ALBERT

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 53(3), (2019): 1639-1649, doi:10.1029/2018JC014454.

Description: Circulation patterns over the inner continental shelf can be spatially complex and highly variable in time. However, few studies have examined alongshore variability over short scales of kilometers or less. To observe inner‐shelf bottom temperatures with high (5‐m) horizontal resolution, a fiber‐optic distributed temperature sensing system was deployed along a 5‐km‐long portion of the 15‐m isobath within a larger‐scale mooring array south of Martha's Vineyard, MA. Over the span of 4 months, variability at a range of scales was observed along the cable over time periods of less than a day. Notably, rapid cooling events propagated down the cable away from a tidal mixing front, showing that propagating fronts on the inner shelf can be generated locally near shallow bathymetric features in addition to remote offshore locations. Propagation velocities of observed fronts were influenced by background tidal currents in the alongshore component and show a weak correlation with theoretical gravity current speeds in the cross‐shore component. These events provide a source of cold, dense water into the inner shelf. However, differences in the magnitude and frequency of cooling events at sites separated by a few kilometers in the alongshore direction suggest that the characteristics of small‐scale variability can vary dramatically and can result in differential fluxes of water, heat, and other tracers. Thus, under stratified conditions, prolonged subsurface observations with high spatial and temporal resolution are needed to characterize the implications of three‐dimensional circulation patterns on exchange, especially in regions where the coastline and isobaths are not straight.

Description: Deployment of the DTS system was made possible by the Center for Transformative Environmental Monitoring Programs (CTEMPS), with input, assistance, and software provided by John Selker, Scott Tyler, Paul Wetzel, Mark Hausner, and Scott Kobs. The authors thank Hugh Popenoe, Jared Schwartz, and Brian Guest for their technical expertise and effort with setup, deployment, and recovery of the DTS system, as well as the captains and crew of the R/V Discovery and R/V Tioga. Janet Fredericks assisted with integrating the DTS measurements with Martha's Vineyard Coastal Observatory infrastructure. Steve Lentz was instrumental in the design and deployment of the ISLE mooring array. Craig Marquette provided invaluable expertise and effort in the deployment of the ISLE mooring array. The authors thank Greg Gerbi for providing velocity data at site H and Malcolm Scully for providing velocity and near‐bottom temperature data at site E. Kenneth Brink and two anonymous reviewers provided valuable comments on the manuscript. DTS measurements were supported by the Woods Hole Oceanographic Institution. The ISLE project is supported by NSF (OCE‐83264600). T. Connolly acknowledges support from NSF (OCE‐1433716) and a WHOI postdoctoral scholarship funded by the U.S. Geological Survey and the WHOI Coastal Ocean Institute. DTS data are available on Zenodo (Connolly & Kirincich, 2018, https://doi.org/10.5281/zenodo.1136113). ISLE mooring data are available on the WHOI Open Access Data Server (Kirincich & Lentz, 2017b, https://doi.org/10.1575/1912/8740).

Description: 2019-06-28

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(2), (2019): 1322-1330, doi:10.1029/2018JC014106.

Description: A Lagrangian model is constructed for a surface column of initial height h(0) that propagates at an average speed u and is subject to excess (i.e., net) evaporation of q m/year. It is shown that these parameters combine to form an evaporation length, L = uh(0)/q, which provides an estimate for the distance the column must travel before evaporating completely. While these changes in the surface water level due to evaporation are compensated by entrainment of water into the overall column, the changes in either near‐surface salinity or isotopic compositions are retained and can be measured. Observations of surface salinity and isotopic compositions of δ18O and δD along 1,000‐ to 3,500‐km long transects are used to estimate values of L in the Red Sea, Mediterranean Sea, Indian Ocean, and Gulf Stream. The variations of salinity, δ18O and δD in all four basins are linear. As anticipated, the estimated value of L is smallest in the slowly moving and arid Red Sea and is greatest in the fast‐moving Gulf Stream.

Description: The salinity and δ18O data collected aboard the Indian Ocean cruise described in Srivastava et al. (2007) can be accessed at this website (https://www.nodc.noaa.gov). The salinity, δ18O and δD data collected during the Red Sea cruise of the Interuniversity Institute for Marine Sciences, Eilat, described in Steiner et al. (2014) and can be accessed in the supporting information section of doi: 10.1073/pnas.1414323111. H. B. acknowledges the support provided by the Eshkol Foundation of the Israel Ministry of Science.

Description: 2019-07-26

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 46(5), (2019):2434-2448, doi:10.1029/2018GL080997.

Description: Deep earthquakes exhibit strong variabilities in their rupture and aftershock characteristics, yet their physical failure mechanisms remain elusive. The 2018 Mw 8.2 and Mw 7.9 Tonga‐Fiji deep earthquakes, the two largest ever recorded in this subduction zone, occurred within days of each other. We investigate these events by performing waveform analysis, teleseismic P wave backprojection, and aftershock relocation. Our results show that the Mw 8.2 earthquake ruptured fast (4.1 km/s) and excited frequency‐dependent seismic radiation, whereas the Mw 7.9 earthquake ruptured slowly (2.5 km/s). Both events lasted ∼35 s. The Mw 8.2 earthquake initiated in the highly seismogenic, cold core of the slab and likely ruptured into the surrounding warmer materials, whereas the Mw 7.9 earthquake likely ruptured through a dissipative process in a previously aseismic region. The contrasts in earthquake kinematics and aftershock productivity argue for a combination of at least two primary mechanisms enabling rupture in the region.

Description: We thank the Editor Gavin Hayes and two anonymous reviewers for their helpful comments that improved the quality of the manuscript. The seismic data were provided by Data Management Center (DMC) of the Incorporated Research Institutions for Seismology (IRIS). The facilities of IRIS Data Services, and specifically the IRIS Data Management Center, were used for access to waveforms, related metadata, and/or derived products used in this study. IRIS Data Services are funded through the Seismological Facilities for the Advancement of Geoscience and EarthScope (SAGE) Proposal of the National Science Foundation under Cooperative Agreement EAR‐1261681. W. F. acknowledges supports from the Postdoctoral Scholar Program at the Woods Hole Oceanographic Institution, with funding provided by the Weston Howland Postdoctoral Scholarship. S. S. W. and D. T. are supported by the MSU Geological Sciences Endowment.

Description: 2019-08-20

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Tectonics, 38(2), (2019):666-686. doi:10.1029/2018TC005246.

Description: A magnetotelluric survey in the Barotse Basin of western Zambia shows clear evidence for thinned lithosphere beneath an orogenic belt. The uppermost asthenosphere, at a depth of 60–70 km, is highly conductive, suggestive of the presence of a small amount of partial melt, despite the fact that there is no surface expression of volcanism in the region. Although the data support the presence of thicker cratonic lithosphere to the southeast of the basin, the lithospheric thickness is not well resolved and models show variations ranging from ~80 to 150 km in this region. Similarly variable is the conductivity of the mantle beneath the basin and immediately beneath the cratonic lithosphere to the southeast, although the conductivity is required to be elevated compared to normal lithospheric mantle. In a general sense, two classes of model are compatible with the magnetotelluric data: one with a moderately conductive mantle and one with more elevated conductivities. This latter class would be consistent with the impingement of a stringer of plume‐fed melt beneath the cratonic lithosphere, with the melt migrating upslope to thermally erode lithosphere beneath the orogenic belt that is overlain by the Barotse Basin. Such processes are potentially important for intraplate volcanism and also for development or propagation of rifting as lithosphere is thinned and weakened by melt. Both models show clear evidence for thinning of the lithosphere beneath the orogenic belt, consistent with elevated heat flow data in the region.

Description: Funding for MT acquisition and analysis was provided by the National Science Foundation grant EAR‐1010432 through the Continental Dynamics Program. The data used in this study are available for download at the IRIS Data Management Center through the DOI links cited in Jones et al. (2003–2008; https://doi.org/10.17611/DP/EMTF/SAMTEX) and Evans et al. (2012; https://doi.org/10.17611/DP/EMTF/PRIDE/ZAM). We would like to thank the field crew from the Geological Survey Department, Zambia, for their assistance in collecting data. Matthew Chamberlain, David Margolius, and Colin Skinner, formerly of Northeastern University, are also thanked for their field assistance. Data are available from the corresponding author pending their submission to the IRIS DMC repository at which point they will be publically available. This is Oklahoma State University, Boone Pickens School of Geology contribution number 2019‐99.

Description: 2019-07-30

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(6), (2019): 3628-3644, doi:10.1029/2018JC014805.

Description: The Arctic Ocean is experiencing profound environmental changes as the climate warms. Understanding how these changes will affect Arctic biological productivity is key for predicting future Arctic ecosystems and the global CO2 balance. Here we use in situ gas measurements to quantify rates of gross oxygen production (GOP, total photosynthesis) and net community production (NCP, net CO2 drawdown by the biological pump) in the mixed layer in summer or fall from 2011 to 2016 in the Beaufort Gyre. NCP and GOP show spatial and temporal variations with higher values linked with lower concentrations of sea ice and increased upper ocean stratification. Mean rates of GOP range from 8 ± 1 to 54 ± 9 mmol O2·m−2·d−1 with the highest mean rates occurring in summer of 2012. Mean rates of NCP ranged from 1.3 ± 0.2 to 2.9 ± 0.5 mmol O2·m−2·d−1. The mean ratio of NCP/GOP, a measure of how efficiently the ecosystem is recycling its nutrients, ranged from 0.04 to 0.17, similar to ratios observed at lower latitudes. Additionally, a large increase in total photosynthesis that occurred in 2012, a year of historically low sea ice coverage, persisted for many years. Taken together, these data provide one of the most complete characterizations of interannual variations of biological productivity in this climatically important region, can serve as a baseline for future changes in rates of production, and give an intriguing glimpse of how this region of the Arctic may respond to future lack of sea ice.

Description: We sincerely thank the scientific teams of Fisheries and Oceans Canada's Joint Ocean Ice Studies expedition and Woods Hole Oceanographic Institution's Beaufort Gyre Observing System. The hydrographic, nutrient, and chlorophyll data were collected and made available by the Beaufort Gyre Exploration Program based at the Woods Hole Oceanographic Institution (http://www.whoi.edu/beaufortgyre) in collaboration with researchers from Fisheries and Oceans Canada at the Institute of Ocean Sciences. We thank the captains and crews of the Canadian icebreaker CCGS Louis S. St‐Laurent and Mike Dempsey for sample collection. This paper was improved by the suggestions of Michael DeGrandpre and one anonymous reviewer. We are grateful to Qing Wang at Wellesley College for her assistance with statistics. We thank our funding sources: the National Science Foundation (NSF 1547011, NSF 1302884, NSF 1719280, NSF 1643735) and the support of Fisheries and Oceans Canada. Data presented and discussed in this paper can be found in the Arctic Data Center (http://10.18739/A2W389).

Description: 2019-10-30

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters, 46(12), (2019): 6644-6652, doi:10.1029/2019GL082842.

Description: Understanding deformation in ice shelves is necessary to evaluate the response of ice shelves to thinning. We study microseismicity associated with ice shelf deformation using nine broadband seismographs deployed near a rift on the Ross Ice Shelf. From December 2014 to November 2016, we detect 5,948 icequakes generated by rift deformation. Locations were determined for 2,515 events using a least squares grid‐search and double‐difference algorithms. Ocean swell, infragravity waves, and a significant tsunami arrival do not affect seismicity. Instead, seismicity correlates with tidal phase on diurnal time scales and inversely correlates with air temperature on multiday and seasonal time scales. Spatial variability in tidal elevation tilts the ice shelf, and seismicity is concentrated while the shelf slopes downward toward the ice front. During especially cold periods, thermal stress and embrittlement enhance fracture along the rift. We propose that thermal stress and tidally driven gravitational stress produce rift seismicity with peak activity in the winter.

Description: NSF grants PLR‐1142518, 1141916, and 1142126 supported S. D. Olinger and D. A. Wiens, R. C. Aster, and A. A. Nyblade respectively. NSF grant PLR‐1246151 supported P. D. Bromirski, P. Gerstoft, and Z. Chen. NSF grant OPP‐1744856 and CAL‐DPR‐C1670002 also supported P. D. Bromirski. NSF grant PLR‐1246416 supported R. A. Stephen. The Incorporated Research Institutions for Seismology (IRIS) and the PASSCAL Instrument Center at New Mexico Tech provided seismic instruments and deployment support. The RIS seismic data (network code XH) are archived at the IRIS Data Management Center (http://ds.iris.edu/ds/nodes/dmc/). S. D. Olinger catalogued and located icequakes, analyzed seismicity and environmental forcing, and drafted the manuscript. D. A. Wiens and B. P. Lipovsky provided significant contributions to the analysis and interpretation of results and to the manuscript text. D. A. Wiens, R. C. Aster, A. A. Nyblade, R. A. Stephen, P. Gerstoft, and P. D. Bromirski collaborated to design and obtain funding for the deployment. D. A. Wiens, R. C. Aster, R. A. Stephen, P. Gerstoft, P. D. Bromirski, and Z. Chen deployed and serviced seismographs in Antarctica. All authors provided valuable feedback, comments, and edits to the manuscript text. Special thanks to Patrick Shore for guidance throughout the research process.

Description: 2019-11-23

Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Mulholland, M. R., Bernhardt, P. W., Widner, B. N., Selden, C. R., Chappell, P. D., Clayton, S., Mannino, A., & Hyde, K. High rates of N-2 fixation in temperate, western North Atlantic coastal waters expand the realm of marine diazotrophy. Global Biogeochemical Cycles, 33(7), (2019): 826-840, doi:10.1029/2018GB006130.

Description: Dinitrogen (N2) fixation can alleviate N limitation of primary productivity by introducing fixed nitrogen (N) to the world's oceans. Although measurements of pelagic marine N2 fixation are predominantly from oligotrophic oceanic regions, where N limitation is thought to favor growth of diazotrophic microbes, here we report high rates of N2 fixation from seven cruises spanning four seasons in temperate, western North Atlantic coastal waters along the North American continental shelf between Cape Hatteras and Nova Scotia, an area representing 6.4% of the North Atlantic continental shelf area. Integrating average areal rates of N2 fixation during each season and for each domain in the study area, the estimated N input from N2 fixation to this temperate shelf system is 0.02 Tmol N/year, an amount equivalent to that previously estimated for the entire North Atlantic continental shelf. Unicellular group A cyanobacteria (UCYN‐A) were most often the dominant diazotrophic group expressing nifH, a gene encoding the nitrogenase enzyme, throughout the study area during all seasons. This expands the domain of these diazotrophs to include coastal waters where dissolved N concentrations are not always depleted. Further, the high rates of N2 fixation and diazotroph diversity along the western North Atlantic continental shelf underscore the need to reexamine the biogeography and the activity of diazotrophs along continental margins. Accounting for this substantial but previously overlooked source of new N to marine systems necessitates revisions to global marine N budgets.

Description: Data presented in the body and supporting information of this manuscript have been deposited in the National Aeronautics and Space Administration (NASA) repository, SeaBASS and is publicly available at the following DOI address: 10.5067/SeaBASS/CLIVEC/DATA 001. This work was supported by a grant from NASA Grant Number: NNX09AE45G to M. R. M., A. M., and K. H.; a grant from NSF to P. D. C; and the Jacques S. Zaneveld and Neil and Susan Kelley Endowed Scholarships to C. S. We thank NOAA for ship time and the captain and crew of NOAA vessels Delaware II and Henry Bigelow for assistance during field sampling. Data have been submitted to SeaBASS (https://seabass.gsfc.nasa.gov/), NASA's preferred archival repository.

Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution-NonCommercial‐NoDerivs License. The definitive version was published in Rodriguez, L. G., Cohen, A. L., Ramirez, W., Oppo, D. W., Pourmand, A., Edwards, R. L., Alpert, A. E., & Mollica, N. Mid-Holocene, coral-based sea surface temperatures in the western tropical Atlantic. Paleoceanography and Paleoclimatology, 34(7), (2019): 1234-1245, doi:10.1029/2019PA003571.

Description: The Holocene is considered a period of relative climatic stability, but significant proxy data‐model discrepancies exist that preclude consensus regarding the postglacial global temperature trajectory. In particular, a mid‐Holocene Climatic Optimum, ~9,000 to ~5,000 years BP, is evident in Northern Hemisphere marine sediment records, but its absence from model simulations raises key questions about the ability of the models to accurately simulate climate and seasonal biases that may be present in the proxy records. Here we present new mid‐Holocene sea surface temperature (SST) data from the western tropical Atlantic, where twentieth‐century temperature variability and amplitude of warming track the twentieth‐century global ocean. Using a new coral thermometer Sr‐U, we first developed a temporal Sr‐U SST calibration from three modern Atlantic corals and validated the calibration against Sr‐U time series from a fourth modern coral. Two fossil corals from the Enriquillo Valley, Dominican Republic, were screened for diagenesis, U‐series dated to 5,199 ± 26 and 6,427 ± 81 years BP, respectively, and analyzed for Sr/Ca and U/Ca, generating two annually resolved Sr‐U SST records, 27 and 17 years long, respectively. Average SSTs from both corals were significantly cooler than in early instrumental (1870–1920) and late instrumental (1965–2016) periods at this site, by ~0.5 and ~0.75 °C, respectively, a result inconsistent with the extended mid‐Holocene warm period inferred from sediment records. A more complete sampling of Atlantic Holocene corals can resolve this issue with confidence and address questions related to multidecadal and longer‐term variability in Holocene Atlantic climate.

Description: This study was supported by NSF OCE 1747746 to Anne Cohen and by NSF OCE 1805618 to Anne Cohen and Delia Oppo. Eric Loss and his crew on Pangaea Exploration's Sea Dragon enabled fieldwork in Martinique, and George P. Lohman, Thomas DeCarlo, and Hanny Rivera assisted with coral coring. Kathryn Pietro and Julia Middleton assisted in the laboratory, and Louis Kerr provided technical support on the SEM at MBL. Gretchen Swarr provided technical support on the Element and iCap ICPMS at WHOI. We also thank Edwin Hernandez, Jose Morales, and Amos Winter for discussion. All data generated in this study will be made publicly available at http://www.ncdc.noaa.gov/data‐ access/paleoclimatology‐data/datasets

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 46(14), (2019): 8252-8260, doi: 10.1029/2019GL083517.

Description: Brothers volcano is the most hydrothermally active volcano along the Kermadec arc, with distinct hydrothermal fields located on the caldera walls and on the postcollapse volcanic cones. These sites display very different styles of hydrothermal activity in terms of temperature, gas content, fluid chemistry, and associated mineralization. Here we show the results of a systematic heat flow survey integrated with near‐seafloor magnetic data acquired using remotely operated vehicles and autonomous underwater vehicles. Large‐scale circulation is structurally controlled, with a deep (~1‐ to 2‐km depth) central recharge through the caldera floor and lateral discharge along the caldera walls and at the summits of the postcollapse cones. Shallow (~ 0.1‐0.2 km depth) circulation is characterized by small‐scale recharge zones located at a distance of ~ 0.1–0.2 km from the active vent sites.

Description: We thank the Captains and crews of the R/V Sonne, Thompson, and Tangaroa and the engineers from Wood Hole Oceanographic Institution and MARUM for the successful operation of ABE, Sentry, Quest 4000, and Jason. The heat flow data surveys were funded by NSF grant OCE‐1558356 (PI Susan Humphris) and a grant from the German Ministry for Education and Research BMBF, project no. 03G0253A (PI Andrea Koschinsky). Funding from the New Zealand Government (Ministry of Business, Innovation and Employment) helped enable this study. This paper was significantly improved by the comments from the Editor Rebecca Carey and from two unknown reviewers. The data used in this paper can be downloaded from the U.S. Lamont‐Doherty MGDS database.

Description: 2020-01-18

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 46(15), (2019): 8893-8902, doi:10.1029/2019GL084123.

Description: Gravity waves impacting ice shelves illicit a suite of responses that can affect ice shelf integrity. Broadband seismometers deployed on the Ross Ice Shelf, complemented by a near‐icefront seafloor hydrophone, establish the association of strong icequake activity with ocean gravity wave amplitudes (AG) below 0.04 Hz. The Ross Ice Shelf‐front seismic vertical displacement amplitudes (ASV) are well correlated with AG, allowing estimating the frequency‐dependent transfer function from gravity wave amplitude to icefront vertical displacement amplitude (TGSV(f)). TGSV(f) is 0.6–0.7 at 0.001–0.01 Hz but decreases rapidly at higher frequencies. Seismicity of strong icequakes exhibits spatial and seasonal associations with different gravity wave frequency bands, with the strongest icequakes observed at the icefront primarily during the austral summer when sea ice is minimal and swell impacts are strongest.

Description: Bromirski, Gerstoft, and Chen were supported by NSF grant PLR‐1246151. Bromirski also received support from NSF grant OPP‐1744856 and CAL‐DPR‐C1670002. Stephen, Wiens, Aster, and Nyblade were supported under NSF grants PLR‐1246416, 1142518, 1141916, and 1142126, respectively. Lee and Yun were support by a research grant from the Korean Ministry of Oceans and Fisheries (KIMST20190361; PM19020). Seismic instruments and on‐ice support were provided by the Incorporated Research Institutions for Seismology (IRIS) through the PASSCAL Instrument Center at New Mexico Tech. The RIS and KPDR seismic data are archived at the IRIS Data Management Center, http://ds.iris.edu/ds/nodes/dmc/, with network codes XH and KP, respectively. The facilities of the IRIS Consortium are supported by the National Science Foundation under Cooperative Agreement EAR‐1261681 and the DOE National Nuclear Security Administration. We thank Patrick Shore, Michael Baker, Cai Chen, Robert Anthony, Reinhard Flick, Jerry Wanetick, Weisen Shen, Tsitsi Madziwa Nussinov, and Laura Stevens for their help with field operations. Logistical support from the U.S. Antarctica Program and staff at McMurdo Station was critical and is much appreciated.

Description: 2020-02-01

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Biogeosciences 124 (2019): 2823-2850, doi:10.1029/2019JG005113.

Description: Microscopy techniques have been widely applied to observe cellular ultrastructure. Most of these techniques, such as transmission electron microscopy, produce high‐resolution images, but they may require extensive preparation, hampering their application for in vivo examination. Other approaches, such as fluorescent and fluorogenic probes, can be applied not only to fixed specimens but also to living cells when the probes are nontoxic. Fluorescence‐based methods, which are generally relatively easy to use, allow visual and (semi)quantitative studies of the ultrastructural organization and processes of the cell under natural as well as manipulated conditions. To date, there are relatively few published studies on the nearly ubiquitous marine protistan group Foraminifera that have used fluorescent and fluorogenic probes, despite their huge potential. The aim of the present contribution is to document the feasible application of a wide array of these probes to foraminiferal biology. More specifically, we applied fluorescence‐based probes to study esterase activity, cell viability, calcium signaling, pH variation, reactive oxygen species, neutral and polar lipids, lipid droplets, cytoskeleton structures, Golgi complex, acidic vesicles, nuclei, and mitochondria in selected foraminiferal species.

Description: The authors are very grateful to the Editor‐in‐Chief Miguel Goni and two anonymous reviewers for their thoughtful and valuable comments that have greatly improved the paper. Markus Raitzsch and Karina Kaczmarek from the AWI, Jakub Kordas from the ZOO Wrocław sp. z o. o. (Poland), and Max Janse from The Royal Burgers' Zoo (Arnhem, the Netherlands) are gratefully acknowledged. The authors declare that no competing interests exist. All the data are included within the paper or the supporting information accompanying it. The research for this paper was partially supported by the Ministero dell'Istruzione, dell'Università e della Ricerca (PRIN 2010‐2011 protocollo 2010RMTLYR) to R.C., the Japan Society for the Promotion of Science KAKENHI Grant (Numbers: JP18H06074, JP17H02978, JP19H02009, JP19H03045) to T.T. and Y.N., the WHOI Investment in Science Program to J.M.B, the Polish National Science Center (Grant DEC‐2015/19/B/ST10/01944) J.T. and J.G. and the Kuwait Foundation for the Advancement of Sciences (EM084C) to E.A‐E.

Description: 2020-02-22

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(5), (2019): 3279-3297, doi: 10.1029/2019JC014988.

Description: Radium isotopes are produced through the decay of thorium in sediments and are soluble in seawater; thus, they are useful for tracing ocean boundary‐derived inputs to the ocean. Here we apply radium isotopes to study continental inputs and water residence times in the Arctic Ocean, where land‐ocean interactions are currently changing in response to rising air and sea temperatures. We present the distributions of radium isotopes measured on the 2015 U.S. GEOTRACES transect in the Western Arctic Ocean and combine this data set with historical radium observations in the Chukchi Sea and Canada Basin. The highest activities of radium‐228 were observed in the Transpolar Drift and the Chukchi shelfbreak jet, signaling that these currents are heavily influenced by interactions with shelf sediments. The ventilation of the halocline with respect to inputs from the Chukchi shelf occurs on time scales of ≤19–23 years. Intermediate water ventilation time scales for the Makarov and Canada Basins were determined to be ~20 and 〉30 years, respectively, while deep water residence times in these basins were on the order of centuries. The radium distributions and residence times described in this study serve as a baseline for future studies investigating the impacts of climate change on the Arctic Ocean.

Description: We thank the captain and crew of the USCGC Healy (HLY1502) and the chief scientists D. Kadko and W. Landing for coordinating a safe and successful expedition. We thank the members of the pump team, P. Lam, E. Black, S. Pike, X. Yang, and M. Heller for their assistance with sample collection and for their unfailingly positive attitudes during this 65‐day expedition. We also appreciate sampling assistance from P. Aguilar and M. Stephens, and MATLAB assistance from B. Corlett, A. Pacini, P. Lin, and M. Li. The radium data from the HLY1502 expedition are available through the Biological & Chemical Oceanography Data Management Office (https://www.bco‐dmo.org/dataset/718440) and the radium measurements from the SHEBA, AWS‐2000, and SBI expeditions can be found in the supporting information. This work was funded by NSF awards OCE‐1458305 to M.A.C., OCE‐1458424 to W.S.M., and PLR‐1504333 to R.S.P. This research was conducted with Government support under and awarded by a DoD, Air Force Office of Scientific Research, National Defense Science and Engineering Graduate (NDSEG) Fellowship awarded to L.E.K., 32 CFR 168a.

Description: 2019-10-26

Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Carter, B. R., Feely, R. A., Wanninkhof, R., Kouketsu, S., Sonnerup, R. E., Pardo, P. C., Sabine, C. L., Johnson, G. C., Sloyan, B. M., Murata, A., Mecking, S., Tilbrook, B., Speer, K., Talley, L. D., Millero, F. J., Wijffels, S. E., Macdonald, A. M., Gruber, N., & Bullister, J. L. Pacific anthropogenic carbon between 1991 and 2017. Global Biogeochemical Cycles, 33(5), (2019):597-617, doi:10.1029/2018GB006154.

Description: We estimate anthropogenic carbon (Canth) accumulation rates in the Pacific Ocean between 1991 and 2017 from 14 hydrographic sections that have been occupied two to four times over the past few decades, with most sections having been recently measured as part of the Global Ocean Ship‐based Hydrographic Investigations Program. The rate of change of Canth is estimated using a new method that combines the extended multiple linear regression method with improvements to address the challenges of analyzing multiple occupations of sections spaced irregularly in time. The Canth accumulation rate over the top 1,500 m of the Pacific increased from 8.8 (±1.1, 1σ) Pg of carbon per decade between 1995 and 2005 to 11.7 (±1.1) PgC per decade between 2005 and 2015. For the entire Pacific, about half of this decadal increase in the accumulation rate is attributable to the increase in atmospheric CO2, while in the South Pacific subtropical gyre this fraction is closer to one fifth. This suggests a substantial enhancement of the accumulation of Canth in the South Pacific by circulation variability and implies that a meaningful portion of the reinvigoration of the global CO2 sink that occurred between ~2000 and ~2010 could be driven by enhanced ocean Canth uptake and advection into this gyre. Our assessment suggests that the accuracy of Canth accumulation rate reconstructions along survey lines is limited by the accuracy of the full suite of hydrographic data and that a continuation of repeated surveys is a critical component of future carbon cycle monitoring.

Description: The data we use can be accessed at CCHDO website (https://cchdo.ucsd.edu/) and GLODAP website (https://www.glodap.info/). This research would not be possible without the hard work of the scientists and crew aboard the many repeated hydrographic cruises coordinated by GO‐SHIP, which is funded by NSF OCE and NOAA OAR. We thank funding agencies and program managers as follows: U.S., Australian, Japanese national science funding agencies that support data collection, data QA/QC, and data centers. Contributions from B. R. C., R. A. F., and R. W. are supported by the National Oceanic and Atmospheric Administration Global Ocean Monitoring and Observing Program (Data Management and Synthesis Grant: N8R3CEA‐PDM managed by Kathy Tedesco and David Legler). G. C. J. is supported by the Climate Observation Division, Climate Program Office, National Oceanic and Atmospheric Administration (NOAA), U.S. Department of Commerce and NOAA Research (fund reference 100007298), grant (N8R1SE3‐PGC). B. M. S was supported by the Australian Government Department of the Environment and CSIRO through the Australian Climate Change Science Programme and by the National Environmental Science Program. N. G. acknowledges support by ETH Zurich. This is JISAO contribution 2018‐0149 and PMEL contribution 4786. We fondly remember John Bullister as a treasured friend, valued colleague, and dedicated mentor, and we thank him for sharing his days with us. He is and will be dearly missed.

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Atmospheres, 124(9), (2019): CP3-4861, doi: 10.1029/2018JD028853.

Description: We investigate the impacts of westward wind events on the Red Sea evaporation using the 35‐year second Modern‐Era Retrospective analysis for Research and Applications reanalysis and a 2‐year‐long record of in situ observations from a heavily instrumented air‐sea interaction mooring. These events are common during boreal winter, and their effects are similar to cold‐air outbreaks that occur in midpolar and subpolar latitudes. They cause extreme heat loss from the sea, which is dominated by latent heat fluxes. Different from cold‐air outbreaks, the intensified heat loss is due to the low relative humidity as we show through latent heat flux decomposition. Rainfall is negligible during these events, and we refer to them as dry‐air outbreaks. We also investigate the general atmospheric circulation pattern that favors their occurrence, which is associated with an intensified Arabian High at the north‐central portion of the Arabian Peninsula—a feature that seems to be an extension of the Siberian High. The analyses reveal that the westward winds over the northern Red Sea and the winter Shamal winds in the Persian Gulf are very likely to be part of the same subsynoptic‐scale feature. The second Modern‐Era Retrospective analysis for Research and Applications reanalysis indicates that the occurrence of westward wind events over the northern Red Sea has grown from 1980 to 2015, especially the frequency of large‐scale events, the cause of which is to be investigated. We hypothesize that dry‐air outbreaks may induce surface water mass transformation in the surface Red Sea Eastern Boundary Current and could represent a significant process for the oceanic thermohaline‐driven overturning circulation.

Description: We thank the three anonymous reviewers and the associated editor who provided valuable comments that contributed to the improvement of the present paper. We wish to acknowledge the use of the Ferret program (NOAA/PMEL) and NCL (doi: 10.5065/D6WD3XH5) for analysis and graphics in this paper. We thanks Julie Hildebrandt for helping with the final manuscript version, Marcio Vianna for fruitful discussion about this work, and Stephen Swift for pointing out the long time series from Yenbo and Wejh at the National Climatic Data Center (NCDC/NOAA). We acknowledge the Global Modeling and Assimilation Office (GMAO) and the Goddard Earth Sciences Data and Information Services Center (GESDISC) for the dissemination of MERRA‐2 reanalysis and the NCDC/NOAA for making the Global Surface Summary of the Day freely and easily available on the internet. MERRA‐2 and QuikSCAT winds at 25 and 12.5 km data are available online (https://disc.gsfc.nasa.gov/datareleases/merra_2_data_release; www.remss.com/missions/qscat/; and https://podaac.jpl.nasa.gov, respectively). The in situ data from the WHOI/KAUST mooring is available at a WHOI repository (http://uop.whoi.edu/projects/kaust/form.php) and provided solely for academic and research purposes. The mooring data collected during the WHOI‐KAUST collaboration was made possible by award USA00001, USA00002, and KSA00011 to the WHOI by the KAUST in the Kingdom of Saudi Arabia. This work was supported by NSF grant OCE‐1435665 and NASA grant NNX14AM71G.

Description: 2019-10-01

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters, 46(9), (2019):4790-4798, doi:10.1029/2019GL081939.

Description: The East Asian Monsoon (EAM) impacts storms, freshwater availability, wind energy production, coal consumption, and subsequent air quality for billions of people across Asia. Despite its importance, the EAM's long‐term behavior is poorly understood. Here we present an annually resolved record of EAM variance from 1584 to 1950 based on radiocarbon content in a coral from the coast of Vietnam. The coral record reveals previously undocumented centennial scale changes in EAM variance during both the summer and winter seasons, with an overall decline from 1600 to the present. Such long‐term variations in monsoon variance appear to reflect independent seasonal mechanisms that are a combination of changes in continental temperature, the strength of the Siberian High, and El Niño–Southern Oscillation behavior. We conclude that the EAM is an important conduit for propagating climate signals from the tropics to higher latitudes.

Description: Thanks go to G. Williams, W. Tak‐Cheung, and J. Ossolinski. Thanks also go to V. Lee, S. H. Ng for coral sampling, and B. Buckley for conversations. This research was supported by the National Research Foundation Singapore NRF Fellowship scheme awarded to N. Goodkin (National Research Fellowship award NRFF‐2012‐03) and administered by the Earth Observatory of Singapore and the Singapore Ministry of Education under the Research Centers of Excellence initiative. The research was also supported by the Singapore Ministry of Education Academic Research Fund Tier 2 (award MOE2016‐T2‐1‐016). Data are available in Table S1 and the NOAA paleoclimate database.

Description: Author Posting. © National Academy of Sciences, 2019. This article is posted here by permission of National Academy of Sciences for personal use, not for redistribution. The definitive version was published in Proceedings of the National Academy of Sciences 116(27), (2019): 13233-13238, doi: 10.1073/pnas.1904087116.

Description: The overturning circulation of the global ocean is critically shaped by deep-ocean mixing, which transforms cold waters sinking at high latitudes into warmer, shallower waters. The effectiveness of mixing in driving this transformation is jointly set by two factors: the intensity of turbulence near topography and the rate at which well-mixed boundary waters are exchanged with the stratified ocean interior. Here, we use innovative observations of a major branch of the overturning circulation—an abyssal boundary current in the Southern Ocean—to identify a previously undocumented mixing mechanism, by which deep-ocean waters are efficiently laundered through intensified near-boundary turbulence and boundary–interior exchange. The linchpin of the mechanism is the generation of submesoscale dynamical instabilities by the flow of deep-ocean waters along a steep topographic boundary. As the conditions conducive to this mode of mixing are common to many abyssal boundary currents, our findings highlight an imperative for its representation in models of oceanic overturning.

Description: The DynOPO project is supported by the UK Natural Environment Research Council (grants NE/K013181/1 and NE/K012843/1) and the US National Science Foundation (grants OCE-1536453 and OCE-1536779). A.C.N.G. acknowledges the support of the Royal Society and the Wolfson Foundation. S.L. acknowledges the support of award NA14OAR4320106 from the National Oceanic and Atmospheric Administration, US Department of Commerce. The statements, findings, conclusions, and recommendations are those of the authors, and do not necessarily reflect the views of the National Oceanic and Atmospheric Administration, or the US Department of Commerce. We are grateful to the scientific party, crew, and technicians on the RRS James Clark Ross for their hard work during data collection.

Description: 2019-12-18

Description: Author Posting. © The Authors, 2018. This is the author's version of the work. It is posted here under a nonexclusive, irrevocable, paid-up, worldwide license granted to WHOI. It is made available for personal use, not for redistribution. The definitive version was published in Putland, R. L., Mackiewicz, A. G., & Mensinger, A. F. Localizing individual soniferous fish using passive acoustic monitoring. Ecological Informatics, 48, (2018):60-68. doi: 10.1016/j.ecoinf.2018.08.004.

Description: Identifying where fish inhabit is a fundamentally important topic in ecology and management allowing acoustically sensitive times and areas to be prioritized. Passive acoustic localization has the benefit of being a non-invasive and non-destructive observational tool, and provides unbiased data on the position and movement of aquatic animals. This study used the time difference of arrivals (TDOA) of sound recordings on a four-hydrophone array to pinpoint the location of male oyster toadfish, Opsanus tau, a cryptic fish that produces boatwhistles to attract females. Coupling the TDOA method with cross correlation of the different boatwhistles, individual toadfish were mapped during dawn (0523–0823), midday (1123–1423), dusk (1723–2023) and night (2323−0223) to examine the relationship between temporal and spatial trends. Seven individual males were identified within 0.5–24.2 m of the hydrophone array and 0.0–18.2 m of the other individuals. Uncertainty in passive acoustics localization was investigated using computer simulations as 〈2.0 m within a bearing of 033 to 148° of the linear hydrophone array. Passive acoustic monitoring is presented as a viable tool for monitoring the positions of soniferous species, like the oyster toadfish. The method used in this study could be applied to a variety of soniferous fishes, without disturbing them or their environment. Understanding the location of fishes can be linked to temporal and environmental parameters to investigate ecological trends, as well as to vessel activity to discuss how individuals' respond to anthropogenic noise.

Description: We would firstly like to thank the anonymous reviewers for providing helpful comments. We thank John Atkins, Mark Johnson and Ben Schlaer for their guidance in the acoustic localization method used and Emily Fleissner for helping to identify toadfish boatwhistles. We also thank Jenni Stanley for help with initial hydrophone set-up and the Marine Resources Center at MBL for dock space and resources. Funding was provided by National Science Foundation grants IOS 1354745, DOB 1359230 and 1659604 awarded to AFM.

Description: 2019-08-13

Description: Author Posting. © The Authors, 2018. This is the author's version of the work. It is posted here under a nonexclusive, irrevocable, paid-up, worldwide license granted to WHOI. It is made available for personal use, not for redistribution. The definitive version was published in Roca-Marti, M., Puigcorbe, V., Friedrich, J., van der Loeff, M. R., Rabe, B., Korhonen, M., Camara-Mor, P., Garcia-Orellana, J., & Masque, P. (2018). Distribution of pb-210 and po-210 in the arctic water column during the 2007 sea-ice minimum: Particle export in the ice-covered basins. Deep-Sea Research Part I-Oceanographic Research Papers, 142, 94-106, doi:10.1016/j.dsr.2018.09.011.

Description: 210Pb and 210Po are naturally occurring radionuclides that are commonly used as a proxy for particle and carbon export. In this study, the distribution of the 210Po/210Pb pair was investigated in the water column of the Barents, Kara and Laptev Seas and the Nansen, Amundsen and Makarov Basins in order to understand the particle dynamics in the Arctic Ocean during the 2007 sea-ice minimum (August-September). Minimum activities of total 210Pb and 210Po were found in the upper and lower haloclines (approx. 60-130 m), which are partly attributed to particle scavenging over the shelves, boundary current transport and subsequent advection of the water with low 210Pb and 210Po activities into the central Arctic. Widespread and substantial (〉50%) deficits of 210Po with respect to 210Pb were detected from surface waters to 200 m on the shelves, but also in the basins. This was particularly important in the Makarov Basin where, despite very low chlorophyll-a levels, estimates of annual new primary production were three times higher than in the Eurasian Basin. In the Nansen, Amundsen and Makarov 32 Basins, estimates of annual new primary production correlated with the deficits of 210Po in the upper 200 m of the water column, suggesting that in situ production and subsequent export of biogenic material were the mechanisms that controlled the removal of 210Po in the central Arctic. Unlike 210Po, 234Th deficits measured during the same expedition were found to be very small and not significant below 25 m in the basins (Cai et al., 2010), which indicates, given the shorter half-life of 234Th, that particle export fluxes in the central Arctic would have been higher before July-August in 2007 than later in the season.

Description: We would like to thank the crew of the R/V Polarstern and the scientists on board for their cooperation during the ARK-XXII/2 expedition. We greatly appreciate the hard work of Oliver Lechtenfeld who collected and processed the samples on board. Thanks to Dorothea Bauch for sharing her results on freshwater origin and Adam Ulfsbo for providing insightful comments on the estimates of primary production. This project was partly supported by the Ministerio de Ciencia e Innovación (CTM2011-28452, Spain). We wish to acknowledge the support of the Generalitat de Catalunya to the research group MERS (2017 SGR-1588). This work is contributing to the ICTA ‘Unit of Excellence’ (MinECo, MDM2015-0552). M.R.-M. was supported by a Spanish PhD fellowship (AP2010-2510) and an Australian postdoctoral fellowship (2017 Endeavour Research Fellowship).

Description: 2019-10-22

Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Isotopic constraints on nitrogen transformation rates in the deep sedimentary marine biosphere. Global Biogeochemical Cycles, 32, (2018):1688–1702., doi: 10.1029/2018GB005948.

Description: Little is known about the nature of microbial community activity contributing to the cycling of nitrogen in organic-poor sediments underlying the expansive oligotrophic ocean gyres. Here we use pore water concentrations and stable N and O isotope measurements of nitrate and nitrite to constrain rates of nitrogen cycling processes over a 34-m profile from the deep North Atlantic spanning fully oxic to anoxic conditions. Using a 1-D reaction-diffusion model to predict the distribution of nitrogen cycling rates, results converge on two distinct scenarios: (1) an exceptionally high degree of coupling between nitrite oxidation and nitrate reduction near the top of the anoxic zone or (2) an unusually large N isotope effect (~60‰) for nitrate reduction that is decoupled from the corresponding O isotope effect, which is possibly explained by enzyme-level interconversion between nitrite and nitrate.

Description: Samples analyzed for this study were collected during the final expedition of the RV Knorr, KN223. The expedition would not have been possible without the captain and crew of the RV Knorr and the efforts of the shipboard science party. We would like to acknowledge Robert Pockalny for planning and facilitating the expedition. Inorganic geochemistry sample collection, processing, and analysis were performed shipboard by Arthur Spivack,Dennis Graham, Chloe Anderson, Emily Estes, Kira Homola, Claire McKinley, Theodore Present, and Justine Sauvage. Coring capabilities were provided by the Oregon State University and Woods Hole Oceanographic Institute Coring Facilities, directed and funded by the U. S. National Science Foundation (NSF) Ship Facilities Program. The cored materials and discrete samples from the expedition are curated and stored by the Marine Geological Samples Laboratory at the University of Rhode Island, codirected by Rebecca Robinson and Katherine Kelly and funded by the NSF Ocean Sciences Division. The nutrient and isotope data from pore waters in this study will be available at The Biological and Chemical Data Management Office (https://www.bcodmo.org/project/567401). This project was partially funded by an NSF CDEBI postdoctoral fellowship to C. Buchwald. Portions of this material are based upon work supported while R. W. M. was serving at the National Science Foundation.

Description: 2019-04-18

Description: The Aurelian Mammal Age for peninsular Italy was introduced on the basis of faunal assemblages mainly recovered at sites along the Via Aurelia west of Rome. These sites exposed a set of sedimentary deposits currently attributed to the Aurelia and to the Vitinia Formations correlated with MIS 9 and MIS 7, respectively. In the present paper we reconstruct the geologic-stratigraphic setting in the western sector of Rome within the wider context of glacio-eustatically controlled, geochronologically constrained aggradational successions defined for this region. We present a chronostratigraphic study based on dedicated field surveys, that, combined with five new 40Ar/39Ar ages and eighteen trace-element and EMP glass analyses of volcanic products, allow us to revise age and correlation with the Marine Isotopic Stages for 10 sites out of 12 previously attributed to the Aurelia Formation and the Torre in Pietra Faunal Unit. In particular, we demonstrate a MIS 13/MIS 11 age for several sections along the Via Aurelia between Malagrotta and Castel di Guido. Based on this new geochronological framework, the first occurrences of Canis lupus and Vulpes vulpes in Italy are antedated to MIS 11, within the Fontana Ranuccio Faunal Unit of the Galerian Mammal Age, consistent with the wider European context. This contribution is intended as the groundwork for a revision of the Middle Pleistocene Mammal Ages of the Italian peninsula, according to the improved chronostratigraphy of the geologic sections hosting the faunal assemblages.

Description: Published

Description: 173-199

Description: 5A. Paleoclima e ricerche polari

Description: JCR Journal

Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Luis, K. M. A., Rheuban, J. E., Kavanaugh, M. T., Glover, D. M., Wei, J., Lee, Z., & Doney, S. C. Capturing coastal water clarity variability with Landsat 8. Marine Pollution Bulletin, 145, (2019): 96-104, doi: 10.1016/j.marpolbul.2019.04.078.

Description: Coastal water clarity varies at high temporal and spatial scales due to weather, climate, and human activity along coastlines. Systematic observations are crucial to assessing the impact of water clarity change on aquatic habitats. In this study, Secchi disk depths (ZSD) from Boston Harbor, Buzzards Bay, Cape Cod Bay, and Narragansett Bay water quality monitoring organizations were compiled to validate ZSD derived from Landsat 8 (L8) imagery, and to generate high spatial resolution ZSD maps. From 58 L8 images, acceptable agreement was found between in situ and L8 ZSD in Buzzards Bay (N = 42, RMSE = 0.96 m, MAPD = 28%), Cape Cod Bay (N = 11, RMSE = 0.62 m, MAPD = 10%), and Narragansett Bay (N = 8, RMSE = 0.59 m, MAPD = 26%). This work demonstrates the value of merging in situ ZSD with high spatial resolution remote sensing estimates for improved coastal water quality monitoring.

Description: This work was supported by the John D. and Catherine T. MacArthur Foundation (grant 14-106159-000-CFP) and by the National Science Foundation grant DGE 1249946, Integrative Graduate Education and Research Traineeship (IGERT): Coasts and Communities – Natural and Human Systems in Urbanizing Environments. Lastly, we are indebted to the Massachusetts Water Resources Authority, Buzzards Bay Coalition, Provincetown Center for Coastal Studies, Narragansett Bay Commission, and the numerous citizen scientists responsible for collecting the in situ measurements used in this study. Comments and suggestions from our anonymous reviewer were greatly appreciated.

Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Zeigler, S. L., Gutierrez, B. T., Sturdivant, E. J., Catlin, D. H., Fraser, J. D., Hecht, A., Karpanty, S. M., Plant, N. G., & Thieler, E. R. Using a Bayesian network to understand the importance of coastal storms and undeveloped landscapes for the creation and maintenance of early successional habitat. Plos One, 14(7), (2019): e0209986, doi:10.1371/journal.pone.0209986.

Description: Coastal storms have consequences for human lives and infrastructure but also create important early successional habitats for myriad species. For example, storm-induced overwash creates nesting habitat for shorebirds like piping plovers (Charadrius melodus). We examined how piping plover habitat extent and location changed on barrier islands in New York, New Jersey, and Virginia after Hurricane Sandy made landfall following the 2012 breeding season. We modeled nesting habitat using a nest presence/absence dataset that included characterizations of coastal morphology and vegetation. Using a Bayesian network, we predicted nesting habitat for each study site for the years 2010/2011, 2012, and 2014/2015 based on remotely sensed spatial datasets (e.g., lidar, orthophotos). We found that Hurricane Sandy increased piping plover habitat by 9 to 300% at 4 of 5 study sites but that one site saw a decrease in habitat by 27%. The amount, location, and longevity of new habitat appeared to be influenced by the level of human development at each site. At three of the five sites, the amount of habitat created and the time new habitat persisted were inversely related to the amount of development. Furthermore, the proportion of new habitat created in high-quality overwash was inversely related to the level of development on study areas, from 17% of all new habitat in overwash at one of the most densely developed sites to 80% of all new habitat at an undeveloped site. We also show that piping plovers exploited new habitat after the storm, with 14–57% of all nests located in newly created habitat in the 2013 breeding season. Our results quantify the importance of storms in creating and maintaining coastal habitats for beach-nesting species like piping plovers, and these results suggest a negative correlation between human development and beneficial ecological impacts of these natural disturbances.

Description: Funding for this work was provided through a U.S. Geological Survey Mendenhall Post-Doctoral Fellowship awarded to S. Zeigler, with funding for this fellowship made through a grant to E.R. Thieler from the North Atlantic Landscape Conservation Cooperative. Funders did not play a role in study design, data collection or analysis, decision to publish, or preparation of the manuscript.

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 46(12), (2019): 6786-6795, doi:10.1029/2019GL082075.

Description: Denitrification in the anoxic sediments of the Santa Barbara Basin has been well documented in the historic and modern record, but the regulation of and frequency with which denitrification occurs in the overlying water column are less understood. Since 2004, the magnitude and speciation of redox active nitrogen species in bottom waters have changed markedly. Most notable are periods of decreased nitrate and increased nitrite concentrations. Here we examine these changes in nitrogen cycling as recorded by the stable isotopes of dissolved nitrate from 2010–2016. When compared to previous studies, our data identify an increase in water column denitrification in the bottom waters of the basin. Observations from inside the basin as well as data from the wider California Current Ecosystem implicate a long‐term trend of decreasing oxygen concentrations as the driver for these observed changes, with ramifications for local benthic communities and regional nitrogen loss.

Description: We thank CalCOFI and Shonna Dovel for sample collection and two anonymous reviewers for improving the manuscript. Thanks also to Daniel Sigman for useful discussions, and Zoe Sandwith and Jen Karolewski for help with sample analysis. Data sets presented here were supported in part by CCE‐LTER augmented funding (NSF grant OCE‐1026607). Additional funding came from the Edna Bailey Sussman Foundation and the San Diego Foundation Blasker Environment grant. All data can be accessed at http://calcofi.org and https://oceaninformatics.ucsd.edu/datazoo/catalogs/ccelter/datasets. SDW acknowledges the support of a fellowship through the Hanse‐Wissenschaftskolleg (Institute for Advanced Studies).

Description: 2019-12-11

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Reviews of Geophysics 57(2), (2019): 316-375, doi:10.1029/2019RG000644.

Description: By synthesizing recent studies employing a wide range of approaches (modern observations, paleo reconstructions, and climate model simulations), this paper provides a comprehensive review of the linkage between multidecadal Atlantic Meridional Overturning Circulation (AMOC) variability and Atlantic Multidecadal Variability (AMV) and associated climate impacts. There is strong observational and modeling evidence that multidecadal AMOC variability is a crucial driver of the observed AMV and associated climate impacts and an important source of enhanced decadal predictability and prediction skill. The AMOC‐AMV linkage is consistent with observed key elements of AMV. Furthermore, this synthesis also points to a leading role of the AMOC in a range of AMV‐related climate phenomena having enormous societal and economic implications, for example, Intertropical Convergence Zone shifts; Sahel and Indian monsoons; Atlantic hurricanes; El Niño–Southern Oscillation; Pacific Decadal Variability; North Atlantic Oscillation; climate over Europe, North America, and Asia; Arctic sea ice and surface air temperature; and hemispheric‐scale surface temperature. Paleoclimate evidence indicates that a similar linkage between multidecadal AMOC variability and AMV and many associated climate impacts may also have existed in the preindustrial era, that AMV has enhanced multidecadal power significantly above a red noise background, and that AMV is not primarily driven by external forcing. The role of the AMOC in AMV and associated climate impacts has been underestimated in most state‐of‐the‐art climate models, posing significant challenges but also great opportunities for substantial future improvements in understanding and predicting AMV and associated climate impacts.

Description: We thank the joint support from the US AMOC Science Team and the U.K.‐U.S. RAPID program for this review paper. The HADISST data set used in Figure 2 can be downloaded from https://www.metoffice.gov.uk/hadobs/hadisst/data/download.html. Y. ‐O. K. is supported by the National Science Foundation (NSF; OCE‐1242989) and Department of Energy (DE‐SC0019492). S. G. Y. is partially supported by the NSF Collaborative Research EaSM2 grant OCE‐1243015. G. D. and S. G. Y. are supported by the National Center for Atmospheric Research, which is a major facility sponsored by the National Science Foundation under Cooperative Agreement 1852977. D. E. A. was supported by an NSF postdoctoral fellowship. We would like to thank Ulysses Ninnemann and Nil Irvali for providing Figure 19. We thank Mike Winton and Xiaoqin Yan for the internal review of the manuscript.

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(7), (2019): 5067-5084, doi: 10.1029/2018JC014688.

Description: Changes in the rate of ocean‐driven basal melting of Antarctica's ice shelves can alter the rate at which the grounded ice sheet loses mass and contributes to sea level change. Melt rates depend on the inflow of ocean heat, which occurs through steady circulation and eddy fluxes. Previous studies have demonstrated the importance of eddy fluxes for ice shelves affected by relatively warm intrusions of Circumpolar Deep Water. However, ice shelves on cold water continental shelves primarily melt from dense shelf water near the grounding line and from light surface water at the ice shelf front. Eddy effects on basal melt of these ice shelves have not been studied. We investigate where and when a regional ocean model of the Ross Sea resolves eddies and determine the effect of eddy processes on basal melt. The size of the eddies formed depends on water column stratification and latitude. We use simulations at horizontal grid resolutions of 5 and 1.5 km and, in the 1.5‐km model, vary the degree of topography smoothing. The higher‐resolution models generate about 2–2.5 times as many eddies as the low‐resolution model. In all simulations, eddies cross the ice shelf front in both directions. However, there is no significant change in basal melt between low‐ and high‐resolution simulations. We conclude that higher‐resolution models (〈1 km) are required to better represent eddies in the Ross Sea but hypothesize that basal melt of the Ross Ice Shelf is relatively insensitive to our ability to fully resolve the eddy field.

Description: This research was funded by NSF's Antarctic Research Program (ANT‐0944174, ANT‐0944165, and ANT‐1443677), Ocean Sciences Program (OCE‐1357522), and by the Future of Ice Initiative at the University of Washington. It was supported by the Turing High Performance Computing Cluster at Old Dominion University. S. M. acknowledges the support of her dissertation committee. Portions of this work appear in S. M.'s PhD thesis. The eddy tracking code and specific version of ROMS are on S. M.'s github (https://github.com/mnemoniko). Forcing files to run the simulations described are in three separate records on zenodo.org under DOIs 10.5281/zenodo.2649541, 10.5281/zenodo.2649547, and 10.5281/zenodo.2650294. We thank three anonymous reviewers for their helpful suggestions.

Description: 2020-01-04

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Solid Earth 124(7), (2019): 6625-6652, doi: 10.1029/2019JB017611.

Description: The Southeastern United States is an ideal location to understand the interactions between mountain building, rifting, and magmatism. Line 2 of the Suwannee suture and Georgia Rift basin refraction seismic experiment in eastern Georgia extends 420 km from the Inner Piedmont to the Georgia coast. We model crustal and upper mantle VP and upper crustal VS. The most dramatic model transition occurs at the Higgins‐Zietz magnetic boundary, north of which we observe higher upper crustal VP and VS and lower VP/VS. These observations support the interpretation of the Higgins‐Zietz boundary as the Alleghanian suture. North of this boundary, we observe a low‐velocity zone less than 2 km thick at ~5‐km depth, consistent with a layer of sheared metasedimentary rocks that forms the Appalachian detachment. To the southeast, we interpret synrift sediments and decreasing crustal thickness to represent crustal thinning associated with the South Georgia Rift Basin and subsequent continental breakup. The correspondence of the northern limit of thinning with the interpreted suture location suggests that the orogenic suture zone and/or the Gondwanan crust to the south of the suture helped localize subsequent extension. Lower crustal VP and VP/VS preclude volumetrically significant mafic magmatic addition during rifting or associated with the Central Atlantic Magmatic Province. Structures formed during orogenesis and/or extension appear to influence seismicity in Georgia today; earthquakes localize along a steeply dipping zone that coincides with the northern edge of the South Georgia Basin and the change in upper crustal velocities at the Higgins‐Zietz boundary.

Description: The SUGAR experiment would not have been possible without the help of local landowners, county and state officials, the University of Texas El Paso seismic source facility, IRIS PASSCAL instrument center, and the team of students who scouted, deployed, and recovered the geophones. We thank Jim Knapp, Susie Boote, and Ross Cao for helpful discussion and providing the sonic log data from GGS‐3080; Lindsay Worthington for discussion and sharing codes; Bradley Hacker and Mark Behn for sharing their lower crust velocity constraints; Emily Hopper and Karen Fischer for discussions; and Fred Cook for an image of processed COCORP data. We used the PyVM toolbox from Nathan Miller, the VMTomo code from Alistair Harding for tomographic inversions, VMTomo code from Harm van Avendonk for resolution tests, and the Upicker package of MATLAB scripts maintained by W. Wilcock to pick arrivals. Seismic Unix was used for data processing (Cohen & Stockwell, 2002). This project was funded by an NSF GRFP fellowship DGE 16‐44869 and a grant from the National Science Foundation's Division of Earth Sciences (NSF‐EAR) EarthScope program through the collaborative awards EAR‐1144534, EAR‐1144829, and EAR‐1144391. Robert Hawman and two anonymous reviewers provided thorough feedback that improved this manuscript. The refraction seismic data set analyzed in the current study is available on request through the IRIS Data Management Center, report number 14‐023 (http://ds.iris.edu/ds/nodes/dmc/forms/assembled‐data/). The velocity model grid files and arrival picks are available in the supporting information.

Description: 2019-12-24

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(3), (2019):2072-2087, doi:10.1029/2018JC014586.

Description: Infragravity waves have received the least study of any class of waves in the deep ocean. This paper analyzes a 389‐day‐long deep ocean pressure record from the Hawaii Ocean Mixing Experiment for the presence of narrowband (≲2 μHz) components and nonstationarity over 400–4,000 μHz using a combination of fitting a mixture noncentral/central χ2 model to spectral estimates, high‐resolution multitaper spectral estimation, and computation of the offset coherence between distinct frequencies for a given data segment. In the frequency band 400–1,000 μHz there is a noncentral fraction of 0.67 ± 0.07 that decreases with increasing frequency. Evidence is presented for the presence of tidal harmonics in the data over the 400‐ to 1,400‐μHz bands. Above ~2,000 μHz the noncentral fraction rises with frequency, comprising about one third of the spectral estimates over 3,000–4,000 μHz. The power spectrum exhibits frequent narrowband peaks at 6–11 standard deviations above the noise level. The widths of the peaks correspond to a Q of at least 1,000, vastly exceeding that of any oceanic or atmospheric process. The offset coherence shows that the spectral peaks have substantial (p = 0.99–0.9999) interfrequency correlation, both locally and between distinct peaks within a given analysis band. Many of the peak frequencies correspond to the known values for solar pressure modes that have previously been observed in solar wind and terrestrial data, while others are the result of nonstationarity that distributes power across frequency. Overall, this paper documents the existence of two previously unrecognized sources of infragravity wave variability in the deep ocean.

Description: This work was supported at WHOI by an Independent Research and Development award and the Walter A. and Hope Noyes Smith Chair for Excellence in Oceanography. At the University of Hawaii, Martin Guiles provided a number of consequential data analyses, and work was supported by NSF‐OCE1460022. D. J. T. acknowledges support from Queen's University and NSERC. The data used in this study are available from the supporting information.

Description: 2019-08-20

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters, 46(9), (2019):4894-4903, doi:10.1029/2019GL082015.

Description: The largest contributor to the planetary energy imbalance is well‐mixed greenhouse gases (GHGs), which are partially offset by poorly mixed (and thus northern midlatitude dominated) anthropogenic aerosols (AAs). To isolate the effects of GHGs and AAs, we analyze data from the CMIP5 historical (i.e., all natural and anthropogenic forcing) and single forcing (GHG‐only and AA‐only) experiments. Over the duration of the historical experiment (1861–2005) excess heat uptake at the top of the atmosphere and ocean surface occurs almost exclusively in the Southern Hemisphere, with AAs canceling the influence of GHGs in the Northern Hemisphere. This interhemispheric asymmetry in surface heat uptake is eliminated by a northward oceanic transport of excess heat, as there is little hemispheric difference in historical ocean heat storage after accounting for ocean volume. Data from the 1pctCO2 and RCP 8.5 experiments suggests that the future storage of excess heat will be skewed toward the Northern Hemisphere oceans.

Description: We acknowledge the World Climate Research Programme's Working Group on Coupled Modelling, which is responsible for CMIP, and we thank the climate modeling groups for producing and making available their model output. CMIP data can be accessed at the ESGF website (https://esgfnode.llnl.gov/projects/esgfllnl/). For CMIP the U.S. Department of Energy's Program for Climate Model Diagnosis and Intercomparison provides coordinating support and led development of software infrastructure in partnership with the Global Organization for Earth System Science Portals. We also thank Paola Petrelli from the ARC Centre of Excellence for Climate Extremes, for her assistance with downloading/managing the CMIP5 data archive at the National Computational Infrastructure.

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters, 46(10), (2019): 5351-5360, doi: 10.1029/2019GL083073.

Description: Monthly observations are used to study the relationship between the Atlantic meridional overturning circulation (AMOC) at 26° N and sea level (ζ) on the New England coast (northeastern United States) over nonseasonal timescales during 2004–2017. Variability in ζ is anticorrelated with AMOC on intraseasonal and interannual timescales. This anticorrelation reflects the stronger underlying antiphase relationship between ageostrophic Ekman‐related AMOC transports due to local zonal winds across 26° N and ζ changes arising from local wind and pressure forcing along the coast. These distinct local atmospheric variations across 26° N and along coastal New England are temporally correlated with one another on account of large‐scale atmospheric teleconnection patterns. Geostrophic AMOC contributions from the Gulf Stream through the Florida Straits and upper‐mid‐ocean transport across the basin are together uncorrelated with ζ. This interpretation contrasts with past studies that understood ζ and AMOC as being in geostrophic balance with one another.

Description: This work was supported by NSF awards OCE‐1558966, OCE‐1834739, and OCE‐1805029; NASA contract NNH16CT01C; and the J. Lamar Worzel Assistant Scientist Fund and the Penzance Endowed Fund in Support of Assistant Scientists at the Woods Hole Oceanographic Institution. Helpful comments from Magdalena Andres and two anonymous reviewers are acknowledged. Tide‐gauge sea level data were provided by the Permanent Service for Mean Sea Level (www.psmsl.org). Observations of the overturning circulation were taken from the RAPID data download page (www.rapid.ac.uk/data.php). Time series of the North Atlantic Oscillation and Arctic Oscillation were downloaded from the National Oceanic and Atmospheric Administration Earth System Research Laboratory Physical Sciences Division website (www.esrl.noaa.gov/psd/). Reanalysis wind stress and air pressure fields were provided by the Community Storage Server at Woods Hole Oceanographic Institution (http://cmip5.whoi.edu/).

Description: 2019-11-01

Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Chelton, D. B., Schlax, M. G., Samelson, R. M., Farrar, J. T., Molemaker, M. J., McWilliams, J. C., & Gula, J. Prospects for future satellite estimation of small-scale variability of ocean surface velocity and vorticity. Progress in Oceanography, 173, (2019):256-350, doi:0.1016/j.pocean.2018.10.012.

Description: Recent technological developments have resulted in two techniques for estimating surface velocity with higher resolution than can be achieved from presently available nadir altimeter data: (1) Geostrophically computed estimates from high-resolution sea surface height (SSH) measured interferometrically by the wide-swath altimeter on the Surface Water and Ocean Topography (SWOT) Mission with a planned launch in 2021; and (2) Measurements of ocean surface velocity from a Doppler scatterometer mission that is in the early planning stages, referred to here as a Winds and Currents Mission (WaCM). In this study, we conduct an analysis of the effects of uncorrelated measurement errors and sampling errors on the errors of the measured and derived variables of interest (SSH and geostrophically computed velocity and vorticity for SWOT, and surface velocity and vorticity for WaCM). Our analysis includes derivations of analytical expressions for the variances and wavenumber spectra of the errors of the derived variables, which will be useful to other studies based on simulated SWOT and WaCM estimates of velocity and vorticity. We also discuss limitations of the geostrophic approximation that must be used for SWOT estimates of velocity. The errors of SWOT and WaCM estimates of velocity and vorticity at the full resolutions of the measured variables are too large for the unsmoothed estimates to be scientifically useful. It will be necessary to smooth the data to reduce the noise variance. We assess the resolution capabilities of smoothed estimates of velocity and vorticity from simulated noisy SWOT and WaCM data based on a high-resolution model of the California Current System (CCS). By our suggested minimum threshold signal-to-noise (S/N) variance ratio of 10 (a standard deviation ratio of 3.16), we conclude that the wavelength resolution capabilities of maps of velocity and vorticity constructed from WaCM data with a swath width of 1200 km are, respectively, about 60 km and 90 km in 4-day averages. For context, the radii of resolvable features are about four times smaller than these mesoscale wavelength resolutions. If the swath width can be increased to 1800 km, the wavelength resolution capabilities of 4-day average maps of surface velocity and vorticity would improve to about 45 km and 70 km, respectively. Reducing the standard deviation of the uncorrelated measurement errors from the baseline value of m s−1 to a value of 0.25 m s−1 would further improve these resolution capabilities to about 20 km and 45 km. SWOT data will allow mapping of the SSH field with far greater accuracy and space–time resolution than are presently achieved by merging the data from multiple nadir altimeter missions. However, because of its much narrower 120-km measurement swath compared with WaCM and the nature of the space–time evolution of the sampling pattern during each 21-day repeat of the SWOT orbit, maps of geostrophically computed velocity and vorticity averaged over the 14-day period that is required for SWOT to observe the full CCS model domain are contaminated by sampling errors that are too large for the estimates to be useful for any amount of smoothing considered here. Reducing the SSH measurement errors would do little to improve SWOT maps of velocity and vorticity. SWOT estimates of these variables are likely to be useful only within individual measurement swaths or with the help of dynamic interpolation from a data assimilation model. By our criterion, in-swath SWOT estimates of velocity and vorticity have wavelength resolution capabilities of about 30 km and 55 km, respectively. In comparison, in-swath estimates of velocity and vorticity from WaCM data with m s−1 have a wavelength resolution capability of about 130 km for both variables. Reducing the WaCM measurement errors to m s−1 would improve the resolution capabilities to about 50 km and 75 km for velocity and vorticity, respectively. These resolutions are somewhat coarser than the in-swath estimates from SWOT data, but the swath width is more than an order of magnitude wider for WaCM. Instantaneous maps of velocity and vorticity constructed in-swath from WaCM data will therefore be much less prone to edge effect problems in the spatially smoothed fields. Depending on the precise value of the threshold adopted for the minimum S/N ratio and on the details of the filter used to smooth the SWOT and WaCM data, the resolution capabilities summarized above may be somewhat pessimistic. On the other hand, aspects of measurement errors and sampling errors that have not been accounted for in this study will worsen the resolution capabilities presented here. Another caveat to keep in mind is that the resolution capabilities deduced here from simulations of the CCS region during summertime may differ somewhat at other times of year and in other geographical regions where the signal variances and wavenumber spectra of the variables of interest differ from the CCS model used in this study. Our analysis nonetheless provides useful guidelines for the resolutions that can be expected from SWOT and WaCM.

Description: We thank Ralph Milliff, Bo Qiu, Ernesto Rodríguez and Lee-Lueng Fu for many helpful editorial comments and suggestions that improved the manuscript. This research was funded by NASA Grants NNX13AD78G, NNX14AM72G, NNX13AE32G, NNX14AM66G, NNX16AH76G,NNX14AM71G and NNX17AH54G. The two North Atlantic Ocean simulations in this study were performed using HPC resources from GENCI-TGCC with support from Grant 2017-A0010107638 for Jonathan Gula.

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Solid Earth 124(2), (2019):1889-1909, doi:10.1029/2018JB016451.

Description: Plate formation and evolution processes are predicted to generate upper mantle seismic anisotropy and negative vertical velocity gradients in oceanic lithosphere. However, predictions for upper mantle seismic velocity structure do not fully agree with the results of seismic experiments. The strength of anisotropy observed in the upper mantle varies widely. Further, many refraction studies observe a fast direction of anisotropy rotated several degrees with respect to the paleospreading direction, suggesting that upper mantle anisotropy records processes other than 2‐D corner flow and plate‐driven shear near mid‐ocean ridges. We measure 6.0 ± 0.3% anisotropy at the Moho in 70‐Ma lithosphere in the central Pacific with a fast direction parallel to paleospreading, consistent with mineral alignment by 2‐D mantle flow near a mid‐ocean ridge. We also find an increase in the strength of anisotropy with depth, with vertical velocity gradients estimated at 0.02 km/s/km in the fast direction and 0 km/s/km in the slow direction. The increase in anisotropy with depth can be explained by mechanisms for producing anisotropy other than intrinsic effects from mineral fabric, such as aligned cracks or other structures. This measurement of seismic anisotropy and gradients reflects the effects of both plate formation and evolution processes on seismic velocity structure in mature oceanic lithosphere, and can serve as a reference for future studies to investigate the processes involved in lithospheric formation and evolution.

Description: We thank the Captain and crew of the R/V Marcus G. Langseth and the engineers and technicians from the Scripps Institution of Oceanography and the Woods Hole Oceanographic Institution, who provided the instruments through the National Science Foundation's Ocean Bottom Seismograph Instrument Pool (OBSIP). The professionalism and expertise of these individuals were key to the success of this experiment. We also thank Donna Blackman, Tom Brocher, Philip Skemer, and an anonymous reviewer for their thoughtful comments which greatly improved this paper. The OBS data described here are archived at the IRIS Data Management Center (http://www.iris.edu) under network code ZA 2011–2013. The travel time picks are archived in the Marine‐Geo Digital Library (http://www.marine‐geo.org/library/) with the DOI 10.1594/IEDA/324643. This work was supported by NSF grant OCE‐0928663 to D. Lizarralde, J. Collins, and R. Evans; NSF grant OCE‐0927172 to G. Hirth; NSF grant OCE‐0928270 to J. Gaherty; and an NSF Graduate Research Fellowship to H. Mark.

Description: 2019-07-28

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Solid Earth 142(2), (2019):1430-1442, doi:10.1029/2018JB016899.

Description: We report an experimental investigation of the electrical properties of natural polycrystalline lawsonite from Reed Station, CA. Lawsonite represents a particularly efficient water reservoir in subduction contexts, as it can carry about 12 wt % water and is stable over a wide pressure range. Experiments were performed from 300 to about 1325 °C and under pressure from 1 to 10 GPa using a multi‐anvil apparatus. We observe that temperature increases lawsonite conductivity until fluids escape the cell after dehydration occurs. At a fixed temperature of 500 °C, conductivity measurements during compression indicate electrical transitions at about 4.0 and 9.7 GPa that are consistent with crystallographic transitions from orthorhombic C to P and from orthorhombic to monoclinic systems, respectively. Comparison with lawsonite structure studies indicates an insignificant temperature dependence of these crystallographic transitions. We suggest that lawsonite dehydration could contribute to (but not solely explain) high conductivity anomalies observed in the Cascades by releasing aqueous fluid at a depth (~50 km) consistent with the basalt‐eclogite transition. In subduction settings where the incoming plate is older and cooler (e.g., Japan), lawsonite remains stable to great depth. In these cooler settings, lawsonite could represent a vehicle for deep water transport and the subsequent triggering of melt that would appear electrically conductive, though it is difficult to uniquely identify the contributions from lawsonite on field electrical profiles in these more deep‐seated domains.

Description: A. P. acknowledges financial support from UCSD‐SIO startup funds, NSF‐EAR Petrology and Geochemistry (grant 1551200), and NSF‐COMPRES IV EOID subaward. The use of the COMPRES Cell Assembly Project was also supported by COMPRES under NSF Cooperative Agreement EAR 1661511. Q. W. acknowledges support from NSF EAR‐1620423. We thank Kurt Leinenweber for fruitful discussion, Jake Perez for technical help in the lab, and Sabine Faulhaber (UCSD Nano‐Engineering Department) for technical assistance with SEM images and EDS analyses. We also thank two reviewers for detailed comments that improved the manuscript. All the electrical data used for Figures 4 and 5 are available in the supporting information.

Description: 2019-08-27

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(3), (2019): 1679-1698, doi:10.1029/2018JC014759.

Description: The characteristics and seasonality of the Svalbard branch of the Atlantic Water (AW) boundary current in the Eurasian Basin are investigated using data from a six‐mooring array deployed near 30°E between September 2012 and September 2013. The instrument coverage extended to 1,200‐m depth and approximately 50 km offshore of the shelf break, which laterally bracketed the flow. Averaged over the year, the transport of the current over this depth range was 3.96 ± 0.32 Sv (1 Sv = 106 m3/s). The transport within the AW layer was 2.08 ± 0.24 Sv. The current was typically subsurface intensified, and its dominant variability was associated with pulsing rather than meandering. From late summer to early winter the AW was warmest and saltiest, and its eastward transport was strongest (2.44 ± 0.12 Sv), while from midspring to midsummer the AW was coldest and freshest and its transport was weakest (1.10 ± 0.06 Sv). Deep mixed layers developed through the winter, extending to 400‐ to 500‐m depth in early spring until the pack ice encroached the area from the north shutting off the air‐sea buoyancy forcing. This vertical mixing modified a significant portion of the AW layer, suggesting that, as the ice cover continues to decrease in the southern Eurasian Basin, the AW will be more extensively transformed via local ventilation.

Description: We are grateful to the crew of the R/V Lance for the collection of the data. The U.S. component of A‐TWAIN was funded by the National Science Foundation under grant ARC‐1264098 as well as a grant from the Steven Grossman Family Foundation. The Norwegian component of A‐TWAIN was funded by the “Arctic Ocean” flagship program at the Fram Centre. The data used in this study are available at http://atwain.whoi.edu and data.npolar.no (Sundfjord et al., 2017). The data from Fram Strait are available at https://doi.pangaea.de/10.1594/PANGAEA.853902

Description: 2019-08-15

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(2), (2019):863-881, doi:10.1029/2018JC014604.

Description: Pacific Winter Water (PWW) enters the western Arctic Ocean from the Chukchi Sea; however, the physical mechanisms that regulate its circulation within the deep basin are still not clear. Here, we investigate the interannual variability of PWW with a comprehensive data set over a decade. We quantify the thickening and expansion of the PWW layer during 2002–2016, as well as its changing pathway. The total volume of PWW in the Beaufort Gyre (BG) region is estimated to have increased from 3.48 ± 0.04 × 1014 m3 during 2002–2006 to 4.11 ± 0.02 × 1014 m3 during 2011–2016, an increase of 18%. We find that the deepening rate of the lower bound of PWW is almost double that of its upper bound in the northern Canada Basin, a result of lateral flux convergence of PWW (via lateral advection of PWW from the Chukchi Borderland) in addition to the Ekman pumping. In particular, of the 70‐m deepening of PWW at its lower bound observed over 2003–2011 in the northwestern basin, 43% resulted from lateral flux convergence. We also find a redistribution of PWW in recent years toward the Chukchi Borderland associated with the wind‐driven spin‐up and westward shift of the BG. Finally, we hypothesize that a recently observed increase of lower halocline eddies in the BG might be explained by this redistribution, through a compression mechanism over the Chukchi Borderland.

Description: Three anonymous reviewers provided helpful comments and suggestions, which greatly improved this manuscript. We thank John Marshall (MIT) and Georgy Manucharyan (Caltech) for valuable discussions and inputs. We thank Peigen Lin (WHOI), Qinyu Liu, and Jinping Zhao (OUC) for helpful discussions. The Matlab wind rose toolbox is written by Daniel Pereira. This study is supported by the National Key Basic Research Program of China (Program 973) (2015CB953900; 2018YFA0605901), the Key Project of Chinese Natural Science Foundation (41330960), and the National Natural Science Foundation of China (41706211 and 41776192), the Office of Naval Research (grant N00014‐12‐1‐0112), the NSF Office of Polar Programs (PLR‐1416920, PLR‐1503298, PLR‐1602985, PLR‐1603259, ARC‐1203425, and NSF‐1602926). Wenli Zhong (201606335011) is supported by the China Scholarship Council for his studies in APL. We appreciate Andrey Proshutinsky and Rick Krishfield (WHOI) for providing the Beaufort Gyre Exploration Project data publicly at http://www.whoi.edu/website/beaufortgyre/. The Ice‐Tethered Profiler data were collected and made available by the Ice‐Tethered Profiler Program (Krishfield et al., 2008; Toole et al., 2011) based at the Woods Hole Oceanographic Institution (http://www.whoi.edu/itp). The Monthly Isopycnal/Mixed‐layer Ocean Climatology (MIMOC) data are available at https://www.pmel.noaa.gov/mimoc/. The monthly Arctic Dynamic Ocean Topography data are distributed by CPOM (http://www.cpom.ucl.ac.uk/dynamic_topography/). The IBCAO Bathymetry data are available from NASA (http://www.ngdc.noaa.gov/mgg/bathymetry/arctic/arctic.html). The Data‐Interpolating Variational Analysis method is publicly available at http://modb.oce.ulg.ac.be/mediawiki/index.php/DIVA.

Description: 2019-07-16

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(2), (2019):821-843, doi:10.1029/2018JC014568.

Description: Shifting baselines in the Arctic atmosphere‐sea ice‐ocean system have significant potential to alter biogeochemical cycling and ecosystem dynamics. In particular, the impact of increased open water duration on lower trophic level productivity and biological CO2 sequestration is poorly understood. Using high‐resolution observations of surface seawater dissolved O2/Ar and pCO2 collected in the Pacific Arctic in October 2011 and 2012, we evaluate spatial variability in biological metabolic status (autotrophy vs heterotrophy) as constrained by O2/Ar saturation (∆O2/Ar) as well as the relationship between net biological production and the sea‐air gradient of pCO2 (∆pCO2). We find a robust relationship between ∆pCO2 and ∆O2/Ar (correlation coefficient of −0.74 and −0.61 for 2011 and 2012, respectively), which suggests that biological production in the late open water season is an important determinant of the air‐sea CO2 gradient at a timeframe of maximal ocean uptake for CO2 in this region. Patchiness in biological production as indicated by ∆O2/Ar suggests spatially variable nutrient supply mechanisms supporting late season growth amidst a generally strongly stratified and nutrient‐limited condition.

Description: We thank the Captain, crew, and marine technicians of the USCGC Healy for their shipboard support. We also thank anonymous reviewers for providing useful feedback that improved this manuscript. This work was supported by NSF awards 1232856 and 1504394 to L.W.J. T.T. was supported by a grant NA150AR4320064 from Climate Program Office/NOAA and R.P. by NSF PLR‐1504333 and OPP‐1702371. All O2 and O2/Ar data and metadata are available at Arcticdata.io, doi:10.18739/A21G22, and pCO2 data are available at www.ldeo.columbia.edu/CO2 as well as from the NOAA National Centers for Environmental Information Ocean Carbon Data System at https://www.nodc.noaa.gov/ocads/.

Description: 2019-07-10

Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Lemkau, K. L., Reddy, C. M., Carmichael, C. A., Aeppli, C., Swarthout, R. F., & White, H. K. Hurricane Isaac brings more than oil ashore: Characteristics of beach deposits following the Deepwater Horizon spill. Plos One, 14(3), (2019):e0213464, doi:10.1371/journal.pone.0213464.

Description: Prior to Hurricane Isaac making landfall along the Gulf of Mexico coast in August 2012, local and state officials were concerned that the hurricane would mobilize submerged oiled-materials from the Deepwater Horizon (DWH) spill. In this study, we investigated materials washed ashore following the hurricane to determine if it affected the chemical composition or density of oil-containing sand patties regularly found on Gulf Coast beaches. While small changes in sand patty density were observed in samples collected before and after the hurricane, these variations appear to have been driven by differences in sampling location and not linked to the passing of Hurricane Isaac. Visual and chemical analysis of sand patties confirmed that the contents was consistent with oil from the Macondo well. Petroleum hydrocarbon signatures of samples collected before and after the hurricane showed no notable changes. In the days following Hurricane Isaac, dark-colored mats were also found on the beach in Fort Morgan, AL, and community reports speculated that these mats contained oil from the DWH spill. Chemical analysis of these mat samples identified n-alkanes but no other petroleum hydrocarbons. Bulk and δ13C organic carbon analyses indicated mat samples were comprised of marshland peat and not related to the DWH spill. This research indicates that Hurricane Isaac did not result in a notable change the composition of oil delivered to beaches at the investigated field sites. This study underscores the need for improved communications with interested stakeholders regarding how to differentiate oiled from non-oiled materials. This is especially important given the high cost of removing oiled debris and the increasing likelihood of false positives as oiled-materials washing ashore from a spill become less abundant over time.

Description: The authors wish to acknowledge support for this project from the Gulf of Mexico Research Initiative (RFP-V), the Deep-C Consortium (SA 16-30), NSF (OCE-1333148) awarded to CMR, and a Gulf Research Program Early-Career Research Fellowship to HKW. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.

Description: The 2017 North Atlantic right whale (NARW) unusual mortality event and an increase in humpback whale entanglements off the U.S. West Coast have driven significant interest in ropeless trap/pot fishing. Removing the vertical buoy lines used to mark traps on the sea floor and haul them up would dramatically reduce or eliminate entanglements, the leading cause of NARW mortality, while potentially allowing fishermen to harvest in areas that would otherwise need to be closed to protect whales. At the first annual Ropeless Consortium meeting, researchers, fishing industry representatives, manufacturers, conservationists, and regulators discussed existing and developing technological replacements for the marking and retrieval functions of buoy lines. Fishermen and NGO partners shared their experience demonstrating ropeless systems and provided feedback to improve the designs. U.S. and Canadian federal regulators discussed prospects to use ropeless fishing gear in areas closed to fishing with vertical lines, as well as other options to reduce entanglements, and a Massachusetts official shared additional regulatory considerations involved in ropeless fishing in state waters. Sustainable seafood experts discussed consumer market advantages and endangered, threatened, and protected species impacts in sustainability standards and certifications. Moving forward, there is an immediate need to (1) work with industry partners to iteratively test and improve ropeless retrieval and marking systems to adapt them to the specific conditions of the relevant trap/pot fisheries, (2) create data sharing and communications protocols for ropeless gear location marking, and (3) develop regulatory procedures and enforcement capacity to allow legal ropeless gear use.

Description: This research did not receive any specific grant from funding agencies in the public, commercial, or not-for-profit sectors.

Description: 2020-06-22

Description: Author Posting. © American Geophysical Union, 2010. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Global Biogeochemical Cycles 33(2), (2019): 181-199. doi:10.1029/2018GB005983.

Description: One pathway of the biological pump that remains largely unquantified in many export models is the active transport of carbon from the surface ocean to the mesopelagic by zooplankton diel vertical migration (DVM). Here, we develop a simple representation of zooplankton DVM and implement it in a global export model as a thought experiment to illustrate the effects of DVM on carbon export and mesopelagic biogeochemistry. The model is driven by diagnostic satellite measurements of net primary production, algal biomass, and phytoplankton size structure. Due to constraints on available satellite data, the results are restricted to the latitude range from 60°N to 60°S. The modeled global export flux from the base of the euphotic zone was 6.5 PgC/year, which represents a 14% increase over the export flux in model runs without DVM. The mean (± standard deviation, SD) proportional contribution of the DVM‐mediated export flux to total carbon export, averaged over the global domain and the climatological seasonal cycle, was 0.16 ± 0.04 and the proportional contribution of DVM activity to total respiration within the twilight zone was 0.16 ± 0.06. Adding DVM activity to the model also resulted in a deep local maximum in the oxygen utilization profile. The model results were most sensitive to the assumptions for the fraction of individuals participating in DVM, the fraction of fecal pellets produced in the euphotic zone, and the fraction of grazed carbon that is metabolized.

Description: Support for this work came from the National Science Foundation (OCE‐1434000 and OCE‐1657803) and the National Aeronautics and Space Administration (NASA) as part of the EXport Processes in the global Ocean from RemoTe Sensing (EXPORTS) field campaign (grant 80NSSC17K0692) and the North Atlantic Aerosol and Marine Ecosystems Study (NAAMES, grants NNX15AE72G and 80NSSC18K0018). The satellite data used as drivers for the model are available as supporting information. The World Ocean Atlas data (World Ocean Atlas 2009, Annual Climatology, 1 degree, Temperature, Salinity, Oxygen) containing temperature and oxygen measurements can be downloaded from the ERDAPP data server (https://coastwatch.pfeg.noaa.gov/erddap/index.html).

Description: 2019-07-19

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Solid Earth 124(4), (2019): 3320-3334, doi:10.1029/2018JB017236.

Description: We present a method to calculate landslide hazard curves along offshore margins based on size distributions of submarine landslides. The method utilizes 10 different continental margins that were mapped by high‐resolution multibeam sonar with landslide scar areas measured by a consistent Geographic Information System procedure. Statistical tests of several different probability distribution models indicate that the lognormal model is most appropriate for these siliciclastic environments, consistent with an earlier study of the U.S. Atlantic margin (Chaytor et al., 2009, https://doi.org/10.1016/j.margeo.2008.08.007). Parameter estimation is performed using the maximum likelihood technique, and confidence intervals are determined using likelihood profiles. Pairwise comparison of size distributions for the 10 margins indicates that the U.S. Atlantic and Queen Charlotte margins are different than most other margins. These margins represent end‐members, with the U.S. Atlantic margin having the highest mean scar area and the Queen Charlotte margin the lowest. We demonstrate that empirical, offshore landslide hazard curves can be developed from the landslide size distributions, if the duration of mapped landslide activity is known. This study indicates that the shape parameter of the size distribution is similar among all 10 margins, and thus, the shape of the hazard curves is also similar. Significant differences in hazard curves among the margins are therefore related to differences in mean sizes and, potentially, differences in the duration of landslide activity.

Description: The authors gratefully acknowledge the constructive comments of this manuscript by Joshu Mountjoy, Tom Parsons, and anonymous reviewer. We also thank Yehuda Ben Zion for managing this manuscript and the scientists who provided the bathymetry data. Margin and landslide polygon shape files and information on bathymetry data sources are available at GSA Repository item number 2016187.

Description: 2019-10-01

Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Thomas, F., Morris, J. T., Wigand, C., & Sievert, S. M. Short-term effect of simulated salt marsh restoration by sand-amendment on sediment bacterial communities. Plos One, 14(4), (2019):e0215767, doi:10.1371/journal.pone.0215767.

Description: Coastal climate adaptation strategies are needed to build salt marsh resiliency and maintain critical ecosystem services in response to impacts caused by climate change. Although resident microbial communities perform crucial biogeochemical cycles for salt marsh functioning, their response to restoration practices is still understudied. One promising restoration strategy is the placement of sand or sediment onto the marsh platform to increase marsh resiliency. A previous study examined the above- and below-ground structure, soil carbon dioxide emissions, and pore water constituents in Spartina alterniflora-vegetated natural marsh sediments and sand-amended sediments at varying inundation regimes. Here, we analyzed samples from the same experiment to test the effect of sand-amendments on the microbial communities after 5 months. Along with the previously observed changes in biogeochemistry, sand amendments drastically modified the bacterial communities, decreasing richness and diversity. The dominant sulfur-cycling bacterial community found in natural sediments was replaced by one dominated by iron oxidizers and aerobic heterotrophs, the abundance of which correlated with higher CO2-flux. In particular, the relative abundance of iron-oxidizing Zetaproteobacteria increased in the sand-amended sediments, possibly contributing to acidification by the formation of iron oxyhydroxides. Our data suggest that the bacterial community structure can equilibrate if the inundation regime is maintained within the optimal range for S. alterniflora. While long-term effects of changes in bacterial community on the growth of S. alterniflora are not clear, our results suggest that analyzing the microbial community composition could be a useful tool to monitor climate adaptation and restoration efforts.

Description: This work was supported by NSF grants DEB-1050557 (SMS) and OCE-1637630 (JM), and WHOI Investment in Science Funds (SMS). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters, 46(9), (2019):4664-4673, doi:10.1029/2019GL082201.

Description: Accretion of the lower crust at mid‐ocean ridges is a debated topic, with modern seismic observations pointing to a complex magmatic system that includes an axial multisill system of middle‐ and lower‐crustal melt lenses and near‐ and off‐axis melt bodies. Here we revisit the hot spot‐influenced section of the western Galápagos Spreading Centre and reprocess multichannel seismic reflection data using a wide‐angle seismic tomography model. Our new images show that the magma reservoir in the lower crust at this ridge section is intruded with partially molten melt lenses. The images also show evidence for off‐axis melt lenses, magmatic‐hydrothermal interactions and Moho reflections in this region. We conclude that the similarities between the axial crustal structure of this hot spot‐influenced mid‐ocean ridge and the multisill magmatic structure imaged at the East Pacific Rise indicate that these features are common along the global mid‐ocean ridge system where seafloor spreading is dominated by magmatic accretion.

Description: Seismic data used in this study are available at https://doi.org/10.1594/IEDA/314480 (Detrick & Sinton, 2014). Data processing was conducted with Emerson‐Paradigm Software package Echos licensed to Woods Hole Oceanographic Institution under Paradigm Academic Software Program. B. B. is funded by the Graduate School of the National Oceanography Centre Southampton UK. We thank two anonymous reviewers for their constructive and insightful comments that helped us in improving the manuscript and A. S. Soule for fruitful discussions.

Description: 2019-10-29

Description: Author Posting. © The Author(s), 2019. This is the author's version of the work. It is posted here by permission of National Academy of Sciences for personal use, not for redistribution. The definitive version was published in Proceedings of the National Academy of Sciences of the United States of America 116(25), (2019):12343-12352, doi:10.1073/pnas.1901080116.

Description: Genes encoding cytochrome P450 (CYP; P450) enzymes occur widely in the Archaea, Bacteria, and Eukarya, where they play important roles in metabolism of endogenous regulatory molecules and exogenous chemicals. We now report that genes for multiple and unique P450s occur commonly in giant viruses in the Mimiviridae, Pandoraviridae, and other families in the proposed order Megavirales. P450 genes were also identified in a herpesvirus (Ranid herpesvirus 3) and a phage (Mycobacterium phage Adler). The Adler phage P450 was classified as CYP102L1, and the crystal structure of the open form was solved at 2.5 Å. Genes encoding known redox partners for P450s (cytochrome P450 reductase, ferredoxin and ferredoxin reductase, and flavodoxin and flavodoxin reductase) were not found in any viral genome so far described, implying that host redox partners may drive viral P450 activities. Giant virus P450 proteins share no more than 25% identity with the P450 gene products we identified in Acanthamoeba castellanii, an amoeba host for many giant viruses. Thus, the origin of the unique P450 genes in giant viruses remains unknown. If giant virus P450 genes were acquired from a host, we suggest it could have been from an as yet unknown and possibly ancient host. These studies expand the horizon in the evolution and diversity of the enormously important P450 superfamily. Determining the origin and function of P450s in giant viruses may help to discern the origin of the giant viruses themselves.

Description: We thank Dr. David Nes (Texas Tech University) for providing sterols and Dr. Matthieu Legendre and Dr. Chantal Abergel (CNRS, Marseille) for access to the P. celtis sequences. Drs. Irina Arkhipova, Mark Hahn, Judith Luborsky, and Ann Bucklin commented on the manuscript. The research was supported by a USA-UK Fulbright Scholarship and a Royal Society grant (to D.C.L.), the Boston University Superfund Research Program [NIH Grant 5P42ES007381 (to J.J.S. and J.V.G.) and NIH Grant 5U41HG003345 (to J.V.G.)], the European Regional Development Fund and Welsh Government Project BEACON (S.L.K.), the Woods Hole Center for Oceans and Human Health [NIH Grant P01ES021923 and National Science Foundation Grant OCE-1314642 (to J.J.S.)], and NIH Grant R01GM53753 (to T.L.P.).

Description: 2019-12-05

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 46(10), (2019): 5369-5377, doi: 10.1029/2019GL082078.

Description: Seasonal evolution of the barrier layer (BL) and temperature inversion in the northern Bay of Bengal and their role on the mixed layer temperature (MLT) is examined using observations from a single Argo during December 2013 to July 2017. During fall, low salinity at surface generates BL in this region. It thickens to almost 80 m in winter enhanced by deepening of isothermal layer depth due to remote forcing. During winter, surface cooling lowers near‐surface temperature, and thus, the subsurface BL experiences a significant temperature inversion (~2.5 °C). This temperature inversion diffuses to distribute heat within ML and surface heating begins deep penetration of shortwave radiation through ML during spring. Hence, the ML becomes thermally well stratified, resulting in the warmest MLT. The Monin‐Obukhov length attains its highest value during summer indicating wind dominance in the ML. During spring and fall, upper ocean gains heat allowing buoyancy to dominate over wind mixing.

Description: A. S. and S. S. thank financial support from Space Application Centre (SAC), Indian Space Research Organization (ISRO), Government of India (Grant: SAC/EPSA/4.19/2016). This study was also supported by the first phase of Ministry of Earth Sciences (MoES), Government of India grant to establish a Bay of Bengal Coastal Observatory (BOBCO) at IITBBS (Grant: RP088). Authors acknowledged NCPOR Contribution number J ‐ 03/2019‐20 for this work. The authors are grateful to the reviewers and the Editor for constructive suggestions. The figures are generated using Matlab. The data source and availability are given in the Text S1.

Description: 2019-10-24

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(7), (2019): 4696-4709, doi: 10.1029/2019JC015022.

Description: The Beaufort Gyre is a key feature of the Arctic Ocean, acting as a reservoir for freshwater in the region. Depending on whether the prevailing atmospheric circulation in the Arctic is anticyclonic or cyclonic, either a net accumulation or release of freshwater occurs. The sources of freshwater to the Arctic Ocean are well established and include contributions from the North American and Eurasian Rivers, the Bering Strait Pacific water inflow, sea ice meltwater, and precipitation, but their contribution to the Beaufort Gyre freshwater accumulation varies with changes in the atmospheric circulation. Here we use a Lagrangian backward tracking technique in conjunction with the 1/12‐degree resolution Nucleus for European Modelling of the Ocean model to investigate how sources of freshwater to the Beaufort Gyre have changed in recent decades, focusing on increase in the Pacific water content in the gyre between the late 1980s and early 2000s. Using empirical orthogonal functions we analyze the change in the Arctic oceanic circulation that occurred between the 1980s and 2000s. We highlight a “waiting room” advective pathway that was present in the 1980s and provide evidence that this pathway was caused by a shift in the center of Ekman transport convergence in the Arctic. We discuss the role of these changes as a contributing factor to changes in the stratification, and hence potentially the biology, of the Beaufort Gyre region.

Description: The underpinning high‐resolution NEMO simulation was performed using the ARCHER UK National Supercomputing Service (http://www.archer.ac.uk). ARIANE simulations were performed using the JASMIN data analysis environment (http://www.jasmin.ac.uk). Lagrangian analysis was carried out using computational tool ARIANE developed by B. Blanke and N. Grima. Arctic dynamic topography/geostrophic currents data were provided by the Centre for Polar Observation and Modelling, University College London (www.cpom.ucl.ac.uk/dynamic_topography; Armitage et al., 2016). The funding for A. Proshutinsky was provided by the NSF under grants supporting the Beaufort Gyre Observing System since 2003 (1845877, 1719280, 1604085) and by the Woods Hole Oceanographic Institution. Y. Aksenov was supported from the NERC Program “The North Atlantic Climate System Integrated Study (ACSIS), NE/N018044/1 and from the project “Advective pathways of nutrients and key ecological substances in the Arctic (APEAR)” NE/R012865/1, as a part of the joint UK/Germany “Changing Arctic Ocean” Programme. A. Yool and E. Popova were supported by NERC grants CLASS NE/R015953/1, and National Capability in Ocean Modelling. We acknowledge the FAMOS (http://web.whoi.edu/famos/) program for providing a framework for many fruitful discussions which thoroughly enhanced this work. Finally, we thank the two anonymous reviewers who greatly improved this work with their insightful input.

Description: 2019-12-26

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(7), (2019): 4433-4448, doi: 10.1029/2018JC014508.

Description: Yu et al. (2017, https://doi.org/10.1002/2017GL075772) reported that the annual mean sea surface salinity maximum (SSS‐max) in the North Atlantic expanded northward by 0.35 ± 0.11° per decade over the 34‐year data record (1979–2012). The expansion shifted and expanded the ventilation zone northward and increased the production of the Subtropical Underwater (STUW). As a result, the STUW became deeper, thicker, and saltier. In this study, the seasonal characteristics of the poleward expansion of the North Atlantic SSS‐max and their effects on the STUW are examined. The results show that the SSS‐max expansion occurred primarily during boreal spring (April, May, and June) and expanded northward by 0.43 ± 0.21° per decade over the 34‐year period. The annual volume of the STUW increased by 0.21 ± 0.09 1014 m3 per decade over the same period, and the spring (April, May, and June) volume increased by 0.31 ± 0.02 1014 m3 per decade (a relative increase of 48 ± 1%). The characteristics of the decadal changes in STUW were attributable to the increased subduction rate associated with the northward expansion of the SSS‐max. The annual subduction rate increased by 0.29 ± 0.07 Sv per decade over the 34 years, and the greatest increase of 1.73 ± 0.61 Sv per decade occurred in April. The change in subduction associated with the expansion of the SSS‐max appeared to be consistent with the Atlantic Multidecadal Oscillation.

Description: Most of the work was conducted at the Woods Hole Oceanographic Institution, while H. Liu was a guest student sponsored by the China Scholarship Council (201506330001). H. Liu thanks Drs. Ruixin Huang and Xiangze Jin for discussions on the computation of the STUW formation and subduction rates. The Ishii subsurface salinity and temperature analysis data sets were downloaded from https://rda.ucar.edu/datasets/ds285.3/. The EN4 data set is available at https://www.metoffice.gov.uk/hadobs/en4/download‐en4‐2‐1.html. The LEGOS SSS is accessible from http://www.legos.obs‐mip.fr/observations/sss/datadelivery/products.The OAFlux vector wind analysis is available at http://oaflux.whoi.edu. The NAO index was downloaded from https://www.ncdc.noaa.gov/teleconnections/nao/. The AMO index is available at https://www.esrl.noaa.gov/psd/data/timeseries/AMO/. X. Lin is supported by China's National Key Research and Development Projects (2016YFA0601803) in addition to the National Natural Science Foundation of China (41521091 and U1606402) and the Qingdao National Laboratory for Marine Science and Technology (2017ASKJ01).

Description: 2019-12-11

Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Umling, N. E., Oppo, D. W., Chen, P., Yu, J., Liu, Z., Yan, M., Gebbie, G., Lund, D. C., Pietro, K. R., Jin, Z. D., Huang, K., Costa, K. B., & Toledo, F. A. L. Atlantic circulation and ice sheet influences on upper South Atlantic temperatures during the last deglaciation. Paleoceanography and Paleoclimatology, 34(6), (2019): 990-1005, doi:10.1029/2019PA003558.

Description: Atlantic Meridional Overturning Circulation (AMOC) disruption during the last deglaciation is hypothesized to have caused large subsurface ocean temperature anomalies, but records from key regions are not available to test this hypothesis, and other possible drivers of warming have not been fully considered. Here, we present the first reliable evidence for subsurface warming in the South Atlantic during Heinrich Stadial 1, confirming the link between large‐scale heat redistribution and AMOC. Warming extends across the Bølling‐Allerød despite predicted cooling at this time, thus spanning intervals of both weak and strong AMOC indicating another forcing mechanism that may have been previously overlooked. Transient model simulations and quasi‐conservative water mass tracers suggest that reduced northward upper ocean heat transport was responsible for the early deglacial (Heinrich Stadial 1) accumulation of heat at our shallower (~1,100 m) site. In contrast, the results suggest that warming at our deeper site (~1,900 m) site was dominated by southward advection of North Atlantic middepth heat anomalies. During the Bølling‐Allerød, the demise of ice sheets resulted in oceanographic changes in the North Atlantic that reduced convective heat loss to the atmosphere, causing subsurface warming that overwhelmed the cooling expected from an AMOC reinvigoration. The data and simulations suggest that rising atmospheric CO2 did not contribute significantly to deglacial subsurface warming at our sites.

Description: We thank H. Abrams, G. Swarr, and J. Watson for technical assistance. This work was funded by the U.S. National Science Foundation grant OCE15‐558341, the Investment in Science Fund at the Woods Hole Oceanographic Institution, and an Australian Research Council Future Fellowship (FT140100993). The data are included in the supporting information and are available online (https://www.ncdc.noaa.gov/paleo/study/26530).

Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Donatelli, C., Ganju, N. K., Kalra, T. S., Fagherazzi, S., & Leonardi, N. (2019). Dataset of numerical modelling results of wave thrust on salt marsh boundaries with different seagrass coverages in a shallow back-barrier estuary. Data in Brief, 25, 104197, doi:10.1016/j.dib.2019.104197.

Description: This article contains data on the effects of seagrass decline on wave energy along the shoreline of Barnegat Bay (USA) previously evaluated in Donatelli et al., 2019. This study was carried out applying the Coupled-Ocean-Atmosphere-Wave-Sediment Transport (COAWST) numerical modelling framework to six historical maps of seagrass distribution. A new routine recently implemented in COAWST was used, which explicitly computes the wave thrust acting on salt marsh boundaries. The numerical modelling results are reported in terms of wind-wave heights for different seagrass coverages, wind speeds and directions. From a comparison with a numerical experiment without submerged aquatic vegetation, we show how the computed wave thrust on marsh boundaries can be reduced by seagrass beds.

Description: This study was supported by the Department of the Interior Hurricane Sandy Recovery program (ID G16AC00455, sub-award to University of Liverpool). S.F. was partly supported by NSF awards 1637630 (PIE LTER) and 1832221 (VCR LTER). We further acknowledge partial support from the Environmental Change Research group at University of Liverpool, and University of Liverpool library for publication fees.

Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Hult, M., Charette, M., Lutter, G., Marissens, G., Henderson, P., Sobiech-Matura, K., & Simgen, H. Underground gamma-ray measurements of radium isotopes from hydrothermal plumes in the deep Pacific Ocean. Applied Radiation and Isotopes, 153, (2019): 108831, doi:10.1016/j.apradiso.2019.108831.

Description: The radium isotopes 226Ra and 228Ra can provide important data on the dynamics of deep-sea hydrothermal plumes that travel the oceans for decades and have great impact on the ocean chemistry. This study focuses on parameters important for obtaining low detection limits for 228Ra using gamma-ray spectrometry. It is present at mBq-levels in samples collected during the US GEOTRACES 2013 cruise to the Southeast Pacific Ocean.

Description: The work of the HADES-staff of Euridice at SCK•CEN is gratefully acknowledged. We are most grateful to Dr. Faidra Tzika for her work in the precursor to this project. Many thanks to Heiko Stroh for quality control and measurements in HADES. This research was supported in part by grants from the U.S. National Science Foundation, Ocean Sciences division (OCE-1232669 and OCE-1736277).

Description: Author Posting. © National Academy of Sciences, 2019. This article is posted here by permission of National Academy of Sciences for personal use, not for redistribution. The definitive version was published in Proceedings of the National Academy of Sciences 116 (35), (2019): 17187-17192, doi:10.1073/pnas.1903067116.

Description: Mesoscale eddies are critical components of the ocean’s “internal weather” system. Mixing and stirring by eddies exerts significant control on biogeochemical fluxes in the open ocean, and eddies may trap distinctive plankton communities that remain coherent for months and can be transported hundreds to thousands of kilometers. Debate regarding how and why predators use fronts and eddies, for example as a migratory cue, enhanced forage opportunities, or preferred thermal habitat, has been ongoing since the 1950s. The influence of eddies on the behavior of large pelagic fishes, however, remains largely unexplored. Here, we reconstruct movements of a pelagic predator, the blue shark (Prionace glauca), in the Gulf Stream region using electronic tags, earth-observing satellites, and data-assimilating ocean forecasting models. Based on 〉2,000 tracking days and nearly 500,000 high-resolution time series measurements collected by 15 instrumented individuals, we show that blue sharks seek out the interiors of anticyclonic eddies where they dive deep while foraging. Our observations counter the existing paradigm that anticyclonic eddies are unproductive ocean “deserts” and suggest anomalously warm temperatures in these features connect surface-oriented predators to the most abundant fish community on the planet in the mesopelagic. These results also shed light on the ecosystem services provided by mesopelagic prey. Careful consideration will be needed before biomass extraction from the ocean twilight zone to avoid interrupting a key link between planktonic production and top predators. Moreover, robust associations between targeted fish species and oceanographic features increase the prospects for effective dynamic ocean management.

Description: We thank D. McGillicuddy, G. Lawson, and G. Flierl for helpful discussions while developing this work and 2 anonymous reviewers whose feedback significantly improved the manuscript. We also thank C. Fischer and the OCEARCH team for their support of this research. This work was funded by awards to C.D.B. from the Martin Family Society of Fellows for Sustainability Fellowship at the Massachusetts Institute of Technology; the Grassle Fellowship and Ocean Venture Fund at the Woods Hole Oceanographic Institution; and the National Aeronatics and Space Administration (NASA) Earth and Space Science Fellowship. C.D.B. and P.G. acknowledge support from the NASA New Investigator Program Award 80NSSC18K0757, and P.G. acknowledges support from NSF Award OCE-1558809. This research is partially supported by funding to S.R.T. as part of the Audacious Project, a collaborative endeavor, housed at TED. We thank donors to the Woods Hole Oceanographic Institution (WHOI) ProjectWHOI crowdfunding campaign: The Secret Lives of Sharks. Computational support was provided by the Amazon Web Services Cloud Credits for Research program. Funding for the development of HYCOM has been provided by the National Ocean Partnership Program and the Office of Naval Research.

Description: 2020-02-06

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Biogeosciences 124(5), (2019): 1265-1277, doi:10.1029/2018JG004920.

Description: Tidal wetland fluxes of particulate organic matter and carbon (POM, POC) are important terms in global budgets but remain poorly constrained. Given the link between sediment fluxes and wetland stability, POM and POC fluxes should also be related to stability. We measured POM and POC fluxes in eight microtidal salt marsh channels, with net POM fluxes ranging between −121 ± 33 (export) and 102 ± 28 (import) g OM·m−2·year−1 and net POC fluxes ranging between −52 ± 14 and 43 ± 12 g C·m−2·year−1. A regression employing two measures of stability, the unvegetated‐vegetated marsh ratio (UVVR) and elevation, explained 〉95% of the variation in net fluxes. The regression indicates that marshes with lower elevation and UVVR import POM and POC while higher elevation marshes with high UVVR export POM and POC. We applied these relationships to marsh units within Barnegat Bay, New Jersey, USA, finding a net POM import of 2,355 ± 1,570 Mg OM/year (15 ± 10 g OM·m−2·year−1) and a net POC import of 1,263 ± 632 Mg C/year (8 ± 4 g C·m−2·year−1). The magnitude of this import was similar to an estimate of POM and POC export due to edge erosion (−2,535 Mg OM/year and − 1,291 Mg C/year), suggesting that this system may be neutral from a POM and POC perspective. In terms of a net budget, a disintegrating wetland should release organic material, while a stable wetland should trap material. This study quantifies that concept and demonstrates a linkage between POM/POC flux and geomorphic stability.

Description: Use of brand names is for identification purposes only and does not constitute endorsement by the U.S. Government. This study was supported by the USGS Coastal and Marine Geology Program, the Department of the Interior Hurricane Sandy Recovery program (GS2‐2D), and the USGS Mendenhall Post‐doctoral Research Program. Viktoria Unger and Paula Zelanko are acknowledged for field and lab assistance. Core collection was funded under NJ SeaGrant/NOAA Grant 6210‐0011. Gil Pontius provided helpful feedback on statistical measures. Kevin Kroeger and two anonymous reviewers provided constructive reviews of the manuscript. All time series and water sample data are available at the U.S. Geological Survey's Oceanographic Time‐Series Data Collection (at https://stellwagen.er.usgs.gov/).

Description: 2019-10-23

Description: Author Posting. © National Academy of Sciences, 2019. This article is posted here by permission of National Academy of Sciences for personal use, not for redistribution. The definitive version was published in Proceedings of the National Academy of Sciences 116 (35), (2019): 17207-17212, doi:10.1073/pnas.1900325116.

Description: It has been hypothesized that the overall size of—or efficiency of carbon export from—the biosphere decreased at the end of the Great Oxidation Event (GOE) (ca. 2,400 to 2,050 Ma). However, the timing, tempo, and trigger for this decrease remain poorly constrained. Here we test this hypothesis by studying the isotope geochemistry of sulfate minerals from the Belcher Group, in subarctic Canada. Using insights from sulfur and barium isotope measurements, combined with radiometric ages from bracketing strata, we infer that the sulfate minerals studied here record ambient sulfate in the immediate aftermath of the GOE (ca. 2,018 Ma). These sulfate minerals captured negative triple-oxygen isotope anomalies as low as ∼ −0.8‰. Such negative values occurring shortly after the GOE require a rapid reduction in primary productivity of 〉80%, although even larger reductions are plausible. Given that these data imply a collapse in primary productivity rather than export efficiency, the trigger for this shift in the Earth system must reflect a change in the availability of nutrients, such as phosphorus. Cumulatively, these data highlight that Earth’s GOE is a tale of feast and famine: A geologically unprecedented reduction in the size of the biosphere occurred across the end-GOE transition.

Description: Olivia M. J. Dagnaud assisted during fieldwork. S. V. Lalonde and E. A. Sperling provided helpful comments on an early version of the manuscript. We thank N. J. Planavsky and an anonymous reviewer for their constructive feedback. M.S.W.H. was supported by an NSERC PGS-D and student research grants from National Geographic, the APS Lewis and Clark Fund, Northern Science Training Program, McGill University Graduate Research Enhancement and Travel Awards, Geological Society of America, Mineralogical Association of Canada, and Stanford University. P.W.C. acknowledges support from the University of Colorado Boulder, the Agouron Institute Geobiology postdoctoral Fellowship program, a Natural Sciences and Engineering Council of Canada Postgraduate Scholarship–Doctoral Program scholarship, and the NSTP. Y.P. was supported by the Strategic Priority Research Program of CAS (XDB26000000). T.J.H. thanks Maureen E. Auro for laboratory assistance and the NSF for supporting isotope research in the NIRVANA Labs.

Description: 2020-02-12

Description: © The Author(s), 2019. This is the author's version of the work and is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Gómez Fernando, Felipe Artigas Luis, J. Gast Rebecca. Molecular phylogeny of the parasitic dinoflagellate Syltodinium listii (Gymnodiniales, Dinophyceae) and generic transfer of Syltodinium undulans comb. nov. (=Gyrodinium undulans). European Journal of Protistology, (2019): 125636, doi:10.1016/j.ejop.2019.125636.

Description: The parasitic dinoflagellate Syltodinium listii was investigated from the open waters of the English Channel and the NW Mediterranean Sea. Syltodinium listii has been unreported since its original description in the North Sea. Cells of S. listii were able to immediately infect copepod eggs of different species, and even nauplii, and after each infection to form up to 32 cells embedded in a mucous envelope. Infection of the same host by more than one dinoflagellate was frequent; although overall, the progeny were reduced in number. Molecular phylogeny based on the small subunit ribosomal RNA (SSU rRNA) gene revealed that S. listii clusters with a group of environmental sequences from the cold North Atlantic region as a sister group of Gymnodinium aureolum. The large subunit ribosomal RNA (LSU rRNA) gene sequences of S. listii from the English Channel and cf. Gyrodinium undulans from the Mediterranean Sea were identical. Thus, we propose Syltodinium undulans comb. nov. for Gyrodinium undulans. The first internal transcribed spacer (ITS) and complete SSU rRNA gene sequences of Dissodinium pseudolunula are provided. The parasitic species of Chytriodinium, Dissodinium and Syltodinium cluster together within the family Chytriodiniaceae, including the free-living species Gymnodinium aureolum, G. corollarium and G. plasticum.

Description: F.G. was supported by the Ministerio Español de Ciencia y Tecnología [contract JCI-2010-08492], and by the convention #2101893310 between CNRS-INSU and the French Ministry for the Ecological and Solidary Transition (MTES) for the implementation of the Monitoring Program of the European Marine Strategy Framework Directive (MSFD), which also supported the ECOPEL-Manche cruises.

Description: 2020-09-17

Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Radice, V. Z., Brett, M. T., Fry, B., Fox, M. D., Hoegh-Guldberg, O., & Dove, S. G. Evaluating coral trophic strategies using fatty acid composition and indices. Plos One, 14(9), (2019): e0222327, doi:10.1371/journal.pone.0222327.

Description: The ecological success of shallow water reef-building corals has been linked to the symbiosis between the coral host and its dinoflagellate symbionts (herein ‘symbionts’). As mixotrophs, symbiotic corals depend on nutrients 1) transferred from their photosynthetic symbionts (autotrophy) and 2) acquired by host feeding on particulate organic resources (heterotrophy). However, coral species differ in the extent to which they depend on heterotrophy for nutrition and these differences are typically poorly defined. Here, a multi-tracer fatty acid approach was used to evaluate the trophic strategies of three species of common reef-building coral (Galaxea fascicularis, Pachyseris speciosa, and Pocillopora verrucosa) whose trophic strategies had previously been identified using carbon stable isotopes. The composition and various indices of fatty acids were compared to examine the relative contribution of symbiont autotrophy and host heterotrophy in coral energy acquisition. A linear discriminant analysis (LDA) was used to estimate the contribution of polyunsaturated fatty acids (PUFA) derived from various potential sources to the coral hosts. The total fatty acid composition and fatty acid indices revealed differences between the more heterotrophic (P. verrucosa) and more autotrophic (P. speciosa) coral hosts, with the coral host G. fascicularis showing overlap with the other two species and greater variability overall. For the more heterotrophic P. verrucosa, the fatty acid indices and LDA results both indicated a greater proportion of copepod-derived fatty acids compared to the other coral species. Overall, the LDA estimated that PUFA derived from particulate resources (e.g., copepods and diatoms) comprised a greater proportion of coral host PUFA in contrast to the lower proportion of symbiont-derived PUFA. These estimates provide insight into the importance of heterotrophy in coral nutrition, especially in productive reef systems. The study supports carbon stable isotope results and demonstrates the utility of fatty acid analyses for exploring the trophic strategies of reef-building corals.

Description: This study was made possible by funding from the XL Catlin Seaview Survey (OHG and VZR; http://catlinseaviewsurvey.com/), Australian Research Council (ARC) Centre of Excellence for Coral Reef Studies (CE140100020; SD and OHG; https://www.coralcoe.org.au/), an ARC Laureate Fellowship (FL120100066; OHG; https://www.arc.gov.au), the University of Queensland Research Training Scholarship (VZR; https://www.uq.edu.au/), and the University of Washington Dale A. Carlson Endowed Faculty Support Fund (MTB and VZR; https://www.washington.edu/). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.

Description: © The Author(s), 2019. This is the author's version of the work and is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Clark, S., Hubbard, K. A., Anderson, D. M., McGillicuddy, D. J.,Jr, Ralston, D. K., & Townsend, D. W. Pseudo-nitzschia bloom dynamics in the Gulf of Maine: 2012-2016. Harmful Algae, 88, (2019): 101656, doi:10.1016/j.hal.2019.101656.

Description: The toxic diatom genus Pseudo-nitzschia is a growing presence in the Gulf of Maine (GOM), where regionally unprecedented levels of domoic acid (DA) in 2016 led to the first Amnesic Shellfish Poisoning closures in the region. However, factors driving GOM Pseudo-nitzschia dynamics, DA concentrations, and the 2016 event are unclear. Water samples were collected at the surface and at depth in offshore transects in summer 2012, 2014, and 2015, and fall 2016, and a weekly time series of surface water samples was collected in 2013. Temperature and salinity data were obtained from NERACOOS buoys and measurements during sample collection. Samples were processed for particulate DA (pDA), dissolved nutrients (nitrate, ammonium, silicic acid, and phosphate), and cellular abundance. Species composition was estimated via Automated Ribosomal Intergenic Spacer Analysis (ARISA), a semi-quantitative DNA finger-printing tool. Pseudo-nitzschia biogeography was consistent in the years 2012, 2014, and 2015, with greater Pseudo-nitzschia cell abundance and P. plurisecta dominance in low-salinity inshore samples, and lower Pseudo-nitzschia cell abundance and P. delicatissima and P. seriata dominance in high-salinity offshore samples. During the 2016 event, pDA concentrations were an order of magnitude higher than in previous years, and inshore-offshore contrasts in biogeography were weak, with P. australis present in every sample. Patterns in temporal and spatial variability confirm that pDA increases with the abundance and the cellular DA of Pseudo-nitzschia species, but was not correlated with any one environmental factor. The greater pDA in 2016 was caused by P. australis – the observation of which is unprecedented in the region – and may have been exacerbated by low residual silicic acid. The novel presence of P. australis may be due to local growth conditions, the introduction of a population with an anomalous water mass, or both factors. A definitive cause of the 2016 bloom remains unknown, and continued DA monitoring in the GOM is warranted.

Description: This research was funded by the National Science Foundation (Grant Numbers OCE-1314642 and OCE-1840381), the National Institute of Environmental Health Sciences (Grant Numbers P01 ES021923-01 and P01 ES028938-01), the Woods Hole Center for Oceans and Human Health, the Academic Programs Office of the Woods Hole Oceanographic Institution, the National Oceanic and Atmospheric Administration's Ecology and Oceanography of HABs (ECOHAB) project (contribution number ECO947), and the National Oceanic and Atmospheric Administration’s HAB Event Response Program (Grant numbers NA06NOS4780245 and NA09NOS4780193). We thank Maura Thomas at the University of Maine for support with nutrient collection and analysis. We also thank Kohl Kanwit at the Maine Department of Marine Resources, Anna Farrell, Jane Disney, and Hannah Mogenson at the Mt. Desert Island Biological Laboratory, Steve Archer at Bigelow Laboratory for Ocean sciences, and Bruce Keafer at the Woods Hole Oceanographic Institution for their work collecting samples and data used in the study. We also thank Maya Robert, Christina Chadwick, Laura Markley, Stephanie Keller Abbe, Karen Henschen, Emily Olesin, Steven Bruzek, Sheila O'Dea, April Granholm, Leanne Flewelling, and Elizabeth Racicot at the Florida Fish and Wildlife Conservation Commission-Fish and Wildlife Research Institute for processing samples for DA, DNA-based analyses, and cellular abundance.[CG]

Description: Author Posting. © National Academy of Sciences, 2019. This article is posted here by permission of National Academy of Sciences for personal use, not for redistribution. The definitive version was published in Proceedings of the National Academy of Sciences 116(45), (2019): 22518-22525, doi:10.1073/pnas.1913714116.

Description: The Ganges–Brahmaputra (G-B) River system transports over a billion tons of sediment every year from the Himalayan Mountains to the Bay of Bengal and has built the world’s largest active sedimentary deposit, the Bengal Fan. High sedimentation rates drive exceptional organic matter preservation that represents a long-term sink for atmospheric CO2. While much attention has been paid to organic-rich fine sediments, coarse sediments have generally been overlooked as a locus of organic carbon (OC) burial. However, International Ocean Discovery Program Expedition 354 recently discovered abundant woody debris (millimeter- to centimeter-sized fragments) preserved within the coarse sediment layers of turbidite beds recovered from 6 marine drill sites along a transect across the Bengal Fan (∼8°N, ∼3,700-m water depth) with recovery spanning 19 My. Analysis of bulk wood and lignin finds mostly lowland origins of wood delivered episodically. In the last 5 My, export included C4 plants, implying that coarse woody, lowland export continued after C4 grassland expansion, albeit in reduced amounts. Substantial export of coarse woody debris in the last 1 My included one wood-rich deposit (∼0.05 Ma) that encompassed coniferous wood transported from the headwaters. In coarse layers, we found on average 0.16 weight % OC, which is half the typical biospheric OC content of sediments exported by the modern G-B Rivers. Wood burial estimates are hampered by poor drilling recovery of sands. However, high-magnitude, low-frequency wood export events are shown to be a key mechanism for C burial in turbidites.

Description: This work was funded by National Science Foundation Grants OCE-1401217 and COL-T354A55 to S.J.F. and OCE-1400805 to V.G. Graduate student participation in the project received support from University of Southern California Provost’s Fellowship to H.L. Samples were provided by the International Ocean Discovery Program. We are grateful for the efforts of the Expedition 354 Science Party, Carl Johnson, and Zongguang Liu. C.F.-L. and A.G. were supported by IODP-France. We thank Colin Osborne and Maria Vorontsova for helpful discussions.

Description: 2020-04-21

Description: Histone modifications such as methylation of key lysine residues play an important role in embryonic development in a variety of organisms such as of Pacific oysters, zebrafish and mice. The action of demethylase ("erasers") and methyltransferase ("writers") enzymes regulates precisely the methylation status of each lysine residue. However, despite fishes being very useful model organisms in medicine, evolution and ecotoxicology, most studies have focused on mammalian and plant model organisms, and mechanisms underlying regulation of histones are unknown in fish development outside of zebrafish. Here, putative histone lysine demethylases (Kdm) and methyltransferases (Kmt) were identified in an isogenic lineage of the self-fertilizing hermaphroditic vertebrate, the mangrove rivulus fish, Kryptolebias marmoratus. Evolutionary relationships with other animal demethylases and methyltransferases were examined, and expression patterns during embryonic development and in adult tissues were characterized. Twenty-five Kdm orthologues (Jarid2, Jmjd1c, Jmjd4, Jmjd6, Jmjd7, Jmjd8, Kdm1a, Kdm1b, Kdm2a, Kdm2b, Kdm3b, Kdm4a, Kdm4b, Kdm4c, Kdm5a, Kdm5b, Kdm5c, Kdm6a, Kdm6b, Kdm7a, Kdm8, Kdm9, UTY, Phf2 and Phf8) and forty-eight Kmt orthologues (Ezh1, Ezh2, Setd2, Nsd1, Nsd2, Nsd3, Ash1l, Kmt2e, Setd5, Prdm1, Prdm2, Prdm4, Prdm5, Prdm6, Prdm8, Prdm9, Prdm10, Prdm11, Prdm12, Prdm13, Prdm14, Prdm15, Prdm16, Setd3, Setd4, Setd6, Setd1a, Setd1b, Kmt2a, Kmt2b, Kmt2c, Kmt2d, Kmt5a, Kmt5b, Ehmt1, Ehmt2, Suv39h1, Setmar, Setdb1, Setdb2, Smyd1, Smyd2, Smyd3, Smyd4, Smyd5, Setd7, Setd9, Dot1l) were discovered. Expression patterns of both Kdm and Kmt were variable during embryonic development with a peak in gastrula stage and a reduction in later embryogenesis. Expression of both Kdm and Kmt was higher in male brains compared to hermaphrodite brains whereas specific expression patterns of Kdm and Kmt were observed in the hermaphrodite ovotestes and male testes, respectively. Putative histone demethylases (Kdm) and methyltransferases (Kmt) were for the first time characterized in a teleost besides zebrafish, the mangrove rivulus. Their domain conservation and expression profiles suggest that they might play important roles during development, gametogenesis and neurogenesis, which raises questions about epigenetic regulation of these processes by histone lysine methylation in K. marmoratus. Due to its peculiar mode of reproduction and the natural occurrence of isogenic lineages, this new model species is of great interest for understanding epigenetic contributions to the regulation of development and reproduction.

Description: During gametogenesis and embryonic development, precise regulation of gene expression, across cell/tissue types and over time, is crucial. In vertebrates, transcription is partly regulated by histone lysine acetylation/ deacetylation, an epigenetic mechanism mediated by lysine acetyltransferases (KAT) and histone deacetylases (HDAC). Well characterized in mammals, these enzymes are unknown in fish embryology outside of zebrafish development. Here, we characterized putative KAT and HDAC enzymes in the self-fertilizing mangrove rivulus fish, Kryptolebias marmoratus, a species that naturally self-fertilizes and can produce isogenic lineages. This unique feature provides an opportunity to elucidate the role of epigenetic mechanisms as a source of phenotypic plasticity. In this study, twenty-seven KAT and seventeen HDAC genes have been identified. Their conserved domains and their phylogenetic analysis suggest conservation of the enzymes' activity in our species, relative to other vertebrates in which the enzymes have been characterized. Furthermore, the dynamics of KAT and HDAC mRNA expression during embryogenesis, in adult gonads and brains, argues for a putative biological function in early and late development as well as in male/hermaphrodite gametogenesis and adult neurogenesis. Our study aimed to provide a basis about the epigenetic actors putatively regulating histone acetylation in a self-fertilizing fish, the mangrove rivulus. Unique among vertebrates, the great number of isogenic lineages occurring naturally in this species allows exploring the contribution of the enzymes regulating histone acetylation only to reproduction and development in teleost fishes, which are very powerful models in fundamental and applied researches that include aquaculture, ecotoxicology, behaviour, evolution, sexual determinism and human diseases.

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(8), (2019): 5313-5335, doi:10.1029/2019JC015014.

Description: The Lagrangian method—where current location and intensity are determined by tracking the movement of flow along its path—is the oldest technique for measuring the ocean circulation. For centuries, mariners used compilations of ship drift data to map out the location and intensity of surface currents along major shipping routes of the global ocean. In the mid‐20th century, technological advances in electronic navigation allowed oceanographers to continuously track freely drifting surface buoys throughout the ice‐free oceans and begin to construct basin‐scale, and eventually global‐scale, maps of the surface circulation. At about the same time, development of acoustic methods to track neutrally buoyant floats below the surface led to important new discoveries regarding the deep circulation. Since then, Lagrangian observing and modeling techniques have been used to explore the structure of the general circulation and its variability throughout the global ocean, but especially in the Atlantic Ocean. In this review, Lagrangian studies that focus on pathways of the upper and lower limbs of the Atlantic Meridional Overturning Circulation (AMOC), both observational and numerical, have been gathered together to illustrate aspects of the AMOC that are uniquely captured by this technique. These include the importance of horizontal recirculation gyres and interior (as opposed to boundary) pathways, the connectivity (or lack thereof) of the AMOC across latitudes, and the role of mesoscale eddies in some regions as the primary AMOC transport mechanism. There remain vast areas of the deep ocean where there are no direct observations of the pathways of the AMOC.

Description: The authors extend their thanks to Xiaobiao Xu for valuable comments on the first draft of this manuscript. A. B. (WHOI), H. F., M. S. L., N. F., and K. D. were supported by Overturning in the Subpolar North Atlantic Program grants OCE‐1259618, OCE‐1259013, and OCE‐1259102 from the U.S. National Science Foundation. S. Z. was supported by the Climate Program Office of the National Oceanic and Atmospheric Administration under award NA16OAR4310168. M. L. was supported through the MOVE project, funded by NOAA's Global Ocean Monitoring and Observing Program under award NA15OAR4320071. A. B. (GEOMAR) and S. R. received funding from the Cluster of Excellence 80 “The Future Ocean” within the framework of the Excellence Initiative by the Deutsche Forschungsgemeinschaft (DFG) on behalf of the German federal and state governments (grant CP1412) and by the German Federal Ministry of Education and Research (BMBF) for the SPACES projects AGULHAS (grant 03F0750A) and CASISAC (grant 03F0796A). No new data are reported in this project. The data mentioned in the text may be found in repositories cited in each previously published paper cited in this review manuscript.

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 46(3), (2019):1702-1708. doi:10.1029/2018GL081087.

Description: After leaving the U.S. East Coast, the northward flowing Gulf Stream (GS) becomes a zonal jet and carries along its frontal characteristics of strong flow and sea surface temperature gradients into the North Atlantic at midlatitudes. The separation location where it leaves the coast is also an anchor point for the wintertime synoptic storm track across North America to continue to develop and head across the ocean. We examine the meridional variability of the separated GS path on interannual to decadal time scales as an agent for similar changes in the storm track and blocking variability at midtroposphere from 1979 to 2012. We find that periods of northerly (southerly) GS path are associated with increased (suppressed) excursions of the synoptic storm track to the northeast over the Labrador Sea and reduced (enhanced) Greenland blocking. In both instances, GS shifts lead those in the midtroposphere by a few months.

Description: Our research has been conducted with the support of NSF (AGS‐1355339, OCE‐1419235, and OCE‐1242989), NASA (NNX13AM59G), and NOAA CPO Climate Variability and Predictability Program (NA13OAR4310139) grants to the Woods Hole Oceanographic Institution. We also thank three reviewers for their insightful comments on an earlier draft of this manuscript. Quarterly estimates of our Gulf Stream Index are available as a data file in the supporting information.

Description: 2019-07-29

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 46(5), (2019):2704-2714, doi:10.1029/2019GL081919.

Description: Seismic images and glider sections of the Gulf Stream front along the U.S. eastern seaboard capture deep, lens‐shaped submesoscale features. These features have radii of 5–20 km, thicknesses of 150–300 m, and are located at depths greater than 500 m. These are typical signatures of anticyclonic submesoscale coherent vortices. A submesoscale‐resolving realistic simulation, which reproduces submesoscale coherent vortices with the same characteristics, is used to analyze their generation mechanism. Submesoscale coherent vortices are primarily generated where the Gulf Stream meets the Charleston Bump, a deep topographic feature, due to the frictional effects and intense mixing in the wake of the topography. These submesoscale coherent vortices can transport waters from the Charleston Bump's thick bottom mixed layer over long distances and spread them within the subtropical gyre. Their net effect on heat and salt distribution remains to be quantified.

Description: J. G. gratefully acknowledges support from the French government, managed by the French National Agency for Research (ANR), through programs ISblue (ANR‐17‐EURE‐0015) and LabexMER (ANR‐10‐LABX‐19) and from LEFE/IMAGO through the project AO2017‐994457‐RADII. Simulations were performed using HPC resources from GENCI‐TGCC (grant 2017‐A0010107638). Simulations output is available upon request. Seismic data were processed using the Echos software package by Paradigm, Matlab, and Generic Mapping Tools. The Eastern North America Margin Community Seismic Experiment was funded by the National Science Foundation under grant OCE‐1347498 and UNOLS; cruise data are freely available via the Marine Geoscience Data System Academic Seismic Portal at Lamont‐Doherty Earth Observatory (http://www.marine-geo.org/portals/seismic/). Spray glider observations in the Gulf Stream are available from http://spraydata.ucsd.edu and should be cited using the following DOI (10.21238/S8SPRAY2675; Todd & Owens, 2016). Spray glider operations were funded by the National Science Foundation (OCE‐1633911) and the Office of Naval Research (N000141713040).

Description: 2019-08-27

Description: A© The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Cedarholm, E. R., Rypina, I. I., Macdonald, A. M., & Yoshida, S. Investigating subsurface pathways of Fukushima cesium in the Northwest Pacific. Geophysical Research Letters, 46(12), (2019): 6821-6829, doi:10.1029/2019GL082500.

Description: Advective pathways for Fukushima Daiichi Nuclear Power Plant (FDNPP)‐derived cesium observed in 2013 at 166°E south of the Kuroshio Extension (KE) at 〉500 m on the 26.5σθ isopycnal are investigated. Attention is paid to the KE's role in shaping these pathways. Using a high‐resolution model, particle trajectories were simulated backward and forward in time on 26.5σθ between the 2013 observations and the 2011 source. A large fraction of backtracked trajectories interacted with the mixed layer just offshore of the FDNPP. The likeliest pathway reaching the deepest 2013 observed cesium location runs along the KE out to ~165°E, where it turns sharply southward. Forward trajectory statistics suggest that for 26.5σθ waters originating north of the KE, this current acted as a permeable barrier west of 155–160°E. The deepest 2011 model mixed layers suggest that FDNPP‐derived radionuclides may have been present at 30°N in 2013 at greater depths and densities (700 m; 26.8σθ).

Description: We would like to thank our two anonymous reviewers for their insightful suggestions that improved this paper. Work by Cedarholm on this project was supported by the WHOI Summer Student Fellowship program and was her UNH senior Capstone project. Rypina, Macdonald, and Yoshida acknowledge salary and project support from the National Science Foundation (NSF) grant OCE‐1356630. Additionally, Rypina would like to acknowledge support from NSF grant OCE‐1558806. CLIVAR PO2 and P10 observations, data sets 318M20130321 and 49NZ2012011, were obtained from the CCHDO (https://cchdo.ucsd.edu/) and the HYCOM output, data set GLBa0.08 expt_90.0v, from https://www.hycom.org/. Argo profiles were obtained from http://www.argodatamgt.org, the ISAS‐15 0.5°gridded Argo‐data‐alone product from https://www.seanoe.org, and delayed‐time allsat AVISO gridded surface velocity estimates from http://marine.copernicus.eu. Extended acknowledgements in Text S4.

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(6), (2019): 3987-4002, doi:10.1029/2019JC015134.

Description: Mooring data from September 2011 to July 2013 on the Iceland slope north of Denmark Strait are analyzed to better understand the structure and variability of the North Icelandic Jet (NIJ). Three basic configurations of the flow were identified: (1) a strong separated East Greenland Current (EGC) on the mid‐Iceland slope coincident with a weak NIJ on the upper slope, (2) a merged separated EGC and NIJ, and (3) a strong NIJ located at its climatological mean position, coincident with a weak signature of the separated EGC at the base of the Iceland slope. Our study reveals that the NIJ‐dominant scenario was present during different times of the year for the two successive mooring deployments—appearing mainly from September to February the first year and from January to July the second year. Furthermore, when this scenario was active it varied on short timescales. An energetics analysis demonstrates that the high‐frequency variability is driven by mean‐to‐eddy baroclinic conversion at the shoreward edge of the NIJ, consistent with previous modeling work. The seasonal timing of the NIJ dominant scenario is investigated in relation to the atmospheric forcing upstream of Denmark Strait. The resulting lagged correlations imply that strong turbulent heat fluxes in a localized region on the continental slope of Iceland, south of the Spar Fracture zone, lead to a stronger NIJ dominant state with a two‐month lag. This can be explained dynamically in terms of previous modeling work addressing the circulation response to dense water formation near an island.

Description: The authors thank the crew members of the R/V Knorr, RRS James Clark Ross, and R/V Bjarni Sæmundsson for the deployment and recovery of the moorings. D. Torres and F. Bahr processed the second year of mooring data. We thank K. Våge, B. Harden, Z. Song, J. Li, and M. Li for helpful discussions regarding the work. Funding was provided by the National Science Foundation under grants OCE‐1558742 (J. H., R. P., P. L., and M. S.) and OCE‐1534618 (M. S.). The mooring data are available at http://kogur.whoi.edu/php/index.php.

Description: 2019-12-04

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Earth and Space Science, 6(7), (2019): 1220-1233, doi:10.1029/2018EA000436.

Description: Ocean evaporative fluxes are a critical component of the Earth's energy and water cycle, but their estimation remains uncertain. Near‐surface humidity is a required input to bulk flux algorithms that relate mean surface values to the turbulent fluxes. Several satellite‐derived turbulent flux products have been developed over the last decade that utilize passive microwave imager observations to estimate the surface humidity. It is known, however, that these estimates tend to diverge from one another and from in situ observations. Analysis of current state‐of‐the‐art satellite estimates provided herein reveals that regional‐scale biases in these products remain significant. Investigations reveal a link between the spatial coherency of the observed biases to atmospheric dynamical controls of water vapor vertical stratification, cloud liquid water, and sea surface temperature. This information is used to develop a simple state‐dependent bias correction that results in more consistent ocean surface humidity estimates. A principal conclusion is that further improvements to ocean near‐surface humidity estimation using microwave radiometers requires incorporation of prior information on water vapor stratification and sea surface temperature.

Description: Data products used in this study are made publicly available via multiple repositories hosted by individual data product producers. JOFUROv2 and JOFUROv3 data are available online (https://j‐ofuro.scc.u‐tokai.ac.jp/en/). IFREMERv4 and NOCS surface data are available through the OceanHeatFlux project (https://www.ifremer.fr/oceanheatflux/Data). GSSTFv3 (doi:10.5067/MEASURES/GSSTF/DATA301) and MERRA‐2 data are obtained from the Goddard Earth Sciences Data and Information Services Center. HOAPSv3.2 data are available from Satellite Application Facility on Climate Monitoring (https://doi.org/10.5676/EUM_SAF_CM/HOAPS/V001). SEAFLUXv2 data are accessed through the National Centers for Environmental Information (http://doi.org/10.7289/V59K4885). Daily surface observations were provided by David Berry and Elizabeth Kent. This work is supported under the NASA Physical Oceanography Program Grant NNX14AK48A.

Description: Author Posting. © American Geophysical Union, 20XX. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 46(12), (2019): 6435-6442, doi:10.1029/2019GL082523.

Description: Acoustic Doppler current profiler and conductivity‐temperature‐depth data acquired in Yellowstone Lake reveal the presence of a buoyant plume above the “Deep Hole” hydrothermal system, located southeast of Stevenson Island. Distributed venting in the ~200 × 200‐m hydrothermal field creates a plume with vertical velocities of ~10 cm/s in the mid‐water column. Salinity profiles indicate that during the period of strong summer stratification the plume rises to a neutral buoyancy horizon at ~45‐m depth, corresponding to a ~70‐m rise height, where it generates an anomaly of ~5% (−0.0014 psu) relative to background lake water. We simulate the plume with a numerical model and find that a heat flux of 28 MW reproduces the salinity and vertical velocity observations, corresponding to a mass flux of 1.4 × 103 kg/s. When observational uncertainties are considered, the heat flux could range between 20 to 50 MW.

Description: The authors thank Yellowstone National Park Fisheries and Aquatic Sciences, The Global Foundation for Ocean Exploration, and Paul Fucile for logistical support. This research was supported by the National Science Foundation grants EAR‐1516361 to R. S., EAR‐1514865 to K. L., and EAR‐1515283 to R. H. and J. F. All work in Yellowstone National Park was completed under an authorized Yellowstone research permit (YELL‐2018‐SCI‐7018). CTD and ADCP profiles reported in this paper are available through the Marine Geoscience Data System (doi:10.1594/IEDA/324713 and doi:10.1594/IEDA/324712, accessed last on 17 April 2019, respectively).

Description: 2019-11-09

Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Proceedings of the National Academy of Sciences.of the United States of America 116(36), (2019): 17666-17672. doi:10.1073/pnas.1907871116.

Description: The conditions of methane (CH4) formation in olivine-hosted secondary fluid inclusions and their prevalence in peridotite and gabbroic rocks from a wide range of geological settings were assessed using confocal Raman spectroscopy, optical and scanning electron microscopy, electron microprobe analysis, and thermodynamic modeling. Detailed examination of 160 samples from ultraslow- to fast-spreading midocean ridges, subduction zones, and ophiolites revealed that hydrogen (H2) and CH4 formation linked to serpentinization within olivine-hosted secondary fluid inclusions is a widespread process. Fluid inclusion contents are dominated by serpentine, brucite, and magnetite, as well as CH4(g) and H2(g) in varying proportions, consistent with serpentinization under strongly reducing, closed-system conditions. Thermodynamic constraints indicate that aqueous fluids entering the upper mantle or lower oceanic crust are trapped in olivine as secondary fluid inclusions at temperatures higher than ∼400 °C. When temperatures decrease below ∼340 °C, serpentinization of olivine lining the walls of the fluid inclusions leads to a near-quantitative consumption of trapped liquid H2O. The generation of molecular H2 through precipitation of Fe(III)-rich daughter minerals results in conditions that are conducive to the reduction of inorganic carbon and the formation of CH4. Once formed, CH4(g) and H2(g) can be stored over geological timescales until extracted by dissolution or fracturing of the olivine host. Fluid inclusions represent a widespread and significant source of abiotic CH4 and H2 in submarine and subaerial vent systems on Earth, and possibly elsewhere in the solar system.

Description: We are indebted to J. Eckert for his support with FE-EMPA; to K. Aquinho and E. Codillo for providing samples from Zambales; to K. Aquinho for Raman analysis of some of the samples from Zambales and Mt. Dent; to H. Dick for providing access to his thin section collection; to the curators of the IODP core repositories for providing access to Ocean Drilling Program (ODP) and Integrated Ocean Drilling Program (IODP) samples; and to the captains and crews of the many cruises without whom the collection of these samples would not have been possible. Reviews by Peter Kelemen and an anonymous referee greatly improved this manuscript. This study is supported with funds provided by the National Science Foundation (NSF-OCE Award 1634032 to F.K. and J.S.S.).

Description: 2020-02-19

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Global Biogeochemical Cycles 32(12), (2019): 1759-1775, doi:10.1029/2018GB006026.

Description: Karst subterranean estuaries (KSEs) extend into carbonate platforms along 12% of all coastlines. A recent study has shown that microbial methane (CH4) consumption is an important component of the carbon cycle and food web dynamics within flooded caves that permeate KSEs. In this study, we obtained high‐resolution (~2.5‐day) temporal records of dissolved methane concentrations and its stable isotopic content (δ13C) to evaluate how regional meteorology and hydrology control methane dynamics in KSEs. Our records show that less methane was present in the anoxic fresh water during the wet season (4,361 ± 89 nM) than during the dry season (5,949 ± 132 nM), suggesting that the wet season hydrologic regime enhances mixing of methane and other constituents into the underlying brackish water. The δ13C of the methane (−38.1 ± 1.7‰) in the brackish water was consistently more 13C‐enriched than fresh water methane (−65.4 ± 0.4‰), implying persistent methane oxidation in the cave. Using a hydrologically based mass balance model, we calculate that methane consumption in the KSE was 21–28 mg CH4·m−2·year−1 during the 6‐month dry period, which equates to ~1.4 t of methane consumed within the 102‐ to 138‐km2 catchment basin for the cave. Unless wet season methane consumption is much greater, the magnitude of methane oxidized within KSEs is not likely to affect the global methane budget. However, our estimates constrain the contribution of a critical resource for this widely distributed subterranean ecosystem.

Description: Funding for T. M. I. and D. B. was provided by TAMU‐CONACYT (project 2015‐049). D. B. was supported by the Research‐in‐Residence program (NSF award 1137336, Inter‐university Training in Continental‐scale Ecology), the Boost Fellowship (Texas A&M University at Galveston), and the Postdoctoral Scholar Program by Woods Hole Oceanographic Institution and U.S. Geological Survey. We thank Jacob Pohlman and István Brankovits for assistance with field expeditions. Special thanks to the late Bil Phillips (Speleotech) for the support and expertise provided us during field operations. We also thank Pete van Hengstum for productive discussions and guidance during the development of the manuscript. Michael Casso and Adrian Green helped with laboratory analyses. The manuscript was greatly improved by helpful comments from an anonymus reviewer, Jeff Chanton, and Meagan Gonneea. This work is contribution number UMCES 5541. Any use of trade names is for descriptive purposes and does not imply endorsement by the U.S. Government. The authors declare no competing financial interests. Archival data are available through the USGS ScienceBase‐Catalog at https://doi.org/10.5066/P9U0KRVM.

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 46(7) (2019): 3927-3935, doi: 10.1029/2018GL081593.

Description: Climate model simulations of the summer South Asian monsoon predict increased rainfall in response to anthropogenic warming. However, instrumental data show a decline in Indian rainfall in recent decades, underscoring the critical need for additional, independent records of past monsoon variability. Here, we present new reconstructions of annual summer South Asian Monsoon circulation over the past 250 years, based on the geochemical barium‐calcium signature of dust present in Red Sea corals. These records reveal how monsoon circulation has evolved with warming climate and indicate a significant multi‐century long monsoon intensification, with decreased multidecadal variance. Stronger monsoon circulation would have increased the moisture transport from the Arabian Sea and Bay of Bengal over the Indian subcontinent. If these trends continue, the monsoon circulation and associated moisture transport and precipitation will remain strong and stable for several decades.

Description: We thank Editor Valerie Trouet and two anonymous reviewers for their constructive comments. We gratefully acknowledge Justin Ossolinski for assistance during core drilling; Maureen Auro, Laura Robinson, and Tom Marchitto for use of lab space and for technical advice; Margaret Sulanowska for providing XRD analysis of dust samples; and Sujata Murty and Ryan Davis for assistance in the lab. We thank Falmouth Hospital for use of X‐ray equipment. We acknowledge the use of the NSF‐supported WHOI ICP‐MS facility and thank Scot Birdwhistell for his assistance. This research was supported by grants to K. A. H. from NSF award OCE‐1031288 and KAUST award USA00002, and by a WHOI Postdoctoral Fellowship awarded to S. P. B. All data presented in this manuscript will be made publicly available online through the NOAA NCDC Paleoclimatology data archive (https://www.ncdc.noaa.gov/data‐access/paleoclimatology‐data/).

Description: 2019-09-28

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 46(6), (2019):3398-3407, doi:10.1029/2018GL080890.

Description: The hazards posed by infrequent major floods to communities along the Susquehanna River and the ecological health of Chesapeake Bay remain largely unconstrained due to the short length of streamgage records. Here we develop a history of high‐flow events on the Susquehanna River during the late Holocene from flood deposits contained in MD99‐2209, a sediment core recovered in 26 m of water from Chesapeake Bay near Annapolis, Maryland, United States. We identify coarse‐grained deposits left by Hurricane Agnes (1972) and the Great Flood of 1936, as well as during three intervals that predate instrumental flood records (~1800–1500, 1300–1100, and 400–0 CE). Comparison to sedimentary proxy data (pollen and ostracode Mg/Ca ratios) from the same core site indicates that prehistoric flooding on the Susquehanna often accompanied cooler‐than‐usual winter/spring temperatures near Chesapeake Bay—typical of negative phases of the North Atlantic Oscillation and conditions thought to foster hurricane landfalls along the East Coast.

Description: This work was supported by the USGS Land Change Science Program and Northeast Region. We appreciated the assistance of Brian Buczkowski, Andrew Zimmerman, and John Bratton in locating archived core materials and data sets. We thank John Jackson and Bryan Landacre for assistance with XRD and pollen analysis, respectively. We thank two anonymous reviewers, Lynn Wingard (USGS), and Rob Stamm (USGS) for their helpful feedback on earlier versions of this manuscript. Any use of trade, firm, or product names is for descriptive purposes only and does not imply endorsement by the U.S. Government. Data generated for this report can be found in the accompanying supporting information.

Description: 2019-08-19

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Global Biogeochemical Cycles 32(12), (2019): 1738-1758, doi:10.1029/2018GB005994.

Description: Sinking particles strongly regulate the distribution of reactive chemical substances in the ocean, including particulate organic carbon and other elements (e.g., P, Cd, Mn, Cu, Co, Fe, Al, and 232Th). Yet, the sinking fluxes of trace elements have not been well described in the global ocean. The U.S. GEOTRACES campaign in the North Atlantic (GA03) offers the first data set in which the sinking flux of carbon and trace elements can be derived using four different radionuclide pairs (238U:234Th ;210Pb:210Po; 228Ra:228Th; and 234U:230Th) at stations co‐located with sediment trap fluxes for comparison. Particulate organic carbon, particulate P, and particulate Cd fluxes all decrease sharply with depth below the euphotic zone. Particulate Mn, Cu, and Co flux profiles display mixed behavior, some cases reflecting biotic remineralization, and other cases showing increased flux with depth. The latter may be related to either lateral input of lithogenic material or increased scavenging onto particles. Lastly, particulate Fe fluxes resemble fluxes of Al and 232Th, which all have increasing flux with depth, indicating a dominance of lithogenic flux at depth by resuspended sediment transported laterally to the study site. In comparing flux estimates derived using different isotope pairs, differences result from different timescales of integration and particle size fractionation effects. The range in flux estimates produced by different methods provides a robust constraint on the true removal fluxes, taking into consideration the independent uncertainties associated with each method. These estimates will be valuable targets for biogeochemical modeling and may also offer insight into particle sinking processes.

Description: This study grew out of a synthesis workshop at the Lamont‐Doherty Earth Observatory of Columbia University in August 2016. This workshop was sponsored by the U.S. GEOTRACES Project Office (NSF 1536294) and the Ocean Carbon and Biogeochemistry (OCP) Project Office (NSF 1558412 and NASA NNX17AB17G). The U.S. National Science Foundation supported all of the analytical work on GA03. Kuanbo Zhou measured 228Th in the large size class particles (NSF 0925158 to WHOI). NSF 1061128 to Stony Brook University supported the BaRFlux project, for which Chistina Heilbrun is acknowledged for laboratory and field work. The lead author acknowledges support from a start‐up grant from the University of Southern Mississippi. Two anonymous reviewers are thanked for their constructive comments. All GEOTRACES GA03 data used in this study are accessible through the Biological and Chemical Oceanography Data Management Office (http://data.bco‐dmo.org/jg/dir/BCO/GEOTRACES/NorthAtlanticTransect/), and derived parameters are reported in the supporting information.

Description: 2019-05-22

Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Bodini, N., Lundquist, J. K., & Kirincich, A. US East Coast lidar measurements show offshore wind turbines will encounter very low atmospheric turbulence. Geophysical Research Letters, 46(10), (2019):5582-5591, doi:10.1029/2019GL082636.

Description: The rapid growth of offshore wind energy requires accurate modeling of the wind resource, which can be depleted by wind farm wakes. Turbulence dissipation rate (ϵ) governs the accuracy of model predictions of hub‐height wind speed and the development and erosion of wakes. Here we assess the variability of turbulence kinetic energy and ϵ using 13 months of observations from a profiling lidar deployed on a platform off the Massachusetts coast. Offshore, ϵ is 2 orders of magnitude smaller than onshore, with a subtle diurnal cycle. Wind direction influences the annual cycle of turbulence, with larger values in winter when the wind flows from the land, and smaller values in summer, when the wind flows from open ocean. Because of the weak turbulence, wind plant wakes will be stronger and persist farther downwind in summer.

Description: Collection of the wind data was funded by the Massachusetts Clean Energy Center through agreements with WHOI and AWS Truepower. The authors appreciate the efforts of the MVCO/ASIT technicians and AWS staff who collected the data. This analysis was supported by the National Science Foundation CAREER Award (AGS‐1554055) to J. K. L. and N. B., and by internal funds from WHOI for A. K. This work was authored (in part) by the National Renewable Energy Laboratory, operated by Alliance for Sustainable Energy, LLC, for the U.S. Department of Energy (DOE) under Contract DE‐AC36‐08GO28308. Funding was provided by the U.S. Department of Energy Office of Energy Efficiency and Renewable Energy Wind Energy Technologies Office. The views expressed in the article do not necessarily represent the views of the DOE or the U.S. Government. The U.S. Government retains and the publisher, by accepting the article for publication, acknowledges that the U.S. Government retains a nonexclusive, paid‐up, irrevocable, worldwide license to publish or reproduce the published form of this work, or allow others to do so, for U.S. Government purposes. The lidar observations used here are described at https://www.masscec.com/masscec-metocean-data-initiative, and available at https://doi.org/10.26025/1912/24050. The postprocessed data and the scripts used for the Figures of the present paper can be found at https://github.com/nicolabodini/GRL_OffshoreTurbulence.

Description: 2019-11-01

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(4), (2019):2750-2768, doi: 10.1029/2018JC014635.

Description: The advances in the modern sea level observing system have allowed for a new level of knowledge of regional and global sea level in recent years. The combination of data from satellite altimeters, Gravity Recovery and Climate Experiment (GRACE) satellites, and Argo profiling floats has provided a clearer picture of the different contributors to sea level change, leading to an improved understanding of how sea level has changed in the present and, by extension, may change in the future. As the overlap between these records has recently extended past a decade in length, it is worth examining the extent to which internal variability on timescales from intraseasonal to decadal can be separated from long‐term trends that may be expected to continue into the future. To do so, a combined modal decomposition based on cyclostationary empirical orthogonal functions is performed simultaneously on the three data sets, and the dominant shared modes of variability are analyzed. Modes associated with the trend, seasonal signal, El Niño–Southern Oscillation, and Pacific decadal oscillation are extracted and discussed, and the relationship between regional patterns of sea level change and their associated global signature is highlighted.

Description: The satellite altimetry grids are available from NASA JPL/PO.DAAC at the following location: https://podaac.jpl.nasa.gov/dataset. GRACE land water storage data are available at http://grace.jpl.nasa.gov, supported by the NASA MEaSUREs Program. The gridded fields based on Argo data used to compute the steric sea level data are available at http://www.argo.ucsd.edu/Gridded_fields.html. The gridded fields based on Argo data used to compute the steric sea level data are available at http://www.argo.ucsd.edu/Gridded_fields.html. The research was carried out at the Jet Propulsion Laboratory, California Institute of Technology, under a contract with the National Aeronautics and Space Administration. B. D. H., F. W. L., J. T. R., and P. R. T. acknowledge support from NASA grant 80NSSC17K0564 (NASA Sea Level Change Team). C. G. P. acknowledges support from NSF awards OCE‐1558966 and OCE‐1834739. K. Y. K. was partially supported for this research by the National Science Foundation of Korea under the grant NRF‐ 2017R1A2B4003930.

Description: 2019-09-21

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(4), (2019):2861-2875, doi: 10.1029/2018JC014175.

Description: Strong variability in sea surface salinity (SSS) in the Eastern Tropical Pacific (ETPac) on intraseasonal to interannual timescales was studied using data from the Soil Moisture and Ocean Salinity, Soil Moisture Active Passive, and Aquarius satellite missions. A zonal wave number‐frequency spectral analysis of SSS reveals a dominant timescale of 50–180 days and spatial scale of 8°–20° of longitude with a distinct seasonal cycle and interannual variability. This intraseasonal SSS signal is detailed in the study of 19 individual ETPac eddies over 2010–2016 identified by their sea level anomalies, propagating westward at a speed of about 17 cm/s. ETPac eddies trap and advect water in their core westward up to 40° of longitude away from the coast. The SSS signatures of these eddies, with an average anomaly of 0.5‐pss magnitude difference from ambient values, enable the study of their dynamics and the mixing of their core waters with the surroundings. Three categories of eddies were identified according to the location where they were first tracked: (1) in the Gulf of Tehuantepec, (2) in the Gulf of Papagayo, and (3) in the open ocean near 100°W–12°N. They all traveled westward near 10°N latitude. Category 3 is of particular interest, as eddies seeded in the Gulf of Tehuantepec grew substantially in the vicinity of the Clipperton Fracture Zone rise and in a region where the mean zonal currents have anticyclonic shear. The evolution of the SSS signature associated with the eddies indicates the importance of mixing to their dissipation.

Description: This research was carried out in part at the Jet Propulsion Laboratory (JPL), California Institute of Technology, under a contract with NASA and part at LOCEAN (Sorbonne Université, CNRS, IRD, MNHN) under a CNES Postdoctoral fellowship. This work is supported by NASA Grants NNX11AE83G and NNX14AH38G and is a contribution to the TOSCA/SMOS‐Ocean proposal supported by CNES. We thank the reviewers for their thoughtfully comments that lead to a much‐improved manuscript. We benefited from numerous data sets made freely available and are listed here: The SMOS debias_v2 SSS have been produced by LOCEAN laboratory and ACRI‐st company that participate to the Ocean Salinity Expertise Center (CEC‐OS) of Centre Aval de Traitement des Donnees SMOS (CATDS). of CATDS at IFREMER, Plouzane, France (http://www.catds.fr/Products, see documentation: http://www.catds.fr/Products/Available‐products‐from‐CEC‐OS/L3‐Debiased‐Locean‐v2); the Aquarius/SAC‐D and SMAP data was produced by Remote Sensing Systems and distributed by PODAAC (https://podaac.jpl.nasa.gov/dataset/AQUARIUS_L3_SSS_SMI_7DAY_V4; https://podaac.jpl.nasa.gov/dataset/SMAP_RSS_L3_SSS_SMI_8DAY‐RUNNINGMEAN_V2); the SLA product is processed and distributed by CMEMS (http://marine.copernicus.eu); the global atlas of eddies is produced by AVISO (https://www.aviso.altimetry.fr/en/data/products/value‐added‐products/global‐mesoscale‐eddy‐trajectory‐product.html); the GPCP precipitation data set (http://eagle1.umd.edu/GPCP_CDR/Monthly_Data) is described in the project technical report (http://eagle1.umd.edu/GPCP_ICDR/GPCPmonthlyV2.3.pdf); Woods Hole Oceanographic Institution OAFlux evaporation data set (ftp://ftp.whoi.edu/pub/science/oaflux/data_v3); UCAR high‐resolution terrain data set (High res terrain data set https://rda.ucar.edu/datasets/ds759.2/#!description); Chelton et al. (1998) Global Atlas of the First‐Baroclinic Rossby Radius of Deformation and Gravity‐Wave Phase Speed (http://www‐po.coas.oregonstate.edu/research/po/research/rossby_radius/).

Description: 2019-09-28

Description: Author Posting. © The Author(s), 2019. This is the author's version of the work. It is posted here by permission of National Academy of Sciences for personal use, not for redistribution. The definitive version was published in Proceedings of the National Academy of Sciences of the United States of America 116(20), (2019):9925-9930, doi:10.1073/pnas.1818349116.

Description: Microbial capacity to metabolize arsenic is ancient, arising in response to its pervasive presence in the environment, which was largely in the form of As(III) in the early anoxic ocean. Many biological arsenic transformations are aimed at mitigating toxicity; however, some microorganisms can respire compounds of this redox-sensitive element to reap energetic gains. In several modern anoxic marine systems concentrations of As(V) are higher relative to As(III) than what would be expected from the thermodynamic equilibrium, but the mechanism for this discrepancy has remained unknown. Here we present evidence of a complete respiratory arsenic cycle, consisting of dissimilatory As(V) reduction and chemoautotrophic As(III) oxidation, in the pelagic ocean. We identified the presence of genes encoding both subunits of the respiratory arsenite oxidase AioA and the dissimilatory arsenate reductase ArrA in the Eastern Tropical North Pacific (ETNP) oxygen-deficient zone (ODZ). The presence of the dissimilatory arsenate reductase gene arrA was enriched on large particles (〉30 um), similar to the forward bacterial dsrA gene of sulfate-reducing bacteria, which is involved in the cryptic cycling of sulfur in ODZs. Arsenic respiratory genes were expressed in metatranscriptomic libraries from the ETNP and the Eastern Tropical South Pacific (ETSP) ODZ, indicating arsenotrophy is a metabolic pathway actively utilized in anoxic marine water columns. Together these results suggest arsenic-based metabolisms support organic matter production and impact nitrogen biogeochemical cycling in modern oceans. In early anoxic oceans, especially during periods of high marine arsenic concentrations, they may have played a much larger role.

Description: We thank John Baross and Rika Anderson for helpful discussions and feedback on this project. We also thank the chief scientists of the research cruise, Al Devol and Bess Ward, as well as the captain and crew of the R/V Thomas G. Thompson. This work was supported through a NASA Earth and Space Sciences Graduate Research Fellowship to J.K.S. and National Science Foundation Grant OCE-1138368 (to G.R.).

Description: 2019-10-29

Description: Author Posting. © National Academy of Sciences, 2019. This article is posted here by permission of National Academy of Sciences for personal use, not for redistribution. The definitive version was published in Proceedings of the National Academy of Sciences 116 (24), (2019):11646-11651, doi:10.1073/pnas.1900371116.

Description: Measurements show large decadal variability in the rate of CO2 accumulation in the atmosphere that is not driven by CO2 emissions. The decade of the 1990s experienced enhanced carbon accumulation in the atmosphere relative to emissions, while in the 2000s, the atmospheric growth rate slowed, even though emissions grew rapidly. These variations are driven by natural sources and sinks of CO2 due to the ocean and the terrestrial biosphere. In this study, we compare three independent methods for estimating oceanic CO2 uptake and find that the ocean carbon sink could be responsible for up to 40% of the observed decadal variability in atmospheric CO2 accumulation. Data-based estimates of the ocean carbon sink from pCO2 mapping methods and decadal ocean inverse models generally agree on the magnitude and sign of decadal variability in the ocean CO2 sink at both global and regional scales. Simulations with ocean biogeochemical models confirm that climate variability drove the observed decadal trends in ocean CO2 uptake, but also demonstrate that the sensitivity of ocean CO2 uptake to climate variability may be too weak in models. Furthermore, all estimates point toward coherent decadal variability in the oceanic and terrestrial CO2 sinks, and this variability is not well-matched by current global vegetation models. Reconciling these differences will help to constrain the sensitivity of oceanic and terrestrial CO2 uptake to climate variability and lead to improved climate projections and decadal climate predictions.

Description: We thank Rebecca Wright and Erik Buitenhuis at University of East Anglia, Norwich, for providing updated runs from the NEMO-PlankTOM5 model. T.D. was supported by NSF Grant OCE-1658392. C.L.Q. thanks the UK Natural Environment Research Council for supporting the SONATA Project (Grant NE/P021417/1). P.L. was supported by the Max Planck Society for the Advancement of Science. J.H. was supported under Helmholtz Young Investigator Group Marine Carbon and Ecosystem Feedbacks in the Earth System (MarESys) Grant VH-NG-1301. S.B. and R.S. were supported by the H2020 project CRESCENDO “Coordinated Research in Earth Systems and Climate: Experiments, Knowledge, Dissemination and Outreach,” which received funding from the European Union’s Horizon 2020 research and innovation program under Grant No 641816. SOCAT is an international effort, endorsed by the International Ocean Carbon Coordination Project, the Surface Ocean-Lower Atmosphere Study, and the Integrated Marine Biosphere Research program, to deliver a uniformly quality-controlled surface ocean CO2 database. The many researchers and funding agencies responsible for the collection of data and quality control are thanked for their contributions to SOCAT.

Description: 2019-11-28

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters, 46(8), (2019):4346-4355, doi:10.1029/2018GL081577.

Description: A yearlong record from moored current, temperature, conductivity, and four mixing meters (χpods) in the northernmost international waters of the Bay of Bengal quantifies upper‐ocean turbulent diffusivity of heat (Kt) and its response to the Indian monsoon. Data indicate (1) pronounced intermittency in turbulence at semidiurnal, diurnal, and near‐inertial timescales, (2) strong turbulence above 25‐m depth during the SW (summer) and NE (winter) monsoon relative to the transition periods (compare Kt 〉 10−4 m2/s to Kt  ∼ 10−5 m2/s, and (3) persistent suppression of turbulence (Kt 〈 10−5 m2/s) for 3 to 5 months in the latter half of the SW monsoon coincident with enhanced near‐surface stratification postarrival of low‐salinity water from the Brahmaputra‐Ganga‐Meghna delta and monsoonal precipitation. This suppression promotes maintenance of the low‐salinity surface waters within the interior of the bay preconditioning the upper northern Indian Ocean for the next year's monsoon.

Description: This work was supported by the U.S. Office of Naval Research (ONR) Grants N00014‐14‐1‐0236 and N00014‐17‐1‐2472, and the Ocean Mixing and Monsoon program of the Indian Ministry of Earth Sciences. The deployment of the Woods Hole Oceanographic Institution mooring and RW and JTF were supported by ONR Grant N00014‐13‐1‐0453. The deployment and recovery of the mooring were carried out by RV Sagar Nidhi and RV Sagar Kanya, respectively, with the help of the crew and science parties. Thanks to National Institute of Ocean Technology (India) for buoy support. The authors acknowledge invaluable discussions with Johannes Becherer, Deepak Cherian, and Sally Warner at CEOAS, OSU, and Dipanjan Chaudhuri, J Sree Lekha, and Debasis Sengupta at CAOS, IISc. The authors thank two anonymous reviewers for their detailed reviews, which have helped sharpen many aspects of this paper. Data can be accessed as described in section S2.

Description: 2019-10-08

Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Baltar, F., Bayer, B., Bednarsek, N., Deppeler, S., Escribano, R., Gonzalez, C. E., Hansman, R. L., Mishra, R. K., Moran, M. A., Repeta, D. J., Robinson, C., Sintes, E., Tamburini, C., Valentin, L. E., & Herndl, G. J. Towards integrating evolution, metabolism, and climate change studies of marine ecosystems. Trends in Ecology and Evolution. 34(11), (2019): 1022-1033, doi: 10.1016/j.tree.2019.07.003.

Description: Global environmental changes are challenging the structure and functioning of ecosystems. However, a mechanistic understanding of how global environmental changes will affect ecosystems is still lacking. The complex and interacting biological and physical processes spanning vast temporal and spatial scales that constitute an ecosystem make this a formidable problem. A unifying framework based on ecological theory, that considers fundamental and realized niches, combined with metabolic, evolutionary, and climate change studies, is needed to provide the mechanistic understanding required to evaluate and forecast the future of marine communities, ecosystems, and their services.

Description: This work arose from the international workshop IMBIZO 5: Marine biosphere research for a sustainable ocean: Linking ecosystems, future states and resource management, organized by the IMBeR (Integrated Marine Biosphere Research) Program, and held at the Woods Hole Oceanographic Institution in October 2017. In particular, this work was generated from the working group from Workshop 2: Metabolic diversity and evolution in marine biogeochemical cycling and ocean ecosystem processes. The constructive criticism of three reviewers on a previous version of the manuscript is gratefully acknowledged. F.B. was supported by a Rutherford Discovery Fellowship by the Royal Society of New Zealand. G.J.H. was supported by the Austrian Science Fund (FWF) project ARTEMIS (P28781-B21).

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Solid Earth 124(5), (2019): 4710-4727, doi:10.1029/2018JB017080.

Description: The southernmost Mariana margin lacks a mature island arc and thus differs significantly from the central‐north Mariana and Izu‐Bonin margins. This paper presents a new P wave velocity model of the crust and uppermost mantle structure based on a 349‐km‐long profile of wide‐angle reflection/refraction data. The active source seismic experiment was conducted from the subducting Pacific plate to the overriding Philippine plate, passing through the Challenger Deep. The subducting plate has an average crustal thickness of ~6.0 km with Vp of 7.0 ± 0.2 km/s at the base of the crust and low values of only 5.5–6.9 km/s near the trench axis. The uppermost mantle of the subducting plate is characterized by low velocities of 7.0–7.3 km/s. The overriding plate has a maximum crustal thickness of ~18 km beneath the forearc with Vp of ~7.4 km/s at the crustal bottom and 7.5–7.8 km/s in the uppermost mantle. A zone of slight velocity reduction is imaged beneath the Southwest Mariana Rift that is undergoing active rifting. The observed significant velocity reduction in a near‐trench crustal zone of ~20–30 km in the subducting plate is interpreted as a result of faulting‐induced porosity changes and fracture‐filling fluids. The velocity reduction in the uppermost mantle of both subducting and overriding plates is interpreted as mantle serpentinization with fluid sources from dehydration of the subducting plate and/or fluid penetration along faults.

Description: Data acquisition and sample collections were supported by the Mariana Trench Initiative of the Chinese Academy of Sciences (CAS). We are grateful to the science parties and crews of R/V Shiyan 3 of the South China Sea Institute of Oceanology, CAS, for contributions to data acquisition. Constructive reviews by Robert Stern, Martha Savage, and anonymous reviewers significantly improved the manuscript. We thank Gaohua Zhu, Fan Zhang, Chunfeng Li, Zhen Sun, Zhi Wang, and Minghui Zhao for helpful discussion. The bathymetric maps were plotted using GMT (Wessel & Smith, 1995). Digital files of the velocity models and selected raw data are deposited and accessible online (at https://pan.baidu.com/s/1AbDJOgLZhYn1C‐3sg7S9Xw). This work was supported by the Strategic Priority Program of CAS (XDA13010101), CAS (Y4SL021001, QYZDY‐SSW‐DQC005, and 133244KYSB20180029), Key Laboratory of Ocean and Marginal Sea Geology, CAS (OMG18‐03), National Natural Science Foundation of China (41890813, 41676042, U1701641, 91628301, 41576041, and U1606401), and HKSAR Research Grant Council grants (14313816).

Description: 2019-10-05

Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in DeGrandpre, M. D., Lai, C., Timmermans, M., Krishfield, R. A., Proshutinsky, A., & Torres, D. Inorganic carbon and pCO(2) variability during ice formation in the Beaufort Gyre of the Canada Basin. Journal of Geophysical Research-Oceans, 124(6), (2019): 4017-4028, doi:10.1029/2019JC015109.

Description: Solute exclusion during sea ice formation is a potentially important contributor to the Arctic Ocean inorganic carbon cycle that could increase as ice cover diminishes. When ice forms, solutes are excluded from the ice matrix, creating a brine that includes dissolved inorganic carbon (DIC) and total alkalinity (AT). The brine sinks, potentially exporting DIC and AT to deeper water. This phenomenon has rarely been observed, however. In this manuscript, we examine a ~1 year pCO2 mooring time series where a ~35‐μatm increase in pCO2 was observed in the mixed layer during the ice formation period, corresponding to a simultaneous increase in salinity from 27.2 to 28.5. Using salinity and ice based mass balances, we show that most of the observed increases can be attributed to solute exclusion during ice formation. The resulting pCO2 is sensitive to the ratio of AT and DIC retained in the ice and the mixed layer depth, which controls dilution of the ice‐derived AT and DIC. In the Canada Basin, of the ~92 μmol/kg increase in DIC, 17 μmol/kg was taken up by biological production and the remainder was trapped between the halocline and the summer stratified surface layer. Although not observed before the mooring was recovered, this inorganic carbon was likely later entrained with surface water, increasing the pCO2 at the surface. It is probable that inorganic carbon exclusion during ice formation will have an increasingly important influence on DIC and pCO2 in the surface of the Arctic Ocean as seasonal ice production and wind‐driven mixing increase with diminishing ice cover.

Description: Research Associate Cory Beatty (University of Montana) prepared the CO2 instruments and helped with the mooring deployments and data processing. Pierce Fix (undergraduate intern, University of Montana) helped with the mass balance modeling. The moorings were designed and deployed by personnel at Woods Hole Oceanographic Institution. Michiyo Yamamoto‐Kawai (University of Tokyo) and Marty Davelaar (Institute of Ocean Sciences; IOS) provided the alkalinity and dissolved inorganic carbon data. We thank the captain, officers, crew, and chief scientists (Bill Williams and Sarah Zimmerman, IOS) of the CCGS Louis S. St. Laurent. The data used in this study are available through the U.S. National Science Foundation (NSF) Arctic Data Center (https://arcticdata.io). This research was made possible by grants from the NSF Arctic Observing Network program (ARC‐1107346, PLR‐1302884, PLR‐1504410, and PLR‐1723308).

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Paleoceanography and Paleoclimatology, 34(7), (2019): 1218-1233, doi:10.1029/2018PA003537.

Description: The last deglaciation (~20–10 kyr BP) was characterized by a major shift in Earth's climate state, when the global mean surface temperature rose ~4 °C and the concentration of atmospheric CO2 increased ~80 ppmv. Model simulations suggest that the initial 30 ppmv rise in atmospheric CO2 may have been driven by reduced efficiency of the biological pump or enhanced upwelling of carbon‐rich waters from the abyssal ocean. Here we evaluate these hypotheses using benthic foraminiferal B/Ca (a proxy for deep water [CO32−]) from a core collected at 1,100‐m water depth in the Southwest Atlantic. Our results imply that [CO32−] increased by 22 ± 2 μmol/kg early in Heinrich Stadial 1, or a decrease in ΣCO2 of approximately 40 μmol/kg, assuming there were no significant changes in alkalinity. Our data imply that remineralized phosphate declined by approximately 0.3 μmol/kg during Heinrich Stadial 1, equivalent to 40% of the modern remineralized signal at this location. Because tracer inversion results indicate remineralized phosphate at the core site reflects the integrated effect of export production in the sub‐Antarctic, our results imply that biological productivity in the Atlantic sector of the Southern Ocean was reduced early in the deglaciation, contributing to the initial rise in atmospheric CO2.

Description: We would like to thank Bärbel Hönisch at Lamont‐Doherty Earth Observatory of Columbia University for help with methods development and Sarah McCart for technical assistance with ICP‐MS analyses. We would also like to give special thanks to Anna lisa Mudahy, who was responsible for picking a substantial portion of the benthic foraminifera used in this study. We are grateful to the WHOI core lab for sample collection and archiving. This work was supported by NSF grant OCE‐1702231 to D. L.

Description: 2020-01-24

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 46(12), (2019): 6745-6754, doi:10.1029/2019GL082867.

Description: Although photochemical oxidation is an environmental process that drives organic carbon (OC) cycling, its quantitative detection remains analytically challenging. Here, we use samples from the Deepwater Horizon oil spill to test the hypothesis that the stable oxygen isotope composition of oil (δ18OOil) is a sensitive marker for photochemical oxidation. In less than one‐week, δ18OOil increased from −0.6 to 7.2‰, a shift representing ~25% of the δ18OOC dynamic range observed in nature. By accounting for different oxygen sources (H2O or O2) and kinetic isotopic fractionation of photochemically incorporated O2, which was −9‰ for a wide range of OC sources, a mass balance was established for the surface oil's elemental oxygen content and δ18O. This δ18O‐based approach provides novel insights into the sources and pathways of hydrocarbon photo‐oxidation, thereby improving our understanding of the fate and transport of petroleum hydrocarbons in sunlit waters, and our capacity to respond effectively to future spills.

Description: We thank Robert Ricker and Greg Baker (NOAA) for helping secure the oil residues, James Payne (Payne Environmental Consultants, Inc.) for collecting many of the surface oil residues, Joy Matthews (UC Davis) for exceptional assistance in preparing and analyzing the oil residues for oxygen content and isotopes, Hank Levi and Art Gatenby at CSC Scientific Company for assistance with the water content measurements, Robyn Comny (US EPA) for providing the Alaska North Slope oil, and Rose Cory (UMich) for discussions about our findings. Special thanks to John Hayes who provided constructive feedback on a preliminary version of this dataset prior to his passing in February of 2017. We thank Alex Sessions (CalTech) for his constructive feedback during the review process. This work was supported, in part, by National Science Foundation grants RAPID OCE‐1043976 (CMR), OCE‐1333148 (CMR), OCE‐1333026 (CMS), OCE‐1333162 (DLV), OCE‐1841092 (CPW), NASA NESSF NNX15AR62H (KMS), the Gulf of Mexico Research Initiative grants ‐ 015, SA 16‐30, and DEEP‐C consortium, a fellowship through the Hansewissenschaftskolleg (Institute for Advanced Studies) to SDW, and assistant scientist salary support from the Frank and Lisina Hoch Endowed Fund (CPW).

Description: 2019-11-30

Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Selden, C. R., Mulholland, M. R., Bernhardt, P. W., Widner, B., Macias-Tapia, A., Ji, Q., & Jayakumar, A. Dinitrogen fixation across physico-chemical gradients of the Eastern Tropical North Pacific oxygen deficient zone. Global Biogeochemical Cycles, 33, (2019): 1187-1202, doi:10.1029/2019GB006242.

Description: The Eastern Tropical North Pacific Ocean hosts one of the world's largest oceanic oxygen deficient zones (ODZs). Hot spots for reactive nitrogen (Nr) removal processes, ODZs generate conditions proposed to promote Nr inputs via dinitrogen (N2) fixation. In this study, we quantified N2 fixation rates by 15N tracer bioassay across oxygen, nutrient, and light gradients within and adjacent to the ODZ. Within subeuphotic oxygen‐deplete waters, N2 fixation was largely undetectable; however, addition of dissolved organic carbon stimulated N2 fixation in suboxic (〈20 μmol/kg O2) waters, suggesting that diazotroph communities are likely energy limited or carbon limited and able to fix N2 despite high ambient concentrations of dissolved inorganic nitrogen. Elevated rates (〉9 nmol N·L−1·day−1) were also observed in suboxic waters near volcanic islands where N2 fixation was quantifiable to 3,000 m. Within the overlying euphotic waters, N2 fixation rates were highest near the continent, exceeding 500 μmol N·m−2·day−1 at one third of inshore stations. These findings support the expansion of the known range of diazotrophs to deep, cold, and dissolved inorganic nitrogen‐replete waters. Additionally, this work bolsters calls for the reconsideration of ocean margins as important sources of Nr. Despite high rates at some inshore stations, regional N2 fixation appears insufficient to compensate for Nr loss locally as observed previously in the Eastern Tropical South Pacific ODZ.

Description: We gratefully acknowledge the efforts of the captain and crew of the NOAA vessel Ronald H. Brown and the scientists who participated in the collection and analysis of the data presented here, particularly Shannon Cofield, Wei Yan, Nicole Travis, and Matt Forbes. We thank the Monterey Bay Aquatic Research Institute for the use of their pump profiling system and Margeurite Blum for her expertise in its use. Finally, we thank Bess Ward for the use of her facilities at Princeton University. This work was supported by the National Science Foundation Division of Ocean Sciences (NSF‐OCE) Grant OCE‐1356056 to M. R. M. and A. J. Data will be made available at the website (https://www.bco‐dmo.org/project/472492). The authors declare no conflicts of interest.

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Solid Earth 124 (2019): 9980– 9998, doi:10.1029/2019JB017584.

Description: Macrostructures preserved in deformed rocks are essential for the understanding of their evolution, especially when the deformation is weak and hard to discriminate in regional scale or purely through geophysical data. In order to resolve the inconsistency between NS trending fracture zones and NE oriented spreading fabrics of the South China Sea during the latest spreading stage, we analyzed macrostructures identifiable from the basalt and consolidated sediment samples of the Integrated Ocean Drilling Program (IODP) Sites U1431 and U1433. These two sites are close to the East and Southwest relict spreading ridges and provide critical information on the latest spreading stages. The structures in the basalt of both sites suggest two dominant orientations of NS and NE. At U1431, sediments show mainly WNW trending slickensides, different from that of basalt. At U1433, no structures were found in postspreading sediment. Thus, NE and NS trending structures in basalt are most possibly formed by seafloor spreading. Crosscutting relationship suggests that NE trending structures formed first, followed by NS and finally WNW trending structures. These observations are consistent with geophysical features. Magnetic anomalies and ocean bottom seismometer velocity suggest that the latest relict ridge of the East Subbasin coincides with the EW trending seamount chain. Located between the relict ridges of East and Southwest Subbasins, NS trending Zhongnan‐Liyue Fracture Zone had acted as the latest transform fault. Based on the above evidences, we proposed that the South China Sea may have experienced a short period of NS oriented spreading after earlier SE spreading. These results resolve the previous inconsistencies.

Description: We appreciate Anne Replumaz and other anonymous reviewers for the constructive suggestions, which improve this paper to a great extent. This research was supported by Guangdong NSF research team project (2017A030312002), K. C. Wong Education Foundation (GJTD‐2018‐13), the IODP‐China Foundation, the NSFC Projects (91628301, 41376027, 41576070, 41576068, 41430962, 41674069, 91528302, and 20153410), U.S. National Science Foundation through Grant EAR‐1250444, the Guangdong Province Foundation (41576068), and the Joint Foundation of the Natural Science Foundation of China (NSFC) and Guangdong Province (U1301233). Fucheng Li is thanked for helping with the earthquake epicenter figure for the study area. All the sample photos can be accessed via web address (http://www.iodp.tamu.edu). The archive halves of samples are kept in the Kochi repository. The paleomag data will be published by Xixi Zhao separately. All the other geophysical data have been published; for example, the multichannel seismic could be referenced to Li et al. (2015a), and the gravity data and magnetic anomaly data are from Sandwell et al. (2014) and Ishihara and Kisimoto (1996).

Description: 2020-02-29

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geochemistry Geophysics Geosystems 20(7), (2019): 3347-3374, doi:10.1029/2019GC008374.

Description: Subduction is a key component of Earth's long‐term sulfur cycle; however, the mechanisms that drive sulfur from subducting slabs remain elusive. Isotopes are a sensitive indicator of the speciation of sulfur in fluids, sulfide dissolution‐precipitation reactions, and inferring fluid sources. To investigate these processes, we report δ34S values determined by secondary ion mass spectroscopy in sulfides from a global suite of exhumed high‐pressure rocks. Sulfides are classified into two petrogenetic groups: (1) metamorphic, which represent closed‐system (re)crystallization from protolith‐inherited sulfur, and (2) metasomatic, which formed during open system processes, such as an influx of oxidized sulfur. The δ34S values for metamorphic sulfides tend to reflect their precursor compositions: −4.3 ‰ to +13.5 ‰ for metabasic rocks, and −32.4 ‰ to −11.0 ‰ for metasediments. Metasomatic sulfides exhibit a range of δ34S from −21.7 ‰ to +13.9 ‰. We suggest that sluggish sulfur self‐diffusion prevents isotopic fractionation during sulfide breakdown and that slab fluids inherit the isotopic composition of their source. We estimate a composition of −11 ‰ to +8 ‰ for slab fluids, a significantly smaller range than observed for metasomatic sulfides. Large fractionations during metasomatic sulfide precipitation from sulfate‐bearing fluids, and an evolving fluid composition during reactive transport may account for the entire ~36 ‰ range of metasomatic sulfide compositions. Thus, we suggest that sulfates are likely the dominant sulfur species in slab‐derived fluids.

Description: All isotopic data and analysis locations are detailed in the supporting information accompanying this article. The authors would like to thank B. Monteleone and M. Yates for assistance with SIMS and EPMA analyses, respectively. J. Selverstone is thanked for providing samples and D. Whitney for providing additional field context. The authors would also like to thank J. Alt, C. LaFlamme, and an anonymous reviewer for their thoughtful and thorough reviews, as well as careful editorial handling by J. Blichert‐Toft. This project was funded by National Science Foundation Grant EAR 1725301 awarded to A. M. C. and a Geological Society of America grant to J. B. W.

Description: 2019-12-14

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 46(14), (2019): 8572-8581, doi: 10.1029/2019GL083039.

Description: As Arctic temperatures rise at twice the global rate, sea ice is diminishing more quickly than models can predict. Processes that dictate Arctic cloud formation and impacts on the atmospheric energy budget are poorly understood, yet crucial for evaluating the rapidly changing Arctic. In parallel, warmer temperatures afford conditions favorable for productivity of microorganisms that can effectively serve as ice nucleating particles (INPs). Yet the sources of marine biologically derived INPs remain largely unknown due to limited observations. Here we show, for the first time, how biologically derived INPs were likely transported hundreds of kilometers from deep Bering Strait waters and upwelled to the Arctic Ocean surface to become airborne, a process dependent upon a summertime phytoplankton bloom, bacterial respiration, ocean dynamics, and wind‐driven mixing. Given projected enhancement in marine productivity, combined oceanic and atmospheric transport mechanisms may play a crucial role in provision of INPs from blooms to the Arctic atmosphere.

Description: We sincerely thank the U.S. Coast Guard and crew of the Healy for assistance with equipment installation and guidance, operation of the underway and CTD systems, and general operation of the vessel during transit and at targeted sampling stations. We would also like to thank Allan Bertram, Meng Si, Victoria Irish, and Benjamin Murray for providing INP data from their previous studies. J. M. C., R. P., P. L., L. T., and E. B. were funded by the National Oceanic and Atmospheric Administration (NOAA)’s Arctic Research Program. J. C. was supported by the NOAA Experiential Research & Training Opportunities (NERTO) program. T. A. and N. C. were supported through the NOAA Earnest F. Hollings Scholarship program. A. P. was funded by the National Science Foundation under Grant PLR‐1303617. Russel C. Schnell and Michael Spall are acknowledged for insightful discussions during data analysis and interpretation. There are no financial conflicts of interest for any author. INP data are available in the supporting information, while remaining DBO‐NCIS data presented in the manuscript are available online (at https://www2.whoi.edu/site/dboncis/).

Description: 2020-01-15

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(8), (2019): 5723-5746, doi:10.1029/2018JC014453.

Description: Estimates of the kinetic energy transfer from the wind to the ocean are often limited by the spatial and temporal resolution of surface currents and surface winds. Here we examine the wind work in a pair of global, very high‐resolution (1/48° and 1/24°) MIT general circulation model simulations in Latitude‐Longitude‐polar Cap (LLC) configuration that provide hourly output at spatial resolutions of a few kilometers and include tidal forcing. A cospectrum analysis of wind stress and ocean surface currents shows positive contribution at large scales (〉300 km) and near‐inertial frequency and negative contribution from mesoscales, tidal frequencies, and internal gravity waves. Larger surface kinetic energy fluxes are in the Kuroshio in winter at large scales (40 mW/m2) and mesoscales (−30 mW/m2). The Kerguelen region is dominated by large scale (∼20 mW/m2), followed by inertial oscillations in summer (13 mW/m2) and mesoscale in winter (−12 mW/m2). Kinetic energy fluxes from internal gravity waves (−0.1 to −9.9 mW/m2) are generally stronger in summer. Surface kinetic energy fluxes in the LLC simulations are 4.71 TW, which is 25–85% higher than previous global estimates from coarser (1/6–1/10°) general ocean circulation models; this is likely due to improved representation of wind variability (6‐hourly, 0.14°, operational European Center for Medium‐Range Weather Forecasts). However, the low wind power input to the near‐inertial frequency band obtained with LLC (0.16 TW) compared to global slab models suggests that wind variability on time scales less than 6 hr and spatial scales less than 15 km are critical to better representing the wind power input in ocean circulation models.

Description: We thank three anonymous reviewers for their helpful comments that led to an improved manuscript. We are grateful to Jörn Callies and Laurie Padman for fruitful discussions. This work is funded by the National Aeronautics and Space Administration (NASA) through the project “Towards improved estimates of upper ocean energetics: Science motivation for the simultaneous measurement of ocean surface vector winds and currents” (Grant NNX15AG42G) and through NASA Grant NNX14AM71G and NNX16AH76G. Model output from global 1/48° and 1/24° ECCO2 MITgcm simulations is freely available to the community. For access of the full solutions, we recommend that users apply for an HEC account at NASA Ames. Data are provided online (∼dmenemen/llc/). Users without a NASA Ames account may explore what is available online (https://data.nas.nasa.gov/ecco/). This work was, in part, performed at the Jet Propulsion Laboratory, California Institute of Technology, under contract with the National Aeronautics and Space Administration. Color maps used in this contribution are from Thyng et al. (2016). To Teresa and Francesc, for their patience.

Description: Author Posting. © American Geophysical Union, 2019. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research-Oceans 124(7), (2019): 4605-4617, doi: 10.1029/2018JC014928.

Description: We report the significant impact of near‐inertial waves (NIWs) on vertical mixing and air‐sea carbon dioxide (CO2) fluxes in the Southern Ocean using a biogeochemical model coupled to an eddy‐rich ocean circulation model. The effects of high‐frequency processes are quantified by comparing the fully coupled solution (ONLINE) to two offline simulations based on 5‐day‐averaged output of the ONLINE simulation: one that uses vertical mixing archived from the ONLINE model (CTRL) and another in which vertical mixing is recomputed from the 5‐day average hydrodynamic fields (5dAVG). In this latter simulation, processes with temporal variabilities of a few days including NIWs are excluded in the biogeochemical simulation. Suppression of these processes reduces vertical shear and vertical mixing in the upper ocean, leading to decreased supply of carbon‐rich water from below, less CO2 outgassing in austral winter, and more uptake in summer. The net change amounts up to one third of the seasonal variability in Southern Ocean CO2 flux. Our results clearly demonstrate the importance of resolving high‐frequency processes such as NIWs to better estimate the carbon cycle in numerical model simulations.

Description: The MITgcm can be obtained from http://mitgcm.org website. Resources supporting this work were provided by the NASA High‐End Computing (HEC) Program through the NASA Advanced Supercomputing (NAS) Division at Ames Research Center with the Award SMD‐15‐5752. H. S., J. M., and D. J. M. were supported by the NSF MOBY project (OCE‐1048926 and OCE‐1048897). H. S. acknowledges the support by National Research Foundation of Korea (NRF) grant (NRF‐2019R1C1C1003663) and Yonsei University Research Fund of 2018‐22‐0053. D. J. M. also gratefully acknowledges NASA support.

Description: 2019-12-17

Description: The Beagle Channel is a remote subantarctic environment where mussel aquaculture initiatives have existed since the early 1990s. Here we analyze phytoplankton biomass and composition, and the occurrence of harmful microalgae species and their toxins at three sites during the period 2015–2016. The occurrence of potentially harmful algae was observed throughout the study period, including toxigenic dinoflagellates such as Alexandrium catenella (Group I of the A. tamarense complex), A. ostenfeldii, Dinophysis acuminata, Gonyaulax spinifera, Azadinium sp., and the diatoms Pseudo-nitzschia australis and P. fraudulenta. Toxic dinoflagellates were detected in low densities whereas a Pseudo-nitzschia bloom was observed in late February. Isolates of A. catenella and P. delicatissima sensu stricto were phylogenetically characterized. The toxin profile of A. catenella was dominated by GTX4, while P. delicatissima sensu stricto showed no production of the neurotoxin domoic acid in culture conditions. The results provide base-line information for the management of harmful algal blooms in this little explored subantarctic area.

Description: Bacteria are surrounded by a protective exoskeleton, peptidoglycan (PG), a cross-linked mesh-like macromolecule consisting of glycan strands interlinked by short peptides. Because PG completely encases the cytoplasmic membrane, cleavage of peptide cross-links is a prerequisite to make space for incorporation of nascent glycan strands for its successful expansion during cell growth. In most bacteria, the peptides consist of l-alanine, d-glutamate, meso-diaminopimelic acid (mDAP) and d-alanine (d-Ala) with cross-links occurring either between d-Ala and mDAP or two mDAP residues. In Escherichia coli, the d-Ala−mDAP cross-links whose cleavage by specialized endopeptidases is crucial for expansion of PG predominate. However, a small proportion of mDAP−mDAP cross-links also exist, yet their role in the context of PG expansion or the hydrolase(s) capable of catalyzing their cleavage is not known. Here, we identified an ORF of unknown function, YcbK (renamed MepK), as an mDAP−mDAP cross-link cleaving endopeptidase working in conjunction with other elongation-specific endopeptidases to make space for efficient incorporation of nascent PG strands into the sacculus. E. coli mutants lacking mepK and another d-Ala−mDAP–specific endopeptidase (mepS) were synthetic sick, and the defects were abrogated by lack of l,d-transpeptidases, enzymes catalyzing the formation of mDAP cross-links. Purified MepK was able to cleave the mDAP cross-links of soluble muropeptides and of intact PG sacculi. Overall, this study describes a PG hydrolytic enzyme with a hitherto unknown substrate specificity that contributes to expansion of the PG sacculus, emphasizing the fundamental importance of cross-link cleavage in bacterial peptidoglycan synthesis.

Description: As monofacial, single-junction solar cells approach their fundamental limits, there has been significant interest in tandem solar cells in the presence of concentrated sunlight or tandem bifacial solar cells with back-reflected albedo. The bandgap sequence and thermodynamic efficiency limits of these complex cell configurations require sophisticated numerical calculation. Therefore, the analyses of specialized cases are scattered throughout the literature. In this paper, we show that a powerful graphical approach called the normalized “Shockley–Queisser (S-Q) triangle” (i.e., imp=1−vmp) is sufficient to calculate the bandgap sequence and efficiency limits of arbitrarily complex photovoltaic (PV) topologies. The results are validated against a wide variety of specialized cases reported in the literature and are accurate within a few percent. We anticipate that the widespread use of the S-Q triangle will illuminate the deeper physical principles and design trade-offs involved in the design of bifacial tandem solar cells under arbitrary concentration and series resistance.

Description: Previous studies have shown that insulin and IGF-1 signaling in the brain, especially the hypothalamus, is important for regulation of systemic metabolism. Here, we develop mice in which we have specifically inactivated both insulin receptors (IRs) and IGF-1 receptors (IGF1Rs) in the hippocampus (Hippo-DKO) or central amygdala (CeA-DKO) by stereotaxic delivery of AAV-Cre into IRlox/lox/IGF1Rlox/loxmice. Consequently, both Hippo-DKO and CeA-DKO mice have decreased levels of the GluA1 subunit of glutamate AMPA receptor and display increased anxiety-like behavior, impaired cognition, and metabolic abnormalities, including glucose intolerance. Hippo-DKO mice also display abnormal spatial learning and memory whereas CeA-DKO mice have impaired cold-induced thermogenesis. Thus, insulin/IGF-1 signaling has common roles in the hippocampus and central amygdala, affecting synaptic function, systemic glucose homeostasis, behavior, and cognition. In addition, in the hippocampus, insulin/IGF-1 signaling is important for spatial learning and memory whereas insulin/IGF-1 signaling in the central amygdala controls thermogenesis via regulation of neural circuits innervating interscapular brown adipose tissue.

Description: The sunflower family, Asteraceae, comprises 10% of all flowering plant species and displays an incredible diversity of form. Asteraceae are clearly monophyletic, yet resolving phylogenetic relationships within the family has proven difficult, hindering our ability to understand its origin and diversification. Recent molecular clock dating has suggested a Cretaceous origin, but the lack of deep sampling of many genes and representative taxa from across the family has impeded the resolution of migration routes and diversifications that led to its global distribution and tremendous diversity. Here we use genomic data from 256 terminals to estimate evolutionary relationships, timing of diversification(s), and biogeographic patterns. Our study places the origin of Asteraceae at ∼83 MYA in the late Cretaceous and reveals that the family underwent a series of explosive radiations during the Eocene which were accompanied by accelerations in diversification rates. The lineages that gave rise to nearly 95% of extant species originated and began diversifying during the middle Eocene, coincident with the ensuing marked cooling during this period. Phylogenetic and biogeographic analyses support a South American origin of the family with subsequent dispersals into North America and then to Asia and Africa, later followed by multiple worldwide dispersals in many directions. The rapid mid-Eocene diversification is aligned with the biogeographic range shift to Africa where many of the modern-day tribes appear to have originated. Our robust phylogeny provides a framework for future studies aimed at understanding the role of the macroevolutionary patterns and processes that generated the enormous species diversity of Asteraceae.