the total earthquake duration. Thispulse-likebehavior is ascribed to the directivity of the seismic rupture,and it requires a stronger demand to the buildings not predicted by the classical design spectra. In this workwe investigate the pulse occurrence and duration in near-fault synthetic seismograms generated from anensemble ofk 2source models. We exploited the fault geometry of theMw= 6.3, 2009 L’Aquila earthquake,which represents a typical example of normal-fault earthquake for which several records in the fault vicinityare available for comparison with synthetics. We show that impulsive records are sensitive to the rupturevelocity, to the hypocenter depth, and to the station location, whether it is on the hanging wall or on thefootwall. The pulse duration was also shown to be proportional to the risetime, and it scales with thesource-receiver distance and inversely with the rupture velocity. We model these results as an effectof the coupled along-strike and updip directivity
    Description: Published
    Description: 7707-7721
    Description: 6T. Studi di pericolosità sismica e da maremoto
    Description: JCR Journal
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  • 37
    Publication Date: 2019-09-12
    Description: Changes in water level are commonly reported in regions struck by a seismic event. The sign and amplitude of such changes depend on the relative position of measuring points with respect to the hypocenter, and on the poroelastic properties of the rock. We apply a porous media flow model (TOUGH2) to describe groundwater flow and water‐level changes associated with the first ML5.9 mainshock of the 2012 seismic sequence in Emilia (Italy). We represent the earthquake as an instantaneous pressure step, whose amplitude was inferred from the properties of the seismic source inverted from geodetic data. The results are consistent with the evolution recorded in both deep and shallow water wells in the area and suggest that our description of the seismic event is suitable to capture both timing and magnitude of water‐level changes. We draw some conclusions about the influence of material heterogeneity on the pore pressure evolution, and we show that to reproduce the observed maximum amplitude it is necessary to take into account compaction in the shallow layer.
    Description: Published
    Description: 452–463
    Description: 4T. Sismicità dell'Italia
    Description: JCR Journal
    Keywords: 2012 Emilia earthquake ; groundwaters ; isotropic stress ; permeability ; porosity ; water wells ; Solid Earth
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  • 38
    Publication Date: 2019-10-28
    Description: On behalf of the authors and readers of Reviews of Geophysics, the American Geophysical Union (AGU), and the broader scientific community, the Editors wish to wholeheartedly thank those who reviewed the manuscripts for Reviews of Geophysics in 2018. Reviews of Geophysics is the top rated journal in Geophysics and Geochemistry and it could not exist without your investment of time and effort, lending your expertise to ensure that the papers published in this journal meet the standards that the research community expects for it. We sincerely appreciate the time spent reading and commenting on manuscripts, and we are very grateful for your willingness and readiness to serve in this role. Reviews of Geophysics published 20 review papers and an editorial in 2018, covering most of the AGU Section topics, and for this we were able to rely on the efforts of 85 dedicated reviewers from 20 countries. Many reviewers answered the call multiple times. Thank you again. We look forward to a 2019 of exciting advances in the field and communicating those advances to our community and to the broader public.
    Description: Published
    Description: 4
    Description: 5TM. Informazione ed editoria
    Description: JCR Journal
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  • 39
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    Wiley
    In:  EPIC3Journal of Geophysical Research-Earth Surface, Wiley, ISSN: 0148-0227
    Publication Date: 2019-04-03
    Description: Peat plateaus and palsas are characteristic morphologies of sporadic permafrost, and the transition from permafrost to permafrost‐free ground typically occurs on spatial scales of meters. They are particularly vulnerable to climate change and are currently degrading in Fennoscandia. Here we present a spatially distributed data set of ground surface temperatures for two peat plateau sites in northern Norway for the year 2015–2016. Based on these data and thermal modeling, we investigate how the snow depth and water balance modulate the climate signal in the ground. We find that mean annual ground surface temperatures are centered around 2 to 2.5 °C for stable permafrost locations and 3.5 to 4.5 °C for permafrost‐free locations. The surface freezing degree days are characterized by a noticeable threshold around 200 °C.day, with most permafrost‐free locations ranging below this value and most stable permafrost ones above it. Freezing degree day values are well correlated to the March snow cover, although some variability is observed and attributed to the ground moisture level. Indeed, a zero curtain effect is observed on temperature time series for saturated soils during winter, while drained peat plateaus show early freezing surface temperatures. Complementarily, modeling experiments allow identifying a drainage effect that can modify 1‐m ground temperatures by up to 2 °C between drained and water accumulating simulations for the same snow cover. This effect can set favorable or unfavorable conditions for permafrost stability under the same climate forcing.
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  • 40
    Publication Date: 2019-05-21
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  • 41
    Publication Date: 2019-06-17
    Description: Automatic detection of icebergs in satellite images is regarded a useful tool to provide information necessary for safety in Arctic shipping or operations over large ocean areas in near-real time. In this work, we investigated the feasibility of automatic iceberg detection in Sentinel-1 Extra Wide Swath (EWS) SAR images which follow the preferred image mode in operational ice charting. As test region, we selected the Barents Sea where the size of many icebergs is on the order of the spatial resolution of the EWS-mode. We tested a new approach for a detection scheme. It is based on a combination of a filter for enhancing the contrast between icebergs and background, subsequent blob detection, and final application of a Constant False Alarm Rate (CFAR) algorithm. The filter relies mainly on the HV-polarized intensity which often reveals a larger difference between icebergs and sea ice or open water. The blob detector identifies locations of potential icebergs and thus shortens computation time. The final detection is performed on the identified blobs using the CFAR algorithm. About 2000 icebergs captured in fast ice were visually identified in Sentinel-2 Multi Spectral Imager (MSI) data and exploited for an assessment of the detection scheme performance using confusion matrices. For our performance tests, we used four Sentinel-1 EWS images. For judging the effect of spatial resolution, we carried out an additional test with one Sentinel-1 Interferometric Wide Swath (IWS) mode image. Our results show that only 8–22 percent of the icebergs could be detected in the EWS images, and over 90 percent of all detections were false alarms. In IWS mode, the number of correctly identified icebergs increased to 38 percent. However, we obtained a larger number of false alarms in the IWS image than in the corresponding EWS image. We identified two problems for iceberg detection: 1) with the given frequency–polarization combination, not all icebergs are strong scatterers at HV-polarization, and (2) icebergs and deformation structures present on fast ice can often not be distinguished since both may reveal equally strong responses at HV-polarization.
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  • 42
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    Wiley
    In:  EPIC3Journal of Geophysical Research-Atmospheres, Wiley, 124(2), pp. 858-869, ISSN: 0148-0227
    Publication Date: 2019-02-25
    Description: We characterize the differences in the upward planetary‐scale wave propagation during observed weak polar vortex (WPV) events between heavy‐ and light‐sea‐ice years in the Barents‐Kara Sea based on a composite analysis for the period of 1979–2015. Upward wave propagation during WPV events in heavy‐ice years is dominated by the wavenumber 1 component. In contrast, WPV events occurring in light‐ice years are characterized by stronger wavenumber 2 propagation, which is caused by the tropospheric wavenumber 2 response to sea‐ice reduction in the Barents‐Kara Sea. The above observed features are supported by an Atmospheric General Circulation Model experiment. Thus, under present climate conditions, Arctic sea‐ice loss is a possible factor modulating the wave propagation during the WPV events. We also find that the WPV events in light‐ice years have stronger stratosphere‐troposphere coupling, followed by colder midlatitude surface conditions particularly over Eurasia.
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  • 43
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    Wiley
    In:  EPIC3Journal of Geophysical Research-Earth Surface, Wiley, 124, pp. 216-228, ISSN: 0148-0227
    Publication Date: 2019-08-14
    Description: This study assesses the response on ice dynamics of Petermann Glacier, a major outlet glacier in northern Greenland, to the 2012 and a possible future calving event. So far Petermann Glacier has been believed to be dynamically stable as another large calving event in 2010 had no significant impact on flow velocity or grounding line retreat. By analyzing a time series of remotely sensed surface velocities, we find an average acceleration of 10% between winter 2011/2012 and winter 2016/2017. This increase in surface velocity is not linear but can be separated into two parts, starting in 2012 and 2016 respectively. By conducting modeling experiments, we show that the first speedup can be directly connected to the 2012 calving event, while the second speedup is not captured. However, on recent remote sensing imagery newly developing fractures are clearly visible ∼12 km upstream from the terminus, propagating from the eastern fjord wall to the center of the ice tongue, indicating a possible future calving event. By including these fracture zones as a new terminus position in the modeling domain, we are able to reproduce the second speedup, suggesting that surface velocities remain on the 2016/2017 level after the anticipated calving event. This indicates that, from a dynamical point of view, the terminus region has already detached from the main ice tongue.
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  • 44
    Publication Date: 2019-04-23
    Description: Thermokarst lakes in the Arctic and Subarctic release carbon from thawing permafrost in the form of methane and carbon dioxide with important implications for regional and global carbon cycles. Lake ice impedes the release of gas during the winter. For instance, bubbles released from lake sediments become trapped in downward growing lake ice, resulting in vertically-oriented bubble columns in the ice that are visible on the lake surface. We here describe a classification technique using an object-based image analysis (OBIA) framework to successfully map ebullition bubbles in airborne imagery of early winter ice on an interior Alaska thermokarst lake. Ebullition bubbles appear as white patches in high-resolution optical remote sensing images of snow-free lake ice acquired in early winter and, thus, can be mapped across whole lake areas. We used high-resolution (9–11 cm) aerial images acquired two and four days following freeze-up in the years 2011 and 2012, respectively. The design of multiresolution segmentation and region-specific classification rulesets allowed the identification of bubble features and separation from other confounding factors such as snow, submerged and floating vegetation, shadows, and open water. The OBIA technique had an accuracy of 〉95% for mapping ebullition bubble patches in early winter lake ice. Overall, we mapped 1195 and 1860 ebullition bubble patches in the 2011 and 2012 images, respectively. The percent surface area of lake ice covered with ebullition bubble patches for 2011 was 2.14% and for 2012 was 2.67%, representing a conservative whole lake estimate of bubble patches compared to ground surveys usually conducted on thicker ice 10 or more days after freeze-up. Our findings suggest that the information derived from high-resolution optical images of lake ice can supplement spatially limited field sampling methods to better estimate methane flux from individual lakes. The method can also be used to improve estimates of methane ebullition from numerous lakes within larger regions.
    Repository Name: EPIC Alfred Wegener Institut
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  • 45
    Publication Date: 2019-11-25
    Description: The progress of science is tied to the standardization of measurements, instruments, and data. This is especially true in the Big Data age, where analyzing large data volumes critically hinges on the data being standardized. Accordingly, the lack of community‐sanctioned data standards in paleoclimatology has largely precluded the benefits of Big Data advances in the field. Building upon recent efforts to standardize the format and terminology of paleoclimate data, this article describes the Paleoclimate Community reporTing Standard (PaCTS), a crowdsourced reporting standard for such data. PaCTS captures which information should be included when reporting paleoclimate data, with the goal of maximizing the reuse value of paleoclimate data sets, particularly for synthesis work and comparison to climate model simulations. Initiated by the LinkedEarth project, the process to elicit a reporting standard involved an international workshop in 2016, various forms of digital community engagement over the next few years, and grassroots working groups. Participants in this process identified important properties across paleoclimate archives, in addition to the reporting of uncertainties and chronologies; they also identified archive‐specific properties and distinguished reporting standards for new versus legacy data sets. This work shows that at least 135 respondents overwhelmingly support a drastic increase in the amount of metadata accompanying paleoclimate data sets. Since such goals are at odds with present practices, we discuss a transparent path toward implementing or revising these recommendations in the near future, using both bottom‐up and top‐down approaches.
    Repository Name: EPIC Alfred Wegener Institut
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  • 46
    Publication Date: 2019-09-10
    Description: Microalgae are capable of acclimating to dynamic light environments, as they have developed mechanisms to optimize light harvesting and photosynthetic electron transport. When absorption of light exceeds photosynthetic capacity, various physiological protective mechanisms prevent damage of the photosynthetic apparatus. Xanthophyll pigments provide one of the most important photoprotective mechanisms to dissipate the excess light energy and prevent photoinhibition. In this study, we coupled a mechanistic model for phytoplankton photoinhibition with the global biogeochemical model Regulated Ecosystem Model version 2. The assumption that photoinhibition is small in phytoplankton communities acclimated to ambient light allowed us to predict the photoprotective needs of phytoplankton. When comparing the predicted photoprotective needs to observations of pigment content determined by high‐performance liquid chromatography, our results showed that photoprotective response seems to be mediated in most parts of the ocean by a variable ratio of xanthophyll pigments to chlorophyll. The variability in the ratio appeared to be mainly driven by changes in phytoplankton community composition. Exceptions appeared at high latitudes where other energy dissipating mechanisms seem to play a role in photoprotection and both taxonomic changes and physiological acclimation determine community pigment signature. Understanding the variability of community pigment signature is crucial for modeling the coupling of light absorption to carbon fixation in the ocean. Insights about how much of this variability is attributable to changes in community composition may allow us to improve the match between remotely sensed optical data and the underlying phytoplankton community.
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  • 47
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    American Geophysical Union
    In:  EPIC3AGU Fall meeting 2019, San Francisco, CA, 2019-12-09-2019-12-13USA, American Geophysical Union
    Publication Date: 2021-08-16
    Description: Deciduous larch is a weak competitor when growing in mixed stands with evergreen taxa but is dominant in many boreal forest areas of Eastern Siberia. However, it is hypothesized that certain factors such as a shallow active layer thickness and high fire frequency favor larch dominance. Our aim is to understand how thermohydrological interactions between vegetation, permafrost, and atmosphere stabilize the larch forests and the underlying permafrost in Eastern Siberia. A tailored version of a one-dimensional land surface model (CryoGrid) is adapted for the application in vegetated areas and used to reproduce the energy transfer and thermal regime of permafrost ground in typical boreal larch stands. In order to simulate the responds of Arctic trees to local climate and permafrost conditions we have implemented a multilayer canopy parameterization originally developed for the Community Land Model (CLM-ml_v0). The coupled model is capable of calculating the full energy balance above, within and below the canopy including the radiation budget, the turbulent fluxes and the heat budget of the permafrost ground under several forcing scenarios. We will present first results of simulations performed for different study sites in larch-dominated forests of Eastern Siberia and Mongolia under current and future climate conditions. Model performance is thoroughly evaluated based on comprehensive in-situ soil temperature and radiation measurements at our study sites.
    Repository Name: EPIC Alfred Wegener Institut
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  • 48
    Publication Date: 2019-01-07
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Noble gases in deepwater oils of the U.S. Gulf of Mexico. Geochemistry, Geophysics, Geosystems , 19, 4218 – 4235.(2018): doi:10.1029/2018GC007654.
    Description: Hydrocarbon migration and emplacement processes remain underconstrained despite the vast potential economic value associated with oil and gas. Noble gases provide information about hydrocarbon generation, fluid migration pathways, reservoir conditions, and the relative volumes of oil versus water in the subsurface. Produced gas He-Ne-Ar-Kr-Xe data from two distinct oil fields in the Gulf of Mexico (Genesis and Hoover-Diana) are used to calibrate a model that takes into account both water-oil solubility exchange and subsequent gas cap formation. Reconstructed noble gas signatures in oils reflect simple (two-phase) oil-water exchange imparted during migration from the source rock to the trap, which are subsequently modified by gas cap formation at current reservoir conditions. Calculated, oil to water volume ratios (Vo/Vw) in Tertiary-sourced oils from the Hoover-Diana system are 2–3 times greater on average than those in the Jurassic sourced oils from the Genesis reservoirs. Higher Vo/Vw in Hoover-Diana versus Genesis can be interpreted in two ways: either (1) the Hoover reservoir interval has 2–3 times more oil than any of the individual Genesis reservoirs, which is consistent with independent estimates of oil in place for the respective reservoirs, or (2) Genesis oils have experienced longer migration pathways than Hoover-Diana oils and thus have interacted with more water. The ability to determine a robust Vo/Vw , despite gas cap formation and possible gas cap loss, is extremely powerful. For example, when volumetric hydrocarbon ratios are combined with independent estimates of hydrocarbon migration distance and/or formation fluid volumes, this technique has the potential to differentiate between large and small oil accumulations.
    Description: We thank ExxonMobil for funding and providing the samples. In addition, we thank James Scott and two anonymous reviewers for their comprehensive and constructive reviews, as well as Janne Blichert-Toft for editorial handling.
    Description: 2019-04-10
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  • 49
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 123(12), (2018): 8674-8687, doi:10.1002/2018JC013766.
    Description: A large collaborative program has studied the coupled air‐ice‐ocean‐wave processes occurring in the Arctic during the autumn ice advance. The program included a field campaign in the western Arctic during the autumn of 2015, with in situ data collection and both aerial and satellite remote sensing. Many of the analyses have focused on using and improving forecast models. Summarizing and synthesizing the results from a series of separate papers, the overall view is of an Arctic shifting to a more seasonal system. The dramatic increase in open water extent and duration in the autumn means that large surface waves and significant surface heat fluxes are now common. When refreezing finally does occur, it is a highly variable process in space and time. Wind and wave events drive episodic advances and retreats of the ice edge, with associated variations in sea ice formation types (e.g., pancakes, nilas). This variability becomes imprinted on the winter ice cover, which in turn affects the melt season the following year.
    Description: This program was supported by the Office of Naval Research, Code 32, under Program Managers Scott Harper and Martin Jeffries. The crew of R/V Sikuliaq provide outstanding support in collecting the field data, and the US National Ice Center, German Aerospace Center (DLR), and European Space Agency facilitated the remote sensing collections and daily analysis products. RADARSAT‐2 Data and Products are from MacDonald, Dettwiler, and Associates Ltd., courtesy of the U.S. National Ice Center. Data, supporting information, and a cruise report can be found at http://www.apl.uw.edu/arcticseastate
    Keywords: Arctic ; waves ; autumn ; sea ice ; Beaufort ; flux
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  • 50
    Publication Date: 2022-05-25
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Sathyendranath, S., Brewin, R. J. W., Brockmann, C., Brotas, V., Calton, B., Chuprin, A., Cipollini, P., Couto, A. B., Dingle, J., Doerffer, R., Donlon, C., Dowell, M., Farman, A., Grant, M., Groom, S., Horseman, A., Jackson, T., Krasemann, H., Lavender, S., Martinez-Vicente, V., Mazeran, C., Melin, F., Moore, T. S., Muller, D., Regner, P., Roy, S., Steele, C. J., Steinmetz, F., Swinton, J., Taberner, M., Thompson, A., Valente, A., Zuhlke, M., Brando, V. E., Feng, H., Feldman, G., Franz, B. A., Frouin, R., Gould, R. W., Hooker, S. B., Kahru, M., Kratzer, S., Mitchell, B. G., Muller-Karger, F. E., Sosik, H. M., Voss, K. J., Werdell, J., & Platt, T. An ocean-colour time series for use in climate studies: The experience of the ocean-colour climate change initiative (OC-CCI). Sensors, 19(19), (2019): 4285, doi: 10.3390/s19194285.
    Description: Ocean colour is recognised as an Essential Climate Variable (ECV) by the Global Climate Observing System (GCOS); and spectrally-resolved water-leaving radiances (or remote-sensing reflectances) in the visible domain, and chlorophyll-a concentration are identified as required ECV products. Time series of the products at the global scale and at high spatial resolution, derived from ocean-colour data, are key to studying the dynamics of phytoplankton at seasonal and inter-annual scales; their role in marine biogeochemistry; the global carbon cycle; the modulation of how phytoplankton distribute solar-induced heat in the upper layers of the ocean; and the response of the marine ecosystem to climate variability and change. However, generating a long time series of these products from ocean-colour data is not a trivial task: algorithms that are best suited for climate studies have to be selected from a number that are available for atmospheric correction of the satellite signal and for retrieval of chlorophyll-a concentration; since satellites have a finite life span, data from multiple sensors have to be merged to create a single time series, and any uncorrected inter-sensor biases could introduce artefacts in the series, e.g., different sensors monitor radiances at different wavebands such that producing a consistent time series of reflectances is not straightforward. Another requirement is that the products have to be validated against in situ observations. Furthermore, the uncertainties in the products have to be quantified, ideally on a pixel-by-pixel basis, to facilitate applications and interpretations that are consistent with the quality of the data. This paper outlines an approach that was adopted for generating an ocean-colour time series for climate studies, using data from the MERIS (MEdium spectral Resolution Imaging Spectrometer) sensor of the European Space Agency; the SeaWiFS (Sea-viewing Wide-Field-of-view Sensor) and MODIS-Aqua (Moderate-resolution Imaging Spectroradiometer-Aqua) sensors from the National Aeronautics and Space Administration (USA); and VIIRS (Visible and Infrared Imaging Radiometer Suite) from the National Oceanic and Atmospheric Administration (USA). The time series now covers the period from late 1997 to end of 2018. To ensure that the products meet, as well as possible, the requirements of the user community, marine-ecosystem modellers, and remote-sensing scientists were consulted at the outset on their immediate and longer-term requirements as well as on their expectations of ocean-colour data for use in climate research. Taking the user requirements into account, a series of objective criteria were established, against which available algorithms for processing ocean-colour data were evaluated and ranked. The algorithms that performed best with respect to the climate user requirements were selected to process data from the satellite sensors. Remote-sensing reflectance data from MODIS-Aqua, MERIS, and VIIRS were band-shifted to match the wavebands of SeaWiFS. Overlapping data were used to correct for mean biases between sensors at every pixel. The remote-sensing reflectance data derived from the sensors were merged, and the selected in-water algorithm was applied to the merged data to generate maps of chlorophyll concentration, inherent optical properties at SeaWiFS wavelengths, and the diffuse attenuation coefficient at 490 nm. The merged products were validated against in situ observations. The uncertainties established on the basis of comparisons with in situ data were combined with an optical classification of the remote-sensing reflectance data using a fuzzy-logic approach, and were used to generate uncertainties (root mean square difference and bias) for each product at each pixel.
    Description: This work was funded by the Ocean Colour Climate Change initiative of the European Space Agency (Grant Number 4000101437/10/I-LG). We acknowledge additional funding support by NERC through the National Centre for Earth Observation (Grant Number PR140015). Additional funding from a Simons Foundation Grant (549947, SS) is also gratefully acknowledged. V.B. also acknowledges funding from the European Union’s Horizon 2020 Research and Innovation Programme grant agreement N_ 810139: Project Portugal Twinning for Innovation and Excellence in Marine Science and Earth Observation – PORTWIMS.
    Keywords: ocean colour ; water-leaving radiance ; remote-sensing reflectance ; phytoplankton ; chlorophyll-a ; inherent optical properties ; Climate Change Initiative ; optical water classes ; Essential Climate Variable ; uncertainty characterisation
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  • 51
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 123(12), (2018): 8887-8901, doi:10.1029/2018JC013797.
    Description: Sea ice is one of the determining parameters of the climate system. The presence of melt ponds on the surface of Arctic sea ice plays a critical role in the mass balance of sea ice. A total of nine cores was collected from multiyear ice refrozen melt ponds and adjacent hummocks during the 2015 Arctic Sea State research cruise. The depth profiles of water isotopes, salinity, and ice texture for these sea ice cores were examined to provide information about the development of refrozen melt ponds and water balance generation processes, which are otherwise difficult to acquire. The presence of meteoric water with low oxygen isotope values as relatively thin layers indicates melt pond water stability and little mixing during formation and refreezing. The hydrochemical characteristics of refrozen melt pond and seawater depth profiles indicate little snowmelt enters the upper ocean during melt pond refreezing. Due to the seasonal characters of deuterium excess for Arctic precipitation, water balance calculations utilizing two isotopic tracers (oxygen isotope and deuterium excess) suggest that besides the melt of snow cover, the precipitation input in the melt season may also play a role in the evolution of melt ponds. The dual‐isotope mixing model developed here may become more valuable in a future scenario of increasing Arctic precipitation. The layers of meteoric origin were found at different depths in the refrozen melt pond ice cores. Surface topography information collected at several core sites was examined for possible explanations of different structures of refrozen melt ponds.
    Description: The coauthors (S. F. A., S. S., T. M., and B. W.) wish to thank the other DRI participants and the Captain and crew of the Sikuliaq's October 2015 cruise for their assistance in the sample collections analyzed in the paper. Jim Thomson (Chief Scientist), Scott Harper (ONR Program Manager), and Martin Jeffries (ONR Program Manager) are particularly acknowledged for their unwavering assistance and leadership during the 5 years of the SeaState DRI. We thank Guy Williams for production of the aerial photo mosaic. Funding from the Office of Naval Research N00014‐13‐1‐0435 (S. F. A. and B. W.), N00014‐13‐1‐0434 (S. S.), and N00014‐13‐1‐0446 (T. M.) supported this research through grants to UTSA, UColorado, and WHOI, respectively. This project was also funded (in part) by the University of Texas at San Antonio, Office of the Vice President for Research (Y. G. and S. F. A.). Data for the stable isotope mixing models used in this study are shown in supporting information Tables S1–S3.
    Description: 2019-05-15
    Keywords: Arctic ; sea ice ; isotope tracer ; melt pond ; oxygen isotope ; deuterium excess
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  • 52
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Freymond, C. V., Lupker, M., Peterse, F., Haghipour, N., Wacker, L., Filip, F., et al. (2018). Constraining instantaneous fluxes and integrated compositions of fluvially discharged organic matter. Geochemistry, Geophysics, Geosystems, 19, 2453 2462. doi: 10.1029/2018GC007539.
    Description: Fluvial export of organic carbon (OC) and burial in ocean sediments comprises an important carbon sink, but fluxes remain poorly constrained, particularly for specific organic components. Here OC and lipid biomarker contents and isotopic characteristics of suspended matter determined in depth profiles across an active channel close to the terminus of the Danube River are used to constrain instantaneous OC and biomarker fluxes and integrated compositions during high to moderate discharges. During high (moderate) discharge, the total Danube exports 8 (7) kg/s OC, 7 (3) g/s higher plant‐derived long‐chain fatty acids (LCFA), 34 (21) g/s short‐chain fatty acids (SCFA), and 0.5 (0.2) g/s soil bacterial membrane lipids (brGDGTs). Integrated stable carbon isotopic compositions were TOC: −28.0 (−27.6)‰, LCFA: −33.5 (−32.8)‰ and Δ14C TOC: −129 (−38)‰, LCFA: −134 (−143)‰, respectively. Such estimates will aid in establishing quantitative links between production, export, and burial of OC from the terrestrial biosphere.
    Description: This project was funded by the Swiss National Science Foundation SNF. Grant Number: 200021_140850. F.P. acknowledges funding from NWO‐VENI grant 863.13.016. We thank the sampling crews from both field campaigns (Björn Buggle, James Saenz, Alissa Zuijdgeest, Marilu Tavagna, Stefan Eugen Filip, Silvia Lavinia Filip, Mihai, Clayton Magill, Thomas Blattmann, and Michael Albani), Daniel Montluçon for lab support and Hannah Gies for PCGC work. Figures, tables, and equations can be found in supporting information.
    Keywords: Danube River ; organic carbon ; biomarker ; radiocarbon ; ADCP
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  • 53
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans, 123(11), (2018): 7877-7895. doi: 10.1029/2018JC014290.
    Description: A three‐dimensional, primitive‐equation, ocean circulation model coupled with a Lagrangian particle‐tracking algorithm is used to investigate the dispersal and settlement of planktonic larvae released from discrete hydrothermal habitats on the East Pacific Rise segment at 9–10°N. Model outputs show that mean circulation is anticyclonic around the ridge segment, which consists of a northward flow along the western flank and a southward flow along the eastern flank. Those flank jets are dispersal expressways for the along‐ridge larval transport and strongly affect its overall direction and spatial‐temporal variations. It is evident from model results that the transform faults bounding the ridge segment and off axis topography (the Lamont Seamount Chain) act as topographic barriers to larval dispersal in the along‐ridge direction. Furthermore, the presence of an overlapping spreading center and an adjacent local topographic high impedes the southward along‐ridge larval transport. The model results suggest that larval recolonization within ridge‐crest habitats is enhanced by the anticyclonic circulation around the ridge segment, and the overall recolonization rate is higher for larvae having a short precompetency period and an altitude above the bottom sufficient to avoid influence by the near‐bottom currents Surprisingly, for larvae having a long precompetency period (〉10 days), the prolonged travel time allowed some of those larvae to return to their natal vent clusters, which results in an unexpected increase in connectivity among natal and neighboring sites. Overall, model‐based predictions of connectivity are highly sensitive to the larval precompetency period and vertical position in the water column.
    Description: The sediment‐trap data presented in this paper are included in Table S1. The bathymetric data used in the model can be downloaded from the Global Multi‐Resolution Topography (GMRT) Synthesis of Marine Geoscience Data System (MGDS) (https://www.gmrt.org/GMRTMapTool). The ocean current time series data used in this work were acquired in 2006‐2007 by Andreas Thurnherr at the Earth Institute of Columbia University. Those data can be accessed in the supporting information. D.J. McGillicuddy gratefully acknowledges support from the National Science Foundation and the Holger W. Jannasch and Columbus O'Donnell Iselin Shared Chairs for Excellence in Oceanography. L.S. Mullineaux acknowledges with gratitude support from the National Science Foundation and the Woods Hole Oceanographic Institution (WHOI) Ocean life fellowship. We appreciate the operation support from the Captain and crew of R/V Atlantis and the Alvin submersible group. We are thankful to V.K. Kosnyrev for developing the coupling interface between the ocean‐circulation and particle‐tracking models. We are grateful to J.W. Lavelle for his intellectual support for the modeling work presented in this paper. We thank Houshuo Jiang for sponsoring our use of the cluster computer at WHOI.
    Description: 2019-05-06
    Keywords: larva ; dispersal ; hydrothermal vent ; EPR ; connectivity ; supply
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  • 54
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans, 123(11), (2018): 7983-8003. doi:10.1029/2018JC014298.
    Description: A melt pond (MP) distribution equation has been developed and incorporated into the Marginal Ice‐Zone Modeling and Assimilation System to simulate Arctic MPs and sea ice over 1979–2016. The equation differs from previous MP models and yet benefits from previous studies for MP parameterizations as well as a range of observations for model calibration. Model results show higher magnitude of MP volume per unit ice area and area fraction in most of the Canada Basin and the East Siberian Sea and lower magnitude in the central Arctic. This is consistent with Moderate Resolution Imaging Spectroradiometer observations, evaluated with Measurements of Earth Data for Environmental Analysis (MEDEA) data, and closely related to top ice melt per unit ice area. The model simulates a decrease in the total Arctic sea ice volume and area, owing to a strong increase in bottom and lateral ice melt. The sea ice decline leads to a strong decrease in the total MP volume and area. However, the Arctic‐averaged MP volume per unit ice area and area fraction show weak, statistically insignificant downward trends, which is linked to the fact that MP water drainage per unit ice area is increasing. It is also linked to the fact that MP volume and area decrease relatively faster than ice area. This suggests that overall the actual MP conditions on ice have changed little in the past decades as the ice cover is retreating in response to Arctic warming, thus consistent with the Moderate Resolution Imaging Spectroradiometer observations that show no clear trend in MP area fraction over 2000–2011.
    Description: We gratefully acknowledge the support of the NASA Cryosphere Program (grants NNX15AG68G, NNX17AD27G, and NNX14AH61G), the Office of Naval Research (N00014‐12‐1‐0112), the NSF Office of Polar Programs (PLR‐1416920, PLR‐1603259, PLR‐1602521, and ARC‐1203425), and the Department of Homeland Security (DHS, 2014‐ST‐061‐ML‐0002). The DHS grant is coordinated through the Arctic Domain Awareness Center (ADAC), a DHS Center of Excellence, which conducts maritime research and development for the Arctic region. The views and conclusions in this document are those of the authors and should not be interpreted as representing the official policies, either expressed or implied, of the DHS. MODIS‐derived MP area data are available at https://icdc.cen.uni‐hamburg.de/1/daten/cryosphere/arctic‐meltponds.html. MP area fraction statistics derived from MEDEA images are available from http://psc.apl.uw.edu/melt‐pond‐data/. Sea ice thickness and snow observations are available at http://psc.apl.washington.edu/sea_ice_cdr. CFS forcing data used to drive MIZMAS are available at https://www.ncdc.noaa.gov/data‐access/model‐data/model‐datasets/climate‐forecast‐system‐version2‐cfsv2.
    Description: 2019-04-18
    Keywords: Arctic Ocean ; sea ice ; melt ponds ; numerical modeling ; climate variability
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  • 55
    Publication Date: 2019-10-10
    Description: Understanding the patterns and characteristics of sedimentary deposits on the conjugate Australian‐Antarctic margins is critical to reveal the Cretaceous‐Cenozoic tectonic, oceanographic, and climatic conditions in the basin. However, unraveling its evolution has remained difficult due to the different seismic stratigraphic interpretations on each margin and sparse drill sites. Here, for the first time, we collate all available seismic reflection profiles on both margins and use newly available offshore drilling data to develop a consistent seismic stratigraphic framework across the Australian‐Antarctic basins. We find sedimentation patterns similar in structure and thickness, prior to the onset of Antarctic glaciation, enabling the basinwide correlation of four major sedimentary units and their depositional history. We interpret that during the warm and humid Late Cretaceous (~83–65 Ma), large onshore river systems on both Australia and Antarctica resulted in deltaic sediment deposition offshore. We interpret that the onset of clockwise bottom currents during the early Paleogene (~58–48 Ma) formed prominent sediment drift deposits along both continental rises. We suggest that these currents strengthened and progressed farther east through the Eocene. Coevally, global cooling (〈48 Ma) and progressive aridification led to a large‐scale decrease in sediment input from both continents. Two major Eocene hiatuses recovered by the Integrated Ocean Discovery Program site U1356A at the Antarctic continental slope likely formed during this preglacial phase of low sedimentation and strong bottom currents. Our results can be used to constrain future paleo‐oceanographic modeling of this region and aid the understanding of the oceanographic changes accompanying the transition from a greenhouse to icehouse world.
    Repository Name: EPIC Alfred Wegener Institut
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  • 56
    Publication Date: 2019-09-18
    Description: Increasing sea surface temperatures (SST) and blooms of lipid‐poor, filamentous cyanobacteria can change mesozooplankton metabolism and foraging strategies in marine systems. Lipid shortage and imbalanced diet may challenge the build‐up of energy pools of lipids and proteins, and access to essential fatty acids (FAs) and amino acids (AAs) by copepods. The impact of cyanobacterial blooms on individual energy pools was assessed for key species temperate Temora longicornis and boreal Pseudo‐/Paracalanus spp. that dominated field mesozooplankton communities isolated by sea‐sonal stratification in the central Baltic Sea during the hot and the cold summer. We looked at (a) total lipid and protein levels, (b) FA trophic markers and AA composition, and (c) compound‐specific stable carbon isotopes (δ13C) in bulk mesozooplankton and in a subset of parameters in particulate organic matter. Despite lipid‐poor cyanobacterial blooms, the key species were largely able to cover both energy pools, yet a tendency of lipid reduction was observed in surface animals. Omni‐ and car‐nivory feeding modes, FA trophic makers, and δ13C patterns in essential compounds emphasized that cyanobacterial FAs and AAs have been incorporated into meso‐zooplankton mainly via feeding on mixo‐ and heterotrophic (dino‐) flagellates and detrital complexes during summer. Foraging for essential highly unsaturated FAs from (dino‐) flagellates may have caused night migration of Pseudo‐/Paracalanus spp. from the deep subhalocline waters into the upper waters. Only in the hot summer (SST〉19.0°C) was T. longicornis submerged in the colder subthermocline water (~4°C). Thus, the continuous warming trend and simultaneous feeding can eventually lead to competition on the preferred diet by key copepod species below the thermocline in stratified systems. A comparison of δ13C patterns of essential AAs in surface meso‐zooplankton across sub‐basins of low and high cyanobacterial biomasses revealed the potential of δ13C‐AA isoscapes for studies of commercial fish feeding trails across the Baltic Sea food webs.
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  • 57
    Publication Date: 2019-10-25
    Repository Name: EPIC Alfred Wegener Institut
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  • 58
    Publication Date: 2020-09-01
    Description: In the Northern Patagonian gulfs of Argentina (Golfo Nuevo and Golfo San José), blooms of toxigenic microalgae and the detection of their associated phycotoxins are recurrent phenomena. The present study evaluated the transfer of phycotoxins from toxigenic microalgae to mesozooplankton in Golfo Nuevo and Golfo San José throughout an annual cycle (December 2014–2015 and January 2015–2016, respectively). In addition, solid-phase adsorption toxin tracking (SPATT) samplers were deployed for the first time in these gulfs, to estimate the occurrence of phycotoxins in the seawater between the phytoplankton samplings. Domoic acid was present throughout the annual cycle in SPATT samplers, whereas no paralytic shellfish poisoning toxins were detected. Ten toxigenic species were identified: Alexandrium catenella, Dinophysis acuminata, Dinophysis acuta, Dinophysis tripos, Dinophysis caudata, Prorocentrum lima, Pseudo-nitzschia australis, Pseudo-nitzschia calliantha, Pseudo-nitzschia fraudulenta, and Pseudo-nitzschia pungens. Lipophilic and hydrophilic toxins were detected in phytoplankton and mesozooplankton from both gulfs. Pseudo-nitzschia spp. were the toxigenic species most frequent in these gulfs. Consequently, domoic acid was the phycotoxin most abundantly detected and transferred to upper trophic levels. Spirolides were detected in phytoplankton and mesozooplankton for the first time in the study area. Likewise, dinophysistoxins were found in mesozooplankton from both gulfs, and this is the first report of the presence of these phycotoxins in zooplankton from the Argentine Sea. The dominance of calanoid copepods indicates that they were the primary vector of phycotoxins in the pelagic trophic web.
    Repository Name: EPIC Alfred Wegener Institut
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  • 59
    Publication Date: 2019-10-25
    Description: Climate warming in regions of ice‐rich permafrost can result in widespread thermokarst development, which reconfigures the landscape and damages infrastructure. We present multisite time series observations which couple ground temperature measurements with thermokarst development in a region of very cold permafrost. In the Canadian High Arctic between 2003 and 2016, a series of anomalously warm summers caused mean thawing indices to be 150–240% above the 1979–2000 normal resulting in up to 90 cm of subsidence over the 12‐year observation period. Our data illustrate that despite low mean annual ground temperatures, very cold permafrost (〈−10 °C) with massive ground ice close to the surface is highly vulnerable to rapid permafrost degradation and thermokarst development. We suggest that this is due to little thermal buffering from soil organic layers and near‐surface vegetation, and the presence of near‐surface ground ice. Observed maximum thaw depths at our sites are already exceeding those projected to occur by 2090 under representative concentration pathway version 4.5.
    Repository Name: EPIC Alfred Wegener Institut
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  • 60
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    Wiley
    In:  EPIC3Geophysical Research Letters, Wiley, (46), pp. 9474-9482, ISSN: 0094-8276
    Publication Date: 2019-10-02
    Description: In the South Atlantic, a reorganization of the Mid‐Atlantic Ridge began before anomaly C34n (83.6 Ma) and ended before anomaly C30n (66.4 Ma), complicating tectonics of Rio Grande Rise and older Walvis Ridge (WR), which formed together at the Mid‐Atlantic Ridge. This reorganization is poorly understood because magnetic anomalies C30n‐C34n are poorly defined near WR. We interpreted these anomalies along westernWRto improve knowledge of Rio Grande Rise‐WRtectonic development. Anomaly trends indicate that Valdivia Bank has an E‐W age progression, perpendicular to that predicted by hot spot models. Anomaly spacing and width is irregular and anomalous near WR, implying a series of ridge jumps and possibly a microplate between anomalies C34n and C32n. Eastward ridge jumps transferred microplate lithosphere to the South American plate. This study shows that Late Cretaceous tectonic evolution of the Rio Grande Rise‐WRlarge igneous provinces was more complex than previously understood.
    Repository Name: EPIC Alfred Wegener Institut
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  • 61
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    Wiley
    In:  EPIC3Geophysical Research Letters, Wiley, 46(14), pp. 8289-8299, ISSN: 0094-8276
    Publication Date: 2019-10-07
    Description: The last interglacial (LIG; Marine Isotope Substage 5e, ~127–117 ka) experienced globally warmer than modern temperatures; however, profound differences in regional climate occurred that are relevant to the assessment of future climate change scenarios. Tropical Atlantic sea surface temperature (SST) and hydrology are intrinsic to the spatiotemporal evolution of past and future climate. We present eight monthly resolved coral Sr/Ca and δ18O records (130–118 ka) to reconstruct mean western tropical Atlantic SST and seawater δ18O changes during the LIG. Cooler and fresher than modern surface waters are indicated for the middle of the LIG at ~126 ka. This was followed by a rapid transition to modern‐like SSTs and salinities that characterized the remaining part of the LIG. Our results, which account for differences found among corals, proxies, and SST calibration uncertainties, agree with western tropical Atlantic sediment records. Together, they suggest that an oceanic regime existed that differed from today.
    Repository Name: EPIC Alfred Wegener Institut
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  • 62
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    Wiley
    In:  EPIC3Geochemistry Geophysics Geosystems, Wiley, 20, ISSN: 1525-2027
    Publication Date: 2019-12-12
    Description: Ultraslow spreading ridges are poorly understood plate boundaries consisting of magmatic and amagmatic segments that expose mostly mantle peridotite and only traces of basalt and gabbro. The slowest part of the global spreading system is represented by the eastern Gakkel Ridge in the Central Arctic Ocean, where crustal accretion is characterized by extreme focusing of melt to discrete magmatic centers. Close to its eastern tip lies the unusual 5,310 m deep Gakkel Rift Deep (GRD) with limited sediment infill, which is in strong contrast to the broader sediment-filled rift valleys to the east and west. Here, we report an 40Ar/39Ar age of 3.65±0.01 Ma for a pillow basalt from a seamount located on the rim the GRD confirming ultraslow spreading rates of ~7 mm/yr close to the Laptev Sea as suggested from aeromagnetic data. Its geochemistry points to an alkaline lava, attributed to partial melting of a source that underwent prior geochemical enrichment. We note that the GRD extracts compositionally similar melts as the sparsely magmatic zone further west but at much slower spreading velocities of only ~6-7 mm/yr, indicating the widespread occurrence of similarly fertile mantle in the High Arctic. This enriched source differs from sub-continental lithospheric mantle that influences magmatism along the Western Volcanic Zone (Goldstein et al. 2008) and is similar to metasomatized mantle - shown to influence melt genesis along the Eastern Volcanic Zone.
    Repository Name: EPIC Alfred Wegener Institut
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  • 63
    Publication Date: 2019-11-25
    Description: The last extended time period when climate may have been warmer than today was during the Last Interglacial (LIG; ca. 129 to 120 thousand years ago). However, a global view of LIG precipitation is lacking. Here, seven new LIG climate models are compared to the first global database of proxies for LIG precipitation. In this way, models are assessed in their ability to capture important hydroclimatic processes during a different climate. The models can reproduce the proxy-based positive precipitation anomalies from the preindustrial period over much of the boreal continents. Over the Southern Hemisphere, proxy-model agreement is partial. In models, LIG boreal monsoons have 42% wider area than in the preindustrial and produce 55% more precipitation and 50% more extreme precipitation. Austral monsoons are weaker. The mechanisms behind these changes are consistent with stronger summer radiative forcing over boreal high latitudes and with the associated higher temperatures during the LIG.
    Repository Name: EPIC Alfred Wegener Institut
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  • 64
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    American Geophysical Union
    In:  EPIC3Paleoceanography and Paleoclimatology, American Geophysical Union
    Publication Date: 2020-05-14
    Repository Name: EPIC Alfred Wegener Institut
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  • 65
    Publication Date: 2019-11-18
    Repository Name: EPIC Alfred Wegener Institut
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  • 66
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    Wiley
    In:  EPIC3Geophysical Research Letters, Wiley, 46, ISSN: 0094-8276
    Publication Date: 2019-09-16
    Description: Coupled subseasonal forecast systems with dynamical sea ice have the potential of providing important predictive information in polar regions. Here, we evaluate the ability of operational ensemble prediction systems to predict the location of the sea ice edge in Antarctica. Compared to the Arctic, Antarctica shows on average a 30% lower skill, with only one system remaining more skillful than aclimatological benchmark up to ∼30 days ahead. Skill tends to be highest in the west Antarctic sectorduring the early freezing season. Most of the systems tend to overestimate the sea ice edge extent and fail to capture the onset of the melting season. All the forecast systems exhibit large initial errors. We conclude that subseasonal sea ice redictions could provide marginal support for decision-making only in selected seasons and regions of the Southern Ocean. However, major progress is possible through investments in model development, forecast initialization and calibration.
    Repository Name: EPIC Alfred Wegener Institut
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  • 67
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    MDPI
    In:  EPIC3Atmosphere, MDPI, 10(12), ISSN: 2073-4433
    Publication Date: 2020-04-14
    Description: The heat imbalance is the fundamental driver for the atmospheric circulation. Therefore, it is crucially important to understand how it responds to global warming. In this study, the role of the ocean in reshaping the atmospheric meridional heat imbalance is explored based on observations and climate simulations. We found that ocean tends to strengthen the meridional heat imbalance over the mid-latitudes. This is primarily because of the uneven ocean heat uptake between the subtropical and subpolar oceans. Under global warming, the subtropical ocean absorbs relatively less heat as the water there is well stratified. In contrast, the subpolar ocean is the primary region where the ocean heat uptake takes place, because the subpolar ocean is dominated by upwelling, strong mixing, and overturning circulation. We propose that the enhanced meridional heat imbalance may potentially contribute to strengthening the water cycle, westerlies, jet stream, and mid-latitude storms.
    Repository Name: EPIC Alfred Wegener Institut
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  • 68
    Publication Date: 2021-11-09
    Description: The Neotethyan oceanic Diamante-Terranova unit (DIATU; southern Apennines–Calabria–Peloritani Terrane system) includes basic rocks that during the Cenozoicwere subducted and metamorphosed to lawsonite-blueschist facies conditions.Petrological and structural observations (both at the meso- and micro-scale) showthat lawsonite growth was continuous during three distinctive ductile deformationstages (D1–D3).....
    Description: Published
    Description: 691-714
    Description: 3V. Proprietà chimico-fisiche dei magmi e dei prodotti vulcanici
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 69
    Publication Date: 2022-07-04
    Description: The Arctic is directly impacted by climate change. The increase in air temperature drives the thawing of permafrost and an increase in coastal erosion and river discharge. This leads to a greater input of sediment and organic matter into coastal waters, which substantially impacts the ecosystems, the subsistence economy of the local population, and the climate because of the transformation of organic matter into greenhouse gases. Yet, the patterns of sediment dispersal in the nearshore zone are not well known, because ships do not often reach shallow waters and satellite remote sensing is traditionally focused on less dynamic environments. The goal of this study is to use the extensive Landsat archive to investigate sediment dispersal patterns specifically on an exemplary Arctic nearshore environment, where field measurements are often scarce. Multiple Landsat scenes were combined to calculate means of sediment dispersal and sea surface temperature under changing seasonal wind conditions in the nearshore zone of Herschel Island Qikiqtaruk in the western Canadian Arctic since 1982. We use observations in the Landsat red and thermal wavebands, as well as a recently published water turbidity algorithm to relate archive wind data to turbidity and sea surface temperature. We map the spatial patterns of turbidity and water temperature at high spatial resolution in order to resolve transport pathways of water and sediment at the water surface. Our results show that these pathways are clearly related to the prevailing wind conditions, being ESE and NW. During easterly wind conditions, both turbidity and water temperature are significantly higher in the nearshore area. The extent of the Mackenzie River plume and coastal erosion are the main explanatory variables for sediment dispersal and sea surface temperature distributions in the study area. During northwesterly wind conditions, the influence of the Mackenzie River plume is negligible. Our results highlight the potential of high spatial resolution Landsat imagery to detect small-scale hydrodynamic processes, but also show the need to specifically tune optical models for Arctic nearshore environments.
    Repository Name: EPIC Alfred Wegener Institut
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  • 70
    Publication Date: 2022-06-20
    Description: Time-variable gravity measurements from the Gravity Recovery and Climate Experiment (GRACE) and GRACE-Follow On (GRACE-FO) missions and satellite altimetry measurements from CryoSat-2 enable independent mass balance estimates of the Earth’s glaciers and ice sheets. Both approaches vary in terms of their retrieval principles and signal-to-noise characteristics. GRACE/GRACE-FO recovers the gravity disturbance caused by changes in the mass of the entire ice sheet with a spatial resolution of 300 to 400 km. In contrast, CryoSat-2measures travel times of a radar signal reflected close to the ice sheet surface, allowing changes of the surface topography to be determined with about 5 km spatial resolution. Here, we present a method to combine observations from the both sensors, taking into account the different signal and noise characteristics of each satellite observation that are dependent on the spatial wavelength. We include uncertainties introduced by the processing and corrections, such as the choice of the re-tracking algorithm and the snow/ice volume density model for CryoSat-2, or the filtering of correlated errors and the correction for glacial-isostatic adjustment (GIA) for GRACE. We apply our method to the Antarctic ice sheet and the time period 2011–2017, in which GRACE and CryoSat-2 were simultaneously operational, obtaining a total ice mass loss of 178 ± 23 Gt yr−1. We present a map of the rate of mass change with a spatial resolution of 40 km that is evaluable across all spatial scales, and more precise than estimates based on a single satellite mission.
    Repository Name: EPIC Alfred Wegener Institut
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  • 71
    Publication Date: 2022-05-06
    Description: This work focuses on the study of land subsidence processes by means of multi-temporal and multi-frequency InSAR techniques. Specifically, we retrieve the long-term evolution (2003–2018) of the creeping phenomenon producing ground fissuring in the Ciudad Guzmán (Jalisco state, Mexico) urban area. The city is located on the northern side of the Volcan de Colima area, one of the most active Mexican volcanoes. On September 21 2012, Ciudad Guzmán was struck by ground fissures of about 1.5 km of length, causing the deformation of the roads and the propagation of fissures in adjacent buildings. The field surveys showed that fissures follow the escarpments produced during the central Mexico September 19 1985 Mw 8.1 earthquake. We extended the SAR (Synthetic Aperture Radar) interferometric monitoring starting with the multi-temporal analysis of ENVISAT and COSMO-SkyMed datasets, allowing the monitoring of the observed subsidence phenomena a ecting the Mexican city. We processed a new stack of Sentinel-1 TOPSAR acquisition mode images along both descending and ascending paths and spanning the 2016–2018 temporal period. The resulting long-term trend observed by satellites, together with data from volcanic bulletin and in situ surveys, seems to suggest that the subsidence is due to the exploitation of the aquifers and that the spatial arrangement of ground deformation is controlled by the position of buried faults.
    Description: Published
    Description: id 2246
    Description: 2T. Deformazione crostale attiva
    Description: JCR Journal
    Keywords: subsidence ; multi-temporal analysis ; PS ; SBAS ; InSAR ; urban monitoring ; buried faults
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 72
    Publication Date: 2022-08-31
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geochemistry, Geophysics, Geosystems 19(11), (2018): 4218-4235. doi: 10.1029/2018GC007654
    Description: Hydrocarbon migration and emplacement processes remain underconstrained despite the vast potential economic value associated with oil and gas. Noble gases provide information about hydrocarbon generation, fluid migration pathways, reservoir conditions, and the relative volumes of oil versus water in the subsurface. Produced gas He‐Ne‐Ar‐Kr‐Xe data from two distinct oil fields in the Gulf of Mexico (Genesis and Hoover‐Diana) are used to calibrate a model that takes into account both water‐oil solubility exchange and subsequent gas cap formation. Reconstructed noble gas signatures in oils reflect simple (two‐phase) oil‐water exchange imparted during migration from the source rock to the trap, which are subsequently modified by gas cap formation at current reservoir conditions. Calculated, oil to water volume ratios (Vo/Vw) in Tertiary‐sourced oils from the Hoover‐Diana system are 2–3 times greater on average than those in the Jurassic sourced oils from the Genesis reservoirs. Higher Vo/Vw in Hoover‐Diana versus Genesis can be interpreted in two ways: either (1) the Hoover reservoir interval has 2–3 times more oil than any of the individual Genesis reservoirs, which is consistent with independent estimates of oil in place for the respective reservoirs, or (2) Genesis oils have experienced longer migration pathways than Hoover‐Diana oils and thus have interacted with more water. The ability to determine a robust Vo/Vw, despite gas cap formation and possible gas cap loss, is extremely powerful. For example, when volumetric hydrocarbon ratios are combined with independent estimates of hydrocarbon migration distance and/or formation fluid volumes, this technique has the potential to differentiate between large and small oil accumulations.
    Description: We thank ExxonMobil for funding and providing the samples. In addition, we thank James Scott and two anonymous reviewers for their comprehensive and constructive reviews, as well as Janne Blichert‐Toft for editorial handling.
    Description: 2019-04-10
    Repository Name: Woods Hole Open Access Server
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  • 73
    Publication Date: 2022-10-27
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geochemistry Geophysics Geosystems 20(5), (2019):2462-2472, doi:10.1029/2019GC008250.
    Description: Methane hydrate occurs naturally under pressure and temperature conditions that are not straightforward to replicate experimentally. Xenon has emerged as an attractive laboratory alternative to methane for studying hydrate formation and dissociation in multiphase systems, given that it forms hydrates under milder conditions. However, building reliable analogies between the two hydrates requires systematic comparisons, which are currently lacking. We address this gap by developing a theoretical and computational model of gas hydrates under equilibrium and nonequilibrium conditions. We first compare equilibrium phase behaviors of the Xe·H2O and CH4·H2O systems by calculating their isobaric phase diagram, and then study the nonequilibrium kinetics of interfacial hydrate growth using a phase field model. Our results show that Xe·H2O is a good experimental analog to CH4·H2O, but there are key differences to consider. In particular, the aqueous solubility of xenon is altered by the presence of hydrate, similar to what is observed for methane; but xenon is consistently less soluble than methane. Xenon hydrate has a wider nonstoichiometry region, which could lead to a thicker hydrate layer at the gas‐liquid interface when grown under similar kinetic forcing conditions. For both systems, our numerical calculations reveal that hydrate nonstoichiometry coupled with hydrate formation dynamics leads to a compositional gradient across the hydrate layer, where the stoichiometric ratio increases from the gas‐facing side to the liquid‐facing side. Our analysis suggests that accurate composition measurements could be used to infer the kinetic history of hydrate formation in natural settings where gas is abundant.
    Description: This work was funded in part by the U.S. Department of Energy, DOE [awards DE‐FE0013999 and DE‐SC0018357 (to R. J.) and DOE Interagency Agreement DE‐FE0023495 (to W. F. W.)]. X. F. acknowledges support by the Miller Research Fellowship at the University of California Berkeley. W. F. W. acknowledges support from the U.S. Geological Survey's Gas Hydrate Project and the Survey's Coastal, Marine Hazards and Resources Program. L. C. F. acknowledges funding from the Spanish Ministry of Economy and Competitiveness (grants RYC‐2012‐11704 and CTM2014‐54312‐P). L. C. F. and R. J. acknowledge funding from the MIT International Science and Technology Initiatives, through a Seed Fund grant. The simulation data are available on the UC Berkeley Dash repository at https://doi.org/10.6078/D1G67B.
    Description: 2019-11-06
    Keywords: Methane hydrates ; Xenon hydrates ; Phase behavior ; Growth kinetics ; Nonstoichiometry
    Repository Name: Woods Hole Open Access Server
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  • 74
    Publication Date: 2022-10-27
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Biogeosciences, 124(6), (2019): 1591-1603, doi:10.1029/2018JG004803.
    Description: Tropical dry forests in eastern and southern Africa cover 2.5 × 106 km2, support wildlife habitat and livelihoods of more than 150 million people, and face threats from land use and climate change. To inform conservation, we need better understanding of ecosystem processes like nutrient cycling that regulate forest productivity and biomass accumulation. Here we report on patterns in nitrogen (N) cycling across a 100‐year forest regrowth chronosequence in the Tanzanian Miombo woodlands. Soil and vegetation indicators showed that low ecosystem N availability for trees persisted across young to mature forests. Ammonium dominated soil mineral N pools from 0‐ to 15‐cm depth. Laboratory‐measured soil N mineralization rates across 3‐ to 40‐year regrowth sites showed no significant trends and were lower than mature forest rates. Aboveground tree N pools increased at 6 to 7 kg N·ha−1·yr−1, accounting for the majority of ecosystem N accumulation. Foliar δ15N 〈0‰ in an N‐fixing canopy tree across all sites suggested that N fixation may contribute to ecosystem N cycle recovery. These results contrast N cycling in wetter tropical and Neotropical dry forests, where indicators of N scarcity diminish after several decades of regrowth. Our findings suggest that minimizing woody biomass removal, litter layer, and topsoil disturbance may be important to promote N cycle recovery and natural regeneration in Miombo woodlands. Higher rates of N mineralization in the wet season indicated a potential that climate change‐altered rainfall leading to extended dry periods may lower N availability through soil moisture‐dependent N mineralization pathways, particularly for mature forests.
    Description: This study depended on the knowledge, insights, and cooperation of many people and institutions. We thank the Millennium Villages Project‐Mbola site for providing introductions to the landscape and village headmen in many regions. We thank the ARI‐Tumbi staff (now TARI‐Tumbi) in Tabora, Tanzania for providing invaluable logistical support in identifying forest regrowth sites and help with labwork in Tabora, Tanzania. We thank other key local organizations, including Tabora Development Foundation Trust (Dick Mlimuka, Oscar Kisanji) and Tanzania Forest Service (Bw. Relingo), for logistical support and transportation. We thank many village headmen and farmers for access to forest sites within their lands for sampling. Finally, we would like to thank the MBL Stable Isotope laboratory and Dr. Marshall Otter for his expertise with producing and interpreting soil and leaf C, N and stable isotope data. This study was funded in part by NSF PIRE Grant OISE 0968211, a Dissertation Support Grant to Marc Mayes from Brown University (2015–2016), and completed with permission and cooperation from the Tanzania Commission on Science and Technology (COSTECH permits 2013‐261‐NA‐2014‐199 and 2015‐183‐ER‐2014‐199). Data and code for analyses can be accessed at a Github repository: https://github.com/mtm17/MiomboN.git.
    Description: 2019-11-08
    Keywords: Nitrogen ; Africa ; Miombo ; Tropical dry forest ; Carbon ; Secondary forest regrowth
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  • 75
    Publication Date: 2022-10-27
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Farris, A. S., Defne, Z., & Ganju, N. K. Identifying salt marsh shorelines from remotely sensed elevation data and imagery. Remote Sensing, 11(15), (2019): 1795, doi: 10.3390/rs11151795.
    Description: Salt marshes are valuable ecosystems that are vulnerable to lateral erosion, submergence, and internal disintegration due to sea level rise, storms, and sediment deficits. Because many salt marshes are losing area in response to these factors, it is important to monitor their lateral extent at high resolution over multiple timescales. In this study we describe two methods to calculate the location of the salt marsh shoreline. The marsh edge from elevation data (MEED) method uses remotely sensed elevation data to calculate an objective proxy for the shoreline of a salt marsh. This proxy is the abrupt change in elevation that usually characterizes the seaward edge of a salt marsh, designated the “marsh scarp.” It is detected as the maximum slope along a cross-shore transect between mean high water and mean tide level. The method was tested using lidar topobathymetric and photogrammetric elevation data from Massachusetts, USA. The other method to calculate the salt marsh shoreline is the marsh edge by image processing (MEIP) method which finds the unvegetated/vegetated line. This method applies image classification techniques to multispectral imagery and elevation datasets for edge detection. The method was tested using aerial imagery and coastal elevation data from the Plum Island Estuary in Massachusetts, USA. Both methods calculate a line that closely follows the edge of vegetation seen in imagery. The two methods were compared to each other using high resolution unmanned aircraft systems (UAS) data, and to a heads-up digitized shoreline. The root-mean-square deviation was 0.6 meters between the two methods, and less than 0.43 meters from the digitized shoreline. The MEIP method was also applied to a lower resolution dataset to investigate the effect of horizontal resolution on the results. Both methods provide an accurate, efficient, and objective way to track salt marsh shorelines with spatially intensive data over large spatial scales, which is necessary to evaluate geomorphic change and wetland vulnerability.
    Description: This project was supported by the U.S. Geological Survey (USGS) Coastal/Marine Natural Hazards and Resources Program as well as the Massachusetts O ce of Coastal Zone Management under interagency agreement 16ENMALQ006000.
    Keywords: Marsh edge ; Marsh shoreline ; Unmanned aircraft system ; UAS ; UAV ; Drone ; Lidar ; Salt marsh ; Coastal wetlands ; Plum Island
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  • 76
    Publication Date: 2022-05-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in [citation], doi:[doi]. Johnson, W. M., Longnecker, K., Soule, M. C. K., Arnold, W. A., Bhatia, M. P., Hallam, S. J., Van Mooy, B. A. S., & Kujawinski, E. B. Metabolite composition of sinking particles differs from surface suspended particles across a latitudinal transect in the South Atlantic. Limnology and Oceanography, (2019), doi:10.1002/lno.11255.
    Description: Marine sinking particles transport carbon from the surface and bury it in deep‐sea sediments, where it can be sequestered on geologic time scales. The combination of the surface ocean food web that produces these particles and the particle‐associated microbial community that degrades them creates a complex set of variables that control organic matter cycling. We use targeted metabolomics to characterize a suite of small biomolecules, or metabolites, in sinking particles and compare their metabolite composition to that of the suspended particles in the euphotic zone from which they are likely derived. These samples were collected in the South Atlantic subtropical gyre, as well as in the equatorial Atlantic region and the Amazon River plume. The composition of targeted metabolites in the sinking particles was relatively similar throughout the transect, despite the distinct oceanic regions in which they were generated. Metabolites possibly derived from the degradation of nucleic acids and lipids, such as xanthine and glycine betaine, were an increased mole fraction of the targeted metabolites in the sinking particles relative to surface suspended particles, while algal‐derived metabolites like the osmolyte dimethylsulfoniopropionate were a smaller fraction of the observed metabolites on the sinking particles. These compositional changes are shaped both by the removal of metabolites associated with detritus delivered from the surface ocean and by production of metabolites by the sinking particle‐associated microbial communities. Furthermore, they provide a basis for examining the types and quantities of metabolites that may be delivered to the deep sea by sinking particles.
    Description: The authors would like to thank the captain and crew of the R/V Knorr and R/V Atlantic Explorer, as well as Justin Ossolinski, Catherine Carmichael, and Sean Sylva for helping to make this data set possible. Special thanks to Colleen Durkin for sharing her data and providing feedback on the manuscript. Funding for this work came from the National Science Foundation (NSF Grant OCE‐1154320 to EBK and KL) and a WHOI Ocean Ventures Fund award to WMJ. The instruments in the WHOI FT‐MS Facility were purchased with support from the Gordon & Betty Moore Foundation and NSF. Support for WMJ was provided by a National Defense Science and Engineering Fellowship. Sequencing was performed under the auspices of the US Department of Energy (DOE) JGI Community Science Program (CSP) project (CSP 1685) supported by the Office of Science of US DOE Contract DE‐AC02‐ 05CH11231. Additional work related to sample collection and processing was supported by the G. Unger Vetlesen and Ambrose Monell Foundations, the Natural Sciences and Engineering Research Council of Canada (NSERC), the Canadian Institute for Advanced Study (CIFAR), and the Canada Foundation for Innovation through grants awarded to SJH. MPB was supported by a CIFAR Global Scholarship and NSERC postdoctoral fellowship.
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  • 77
    Publication Date: 2022-05-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Long, M. H., Sutherland, K., Wankel, S. D., Burdige, D. J., & Zimmerman, R. C. Ebullition of oxygen from seagrasses under supersaturated conditions. Limnology and Oceanography, (2019), doi:10.1002/lno.11299.
    Description: Gas ebullition from aquatic systems to the atmosphere represents a potentially important fraction of primary production that goes unquantified by measurements of dissolved gas concentrations. Although gas ebullition from photosynthetic surfaces has often been observed, it is rarely quantified. The resulting underestimation of photosynthetic activity may significantly bias the determination of ecosystem trophic status and estimated rates of biogeochemical cycling from in situ measures of dissolved oxygen. Here, we quantified gas ebullition rates in Zostera marina meadows in Virginia, U.S.A. using simple funnel traps and analyzed the oxygen concentration and isotopic composition of the captured gas. Maximum hourly rates of oxygen ebullition (3.0 mmol oxygen m−2 h−1) were observed during the coincidence of high irradiance and low tides, particularly in the afternoon when oxygen and temperature maxima occurred. The daily ebullition fluxes (up to 11 mmol oxygen m−2 d−1) were roughly equivalent to net primary production rates determined from dissolved oxygen measurements indicating that bubble ebullition can represent a major component of primary production that is not commonly included in ecosystem‐scale estimates. Oxygen content comprised 20–40% of the captured bubble gas volume and correlated negatively with its δ18O values, consistent with a predominance of mixing between the higher δ18O of atmospheric oxygen in equilibrium with seawater and the lower δ18O of oxygen derived from photosynthesis. Thus, future studies interested in the metabolism of highly productive, shallow water ecosystems, and particularly those measuring in situ oxygen flux, should not ignore the bubble formation and ebullition processes described here.
    Description: Two anonymous reviewers provided thoughtful contributions that improved this manuscript. We thank Miraflor Santos, Victoria Hill, David Ruble, Jeremy Bleakney, and Brian Collister for assistance in the field and the staff of the Anheuser‐Busch Coastal Research Center for logistical support. This work was supported by NSF OCE grants 1633951 (to MHL) and 1635403 (to RCZ and DJB), NASA Fellowship NESSF NNX15AR62H (to KS), and a fellowship from the Hansewissenschaftskolleg (Institute for Advanced Studies; to SDW).
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  • 78
    Publication Date: 2022-05-26
    Description: The cumulative Greenland freshwater flux anomaly has exceeded 5,000 km3 since the 1990s. The volume of this surplus freshwater is expected to cause substantial freshening in the North Atlantic. Analysis of hydrographic observations in the subpolar seas reveals freshening signals in the 2010s. The sources of this freshening are yet to be determined. In this study, the relationship between the surplus Greenland freshwater flux and this freshening is tested by analyzing the propagation of the Greenland freshwater anomaly and its impact on salinity in the subpolar North Atlantic based on observational data and numerical experiments with and without the Greenland runoff. A passive tracer is continuously released during the simulations at freshwater sources along the coast of Greenland to track the Greenland freshwater anomaly. Tracer budget analysis shows that 44% of the volume of the Greenland freshwater anomaly is retained in the subpolar North Atlantic by the end of the simulation. This volume is sufficient to cause strong freshening in the subpolar seas if it stays in the upper 50–100 m. However, in the model the anomaly is mixed down to several hundred meters of the water column resulting in smaller magnitudes of freshening compared to the observations. Therefore, the simulations suggest that the accelerated Greenland melting would not be sufficient to cause the observed freshening in the subpolar seas and other sources of freshwater have contributed to the freshening. Impacts on salinity in the subpolar seas of the freshwater transport through Fram Strait and precipitation are discussed.
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Dukhovskoy, D. S., Yashayaev, I., Proshutinsky, A., Bamber, J. L., Bashmachnikov, I. L., Chassignet, E. P., Lee, C. M., & Tedstone, A. J. Role of Greenland freshwater anomaly in the recent freshening of the subpolar North Atlantic. Journal of Geophysical Research-Oceans, 124(5), (2019): 3333-3360, doi:10.1029/2018JC014686.
    Keywords: Greenland ice sheet melting ; freshwater anomaly ; subpolar North Atlantic ; subpolar gyre ; passive tracer numerical experiment ; freshwater budget
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  • 79
    Publication Date: 2022-05-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(7), (2019): 4416-4432, doi: 10.1029/2019JC015185.
    Description: Synoptic and historical shipboard data, spanning the period 1981–2017, are used to investigate the seasonal evolution of water masses on the northeastern Chukchi shelf and quantify the circulation patterns and their impact on nutrient distributions. We find that Alaskan coastal water extends to Barrow Canyon along the coastal pathway, with peak presence in September, while the Pacific Winter Water (WW) continually drains off the shelf through the summer. The depth‐averaged circulation under light winds is characterized by a strong Alaskan Coastal Current (ACC) and northward flow through Central Channel. A portion of the Central Channel flow recirculates anticyclonically to join the ACC, while the remainder progresses northeastward to Hanna Shoal where it bifurcates around both sides of the shoal. All of the branches converge southeast of the shoal and eventually join the ACC. The wind‐forced response has two regimes: In the coastal region the circulation depends on wind direction, while on the interior shelf the circulation is sensitive to wind stress curl. In the most common wind‐forced state—northeasterly winds and anticyclonic wind stress curl—the ACC reverses, the Central Channel flow penetrates farther north, and there is mass exchange between the interior and coastal regions. In September and October, the region southeast of Hanna Shoal is characterized by elevated amounts of WW, a shallower pycnocline, and higher concentrations of nitrate. Sustained late‐season phytoplankton growth spurred by this pooling of nutrients could result in enhanced vertical export of carbon to the seafloor, contributing to the maintenance of benthic hotspots in this region.
    Description: The authors acknowledge the hard work and dedication of the many crew members who sailed on the different cruises of the USCGC Healy and the R/V Palmer. This study would not have been possible without their ongoing efforts to carry out successful science operations. Seth Danielson performed the quality control of the Barrow wind data. Funding was provided by the following sources: National Oceanic and Atmospheric Administration (NOAA) Grant NA14‐OAR4320158 (P. L., R. P., and L. M.), National Science Foundation (NSF) Grants OPP‐1702371 and OPP‐1733564 (R. P. and F. B.) and PLR‐1303617 (R. P., K. A., and K. L.), NSF Graduate Research Fellowship Program DGE‐0645962 (K. L.), National Aeronautics and Space Administration award NNX10AF42G (R. P., K. A., and K. L.), and NOAA's Ocean Observing and Monitoring Division, Climate Program Office Fund 100007298 (C. M.). This publication is partially funded by the Joint Institute for the Study of the Atmosphere and Ocean (JISAO) under NOAA Cooperative Agreement NA15OAR4320063 and is contribution EcoFOCI‐0924 to the Ecosystems and Fisheries‐Oceanography Coordinated Investigations, 4944 to PMEL. The CTD and shipboard ADCP data of the eight cruises are available from http://www.rvdata.us/, and the nutrients data can be accessed from https://arcticdata.io/.
    Description: 2019-12-07
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  • 80
    Publication Date: 2022-10-27
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Costello, J. H., Colin, S. P., Gemmell, B. J., & Dabiri, J. O. Hydrodynamics of vortex generation during bell contraction by the hydromedusa Eutonina indicans (Romanes, 1876). Biomimetics, 4(3), (2019): 44, doi:10.3390/biomimetics4030044.
    Description: Swimming bell kinematics and hydrodynamic wake structures were documented during multiple pulsation cycles of a Eutonina indicans (Romanes, 1876) medusa swimming in a predominantly linear path. Bell contractions produced pairs of vortex rings with opposite rotational sense. Analyses of the momentum flux in these wake structures demonstrated that vortex dynamics related directly to variations in the medusa swimming speed. Furthermore, a bulk of the momentum flux in the wake was concentrated spatially at the interfaces between oppositely rotating vortices rings. Similar thrust-producing wake structures have been described in models of fish swimming, which posit vortex rings as vehicles for energy transport from locations of body bending to regions where interacting pairs of opposite-sign vortex rings accelerate the flow into linear propulsive jets. These findings support efforts toward soft robotic biomimetic propulsion
    Description: This research was supported by awards from the National Science Foundation (1536672, 1511721 to J.H.C.; 1536688, 1510929 to S.P.C., 1511996 to B.J.G. and 1511333 to J.O.D.).
    Keywords: Swimming ; Vortex rings ; Wakes
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  • 81
    Publication Date: 2022-10-27
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(6), (2019): 3490-3507, doi:10.1029/2018JC014675.
    Description: Offshore permafrost plays a role in the global climate system, but observations of permafrost thickness, state, and composition are limited to specific regions. The current global permafrost map shows potential offshore permafrost distribution based on bathymetry and global sea level rise. As a first‐order estimate, we employ a heat transfer model to calculate the subsurface temperature field. Our model uses dynamic upper boundary conditions that synthesize Earth System Model air temperature, ice mass distribution and thickness, and global sea level reconstruction and applies globally distributed geothermal heat flux as a lower boundary condition. Sea level reconstruction accounts for differences between marine and terrestrial sedimentation history. Sediment composition and pore water salinity are integrated in the model. Model runs for 450 ka for cross‐shelf transects were used to initialize the model for circumarctic modeling for the past 50 ka. Preindustrial submarine permafrost (i.e., cryotic sediment), modeled at 12.5‐km spatial resolution, lies beneath almost 2.5 ×106km2 of the Arctic shelf. Our simple modeling approach results in estimates of distribution of cryotic sediment that are similar to the current global map and recent seismically delineated permafrost distributions for the Beaufort and Kara seas, suggesting that sea level is a first‐order determinant for submarine permafrost distribution. Ice content and sediment thermal conductivity are also important for determining rates of permafrost thickness change. The model provides a consistent circumarctic approach to map submarine permafrost and to estimate the dynamics of permafrost in the past.
    Description: Boundary condition data are available online via the sources referenced in the manuscript. This work was partially funded by a Helmholtz Association of Research Centres (HGF) Joint Russian‐German Research Group (HGF JRG 100). This study is part of a project that has received funding from the European Unions Horizon 2020 research and innovation program under grant agreement 773421. Submarine permafrost studies in the Kara and Laptev Seas were supported by Russian Foundation for Basic Research (RFBR/RFFI) grants 18‐05‐60004 and 18‐05‐70091, respectively. The International Permafrost Association (IPA) and the Association for Polar Early Career Scientists (APECS) supported research coordination that led to this study. We acknowledge coordination support of the World Climate Research Programme (WCRP) through their core project on Climate and Cryosphere (CliC). Thanks to Martin Jakobsson for providing a digitized version of the preliminary IHO delineation of the Arctic seas and to Guy Masters for access to the observational geothermal database. Any use of trade, firm, or product names is for descriptive purposes only and does not imply endorsement by the U.S. Government.
    Description: 2019-10-17
    Keywords: Submarine permafrost ; Arctic ; Cryosphere ; Sea level
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  • 82
    Publication Date: 2022-10-27
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Estrada-Gomez, S., Caldas Cardoso, F., Johana Vargas-Munoz, L., Carlos Quintana-Castillo, J., Arenas Gomez, C. M., Steffany Pineda, S., & Maria Saldarriaga-Cordoba, M. Venomic, transcriptomic, and bioactivity analyses of Pamphobeteus verdolaga venom reveal complex disulfide-rich peptides that modulate calcium channels. Toxins, 11(9), (2019): 496, doi:10.3390/toxins11090496.
    Description: Pamphobeteus verdolaga is a recently described Theraphosidae spider from the Andean region of Colombia. Previous reports partially characterized its venom profile. In this study, we conducted a detailed analysis that includes reversed-phase high-performance liquid chromatography (rp-HPLC), calcium influx assays, tandem mass spectrometry analysis (tMS/MS), and venom-gland transcriptome. rp-HPLC fractions of P. verdolaga venom showed activity on CaV2.2, CaV3.2, and NaV1.7 ion channels. Active fractions contained several peptides with molecular masses ranging from 3399.4 to 3839.6 Da. The tMS/MS analysis of active fraction displaying the strongest activity to inhibit calcium channels showed sequence fragments similar to one of the translated transcripts detected in the venom-gland transcriptome. The putative peptide of this translated transcript corresponded to a toxin, here named ω-theraphositoxin-Pv3a, a potential ion channel modulator toxin that is, in addition, very similar to other theraphositoxins affecting calcium channels (i.e., ω-theraphotoxin-Asp1a). Additionally, using this holistic approach, we found that P. verdolaga venom is an important source of disulfide-rich proteins expressing at least eight superfamilies.
    Keywords: Theraphosidae ; Pamphobeteus ; Peptides ; Disulfide-rich peptide (DRP) ; Inhibitory cysteine knot (ICK) ; Venomics ; Transcriptome ; Ion channels
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  • 83
    Publication Date: 2022-10-27
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Boss, E., Sherwood, C. R., Hill, P., & Milligan, T. Advantages and limitations to the use of optical measurements to study sediment properties. Applied Sciences-Basel, 8(12), (2018):2692, doi:10.3390/app8122692.
    Description: Measurements of optical properties have been used for decades to study particle distributions in the ocean. They are useful for estimating suspended mass concentration as well as particle-related properties such as size, composition, packing (particle porosity or density), and settling velocity. Measurements of optical properties are, however, biased, as certain particles, because of their size, composition, shape, or packing, contribute to a specific property more than others. Here, we study this issue both theoretically and practically, and we examine different optical properties collected simultaneously in a bottom boundary layer to highlight the utility of such measurements. We show that the biases we are likely to encounter using different optical properties can aid our studies of suspended sediment. In particular, we investigate inferences of settling velocity from vertical profiles of optical measurements, finding that the effects of aggregation dynamics can seldom be ignored.
    Description: This work was supported by the Office of Naval Research and the United States Geological Survey Coastal and Marine Geology Program. The unique instrument platform and data acquisition system was designed and built by technical staff lead by Marinna Martini at the United States Geological Survey Woods Hole Coastal and Marine Science Center. This team was also responsible for deployment and recovery of the instrumentation. We thank the Woods Hole Oceanographic Institution (WHOI) MVCO staff for support during this experiment, and we thank the captains and crews of the R/V Connecticut and the R/V Tioga. Any use of trade, product, or firm names is for descriptive purposes only and does not imply endorsement by the United States Government. This paper has benefited significantly from insightful comments from D. Stramski, A. Aretxabaleta and two anonymous reviewers.
    Keywords: Particle dynamics ; Optical properties ; Suspended sediment
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  • 84
    Publication Date: 2022-10-27
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Signell, R. P., & Pothina, D. Analysis and visualization of coastal ocean model data in the cloud. Journal of Marine Science and Engineering, 7(4), (2019);110, doi:10.3390/jmse7040110.
    Description: The traditional flow of coastal ocean model data is from High-Performance Computing (HPC) centers to the local desktop, or to a file server where just the needed data can be extracted via services such as OPeNDAP. Analysis and visualization are then conducted using local hardware and software. This requires moving large amounts of data across the internet as well as acquiring and maintaining local hardware, software, and support personnel. Further, as data sets increase in size, the traditional workflow may not be scalable. Alternatively, recent advances make it possible to move data from HPC to the Cloud and perform interactive, scalable, data-proximate analysis and visualization, with simply a web browser user interface. We use the framework advanced by the NSF-funded Pangeo project, a free, open-source Python system which provides multi-user login via JupyterHub and parallel analysis via Dask, both running in Docker containers orchestrated by Kubernetes. Data are stored in the Zarr format, a Cloud-friendly n-dimensional array format that allows performant extraction of data by anyone without relying on data services like OPeNDAP. Interactive visual exploration of data on complex, large model grids is made possible by new tools in the Python PyViz ecosystem, which can render maps at screen resolution, dynamically updating on pan and zoom operations. Two examples are given: (1) Calculating the maximum water level at each grid cell from a 53-GB, 720-time-step, 9-million-node triangular mesh ADCIRC simulation of Hurricane Ike; (2) Creating a dashboard for visualizing data from a curvilinear orthogonal COAWST/ROMS forecast model.
    Description: This research benefited from National Science Foundation grant number 1740648, and EarthSim project was funded by ERDC projects PETTT BY17-094SP and PETTT BY16-091SP. This project also benefited from research credits granted by Amazon.
    Keywords: Ocean modeling ; Cloud computing ; Data analysis ; Geospatial data visualization
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  • 85
    Publication Date: 2022-10-27
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Goodwin, J. D., Munroe, D. M., Defne, Z., Ganju, N. K., & Vasslides, J. Estimating connectivity of hard clam (Mercenaria mercenaria) and eastern oyster (Crassostrea virginica) larvae in Barnegat Bay. Journal of Marine Science and Engineering, 7(6), (2019): 167, doi:10.3390/jmse7060167.
    Description: Many marine organisms have a well-known adult sessile stage. Unfortunately, our lack of knowledge regarding their larval transient stage hinders our understanding of their basic ecology and connectivity. Larvae can have swimming behavior that influences their transport within the marine environment. Understanding the larval stage provides insight into population connectivity that can help strategically identify areas for restoration. Current techniques for understanding the larval stage include modeling that combines particle attributes (e.g., larval behavior) with physical processes of water movement to contribute to our understanding of connectivity trends. This study builds on those methods by using a previously developed retention clock matrix (RCM) to illustrate time dependent connectivity of two species of shellfish between areas and over a range of larval durations. The RCM was previously used on physical parameters but we expand the concept by applying it to biology. A new metric, difference RCM (DRCM), is introduced to quantify changes in connectivity under different scenarios. Broad spatial trends were similar for all behavior types with a general south to north progression of particles. The DRCMs illustrate differences between neutral particles and those with behavior in northern regions where stratification was higher, indicating that larval behavior influenced transport. Based on these findings, particle behavior led to small differences (north to south movement) in transport patterns in areas with higher salinity gradients (the northern part of the system) compared to neutral particles. Overall, the dominant direction for particle movement was from south to north, which at times was enhanced by winds from the south. Clam and oyster restoration in the southern portion of Barnegat Bay could serve as a larval supply for populations in the north. These model results show that coupled hydrodynamic and particle tracking models have implications for fisheries management and restoration activities.
    Description: This work is supported by the Barnegat Bay Partnership EPA grants CE98212311, CE98212312. We extend our deep thanks to anonymous reviewers and Lisa Lucas who provided thoughtful input that improved the manuscript. We thank Matthew Kozak and Ian Mitchell for technical advice and Elizabeth North for LTRANS guidance. Joe Caracapa and Jennifer Gius provided help running remote simulations. COAST model source code is available at https://code.usgs.gov/coawstmodel/COAWST [50]. The hydrodynamic model outoput is available at: http://geoport.whoi.edu/thredds/catalog/clay/usgs/users/zdefne/GRL/catalog.html [21] and particle tracking model outputs are available from the corresponding author upon request.
    Keywords: Bivalve connectivity ; Larval transport ; Modeling ; Retention clock ; RCM ; ROMS ; LTRANS ; Barnegat Bay ; Hard clam ; Eastern oyster
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  • 86
    Publication Date: 2022-10-27
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 46 (2019): 10484–10494, doi:10.1029/2019GL083719.
    Description: Tropical cyclones (hurricanes) generate intense surface ocean cooling and vertical mixing resulting in nutrient upwelling into the photic zone and episodic phytoplankton blooms. However, their influence on the deep ocean remains unknown. Here we present evidence that hurricanes also impact the ocean's biological pump by enhancing export of labile organic material to the deep ocean. In October 2016, Category 3 Hurricane Nicole passed over the Bermuda Time Series site in the oligotrophic NW Atlantic Ocean. Following Nicole's passage, particulate fluxes of lipids diagnostic of fresh phytodetritus, zooplankton, and microbial biomass increased by 30–300% at 1,500 m depth and 30–800% at 3,200 m depth. Mesopelagic suspended particles following Nicole were also enriched in phytodetrital material and in zooplankton and bacteria lipids, indicating particle disaggregation and a deepwater ecosystem response. Predicted climate‐induced increases in hurricane frequency and/or intensity may significantly alter ocean biogeochemical cycles by increasing the strength of the biological pump.
    Description: This work and the Oceanic Flux Program time series were supported by the National Science Foundation Chemical Oceanography Program Grant OCE 1536644. The Bermuda Atlantic Time Series and Hydrostation S time series were supported by NSF Grants OCE 1756105 and OCE 1633125, respectively. We acknowledge the contributions of BATS technicians with CTD and pigment analyses. We sincerely thank the officers and crew of R/V Atlantic Explorer (Bermuda Institute of Ocean Sciences) for their expert assistance on the cruises. The data used in this study are listed in the figures, tables, and references, and are also available in the NSF's Biological and Chemical Oceanography Data Management Office (BCO‐DMO, https://doi.org/10.1575/1912/bco‐dmo.775902.1).
    Description: 2020-02-16
    Keywords: Hurricanes ; Carbon cycle ; North Atlantic Ocean ; Deep ocean ; Particle fluxes ; Lipid biomarkers
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  • 87
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(5), (2019): 2943-2968, doi:10.1029/2019JC015071.
    Description: In the Southern Ocean, polynyas exhibit enhanced rates of primary productivity and represent large seasonal sinks for atmospheric CO2. Three contrasting east Antarctic polynyas were visited in late December to early January 2017: the Dalton, Mertz, and Ninnis polynyas. In the Mertz and Ninnis polynyas, phytoplankton biomass (average of 322 and 354 mg chlorophyll a (Chl a)/m2, respectively) and net community production (5.3 and 4.6 mol C/m2, respectively) were approximately 3 times those measured in the Dalton polynya (average of 122 mg Chl a/m2 and 1.8 mol C/m2). Phytoplankton communities also differed between the polynyas. Diatoms were thriving in the Mertz and Ninnis polynyas but not in the Dalton polynya, where Phaeocystis antarctica dominated. These strong regional differences were explored using physiological, biological, and physical parameters. The most likely drivers of the observed higher productivity in the Mertz and Ninnis were the relatively shallow inflow of iron‐rich modified Circumpolar Deep Water onto the shelf as well as a very large sea ice meltwater contribution. The productivity contrast between the three polynyas could not be explained by (1) the input of glacial meltwater, (2) the presence of Ice Shelf Water, or (3) stratification of the mixed layer. Our results show that physical drivers regulate the productivity of polynyas, suggesting that the response of biological productivity and carbon export to future change will vary among polynyas.
    Description: This work was cofunded by the Australian Antarctic Division research projects AAS 4131 and 4291. This project was also supported by the Australian Government Cooperative Research Centres Programme through the Antarctic Climate & Ecosystems (ACE CRC). S. Moreau and C. Genovese were supported by the Australian Research Council's Special Research Initiative for Antarctic Gateway Partnership (project ID SR140300001). V. Puigcorbé and M. Roca‐Martí are grateful for the support from Pere Masque and Edith Cowan University. M.C. Arroyo was supported by the Dickhut Fellowship, administered by the Virginia Institute of Marine Science. The authors would like to thank the officers and crew of the R/V Aurora Australis for their logistic support, the CSIRO hydrochemists for their analyses of nutrient concentrations, and E. J. Yang for her microscope analysis of phytoplankton species. We also want to thank two anonymous reviewers for their very good comments on this study. The data presented in this paper are available on the Australian Antarctic Division (AAD) Data Centre at https://data.aad.gov.au/aadc/metadata/metadata_by_parameter.cfm.
    Description: 2019-09-28
    Keywords: Polynyas ; Primary productivity ; Phytoplankton biomass ; Ice shelves ; Sea ice ; Iron
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  • 88
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(3), (2019): 1778-1794, doi:10.1029/2018JC014775.
    Description: Abyssal ocean warming contributed substantially to anthropogenic ocean heat uptake and global sea level rise between 1990 and 2010. In the 2010s, several hydrographic sections crossing the South Pacific Ocean were occupied for a third or fourth time since the 1990s, allowing for an assessment of the decadal variability in the local abyssal ocean properties among the 1990s, 2000s, and 2010s. These observations from three decades reveal steady to accelerated bottom water warming since the 1990s. Strong abyssal (z 〉 4,000 m) warming of 3.5 (±1.4) m°C/year (m°C = 10−3 °C) is observed in the Ross Sea, directly downstream from bottom water formation sites, with warming rates of 2.5 (±0.4) m°C/year to the east in the Amundsen‐Bellingshausen Basin and 1.3 (±0.2) m°C/year to the north in the Southwest Pacific Basin, all associated with a bottom‐intensified descent of the deepest isotherms. Warming is consistently found across all sections and their occupations within each basin, demonstrating that the abyssal warming is monotonic, basin‐wide, and multidecadal. In addition, bottom water freshening was strongest in the Ross Sea, with smaller amplitude in the Amundsen‐Bellingshausen Basin in the 2000s, but is discernible in portions of the Southwest Pacific Basin by the 2010s. These results indicate that bottom water freshening, stemming from strong freshening of Ross Shelf Waters, is being advected along deep isopycnals and mixed into deep basins, albeit on longer timescales than the dynamically driven, wave‐propagated warming signal. We quantify the contribution of the warming to local sea level and heat budgets.
    Description: S. G. P. was supported by a U.S. GO‐SHIP postdoctoral fellowship through NSF grant OCE‐1437015, which also supported L. D. T. and S. M. and collection of U.S. GO‐SHIP data since 2014 on P06, S4P, P16, and P18. G. C. J. is supported by the Global Ocean Monitoring and Observation Program, National Oceanic and Atmospheric Administration (NOAA), U.S. Department of Commerce and NOAA Research. B. M. S and S. E. W. were supported by the Australian Government Department of the Environment and CSIRO through the Australian Climate Change Science Programme and by the National Environmental Science Program. We are grateful for the hard work of the science parties, officers, and crew of all the research cruises on which these CTD data were collected. We also thank the two anonymous reviewers for their helpful comments that improve the manuscript. This is PMEL contribution 4870. All CTD data sets used in this analysis are publicly available at the website (https://cchdo.ucsd.edu).
    Description: 2019-08-20
    Keywords: Abyssal warming ; Pacific deep circulation ; Deep steric sea level ; Deep warming variability ; Antarctic Bottom Water
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  • 89
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(3), (2019): 2088-2109, doi:10.1029/2018JC014583.
    Description: As observations and models improve their resolution of oceanic motions at ever finer horizontal scales, interest has grown in characterizing the transition from the geostrophically balanced flows that dominate at large‐scale to submesoscale turbulence and waves that dominate at small scales. In this study we examine the mesoscale‐to‐submesoscale (100 to 10 km) transition in an eastern boundary current, the southern California Current System (CCS), using repeated acoustic Doppler current profiler transects, sea surface height from high‐resolution nadir altimetry and output from a (1/48)° global model simulation. In the CCS, the submesoscale is as energetic as in western boundary current regions, but the mesoscale is much weaker, and as a result the transition lacks the change in kinetic energy (KE) spectral slope observed for western boundary currents. Helmholtz and vortex‐wave decompositions of the KE spectra are used to identify balanced and unbalanced contributions. At horizontal scales greater than 70 km, we find that observed KE is dominated by balanced geostrophic motions. At scales from 40 to 10 km, unbalanced contributions such as inertia‐gravity waves contribute as much as balanced motions. The model KE transition occurs at longer scales, around 125 km. The altimeter spectra are consistent with acoustic Doppler current profiler/model spectra at scales longer than 70/125 km, respectively. Observed seasonality is weak. Taken together, our results suggest that geostrophic velocities can be diagnosed from sea surface height on scales larger than about 70 km in the southern CCS.
    Description: This research was funded by NASA (NNX13AE44G, NNX13AE85G, NNX16AH67G, NNX16AO5OH, and NNX17AH53G). We thank Sung Yong Kim for providing the high‐frequency radar spectral estimates and the two anonymous reviewers for providing useful comments and suggestions that greatly improved the manuscript. High‐frequency ALES data for Jason‐1 and Jason‐2 altimeters are available upon request (https://openadb.dgfi.tum.de/en/contact/ALES). Both AltiKa and Sentinel‐3 altimeter products were produced and distributed by the Copernicus Marine and Environment Monitoring Service (CMEMS; http://www.marine.copernicus.eu). D. M. worked on the modeling component of this study at the Jet Propulsion Laboratory (JPL), California Institute of Technology, under a contract with the National Aeronautics and Space Administration (NASA). High‐end computing resources were provided by the NASA Advanced Supercomputing (NAS) Division of the Ames Research Center. The LLC output can be obtained from the ECCO project (ftp://ecco.jpl.nasa.gov/ECCO2/LLC4320/). The ADCP data are available at the Joint Archive for Shipboard ADCP data (JASADCP; http://ilikai.soest.hawaii.edu/sadcp).
    Description: 2019-08-21
    Keywords: Mesoscale ; Submesoscale ; Internal gravity waves
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  • 90
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geochemistry Geophysics Geosystems 20(3), (2019): 1485-1507, doi:10.1029/2018GC007985.
    Description: In 2015 a geothermal exploration well was drilled on the island of Tutuila, American Samoa. The sample suite from the drill core provides 645 m of volcanic stratigraphy from a Samoan volcano, spanning 1.45 million years of volcanic history. In the Tutuila drill core, shield lavas with an EM2 (enriched mantle 2) signature are observed at depth, spanning 1.46 to 1.44 Ma. These are overlain by younger (1.35 to 1.17 Ma) shield lavas with a primordial “common” (focus zone) component interlayered with lavas that sample a depleted mantle component. Following ~1.15 Myr of volcanic quiescence, rejuvenated volcanism initiated at 24.3 ka and samples an EM1 (enriched mantle 1) component. The timing of the initiation of rejuvenated volcanism on Tutuila suggests that rejuvenated volcanism may be tectonically driven, as Samoan hotspot volcanoes approach the northern terminus of the Tonga Trench. This is consistent with a model where the timing of rejuvenated volcanism at Tutuila and at other Samoan volcanoes relates to their distance from the Tonga Trench. Notably, the Samoan rejuvenated lavas have EM1 isotopic compositions distinct from shield lavas that are geochemically similar to “petit spot” lavas erupted outboard of the Japan Trench and late stage lavas erupted at Christmas Island located outboard of the Sunda Trench. Therefore, like the Samoan rejuvenated lavas, petit spot volcanism in general appears to be related to tectonic uplift outboard of subduction zones, and existing geochemical data suggest that petit spots share similar EM1 isotopic signatures.
    Description: Reviews from Kaj Hoernle and three anonymous reviewers are gratefully acknowledged. M. G. J. acknowledges support from the American Samoa Power Authority and National Science Foundation grants OCE‐1736984 and EAR‐1624840. The Tutuila drill core was the brainchild of Tim Bodell, without whom we would still have no stratigraphic record of Tutuila volcanism. The support of Utu Abe Malae and Matamua Katrina Mariner was instrumental to the project's success. We dedicate this paper to the memory of Abe Malae and his efforts to support science and education in American Samoa. Images of the entire drill core are available online (escholarship.org/uc/item/6gg6p61w). All data presented are either part of this study or previously published and are referenced in text.
    Description: 2019-08-13
    Keywords: Samoa ; Mantle geochemistry ; Petit spot ; EM1 ; Rejuvenated volcanism
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  • 91
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(7), (2019): 4618-4630, doi: 10.1029/2019JC014940.
    Description: The Arctic Ocean mixed layer interacts with the ice cover above and warmer, nutrient‐rich waters below. Ice‐Tethered Profiler observations in the Canada Basin of the Arctic Ocean over 2006–2017 are used to investigate changes in mixed layer properties. In contrast to decades of shoaling since at least the 1980s, the mixed layer deepened by 9 m from 2006–2012 to 2013–2017. Deepening resulted from an increase in mixed layer salinity that also weakened stratification at the base of the mixed layer. Vertical mixing alone can explain less than half of the observed change in mixed layer salinity, and so the observed increase in salinity is inferred to result from changes in freshwater accumulation via changes to ice‐ocean circulation or ice melt/growth and river runoff. Even though salinity increased, the shallowest density surfaces deepened by 5 m on average suggesting that Ekman pumping over this time period remained downward. A deeper mixed layer with weaker stratification has implications for the accessibility of heat and nutrients stored in the upper halocline. The extent to which the mixed layer will continue to deepen appears to depend primarily on the complex set of processes influencing freshwater accumulation.
    Description: We gratefully acknowledge J. Toole for helpful conversations. S. Cole was supported by the National Science Foundation under grant PLR‐1602926 and J. Stadler by the Woods Hole Oceanographic Institution Summer Student Fellowship program. Profile data are available via the Ice‐Tethered Profiler program website: http://whoi.edu/itp. SSM/I ice concentration data were downloaded from the National Snow and Ice Data Center.
    Description: 2019-12-22
    Keywords: Arctic Ocean ; Mixed layer ; Freshwater
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  • 92
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Druffel, E. R. M., Griffin, S., Wang, N., Garcia, N. G., McNichol, A. P., Key, R. M., & Walker, B. D. Dissolved organic radiocarbon in the central Pacific Ocean. Geophysical Research Letters, 46(10), (2019):5396-5403, doi:10.1029/2019GL083149.
    Description: We report marine dissolved organic carbon (DOC) concentrations, and DOC ∆14C and δ13C values in seawater collected from the central Pacific. Surface ∆14C values are low in equatorial and polar regions where upwelling occurs and high in subtropical regions dominated by downwelling. A core feature of these data is that 14C aging of DOC (682 ± 86 14C years) and dissolved inorganic carbon (643 ± 40 14C years) in Antarctic Bottom Water between 54.0°S and 53.5°N are similar. These estimates of aging are minimum values due to mixing with deep waters. We also observe minimum ∆14C values (−550‰ to −570‰) between the depths of 2,000 and 3,500 m in the North Pacific, though the source of the low values cannot be determined at this time.
    Description: We thank Jennifer Walker, Xiaomei Xu, and Dachun Zhang for their help with the stable carbon isotope measurements; John Southon and staff of the Keck Carbon Cycle AMS Laboratory for their assistance and advice; the support of chief scientists Samantha Siedlecki, Molly Baringer, Alison Macdonald, and Sabine Mecking; the guidance of Jim Swift and Dennis Hansell for shared ship time; and Sarah Bercovici for collecting water on the GoA cruise. We appreciate the comments of Christian Lewis and Niels Hauksson on this manuscript. This work was supported by NSF (OCE‐141458941 to E. R. M. D. and OCE‐0824864, OCE‐1558654, and Cooperative Agreement OCE1239667 to R. M. K. and A. P. M.), the Fred Kavli Foundation, the Keck Carbon Cycle AMS Laboratory, and the NSF/NOAA‐funded GO‐SHIP Program. This research was undertaken, in part, thanks to funding from the Canada Research Chairs program (to B. D. W.) and an American Chemical Society Petroleum Research Fund New Directions grant (55430‐ND2 to E. R. M. D. and B. D. W.). Data from the P16N cruises are available in Table S2 in the Supporting Information and at the Repeat Hydrography Data Center at the CCHDO website (http://cdiac.esd.ornl.gov/oceans/index.html) using the expo codes 3RO20150329, 3RO20150410, and 3RO20150525. There are no real or perceived financial conflicts of interests for any author.
    Description: 2019-11-02
    Keywords: Dissolved organic carbon ; Radiocarbon ; Pacific Ocean ; Dissolved inorganic carbon ; Deep ocean circulation ; AABW
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  • 93
    Publication Date: 2022-10-19
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans, 123(11), (2018): 7795-7818. doi: 10.1029/2018JC013794.
    Description: This work studies the subduction of the shelf water along the onshore edge of a warm‐core ring that impinges on the edge of the Mid‐Atlantic Bight continental shelf. The dynamical analysis is based on observations by satellites and from the Ocean Observatories Initiative Pioneer Array observatory as well as idealized numerical model simulations. They together show that frontogenesis‐induced submesoscale frontal subduction with order‐one Rossby and Froude numbers occurs on the onshore edge of the ring. The subduction flow results from the onshore migration of the warm‐core ring that intensifies the density front on the interface of the ring and shelf waters. The subduction is a part of the cross‐front secondary circulation trying to relax the intensifying density front. The dramatically different physical and biogeochemical properties of the ring and shelf waters provide a great opportunity to visualize the subduction phenomenon. Entrained by the ring‐edge current, the subducted shelf water is subsequently transported offshore below a surface layer of ring water and alongside of the surface‐visible shelf‐water streamer. It explains the historical observations of isolated subsurface packets of shelf water along the ring periphery in the slope sea. Model‐based estimate suggests that this type of subduction‐associated subsurface cross‐shelfbreak transport of the shelf water could be substantial relative to other major forms of shelfbreak water exchange. This study also proposes that outward spreading of the ring‐edge front by the frontal subduction may facilitate entrainment of the shelf water by the ring‐edge current and enhances the shelf‐water streamer transport at the shelf edge.
    Description: W. G. Z. was supported by the National Science Foundation under grants OCE‐1657853, OCE‐1657803, and OCE 1634965. JP is grateful for the support of the Woods Hole Oceanographic Institution Summer Student Fellow Program in 2016 and 2017. W. G. Z. thanks Kenneth Brink, Glen Gawarkiewicz, Rocky Geyer, Steven Lentz, Dennis McGillicuddy, Robert Todd, and John Trowbridge for helpful discussions during the course of the study or useful comments on earlier versions of the manuscript. The satellite sea surface temperature data were obtained from the University of Delaware Ocean Exploration, Remote Sensing, Biogeography Lab (led by Matthew Oliver), through the Mid‐Atlantic Coastal Ocean Observing System (MARACOOS) data server (http://tds.maracoos.org/thredds/catalog.html). The OOI Pioneer Array mooring and glider data presented in this paper were downloaded from the National Science Foundation OOI data portal (http://ooinet.oceanobservatories.org) in July–August 2016.
    Description: 2019-04-15
    Keywords: Frontal subduction ; Warm‐core ring ; Mid‐Atlantic Bight ; Shelf‐water streamer ; Cross‐shelf exchange ; OOI Pioneer Array
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  • 94
    Publication Date: 2022-10-20
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 1123(11), (2018): 8568-8580. doi: 10.1029/2018JC014352.
    Description: In the past decades, in the context of a changing ocean submitted to an increasing human activity, a progressive decrease in the frequencies (pitch) of blue whale vocalizations has been observed worldwide. Its causes, of natural or anthropogenic nature, are still unclear. Based on 7 years of continuous acoustic recordings at widespread sites in the southern Indian Ocean, we show that this observation stands for five populations of large whales. The frequency of selected units of vocalizations of fin, Antarctic, and pygmy blue whales has steadily decreased at a rate of a few tenths of hertz per year since 2002. In addition to this interannual frequency decrease, blue whale vocalizations display seasonal frequency shifts. We show that these intra‐annual shifts correlate with seasonal changes in the ambient noise near their call frequency. This ambient noise level, in turn, shows a strong correlation with the seasonal presence of icebergs, which are one of the main sources of oceanic noise in the Southern Hemisphere. Although cause‐and‐effect relationships are difficult to ascertain, wide‐ranging changes in the acoustic environment seem to have a strong impact on the vocal behavior of large baleen whales. Seasonal frequency shifts may be due to short‐term changes in the ambient noise, and the interannual frequency decline to long‐term changes in the acoustic properties of the ocean and/or in postwhaling changes in whale abundances.
    Description: The authors wish to thank the Captains and crews of RV Marion Dufresne for the successful deployments and recoveries of the hydrophones of the DEFLOHYDRO (Royer, 2008) and OHASISBIO (Royer, 2009) experiments. French cruises were funded by the French Polar Institute (IPEV) with additional support from INSU‐CNRS. NOAA/PMEL also contributed to the DEFLOHYDRO project. E. C. L. was supported by a PhD fellowship from the University of Brest and from the Regional Council of Brittany (Conseil Régional de Bretagne). The contribution of Mickael Beauverger at LGO to the logistics and deployment of the OHASISBIO cruises is greatly appreciated. The data underlying this analysis (weekly averaged frequencies of Antarctic blue whales, pygmy blue whales, and fin whales and daily averaged noise levels at each site) are accessible at http://doi.org/10.17882/51007.
    Description: 2019-05-27
    Keywords: Large baleen whales ; Blue whale calls ; Frequency decrease ; Bioacoustics ; Frequency shifts ; Ambient noise
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  • 95
    Publication Date: 2022-10-20
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 123(11), (2018): 8411-8429, doi: 10.1029/2018JC014178.
    Description: A method for estimating gross primary production (GPP) is presented and validated against a numerical model of Chesapeake Bay that includes realistic physical and biological forcing. The method statistically fits a photosynthesis‐irradiance response curve using the observed near‐surface time rate of change of dissolved oxygen and the incoming solar radiation, yielding estimates of the light‐saturated photosynthetic rate and the initial slope of the photosynthesis‐irradiance response curve. This allows estimation of GPP with 15‐day temporal resolution. The method is applied to the output from a numerical model that has high skill at reproducing both surface and near‐bottom dissolved oxygen variations observed in Chesapeake Bay in 2013. The rate of GPP predicted by the numerical model is known, as are the contributions from physical processes, allowing the proposed diel method to be rigorously assessed. At locations throughout the main stem of the Bay, the method accurately extracts the underlying rate of GPP, including pronounced seasonal variability and spatial variability. Errors associated with the method are primarily the result of contributions by the divergence in turbulent oxygen flux, which changes sign over the surface mixed layer. As a result, there is an optimal vertical location with minimal bias where application of the method is most accurate.
    Description: This paper is the result of research funded in part by NOAA's U.S. Integrated Ocean Observing System (IOOS) Program Office as a subcontract to the Woods Hole Oceanographic Institution under award NA13NOS120139 to the Southeastern University Research Association. All of the model output, as well as both the CBIBS data (2010–2016) and the bottom oxygen data of Scully (2016b), are publicly available through the THREDDS server associated with the IOOS Coastal Modeling Testbed site: https://comt.ioos.us/projects/cb_hypoxia.
    Description: 2019-05-24
    Keywords: Gross primary production ; Vertical mixing ; Numerical model ; Chesapeake Bay
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  • 96
    Publication Date: 2022-10-20
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Theoretical considerations on factors confounding the interpretation of the oceanic carbon export ratio. Global Biogeochemical Cycles, 32(11), (2018); 1644-1658, doi:10.1029/2018GB006003.
    Description: The fraction of primary production exported out of the surface ocean, known as the export ratio (ef ratio), is often used to assess how various factors, including temperature, primary production, phytoplankton size, and community structure, affect the export efficiency of an ecosystem. To investigate possible causes for reported discrepancies in the dominant factors influencing the export efficiency, we develop a metabolism‐based mechanistic model of the ef ratio. Consistent with earlier studies, we find based on theoretical considerations that the ef ratio is a negative function of temperature. We show that the ef ratio depends on the optical depth, defined as the physical depth times the light attenuation coefficient. As a result, varying light attenuation may confound the interpretation of ef ratio when measured at a fixed depth (e.g., 100 m) or at the base of the mixed layer. Finally, we decompose the contribution of individual factors on the seasonality of the ef ratio. Our results show that at high latitudes, the ef ratio at the base of mixed layer is strongly influenced by mixed layer depth and surface irradiation on seasonal time scales. Future studies should report the ef ratio at the base of the euphotic layer or account for the effect of varying light attenuation if measured at a different depth. Overall, our modeling study highlights the large number of factors confounding the interpretation of field observations of the ef ratio.
    Description: Z. L was supported by a NASA Earth and Space Science Fellowship (Grant NNX13AN85H) and the Postdoctoral Scholarship Program at Woods Hole Oceanographic Institution. N. C. was supported by NASA Grant 5109296. Satellite data, nutrient concentration, and monthly MLD climatology are downloaded from NASA ocean color (http://oceancolor.gsfc.nasa.gov/cms/), World Ocean Atlas (https://www.nodc.noaa.gov/OC5/woa13/), and http://www.ifremer.fr/cerweb/deboyer/mld/home.php, respectively.
    Description: 2019-04-13
    Keywords: Oceanic carbon export ratio ; Net community production ; Export production ; Net primary production
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  • 97
    Publication Date: 2022-10-20
    Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124 (2019): 196-211, doi:10.1029/2018JC014313.
    Description: Since the late nineteenth century, channel depths have more than doubled in parts of New York Harbor and the tidal Hudson River, wetlands have been reclaimed and navigational channels widened, and river flow has been regulated. To quantify the effects of these modifications, observations and numerical simulations using historical and modern bathymetry are used to analyze changes in the barotropic dynamics. Model results and water level records for Albany (1868 to present) and New York Harbor (1844 to present) recovered from archives show that the tidal amplitude has more than doubled near the head of tides, whereas increases in the lower estuary have been slight (〈10%). Channel deepening has reduced the effective drag in the upper tidal river, shifting the system from hyposynchronous (tide decaying landward) to hypersynchronous (tide amplifying). Similarly, modeling shows that coastal storm effects propagate farther landward, with a 20% increase in amplitude for a major event. In contrast, the decrease in friction with channel deepening has lowered the tidally averaged water level during discharge events, more than compensating for increased surge amplitude. Combined with river regulation that reduced peak discharges, the overall risk of extreme water levels in the upper tidal river decreased after channel construction, reducing the water level for the 10‐year recurrence interval event by almost 3 m. Mean water level decreased sharply with channel modifications around 1930, and subsequent decadal variability has depended both on river discharge and sea level rise. Channel construction has only slightly altered tidal and storm surge amplitudes in the lower estuary.
    Description: Funding for D. K. R., W. R. G., and C. K. S. was provided by NSF Coastal SEES awards OCE-1325136 and OCE-1325102. Funding for S.T. and H. Z. was provided by the U.S. Army Corps of Engineers (award W1927 N-14-2-0015), and NSF (Career Award 1455350). Data supporting this study are posted to Zenodo (https://doi.org/10.5281/zenodo.1298636).
    Description: 2019-06-11
    Keywords: Barotropic tides ; Flood frequency ; Storm surge ; Dredging ; Estuary ; Tidal river
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  • 98
    Publication Date: 2022-10-20
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Wave generation, dissipation, and disequilibrium in an embayment with complex bathymetry. Journal of Geophysical Research-Oceans, 123(11), (2018): 7856-7876, doi:10.1029/2018JC014381.
    Description: Heterogeneous, sharply varying bathymetry is common in estuaries and embayments, and complex interactions between the bathymetry and wave processes fundamentally alter the distribution of wave energy. The mechanisms that control the generation and dissipation of wind waves in an embayment with heterogeneous, sharply varying bathymetry are evaluated with an observational and numerical study of the Delaware Estuary. Waves in the lower bay depend on both local wind forcing and remote wave forcing from offshore, but elsewhere in the estuary waves are controlled by the local winds and the response of the wavefield to bathymetric variability. Differences in the wavefield with wind direction highlight the impacts of heterogeneous bathymetry and limited fetch. Under the typical winter northwest wind conditions waves are fetch‐limited in the middle estuary and reach equilibrium with local water depth only in the lower bay. During southerly wind conditions typical of storms, wave energy is near equilibrium in the lower bay, and midestuary waves are attenuated by the combination of whitecapping and bottom friction, particularly over the steep, longitudinal shoals. Although the energy dissipation due to bottom friction is generally small relative to whitecapping, it becomes significant where the waves shoal abruptly due to steep bottom topography. In contrast, directional spreading keeps wave heights in the main channel significantly less than local equilibrium. The wave disequilibrium in the deep navigational channel explains why the marked increase in depth by dredging of the modern channel has had little impact on wave conditions.
    Description: Funding was provided by National Science Foundation Coastal SEES: Toward Sustainable Urban Estuaries in the Anthropocene (OCE 1325136) and Ministry of Science and Technology (MOST 107‐2611‐M‐006‐004). We thank James Kirby, Fengyan Shi, and the two anonymous reviewers for their careful reading of our manuscript and their insightful comments. We thank Tracy Quirk for providing wave measurements in Bombay Hook, DE and Stow Creek, NJ. We thank Katie Pijanowski for compiling historical and modern bathymetric data for the estuary. Data supporting this study are posted to Zenodo (http://doi.org/10.5281/zenodo.1433055).
    Description: 2019-04-04
    Keywords: Estuarine hydrodynamics ; Wave energy ; Equilibrium wave ; Anthropogenic impact
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  • 99
    Publication Date: 2022-10-20
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Using carbon isotope fractionation to constrain the extent of methane dissolution into the water column surrounding a natural hydrocarbon gas seep in the northern gulf of Mexico. Geochemistry Geophysics Geosystems, 19(11), (2018); 4459-4475., doi:10.1029/2018GC007705.
    Description: A gas bubble seep located in the northern Gulf of Mexico was investigated over several days to determine whether changes in the stable carbon isotopic ratio of methane can be used as a tracer for methane dissolution through the water column. Gas bubble and water samples were collected at the seafloor and throughout the water column for isotopic ratio analysis of methane. Our results show that changes in methane isotopic ratios are consistent with laboratory experiments that measured the isotopic fractionation from methane dissolution. A Rayleigh isotope model was applied to the isotope data to determine the fraction of methane dissolved at each depth. On average, the fraction of methane dissolved surpasses 90% past an altitude of 400 m above the seafloor. Methane dissolution was also investigated using a modified version of the Texas A&M Oil spill (Outfall) Calculator (TAMOC) where changes in methane isotopic ratios could be calculated. The TAMOC model results show that dissolution depends on depth and bubble size, explaining the spread in measured isotopic ratios during our investigations. Both the Rayleigh and TAMOC models show that methane bubbles quickly dissolve following emission from the seafloor. Together, these results show that it is possible to use measurements of natural methane isotopes to constrain the extent of methane dissolution following seafloor emission.
    Description: This research was made possible by two grants from the Gulf of Mexico Research Initiative: Gulf Integrated Spill Response (GISR) Consortium (awarded to J. D. K. and S. A. S.) and Center for Integrated Modeling and Assessment of the Gulf Ecosystem (C‐IMAGE) II (awarded to S. A. S.). Additional support was provided by the U.S. Department of Energy (DE‐FE0028980; awarded to J. D. K.). Data are publicly available through the Gulf of Mexico Research Initiative Information & Data Cooperative (GRIIDC). Methane concentration and isotopic ratio data can be found at https://data.gulfresearchinitiative.org/data/R1.x137.000:0025, and TAMOC model scripts and results are found at https://data.gulfresearchinitiative.org/data/R1.x137.000:0026. The coversion of methane isotopic ratio data used in this manuscript can be found at https://data.gulfresearchinitiative.org/data/R1.x137.000:0028. We want to thank the captain and crew of the E/V Nautilus and the operators of ROV Hercules and Argus during the GISR G08 cruise and Nicole Raineault for their outstanding support at sea. Acoustically identifying the bubble flare was managed by Andone Lavery, and support for collecting gas and water samples was provided by John Bailey. We also want to thank Sean Sylva for analytical assistance on shore, Inok Jun for helping create the sampling schematics, and David Brink‐Roby for helping create the sample site map.
    Description: 2019-04-20
    Keywords: Methane ; Bubble ; Hydrate ; Dissolution ; Isotope
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  • 100
    Publication Date: 2022-10-20
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 123(11), (2018): 8430-8443, doi: 10.1029/2018JC014179.
    Description: A diel method for estimating gross primary production (GPP) is applied to nearly continuous measurements of near‐surface dissolved oxygen collected at seven locations throughout the main stem of Chesapeake Bay. The data were collected through the Chesapeake Bay Interpretive Buoy System and span the period 2010–2016. At all locations, GPP exhibits pronounced seasonal variability consistent temperature‐dependent phytoplankton growth. At the Susquehanna Buoy, which is located within the estuarine turbidity maximum, rates of GPP are negatively correlated with uncalibrated turbidity data consistent with light limitation at this location. The highest rates of GPP are located immediately down Bay from the estuarine turbidity maximum and decrease moving seaward consistent with nutrient limitation. Rates of GPP at the mouth (First Landing Buoy) are roughly a factor of 3 lower than the rates in the upper Bay (Patapsco). At interannual time scales, the summer (June–July) rate of GPP averaged over all stations is positively correlated (r2 = 0.62) with the March Susquehanna River discharge and a multiple regression model that includes spring river discharge, and summer water temperature can explain most (r2 = 0.88) of the interannual variance in the observed rate of GPP. The correlation with river discharge is consistent with an increase in productivity fueled by increased nutrient loading. More generally, the spatial and temporal patterns inferred using this method are consistent with our current understanding of primary production in the Bay, demonstrating the potential this method has for making highly resolved measurements in less well studied estuarine systems.
    Description: This paper is the result of research funded in part by NOAA's U.S. Integrated Ocean Observing System (IOOS) Program Office as a subcontract to the Woods Hole Oceanographic Institution under award NA13NOS120139 to the Southeastern University Research Association. All of the data analyzed in this paper are publicly available including the CBIBS data (http://buoybay.noaa.gov), the NCEP NARR data (https://www.esrl.noaa.gov/psd), and the Kd‐490 MODIS data (ftp://ftp.star.nesdis.noaa.gov/pub/socd1/ecn/data/modis/k490noaa/monthly/cd/). Model output analyzed in this paper is publicly available through the THREDDS server associated with the IOOS Coastal and Ocean Modeling Testbed (COMT) site (https://comt.ioos.us/projects/cb_hypoxia). Postprocessed and compiled data for all seven CBIBS locations including the interpolated values of incoming solar radiation and satellite‐derived Kd‐490 can also be download from the COMT site.
    Description: 2019-05-25
    Keywords: Gross primary production ; Chesapeake Bay ; Observing system ; Diel variability
    Repository Name: Woods Hole Open Access Server
    Type: Article
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