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  • Articles  (117)
  • Naturalis Biodiversity Center  (112)
  • Springer Science + Business Media
  • Wiley-Blackwell
  • 2020-2024  (117)
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  • 1
    Publication Date: 2024-01-31
    Description: The response of permafrost to submergence can vary between ice-rich late Pleistocene deposits and the thermokarst basins that thawed out during the Holocene. We hypothesize that inundated Alases offshore thaw faster than submerged Yedoma. To test this hypothesis, we estimated depths to the top of ice-bearing permafrost offshore of the Bykovsky Peninsula in northeast Siberia using electrical resistivity surveys. The surveys traversed submerged lagoon deposits, drained and refrozen Alas deposits, and undisturbed Yedoma from the coastline to 373 m offshore. While the permafrost degradation rates of the submerged Yedoma were in the range of similar sites, the submerged Alas permafrost degradation rates were up to 170% faster. Given the abundance of thermokarst basins and lakes along parts of the Arctic coastline, its effect on subsea permafrost degradation must be similarly prevalent. Remote sensing analyses suggest that 54% of lagoons wider than 500 m originated in thermokarst basins.
    Repository Name: EPIC Alfred Wegener Institut
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  • 2
    Publication Date: 2024-01-31
    Description: Permafrost thaw leads to thermokarst lake formation and talik growth tens of meters deep, enabling microbial decomposition of formerly frozen organic matter (OM). We analyzed two 17-m-long thermokarst lake sediment cores taken in Central Yakutia, Russia. One core was from an Alas lake in a Holocene thermokarst basin that underwent multiple lake generations, and the second core from a young Yedoma upland lake (formed ca. 70 years ago) whose sediments have thawed for the first time since deposition. This comparison provides a glance into OM fate in thawing Yedoma deposits. We analyzed total organic carbon (TOC) and dissolved organic carbon (DOC) content, n-alkanes concentrations, and bacterial and archaeal membrane markers. Furthermore, we conducted one-year-long incubations (4 °C, dark) and measured anaerobic carbon dioxide (CO2) and methane (CH4) production. The sediments from both cores contained little TOC (0.7±0.4 wt%), but DOC values were relatively high, with highest values in the frozen Yedoma lake sediments (1620 mg L-1). Cumulative GHG production after one year was highest in the Yedoma lake sediments (226±212 μg CO2-C gdw-1, 28±36 μg CH4-C gdw-1) and 3 and 1.5 times lower in the Alas lake sediments, respectively (75±76 μg CO2-C gdw-1, 19±29 μg CH4-C gdw-1). The highest CO2 production in the frozen Yedoma lake sediments likely results from decomposition of readily bioavailable OM, while highest CH4 production in the non-frozen top sediments of this core suggests that methanogenic communities established upon thaw. The lower GHG production in the non-frozen Alas lake sediments resulted from advanced OM decomposition during Holocene talik development. Furthermore, we found that drivers of CO2 and CH4 production differ following thaw. Our results suggest that GHG production from TOC-poor mineral deposits, which are widespread throughout the Arctic, can be substantial. Therefore, our novel data are relevant for vast ice-rich permafrost deposits vulnerable to thermokarst formation.
    Repository Name: EPIC Alfred Wegener Institut
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  • 3
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    Wiley-Blackwell
    In:  EPIC3Permafrost and Periglacial Processes, Wiley-Blackwell, 32(1), pp. 59-75, ISSN: 1045-6740
    Publication Date: 2024-01-31
    Description: Thermal erosion is a major mechanism of permafrost degradation, resulting in characteristic landforms. We inventory thermo-erosional valleys in ice-rich coastal lowlands adjacent to the Siberian Laptev Sea based on remote sensing, Geographic Information System (GIS), and field investigations for a first regional assessment of their spatial distribution and characteristics. Three study areas with similar geological (Yedoma Ice Complex) but diverse geomorphological conditions vary in valley areal extent, incision depth, and branching geometry. The most extensive valley networks are incised deeply (up to 35 m) into the broad inclined lowland around Mamontov Klyk. The flat, low-lying plain forming the Buor Khaya Peninsula is more degraded by thermokarst and characterized by long valleys of lower depth with short tributaries. Small, isolated Yedoma Ice Complex remnants in the Lena River Delta predominantly exhibit shorter but deep valleys. Based on these hydrographical network and topography assessments, we discuss geomorphological and hydrological connections to erosion processes. Relative catchment size along with regional slope interact with other Holocene relief-forming processes such as thermokarst and neotectonics. Our findings suggest that thermo-erosional valleys are prominent, hitherto overlooked permafrost degradation landforms that add to impacts on biogeochemical cycling, sediment transport, and hydrology in the degrading Siberian Yedoma Ice Complex.
    Repository Name: EPIC Alfred Wegener Institut
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  • 4
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 68 no. 1, pp. 63-65
    Publication Date: 2024-03-24
    Description: A new subspecies of the African species Spermacoce bequaertii is described and illustrated. This new subspecies (subsp. brevituba) is restricted to the Kasai district in the Democratic Republic of Congo, and differs from the typical subspecies in having smaller mature flowers with a glabrous corolla tube inside.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Africa ; Rubiaceae ; Spermacoce bequaertii ; Spermacoceae ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 5
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 67 no. 2, pp. 129-131
    Publication Date: 2024-03-24
    Description: A new species of Freycinetia Gaudich. (Pandanaceae; Freycinetoideae) with conspicuous ellipsoid leaves and spiny auricles from the island of Halmahera in the Moluccan Archipelago is here newly described as F. halmaherensis A.P.Keim, W.Sujarwo & Sahroni. A full description of the new species and a key to the species of Freycinetia in the Moluccas are provided.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Freycinetia ; Freycinetoideae ; Halmahera ; Moluccas ; Pandanaceae
    Repository Name: National Museum of Natural History, Netherlands
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  • 6
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 67 no. 2, pp. 123-128
    Publication Date: 2024-03-24
    Description: Amorphophallus wasa Naive, K.Z.Hein & Hett., is described and illustrated as a species new to science from the Sagaing Region, Myanmar. It is morphologically similar to A. saraburiensis Gagnep., but can be easily distinguished by its unilocular ovaries and lack of staminodes between pistillate and staminate zones. A detailed description, colour plates, phenology, distribution map, provisional conservation status and a key to the Amorphophallus species from Myanmar are provided. In addition, A. elatus Hook.f. is reported as a newly recorded species for Myanmar, and the name A. corrugatus N.E.Br. is newly synonymized under A. kachinensis Engl. & Gehrm.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Aroideae ; biodiversity ; Burma ; plant taxonomy ; Southeast Asian Flora
    Repository Name: National Museum of Natural History, Netherlands
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  • 7
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 67 no. 2, pp. 132-138
    Publication Date: 2024-03-24
    Description: Three new species of Breynia are described for Malesia, B. longistyla from Borneo, B. papillosa from New Guinea, and B. suborbicularis from Sulawesi. They are primarily distinguished by characters of indumentum, leaves, and styles. Ten lectotypes and one neotype are designated, and one new synonym is proposed.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Breynia ; lectotype ; Malesia ; neotype ; Phyllanthaceae
    Repository Name: National Museum of Natural History, Netherlands
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  • 8
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 49, pp. 99-135
    Publication Date: 2024-03-24
    Description: Circinotrichum, Gyrothrix and Vermiculariopsiella represent a complex of dematiaceous, setose, saprobic hyphomycetes that are commonly collected on plant litters in tropical, subtropical to temperate climates. Multi-locus analysis (ITS, LSU, rpb2) and morphological studies revealed that Gyrothrix and Circinotrichum are polyphyletic and species belong to 10 genera grouping in three different clades within Xylariales, named Coniocessiaceae (Circinotrichum and Pirozynskiomyces gen. nov.), Microdochiaceae (Selenodriella and the resurrected genus Peglionia) and the new family Gyrothricaceae (Gyrothrix, Xenoanthostomella, Neogyrothrix gen. nov., Pseudocircinotrichum gen. nov., and Pseudoceratocladium gen. nov.). Vermiculariopsiella (Vermiculariopsiellales, Vermiculariopsiellaceae) is emended for species with setose sporodochia with simple setae (V. dichapetali, V. eucalypticola, V. immersa, V. pini, V. spiralis, V. australiensis sp. nov.) while Vermiculariopsis is resurrected and includes setose fungi with branched setae (Vs. dunni, Vs. eucalypti, Vs. eucalyptigena, Vs. lauracearum, Vs. microsperma, Vs. pediculata and Vs. castanedae sp. nov.).
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Microdochiaceae ; new taxa ; Selenodriella ; Sordariomycetes ; Vermiculariopsiellales ; Xylariales
    Repository Name: National Museum of Natural History, Netherlands
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  • 9
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 49, pp. 58-98
    Publication Date: 2024-03-24
    Description: Based on phylogenetic analyses of a multi-gene matrix of nuITS-LSU rDNA, RPB2 and TUB2 sequences and morphology, xylariaceous species with uni- to pauciperitheciate stromata and ascospores having a spirally coiling (helicoid) germ slit are revised and reclassified, including detailed descriptions and illustrations. The genus Helicogermslita is redefined and restricted to seven species with massive, erumpent, clypeus-like carbonaceous stromata, and Rosellinia somala is combined in Helicogermslita. Within the core Xylariaceae, the poorly known Leptomassaria simplex is shown to be closely related to Anthostoma insidiosum, for which the new genus Oligostoma is established, and Anthostoma rhenanum is demonstrated to be synonymous with O. insidiosum. The new genus Albicollum, characterised by immersed ascomata and a collar of white pseudostromatic tissues surrounding the ostioles, is established for Amphisphaeria canicollis, Anthostoma chionostomum, Sordaria (= Helicogermslita) fleischhakii and Anthostoma vincensii. Anthostoma ostropoides is synomymised with Albicollum canicolle, and Al. berberidicola, Al. longisporum and Al. novomexicanum are described as new species. Rosellinia (= Helicogermslita) gaudefroyi is transferred to the new genus Spiririma. Anthostoma amoenum and Euepixylon udum, both with a poroid germ locus, are shown to be only distantly related, and An. amoenum is reclassified within the asexual genus Digitodochium. Based on phylogeny, the genus Euepixylon is treated as a synonym of Nemania. A new species, Nemania ethancrensonii, which is closely related to the two formerly accepted Euepixylon species (E. sphaeriostomum, E. udum) but strongly deviates from the morphological concept of Euepixylon and Nemania, is described from the eastern USA. The genera Anthostomelloides, Clypeosphaeria, Digitodochium, Emarcaea, Induratia, Linosporopsis, Magnostiolata, Occultitheca and Spiririma are revealed to form a morphologically heterogeneous lineage in a basal position of Xylariaceae. Anthostoma vincensii, Quaternaria simplex and Rosellinia gaudefroyi are lectotypified, and Amphisphaeria canicollis, Anthostoma amoenum, An. rhenanum, An. vincensii, Quaternaria simplex, Rosellinia gaudefroyi and Valsa insidiosa are epitypified. Keys to uni- to pauciperitheciate xylariaceous genera with sigmoid to helicoid germ slits and to species of Albicollum are provided.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Anthostoma ; Ascomycota ; Helicogermslita ; molecular phylogeny ; new taxa ; systematics ; Xylariales
    Repository Name: National Museum of Natural History, Netherlands
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  • 10
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 67 no. 2, pp. 109-112
    Publication Date: 2024-03-25
    Description: Echinosepala truncata is described as new to science and illustrated from the holotype. It is compared with E. tomentosa, from which it differs by the sparsely lanate ovary, the narrowly obovate, apically rounded synsepal, the spathulate, apically and basally rounded petals, and the rectangular, apically truncate lip. The phylogenetic relationships of the new species could be hypothesized based on a shared set of morphological characters and geographic distribution.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; flora of Costa Rica ; new species ; Península de Osa ; phylogeny ; Pleurothallidinae
    Repository Name: National Museum of Natural History, Netherlands
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  • 11
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 67 no. 2, pp. xv-xix
    Publication Date: 2024-03-25
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Hans Nooteboom ; Obituary
    Repository Name: National Museum of Natural History, Netherlands
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  • 12
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 67 no. 2, pp. 139-155
    Publication Date: 2024-03-25
    Description: In the present paper we publish eight new species from New Guinea, H. domaensis, H. gauttierensis, H. liddleana, H. lucida, H. paradisea, H. pulleana, H. tarikuensis, and H. unirana, and one subspecies, H. krusenstierniana subsp. laticorolla. Five taxa were first diagnosed based on specimens at the Leiden herbarium, one species is only known from a collection at Edinburgh and Lae herbaria, while three are based on recently collected specimens. Hoya leucantha, originally described from a specimen in bud, has been identified among herbarium specimens and was also recently recollected. It is therefore fully described and illustrated for the first time.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics
    Repository Name: National Museum of Natural History, Netherlands
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  • 13
    Publication Date: 2024-04-02
    Description: Type material and additional collections of 11 taxa of Gautieria described in Europe and North Africa have been studied, namely G. dubia, G. graveolens, G. morchelliformis var. globispora, G. morchelliformis var. magnicellaris, G. morchelliformis var. morchelliformis, G. morchelliformis var. stenospora, G. otthii, G. pseudovestita, G. retirugosa, G. trabutii and G. villosa. At the same time, morphological and genetic studies on recent and herbarium collections from several European countries have been carried out. This enabled clarification of sections within Gautieria and differentiation of 28 taxa, of which 21 are new to science. However, the deeper relationships and nomenclature changes related to the phylogenetic position of the genus Gautieria within Gomphaceae will not be addressed in this study because they would require a more complete molecular analysis together with that of related genera, e.g., Gomphus, Turbinellus, and the four subgenera of Ramaria. In addition, a lectotype for G. villosa var. villosa and reference specimens for G. graveolens and G. morchelliformis var. morchelliformis are selected, and the new combination G. morchelliformis var. dubia is proposed. Detailed descriptions, macro- and microphotographs and distribution maps of all taxa are provided, as well as extensive information on their ecology, chorology and phylogeny. A key is included to facilitate identification of taxa.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Europe ; Gautieria ; ITS-LSU phylogeny ; Mediterranean Region ; Ramaria ; sequestrate fungi ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 14
    Publication Date: 2024-04-02
    Description: Novel species of fungi described in this study include those from various countries as follows: Australia, Aschersonia mackerrasiae on whitefly, Cladosporium corticola on bark of Melaleuca quinquenervia, Penicillium nudgee from soil under Melaleuca quinquenervia, Pseudocercospora blackwoodiae on leaf spot of Persoonia falcata, and Pseudocercospora dalyelliae on leaf spot of Senna alata. Bolivia, Aspicilia lutzoniana on fully submersed siliceous schist in high-mountain streams, and Niesslia parviseta on the lower part and apothecial discs of Erioderma barbellatum onatwig. Brazil, Cyathus bonsai on decaying wood, Geastrum albofibrosum from moist soil with leaf litter, Laetiporus pratigiensis on a trunk of a living unknown hardwood tree species, and Scytalidium synnematicum on dead twigs of unidentified plant. Bulgaria, Amanita abscondita on sandy soil in a plantation of Quercus suber. Canada, Penicillium acericola on dead bark of Acer saccharum, and Penicillium corticola on dead bark of Acer saccharum. China, Colletotrichum qingyuanense on fruit lesion of Capsicum annuum. Denmark, Helminthosphaeria leptospora on corticioid Neohypochnicium cremicolor. Ecuador (Galapagos), Phaeosphaeria scalesiae on Scalesia sp. Finland, Inocybe jacobssonii on calcareouss oils in dry forests and park habitats. France, Cortinarius rufomyrrheus on sandy soil under Pinus pinaster, and Periconia neominutissima on leaves of Poaceae. India, Coprinopsis fragilis on decaying bark of logs, Filoboletus keralensis on unidentified woody substrate, Penicillium sankaranii from soil, Physisporinus tamilnaduensis on the trunk of Azadirachta indica, and Poronia nagaraholensis on elephant dung. Iran, Neosetophoma fic on infected leaves of Ficus elastica. Israel, Cnidariophoma eilatica (incl. Cnidariophoma gen. nov.) from Stylophora pistillata. Italy, Lyophyllum obscurum on acidic soil. Namibia, Aureobasidium faidherbiae on dead leaf of Faidherbia albida, and Aureobasidium welwitschiae on dead leaves of Welwitschia mirabilis. Netherlands, Gaeumannomycella caricigena on dead culms of Carex elongata, Houtenomyces caricicola (incl. Houtenomyces gen. nov.) on culms of Carex disticha, Neodacampia ulmea (incl. Neodacampia gen. nov.) on branch of Ulmus laevis, Niesslia phragmiticola on dead standing culms of Phragmites australis, Pseudopyricularia caricicola on culms of Carex disticha, and Rhodoveronaea nieuwwulvenica on dead bamboo sticks. Norway, Arrhenia similis half-buried and moss-covered pieces of rotting wood in grass-grownpath. Pakistan, Mallocybe ahmadii on soil. Poland, Beskidomyces laricis (incl. Beskidomyces gen. nov.) from resin of Larix decidua ssp. polonica, Lapidomyces epipinicola from sooty mould community on Pinus nigra, and Leptographium granulatum from a gallery of Dendroctonus micans on Picea abies. Portugal, Geoglossum azoricum on mossy areas of laurel forest areas planted with Cryptomeria japonica, and Lunasporangiospora lusitanica from a biofilm covering a bio deteriorated limestone wall. Qatar, Alternaria halotolerans from hypersaline sea water, and Alternaria qatarensis from water sample collected from hypersaline lagoon. South Africa, Alfaria thamnochorti on culm of Thamnochortus fraternus, Knufia aloeicola on Aloe gariepensis, Muriseptatomyces restionacearum (incl.Muriseptatomyces gen. nov.) on culms of Restionaceae, Neocladosporium arctotis on nest of cases of bagworm moths(Lepidoptera, Psychidae) on Arctotis auriculata, Neodevriesia scadoxi on leaves of Scadoxus puniceus, Paraloratospora schoenoplecti on stems of Schoenoplectus lacustris, Tulasnella epidendrea from the roots of Epidendrum × obrienianum, and Xenoidriella cinnamomi (incl. Xenoidriella gen. nov.) on leaf of Cinnamomum camphora. South Korea, Lemonniera fraxinea on decaying leaves of Fraxinus sp. frompond. Spain, Atheniella lauri on the bark of fallen trees of Laurus nobilis, Halocryptovalsa endophytica from surface-sterilised, asymptomatic roots of Salicornia patula, Inocybe amygdaliolens on soil in mixed forest, Inocybe pityusarum on calcareous soil in mixed forest, Inocybe roseobulbipes on acidic soils, Neonectria borealis from roots of Vitis berlandieri × Vitis rupestris, Sympoventuria eucalyptorum on leaves of Eucalyptus sp., and Tuber conchae fromsoil. Sweden, Inocybe bidumensis on calcareous soil. Thailand, Cordyceps sandindaengensis on Lepidoptera pupa, buried in soil, Ophiocordyceps kuchinaraiensis on Coleoptera larva, buried in soil, and Samsoniella winandae on Lepidoptera pupa, buriedinsoil. Taiwan region (China), Neophaeosphaeria livistonae on dead leaf of Livistona rotundifolia. Türkiye, Melanogaster anatolicus on clay loamy soils. UK, Basingstokeomyces allii (incl. Basingstokeomyces gen. nov.) on leaves of Allium schoenoprasum. Ukraine, Xenosphaeropsis corni on recently dead stem of Cornus alba. USA, Nothotrichosporon aquaticum (incl. Nothotrichosporon gen. nov.) from water, and Periconia philadelphiana from swab of coil surface. Morphological and culture characteristics for these new taxa are supported by DNA barcodes.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; ITS nrDNA barcodes ; LSU ; new taxa ; systematics
    Repository Name: National Museum of Natural History, Netherlands
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  • 15
    Publication Date: 2024-03-20
    Description: During surveys in central Florida of the zombie-ant fungus Ophiocordyceps camponoti-floridani, which manipulates the behavior of the carpenter ant Camponotus floridanus, two distinct fungal morphotypes were discovered associated with and purportedly parasitic on O. camponoti-floridani. Based on a combination of unique morphology, ecology and phylogenetic placement, we discovered that these morphotypes comprise two novel lineages of fungi. Here, we propose two new genera, Niveomyces and Torrubiellomyces, each including a single species within the families Cordycipitaceae and Ophiocordycipitaceae, respectively. We generated de novo draft genomes for both new species and performed morphological and multi-loci phylogenetic analyses. The macromorphology and incidence of both new species, Niveomyces coronatus and Torrubiellomyces zombiae, suggest that these fungi are mycoparasites since their growth is observed exclusively on O. camponoti-floridani mycelium, stalks and ascomata, causing evident degradation of their fungal hosts. This work provides a starting point for more studies into fungal interactions between mycopathogens and entomopathogens, which have the potential to contribute towards efforts to battle the global rise of plant and animal mycoses.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Hypocreales ; behaviour manipulation ; entomopathogenic fungi ; genomics ; mycoparasites ; new taxa ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 16
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 67 no. 2, pp. 97-108
    Publication Date: 2024-03-31
    Description: Western Ecuador harbours high plant diversity and endemism. The region of Manabí has known intense deforestation over the last decades, but lowland rain forests persist in a network of small forest fragment patches. Here, we describe two new magnoliid tree species from a small privately owned forest fragment known as La Esperanza reserve, in the El Carmen canton (Manabí): Aniba ecuadorica (Lauraceae) and Guatteria esperanzae (Annonaceae). For both species a detailed morphological description, a preliminary conservation status following IUCN criteria, distribution maps and high quality photographs are provided. This represents the second species of Aniba known to occur in western Ecuador, while there are 14 species of Guatteria documented for Ecuador west of the Andes. Aniba ecuadorica is only known from two localities and has a preliminary IUCN conservation status of Critically Endangered, while Guatteria esperanzae is known from six localities and is suggested to be Endangered. Finally, we provide a quick overview of Guatteria species in western Ecuador with a key to the species in the region. The description of these two new tree species underlines the important need of prospection and conservation of the remnant forests in the Manabí region of western Ecuador. We also stress the importance of privately owned forest fragments for biodiversity conservation.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Aniba ; deforestation ; Guatteria ; IUCN conservation assessments ; Manabí region ; new species
    Repository Name: National Museum of Natural History, Netherlands
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  • 17
    Publication Date: 2024-03-22
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , peerRev
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  • 18
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 67 no. 2, pp. 113-122
    Publication Date: 2024-03-26
    Description: Phanera mekongensis, a new species from Phu Wua Wildlife Sanctuary, Northeastern Thailand, is described and illustrated. The morphological description of the new species is provided and discussed in comparison with closely related species. The molecular data from nuclear and chloroplast markers show that the new taxon is robustly positioned in a well-supported Phanera clade that includes the type species of the genus, P. coccinea.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Bauhinia ; ITS ; molecular phylogeny ; new taxon ; Phanera ; Phu Wua ; trnL-F
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  • 19
    Publication Date: 2024-04-09
    Description: Novel species of fungi described in this study include those from various countries as follows: Algeria, Phaeoacremonium adelophialidum from Vitis vinifera. Antarctica, Comoclathris antarctica from soil. Australia, Coniochaeta salicifolia as endophyte from healthy leaves of Geijera salicifolia, Eremothecium peggii in fruit of Citrus australis, Microdochium ratticaudae from stem of Sporobolus natalensis, Neocelosporium corymbiae on stems of Corymbia variegata, Phytophthora kelmanii from rhizosphere soil of Ptilotus pyramidatus, Pseudosydowia backhousiae on living leaves of Backhousia citriodora, Pseudosydowia indooroopillyensis, Pseudosydowia louisecottisiae and Pseudosydowia queenslandica on living leaves of Eucalyptus sp. Brazil, Absidia montepascoalis from soil. Chile, Ilyonectria zarorii from soil under Maytenus boaria. Costa Rica, Colletotrichum filicis from an unidentified fern. Croatia, Mollisia endogranulata on deteriorated hardwood. Czech Republic, Arcopilus navicularis from tea bag with fruit tea, Neosetophoma buxi as endophyte from Buxus sempervirens, Xerochrysium bohemicum on surface of biscuits with chocolate glaze and filled with jam. France, Entoloma cyaneobasale on basic to calcareous soil, Fusarium aconidiale from Triticum aestivum, Fusarium juglandicola from buds of Juglans regia. Germany, Tetraploa endophytica as endophyte from Microthlaspi perfoliatum roots. India, Castanediella ambae on leaves of Mangifera indica, Lactifluus kanadii on soil under Castanopsis sp., Penicillium uttarakhandense from soil. Italy, Penicillium ferraniaense from compost. Namibia, Bezerromyces gobabebensis on leaves of unidentified succulent, Cladosporium stipagrostidicola on leaves of Stipagrostis sp., Cymostachys euphorbiae on leaves of Euphorbia sp., Deniquelata hypolithi from hypolith under a rock, Hysterobrevium walvisbayicola on leaves of unidentified tree, Knufia hypolithi and Knufia walvisbayicola from hypolith under a rock, Lapidomyces stipagrostidicola on leaves of Stipagrostis sp., Nothophaeotheca mirabibensis (incl. Nothophaeotheca gen. nov.) on persistent inflorescence remains of Blepharis obmitrata, Paramyrothecium salvadorae on twigs of Salvadora persica, Preussia procaviicola on dung of Procavia sp., Sordaria equicola on zebra dung, Volutella salvadorae on stems of Salvadora persica. Netherlands, Entoloma ammophilum on sandy soil, Entoloma pseudocruentatum on nutrient poor (acid) soil, Entoloma pudens on plant debris, amongst grasses. New Zealand, Amorocoelophoma neoregeliae from leaf spots of Neoregelia sp., Aquilomyces metrosideri and Septoriella callistemonis from stem discolouration and leaf spots of Metrosideros sp., Cadophora neoregeliae from leaf spots of Neoregelia sp., Flexuomyces asteliae (incl. Flexuomyces gen. nov.) and Mollisia asteliae from leaf spots of Astelia chathamica, Ophioceras freycinetiae from leaf spots of Freycinetia banksii, Phaeosphaeria caricis-sectae from leaf spots of Carex secta. Norway, Cuphophyllus flavipesoides on soil in semi-natural grassland, Entoloma coracis on soil in calcareous Pinus and Tilia forests, Entoloma cyaneolilacinum on soil semi-natural grasslands, Inocybe norvegica on gravelly soil. Pakistan, Butyriboletus parachinarensis on soil in association with Quercus baloot. Poland, Hyalodendriella bialowiezensis on debris beneath fallen bark of Norway spruce Picea abies. Russia, Bolbitius sibiricus on а moss covered rotting trunk of Populus tremula, Crepidotus wasseri on debris of Populus tremula, Entoloma isborscanum on soil on calcareous grasslands, Entoloma subcoracis on soil in subalpine grasslands, Hydropus lecythiocystis on rotted wood of Betula pendula, Meruliopsis faginea on fallen dead branches of Fagus orientalis, Metschnikowia taurica from fruits of Ziziphus jujube, Suillus praetermissus on soil, Teunia lichenophila as endophyte from Cladonia rangiferina. Slovakia, Hygrocybe fulgens on mowed grassland, Pleuroflammula pannonica from corticated branches of Quercus sp. South Africa, Acrodontium burrowsianum on leaves of unidentified Poaceae, Castanediella senegaliae on dead pods of Senegalia ataxacantha, Cladophialophora behniae on leaves of Behnia sp., Colletotrichum cliviigenum on leaves of Clivia sp., Diatrype dalbergiae on bark of Dalbergia armata, Falcocladium heteropyxidicola on leaves of Heteropyxis canescens, Lapidomyces aloidendricola as epiphyte on brown stem of Aloidendron dichotomum, Lasionectria sansevieriae and Phaeosphaeriopsis sansevieriae on leaves of Sansevieria hyacinthoides, Lylea dalbergiae on Diatrype dalbergiae on bark of Dalbergia armata, Neochaetothyrina syzygii (incl. Neochaetothyrina gen. nov.) on leaves of Syzygium chordatum, Nothophaeomoniella ekebergiae (incl. Nothophaeomoniella gen. nov.) on leaves of Ekebergia pterophylla, Paracymostachys euphorbiae (incl. Paracymostachys gen. nov.) on leaf litter of Euphorbia ingens, Paramycosphaerella pterocarpi on leaves of Pterocarpus angolensis, Paramycosphaerella syzygii on leaf litter of Syzygium chordatum, Parateichospora phoenicicola (incl. Parateichospora gen. nov.) on leaves of Phoenix reclinata, Seiridium syzygii on twigs of Syzygium chordatum, Setophoma syzygii on leaves of Syzygium sp., Starmerella xylocopis from larval feed of an Afrotropical bee Xylocopa caffra, Teratosphaeria combreti on leaf litter of Combretum kraussii, Teratosphaericola leucadendri on leaves of Leucadendron sp., Toxicocladosporium pterocarpi on pods of Pterocarpus angolensis. Spain, Cortinarius bonachei with Quercus ilex in calcareus soils, Cortinarius brunneovolvatus under Quercus ilex subsp. ballota in calcareous soil, Extremopsis radicicola (incl. Extremopsis gen. nov.) from root-associated soil in a wet heathland, Russula quintanensis on acidic soils, Tubaria vulcanica on volcanic lapilii material, Tuber zambonelliae in calcareus soil. Sweden, Elaphomyces borealis on soil under Pinus sylvestris and Betula pubescens. Tanzania, Curvularia tanzanica on inflorescence of Cyperus aromaticus. Thailand, Simplicillium niveum on Ophiocordyceps camponoti-leonardi on underside of unidentified dicotyledonous leaf. USA, Calonectria californiensis on leaves of Umbellularia californica, Exophiala spartinae from surface sterilised roots of Spartina alterniflora, Neophaeococcomyces oklahomaensis from outside wall of alcohol distillery. Vietnam, Fistulinella aurantioflava on soil. Morphological and culture characteristics are supported by DNA barcodes.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; ITS nrDNA barcodes ; LSU ; new taxa ; systematics
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  • 20
    facet.materialart.
    Unknown
    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 46, pp. 240-271
    Publication Date: 2024-04-09
    Description: Recent studies on the fungal families Lophiostomataceae and Lophiotremataceae (Pleosporales) have provided varying phylogenetic and taxonomic results concerning constituent genera and species. By adding DNA sequences of 24 new strains of Lophiostomataceae and nine new strains of Lophiotremataceae to a sequence data matrix from international databases, we provide a new understanding of the relationships within these families. Multigene analysis of the four molecular markers ITS, LSU, TEF1-α, and RPB2 reveals that the genera within Lophiotremataceae are phylogenetically well supported. Lophiostoma myriocarpum is recognised as a species of Lophiotrema in contrast to earlier concepts. In Lophiostomataceae, we resurrect a broad generic concept of the genus Lophiostoma and reduce 14 genera to synonymy: Alpestrisphaeria, Biappendiculispora, Capulatispora, Coelodictyosporium, Guttulispora, Lophiohelichrysum, Lophiopoacea, Neopaucispora, Neotrematosphaeria, Platystomum, Pseudocapulatispora, Pseudolophiostoma, Pseudoplatystomum, and Sigarispora. Nine new species are described based on molecular data and in most cases supported by morphological characters: Antealophiotrema populicola, Atrocalyx nordicus, Lophiostoma carpini, Lophiostoma dictyosporium, Lophiostoma erumpens, Lophiostoma fusisporum, Lophiostoma jotunheimenense, Lophiostoma plantaginis, and Lophiostoma submuriforme. Lophiostoma caespitosum and Lophiotrema myriocarpum are lecto- and epitypified to stabilise their species concepts. High intraspecific variability of several morphological traits is common within Lophiostomataceae.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Lophiostomataceae ; Lophiotremataceae ; molecular phylogeny ; new taxa ; Pleosporales ; taxonomy
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  • 21
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    Unknown
    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 46, pp. 26-62
    Publication Date: 2024-04-09
    Description: The circumscription and composition of the Hyaloscyphaceae are controversial and based on poorly sampled or unsupported phylogenies. The generic limits within the hyaloscyphoid fungi are also very poorly understood. To address this issue, a robust five-gene Bayesian phylogeny (LSU, RPB1, RPB2, TEF-1α, mtSSU; 5521 bp) with a focus on the core group of Hyaloscyphaceae and Arachnopezizaceae is presented here, with comparative morphological and histochemical characters. A wide representative sampling of Hyaloscypha supports it as monophyletic and shows H. aureliella (subgenus Eupezizella) to be a strongly supported sister taxon. Reinforced by distinguishing morphological features, Eupezizella is here recognised as a separate genus, comprising E. aureliella, E. britannica, E. roseoguttata and E. nipponica (previously treated in Hyaloscypha). In a sister group to the Hyaloscypha-Eupezizella clade a new genus, Mimicoscypha, is created for three seldom collected and poorly understood species, M. lacrimiformis, M. mimica (nom. nov.) and M. paludosa, previously treated in Phialina, Hyaloscypha and Eriopezia, respectively. The Arachnopezizaceae is polyphyletic, because Arachnoscypha forms a monophyletic group with Polydesmia pruinosa, distant to Arachnopeziza and Eriopezia; in addition, Arachnopeziza variepilosa represents an early diverging lineage in Hyaloscyphaceae s.str. The hyphae originating from the base of the apothecia in Arachnoscypha are considered anchoring hyphae (vs a subiculum) and Arachnoscypha is excluded from Arachnopezizaceae. A new genus, Resinoscypha, is established to accommodate Arachnopeziza variepilosa and A. monoseptata, originally described in Protounguicularia. Mimicoscypha and Resinoscypha are distinguished among hyaloscyphoid fungi by long tapering multiseptate hairs that are not dextrinoid or glassy, in combination with ectal excipulum cells with deep amyloid nodules. Unique to Resinoscypha is cyanophilous resinous content in the hairs concentrated at the apex and septa. Small intensely amyloid nodules in the hairs are furthermore characteristic for Resinoscypha and Eupezizella. To elucidate species limits and diversity in Arachnopeziza, mainly from Northern Europe, we applied genealogical concordance phylogenetic species recognition (GCPSR) using analyses of individual datasets (ITS, LSU, RPB1, RPB2, TEF-1α) and comparative morphology. Eight species were identified as highly supported and reciprocally monophyletic. Four of these are newly discovered species, with two formally described here, viz. A. estonica and A. ptilidiophila. In addition, Belonium sphagnisedum, which completely lacks prominent hairs, is here combined in Arachnopeziza, widening the concept of the genus. Numerous publicly available sequences named A. aurata represent A. delicatula and the confusion between these two species is clarified. An additional four singletons are considered to be distinct species, because they were genetically divergent from their sisters. A highly supported five-gene phylogeny of Arachnopezizaceae identified four major clades in Arachnopeziza, with Eriopezia as a sister group. Two of the clades include species with a strong connection to bryophytes; the third clade includes species growing on bulky woody substrates and with pigmented exudates on the hairs; and the fourth clade species with hyaline exudates growing on both bryophytes and hardwood. A morphological account is given of the composition of Hyaloscyphaceae and Arachnopezizaceae, including new observations on vital and histochemical characters
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Arachnoscypha ; epibryophytic ; genealogical species ; Helotiales ; subiculum ; type studies
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  • 22
    facet.materialart.
    Unknown
    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 47, pp. 45-105
    Publication Date: 2024-04-09
    Description: The current list of Chinese quarantine pests includes 130 fungal species. However, recent changes in the taxonomy of fungi following the one fungus = one name initiative and the implementation of DNA phylogeny in taxonomic revisions, resulted in many changes of these species names, necessitating an update of the current list. In addition, many quarantine fungi lack modern morphological descriptions and authentic DNA sequences, posing significant challenges for the development of diagnostic protocols. The aim of the present study was to review the taxonomy and names of the 33 Chinese quarantine fungi in Dothideomycetes, and provide reliable DNA barcodes to facilitate rapid identification. Of these, 23 names were updated according to the single name nomenclature system, including one new combination, namely Cophinforma tumefaciens comb. nov. (syn. Sphaeropsis tumefaciens). On the basis of phylogenetic analyses and morphological comparisons, a new genus Xenosphaeropsis is introduced to accommodate the monotypic species Xenosphaeropsis pyriputrescens comb. nov. (syn. Sphaeropsis pyriputrescens), the causal agent of a post-harvest disease of pears. Furthermore, four lectotypes (Ascochyta petroselini, Mycosphaerella ligulicola, Physalospora laricina, Sphaeria lingam), three epitypes (Ascochyta petroselini, Phoma lycopersici, Sphaeria lingam), and two neotypes (Ascochyta pinodella, Deuterophoma tracheiphila) are designated to stabilise the use of these names. A further four reference strains are introduced for Cophinforma tumefaciens, Helminthosporium solani, Mycocentro spora acerina, and Septoria linicola. In addition, to assist future studies on these important pathogens, we sequenced and assembled whole genomes for 17 species, including Alternaria triticina, Boeremia foveata, B. lycopersici, Cladosporium cucumerinum, Didymella glomerata, Didymella pinodella, Diplodia mutila, Helminthosporium solani, Mycocentrospora acerina, Neofusicoccum laricinum, Parastagonospora pseudonodorum, Plenodomus libanotidis, Plenodomus lingam, Plenodomus tracheiphilus, Septoria petroselini, Stagonosporopsis chrysanthemi, and Xenosphaeropsis pyriputrescens.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Chinese quarantine fungi ; DNA barcodes ; genomes ; morphology ; new taxa ; phylogeny ; plant pathogens ; typification
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  • 23
    Publication Date: 2024-04-09
    Description: During extensive surveys of global Phytophthora diversity 14 new species detected in natural ecosystems in Chile, Indonesia, USA(Louisiana), Sweden, Ukraine and Vietnam were assigned to Phytophthora major Clade 10 based on a multigene phylogeny of nine nuclear and three mitochondrial gene regions. Clade 10 now comprises three subclades. Subclades 10a and 10b contain species with nonpapillate sporangia, a range of breeding systems and a mainly soil- and waterborne lifestyle. These include the previously described P. afrocarpa, P. gallica and P. intercalaris and eight of the new species: P. ludoviciana, P. procera, P. pseudogallica, P. scandinavica, P. subarctica, P. tenuimura, P. tonkinensis and P. ukrainensis. In contrast, all species in Subclade 10c have papillate sporangia and are self-fertile (or homothallic) with an aerial lifestyle including the known P. boehmeriae, P. gondwanensis, P. kernoviae and P. morindae and the new species P. celebensis, P. chilensis, P. javanensis, P. multiglobulosa, P. pseudochilensis and P. pseudokernoviae. All new Phytophthora species differed from each other and from related species by their unique combinations of morphological characters, breeding systems, cardinal temperatures and growth rates. The biogeography and evolutionary history of Clade 10 are discussed. We propose that the three subclades originated via the early divergence of pre-Gondwanan ancestors 〉 175 Mya into water- and soilborne and aerially dispersed lineages and subsequently underwent multiple allopatric and sympatric radiations during their global spread.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; allopatric ; biogeography ; evolution ; Gondwana ; Laurasia ; oomycete ; phylogeny ; radiation ; sympatric
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  • 24
    facet.materialart.
    Unknown
    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 46, pp. 116-128
    Publication Date: 2024-04-08
    Description: Several plant pathogenic Parastagonospora species have been identified infecting wheat and other cereals over the past 50 years. As new lineages were discovered, naming conventions grew unwieldy and the relationships with previously recognized species remained unclear. We used genome sequencing to clarify relationships among these species and provided new names for most of these species. Six of the nine described Parastagonospora species were recovered from wheat, with five of these species coming from Iran. Genome sequences revealed that three strains thought to be hybrids between P. nodorum and P. pseudonodorum were not actually hybrids, but rather represented rare gene introgressions between those species. Our data are consistent with the hypothesis that P. nodorum originated as a pathogen of wild grasses in the Fertile Crescent, then emerged as a wheat pathogen via host-tracking during the domestication of wheat in the same region. The discovery of a diverse array of Parastagonospora species infecting wheat in Iran suggests that new wheat pathogens could emerge from this region in the future.
    Keywords: Ecology ; Evolution ; Behavior and Systematics
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  • 25
    facet.materialart.
    Unknown
    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 67 no. 2, pp. 77-96
    Publication Date: 2024-04-08
    Description: Historic herbaria can provide a wealth of information on a diversity of topics, including the past occurrence of plants, their abundance, names and uses. However, 16th and 17th century herbaria are rare and very fragile, and can best be studied after digitization. The collection of Naturalis Biodiversity Center in Leiden, the Netherlands, contains two book herbaria by Jacob Breyne (1637–1697) of Danzig (presently Gdańsk, Poland). These herbaria, dated 1659 and 1673, contain a total of 105 specimens in various states of intactness, and with or without original labels. The identity of the specimens in the Leiden Breyne herbaria was not completely assessed previously. Here we discuss the taxa represented within these two historic herbaria as well as the information contained in the handwritten texts within them. The two Breyne herbaria combined were found to contain 62 species, representing 24 plant families. Both herbaria contain several species now rare around Gdańsk, including two species currently considered regionally extinct (Swertia perennis (Gentianaceae) and Dactylorhiza viridis (Orchidaceae)). Labels with the specimens give a range of information on the collecting locations, ecology, abundance and/or use of the species. The Leiden Breyne herbaria reveal changes in the flora of northern Poland over the course of three centuries, as well as pre-Linnaean nomenclature, historic uses of plants and international correspondence between scientists.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Gdańsk ; historic herbaria ; history of botany ; Poland ; Pomerania
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  • 26
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    Unknown
    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 50 no. 1, pp. 123-157
    Publication Date: 2024-04-08
    Description: A revision, based on morphological and multigene analysis, of the Clitocella species currently present in Europe is provided. Portions of nrITS rDNA, nr28S rDNA (LSU), RNA polymerase II second largest subunit (RPB2), translation elongation factor 1-alpha (EF-1α), and ATPase subunit 6 (ATP6), were used to sort out the relationships of the species within the genus. Three subgenera were recognized: Clitocella subg. Clitocella encompassing C.popinalis, C.colorata, C.mundula, C.nigrescens, C.obscura and the new species C.solaris from Switzerland; the new Clitocella subg. Paraclitopilus including C.fallax and C.blancii; and the new Clitocella subg. Rhodopleurella for accommodating C. termitophila, a peculiar entity characterized by a pleurotoid habit and growing on decaying, abandoned termite nests in the Dominican Republic. Clitocella colorata originally described from China is here reported and described for the first time in Europe (Italy and Estonia). Rhodocybe cupressicola and Clitopilus ammophilus are reduced to later synonyms of Rhodopaxillus nigrescens; similarly, Clitopilus amarus is treated as a later synonym of Omphalia fallax while Rhodocybe amarella and R. ochraceopallida of Rhodopaxillus blancii. Finally, Austrian and Swedish herbarium collections identified as Rhodocybe, a doubtful taxon considered by several modern authors occasionally as either a similar but distinct species from R.popinalis or as a dwarfish, puny and odourless form of R. popinalis, have been proved to be R. tugrulii, a species recently described from Turkey and Estonia, and also later reported from Italy and USA.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Agaricomycetes ; Basidiomycota ; Rhodocybe ; taxonomy ; Tricholomatineae
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  • 27
    facet.materialart.
    Unknown
    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 50 no. 1, pp. 27-47
    Publication Date: 2024-04-08
    Description: Arthroderma is the most diverse genus of dermatophytes, and its natural reservoir is considered to be soil enriched by keratin sources. During a study on the diversity of dermatophytes in wild small rodents in the Czech Republic, we isolated several strains of Arthroderma. To explore the diversity and ecological significance of these isolates from rodents (n = 29), we characterised the strains genetically (i.e., sequenced ITS, tubb and tef1α), morphologically, physiologically, and by conducting mating experiments. We then compared the rodent-derived strains to existing ITS sequence data from GenBank and the GlobalFungi Database to further investigate biogeography and the association of Arthroderma species with different types of environments. In total, eight Arthroderma species were isolated from rodents, including four previously described species (A. crocatum, A. cuniculi, A. curreyi, A. quadrifidum) and four new species proposed herein, i.e., A. rodenticum, A. simile, A. zoogenum and A. psychrophilum. The geographical distribution of these newly described species was not restricted to the Czech Republic nor rodents. Additional isolates were obtained from bats and other mammals, reptiles, and soil from Europe, North America, and Asia. Data mining showed that the genus has a diverse ecology, with some lineages occurring relatively frequently in soil, whereas others appeared to be more closely associated with live animals, as we observed in A. rodenticum. Low numbers of sequence reads ascribed to Arthroderma in soil show that the genus is rare in this environment, which supports the hypothesis that Arthroderma spp. are not soil generalists but rather strongly associated with animals and keratin debris. This is the first study to utilise existing metabarcoding data to assess biogeographical, ecological, and diversity patterns in dermatophytes.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Arthroderma ; geophilic dermatophytes ; GlobalFungi ; mating type genes ; new taxa ; polyphasic taxonomy ; wild rodents
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  • 28
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 46, pp. 1-25
    Publication Date: 2024-04-08
    Description: Here we explore the diversity of one morphologically distinguishable genus in the Mucoromycotina, Backusella, in south-eastern Australia. We isolated more than 200 strains from locations across the states of Victoria and Tasmania. Characterization of these strains using a combination of approaches including morphology, sucrose utilization and whole genome sequencing for 13 strains, revealed 10 new species. The genetic basis for interspecies variation in sucrose utilization was found to be the presence of a gene encoding an invertase enzyme. The genus Backusella is revised and a new key for species identification produced. Given that we have more than doubled the number of species in this genus, this work demonstrates that there may be considerable undiscovered species diversity in the early diverging fungal lineages.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Backusella ; genome sequencing ; invertase ; Mucorales ; new taxa ; polyphasic taxonomy ; zygospore
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  • 29
    facet.materialart.
    Unknown
    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 47, pp. 1-44
    Publication Date: 2024-04-08
    Description: The Lactifluus clarkeae complex is a commonly observed, generally brightly coloured, group of mushrooms that are usually associated with Nothofagus or Myrtaceous hosts in Australia and New Zealand. For this study collections labelled as ‘Lactarius clarkeae’, ‘Russula flocktoniae’ and ‘Lactarius subclarkeae’ were examined morphologically and molecularly. Analyses of molecular data showed a high cryptic diversity, with sequences scattered across 11 clades in three subgenera within Lactifluus, and a single collection in Russula. We select epitypes to anchor the currently accepted concepts of Lf. clarkeae s.str. and Lf. flocktoniae s.str. The name Lf. subclarkeae could not be applied to any of the collections examined, as none had a lamprotrichoderm pileipellis. Lactifluus clarkeae var. aurantioruber is raised to species level, and six new species are described, three in subg. Lactifluus: Lf. jetiae, Lf. pagodicystidiatus, and Lf. rugulostipitatus, and three in subg. Gymnocarpi: Lf. albens, Lf. psammophilus, and Lf. pseudoflocktoniae. A new collection of Lf. russulisporus provides a significant range extension for the species. Untangling this complex will enable better identification of species and increase understanding of diversity and specific habitat associations of macrofungi.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; cryptic species ; integrated taxonomy ; lactarioid ; morphology ; new taxa ; section Tomentosi
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  • 30
    facet.materialart.
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 46, pp. 163-187
    Publication Date: 2024-04-08
    Description: A survey of Penicillium in the fynbos biome from South Africa resulted in the isolation of 61 species of which 29 were found to be new. In this study we focus on Penicillium section Canescentia, providing a phylogenetic re-evaluation based on the analysis of partial beta-tubulin (BenA), calmodulin (CaM) and RNA polymerase II second largest subunit (RPB2) sequence data. Based on phylogenies we show that five fynbos species are new and several previously assigned synonyms of P. canescens and P. janczewskii should be considered as distinct species. As such, we provide descriptions for the five new species and introduce the new name P. elizabethiae for the illegitimate P. echinatum. We also update the accepted species list and synonymies of section Canescentia species and provide a review of extrolites produced by these species.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; DNA barcodes ; Genealogical Concordance ; Phylogenetic Species ; Recognition (GCPSR) ; new taxa ; secondary metabolites ; series Atroveneta ; series Canescentia
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  • 31
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 47, pp. 106-135
    Publication Date: 2024-04-08
    Description: Citrus is an important and widely cultivated fruit crop in South China. Although the species of fungal diseases of leaves and fruits have been extensively studied, the causal organisms of branch diseases remain poorly known in China. Species of Botryosphaeriaceae are known as important fungal pathogens causing branch diseases on citrus in the USA and Europe. To determine the diversity of Botryosphaeriaceae species associated with citrus branch diseases in China, surveys were conducted in the major citrus-producing areas from 2017 to 2020. Diseased tissues were collected from twigs, branches and trunks with a range of symptoms including cankers, cracking, dieback and gummosis. Based on morphological characteristics and phylogenetic comparison of the DNA sequences of the internal transcribed spacer region (ITS), the translation elongation factor 1-alpha gene (tef1), the β-tubulin gene (tub2) and the DNA-directed RNA polymerase II second largest subunit (rpb2), 111 isolates from nine provinces were identified as 18 species of Botryosphaeriaceae, including Botryosphaeria dothidea, B. fabicerciana, Diplodia seriata, Dothiorella alpina, Do. plurivora, Lasiodiplodia citricola, L. iraniensis, L. microconidia, L. pseudotheobromae, L. theobromae, Neodeightonia subglobosa, Neofusicoccum parvum, and six previously undescribed species, namely Do. citrimurcotticola, L. guilinensis, L. huangyanensis, L. linhaiensis, L. ponkanicola and Sphaeropsis linhaiensis spp. nov. Botryosphaeria dothidea (28.8%) was the most abundant species, followed by L. pseudotheobromae (23.4%), which was the most widely distributed species on citrus, occurring in six of the nine provinces sampled. Pathogenicity tests indicated that all 18 species of Botryosphaeriaceae obtained from diseased citrus tissues in this study were pathogenic to the tested Citrus reticulata shoots in vitro, while not all species are pathogenic to the tested Cocktail grapefruit (C. paradisi × C. reticulata) shoots in vivo. In addition, Lasiodiplodia was the most aggressive genus both in vitro and in vivo. This is the first study to identify Botryosphaeriaceae species related to citrus branch diseases in China and the results provide a theoretical basis for the implementation of prevention and control measures.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Botryosphaeria cankers ; distribution ; new taxa ; pathogenicity ; systematics
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  • 32
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 46, pp. 63-115
    Publication Date: 2024-04-08
    Description: The Botryosphaeriales (Dothideomycetes) includes numerous endophytic, saprobic, and plant pathogenic species associated with a wide range of symptoms, most commonly on woody plants. In a recent phylogenetic treatment of 499 isolates in the culture collection (CBS) of the Westerdijk Institute, we evaluated the families and genera accommodated in this order of important fungi. The present study presents multigene phylogenetic analyses for an additional 230 isolates, using ITS, tef1, tub2, LSU and rpb2 loci, in combination with morphological data. Based on these data, 58 species are reduced to synonymy, and eight novel species are described. They include Diplodia afrocarpi (Afrocarpus, South Africa), Dothiorella diospyricola (Diospyros, South Africa), Lasiodiplodia acaciae (Acacia, Indonesia), Neofusicoccum podocarpi (Podocarpus, South Africa), N. rapaneae (Rapanea, South Africa), Phaeobotryon ulmi (Ulmus, Germany), Saccharata grevilleae (Grevillea, Australia) and S. hakeiphila (Hakea, Australia). The results have clarified the identity of numerous isolates that lacked Latin binomials or had been deposited under incorrect names in the CBS collection in the past. They also provide a solid foundation for more in-depth future studies on taxa in the order. Sequences of the tef1, tub2 and rpb2 genes proved to be the most reliable markers. At the species level, results showed that the most informative genes were inconsistent, but that a combination of four candidate barcodes (ITS, tef1, tub2 and rpb2) provided reliable resolution. Furthermore, given the large number of additional isolates included in this study, and newly generated multigene DNA datasets, several species could also be reduced to synonymy. The study illustrates the value of reassessing the identity of older collections in culture collections utilising modern taxonomic frameworks and methods.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; canker and leaf spot pathogens ; Multi-Locus Sequence Typing (MLST) ; new taxa ; systematics
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  • 33
    Publication Date: 2024-04-15
    Description: As currently delineated, Hygrophorus sect. Olivaceoumbrini is a polyphyletic assembly within subg. Colorati, encompassing glutinous and pigmented taxa. According to available literature, between a dozen and twenty species may belong in the section, mostly represented in continental and boreal forests of Europe and North America. However, the limited phylogenetic and biogeographic coverage of the genus does not presently allow for a reliable assessment of its taxonomic boundaries, nor does it provide a complete picture of species diversity within sect. Olivaceoumbrini. In an ongoing effort to confer an evolutionary backbone to Hygrophorus systematics, we assembled and analysed a dataset comprising 268 intercontinental sequences, including holotypes of 7 taxa previously not positioned phylogenetically, and enriched with collections from largely unexplored Mediterranean and Anatolian ecosystems. Overall, 30 clades are identified within 5 distinct lineages, including 11 species putatively new to science. Seven of these are formally described here as H. agathosmoides, H. albofloccosus, H. canadensis, H. limosus, H. marcocontui, H. pinophilus and H. pustulatoides spp. nov. This enriched coverage of section Olivaceoumbrini s.lat. calls for a re-evaluation of its natural boundaries into a core monophyletic clade, including H. olivaceoalbus and five closely related lookalikes, as well as the assignment of the section rank to the four remaining lineages: sect. Fuscocinerei sect. nov., sect. Limacini sect. nov., sect. Nudolidi sect. nov. and sect. Tephroleuci, respectively. We also stabilize the usage of six historical names, H. glutinifer, H. hyacinthinus, H. mesotephrus, H. olivaceoalbus, H. pustulatus and H. tephroleucus, through designation of two neotypes, three lectotypes and four epitypes.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Hygrophorus latitabundus ; Hygrophorus olivaceoalbus ; Hygrophorus persoonii ; phylogeny ; taxonomy ; waxcap
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  • 34
    Publication Date: 2024-04-19
    Description: The focus of this paper is the North American species of Cortinarius in subg. Leprocybe. Eighteen species, including twelve new ones, and two tentative (aff.) species, are delimited based on morphological and molecular data (DNA ITS-LSU sequences). Existing type specimens of species in subg. Leprocybe were also studied, and neo- or epitypes designated for C. cotoneus, C. melanotus, C. phrygianus and C. venetus to stabilize the nomenclature. In addition, to improve the infrasubgeneric classification of Leprocybe three new sections are proposed: sect. Fuscotomentosi, sect. Melanoti and sect. Squamiveneti. This study adds substantial information to the knowledge of subg. Leprocybe in North America against a background of European species. To date only two species, C. phrygianus and C. squamivenetus have been reported from both continents.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Agaricales ; barcodes ; Cortinariaceae ; ectomycorrhiza ; Europe ; ITS ; North America
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  • 35
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 67 no. 2, pp. 156-158
    Publication Date: 2024-04-23
    Description: A new species of Freycinetia Gaudich. (Pandanaceae; Freycinetoidea) with obvious pseudopetiolate basal leaf from Mount Tombrok in the vicinity of theArfak Mountains, West Papua, Indonesian New Guinea, is newly described as Freycinetia pseudopetiolataA.P.Keim, K.Kartawinata & W.Sujarwo. The possession of the pseudopetiolate basal leaf form places this new species in the section Pseudopetiolosae; thus marking the first presence of the section for mainland New Guinea.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Arfak ; Freycinetia ; New Guinea ; Pandanaceae ; Papua ; Pseudopetiolosae
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  • 36
    Publication Date: 2024-04-23
    Description: Blastosporella zonata is one of the few basidiomycete fungi that produce asexual spores (conidia) on the mushroom. The role of these conidia in the fungal lifecycle is not known. We tested whether conidia are being utilized in local dispersal by looking for signatures of clonality in 21 samples from three localities separated by about three kilometres in Murillo, Colombia. To identify clonally related individuals, we sequenced three polymorphic markers at two unlinked loci (nuclear rRNA: ITS and LSU, and TEF1α) for all collections plus three herbarium samples. We identified two sets of clonally related individuals growing closely together in one of the three localities, and only one pair shared between localities. In all three localities we observed multiple non-clonally related dikaryons showing that sexual reproduction is also important. Our results indicate that the conidia on the mushroom are primarily important for local dispersal. Unexpectedly, our results also indicate two reproductively isolated populations, possibly representing cryptic biological species.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Blastosporella ; Lyophyllaceae ; basidiomycetes ; clonality ; conidia ; cryptic species ; genetic population structure ; insect-association ; population genetics
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  • 37
    Publication Date: 2024-04-23
    Description: Fungi are rich in complexes of cryptic species that need a combination of different approaches to be delimited, including genomic information. Beauveria (Cordycipitaceae, Hypocreales) is a well-known genus of entomopathogenic fungi, used as a biocontrol agent. In this study we present a polyphasic taxonomy regarding two widely distributed complexes of Beauveria: B. asiatica and B. bassiana s.lat. Some of the genetic groups as previously detected within both taxa were either confirmed or fused using population genomics. High levels of divergence were found between two clades in B. asiatica and among three clades in B. bassiana, supporting their subdivision as distinct species. Morphological examination focusing on the width and the length of phialides and conidia showed no difference among the clades within B. bassiana while conidial length was significantly different among clades within B. asiatica. The secondary metabolite profiles obtained by liquid chromatography-mass spectrometry (LC-MS) allowed a distinction between B. asiatica and B. bassiana, but not between the clades therein. Based on these genomic, morphological, chemical data, we proposed a clade of B. asiatica as a new species, named B. thailandica, and two clades of B. bassiana to respectively represent B. namnaoensis and B. neobassiana spp. nov. Such closely related but divergent species with different host ranges have potential to elucidate the evolution of host specificity, with potential biocontrol application.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Beauveria ; chemotaxonomy ; population genomics ; taxonomy
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  • 38
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 46, pp. 129-162
    Publication Date: 2024-04-23
    Description: The Fusarium fujikuroi species complex (FFSC) includes more than 60 phylogenetic species (phylospecies) with both phytopathological and clinical importance. Because of their economical relevance, a stable taxonomy and nomenclature is crucial for species in the FFSC. To attain this goal, we examined type specimens and representative cultures of several species by employing morphology and phylogenetic analyses based on partial gene fragments of the translation elongation factor 1-alpha (tef1), beta-tubulin (tub2), calmodulin (cmdA), RNA polymerase largest subunit (rpb1) and RNA polymerase II second largest subunit (rpb2). Based on these results three new species were delimited in the FFSC. Two of these phylospecies clustered within the African clade, and one in the American clade. Epitypes were also designated for six previously described FFSC species including F. proliferatum and F. verticillioides, and a neotype designated for F. subglutinans. Furthermore, both F. acutatum and F. ophioides, which were previously invalidly published, are validated.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; epitypification ; fungal taxonomy ; morphology ; neotypification ; new taxa ; validation
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  • 39
    Publication Date: 2024-04-23
    Description: Molecular phylogenies in the past decade have demonstrated that the described diversity of Cortinarius is still underestimated, especially outside continental and boreal ecoregions where the genus has been historically investigated. We tackled this issue by revisiting the so far unresolved subgenus Leprocybe, and focused on the largely unexplored Mediterranean hotspot of biodiversity. The sequencing and phylogenetic analysis of 161 vouchered collections from Austria, Cyprus, France, Germany, Italy and Spain, including 16 types, allowed for the delineation of 11 species in this lineage, three of them recognised as new to science and formally introduced as C. jimenezianus, C. selinolens and C. viridans spp. nov., respectively. Interestingly, the newly described species exhibit a strict Mediterranean distribution, and one of them is putatively endemic to the island of Cyprus, highlighting the remarkable potential of this neglected ecoregion to uncover further undescribed diversity of Cortinarius in the future. The present work also unveils 23 synonymies in this subgenus, as well as previously undetected crypticism within C. venetus. Next Generation Sequencing carried out on three old and contaminated holotypes, successfully decrypts their phylogenetic identity, including that of C. leproleptopus, finally settling the long-standing controversy over the taxonomic status of this species. A brief overview of each species in the subgenus is lastly provided and a key is proposed to facilitate the identification of presently known European taxa of Leprocybe in the field.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Cedrus brevifolia ; endemism ; phylogeny ; taxonomy ; Veneti
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  • 40
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 68 no. 1, pp. 70-72
    Publication Date: 2024-03-16
    Description: A new species of Freycinetia Gaudich. (Pandanaceae; Freycinetoidea) with a lateral infructescence and \nrostrate berries each with 4\xe2\x80\x938 stigmatic remains, rarely 4, fairly common 8, mostly 5\xe2\x80\x936. The possession of rostrate \nberries places this new species in the section Devrieseella. The existence of F. wiharjae extends the distribution of the \nsection further east to mainland New Guinea, while it was previously only known from Sulawesi and the Philippines.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Arfak ; Devrieseella ; Freycinetia ; New Guinea ; Pandanaceae ; Papua
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  • 41
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 49, pp. 136-170
    Publication Date: 2024-03-16
    Description: Nolanea is a well-known and long-established subgenus of the genus Entoloma traditionally defined mainly by the mycenoid basidiocarps of the included species. Until now, revisions of this subgenus including molecular data exist only on a regional scale. In this study, the phylogeny of species of Nolanea is analysed based on multi-gene DNA sequences including data of specimens from all continents. New primers are designed for the mitochondrial small subunit and RPB2. The performance of the DNA loci in reconstructing the phylogeny in subg. Nolanea is evaluated. An ancestral state reconstruction is used to infer the character state evolution as well as the importance and reliability of morphological characters used to define subclades below subgeneric rank. Based on the results, seven sections are recognised in Nolanea: the sections Holoconiota, Infularia, Mammosa, Nolanea, Papillata, Staurospora, and the newly described sect. Elegantissima. A large phylogeny based on the fungal barcode rDNA ITS with numerous type sequences is used to evaluate current species concepts. Several names are revealed to be synonyms of older names. Four species new to science are described, namely E. altaicum, E. argillaceum, E.\xe2\x80\xafcornicolor, and E. incognitum. Lectotypes, epitypes or neotypes are designated for E. cetratum, E. clandestinum, E. conferendum, E. cuspidiferum, E. hebes, E. minutum, E. nitens, and E. rhodocylix. The re-evaluation of the limits of subg. Nolanea leads to an altered concept excluding species with distinct, lageniform cheilocystidia. The section Ameides is placed in subg. Leptonia. For several species formerly accommodated in Nolanea, but excluded now, viz., E. lepiotoides, E. rhombisporum, E. subelegans, and E. velenovskyi the taxonomic position remains unclear, because of the yet unresolved phylogeny of the whole genus Entoloma.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Agaricales ; Entolomataceae ; biogeography ; concatenated alignment ; polyphasic taxonomy ; ribosomal DNA ; species tree
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  • 42
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 68 no. 1, pp. 66-69
    Publication Date: 2024-03-17
    Description: Schoenorchis kembangleutik Yudistira & Mustaqim described here as new to science is an orchid species \ncurrently considered endemic to West Java. It is similar to S. pachyachris (J.J.Sm.) J.J.Sm. from Sumatra and Java \nbut differs in having flowers with midlobe of labellum orbicular (vs oblong) with horizontal and rounded (vs pointing \nupwards and tapering to a point) apex, the labellum side lobes white, uncinate and retrorse at the apex (vs yellow, \nstraight and erect at apex), and in having shorter spurs with straight base (2 vs 4 mm long, with geniculate base). \nA morphological description, notes on distribution, habitat and ecology, an illustration, photographs and a key to \nthe five species of Schoenorchis of Java are provided.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Aeridinae ; flora of Indonesia ; Malesia ; Schoenorchis kembangleutik ; taxonomy
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  • 43
    Publication Date: 2024-03-06
    Description: Novel species of fungi described in this study include those from various countries as follows: Argentina, Neocamarosporium halophilum in leaf spots of Atriplex undulata. Australia, Aschersonia merianiae on scale \ninsect (Coccoidea), Curvularia huamulaniae isolated from air, Hevansia mainiae on dead spider, Ophiocordyceps \npoecilometigena on Poecilometis sp. Bolivia, Lecanora menthoides on sandstone, in open semi-desert montane \nareas, Sticta monlueckiorum corticolous in a forest, Trichonectria epimegalosporae on apothecia of corticolous Megalospora sulphurata var. sulphurata, Trichonectria puncteliae on the thallus of Punctelia borreri. Brazil, Catenomargarita \npseudocercosporicola (incl. Catenomargarita gen. nov.) hyperparasitic on Pseudocercospora fijiensis on leaves of \nMusa acuminata, Tulasnella restingae on protocorms and roots of Epidendrum fulgens. Bulgaria, Anthracoidea \numbrosae on Carex spp. Croatia, Hymenoscyphus radicis from surface-sterilised, asymptomatic roots of Microthlaspi \nerraticum, Orbilia multiserpentina on wood of decorticated branches of Quercus pubescens. France, Calosporella \npunctatispora on dead corticated twigs of Acer opalus. French West Indies (Martinique), Eutypella lechatii on dead \ncorticated palm stem. Germany, Arrhenia alcalinophila on loamy soil. Iceland, Cistella blauvikensis on dead grass \n(Poaceae). India, Fulvifomes maritimus on living Peltophorum pterocarpum, Fulvifomes natarajanii on dead wood \nof Prosopis juliflora, Fulvifomes subazonatus on trunk of Azadirachta indica, Macrolepiota bharadwajii on moist \nsoil near the forest, Narcissea delicata on decaying elephant dung, Paramyrothecium indicum on living leaves of \nHibiscus hispidissimus, Trichoglossum syamviswanathii on moist soil near the base of a bamboo plantation. Iran, \nVacuiphoma astragalicola from stem canker of Astragalus sarcocolla. Malaysia, Neoeriomycopsis fissistigmae (incl. \nNeoeriomycopsidaceae fam. nov.) on leaf spots on flower Fissistigma sp. Namibia, Exophiala lichenicola lichenicolous on Acarospora cf. luederitzensis. Netherlands, Entoloma occultatum on soil, Extremus caricis on dead leaves \nof Carex sp., Inocybe pseudomytiliodora on loamy soil. Norway, Inocybe guldeniae on calcareous soil, Inocybe
    Keywords: ITS nrDNA barcodes ; LSU ; new taxa ; systematics
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  • 44
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 51 no. 1, pp. 229-256
    Publication Date: 2024-03-06
    Description: Species in Diaporthe have broad host ranges and cosmopolitan geographic distributions, occurring as \nendophytes, saprobes and plant pathogens. Previous studies have indicated that many Diaporthe species are associated with Citrus. To further determine the diversity of Diaporthe species associated with citrus diseases in China, \nwe conducted extensive surveys in major citrus-producing areas from 2017\xe2\x80\x932020. Diseased tissues were collected \nfrom leaves, fruits, twigs, branches and trunks showing a range of symptoms including melanose, dieback, gummosis, \nwood decay and canker. Based on phylogenetic comparisons of DNA sequences of the internal transcribed spacer \nregions (ITS), calmodulin (cal), histone H3 (his3), translation elongation factor 1-alpha (tef1) and beta-tubulin (tub2), \n393 isolates from 10 provinces were identified as belonging to 36 species of Diaporthe, including 32 known species, \nnamely D. apiculata, D. biconispora, D. biguttulata, D. caryae, D. citri, D. citriasiana, D. compacta, D. discoidispora, \nD. endophytica, D. eres, D. fusicola, D. fulvicolor, D. guangxiensis, D. hongkongensis, D. hubeiensis, D. limonicola, \nD. litchii, D. novem, D. passifloricola, D. penetriteum, D. pescicola, D. pometiae, D. sackstonii, D. sennicola, D. sojae, \nD. spinosa, D. subclavata, D. tectonae, D. tibetensis, D. unshiuensis, D. velutina and D. xishuangbanica, and four \nnew species, namely D. gammata, D. jishouensis, D. ruiliensis and D. sexualispora. Among the 32 known species, \n14 are reported for the first time on Citrus, and two are newly reported from China. Among the 36 species, D. citri \nwas the dominant species as exemplified by its high frequency of isolation and virulence. Pathogenicity tests indicated that most Diaporthe species obtained in this study were weakly aggressive or non-pathogenic to the tested \ncitrus varieties. Only D. citri produced the longest lesion lengths on citrus shoots and induced melanose on citrus \nleaves. These results further demonstrated that a rich diversity of Diaporthe species occupy Citrus, but only a few \nspecies are harmful and D. citri is the main pathogen for Citrus in China. The present study provides a basis from \nwhich targeted monitoring, prevention and control measures can be developed.
    Keywords: Citrus diseases ; Diaporthe ; new taxa ; pathogenicity ; phylogenetic analysis
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  • 45
    Publication Date: 2024-03-06
    Description: Amylascus is a genus of ectomycorrhizal truffles within Pezizaceae that is known from Australia and \ncontains only two described species, A. herbertianus and A. tasmanicus. Species of Amylascus are closely related \nto truffles (Pachyphlodes, Luteoamylascus) and cup fungi (Plicariella) from the Northern Hemisphere. Here we \nreevaluate the species diversity of Amylascus and related taxa from southern South America and Australia based \non new morphological and molecular data. We identify previously undocumented diversity and morphological variability in ascospore color, ascospore ornamentation, hymenial construction, epithecium structure and the amyloid \nreaction of the ascus in Melzer\xe2\x80\x99s reagent. We redescribe two Amylascus species from Australia and describe seven \nnew Amylascus species, five from South America and two from Australia. This is the first report of Amylascus species from South America. We also describe the new South American genus Nothoamylascus as sister lineage to \nthe Pachyphlodes-Amylascus-Luteoamylascus clade (including Amylascus, Luteoamylascus, Pachyphlodes, and \nPlicariella). We obtained ITS sequences of mitotic spore mats from Nothoamylascus erubescens gen. & sp. nov. \nand four of the seven newly described Amylascus species, providing the first evidence of mitotic spore mats in \nAmylascus. Additional ITS sequences from mitotic spore mats reveal the presence of nine additional undescribed \nAmylascus and one Nothoamylascus species that do not correspond to any sampled ascomata. We also identify \nthree additional undescribed Amylascus species based on environmental sequences from the feces of two grounddwelling bird species from Chile, Scelorchilus rubecula and Pteroptochos tarnii. Our results indicate that ascomata \nfrom Amylascus and Nothoamylascus species are rarely collected, but molecular data from ectomycorrhizal roots \nand mitotic spore mats indicate that these species are probably common and widespread in southern SouthAmerica. \nFinally, we present a time-calibrated phylogeny that is consistent with a late Gondwanan distribution. The time since \nthe most recent common ancestor of: 1) the family Pezizaceae had a mean of 276 Ma (217\xe2\x80\x93337 HPD); 2) the \nAmylascus-Pachyphlodes-Nothoamylascus-Luteoamylascus clade had a mean of 79 Ma (60\xe2\x80\x93100 HPD); and 3) \nthe Amylascus-Pachyphlodes clade had a mean of 50 Ma (38\xe2\x80\x9362 HPD). The crown age of Pachyphlodes had a \nmean of 39 Ma (25\xe2\x80\x9342 HPD) and Amylascus had a mean age of 28 Ma (20\xe2\x80\x9337 HPD), falling near the EoceneOligocene boundary and the onset of the Antarctic glaciation (c. 35 Ma).
    Keywords: ectomycorrhizae ; fungal systematics ; hypogeous ; mitotic spore mat ; new taxa ; Patagonia ; Pezizaceae ; Pezizales ; Southern Gondwana
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  • 46
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 51 no. 1, pp. 194-228
    Publication Date: 2024-03-06
    Description: Black yeasts comprise a group of Ascomycota of the order Chaetothyriales with highly variable morphology, \na great diversity of ecological niches and life cycles. Despite the ubiquity of these fungi, their diversity in freshwater \nsediments is still poorly understood. During a survey of culturable Ascomycota from river and stream sediments \nin various sampling sites in Spain, we obtained 47 isolates of black yeasts by using potato dextrose agar supplemented with cycloheximide. A preliminary morphological study and sequence analyses of the internal transcribed \nspacer region (ITS) and the large subunit (LSU) of the nuclear rDNA revealed that most of the isolates belonged \nto the family Herpotrichiellaceae. We have confidently identified 30 isolates representing the following species: \nCapronia pulcherrima, Cladophialophora emmonsii, Exophiala equina, Exophiala pisciphila, Exophiala radicis, and \nPhialophora americana. However, we encountered difficulty in assigning 17 cultures to any known species within \nChaetothyriales. Combining phenotypic and multi-locus phylogenetic analyses based on the ITS, LSU, \xce\xb2-tubulin \n(tub2) and translation elongation factor 1-\xce\xb1 (tef1-\xce\xb1) gene markers, we propose the new genus Aciculomyces in the \nHerpotrichiellaceae to accommodate the novel species Aciculomyces restrictus. Other novel species in this family \ninclude Cladophialophora denticulata, Cladophialophora heterospora, Cladophialophora irregularis, Exophiala \ncandelabrata, Exophiala dehoogii, Exophiala ramosa, Exophiala verticillata and Phialophora submersa. The new \nspecies Cyphellophora spiralis, closely related to Cyphellophora suttonii, is described, and the phylogeny of the \ngenus Anthopsis in the family Cyphellophoraceae is discussed. By utilizing these four markers, we were able to \nstrengthen the phylogenetic resolution and provide more robust taxonomic assessments within the studied group. \nOur findings indicate that freshwater sediments may serve as a reservoir for intriguing black yeasts, which warrant \nfurther investigation to address gaps in phylogenetic relationships, particularly within Herpotrichiellaceae.
    Keywords: Ascomycota ; biodiversity ; Cyphellophoraceae ; fluvial sediments ; Herpotrichiellaceae ; new taxa ; phylogeny ; taxonomy
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  • 47
    Publication Date: 2024-03-06
    Description: The genus Podaxis was first described from India by Linnaeus in 1771, but several revisions of the \ngenus have left the taxonomy unclear. Forty-four Podaxis species names and nine intraspecific varieties are currently accepted, but most fungarium specimens are labelled Podaxis pistillaris. Recent molecular analyses based \non barcoding genes suggest that the genus comprises several species, but their status is largely unresolved. Here \nwe obtained basidiospores and photographs from 166 fungarium specimens from around the world and generated \na phylogeny based on rDNA internal transcribed spacer ITS1, 5.8S and ITS2 (ITS), and a phylogenomic analysis of \n3839 BUSCO genes from low-coverage genomes for a subset of the specimens. Combining phylogenetics, phylogenomics, morphology, ecology, and geographical distribution, spanning 250 years of collections, we propose that \nthe genus includes at least 16 unambiguous species. Based on 10 type specimens (holotype, paratype, and syntype), \nfour recorded species were confirmed, P. carcinomalis, P. deflersii, P. emerici, and P. farlowii. Comparing phylogenetic \nanalysis with described species, including morphology, ecology, and distribution, we resurrected P. termitophilus \nand designated neotypes, epitypes, or lectotypes for five previously described species, P. aegyptiacus, P. africana, \nP. beringamensis, P. calyptratus, and P. perraldieri. Lastly, based on phylogenies and morphology of type material, \nwe synonymized three reported species, P. algericus, P. arabicus, and P. rugospora with P. pistillaris, and described \nfive new species that we named P. desolatus, P. inyoensis, P. mareebaensis, P. namaquensis, and P. namibensis.
    Keywords: Agaricaceae ; ecology ; fungaria ; geography ; museomics ; novel species ; phylogenomics ; Podaxis ; typification
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  • 48
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 51 no. 1, pp. 89-124
    Publication Date: 2024-03-06
    Description: The class Myxomycetes consists of free-living protists characterised by their complex life cycle, which \nincludes both microscopic (amoebae, flagellates and cists) and macroscopic stages (spore-bearing fruiting bodies, \nsclerotia, and plasmodia). Within it, the order Physarales, with more than 450 recognised species, constitutes the \nlargest group. Although previous studies have shown the polyphyly of some of the traditionally accepted genera, \nits internal phylogenetic relationships have remained uncertain so far, and together with the lack of data for some \nkey species, it prevented any taxonomic and nomenclatural revisions. We have compiled a substantially expanded \ndataset in terms of both taxon sampling and molecular data, including most of the genera described to date and \nfour unlinked DNA regions, for which we provide partial sequences: nSSU, EF-1\xce\xb1, \xce\xb1-Tub, and mtSSU, analysed \nthrough maximum likelihood and Bayesian methods. Our results confirm that the family Didymiaceae is paraphyletic to the rest of Physarales. Within Didymiaceae s.lat., the recent reinstatement of the genus Polyschismium for \nmost species traditionally ascribed to Lepidoderma, except for the type (Ronikier et al. 2022), is further supported \nhere, as well as the definite inclusion of the genus Mucilago in Didymium and Lepidoderma s.str. (L. tigrinum) in \nDiderma (Prikhodko et al. 2023). Additionally, the genus Diachea is redefined to include some species previously \ntreated in Physaraceae (Craterium spp. with true columella). Within the monophyletic family Physaraceae, most \ngenera are recovered as polyphyletic, suggesting that they should be no longer accepted as currently defined. \nHowever, the lack of resolution of some relationships within Physaraceae prevents us from resuscitating or creating several new genera to mitigate polyphyly. Among the well-defined groups with clear molecular signatures, we \npropose two taxonomic and nomenclatural changes at generic level: 1) a new genus, Nannengaella, is proposed \nfor a major clade containing Physarum globuliferum and other species with heavily calcified sporophores and, often, \na true calcareous columella; 2) Lignydium is resurrected for the clade containing Fuligo muscorum. Additionally, \nTrichamphora is suggested as the correct name for the clade containing Physarum pezizoideum. The taxonomy \nand nomenclature of some provisional genera, currently synonymous with Fuligo and Physarum, are disentangled, \nand we provide a comprehensive and updated nomenclatural conspectus that can be used when better resolved \nphylogenies are obtained. In total, 22 new combinations are proposed in different genera. A provisional key to the \ngenera of the order is also provided.
    Keywords: \xce\xb1-Tub ; classification ; EF-1\xce\xb1 ; Lignydium ; mtSSU ; Nannengaella ; new taxa ; nomenclature ; nSSU ; systematics ; taxonomy
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  • 49
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 51 no. 1, pp. 152-193
    Publication Date: 2024-03-06
    Description: Russula subgenus Compactae is a group of ectomycorrhizal basidiomycetes, usually with large pileate \nfruitbodies. European members of the group are characterised by the absence of bright colours on the surfaces of \ntheir pilei, the context turning grey to black after cutting, the abundance of short lamellulae in the hymenophore, and \nspores with an inamyloid suprahilar spot and with low reticulate ornamentation. Our multi-locus phylogenetic study \nconfirmed that this morphological delimitation corresponds to a well-supported clade. Within this clade, 16 species \nare recognised in Europe, of which five belong to the R. albonigra lineage and were described in a previous study, \nwhile eleven are fully described in this study. The application of the names R. acrifolia, R. adusta, R. anthracina, \nR. atramentosa, R. densissima, R. nigricans and R. roseonigra is based on the position of sequences retrieved from \ntypes or authentic material. Based on type sequences, R. fuliginosa is synonymised with R. anthracina and two \nvarieties of R. anthracina are considered synonyms of R. atramentosa. The application of the name R. densifolia \nis based on a morphological match with the traditional species interpretation and the neotype specimen. Three \nspecies are described as new, R. marxmuelleriana sp. nov., R. picrophylla sp. nov. and R. thuringiaca sp. nov. This \nstudy recognises three major lineages and two species with isolated positions within the European Compactae \nand a morphological barcode was assigned to the species using an analysis of 23 selected characters. A search of \npublicly available sequences from the UNITE database revealed that the majority of species are host tree generalists and widely distributed in temperate and Mediterranean areas of Europe. Russula adusta is the only species so \nfar proven to form ectomycorrhiza exclusively with conifers.
    Keywords: barcode ; Basidiomycota ; coalescent species delimitation ; diversity ; ectomycorrhiza ; Fungi ; integrative taxonomy ; new taxa ; phylogeny
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  • 50
    Publication Date: 2024-03-11
    Description: Applying molecular methods to fungi establishing lichenized associations with green algae or cyanobacteria has repeatedly revealed the existence of numerous phylogenetic taxa overlooked by classical taxonomic approaches. Here, we report taxonomical conclusions based on multiple species delimitation and validation analyses performed on an eight-locus dataset that includes world-wide representatives of the dolichorhizoid and scabrosoid clades in section Polydactylon of the genus Peltigera. Following the recommendations resulting from a consensus species delimitation approach and additional species validation analysis (BPP) performed in this study, we present a total of 25 species in the dolichorhizoid clade and nine in the scabrosoid clade, including respectively 18 and six species that are new to science and formally described. Additionally, one combination and three varieties (including two new to science) are proposed in the dolichorhizoid clade. The following 24 new species are described: P. appalachiensis, P. asiatica, P. borealis, P. borinquensis, P. chabanenkoae, P. clathrata, P. elixii, P. esslingeri, P. flabellae, P. gallowayi, P. hawaiiensis, P. holtanhartwigii, P. itatiaiae, P. hokkaidoensis, P. kukwae, P. massonii, P. mikado, P. nigriventris, P. orientalis, P. rangiferina, P. sipmanii, P. stanleyensis, P. vitikainenii and P. willdenowii; the following new varieties are introduced: P. kukwae var. phyllidiata and P. truculenta var. austroscabrosa ; and the following new combination is introduced: P. hymenina var. dissecta. Each species from the dolichorhizoid and scabrosoid clades is morphologically and chemically described, illustrated, and characterised with ITS sequences. Identification keys are provided for the main biogeographic regions where species from the two clades occur. Morphological and chemical characters that are commonly used for species identification in the genus Peltigera cannot be applied to unambiguously recognise most molecularly circumscribed species, due to high variation of thalli formed by individuals within a fungal species, including the presence of distinct morphs in some cases, or low interspecific variation in others. The four commonly recognised morphospecies: P. dolichorhiza, P. neopolydactyla, P. pulverulenta and P. scabrosa in the dolichorhizoid and scabrosoid clades represent species complexes spread across multiple and often phylogenetically distantly related lineages. Geographic origin of specimens is often helpful for species recognition; however, ITS sequences are frequently required for a reliable identification.
    Keywords: cryptic species ; identification key ; new taxa ; Peltigerales ; species delimitation
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  • 51
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 68 no. 2, pp. 1-2
    Publication Date: 2024-03-14
    Repository Name: National Museum of Natural History, Netherlands
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  • 52
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 45, pp. 221-249
    Publication Date: 2024-04-28
    Description: Specimens of Nectria spp. and Nectriella rufofusca were obtained from the fungarium of Pier Andrea Saccardo, and investigated via a morphological and molecular approach based on MiSeq technology. ITS1 and ITS2 sequences were successfully obtained from 24 specimens identified as ‘Nectria’ sensu Saccardo (including 20 types) and from the type specimen of Nectriella rufofusca. For Nectria ambigua, N. radians and N. tjibodensis only the ITS1 sequence was recovered. On the basis of morphological and molecular analyses new nomenclatural combinations for Nectria albofimbriata, N. ambigua, N. ambigua var. pallens, N. granuligera, N. peziza subsp. reyesiana, N. radians, N. squamuligera, N. tjibodensis and new synonymies for N. congesta, N. flageoletiana, N. phyllostachydis, N. sordescens and N. tjibodensis var. crebrior are proposed. Furthermore, the current classification is confirmed for Nectria coronata, N. cyanostoma, N. dolichospora, N. illudens, N. leucotricha, N. mantuana, N. raripila and Nectriella rufofusca. This is the first time that these more than 100-yr-old specimens are subjected to molecular analysis, thereby providing important new DNA sequence data authentic for these names.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; ancient DNA ; Ascomycota ; Hypocreales ; Illumina ; ribosomal sequences ; Sordariomycetes
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  • 53
    Publication Date: 2024-04-30
    Description: Novel species of fungi described in this study include those from various countries as follows: Australia, Austroboletus asper on soil, Cylindromonium alloxyli on leaves of Alloxylon pinnatum, Davidhawksworthia quintiniae on leaves of Quintinia sieberi, Exophiala prostantherae on leaves of Prostanthera sp., Lactifluus lactiglaucus on soil, Linteromyces quintiniae (incl. Linteromyces gen. nov.) on leaves of Quintinia sieberi, Lophotrichus medusoides from stem tissue of Citrus garrawayi, Mycena pulchra on soil, Neocalonectria tristaniopsidis (incl. Neocalonectria gen. nov.) and Xyladictyochaeta tristaniopsidis on leaves of Tristaniopsis collina, Parasarocladium tasmanniae on leaves of Tasmannia insipida, Phytophthora aquae-cooljarloo from pond water, Serendipita whamiae as endophyte from roots of Eriochilus cucullatus, Veloboletus limbatus (incl. Veloboletus gen. nov.) on soil. Austria, Cortinarius glaucoelotus on soil. Bulgaria, Suhomyces rilaensis from the gut of Bolitophagus interruptus found on a Polyporus sp. Canada, Cantharellus betularum among leaf litter of Betula, Penicillium saanichii from house dust. Chile, Circinella lampensis on soil, Exophiala embothrii from rhizosphere of Embothrium coccineum. China, Colletotrichum cycadis on leaves of Cycas revoluta. Croatia, Phialocephala melitaea on fallen branch of Pinus halepensis. Czech Republic, Geoglossum jirinae on soil, Pyrenochaetopsis rajhradensis from dead wood of Buxus sempervirens. Dominican Republic, Amanita domingensis on litter of deciduous wood, Melanoleuca dominicana on forest litter. France, Crinipellis nigrolamellata (Martinique) on leaves of Pisonia fragrans, Talaromyces pulveris from bore dust of Xestobium rufovillosum infesting floorboards. French Guiana, Hypoxylon hepaticolor on dead corticated branch. Great Britain, Inocybe ionolepis on soil. India, Cortinarius indopurpurascens among leaf litter of Quercus leucotrichophora. Iran, Pseudopyricularia javanii on infected leaves of Cyperus sp., Xenomonodictys iranica (incl. Xenomonodictys gen. nov.) on wood of Fagus orientalis. Italy, Penicillium vallebormidaense from compost. Namibia, Alternaria mirabibensis on plant litter, Curvularia moringae and Moringomyces phantasmae (incl. Moringomyces gen. nov.) on leaves and flowers of Moringa ovalifolia, Gobabebomyces vachelliae (incl. Gobabebomyces gen. nov.) on leaves of Vachellia erioloba, Preussia procaviae on dung of Procavia capensis. Pakistan, Russula shawarensis from soil on forest floor. Russia, Cyberlindnera dauci from Daucus carota. South Africa, Acremonium behniae on leaves of Behnia reticulata, Dothiora aloidendri and Hantamomyces aloidendri (incl. Hantamomyces gen. nov.) on leaves of Aloidendron dichotomum, Endoconidioma euphorbiae on leaves of Euphorbia mauritanica, Eucasphaeria proteae on leaves of Protea neriifolia, Exophiala mali from inner fruit tissue of Malus sp., Graminopassalora geissorhizae on leaves of Geissorhiza splendidissima, Neocamarosporium leipoldtiae on leaves of Leipoldtia schultzii, Neocladosporium osteospermi on leaf spots of Osteospermum moniliferum, Neometulocladosporiella seifertii on leaves of Combretum caffrum, Paramyrothecium pituitipietianum on stems of Grielum humifusum, Phytopythium paucipapillatum from roots of Vitis sp., Stemphylium carpobroti and Verrucocladosporium carpobroti on leaves of Carpobrotus quadrifolius, Suttonomyces cephalophylli on leaves of Cephalophyllum pilansii. Sweden, Coprinopsis rubra on cow dung, Elaphomyces nemoreus from deciduous woodlands. Spain, Polyscytalum pini-canariensis on needles of Pinus canariensis, Pseudosubramaniomyces septatus from stream sediment, Tuber lusitanicum on soil under Quercus suber. Thailand, Tolypocladium flavonigrum on Elaphomyces sp. USA, Chaetothyrina spondiadis on fruits of Spondias mombin, Gymnascella minnisii from bat guano, Juncomyces patwiniorum on culms of Juncus effusus, Moelleriella puertoricoensis on scale insect, Neodothiora populina (incl. Neodothiora gen. nov.) on stem cankers of Populus tremuloides, Pseudogymnoascus palmeri from cave sediment. Vietnam, Cyphellophora vietnamensis on leaf litter, Tylopilus subotsuensis on soil in montane evergreen broadleaf forest. Morphological and culture characteristics are supported by DNA barcodes.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; ITS nrDNA barcodes ; LSU ; new taxa ; systematics
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  • 54
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 65 no. 3, pp. 188-203
    Publication Date: 2024-05-20
    Description: The following 24 new synonyms in the orchid genus Oberonia are proposed, correct name (synonym(s)): O. aporophylla (O. longirepens); O. bertoldii (O. gracillima, O. laeta); O. bifida (O. celebica, O. fissiglossa); O. brunoniana (O. wallichii, O. saintberchmansii); O. costeriana (O. vulcanica); O. ensiformis (O. vesiculifera); O. griffithiana (O. khuongii); O. heliophila (O. asperula, O. rivularis, O. inversiflora, O. hosokawai); O. obcordata (O. menghaiensis); O. pachyphylla (O. janae); O. pachystachya (O. trignonoglossa); O. rhizomatosa (O. repens, O. torana, O. ponapensis, O. chenii, Hippeophyllum microphyllum); O. spathipetala (O. odontopetala, O. pectinata). Oberonia anicpita is not a distinct name introduced by Náves in F.M.Blanco but an orthographic variant of O. anceps, itself a synonym of O. lycopodioides. The spelling of several species epithets in honour of Takahide Hosokawa, a man, are corrected to hosokawai: Carpesium hosokawae (Asteraceae), Glochidion hosokawae (Phyllanthaceae), Pandanus hosokawae (Pandanaceae), Psychotria hosokawae (Rubiaceae), Eria hosokawae, Microtatorchis hosokawae, Habenaria hosokawae, Moerenhoutia hosokawae (all Orchidaceae).
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; nomenclature ; taxonomic vandalism ; typification ; variability
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  • 55
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 66 no. 1, pp. 53-56
    Publication Date: 2024-05-22
    Description: Chromosome numbers and other karyological data for ten Stemona species and for Stichoneuron caudatum are presented, including first reports for Stemona burkillii, S. involuta, S. mairei and S. phyllantha.All investigated taxa of Stemona exhibit n = x = 7 (2n = 14) chromosomes. For Stichoneuron caudatum an earlier count revealing 2n = 18 is confirmed. The observed chromosome lengths range between 0.9 and 6.9 μm (largest chromosome in Stichoneuron caudatum).Additionally, the genome sizes of seven Stemona species and of Stichoneuron caudatum are reported. The obtained results are compared with literature data and discussed.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; chromosome length ; chromosome number ; genome size ; karyology ; Stemona ; Stemonaceae ; Stichoneuron
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  • 56
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 65 no. 3, pp. 205-211
    Publication Date: 2024-05-22
    Description: A phylogenetic analysis on specimen level was made in possible support of a multivariate analysis of the Calamus javensis complex. Nine species, at some time recognized within the complex, and several recognisable forms were included. The phylogenetic markers used were the nuclear 5S spacer (5S nrDNA) and the chloroplast Maturase K (matK). The Bayesian analysis showed that only 5S provided some resolution. The 50 % majority rule consensus showed one major polytomy with a few supported groups, which were mainly morphologically unsupported pairs of specimens. However, one group, the form C. tenompokensis (the only distinct group in a multivariate analysis) is morphologically distinct and phylogenetically monophyletic and can be recognized as a species. Of all other recognizable forms, we only consider C. acuminatus to be regarded as a variety as it was not supported in the morphometric analysis.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Calamoideae ; Calamus javensis ; chloroplast DNA ; intraspecific variation ; matK ; molecular phylogeny ; nuclear DNA ; paraphyletic ; rattan
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  • 57
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 66 no. 1, pp. 57-81
    Publication Date: 2024-05-22
    Description: The furfuraceous species of Syzygium subg. Syzygium in Papuasia are revised. The scurfy, furfuraceous epidermis that is a feature of the inflorescence branches and sometimes also of the hypanthium, the commonly chestnut brown colour of the dried leaves, and the reduced calyx that occurs in many species are characteristic features of the group. Within this subgenus, a new section Furfuraceum is described to accommodate these morphologically recognisable species. Descriptions are provided for each of the 40 species recognised, 28 of which are new. An identification key, distribution maps and an index to numbered exsiccatae are provided.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Furfuraceum ; identification key ; maps ; Myrtaceae ; Papuasia ; revision ; Syzygium
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  • 58
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 66 no. 1, pp. 1-52
    Publication Date: 2024-05-22
    Description: The Municipal Museum of Zierikzee (The Netherlands) houses a loose-leafed herbarium containing 354 plant specimens, of which the provenance, age and maker were until recently unknown. By studying the plant specimens, paper, decorations and labels, an image was conveyed of an early 18th century herbarium that matched the description of a herbarium from the legacy of Jacob Ligtvoet (1684–1752), gardener in the Hortus botanicus of Leiden (The Netherlands) from 1703 till his death in 1752. This herbarium is one of the oldest garden herbaria of its kind and contains 306 unique species, of which 201 are currently native to the Netherlands. Exotic species come from the Mediterranean (81 spp.), South Africa (8), the Americas (10) and tropical Asia (7) and for the larger part from Europe and temperate Asia. Based on our comparison of names on the oldest labels, this collection of dried plants was probably started after publication of the first garden catalogue by the prefect of the Leiden hortus and professor of botany Herman Boerhaave (1710), but before the second edition in 1720. This historic herbarium reflects the state-of-the-art of botanical science and the international network of Dutch botanical gardens in the early 18th century
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; 18th century ; Boerhaave ; gardeners ; Holland ; Leiden ; Ligtvoet ; Linnaeus
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  • 59
    Publication Date: 2024-05-22
    Description: The largest and most recently emended Marasmius sect. Globulares (Globulares-Sicci complex) has increased in number of species annually while its infrasectional organization remains inconclusive. During forays in remnants of theAtlantic Rainforest in Brazil, 24 taxa of Marasmius belonging to sect. Globulares were collected from which nine are herein proposed as new: Marasmius altoribeirensis, M. ambicellularis, M. hobbitii, M. luteoolivaceus, M. neotropicalis, M. pallidibrunneus, M. pseudoniveoaffinis, M. rhabarbarinoides and M. venatifolius. We took this opportunity to evaluate sect. Globulares sensuAntonín & Noordel. in particular, combining morphological examination and both single and multilocus phylogenetic analyses using LSU and ITS data, including Neotropical samples to a broader and more globally distributed sampling of over 200 strains. Three different approaches were developed in order to better use the genetic information via Bayesian and Maximum Likelihood analyses. The implementation of these approaches resulted in: i) the phylogenetic placement of the new and known taxa herein studied among the other taxa of a wide sampling of the section; ii) the reconstruction of improved phylogenetic trees presenting more strongly supported resolution especially from intermediate to deep nodes; iii) clearer evidence indicating that the series within sect. Sicci and sect. Globulares in the traditional concept are non-monophyletic by this more stringent evaluation; and iv) the existence of several monophyletic suprespecific groups equivalent to the stirpes of Singer – clusters of morphologically similar species. These two latter points corroborate with findings of previous studies implementing analyses with the entire genus. Based on these results, we proposed a new infrasectional classification elevating Singer’s concept of stirpes to series. Thirteen new series, the emendation of three extant series and three subsections gathering these series based on the major clades are proposed.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Agaricales ; Marasmiaceae ; Neotropics ; phylogenetics ; stirpes ; systematics ; taxonomy
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  • 60
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 66 no. 1, pp. 93-95
    Publication Date: 2024-05-23
    Description: A widespread Canthium species of upland northern Thailand, Laos, and China, known erroneously as C. parvifolium (described from India) or C. horridum (described from Java) is formally described as a new species Canthium obscurum. Aphotograph of fruiting twigs and line drawings of the flower are added. Canthium parvifolium is lectotypified by a herbarium specimen in P.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics
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  • 61
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 67 no. 1, pp. viii-xiii
    Publication Date: 2024-05-10
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics
    Repository Name: National Museum of Natural History, Netherlands
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  • 62
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 45, pp. 101-131
    Publication Date: 2024-05-09
    Description: Plantation-grown Eucalyptus (Myrtaceae) and other trees residing in the Myrtales have been widely planted in southern China. These fungal pathogens include species of Cryphonectriaceae that are well-known to cause stem and branch canker disease on Myrtales trees. During recent disease surveys in southern China, sporocarps with typical characteristics of Cryphonectriaceae were observed on the surfaces of cankers on the stems and branches of Myrtales trees. In this study, a total of 164 Cryphonectriaceae isolates were identified based on comparisons of DNA sequences of the partial conserved nuclear large subunit (LSU) ribosomal DNA, internal transcribed spacer (ITS) regions including the 5.8S gene of the ribosomal DNA operon, two regions of the β-tubulin (tub2/tub1) gene, and the translation elongation factor 1-alpha (tef1) gene region, as well as their morphological characteristics. The results showed that eight species reside in four genera of Cryphonectriaceae occurring on the genera Eucalyptus, Melastoma (Melastomataceae), Psidium (Myrtaceae), Syzygium (Myrtaceae), and Terminalia (Combretaceae) in Myrtales. These fungal species include Chrysoporthe deuterocubensis, Celoporthe syzygii, Cel. eucalypti, Cel. guangdongensis, Cel. cerciana, a new genus and two new species, as well as one new species of Aurifilum. These new taxa are hereby described as Parvosmorbus gen. nov., Par. eucalypti sp. nov., Par. guangdongensis sp. nov., and Aurifilum terminali sp. nov. Pathogenicity tests showed that the eight species of Cryphonectriaceae are pathogenic to two Eucalyptus hybrid seedlings, Melastoma sanguineum branches, and Psidium guajava and Syzygium jambos seedlings. The overall data showed that Chr. deuterocubensis is the most aggressive, followed by Par. eucalypti. Significant differences in tolerance were observed between the two tested Eucalyptus hybrid genotypes, suggesting that disease-tolerant genotypes can be selected for disease management in the Eucalyptus industry.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Eucalyptus ; fungal pathogen ; host jump ; Myrtaceae ; new taxa ; plantation forestry
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  • 63
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 44, pp. 161-205
    Publication Date: 2024-05-09
    Description: We present a multilocus phylogeny of the class Dacrymycetes, based on data from the 18S, ITS, 28S, RPB1, RPB2, TEF-1α, 12S, and ATP6 DNAregions, with c. 90 species including the types of most currently accepted genera. A variety of methodological approaches was used to infer phylogenetic relationships among the Dacrymycetes, from a supermatrix strategy using maximum likelihood and Bayesian inference on a concatenated dataset, to coalescence-based calculations, such as quartet-based summary methods of independent single-locus trees, and Bayesian integration of single-locus trees into a species tree under the multispecies coalescent. We evaluate for the first time the taxonomic usefulness of some cytological phenotypic characters, i.e., vacuolar contents (vacuolar bodies and lipid bodies), number of nuclei of recently discharged basidiospores, and pigments, with especial emphasis on carotenoids. These characters, along with several others traditionally used for the taxonomy of this group (basidium shape, presence and morphology of clamp connections, morphology of the terminal cells of cortical/ marginal hyphae, presence and degree of ramification of the hyphidia), are mapped on the resulting phylogenies and their evolution through the class Dacrymycetes discussed. Our analyses reveal five lineages that putatively represent five different families, four of which are accepted and named. Three out of these four lineages correspond to previously circumscribed and published families (Cerinomycetaceae, Dacrymycetaceae, and Unilacrymaceae), and one is proposed as the new family Dacryonaemataceae. Provisionally, only a single order, Dacrymycetales, is accepted within the class. Furthermore, the systematics of the two smallest families, Dacryonaemataceae and Unilacrymaceae, are investigated to the species level, using coalescence-based species delimitation on multilocus DNAdata, and a detailed morphological study including morphometric analyses of the basidiospores. Three species are accepted in Dacryonaema, the type, Da. rufum, the newly combined Da. macnabbii (basionym Dacrymyces macnabbii), and a new species named Da. macrosporum. Two species are accepted in Unilacryma, the new U. bispora, and the type, U. unispora, the latter treated in a broad sense pending improved sampling across the Holarctic
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Carotenoids ; coalescence analyses ; cytology ; Dacrymycetes ; Dacryonaema ; species delimitations ; Unilacryma
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  • 64
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 68 no. 2, pp. 85-138
    Publication Date: 2024-05-02
    Description: The dried plant collection, now known as the ‘Van Royen herbarium’, was assembled by Adriaan and David van Royen, successive Leiden professors of botany in the period 1729–1799. The significance of this herbarium is partly due to the fact that Linnaeus was able to study Adriaan’s collections extensively when he stayed in The Netherlands, such that it must have influenced, to some extent, his subsequent publications, notably Species Plantarum (1753). In this review we track the complex history of the herbarium and follow its physical housing through time. Poor storage conditions in the 18th and 19th centuries may account for the loss of an unknown number of specimens originally in the herbarium. The history of the herbarium of Nicolaas Meerburg, head gardener in the Leiden botanical garden from 1774–1814, where he had worked from 1752, is closely connected with that of the Van Royens, and is also discussed here. We explore the composition of the ‘Van Royen herbarium’ and document who contributed to it. Altogether 80 plant collectors or original herbarium owners are identified. For example, there is a substantial set of specimens collected by Carl Peter Thunberg in Japan and many specimens from the Cape region of South Africa, which must have been gathered by him during his first stay there. Another large set is that collected by Johann Gerhard König in Ceylon (nowadays Sri Lanka) and there are many specimens from the collections of Albrecht von Haller and Sébastien Vaillant. The herbarium contains several seed collections used for Joseph Gaertner’s De Fructibus (listed in Appendix 4) and also many specimens assembled by Adriaan van Royen for his Ericetum Africanum project. Last, but not least significant among the rest, there are specimens cut out of a book herbarium owned by Jacob Breyne with plants collected by Carolus Schweiker (or Sweiker) around Montpellier (France) in 1666. Information necessary for the correct attribution of specimens is presented, complete with information enabling attribution of individual specimens to their original owners. Example barcodes of specimens from individual contributors and their handwriting(s) can be found in Appendix 3. Brief details of the life and work of Adriaan and David van Royen is given in Appendices 1 and 2. The significance of the herbarium for the typification of Linnaean and other species names is discussed.
    Repository Name: National Museum of Natural History, Netherlands
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 66 no. 3, pp. 223-226
    Publication Date: 2024-05-03
    Description: A new species of Chingia, known only from Vanikoro in the Solomon Islands, is described and illustrated. It is distinctive in having flat, thickened, tortuous stipe scales. It is most closely related to an accession of Chingia clavipilosa from Mount Kinabalu, from which it is distinguished by its lack of hyaline acicular hairs on the abaxial laminar axes. Other Chingia species in the Solomon Islands are distinguished by having abundant stiff, terete stipe scales.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Chingia ; endangered species ; endemic ; fern ; Papuasia ; Solomon Islands ; Thelypteris
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  • 66
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 66 no. 3, pp. 236-241
    Publication Date: 2024-05-03
    Description: We describe a new Hoya species from Central Kalimantan, H. buntokensis, and a new subspecies of H. wallichii from West Kalimantan, Hoya wallichii subsp. tenebrosa. Hoya buntokensis is part of a group of four species that form specialised leaf structures harbouring ants (here defined as megadomatia), and it is most similar to H. undulata. Hoya buntokensis differs from H. undulata in lamina margin (flat vs undulate); shape of corona lobes outer processes (fan shaped vs elliptic), and in the pollinarium morphology (corpusculum larger than pollinia vs corpusculum smaller than pollinia). Both H. wallichii subsp. wallichii and H. wallichii subsp. tenebrosa are slender plants with ovate to oblong, thinly coriaceous glabrous leaves, slender peduncles with 1 or 2 flowers open at a time, and broadly campanulate corollas. Hoya wallichii subsp. tenebrosa differs from H. wallichii subsp. wallichii in corolla colour (dark purple with a paler edge vs white-cream), corona lobe shape and surface (broadly elliptic, spreading and with a minute inner process, almost black with a velvety surface vs kidney-shaped, erect and with a well-developed acuminate inner process, purple with a shiny surface).
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; ant plant ; epiphyte ; heath forest ; Hoya darwinii ; Hoya mitrata ; Hoya undulata ; Hoya wallichii ; megadomatium ; myrmecophyte ; Southeast Asia
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 66 no. 3, pp. x-xiv
    Publication Date: 2024-05-03
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics
    Repository Name: National Museum of Natural History, Netherlands
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 66 no. 3, pp. 242-248
    Publication Date: 2024-05-03
    Description: The fern genus Microsorum is not monophyletic, with previous phylogenetic analyses finding three lineages to group not with the type species, but to form a grade related to the 13 species of Lecanopteris. These three lineages have recently been recognised as separate genera: Bosmania, Dendroconche, and Zealandia. Here, we explore the morphological characterisation of Lecanopteris and these other three lecanopteroid genera. While the traditional circumscription of Lecanopteris has seemed sacrosanct, its defining morphological character states of rhizome cavities and ant brooding associations occur in other lecanopteroid ferns and elsewhere in the Polypodiaceae. Instead, we suggest that the morphological characterisation of an expanded Lecanopteris including the Dendroconche and Zealandia lineages is just as good, if not better, with the pertinent character states being the absence of sclerenchyma strands in the rhizome and at least some fronds having Nooteboom’s type 5 venation pattern. This wider circumscription is also better able to accommodate phylogenetic uncertainty, and it means that groups of species traditionally placed together in a single genus are not distributed across different genera. General users familiar with the narrower circumscription of Lecanopteris will not be significantly disrupted, because there is little geographic overlap with the lineages added to the genus. Consequently, we make new combinations in Lecanopteris for 11 species and one subspecies.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Bosmania ; Colysis ; Dendroconche ; lecanopteroid ; microsoroid ; taxonomy ; Zealandia
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  • 69
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 45, pp. 68-100
    Publication Date: 2024-05-03
    Description: Gymnosporangium species (Pucciniaceae, Pucciniales, Basidiomycota) are the causal agents of cedarapple rust diseases, which can lead to significant economic losses to apple cultivars. Currently, the genus contains 17 described species that alternate between spermogonial/aecial stages on Malus species and telial stages on Juniperus or Chamaecyparis species, although these have yet to receive a modern systematic treatment. Furthermore, prior studies have shown that Gymnosporangium does not belong to the Pucciniaceae sensu stricto (s.str.), nor is it allied to any currently defined rust family. In this study we examine the phylogenetic placement of the genus Gymnosporangium. We also delineate interspecific boundaries of the Gymnosporangium species on Malus based on phylogenies inferred from concatenated data of rDNA SSU, ITS and LSU and the holomorphic morphology of the entire life cycle. Based on these results, we propose a new family, Gymnosporangiaceae, to accommodate the genus Gymnosporangium, and recognize 22 Gymnosporangium species parasitic on Malus species, of which G. lachrymiforme, G. shennongjiaense, G. spinulosum, G. tiankengense and G. kanas are new. Typification of G. asiaticum, G. fenzelianum, G. juniperi-virginianae, G. libocedri, G. nelsonii, G. nidus-avis and G. yamadae are proposed to stabilize the use of names. Morphological and molecular data from type materials of 14 Gymnosporangium species are provided. Finally, morphological characteristics, host alternation and geographical distribution data are provided for each Gymnosporangium species on Malus.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Apple rust ; host alternation ; new taxa ; species delimitation
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  • 70
    Publication Date: 2024-05-03
    Description: Species of the ectomycorrhizal genus Lactifluus, and often entire sections, are typically unique to a single continent. Given these biogeographic patterns, an interesting region to study their diversity is Central America and the Caribbean, since the region is closely connected to and often considered a part of the North American continent, but biogeographically belong to the Neotropical realm, and comprises several regions with different geologic histories. Based on a multi-gene phylogeny and morphological study, this study shows that Central America, Mexico and the Caribbean harbour at least 35 Lactifluus species, of which 33 were never reported outside of this region. It was found that species from the Caribbean generally show affinities to South American taxa, while species from the Central American mainland generally show affinities to Northern hemispheric taxa. We hypothesise that host specificity and/or climate play a crucial role in these different origins of diversity. Because of these different affinities, Caribbean islands harbour a completely different Lactifluus diversity than the Central American mainland. The majority of species occurring on the islands can be considered endemic to certain islands or island groups. In this paper, detailed morphological descriptions are given, with a focus on the unique diversity of the islands, and identification keys to all hitherto described Lactifluus species occurring in Central America and the Caribbean are provided. One new section, Lactifluus sect. Nebulosi, and three new species, Lactifluus guadeloupensis, Lactifluus lepus and Lactifluus marmoratus are described.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Antilles ; Basidiomycota ; ectomycorrhizal fungi ; French West Indies ; integrative taxonomy ; Latin America ; Middle America ; new taxa ; Russulales
    Repository Name: National Museum of Natural History, Netherlands
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  • 71
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 45, pp. 196-220
    Publication Date: 2024-05-03
    Description: Trunk disease fungal pathogens reduce olive production globally by causing cankers, dieback, and other decline-related symptoms on olive trees. Very few fungi have been reported in association with olive dieback and decline in South Africa. Many of the fungal species reported from symptomatic olive trees in other countries have broad host ranges and are known to occur on other woody host plants in the Western Cape province, the main olive production region of South Africa. This survey investigated the diversity of fungi and symptoms associated with olive dieback and decline in South Africa. Isolations were made from internal wood symptoms of 145 European and 42 wild olive trees sampled in 10 and 9 districts, respectively. A total of 99 taxa were identified among 440 fungal isolates using combinations of morphological and molecular techniques. A new species of Pseudophaeomoniella, P. globosa, had the highest incidence, being recovered from 42.8 % of European and 54.8 % of wild olive samples. This species was recovered from 9 of the 10 districts where European olive trees were sampled and from all districts where wild olive trees were sampled. Members of the Phaeomoniellales (mainly P. globosa) were the most prevalent fungi in five of the seven symptom types considered, the only exceptions being twig dieback, where members of the Botryosphaeriaceae were more common, and soft/white rot where only Basidiomycota were recovered. Several of the species identified are known as pathogens of olives or other woody crops either in South Africa or elsewhere in the world, including species of Neofusicoccum, Phaeoacremonium, and Pleurostoma richardsiae. However, 81 of the 99 taxa identified have not previously been recorded on olive trees and have unknown interactions with this host. These taxa include one new genus and several putative new species, of which four are formally described as Celerioriella umnquma sp. nov., Pseudophaeomoniella globosa sp. nov., Vredendaliella oleae gen. & sp. nov., and Xenocylindrosporium margaritarum sp. nov.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Celerioriella ; five new taxa ; Olea europaea subsp. cuspidata ; Olea europaea subsp. europaea ; phylogenetics ; Pseudophaeomoniella ; taxonomy ; Vredendaliella ; Xenocylindrosporium
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 68 no. 2, pp. 139-161
    Publication Date: 2024-05-03
    Description: This work presents updated dichotomous keys to the Amorphophallus (Araceae) species of the world based on morphological characters of the inflorescence. It is a compilation of data derived from herbarium specimens, living specimens, protologues, and following papers outlining taxonomic updates to the genus. Three new synonyms are proposed and a general key including 239 species of Amorphophallus distributed across the African, Asian, and Australian continents is included. Ten additional subkeys are provided by geographical subregion, making identification streamlined if the locality of the specimen is known. The aim of this paper is to make identification of Amorphophallus species accessible through a single manuscript, serving not only the research sector, but also citizen science. This guide provides a rapid and ac
    Keywords: Amorphophallus ; Araceae ; identification ; morphology ; synonyms ; systematics
    Repository Name: National Museum of Natural History, Netherlands
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  • 73
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 66 no. 3, pp. 275-307
    Publication Date: 2024-05-03
    Description: Southern Africa is globally known for its considerable floristic diversity and for the past several centuries the region has attracted the research attention of both foreign and southern African botanists. While the majority of the plant scientists, including taxonomists, working on the regional flora was male, women have made significant contributions to the botany of southern Africa. We provide a comprehensive review of the role women played in botany in the region, from the earliest days of recorded botanical endeavour (c. mid-17th century) and for the ensuing c. 300 years. The women are exhaustively catalogued and the parts they played in advancing botany, and where appropriate some related plant-based activities, such as horticulture, are noted and assessed. It is shown that women played an important but generally underappreciated role in botanical research, fieldwork, and specimen collecting, as well as in herbarium management and institutional development.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; gender ; herbarium ; institutional development ; research ; specimen collecting
    Repository Name: National Museum of Natural History, Netherlands
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  • 74
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 67 no. 1, pp. 20-25
    Publication Date: 2024-05-04
    Description: A revision of Leptopus and Notoleptopus (Phyllanthaceae tribe Poranthereae) in Malesia is presented. Both genera are present with a single species in Malesia, L. australis and N. decasnei, respectively. Phylogenetically the two genera are distinct, but morphologically their differences are minimal. Nomenclature, descriptions, distributions and various notes are presented, just as a technical drawing of both species.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Leptopus ; Malesia ; Phyllanthaceae ; Poranthereae ; revision ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 75
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 66 no. 3, pp. 249-262
    Publication Date: 2024-05-04
    Description: According to recent taxonomic treatments, up to 13 Nymphoides species exist in eastern Asia, with some species purported to be narrowly endemic. However, these treatments have largely covered rather limited geographic areas, whereas the genus can be found worldwide. In order to evaluate the global distinctness of currently accepted Nymphoides species in easternAsia, we quantitatively examined their distinguishing morphological characters using information from published treatments and data from herbarium specimens. Out of 13 evaluated species, nine were found to be morphologically distinct (N. aurantiaca, N. cambodiana, N. coreana, N. hastata, N. hydrophylla, N. indica, N. lungtanensis, N. parviflora, N. peltata), and the remaining species (N. coronata, N. cristata, N. siamensis, N. tonkinensis) lacked characters that clearly could distinguish them. We thus propose that the morphologically indistinct species should be considered synonymous with other Nymphoides species. Herein we establish N. parviflora comb. nov., to accommodate the species that was heretofore known by the invalid name N. parvifolia. Lectotypes are designated for Limnanthemum calycinum, L. coreanum, L. coronatum, L. hastatum, L. kleinianum, and L. tonkinense, and neotypes are designated for Menyanthes hydrophylla and M. nymphoides.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Cambodia ; China ; endemism ; Laos ; Nymphoides ; Thailand ; Vietnam
    Repository Name: National Museum of Natural History, Netherlands
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 66 no. 2, pp. 107-221
    Publication Date: 2024-05-04
    Description: This taxonomic revision of the continental African species of Monanthotaxis (Annonaceae) includes 79 species and one variety. Thirteen new species (M. aestuaria, M. bidaultii, M. confusa, M. glabra, M. hexamera, M. mcphersonii, M. quasilanceolata, M. sterilis, M. submontana, M. suffruticosa, M. ursus, M. vulcanica and M. wieringae) are described and 5 new combinations (M. biglandulosa, M. kenyensis, M. ochroleuca, M. pynaertii and M. seretii) are made. The genus Monanthotaxis consists of lianas or lianescent shrubs. It occurs throughout forests in tropical Africa and the highest species diversity is found in the Western Central African rain forests. A key for flowering material is provided, just like a synoptic key including 45 characters. Topics included in the revision are the history of the taxonomy of Monanthotaxis, morphology, leaf anatomy, floral biology, distribution and habitat, phylogeny and finally ethnobotany and phytochemistry. Each species is fully described including synonymy, notes on distribution, habitat & ecology, vernacular names, uses and a preliminary IUCN conservation status. Distribution maps are provided for all species, illustrations for 48 species and photographs of 22 species. An index of exsiccatae and an index of the scientific names are included at the end.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; distributions ; ethnobotany ; floral biology ; habitat ; leaf anatomy ; morphology ; phylogeny ; phytochemistry ; pollination ; seed dispersion
    Repository Name: National Museum of Natural History, Netherlands
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    Wiley-Blackwell
    In:  EPIC3Reviews in Aquaculture, Wiley-Blackwell, ISSN: 1753-5123
    Publication Date: 2024-05-06
    Description: Mass mortality events (MMEs) are defined as the death of large numbers of fish over a short period of time. These events can result in catastrophic losses to the Atlantic salmon aquaculture industry and the local economy. However, they are challenging to understand because of their relative infrequency and the high number of potential factors involved. As a result, the causes and consequences of MMEs in Atlantic salmon aquaculture are not well understood. In this study, we developed a structural network of causal risk factors for MMEs for aquaculture and the communities that depend on Atlantic salmon aquaculture. Using the Interpretive Structural Modeling (ISM) technique, we analysed the causes of Atlantic salmon mass mortalities due to environmental (abiotic), biological (biotic) and nutritional risk factors. The consequences of MMEs were also assessed for the occupational health and safety of aquaculture workers and their implications for the livelihoods of local communities. This structural network deepens our understanding of MMEs and points to management actions and interventions that can help mitigate mass mortalities. MMEs are typically not the result of a single risk factor but are caused by the systematic interaction of risk factors related to the environment, fish diseases, feeding/nutrition and cage-site management. Results also indicate that considerations of health and safety risk, through pre- and post-event risk assessments, may help to minimize workplace injuries and eliminate potential risks of human fatalities. Company and government assisted socio-economic measures could help mitigate post-mass mortality impacts. Appropriate and timely management actions may help reduce MMEs at Atlantic salmon cage sites and minimize the physical and social vulnerabilities of workers and local communities.
    Repository Name: EPIC Alfred Wegener Institut
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 45, pp. 163-176
    Publication Date: 2024-05-07
    Description: The genus Calonectria includes many important plant pathogens with a wide global distribution. In order to better understand the reproductive biology of these fungi, we characterised the structure of the mating type locus and flanking genes using the genome sequences for seven Calonectria species. Primers to amplify the mating type genes in other species were also developed. PCR amplification of the mating type genes and multi-gene phylogenetic analyses were used to investigate the mating strategies and evolution of mating type in a collection of 70 Calonectria species residing in 10 Calonectria species complexes. Results showed that the organisation of the MAT locus and flanking genes is conserved. In heterothallic species, a novel MAT gene, MAT1-2-12 was identified in the MAT1-2 idiomorph; the MAT1-1 idiomorph, in most cases, contained the MAT1-1-3 gene. Neither MAT1-1-3 nor MAT1-2-12 was found in homothallic Calonectria (Ca.) hongkongensis, Ca. lateralis, Ca. pseudoturangicola and Ca. turangicola. Four different homothallic MAT locus gene arrangements were observed. Ancestral state reconstruction analysis provided evidence that the homothallic state was basal in Calonectria and this evolved from a heterothallic ancestor.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Cylindrocladium ; fungal biology ; fungal pathogens ; MAT locus ; mating type ; phylogeny ; sexual reproduction
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  • 79
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 68 no. 2, pp. 73-84
    Publication Date: 2024-05-06
    Description: Detailed morphological and molecular research has led to the conclusion that the majority of the species of the genus Brachiaria have to move to the much smaller genus Urochloa. Although many of the necessary new combinations were made, in Africa a fair number of accepted species still do not yet have a name within Urochloa. Following work on WestAfrica, CentralAfrica and Madagascar, this paper now provides these new combinations for the remaining sub-SaharanAfrican species, as well as a full synonymy for all EastAfrican ones, including typification. In total, the paper deals with 40 species, for 12 of these new combinations are created, while 55 lectotypes and one neotype of both accepted names and synonyms are designated.
    Keywords: Africa ; grasses ; nomenclature ; Paniceae ; taxonomy ; typification
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  • 80
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 45, pp. 132-162
    Publication Date: 2024-05-06
    Description: Species of Diaporthe (syn. Phomopsis) are important endophytes, saprobes and pathogens, infecting a wide range of plants and resulting in important crop diseases. However, the species occurring on pear remain largely unresolved. In this study, a total of 453 Diaporthe isolates were obtained from branches of Pyrus plants (including P. bretschneideri, P. communis, P. pyrifolia and P. ussuriensis collected from 12 provinces in China) showing shoot canker symptoms. Phylogenetic analyses based on five loci (ITS, TEF, CAL, HIS, and TUB) coupled with morphology of 113 representative isolates revealed that 19 Diaporthe species were isolated, representing 13 known species (including D. caryae, D. cercidis, D. citrichinensis, D. eres, D. fusicola, D. ganjae, D. hongkongensis, D. padina, D. pescicola, D. sojae, D. taoicola, D. unshiuensis and D. velutina) and six new species described here as D. acuta, D. chongqingensis, D. fulvicolor, D. parvae, D. spinosa and D. zaobaisu. Although Koch’s postulates confirmed all species to be pathogenic, a high degree of variation in aggressiveness was observed. Moreover, these species have a high diversity, plasticity, and prevalence related to the geographical location and pear species involved.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; multi-gene phylogeny ; pathogenicity ; Pyrus ; six new taxa ; taxonomy
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  • 81
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 66 no. 3, pp. vii-ix
    Publication Date: 2024-05-05
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics
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  • 82
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 66 no. 3, pp. i-vi
    Publication Date: 2024-05-05
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics
    Repository Name: National Museum of Natural History, Netherlands
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  • 83
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 66 no. 3, pp. 227-235
    Publication Date: 2024-05-05
    Description: The riparian forest is one of the most diverse environments of the La Plata River plains. It is represented by patches of humid forests, which are a valuable source of ecosystem services and have recreational and educational potential. However, the riparian forest has undergone constant modification, worsened by private real-estate developments and a lack of government regulation. Among the reserves that protect the riparian forest, the Municipal Ecological Reserve of Avellaneda is the closest to the southern limit of the Autonomous City of Buenos Aires. Although there are around 300 species of wild fauna and flora informally registered in the area, there are only a few studies published about its biodiversity. In this work, the diversity of thirteen native and exotic ferns in the core area (Eco Área) of the reserve is characterized, the origin of the species is also evaluated and comparisons are made with other nearby protected areas. The Eco Área of the Reserve plays an important role as part of the urban reserve corridor of the La Plata River plains and constitutes a refuge for both native and exotic ruderal species. The present work represents the basis for future studies about the population dynamics and the colonization strategies of the ferns.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Buenos Aires ; diversity ; ferns ; protected areas ; riparian forest ; ruderal
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  • 84
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 66 no. 3, pp. 263-274
    Publication Date: 2024-05-05
    Description: One of the objects of the Municipal Museum Zierikzee (Province of Zealand, The Netherlands) is a historical herbarium referred to by the name the ‘Zierikzee Herbarium’. The characteristics of the specimens in the Zierikzee Herbarium are so similar to those in a herbarium at Naturalis Biodiversity Center, Leiden (L), that both must originate from the same place and time. About the latter herbarium little is known, except that it was once owned by the army-surgeon Simon(e) d’Oignies (1740–1782). The Zierikzee Herbarium was recently described and analysed in detail by Offerhaus et al. (2021). It is hypothesised that the Zierikzee Herbarium is part of a herbarium made by Professor Martinus Wilhelmus Schwencke (1707–1785) and was used during his lectures for future pharmacists in his botanical garden in The Hague in the 1750s, and auctioned in Leiden in 1785. The presence in the Zierikzee Herbarium of a virtually complete set of medicinal plants mentioned in the ‘Pharmacopoea Hagana’ (Anonymous 1738) eventually led to the conclusion that these could not have been assembled before 1730. Based on the printed ornaments that are used to mount the plants in these, and the major Dutch herbaria of the 18th century, I argue that the plants in the Zierikzee Herbarium and the herbarium of D’Oignies were remounted at a later date. The hypothesis by Offerhaus et al. (2021: 12) that the Zierikzee Herbarium was started between 1710 and 1720 is rejected. Arguments are given why it is unlikely that the Zierikzee Herbarium, as is suggested by Offerhaus et al. (2021: 12), is the herbarium of the head gardener of the Leiden botanic garden, Jacob Ligtvoet (1684–1752) and was auctioned in 1752.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; 18th century Dutch herbaria ; Jacob Ligtvoet ; Pharmacopoea Hagana ; printed herbarium ornaments ; Martinus Wilhelmus Schwencke
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  • 85
    Publication Date: 2024-05-08
    Description: Novel species of fungi described in this study include those from various countries as follows: Antarctica, Cladosporium arenosum from marine sediment sand. Argentina, Kosmimatamyces alatophylus (incl. Kosmimatamyces gen. nov.) from soil. Australia, Aspergillus banksianus, Aspergillus kumbius, Aspergillus luteorubrus, Aspergillus malvicolor and Aspergillus nanangensis from soil, Erysiphe medicaginis from leaves of Medicago polymorpha, Hymenotorrendiella communis on leaf litter of Eucalyptus bicostata, Lactifluus albopicri and Lactifluus austropiperatus on soil, Macalpinomyces collinsiae on Eriachne benthamii, Marasmius vagus on soil, Microdochium dawsoniorum from leaves of Sporobolus natalensis, Neopestalotiopsis nebuloides from leaves of Sporobolus elongatus, Pestalotiopsis etonensis from leaves of Sporobolus jacquemontii, Phytophthora personensis from soil associated with dying Grevillea mccutcheonii. Brazil, Aspergillus oxumiae from soil, Calvatia baixaverdensis on soil, Geastrum calycicoriaceum on leaf litter, Greeneria kielmeyerae on leaf spots of Kielmeyera coriacea. Chile, Phytophthora aysenensis on collar rot and stem of Aristotelia chilensis. Croatia, Mollisia gibbospora on fallen branch of Fagus sylvatica. Czech Republic, Neosetophoma hnaniceana from Buxus sempervirens. Ecuador, Exophiala frigidotolerans from soil. Estonia, Elaphomyces bucholtzii in soil. France, Venturia paralias from leaves of Euphorbia paralias. India, Cortinarius balteatoindicus and Cortinarius ulkhagarhiensis on leaf litter. Indonesia, Hymenotorrendiella indonesiana on Eucalyptus urophylla leaf litter. Italy, Penicillium taurinense from indoor chestnut mill. Malaysia, Hemileucoglossum kelabitense on soil, Satchmopsis pini on dead needles of Pinus tecunumanii. Poland, Lecanicillium praecognitum on insects’ frass. Portugal, Neodevriesia aestuarina from saline water. Republic of Korea, Gongronella namwonensis from freshwater. Russia, Candida pellucida from Exomias pellucidus, Heterocephalacria septentrionalis as endophyte from Cladonia rangiferina, Vishniacozyma phoenicis from dates fruit, Volvariella paludosa from swamp. Slovenia, Mallocybe crassivelata on soil. South Africa, Beltraniella podocarpi, Hamatocanthoscypha podocarpi, Coleophoma podocarpi and Nothoseiridium podocarpi (incl. Nothoseiridium gen. nov.) from leaves of Podocarpus latifolius, Gyrothrix encephalarti from leaves of Encephalartos sp., Paraphyton cutaneum from skin of human patient, Phacidiella alsophilae from leaves of Alsophila capensis, and Satchmopsis metrosideri on leaf litter of Metrosideros excelsa. Spain, Cladophialophora cabanerensis from soil, Cortinarius paezii on soil, Cylindrium magnoliae from leaves of Magnolia grandiflora, Trichophoma cylindrospora (incl. Trichophoma gen. nov.) from plant debris, Tuber alcaracense in calcareus soil, Tuber buendiae in calcareus soil. Thailand, Annulohypoxylon spougei on corticated wood, Poaceascoma filiforme from leaves of unknown Poaceae. UK, Dendrostoma luteum on branch lesions of Castanea sativa, Ypsilina buttingtonensis from heartwood of Quercus sp. Ukraine, Myrmecridium phragmiticola from leaves of Phragmites australis. USA, Absidia pararepens from air, Juncomyces californiensis (incl. Juncomyces gen. nov.) from leaves of Juncus effusus, Montagnula cylindrospora from a human skin sample, Muriphila oklahomaensis (incl. Muriphila gen. nov.) on outside wall of alcohol distillery, Neofabraea eucalyptorum from leaves of Eucalyptus macrandra, Diabolocovidia claustri (incl. Diabolocovidia gen. nov.) from leaves of Serenoa repens, Paecilomyces penicilliformis from air, Pseudopezicula betulae from leaves of leaf spots of Populus tremuloides. Vietnam, Diaporthe durionigena on branches of Durio zibethinus and Roridomyces pseudoirritans on rotten wood. Morphological and culture characteristics are supported by DNA barcodes.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; ITS nrDNA barcodes ; LSU ; new taxa ; systematics
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  • 86
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 45, pp. 177-195
    Publication Date: 2024-05-08
    Description: The red turpentine beetle (RTB; Dendroctonus valens) is a bark beetle that is native to Central and North America. This insect is well-known to live in association with a large number of Ophiostomatalean fungi. The beetle is considered a minor pest in its native range, but has killed millions of indigenous pine trees in China after its appearance in that country in the late 1990s. In order to increase the base of knowledge regarding the RTB and its symbionts, surveys of the beetle’s fungal associates were initially undertaken in China, and in a subsequent study in its native range in NorthAmerica.Atotal of 30 Ophiostomatalean species that included several undescribed taxa, were identified in these surveys. In the present study, seven of the undescribed taxa collected during the surveys were further characterised based on their morphological characteristics and multi-gene phylogenies. We proceeded to describe five of these as novel Leptographium spp. and two as new species of Ophiostoma. Four of the Leptographium spp. resided in the G. galeiformis-species complex, while one formed part of the L. olivaceumspecies complex. One Ophiostoma sp. was a member of the O. ips-species complex, while the only new species from China was closely related to O. floccosum. Two of the previously undescribed taxa from North America were shown to be congeneric with L. terebrantis, implying that this species was most often isolated in association with the RTB in North America. The undescribed taxon from North America was identified as O. ips, and like L. terebrantis, this species was also not recognized during the initial North American survey. Resolving the identities of these taxa provides essential baseline information to better understand the movement of fungal pathogens with this beetle. This then enhances our ability to accurately assess and predict the risks of invasions by these and related fungi.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; invasion biology ; phylogenetics ; Scolytinae ; seven new taxa ; taxonomy
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  • 87
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 65 no. 3, pp. 179-187
    Publication Date: 2024-05-25
    Description: During the preparation of the accounts of Artabotrys (Annonaceae) and Magnolia (Magnoliaceae) for the Flora of Singapore, the types of all relevant names were evaluated. New lectotypes are designated for A. suaveolens and M. maingayi and a second-step lectotypification is performed for M. elegans. The citation of a lectotype locality is corrected for A. costatus and the citation of an isolectotype is improved for A. maingayi. We also clarify the previous use of the term ‘type’ to designate specimens that are in fact lectotypes for several names in Magnolia.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Annonaceae ; Artabotrys ; lectotypification ; Magnoliaceae ; nomenclature ; Singapore
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  • 88
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 65 no. 1, pp. 90-93
    Publication Date: 2024-06-13
    Description: Orchidantha anthracina (Lowiaceae), discovered at the south central coast of Vietnam, is described and illustrated, bringing the total number of species in the family to 26, of which four occur in Vietnam. The notes on distribution, habitat and etymology are given and a preliminary conservation assessment is provided. The species is compared with O. vietnamica, with which it shares flowers of similar size and colours, but from which it is readily distinguished by a narrow and strongly reflexed dorsal sepal and spreading lateral sepals, not supporting the labellum. Notes with additional comparisons to all species with a similar arrangement of lateral sepals are also provided.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Orchidantha grandiflora ; Orchidantha inouei ; Orchidantha vietnamica ; Phú Yên province ; south central coast of Vietnam ; vulnerable ; Zingiberales
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  • 89
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 66 no. 1, pp. 82-92
    Publication Date: 2024-06-14
    Description: The original set of botanical collections of the agronomist H.A. Homblé is conserved in the herbarium BR. Homblé was one of the first collectors (1911–1913) for the flora of Katanga, Democratic Republic of the Congo. Many Homblé specimens were described as taxonomic novelties; 107 tropical African plant species are named after him. Before his colonial career in Katanga, Homblé stayed about two years (1909–1911) in Guangxi, China. His incompletely labelled Chinese collections were erroneously considered as collected in Katanga. This supposed African origin has led to confusion with regard to the identification, and even resulted in the description of four species believed to be new for science. This paper presents and discusses Homblé’s collection made in Guangxi, and the assumed novelties in it. Drosera insolita is a synonym of the Asian Drosera lunata, widespread from India to Australia. Three other species are new synonyms. Caesalpinia homblei is a synonym of the pantropical Caesalpinia bonduc. Digitaria polybotryoides is a synonym of Digitaria abludens, a widespread species in tropical Asia. Grewia katangensis is the only species that proved to be synonymous with an endemic species, Grewia cuspidatoserrata, only known from S Yunnan, and here reported as a new record for Guangxi. Lysimachia candida and Impatiens chinensis should be deleted from the list of the Congo Flora. The importance of careful specimen labelling and label interpretation is discussed.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics
    Repository Name: National Museum of Natural History, Netherlands
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  • 90
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 65 no. 2, pp. 102-103
    Publication Date: 2024-06-06
    Description: A new species of Freycinetia (Pandanaceae; Freycinetoideae) from Llavac, Quezon Province in Luzon Island, the Philippines, is proposed here, namely Freycinetia nonatoi. Freycinetia nonatoi is characterized by a lobed auricle of the sheath with conspicuous spines on the margins and bright yellow bracts. These three morphological features distinguish it from the nearest species, F. sumatrana. The discovery of F. nonatoi also marks the first record of a member of the section Auriculifoliae with spiny margins.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Auriculifoliae ; Freycinetia ; Luzon ; Pandanaceae ; Philippines ; Quezon
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  • 91
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 65 no. 3, pp. 212-218
    Publication Date: 2024-06-06
    Description: Pterichis comprises about 40 species distributed from Costa Rica in the north to Bolivia in the south. The species grow as terrestrial plants usually in paramo and subparamo, but there are also reports of populations in high montane forest. In this paper the complete enumeration of the six Bolivian representatives of the orchid genus Pterichis sect. Pterichis is presented.A total of four new species are described and one new record, P. aragogiana, for the country is reported. An updated key to the species of the nominal section of Pterichis from Bolivia is presented.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Andes ; biodiversity ; Neotropics ; new record for Bolivia ; Pterichis aragogiana ; Pterichis fuentesii ; Pterichis lunatilabia ; Pterichis obcordatilabia ; Pterichis vasquezii
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  • 92
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 65 no. 2, pp. i-ix
    Publication Date: 2024-06-17
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics
    Repository Name: National Museum of Natural History, Netherlands
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  • 93
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 65 no. 1, pp. 53-60
    Publication Date: 2024-06-15
    Description: Identification keys are provided to the different families in which the Euphorbiaceae are split after APG IV. Presently, Euphorbiaceae in the strict sense, Pandaceae, Peraceae, Phyllanthaceae, Picrodendraceae and Putranjivaceae are distinguished as distinct families. Within the families, keys to the different genera occurring in the Malesian area, native and introduced, are presented. The keys are to be tested and responses are very welcome.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Euphorbiaceae ; keys ; Pandaceae ; Peraceae ; Phyllanthaceae ; Picrodendraceae ; Putranjivaceae
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  • 94
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 65 no. 1, pp. 1-9
    Publication Date: 2024-06-16
    Description: The number of named Philippine species of the genus Amorphophallus (Araceae-Thomsonieae) amounts to 13 today. Three existing species names (not included in this count) cannot be attributed to presently recognized species for lack of their holotypes, which were all destroyed in WWII. Five new species are described here and an identification key to all species recognized from the Philippines is presented.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Amorphophallus ; Araceae ; identification key ; new species ; Philippines ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 95
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 65 no. 1, pp. 10-11
    Publication Date: 2024-06-19
    Description: Impatiens marroninus Utami (Balsaminaceae), collected from Sumatra, Indonesia, is described and illustrated as a new species. The species belongs to subg. Impatiens sect. Kathetophyllon. It is characterized by opposite or whorled leaves, yellow flowers with red maroon stripes in the upper part of the two lateral petals, dark green leaves and the lower sepal deeply navicular and constricted into a short curved spur. This combination of morphological characters was previously unknown. Detailed description, illustration, phenology, IUCN conservation assessment and ecology of the species are provided.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Balsaminaceae ; endemic ; Impatiens ; Indonesia ; new species ; taxonomy
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  • 96
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 65 no. 3, pp. 233-243
    Publication Date: 2024-06-19
    Description: In India, knowledge of the geographic distribution of Trichosanthes species is inadequate, largely due to the lack of revisionary work. Based on field observations, collected specimens and data from herbarium specimens, this paper describes a new taxon – T. dunniana subsp. clarkei from Sikkim and northern hill districts of West Bengal in northeastern India; and presents the first confirmed records of three southeast Asian taxa, viz., T. dunniana subsp. dunniana and T. wallichiana subsp. subrosea from northeastern India, and T. tricuspidata from the Andaman & Nicobar Islands. The name T. khasiana has been lectotypified, and Indochinese T. inthanonensis has been reduced under it. The southern Chinese Trichosanthes subrosea is transferred at reduced rank as T. wallichiana subsp. subrosea, while T. tridentata has been reduced to synonymy of this subspecies. Furthermore, we provide an updated distribution map with confirmed occurrences of these taxa in India, critical taxonomic notes and additional taxonomic characters.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; distribution ranges ; India ; Trichosanthes dunniana ; subsp. clarkei ; Trichosanthes khasiana ; Trichosanthes tricuspidata ; Trichosanthes wallichiana ; subsp. subrosea
    Repository Name: National Museum of Natural History, Netherlands
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  • 97
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 65 no. 1, pp. 75-82
    Publication Date: 2024-06-20
    Description: In Peninsular Malaysia, Rafflesia is represented by seven species of which R. kerrii (and R. su-meiae) stands out distinctly from the other five. The other five species, R. azlanii, R. cantleyi, R. parvimaculata, R. sharifahhapsahiae and R. tuanku-halimii, are collectively close enough to each other to be referred to as the R. cantleyi complex after its first-described species, R. cantleyi. Pulau Tioman has a population of R. cantleyi, which, because of its island location, is isolated from the mainland complex. This study was conducted to determine morphological variation in a selected location in Pulau Tioman. Twelve flowers were studied with respect to characteristics such as wart (blotch) pattern on perianth lobes, warts (dots) on upper surface of the diaphragm, shape of the aperture, shape of processes and types of ramenta. These are the characters that have been used to define species in the R. cantleyi complex. The variation in the local Tioman population was compared with the variation in the R. cantleyi complex on the mainland, which is about the same magnitude. This supports the idea that R. cantleyi is a single highly polymorphic species and that the species that have been described in the R. cantleyi complex should be reduced to varieties.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; morphology ; Pulau Tioman ; Rafflesia cantleyi complex ; variability
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  • 98
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 65 no. 2, pp. 167-175
    Publication Date: 2024-06-20
    Description: A revision of Dehaasia (Lauraceae) in Sumatra is presented. Eight species are recognized, including two newly described species (D. bandaharense and D. pilosa). Akey to the eight species, descriptions and distribution maps of each species and illustrations of newly described species are provided. A neotype for D. incrassata is designated.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Dehaasia ; Lauraceae ; revision ; Sumatra ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 99
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    Unknown
    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 65 no. 2, pp. 107-120
    Publication Date: 2024-06-20
    Description: Pelliciera is a genus of mangrove trees with distinct showy flowers with five petals subtended by two large foliaceous bracts. The genus, thought to be monotypic, only containing P. rhizophorae, was classified recently in the small diverse family, the Tetrameristaceae. This distinctive genus occurs in a relatively restricted distribution in Central and northern South America in the Atlantic-East Pacific region. In this recent decade, two varietal forms have been reported across its range, of which one appears to be a colour morph referred to much earlier as P. rhizophorae var. benthamii. The taxonomic status of the earlier morph was, however, insufficient to warrant individual recognition at the time, so the genus remained monotypic with no varietal forms. The aim of this treatment has been to review the systematic history of the genus, to thoroughly re-assess available observations and to re-evaluate the current taxonomic status. In conclusion, the genus is recognised now as having two closely related species, described here as P. benthamii along with a redefined P. rhizophorae. Characters such as leafy bract colour, leaf dentition and petal shape used in their discrimination are provided, along with notes on the ecology, phenology, a diagnostic key, and a revised distribution map that displays the oddly overlapping occurrences.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Atlantic-East Pacific ; Central America ; conservation ; mangrove ; morphometrics ; nectar ; Pelliciera benthamii ; Pelliciera rhizophorae ; phenology ; pollen ; South America ; Tetrameristaceae
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 100
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    Unknown
    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 65 no. 2, pp. 104-106
    Publication Date: 2024-06-20
    Description: Timonius eremiticus, a new species from Mount Pulgar, Palawan Island, the Philippines, is here described and illustrated. It is morphologically close to T. flavescens but is characterized by membranous to chartaceous leaves with 2–4 pairs of lateral nerves, ivory-white corolla, bracteate staminate inflorescences bearing bracteolate flowers, 5-petaled pistillate flowers, (sub)globose fruits that are round and not 4-angled, and pyrenes being obliquely radiated in cross-section of fruits. Timonius eremiticus is assessed as Critically Endangered following IUCN criteria. Buod (Wikang Filipino)   Inilarawan at iginuhit sa lathalaing ito ang Timonius eremiticus na isang bagong espesye ng halaman na matatagapuan sa Bundok Pulgar sa pulo ng Palawan sa Pilipinas. Ito ay kawangis ng T. flavescens subalit natatangi dahil sa mga malalamad o malapapel nitong mga dahon na may dalawa o hanggang apat na pares ng nerbiyong lateral, kulay garing na mga talulot, brakteadong istaminate na mga inflorescence at bulaklak, mga pistiladong bulaklak na may limang talulot, (mala)bilugang mga bunga na hindi nakalundo sa apat, at mga pyrene na oblikong naka-radiate sa pahalang na hati ng mga bunga. Ang Timonius eremiticus ay itinataya rin na lubos nang nanganganib na maubos alinsunod sa mga pamantayan ng IUCN.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; endemic ; Guettardeae ; Mount Pulgar ; Palawan ; Rubiaceae ; Timonius
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
    Format: application/pdf
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