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  • Articles  (96)
  • RFLP  (49)
  • photosynthesis  (47)
  • Springer  (96)
  • 1995-1999  (96)
  • 1998  (96)
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  • Articles  (96)
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  • 1995-1999  (96)
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  • 1
    Electronic Resource
    Electronic Resource
    Ultrastructural and molecular study of plastid inheritance in Abies alba and some Abies hybrids (1998)
    Springer
    Sexual plant reproduction 11 (1998), S. 284-291 
    Details
    ISSN: 1432-2145
    Keywords: Key words Abies ; Egg cell ; Plastid inheritance ; RFLP ; Ultrastructure
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  The ultrastructure of egg cells in Abies alba was examined to elucidate the lack of maternal inheritance of plastids. Before fertilization, maternal plastids are absent in the perinuclar zone containing mainly mitochondria and smooth endoplasmic reticulum. During egg cell development the maternal plastids are transformed into large inclusions which are situated mostly towards the periphery of the egg cell, and finally disintegrate. As a consequence, they do not participate in zygote formation. RFLP analysis of cpDNA of parental trees and their F1 interspecific hybrids (A. alba×A. numidica, A. alba×A. nordmanniana, A. nordmanniana×A. Alba) using HindIII and BamHI showed a paternal mode of cpDNA inheritance. Paternal inheritance has also been found with PCR/RFLP analysis of cpDNA from parental trees and their hybrids (A. alba×A. pinsapo, A. pinsapo×A. alba, A. pinsapo×A. numidica) using ApaI and HaeIII digests, as well as in the crosses of A. cephalonica×A. nordmanniana, A. nordmanniana×A. cephalonica, A. cephalonica×A. numidica using TagI digests.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/s004970050155
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  • 2
    Electronic Resource
    Electronic Resource
    Construction of RFLP-based maps of foxtail millet, Setaria italica (L.) P. Beauv. (1998)
    Springer
    Theoretical and applied genetics 96 (1998), S. 31-36 
    Details
    ISSN: 1432-2242
    Keywords: Key words Foxtail millet ; Genetic map ; Primary trisomics ; RFLP ; Setaria italica ; Setaria viridis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  An RFLP-based map consisting of 160 loci was constructed in an intervarietal cross of foxtail millet [Setaria italica (L.) P. Beauv.], Longgu 25×Pagoda Flower Green. The map comprises nine linkage groups, which were aligned with the nine foxtail millet chromosomes using trisomic lines, and spans 964 cM. The intraspecific map was compared to an interspecific map, constructed in a S. italica×S. viridis cross. Both the order of the markers and the genetic distances between the loci were highly conserved. Deviations from the expected 1 : 2 : 1 Mendelian segregation ratios were observed in both the intra- and inter-specific populations. The segregation data indicate that chromosome VIII in the Longgu 25×Pagoda Flower Green cross carries a gene that strongly affects gamete fertility.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/s001220050705
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  • 3
    Electronic Resource
    Electronic Resource
    Organization of an Arabidopsis thaliana gene cluster on chromosome 4 including the RPS2 gene, in the Brassica nigra genome (1998)
    Springer
    Theoretical and applied genetics 96 (1998), S. 468-474 
    Details
    ISSN: 1432-2242
    Keywords: Key words Microsynteny ; Genome ; Gene cluster ; RFLP ; PFGE
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Genetic and physical maps, consisting of a large number of DNA markers for Arabidopsis thaliana chromosomes, represent excellent tools to determine the organization of related genomes such as those of Brassica. In this paper we report the chromosomal localization and physical analysis by pulsed-field gel electrophoresis (PFGE) of a well-defined gene complex of A. thaliana in the Brassica nigra genome (B genome n=8). This complex is approximately 30 kb in length in A. thaliana and contains a cluster of six genes including ABI1 (ABA-responsive), RPS2 (resistance against Pseudomonas syringae, a bacterial disease), CK1 (casein kinase I), NAP (nucleosome-assembly protein), X9 and X14 (both of unknown function). The Arabidopsis chromosomal complex was found to be duplicated and conserved in gene number at different levels in the Brassica genome. Linkage group B1 had the most-conserved arrangement carrying all six genes tightly linked. Group B4 had an almost complete complex except for the absence of RPS2. Other partial complexes of fewer members were found on three other chromosomes. Our studies demonstrate that by this approach it is possible to identify ancestrally related chromosome segments in a complex and duplicated genome, such as the genome of B. nigra, permitting one to draw conclusions as to its origin and evolution.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/s001220050763
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  • 4
    Electronic Resource
    Electronic Resource
    Phylogenetic relationships within the genus Citrus (Rutaceae) and related genera as revealed by RFLP and RAPD analysis (1998)
    Springer
    Theoretical and applied genetics 96 (1998), S. 812-822 
    Details
    ISSN: 1432-2242
    Keywords: Key words Citrus ; RFLP ; RAPD ; Phylogeny ; Taxonomy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Relationships among 88 accessions representing 45 Citrus species, three man-made hybrids, and six related genera were examined for restriction fragment length polymorphisms (RFLP). Thirty-two Citrus and three Microcitrus accessions were also examined by random amplified polymorphic DNA (RAPD) analysis. A measure of relative heterozygosity was estimated based on the mean of the number of fragments per individual per probe-enzyme combination (PEC) divided by total number of fragments per PEC for all non-hybrid Citrus individuals. The presence in a Citrus species of a rare band found also in a related genus was taken as an indication of possible introgression, while the presence of several fragments unique to 1 species was used to indicate non-involvement of that species in hybridization events. Most species that have been described in the literature as hybrids had high heterozygosity indices and no unique fragments. Distance matrices and dendrograms were generated using simple matching coefficient and neighbor-joining cluster analysis. RFLP and RAPD data gave approximately the same results. These data showed C. maxima was affiliated with the papedas C. hongheensis and C. latipes. C. medica clustered with C. indica when only non-hybrid taxa were examined, or among limes, lemons, and relatives when all species were considered. Mandarins did not show strongly supported groupings among themselves, nor with other species. These data showed that several accessions were probably assigned to the wrong species.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/s001220050807
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  • 5
    Electronic Resource
    Electronic Resource
    Mapping of the gene Nxphu that controls hypersensitive resistance to potato virus X in Solanum phureja IvP35 (1998)
    Springer
    Theoretical and applied genetics 96 (1998), S. 840-843 
    Details
    ISSN: 1432-2242
    Keywords: Key words Potato virus X ; Resistance gene ; Genetic mapping ; RFLP ; Solanaceae
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  The line IvP35 of the diploid (2n=2x=24) cultivated potato species Solanum phureja (family Solanaceae) expresses hypersensitive resistance (H) to potato X potexvirus (PVX). In this study, a diploid potato population was produced using IvP35 as the male parent and a diploid line of S. tuberosum (87HW13.7) as the female parent and tested for resistance to PVX. Data indicated that H to PVX in IvP35 is a dominant, monogenically inherited trait controlled by a single gene, named Nx phu , that is in a simplex condition (Nxnx). RFLP analysis carried out on the progeny lines revealed 4 markers (CT220, TG328, CT112 and TG424) from the long arm of chromosome IX that were linked to the hypersensitive phenotype; the closest linkage was observed with the marker TG424. Previous authors have shown that the same region of chromosome IX contains the gene Sw-5 for resistance to tomato spotted wilt tospovirus in Lycopersicon peruvianum (Solanaceae).
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/s001220050810
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  • 6
    Electronic Resource
    Electronic Resource
    RFLP analysis and genomic in situ hybridization (GISH) in somatic hybrids and their progeny between Lycopersicon esculentum and Solanum lycopersicoides (1998)
    Springer
    Theoretical and applied genetics 96 (1998), S. 719-726 
    Details
    ISSN: 1432-2242
    Keywords: Key words Tomato and Solanum lycopersicoides intergeneric hybrid ; Chloroplast DNA ; Nuclear genome ; RFLP ; GISH
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  RFLP (restriction fragment length polymorphism) and GISH (genomic in situ hybridization) analyses were employed to identify the chloroplast and nuclear genomes of the somatic hybrids and progeny between tomato ‘Ohgata zuiko’ and Solanum lycopersicoides (‘LA 2386’). A random distribution of the chloroplast genotype was determined using a cloned 19.6-kb BamHI fragment (Ba1) of tobacco chloroplast DNA. Eight selected hybrids were analyzed for their chromosomal compositions; 4 were tetraploids (2n=48) with an equal number of chromosomes derived from each parent as accurately determined by GISH, and the other 4 were hexaploids, containing an average of two sets of tomato chromosomes and one set from the wild parent. RFLP analysis with six tomato nuclear probes of known chromosomal locations revealed no major variation among the 44 hybrid plants surveyed. However, it also showed the presence of both parent-specific alleles and the loss of some and the presence of a few non-parental alleles, indicating rearrangement and/or recombination of the nuclear DNA. The relevance of the molecular and cytological methods and the potential use of somatic hybrids for plant breeding are demonstrated.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/s001220050794
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  • 7
    Electronic Resource
    Electronic Resource
    Genetic basis of resistance to sugarcane mosaic virus in European maize germplasm (1998)
    Springer
    Theoretical and applied genetics 96 (1998), S. 1151-1161 
    Details
    ISSN: 1432-2242
    Keywords: Key words European maize ; Zea mays ; Sugarcane mosaic virus ; Disease resistance ; RFLP
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Sugarcane mosaic virus (SCMV) causes considerable damage to maize (Zea mays L.) in Europe. The objective of the present study was to determine the genetic basis of resistance to SCMV in European maize germplasm and to compare it with that of U.S. inbred Pa405. Three resistant European inbreds D21, D32, and FAP1360A were crossed with four susceptible inbreds F7, KW1292, D408, and D145 to produce four F2 populations and three backcrosses to the susceptible parent. Screening for SCMV resistance in parental inbreds and segregating generations was done in two field trials as well as under greenhouse conditions. RFLP markers umc85, bnl6.29, umc10, umc44, and SSR marker phi075 were used in F2 populations or F3 lines to locate the resistance gene(s) in the maize genome. Segregation in the F2 and backcross generations fitted to different gene models depending on the environmental conditions and the genotype of the susceptible parent. In the field tests, resistance in the three resistant European inbreds seems to be controlled by two to three genes. Under greenhouse conditions, susceptibility to SCMV in D32 appears to be governed by one dominant and one recessive gene. Allelism tests indicated the presence of a common dominant gene (denoted as Scm1) in all three resistant European inbreds and Pa405. Marker analyses mapped two dominant genes: Scm1 on chromosome 6S and Scm2 on chromosome 3.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/s001220050851
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  • 8
    Electronic Resource
    Electronic Resource
    Characterisation of the radish introgression carrying the Rfo restorer gene for the Ogu-INRA cytoplasmic male sterility in rapeseed (Brassica napus L.) (1998)
    Springer
    Theoretical and applied genetics 97 (1998), S. 129-134 
    Details
    ISSN: 1432-2242
    Keywords: Key words Brassica napus ; Raphanus sativus ; Restorer gene ; Introgression ; RFLP ; RAPD ; Genetic mapping
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Bulked segregant analysis and comparative mapping were applied to identify molecular markers linked to the Rfo restorer gene used for the Ogu-INRA cytoplasmic male-sterility system in rapeseed. These markers were then used to localise the radish introgression on the B. napus genetic map constructed from the cross ‘Darmor.bzh’ x ’Yudal’. The introgression mapped on the DY15 linkage group. From the comparison of this latter group to the linkage group constructed on a F2 progeny segregating for the radish introgression, it was concluded that the introgression had occurred through homoeologous recombination, that it was not distal and that it had replaced a B. napus region of around 50 cM. A QTL involved in aliphatic seed glucosinolate content was located on the DY15 linkage group at a position corresponding to one end of the introgression. The DNA markers identified in this study are being used in map-based cloning of the Rfo gene and in marker-assisted selection.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/s001220050876
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  • 9
    Electronic Resource
    Electronic Resource
    Mapping of three self-fertility mutations in rye (Secale cereale L.) using RFLP, isozyme and morphological markers (1998)
    Springer
    Theoretical and applied genetics 97 (1998), S. 147-153 
    Details
    ISSN: 1432-2242
    Keywords: Key words Genetic mapping ; Isozyme ; RFLP ; Secale cereale L. ; Self-fertility
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Three mutations determining self-fertility at the S, Z and S5 self-incompatibility loci on chromosomes 1R, 2R and 5R of rye, respectively, were mapped using three different F2 populations. There was a close linkage of one isozyme and four RFLP markers, and no recombinant plants were detected. These markers are Prx7, Xiag249 and Xpsr634 for the S locus (1R), Xbcd266 for the Z locus (2R) and Xpsr100 for the S5 locus (5R). Linkage data for markers associated to the self-fertility mutations at the S, Z and S5 loci were calculated and compared with genetic maps computed by MAPMAKER multipoint analysis.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/s001220050879
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  • 10
    Electronic Resource
    Electronic Resource
    Codominant PCR-based markers for Pinus taeda developed from mapped cDNA clones (1998)
    Springer
    Theoretical and applied genetics 97 (1998), S. 327-336 
    Details
    ISSN: 1432-2242
    Keywords: Key words STS ; Codominant PCR marker ; RFLP ; Loblolly pine (Pinus taeda L.) ; Comparative map
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  We report a strategy for developing codominant PCR-based genetic markers by using sequenced cDNA clones from loblolly pine (Pinus taeda L.). These clones were previously used as probes for detecting restriction fragment length polymorphisms (RFLPs) to generate linkage maps. After assessing the complexity of banding patterns from Southern blots, we selected clones representing relatively simple gene families, and then determined nucleotide sequences for about 200 bp at each end of the cDNA inserts. Specific PCR primers were designed to amplify samples of genomic DNA derived from two loblolly pine mapping populations. Polymorphisms were detected after digesting the amplified DNA fragments with a battery of restriction endonucleases, and most polymorphisms were inherited in a Mendelian fashion. These newly identified genetic markers are codominant and relatively simple to use. By assaying DNA from individuals used to construct RFLP maps, we show that most of these markers map to the same position as the RFLP loci detected using their corresponding cDNAs as probes, implying that these markers have been converted from RFLP to PCR-based methods. These PCR-based markers will be useful for genome mapping and population genetics.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/s001220050903
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  • 11
    Electronic Resource
    Electronic Resource
    Comparative QTL mapping of resistance to Ustilago maydis across four populations of European flint-maize (1998)
    Springer
    Theoretical and applied genetics 97 (1998), S. 1321-1330 
    Details
    ISSN: 1432-2242
    Keywords: Key words Maize ; Ustilago maydis ; QTL mapping ; RFLP ; Resistance
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  We mapped and characterized quantitative trait loci (QTLs) for resistance to Ustilago maydis and investigated their consistency across different flint-maize populations. Four independent populations, comprising 280 F3 lines (A×BI), 120 F5 lines (A×BII), 131 F4 lines (A×C) and 133 F4 lines (C×D), were produced from four European elite flint inbreds (A, B, C, D) and genotyped at 89, 151, 104, and 122 RFLP marker loci, respectively. All Fn lines were evaluated in field trials with two replications in five German environments. Genotypic variances were highly significant for the percentage of U. maydis infected plants (UST) in all populations, and heritabilities exceeded 0.69. Between five and ten QTLs were detected in individual populations by composite interval mapping, explaining between 39% and 58% of the phenotypic variance. These 19 different QTLs were distributed over all ten chromosomes without any clustering on certain chromosomes. In most cases, gene action was dominant or overdominant. Fourteen pairs of the detected QTLs for UST displayed significant digenic epistatic interactions, but only two of them did so after arcsin √UST/100 transformation. Significant QTL× environment interactions occurred frequently. Between two to four QTLs were common between pairs of populations. Population C×D was also grown in Chartres, a location with a high U. maydis incidence. Two out of six QTLs identified for Chartres were in common with QTLs detected across five German environments for C×D. Consequently, marker-assisted or phenotypic selection based on results from natural infection seem to be suitable breeding strategies for improving the resistance of maize to U. maydis.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/s001220051025
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  • 12
    Electronic Resource
    Electronic Resource
    Prediction of testcross means and variances among F3 progenies of F1 crosses from testcross means and genetic distances of their parents in maize (1998)
    Springer
    Theoretical and applied genetics 96 (1998), S. 503-512 
    Details
    ISSN: 1432-2242
    Keywords: Key words Zea mays L ; AFLP ; RFLP ; Testcross mean ; Testcross variance ; Genetic distance ; Midparent heterosis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Prediction of the means and genetic variances in segregating generations could help to assess the breeding potential of base populations. In this study, we investigated whether the testcross (TC) means and variances of F3 progenies from F1 crosses in European maize can be predicted from the TC means of their parents and F1 crosses and four measures of parental genetic divergence: genetic distance (GD) determined by 194 RFLP or 691 AFLPTM 1 markers, mid-parent heterosis (MPH), and absolute difference between the TC means of parents (∣P1−P2∣). The experimental materials comprised six sets of crosses; each set consisted of four elite inbreds from the flint or dent germplasm and the six possible F1 crosses between them, which were evaluated for mid-parent heterosis. Testcross progenies of these materials and 20 random F3 plants per F1 cross were produced with a single-cross tester from the opposite heterotic group and evaluated in two environments. The characters studied were plant height, dry matter content and grain yield. The genetic distance between parent lines ranged between 0.17 and 0.70 for RFLPs and between 0.14 and 0.57 for AFLPs in the six sets. Testcross-means of parents, F1 crosses, and F3 populations averaged across the six crosses in a particular set generally agreed well for all three traits. Bartlett’s test revealed heterogeneous TC variances among the six crosses in all sets for plant height, in four sets for grain yield and in five sets for dry matter content. Correlations among the TC means of the parents, F1 crosses, and F3 populations were highly significant and positive for all traits. Estimates of the TC variance among F3 progenies for the 36 crosses showed only low correlations with the four measures of parental genetic divergence for all traits. The results demonstrated that for our material, the TC means of the parents or the parental F1 cross can be used as predictors for the TC means of F3 populations. However, the prediction of the TC variance remains an unsolved problem.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/s001220050767
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  • 13
    Electronic Resource
    Electronic Resource
    Molecular phylogeny of mangroves V. Analysis of genome relationships in mangrove species using RAPD and RFLP markers (1998)
    Springer
    Theoretical and applied genetics 97 (1998), S. 617-625 
    Details
    ISSN: 1432-2242
    Keywords: Key words Mangroves ; Genome relationship ; Phylogeny ; RAPD ; RFLP
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  DNA from pooled leaf samples of 11 true major mangrove, three true minor mangrove, two mangrove associate, two mangrove parasite, three terrestrial and one cultivated species were isolated for the present study. In total, 198 random amplified polymorphic DNAs (RAPDs) and 180 restriction fragment length polymorphism (RFLP) loci were scored by using ten primers and 14 enzyme-probe combinations respectively. The polymorphism observed for these markers revealed a high degree of genetic diversity in mangroves at both inter-specific or inter-generic levels. A dendrogram, constructed after pooling both RAPD and RFLP data, using a similarity index was analysed for genome relationships among these species. The dendrogram showed clustering of all the major mangroves, except for Nypa fruticans (Arecaceae), into one group. All species under the tribe Rhizophorae formed a sub-cluster, to which Xylocarpus granatum was found to be the most closesly related species. The clustering pattern implied that Excoecaria agallocha and Acanthus ilicifolius should be considered as true minor mangroves. The present study also provided molecular data favouring the separation of Avicennia spp. from the Verbenaceae to create a monotypic family the Avicenniaceae. The separation of Viscum orientale into the Viscaceae was also favoured.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/s001220050937
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  • 14
    Electronic Resource
    Electronic Resource
    Molecular mapping of the photoperiod response gene ea7 in barley (1998)
    Springer
    Theoretical and applied genetics 97 (1998), S. 797-800 
    Details
    ISSN: 1432-2242
    Keywords: Key words Genetic mapping ; RFLP ; Flowering time ; Photoperiod response ; Barley
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  The gene ea 7 determining photoperiod insensitivity under short day length was mapped on the short arm of chromosome 6H near the centromere. The gene was linked to the two flanking markers Xmwg2264 and Xmwg916 by 6.7 and 13.0 cM, respectively. Compared to Ppd-H1 (chromosome 2H) and Ppd-H2 (chromosome 1H), ea 7 determines the strongest effect on flowering time with 55 and 18 days difference compared to photoperiod sensitive genotypes grown under short and long photoperiods, respectively. Allelic and homoeologous relationships to major genes and quantitative trait loci controlling flowering time in barley and wheat are discussed.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/s001220050958
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  • 15
    Electronic Resource
    Electronic Resource
    Molecular mapping of the py-1 gene for resistance to corky root rot (Pyrenochaeta lycopersici) in tomato (1998)
    Springer
    Theoretical and applied genetics 97 (1998), S. 784-788 
    Details
    ISSN: 1432-2242
    Keywords: Key words CAP ; py-1 ; RAPD ; RFLP ; Breeding
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  We report the molecular mapping of the py-1 gene for resistance to corky root rot [Pyrenochaeta lycopersici (Schneider and Gerlach)] in tomato using RAPD and RFLP marker analysis. DNA from near-isogenic lines (NILs) of tomato differing in corky root rot resistance was screened with 575 random oligonucleotide primers to detect polymorphic DNAs linked to py-1. Three primers (OPW-04, OPC-02, OPG-19) revealed polymorphisms between the NILs. Twelve resistant and eight susceptible DNA pools derived from segregating F3 families were used to confirm that the RAPD markers were linked to the py-1 gene. Two of the linked amplified fragments, corresponding to OPW-04 and OPC-02, were subsequently cloned and mapped on the tomato molecular linkage map as RFLPs. These clones were located between TG40 and CT31 on the short arm of chromosome 3. Further analysis with selected RFLP markers showed that 7% (8.8 cM) of chromosome 3 of the resistant line ‘Moboglan’ was introgressed from the L. peruvianum donor parent. Three RFLP markers (TG40, TG324, and TG479) from the introgressed part of chromosome 3 were converted to cleaved amplified polymorphism (CAP) markers for use in a polymerase chain reaction (PCR) assay. These PCR markers will allow rapid large-scale screening of tomato populations for corky root rot resistance.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/s001220050956
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  • 16
    Electronic Resource
    Electronic Resource
    Identification and physical mapping of three Haynaldia villosa chromosome-6V deletion lines (1998)
    Springer
    Theoretical and applied genetics 97 (1998), S. 1042-1046 
    Details
    ISSN: 1432-2242
    Keywords: Key words T. aestivum ; H. villosa ; C-banding ; RFLP ; Deletion mapping ; Pm21
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Three deletion lines (del6V?2S-1, del6V? 2L-1, and del6V?2L-2) of Haynaldia villosa chromosome 6V added to wheat were identified by C-banding and characterized by RFLP analyses. The breakpoints were located at fraction lengths (FL) 0.58 in del6V?2S-1 in the short arm, and FL 0.66 in del6V?2L-1 and FL 0.64 in del6V?2L-2 in the long arm. Thirty-one Triticeae homoeologous group-6 DNA probes were used to map RFLP loci in the deletion lines and the wheat-H. villosa disomic substitution (DS) line 6V?2(6A). Nine probes failed to detect polymorphism between Chinese Spring and DS6V?2(6A). Ten of sixteen polymorphic short-arm loci were not detected in del6V?2S-1. Thus, the loci are located in the deleted distal chromosome region. Six RFLP markers were mapped in the proximal 58% of 6VS. Of 20 DNA markers specific for 6VL, six mapped in the distal 36% of the long arm, and nine mapped in the proximal 64% of 6VL. The breakpoint of the short arm of 6V?2 occurs between Xpsr106 and Xcdo270, and that of the long arm between Xpsr915 and Xmwg934. The powdery mildew resistance gene Pm21 is located on the short arm of chromosome 6V?2. Pm21 is present in del6V?2S-1, and can be further mapped in the proximal 58% of 6V?2S.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/s001220050989
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  • 17
    Electronic Resource
    Electronic Resource
    The structure of the Aegilops tauschii genepool and the evolution of hexaploid wheat (1998)
    Springer
    Theoretical and applied genetics 97 (1998), S. 657-670 
    Details
    ISSN: 1432-2242
    Keywords: Key words Triticum aestivum ; Phylogeny ; Genetic distance ; Genome ; Introgression ; Allopolyploidy ; RFLP ; Glutenin ; rRNA ; Non-transcribed spacers ; Evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Polymorphism in the lengths of restriction fragments at 53 single-copy loci, the rRNA locus Nor3, and the high-molecular-weight glutenin locus Glu1 was investigated in the D genome of hexaploid Triticum aestivum and that of Aegilops tauschii, the source of the T. aestivum D genome. The distribution of genetic variation in Ae. tauschii suggests gene flow between Ae. tauschii ssp. strangulata and ssp. tauschii in Iran but less in Transcaucasia. The “strangulata” genepool is wider than it appears on the basis of morphology and includes ssp. strangulata in Transcaucasia and southeastern (SE) Caspian Iran and ssp. tauschii in north-central Iran and southwestern (SW) Caspian Iran. In the latter region, Ae. tauschii morphological varieties ‘meyeri’ and ‘typica’ are equidistant to ssp. strangulata in Transcaucasia, and both belong to the “strangulata” genepool. A model of the evolution of Ae. tauschii is presented. On the geographic region basis, the D genomes of all investigated forms of T. aestivum are most closely related to the “strangulata” genepool in Transcaucasia, Armenia in particular, and SW Caspian Iran. It is suggested that the principal area of the origin of T. aestivum is Armenia, but the SW coastal area of the Caspian Sea and a corridor between the two areas may have played a role as well. Little genetic differentiation was found among the D genomes of all investigated free-threshing and hulled forms of T. aestivum, and all appear to share a single D-genome genepool, in spite of the fact that several Ae. tauschii parents were involved in the evolution of T. aestivum.
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    URL: http://dx.doi.org/10.1007/s001220050942
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    A genetic linkage map of durum wheat (1998)
    Springer
    Theoretical and applied genetics 97 (1998), S. 721-728 
    Details
    ISSN: 1432-2242
    Keywords: Key words Durum wheat ; Mapping ; Linkage map ; RFLP ; Morphological markers
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  A genetic linkage map of tetraploid wheat [Triticum turgidum (L.) Thell.] was constructed using segregation data from a population of 65 recombinant inbred lines (RILs) derived from a cross between the durum wheat cultivar Messapia and accession MG4343 of T. turgidum (L.) Thell. ssp dicoccoides (Korn.) Thell. A total of 259 loci were analysed, including 244 restriction fragment length polymorphisms (RFLPs), one PCR (polymerase chain reaction) marker (a sequence coding for a LMW (low-molecular-weight) glutenin subunit gene located at the Glu-B3 locus), seven biochemical (six seed-storage protein loci and one isozyme locus) and seven morphological markers. A total of 213 loci were mapped at a LOD≥3 on all 14 chromosomes of the A and B genomes. The total length of the map is 1352 cM and the average distance between adjacent markers is 6.3 cM. Forty six loci could not be mapped at a LOD≥3. A fraction (18.6%) of the markers deviated significantly from the expected Mendelian ratios; clusters of loci showing distorted segregation were found on chromosomes 1B, 3AL, 4AL, 6AL and 7AL. The durum wheat map was compared with the published maps of bread wheat using several common RFLP markers and general features are discussed. The markers detected the known structural rearrangements involving chromosomes 4A, 5A and 7B as well as the translocation between 2B-6B, but not the deletion on 2BS. This map provides a useful tool for analysing and breeding economically important quantitative traits and for marker-assisted selection, as well as for studies of genome organisation in small grain cereal species.
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    URL: http://dx.doi.org/10.1007/s001220050948
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    QTLs conditioning early growth in a soybean population segregating for growth habit (1998)
    Springer
    Theoretical and applied genetics 97 (1998), S. 1210-1216 
    Details
    ISSN: 1432-2242
    Keywords: Key words Soybean ; Glycine max ; RFLP ; QTL ; Plant height ; Canopy width
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  There are both economic and environmental reasons for reducing the use of herbicides for weed control in soybean [Glycine max (L.) Merr.] fields. Optimizing crop competitiveness can reduce reliance on chemical weed control. Fast and vigorous early growth and rapid canopy development can be effective in suppressing weed infestation of crop plants. The purposes of this study were to identify and molecularly map the quantitative trait loci (QTLs) conditioning soybean plant height and canopy width during the early vegetative stages of soybean growth. A restriction fragment length polymorphism (RFLP) linkage map was created using 142 markers and 116 F2-derived lines from a cross of ‘S100’בTokyo’. The parents and the 116 F2-derived lines were evaluated in the greenhouse and in the field at Athens, Ga., in 1996 and 1997. Combined over environments, Tokyo averaged 41 and 17% taller plants than S100 at the V7 and V10 stages of development. Transgressive segregation was observed among the progeny at both stages. Based on single-factor analysis of variance (ANOVA), three and four independent RFLP loci were associated with plant height at the V7 and V10 stages, respectively. All three loci detected [on linkage groups (LGs) C2 and F, and unlinked] at the V7 stage were also detected at the V10 stage along with one additional independent locus on LG E. The Tokyo allele contributed to increased plant height at all loci except at the unlinked locus. Three QTLs (on LGs C2, E, and F) were consistent across environments, three (on LGs C2 and F, and unlinked) were consistent across stages of plant development, and two (on LGs C2 and F) were consistent both across environments and stages of plant development. Within each stage of development, there was no interaction among the independent loci, and the respective loci together explained most of the variation in the traits. Three independent RFLP loci were associated with canopy width at the V10 stage, of which one was unique to the trait, while the remaining loci (on LGs C2 and F) were in common with the independent loci for plant height. Canopy width had a strong correlation (r=0.87) with plant height at the V10 stage. However, mature plant height, lodging, or seed weight had no phenotypic or QTL association with early plant height or canopy width.
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    URL: http://dx.doi.org/10.1007/s001220051012
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    A consensus linkage map of rye (Secale cereale L.) including 374 RFLPs, 24 isozymes and 15 gene loci (1998)
    Springer
    Theoretical and applied genetics 97 (1998), S. 1279-1288 
    Details
    ISSN: 1432-2242
    Keywords: Key words Consensus map ; Isozymes ; RFLP ; Rye ; Secale cereale L.
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Consensus linkage maps were constructed for all seven rye chromosomes using 12 basic RFLP maps. The maps presented contain a total of 413 markers. The number of markers per chromosome varies from 41 (chromosome 3R) to 83 (chromosome 1R). In addition to 374 RFLP and 24 isozyme markers 15 gene loci were incorporated, determining the traits reduced plant height, self fertility, male sterility restoration, vernalization response, resistance against powdery mildew, chlorophyll deficiency, hairy leaf sheath, hairy peduncle, waxy endosperm, waxless plant and absence of ligules. The maps presented allow the selection of markers for the fine mapping of certain regions of the rye genome. In terms of the known chromosomal rearrangements within the Triticeae its utilization can also be extended for mapping in wheat and barley.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/s001220051020
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    Identification of molecular markers linked to quantitative trait loci for soybean resistance to corn earworm (1998)
    Springer
    Theoretical and applied genetics 96 (1998), S. 786-790 
    Details
    ISSN: 1432-2242
    Keywords: Key words Soybean ; Glycine max ; QTL ; RFLP ; Antixenosis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  One hundred and thirty nine restriction fragment length polymorphisms (RFLPs) were used to construct a soybean (Glycine max L. Merr.) genetic linkage map and to identify quantitative trait loci (QTLs) associated with resistance to corn earworm (Helicoverpa zea Boddie) in a population of 103 F2-derived lines from a cross of ‘Cobb’ (susceptible) and PI229358 (resistant). The genetic linkage map consisted of 128 markers which converged onto 30 linkage groups covering approximately 1325 cM. There were 11 unlinked markers. The F2-derived lines and the two parents were grown in the field under a plastic mesh cage near Athens, Ga., in 1995. The plants were artificially infested with corn earworm and evaluated for the amount of defoliation. Using interval-mapping analysis for linked markers and single-factor analysis of variance (ANOVA), markers were tested for an association with resistance. One major and two minor QTLs for resistance were identified in this population. The PI229358 allele contributed insect resistance at all three QTLs. The major QTL is linked to the RFLP marker A584 on linkage group (LG) ‘M’ of the USDA/Iowa State University public soybean genetic map. It accounts for 37% of the total variation for resistance in this cross. The minor QTLs are linked to the RFLP markers R249 (LG ‘H’) and Bng047 (LG ‘D1’). These markers explain 16% and 10% of variation, respectively. The heritability (h2) for resistance was estimated as 64% in this population.
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    URL: http://dx.doi.org/10.1007/s001220050803
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    Structural rearrangement in chromosome 2M of Aegilops comosa has prevented the utilization of the Compair and related wheat-Ae. comosa translocations in wheat improvement (1998)
    Springer
    Theoretical and applied genetics 96 (1998), S. 780-785 
    Details
    ISSN: 1432-2242
    Keywords: Key words Wheat ; Aegilops comosa ; Translocation ; Homoeologous recombination ; RFLP ; C-banding ; Genomic in situ hybridization
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  The genetic constitutions of chromosome 2M of Aegilops comosa and the derived wheat-Ae. comosa translocations were analyzed by molecular cytogenetic techniques. Hybridization of 15 RFLP markers covering the entire length of the group-2 chromosomes revealed that chromosome 2M was structurally rearranged compared to the homoeologous chromosomes of wheat by either a pericentric inversion or a terminal intrachromosomal translocation. The breakpoint of the rearrangement was located in a region between the loci Xpsr131 and Xcdo405, resulting in the translocation of 47% of 2MS to 2ML. This aberrant structure of 2M allowed homoeologous recombination between 2M and its wheat counterpart only in the translocated segment on 2ML. C-banding and genomic in situ hybridization analyses confirmed that all translocation chromosomes consisted of the complete 2MS arm, a large part of 2ML, and very small distal segments derived from 2AS or 2DS, as expected from the aberrant structure of chromosome 2M. Thus, the translocation in the line 2A-2M?4/2 can be described as T2AS-2M?1L ⋅ 2M?1S and the translocations in the lines Compair and 2D-2M?3/8 as T2DS-2M?1L ⋅ 2M?1S. RFLP analysis determined the breakpoints in these translocation chromosomes to be within the telomeric 16% of the wheat chromosome arms. The breakpoint of the 2A/2M translocation was between Xbcd348 and Xcdo783, and that of the 2D/2M translocation was between Xcdo783 and Xpsr666. Because the translocation chromosomes retain the structural aberration found in chromosome 2M, further exploitation of the wheat-Ae. comosa translocations for cultivar improvement is questionable.
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    URL: http://dx.doi.org/10.1007/s001220050802
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    Molecular examination of a chromosome region that controls resistance to potato Y and A potyviruses in potato (1998)
    Springer
    Theoretical and applied genetics 96 (1998), S. 1036-1043 
    Details
    ISSN: 1432-2242
    Keywords: Key words Potato virus A ; Potato virus Y ; Resistance gene ; RFLP ; Diploid potato
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  The gene Ry adg that confers resistance to potato Y potyvirus (PVY) in the cultivated potato [Solanum tuberosum subsp. andigena, line 2x(v-2)7] is located on chromosome XI in a segment that contains three other known resistance genes in other syntenic solanaceous species. One of them is the gene N that controls resistance to tobacco mosaic tobamovirus in tobacco and has previously been isolated and sequenced. Three sequence-related, resistance gene-like (RGL) DNA fragments (354–369 bp) highly homologous to the gene N were PCR-amplified from the potato line 2x(v-2)7. Two RGL fragments (79 and 81% homologous to the N gene) co-segregated with Ry adg among the 77 F1 progeny tested. These RGLs may originate from a resistance gene family on chromosome XI. The potato line 2x(v-2)7 also expressed resistance to potato A potyvirus (PVA), which was controlled by another locus on chromosome XI mapped ca. 6.8 cM distal to Ry adg .
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/s001220050836
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    Mapping loci associated with flour colour in wheat (Triticum aestivum L.) (1998)
    Springer
    Theoretical and applied genetics 97 (1998), S. 238-245 
    Details
    ISSN: 1432-2242
    Keywords: Key words Wheat ; Flour colour ; QTL mapping ; RFLP ; AFLP
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  An RFLP map constructed using 150 single seed descent (SSD) lines from a cross between two hexaploid wheat varieties (‘Schomburgk’בYarralinka’) was used to identify loci controlling flour colour. Flour colour data were obtained from field trials conducted over two seasons at different sites. The estimated heritability of this trait was calculated as 0.67. Two regions identified in the preliminary analysis on chromosomes 3A and 7A, accounted for 13% and 60% of the genetic variation respectively. A detailed analysis of the major locus on 7A was conducted through fine mapping of AFLP markers identified using bulked segregant analysis (BSA). Seven additional markers were identified by the BSA and mapped to the region of the 7A locus. The applicability of these markers to identify wheat lines with enhanced flour colour is discussed.
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    URL: http://dx.doi.org/10.1007/s001220050891
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    RFLP mapping of the centromere of chromosome 4 in maize using isochromosomes for 4S (1998)
    Springer
    Theoretical and applied genetics 96 (1998), S. 361-366 
    Details
    ISSN: 1432-2242
    Keywords: Key words Centromere ; Telocentric ; Secondary trisomic ; Maize ; RFLP
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  The centromere of maize chromosome 4 was previously localized to a 26-cM interval using molecular markers and B-A translocations. The objective of the present study was to refine the placement of the centromere using secondary trisomics. Two independently isolated secondary trisomics (having an isochromosome plus two normal homologs) for 4S were recovered. RFLP analysis of populations segregating for them placed the centromere of chromosome 4 between bnl15.45 and bnl7.20, two RFLP loci that are 5.4-cM apart on the UMC map and 11.5-cM apart on the BNL map.
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    URL: http://dx.doi.org/10.1007/s001220050749
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    RFLP tagging of QTLs conditioning specific leaf weight and leaf size in soybean (1998)
    Springer
    Theoretical and applied genetics 96 (1998), S. 354-360 
    Details
    ISSN: 1432-2242
    Keywords: Key words Soybean ; Glycine max ; QTL ; RFLP ; SLW ; Leaf size
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Selection for high specific leaf weight (SLW) in soybean [Glycine max (L) Merr.] may increase apparent photosynthetic rate per unit leaf area (AP), which in turn may improve seed yield. In general, the SLW and leaf size are negatively correlated in soybean. To maximize total photosynthetic performance, and perhaps the seed yield, of a soybean cultivar, it would be necessary to establish a large leaf area rapidly while maintaining a high SLW. The objective of the present study was to identify quantitative trait loci (QTLs) conditioning SLW and leaf size in soybean. One hundred and twenty F4-derived lines from a ‘Young’×PI416937 population were evaluated using restriction fragment length polymorphism (RFLP) markers. The genetic map consisted of 155 loci on 33 linkage groups (LGs) covering 973 cM of map distance. The phenotypic data were collected from two different environments – a greenhouse at Athens, Ga. and a field site at Windblow, N.C. The SLW and leaf-size measurements were made on leaves from the 8th and 9th node of soybean plants at the V12 stage of development. Combined over environments, six putative independent RFLP markers were associated with SLW, and four of these loci were consistent across environments. Individually, the six markers each explained between 8 and 18% of the phenotypic variation among lines for SLW. The Young alleles contributed to a greater SLW at four of the six independent marker loci, and transgressive segregation occurred among the progeny for SLW. Three putative independent RFLP markers were associated with leaf size, each explaining between 6 to 11% of the phenotypic variation in the trait, and one of these markers was identified in both environments. There was no correlation between SLW and leaf size in this population. Similarly, none of the six QTLs conditioning SLW were linked to any of the three QTLs for leaf size. In this soybean population, it is possible to select for progeny lines with greater SLW than either parent perhaps without affecting the leaf size. It is feasible to pyramid all of the desirable alleles for greater SLW and large leaf size in a single genetic background.
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    URL: http://dx.doi.org/10.1007/s001220050748
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    Genetics and molecular mapping of a male fertility restoration locus (Rfg1) in rye (Secale cereale L.) (1998)
    Springer
    Theoretical and applied genetics 97 (1998), S. 99-102 
    Details
    ISSN: 1432-2242
    Keywords: Key words Genetic mapping ; CMS ; Fertility restoration ; RAPD ; RFLP ; Rye ; Secale cereale L.
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  A gene determining the restoration of cytoplasmic genic male sterility (CMS) caused by the Gülzow (G)-type cytoplasm was mapped by analyzing an F2 and F3 population comprising 140 and 133 individual plants, respectively. The target gene, designated Rfg1, was mapped on chromosome 4RL distally to three RFLP (Xpsr119, Xpsr167, Xpsr899) and four RAPD (XP01, XAP05, XR11, XS10) loci. Xpsr167 and Xpsr899 are known to be located on the segment of chromosome 4RL which was ancestrally translocated and is homoeologous to the distal end of other Triticeae 6S chromosomes. It is suggested that Rfg1 may be allelic to the gene determining the restoration of rye CMS caused by the Pampa (P) cytoplasm (chromosome 4RL) and to Rfc4 that on rye addition lines of chromosome 4RL restores male fertility of hexaploid wheat with T. timopheevi cytoplasm. Homoeoallelism to two loci for cytoplasmic-male-sterility restoration on chromosomes 6AS and 6BS in hexaploid wheat is also suggested.
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    URL: http://dx.doi.org/10.1007/s001220050871
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    Genetic linkage map of peach [Prunus persica (L.) Batsch] using morphological and molecular markers (1998)
    Springer
    Theoretical and applied genetics 97 (1998), S. 888-895 
    Details
    ISSN: 1432-2242
    Keywords: Key words Prunus persica ; Linkage map ; RFLP ; RAPD ; AFLP
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  A genetic linkage map of peach [Prunus persica (L.) Batch] was constructed in order to identify molecular markers linked to economically important agronomic traits that would be particularly useful for long-lived perennial species. An intraspecific F2 population was generated from self-pollinating a single F1 plant from a cross between a flat non-acid peach, ‘Ferjalou Jalousia®’ and an acid round nectarine ‘Fantasia’. Mendelian segregations were observed for 270 markers including four agronomic characters (peach/nectarine, flat/round fruit, acid/non-acid fruit, and pollen sterility) and 1 isoenzyme, 50 RFLP, 92 RAPD, 8 inter-microsatellite amplification (IMA), and 115 amplified fragment length polymorphism (AFLP) markers. Two hundred and forty-nine markers were mapped to 11 linkage groups covering 712 centiMorgans (cM). The average density between pairs of markers is 4.5 cM. For the four agronomic characters studied, molecular markers were identified. This map will be used for the detection of QTL controlling fruit quality in peach and, particularly, the acid and sugar content.
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    Comparative RFLP mapping of Triticum monococcum genes controlling vernalization requirement (1998)
    Springer
    Theoretical and applied genetics 97 (1998), S. 968-975 
    Details
    ISSN: 1432-2242
    Keywords: Key words Triticum monococcum ; Vernalization genes ; Vrn-1 ; Vrn-2 ; RFLP ; Comparative maps
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  The adaptability of Triticum aestivum to a large range of environments is partially due to genetic differences in sensitivity to vernalization. The most potent gene reducing the vernalization requirement in hexaploid wheat is Vrn-A1. An orthologous vernalization gene, designated Vrn-A m 1, was mapped in the diploid wheat Triticum monococcum between RFLP markers Xwg908 and Xabg702 on the long arm of chromosome 5AmL. The orthology of VrnA m 1 with Vrn-A1 (5A wheat, originally Vrn1), Vrn-D1 (5D wheat, originally Vrn3), Vrn-R1 (5R rye, originally Sp1) and Vrn-H1 (5H barley, originally Sh2) was shown by mapping RFLP markers linked to these vernalization genes on the T. monococcum linkage map. A second vernalization gene, designated Vrn-A m 2, was found in the distal region of chromosome 5AmL within a segment translocated from homoeologous group 4. This gene is completely linked to RFLP marker Xbcd402 and located between the same RFLP markers (Xβ-Amy-1 and Xmwg616) as the Vrn-H2 (originally Sh) locus in Hordeum vulgare.
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    A molecular genetic map of the long arm of chromosome 6R of rye incorporating the cereal cyst nematode resistance gene, CreR (1998)
    Springer
    Theoretical and applied genetics 97 (1998), S. 1000-1012 
    Details
    ISSN: 1432-2242
    Keywords: Key words CCN ; RFLP ; PCR ; Heterodera avenae ; Genetic mapping
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  A genetic map of the long arm of chromosome 6R of rye was constructed using eight homoeologous group-6 RFLP clones and five PCR markers derived from the rye-specific dispersed repetitive DNA family, R173. The map was developed using a novel test-cross F1 (TC-F1) population segregating for resistance to the cereal cyst nematode. Comparisons were made between the map generated with other rye and wheat group-6 chromosome maps by the inclusion of RFLP clones previously mapped in those species. Co-linearity was observed for common loci. This comparison confirmed a dramatic reduction in recombination for chromosome 6R in the TC-F1 population. The CreR locus was included in the linkage map via progeny testing of informative TC-F1 individuals. CreR mapped 3.7 cM distal from the RFLP locus, XksuF37. Comparative mapping should allow the identification of additional RFLP markers more closely linked to the CreR locus.
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    Field measurements of gas exchange in Avicennia marina and Bruguiera gymnorrhiza (1998)
    Springer
    Mangroves and salt marshes 2 (1998), S. 99-107 
    Details
    ISSN: 1572-977X
    Keywords: conductance ; mangrove ; photosynthesis ; productivity ; water potential
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Diurnal gas exchange characteristics were measured simultaneously in two mangrove species, Avicennia marina and Bruguiera gymnorrhiza, over 7 d in summer (February–March), to compare their productivity. The study was undertaken in the Beachwood Mangroves Nature Reserve, Durban, South Africa, using fully expanded leaves of young and mature trees at the top of the canopy. Gas exchange was strongly influenced by photosynthetic photon flux density (PPFD), leaf temperature and the accompanying leaf to air vapour pressure deficit (Δ w). Carbon dioxide exchange was saturated at a PPFD of about 600 μmol m-2s-1 in B. gymnorrhiza compared to 800 μmol m-2s-1 in A. marina. Maximal CO2 exchange occurred between 12h00 and 14h00 and was consistently greater in A. marina (8.8 μmol m-2s-1) than in B. gymnorrhiza (5.3 mu;mol m-2s-1). Mean internal CO2 concentrations ( ci) were 260 μl l-1 in A. marina and 252 μl l-1 in B. gymnorrhiza. Photorespiratory activity was 32% in A. marina and 30% in B. gymnorrhiza. Mean water use efficiency (WUE) was 8.0 μmol mmol-1 in A. marina and 10.6 μmol mmol-1 in B. gymnorrhiza. Diurnal leaf water potentials ranged from –0.8 to –3.5 MPa and were generally lower in A. marina.
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    A Rapid DNA Extraction Method for RFLP and PCR Analysis from a Single Dry Seed (1998)
    Springer
    Plant molecular biology reporter 16 (1998), S. 90-90 
    Details
    ISSN: 1572-9818
    Keywords: DNA extration ; DNA fingerprint ; half seed ; PCR ; RFLP ; target gene
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A single-seed DNA extraction method was developed for rapid identification of plant genotype. The method was applied to 12 plant species, including the oil seeds sesame and soybean. The results were comparable to those obtained for oil-less seeds such as rice. This method will be useful for genotypic selection which requires rapid screening of large populations. It can also be used to identify varietal purity of seed stocks by PCR and RFLP analysis. The method includes two major steps, (i) treatment by proteinase K in an SDS extraction buffer, and (ii) grinding of a single half seed in the buffer after incubation. About 1.5–2 µg of DNA per half seed (the endosperm part) of rice was obtained and more than 200 half seed samples could be handled by one person in a day. The DNA could be used for fingerprinting and detection of target genes in a transgenic plant by PCR. The amplified PCR products from the half seed DNA exhibited the same banding patterns as those from leaf DNA. Yield and quality of DNA extracted from half seeds of rice was also sufficient for RFLP analysis. The remnant half seeds containing the embryo can be maintained for later germination of selected genotypes.
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    URL: http://dx.doi.org/10.1023/A:1007418606098
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    Comparative Analysis of Different DNA Extraction Protocols: A Fast, Universal Maxi-Preparation of High Quality Plant DNA for Genetic Evaluation and Phylogenetic Studies (1998)
    Springer
    Plant molecular biology reporter 16 (1998), S. 69-86 
    Details
    ISSN: 1572-9818
    Keywords: cpDNA ; DNA extraction ; fingerprinting ; forest trees ; M13 fingerprinting ; method ; PCR ; rDNA ; RFLP ; rhododendron ; plant
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Four DNA extraction protocols were compared for ability to produce DNA from the leaves or needles of several species: oak, elm, pine, fir, poplar and maize (fresh materials) and rhododendron (silica dried or frozen material). With the exception of maize and poplar, the species are known to be difficult for DNA extraction. Two protocols represented classical procedures for lysis and purification, and the other two were a combination of classical lysis followed by anion exchange chromatography. The DNA obtained from all procedures was quantified and tested by PCR and Southern hybridisation.Test results indicated superiority of one of the four protocols; a combination of CTAB lysis followed by anion exchange chromatography which enabled DNA extraction from all seven species. A second protocol also produced DNA from leaves or needles of all species investigated and was well suited for PCR applications but not Southern hybridisations. The remaining protocols produced DNA from some but not all species tested. Abbreviations: CTAB, hexadecyltrimethylammonium bromide; EtOH, Ethanol; TBE, tris-borate-EDTA.
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    Mangrove forest productivity and biomass accumulation in Hinchinbrook Channel, Australia (1998)
    Springer
    Mangroves and salt marshes 2 (1998), S. 191-198 
    Details
    ISSN: 1572-977X
    Keywords: canopy ; Hinchinbrook ; leaf area index ; mangrove ; photosynthesis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Data on stand structure and rates of photosynthesis were used to estimate net canopy carbon fixation and carbon accumulation as living biomass in mangrove forests in Hinchinbrook Channel, Australia. Total annual canopy net carbon fixation was estimated to be about 29 t C ha−1 yr−1. This equates to about 204,000 t C yr−1 for all mangrove forests in Hinchinbrook Channel. Of this, only about 12% was stored as living plant biomass. Although it is not yet possible to present a robust carbon balance for mangrove trees, the remainder is presumably lost through plant respiration, litter fall, root turnover and exudation of organic compounds from roots.
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    URL: http://dx.doi.org/10.1023/A:1009979610871
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    A new polymorphism in the promoter of the Interleukin 5 receptor alpha subunit (IL-5RA) gene (1998)
    Springer
    Immunogenetics 48 (1998), S. 65-66 
    Details
    ISSN: 1432-1211
    Keywords: Key words IL-5Rα ; Promoter ; Polymorphism ; RFLP
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/s002510050402
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    Changes in CO2 Exchange Rate, Stomatal Conductance, Activities of Photosystems 1 and 2, and Chloroplast Polypeptide Profile Induced by Simulated Acidic Rain (1998)
    Springer
    Photosynthetica 35 (1998), S. 353-359 
    Details
    ISSN: 1573-9058
    Keywords: absorption spectra ; chlorophyll fluorescence ; photosynthesis ; Vigna radiata
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract In seedlings of Vigna radiata (L.) R. Wilczek cultivars ADT-1 and CO-5 exposed to acidic showers (H2SO4 : HNO3 : HCl, 4 : 2 : 1, v/v) of different pH (7.0, 5.5, 4.0, and 2.5) for 10 d, net CO2 uptake and stomatal conductance were reduced. The chlorophyll (Chl) a and b contents were reduced but the carotenoid (Car) content increased. In vivo Chl a fluorescence patterns of both the cultivars were altered. No significant change in photosystem (PS) 1 activity was observed except at pH 2.5 where an inhibition was evident. By contrast, PS2 activities declined rapidly with increasing acidity. The room temperature absorption spectra of isolated chloroplasts showed very little changes. SDS-PAGE analysis revealed depletion of 23, 33, and 55 kDa polypeptides. Cultivar CO-5 was more sensitive to acidic rain than cv. ADT-1.
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    URL: http://dx.doi.org/10.1023/A:1006956100605
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    Oxygenic photosynthesis–a photon driven hydrogen generator–the energetic/entropic basis of life (1998)
    Springer
    Photosynthetica 35 (1998), S. 1-11 
    Details
    ISSN: 1573-9058
    Keywords: evolution ; hydrogen ; life ; photosynthesis ; radiant energy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Photosynthesis, as a fundamental element in the life process, is integrated in the evolution of living systems on the basis of hydrogen cycles on various hierarchic levels. Conversion of radiant energy enables the oxidation of water, whereby free oxygen accumulates in the atmosphere. Hydrogen is (reversibly) stored in organic materials formed under reductive CO2-fixation and by the incorporation of the other elements, which are necessary for living systems. All endergonic processes in living cells are finally driven by the energy released through the clean recombination of protons and electrons with oxygen to water. Duration of the stored energy and the complexity of the systems thus produced is correlated negatively with the conversion efficiency of the radiation energy. Entropy is a unifying principle in the evolution of living systems, inclusive human societies.
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    URL: http://dx.doi.org/10.1023/A:1006872110196
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    Action of Mercury on the Photosynthetic Apparatus of Spinach Chloroplasts (1998)
    Springer
    Photosynthetica 35 (1998), S. 551-559 
    Details
    ISSN: 1573-9058
    Keywords: EPR spectroscopy ; fluorescence spectroscopy ; HgCl2 ; photosynthesis ; radionuclide X-ray fluorescence analyses
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract In chloroplasts of Spinacea oleracea L., Hg2+ ions interact with some sites in the photosynthetic electron transport chain: (l) with the intermediates Z+/D+ situated in the D1 and D2 proteins and with the manganese cluster in the oxygen evolving complex which are located on the donor side of photosystem (PS) 2, (2) with the chlorophyll a dimer in the core of PS1 (P700). P700 is oxidized in the dark by HgCl2. The Hg2+ ions form organometallic complexes with amino acids contained in chloroplast proteins.
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    URL: http://dx.doi.org/10.1023/A:1006931024202
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    Relationships Between Nitrogen Content and Net Gas Exchange Components of a Cotton Leaf During Ontogeny (1998)
    Springer
    Photosynthetica 35 (1998), S. 631-635 
    Details
    ISSN: 1573-9058
    Keywords: Gossypium hirsutum ; leaf age ; photosynthesis ; stomatal conductance ; transpiration
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Relationships between leaf nitrogen (N) content and leaf gas exchange components of a single cotton (Gossypium hirsutum L.) leaf subtending the fruit during ontogeny were investigated under field conditions. A 20-d old leaf exhibited the highest physiological activity characterized by net photosynthetic (PN) and transpiration (E) rates, stomatal conductances to CO2 exchange (gsCO2) and water vapor transfer (gsH2O), and nitrogen (N) content. With the advent of leaf senescence, the gas exchange rates declined as exhibited by the 30-, 40-, and 60-d old leaves. Regression analysis indicated close relationships between gsCO2 and PN, and gsH2O and E as the leaves advanced towards senescence. Both PN and gsCO2 were related to N as they declined with leaf age. Thus, the declines in PN were associated with stomatal closure and removal of N during leaf ontogeny.
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    URL: http://dx.doi.org/10.1023/A:1006999511907
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    Characterisation of Erwinia carotovora subspecies and detection of Erwinia carotovora subsp. atroseptica in potato plants, soil and water extracts with PCR-based methods (1998)
    Springer
    European journal of plant pathology 104 (1998), S. 685-699 
    Details
    ISSN: 1573-8469
    Keywords: biochemical tests ; DAS-ELISA ; immunomagnetic separation ; RFLP
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract A PCR-RFLP test based on a pectate-lyase encoding gene permits the detection of several Erwinia carotovora subspecies, but requires complete DNA extraction. This paper reports on the suitability of a simplified PCR-RFLP protocol to characterise E. carotovora strains and on the performance of PCR, using the same primers, to detect the atroseptica subspecies in substrates of epidemiological significance. A collection of 140 strains from various hosts and geographical origins was characterised for biochemical traits and PCR-RFLPs. PCR performed on boiled bacterial suspensions yielded an amplification product of 434 bp in 109 of the 140 strains. None of the E. carotovora subsp. betavasculorum strains was amplified, even after complete DNA extraction. RFLPs of the PCR product yielded 24 groups, 3 of which were new. Twenty one groups were specific to one subspecies. Several strains biochemically similar to E. carotovora subsp. atroseptica, but growing at 37 °C, showed PCR-RFLP profiles characteristic of E. carotovora subsp. carotovora. Phenetic and cladistic analyses gave three main domains, not strictly related to hosts or geographical origins. The atroseptica (RFLP groups 1 and 2) and wasabiae (group 21) subspecies constituted one of the domains, despite clustering distantly from one another. Host specialisation and molecular homogeneity suggest a clonal structure within these subspecies. Conversely, E. carotovora subsp. odorifera, despite its limited host range and geographical distribution, and E. carotovora subsp. carotovora showed great molecular diversity, spreading respectively across five and 19 RFLP groups. These two subspecies shared RFLP groups 4, 5 and 6. The tree nodes in the phenograms showed a low robustness when bootstrapping the data matrix. PCR coupled with a 48h enrichment step in a polypectate-rich medium improved detection thresholds of E. carotovora subsp. atroseptica (1.5.102- 1.5.103 bacteria/ml in leaves, stems, and tuber peel extracts to 4.107 bacteria/ml in wash water) relative to either immunomagnetic separation coupled with PCR or DAS-ELISA (2.105 in plant samples to 2.107 bacteria/ml in wash water).
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    URL: http://dx.doi.org/10.1023/A:1008666801839
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    Application of photorespiration concepts to whole stream productivity (1998)
    Springer
    Hydrobiologia 389 (1998), S. 7-19 
    Details
    ISSN: 1573-5117
    Keywords: photosynthesis ; respiration ; photorespiration ; diel oxygen curve ; macrophytes
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract We conducted two-station diel surveys of dissolved oxygen content to estimate whole-stream productivity in the experimental streams of the Monticello Ecological Research Station for two years following channel reconstruction. Community productivity measurements compare well to previous measurements in these streams, but apparent hysteresis in the P/I relation was measured in over two-thirds of the diel surveys. Apparent hysteresis in photosynthesis with solar irradiance is a characteristic of photorespiration, and modeling the effect of light on whole-stream respiratory rates reduced the magnitude of P/I curve hysteresis and improved the predictions of dissolved oxygen content (DO) in the stream. Stream productivity models normally assume respiratory rates measured at night are constant throughout the day, but when this assumption yields apparent hysteresis in the P/I curve, the inclusion of a photorespiration model in the analyses of whole-stream productivity facilitates the comparison of photosynthesis and respiratory rates between different streams. The computed total daily consumption of oxygen by photorespiratory processes is proportional to the total daily photosynthetic production of oxygen in the streams. We also found that the diel DO curves occurring in the experimental streams are best described by a photorespiration model that utilizes a four hour moving average of irradiance. Accounting for photorespiration in the streams increases the apparent efficiency of photosynthesis, improves the accuracy of DO predictions, and reduces uncertainty in photosynthesis and respiratory rate estimates.
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    URL: http://dx.doi.org/10.1023/A:1003519302002
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    Interactive effects of elevated carbon dioxide and growth temperature on photosynthesis in cotton leaves (1998)
    Springer
    Plant growth regulation 26 (1998), S. 33-40 
    Details
    ISSN: 1573-5087
    Keywords: carbohydrates ; elevated CO2 ; Gossypium hirsutum L. ; interaction ; photosynthesis ; temperature
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Cotton (Gossypium hirsutum L., cv DPL 5415) plants were grown in naturally lit environment chambers at day/night temperature regimes of 26/18 (T-26/18), 31/23 (T-31/23) and 36/28 °C (T-36/28) and CO2 concentrations of 350 (C-350), 450 (C-450) and 700 μL L-1 (C-700). Net photosynthesis rates, stomatal conductance, transpiration, RuBP carboxylase activity and the foliar contents of starch and sucrose were measured during different growth stages. Net CO2 assimilation rates increased with increasing CO2 and temperature regimes. The enhancement of photosynthesis was from 24 μmol CO2 m-2 s-1 (with C-350 and T-26/18) to 41 μmol m-2 s-1 (with C-700 and T-36/28). Stomatal conductance decreased with increasing CO2 while it increased up to T-31/23 and then declined. The interactive effects of CO2 and temperature resulted in a 30% decrease in transpiration. Although the leaves grown in elevated CO2 had high starch and sucrose concentrations, their content decreased with increasing temperature. Increasing temperature from T-26/18 to 36/28 increased RuBP carboxylase activity in the order of 121, 172 and 190 μmol mg-1 chl h-1 at C-350, C-450 and C-700 respectively. Our data suggest that leaf photosynthesis in cotton benefited more from CO_2 enrichment at warm temperatures than at low growth temperature regimes.
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    Incongruence between RFLPs of chloroplast DNA and morphological classification in east Asian pear (Pyrus spp.) (1998)
    Springer
    Genetic resources and crop evolution 45 (1998), S. 533-539 
    Details
    ISSN: 1573-5109
    Keywords: chloroplast DNA ; hybridization ; introgression ; Pyrus ; RFLP
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Polymorphism of chloroplast DNA of 106 accessions of Pyrus (mainly east Asian accessions) was examined. Four haplotypes were observed with the combination of three independent restriction site mutations digested by EcoO109 I, Sal I, and Xba I, respectively. In the occidental pear accessions only the most plesiomorphic type was observed, whereas all four types appeared in the oriental pear accessions. This suggests that the oriental species of Pyrus and occidental ones may have evolved independently. The distribution of four haplotypes in the east Asian pear was quite incongruent with the species or infrageneric classification using mainly morphological characters. Considering the high crossability and much occurrence of suspected interspecific hybrids in wild populations, this disaccord is inferred to be the results of the hybridization and introgression between species.
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    URL: http://dx.doi.org/10.1023/A:1008646016181
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    Genetic diversity in coconut (Cocos nucifera L.) revealed by restriction fragment length polymorphism (RFLP) markers (1998)
    Springer
    Euphytica 101 (1998), S. 103-108 
    Details
    ISSN: 1573-5060
    Keywords: Cocos nucifera ; RFLP ; genetic diversity
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract A study of the genetic diversity in coconut by RFLP analysis was performed in 100 individuals representing 10 Tall and seven Dwarf local populations or 'ecotypes' from various geographical origins. Nine cDNA clones from rice, one mitochondrial DNA clone (CoxI) and one genomic clone (rDNA) from wheat were used as probe for southern hybridization. The distribution of the 40 polymorphic bands revealed by rice cDNA clones was studied using a multivariate analysis and allowed to identify two main genetical groups. The first one includes the ecotypes from the Far East and from the South Pacific, whereas the other one comprises the ecotypes from India, Sri Lanka and Western Africa. The rDNA and the CoxI probes confirm this distinction. The Far East and the Pacific regions which were the most likely center of origin also exhibit the widest polymorphism. The associations between the Panama Tall and the Pacific group and between the West African Tall and the Indian Ocean group reflect their likely origin. The Comoro Tall appears to be intermediate between the two main groups, and could reflect the old migration route between Indonesia and Madagascar. All Dwarf varieties belong to the first group, even those collected in West Africa. Those were probably introduced from Asia and Pacific at the beginning of the century. The cross-pollinating Tall ecotypes were generally more polymorphic than the self pollinating Dwarf ecotypes. The legitimacy of two hybrids between ecotypes was confirmed and maternal inheritance of mitochondrial genome was observed.
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    Loss of genetic diversity associated with selection for resistance to sorghum midge in Australian sorghum (1998)
    Springer
    Euphytica 102 (1998), S. 1-7 
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    ISSN: 1573-5060
    Keywords: genetic diversity ; linkage drag ; RFLP ; Stenodiplosis sorghicola ; sorghum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract In recent years, hybrids with levels of resistance to sorghum midge (Stenodiplosis sorghicola Coquillett) have become available to Australian sorghum producers. These hybrids have been readily accepted to the extent that more than 80% of the sorghum growing area was planted to hybrids with some level of midge resistance by 1995. Since selection for resistance to sorghum midge is one of the primary objectives of Australian sorghum breeding programs, the relationship between resistance and genetic diversity was investigated. Genetic diversity and heterozygosity were assessed using restriction fragment length polymorphism analysis among 26 grain sorghum hybrids grown commercially in Australia. The genetic distances between each sorghum hybrid and a standard highly resistant hybrid were found to be strongly negatively correlated to hybrid midge resistance ratings (r = - 0.77, p 〈 0.001). In addition, the average heterozygosity of each hybrid was correlated with their midge resistance ratings (r = - 0.54, p 〈 0.01). The results indicate that the move to midge resistant hybrids has been associated with a narrowing of the genetic diversity and average heterozygosity of commercial sorghum hybrids. Repeated use of particular elite parent lines, linkage drag and genetic drift are likely to have contributed to this decline. This reduction in genetic diversity may have implications for the genetic vulnerability of sorghum in Australia and the rate of progress in breeding for yield.
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    Inheritance and mapping of a light green mutant in cultivated diploid potatoes (1998)
    Springer
    Euphytica 103 (1998), S. 83-88 
    Details
    ISSN: 1573-5060
    Keywords: chlorophyll ; lethal ; marker gene ; photosynthesis ; Solanum tuberosum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract A light green mutant was found in a population of adapted cultivated diploid potatoes. Genetic analysis indicates that this trait is controlled by a single nuclear gene. The gene symbol lg is proposed. The segregation ratios fit a pattern which strongly suggest that there is a close linkage between the Lg allele and a locus which confers lethality in its homozygous recessive state. Some crossing over between the lg locus and the lethal was found to occur but LgLg genotypes were not observed in progenies from sib-matings. The lg locus mapped to the potato linkage group VI between the restriction fragment length polymorphism (RFLP) loci CP18 and GP24.
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    Formation of the tight-binding inhibitor, 3-ketoarabinitol-1,5-bisphosphate by ribulose-1,5-bisphosphate carboxylase/oxygenase is O2-dependent (1998)
    Springer
    Photosynthesis research 55 (1998), S. 67-74 
    Details
    ISSN: 1573-5079
    Keywords: epimerization ; isomerization ; inhibitor binding ; photosynthesis ; Rubisco
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) (EC 4.1.1.39) not only catalyzes carboxylation and oxygenation of ribulose-1,5-bisphosphate (RuBP), but it can also act either as an epimerase or isomerase converting RuBP into xylulose-1,5-bisphosphate (XuBP) or 3-ketoarabinitol-1,5-bisphosphate (KABP), respectively, a process called misfire. XuBP is formed as a result of misprotonation at C3 of the RuBP-enediol. It is released from Rubisco active sites and accumulates in the reaction mixture. Increasing the amounts of CO2 or O2 decreases XuBP production. However, KABP synthesis, which has been proposed to be only a product due to C2 misprotonation of the RuBP-endiol, is dependent upon the presence of O2. KABP remains tightly bound to Rubisco active sites after its formation, causing the loss of Rubisco activity (‘fallover’). The results suggest that the non-stabilized form of the peroxy-intermediate in the oxygenase reaction can be converted in a backreaction to KABP and molecular oxygen. The stabilization of the peroxy-intermediate due to the presence of Mn2+ instead of Mg2+ eliminates the formation of KABP.
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    Symmetry-related mutants in the quinone binding sites of the bacterial reaction center – the effects of changes in charge distribution (1998)
    Springer
    Photosynthesis research 55 (1998), S. 275-280 
    Details
    ISSN: 1573-5079
    Keywords: electron transfer ; phenotypic revertants ; photosynthesis ; proton transfer ; site-specific mutagenesis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract To probe the structural elements that contribute to the functional asymmetries of the two ubiquinone10 binding pockets in the reaction center of Rhodobacter capsulatus, we targeted the L212Glu–L213Asp (near QB) and the M246Ala-M247Ala (near QA) pairs of symmetry-related residues for site-specific mutagenesis. We have constructed site-specific mutants that eliminate the sequence differences at these positions (L212Glu–L213Asp→Ala-Ala or M246Ala–M247Ala→Glu-Asp), and have reversed that asymmetry by constructing a quadruple-mutant strain, ‘RQ’ (L212Glu–L213Asp-M246Ala–M247Ala→Ala-Ala-Gl u-Asp). The mutations were designed to change the charge distribution in the quinone-binding region of the reaction center; none of the strains is capable of photosynthetic growth. In photocompetent phenotypic revertants of the RQ strain, second-site mutations which affect QB function are coupled to mutations in the QA site which restore an Ala or substitute a Tyr at the M247 site; one strain carries an additional Met→Leu substitution at M260 near QA. All of the RQ revertants retain the engineered M246Ala→Glu mutation in the QA site as well as the L212Ala–L213Ala mutations in the QB site. Kinetic characterization of the RQ revertants will give us an idea of what structural and functional elements are important for restoring efficiency to electron and proton transfer pathways in the RQ RC, which is far from native. To date, these preliminary results underscore the importance of an asymmetric distribution of polar amino acids in the quinone binding pockets and its influence on the functional properties of the reaction center.
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    Free energy dependence of the direct charge recombination from the primary and secondary quinones in reaction centers from Rhodobacter sphaeroides (1998)
    Springer
    Photosynthesis research 55 (1998), S. 227-233 
    Details
    ISSN: 1573-5079
    Keywords: electron transfer ; hydrogen bond ; photosynthesis ; purple bacteria ; recombination rates ; site-directed mutagenesis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The direct charge recombination rates from the primary quinone, k AD (D+Q A − → DQA) and the secondary quinone, k BD (D+Q B − → DQB), in reaction centers from Rhodobacter sphaeroides were measured as a function of the free energy differences for the processes, ΔG AD 0 and ΔG BD 0 , respectively. Measurements were performed at 21 °C on a series of mutant reaction centers that have a wide range of dimer midpoint potentials and consequently a large variation in ΔG AD 0 and ΔG BD 0 . As –ΔG AD 0 varied from 0.43 to 0.78 eV, k AD varied from 4.6 to 28.6 s−1. The corresponding values for the wild type are 0.52 eV and 8.9 s−1. Observation of the direct charge recombination rate k BD was achieved by substitution of the primary quinone with naphthoquinones in samples in which ubiquinone was present at the secondary quinone site, resulting specifically in an increase in the free energy of the D+Q A − state relative to the D+QAQ B − state. As –ΔG BD 0 varied from 0.37 to 0.67 eV, k BD varied from 0.03 to 1.4 s−1. The corresponding values for the wild type are 0.46 eV and 0.2 s−1. A fit of the two sets of data to the Marcus theory for electron transfer yielded significantly different reorganization energies of 0.82 and 1.3 eV for k AD and k BD, respectively. In contrast, the fitted values for the coupling matrix element, or equivalently the maximum possible rate, were comparable (∼25 s−1) for the two charge recombination processes. These results are in accord with QB having more interactions with dipoles, from both the surrounding protein and bound water molecules, than QA and with the primary determinant of the maximal rate being the quinone-donor distance.
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    Photosynthetic electrogenic events in native membranes of Chloroflexus aurantiacus. Flash-induced charge displacements in the acceptor quinone complex of the photosynthetic reaction center (1998)
    Springer
    Photosynthesis research 56 (1998), S. 75-82 
    Details
    ISSN: 1573-5079
    Keywords: electrometry ; electron transfer ; membrane ; menaquinone ; photosynthesis ; potential ; proton transfer ; Rhodobacter sphaeroides ; Rhodopseudomonas viridis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The thermophilic phototroph Chloroflexus aurantiacus possesses a photosynthetic reaction center (RC) containing a pair of menaquinones acting as primary (MQa) and secondary (MQB) electron acceptors and a tetraheme cytochrome c554 as an electron donor. We used native, chlorosome-containing photosynthetic membranes of this bacterium to study the MQB turnover. The binary oscillations of the semiquinone form MQB − in response to a train of short light flashes were monitored at 416 nm, in the isosbestic point of the light-induced difference spectrum of cytochrome c554. After the first flash MQB − was formed, after the second one it disappeared due to the MQa −MQB − → MQaMQBH2 transition. The latter reaction was kinetically resolved by means of electrometry. For this purpose chromatophores of Chl. aurantiacus were adsorbed onto a phospholipid and menaquinone-impregnated collodion film. We found that after the second excitation flash, but not after the first one, the photoelectric response included, in addition to the fast kinetic components reflecting the charge separation between the tetraheme cytochrome c and MQa, a slower kinetic component with a rise time of 3 µs (pH = 8.3) and a relative amplitude of about 10% of the charge separation phase in the RC. We attributed this reaction to the electrogenic proton transfer which accompanied the transfer of the second electron during the MQa −MQB − → MQaMQBH2 transition. The rise time of the same reaction was reported to be almost three orders of magnitude slower in the isolated, proteoliposome-incorporated RC from this bacterium. The possible reasons of the faster turnover rates observed in the chlorosome-carrying native membrane preparations from Chl. aurantiacus are discussed.
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    Photosystem-II repair and chloroplast recovery from irradiance stress: relationship between chronic photoinhibition, light-harvesting chlorophyll antenna size and photosynthetic productivity in Dunaliella salina (green algae) (1998)
    Springer
    Photosynthesis research 56 (1998), S. 175-184 
    Details
    ISSN: 1573-5079
    Keywords: chlorophyll antenna size ; damage and repair cycle ; Dunaliella salina ; photoinhibition ; photosynthesis ; Photosystem-II ; photosystem stoichiometry ; productivity
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract High-light (HL) grown Dunaliella salina cells exhibit lower pigment content, a highly truncated chlorophyll (Chl) antenna size, and accumulation of photodamaged PS II centers in the chloroplast thylakoids (chronic photoinhibition). In HL-grown cells, the rate of photosynthesis saturated at higher irradiances and the quantum yield was lower compared to that of normally-pigmented low-light (LL) grown cells. In spite of these deficiencies, the light-saturated rate of photosynthesis for the HL-cells, when measured on a per chlorophyll basis, was ∼3 times greater than that of the LL-grown cells. To delineate the effect of photoinhibition from the Chl antenna size on quantum yield and rate of photosynthesis, HL-acclimated cells were switched to LL-conditions. Repair of photodamaged PS II, estimated from the recovery of functional PS II centers and from the increase in the quantum yield of photosynthesis, occurred with a half-time of ∼1 h. Chlorophyll accumulation in the cells occurred with a half-time of ∼4 h. The differential kinetics in repair versus Chl accumulation provided a ‘window of opportunity’, within about 2–3 h after the HL→LL shift, when cells exhibited a high quantum yield of photosynthesis, a small Chl antenna size and a light-saturated rate that was ∼6–9 times greater than that of the normally pigmented LL-grown cells. The work provides insight on the temporal sequence of events at the chloroplast and thylakoid membrane levels, leading from a chronic photoinhibition of PS II to repair and recovery. It is suggested that it is possible to maximize photosynthetic productivity and light utilization in mass microalgal cultures by minimizing the light-harvesting Chl antenna size of the photosystems.
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    URL: http://dx.doi.org/10.1023/A:1006024827225
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    Nonstructural carbohydrates of soybean plants grown in subambient and superambient levels of CO2 (1998)
    Springer
    Photosynthesis research 56 (1998), S. 143-155 
    Details
    ISSN: 1573-5079
    Keywords: carbon dioxide ; Glycine max ; photosynthesis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Elevated carbon dioxide (CO2) concentration increases plant photosynthesis, biomass and carbohydrate accumulation. Since plants have grown in low CO2 (200 to 300 µmol mol−1) for the last several million years, how will they use extra photoassimilate as the atmospheric CO2 continues to rise? The objectives were to determine the effects of past, present and projected future levels of CO2 on diurnal and seasonal patterns of total nonstructural carbohydrate (TNC) concentration of soybean [Glycine max (L.) Merr.] tissues. Plants were grown at 160, 220, 280, 330, 660 and 990 µmol mol−1 CO2 in outdoor, sunlit chambers wherein CO2 uptake rates were measured continuously. Early morning and late afternoon plant samples were taken at eight dates. The TNC concentration of leaves, petioles and stems increased as CO2 increased. Canopy photosynthetic rates also increased with increasing CO2, apparently without any negative impact of increased leaf TNC. Concentrations of TNC in all vegetative tissues were lower in the morning than the afternoon, which indicates overnight mobilization and utilization of carbohydrates for growth processes. The concentration of TNC was lowest in all plant components during rapid vegetative growth at V8 to R2 developmental stages. Leaves of all plants, especially those grown in superambient CO2, contained large pools of TNC at plant maturity, which indicated that not all of the reserves were utilized for seed yield. Soybean cultivars for the future should be designed to utilize carbohydrates more readily for seed production so that greater benefit can be realized from rising atmospheric CO2.
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    URL: http://dx.doi.org/10.1023/A:1006016009305
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    Photosystem I-dependent cyclic electron flow in intact spinach chloroplasts: Occurrence, dependence on redox conditions and electron acceptors and inhibition by antimycin A (1998)
    Springer
    Photosynthesis research 57 (1998), S. 61-70 
    Details
    ISSN: 1573-5079
    Keywords: electron transport ; nitrite ; oxaloacetate ; photosynthesis ; proton transport
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Photosystem I-dependent cyclic electron transport is shown to operate in intact spinach chloroplasts with oxaloacetate, but not with nitrite or methylviologen as electron acceptors. It is regulated by the redox state of the chloroplast NADP system. Inhibition of cyclic electron transport by antimycin A occurs immediately on addition of this antibiotic in the light. It is unrelated to a different function of antimycin A, inhibition of nonphotochemical quenching of chlorophyll fluorescence, which requires prior dissipation of the transthylakoid proton gradient before antimycin A can become effective.
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    URL: http://dx.doi.org/10.1023/A:1006072230864
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    Effects of high temperatures on the photosynthetic systems in spinach: Oxygen-evolving activities, fluorescence characteristics and the denaturation process (1998)
    Springer
    Photosynthesis research 57 (1998), S. 51-59 
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    ISSN: 1573-5079
    Keywords: chlorophyll fluorescence ; high-temperature stress ; O2 evolution ; photosynthesis ; Photosystem II ; spinach
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Activities of oxygen evolution, fluorescence Fv (a variable part of chlorophyll fluorescence) values, and amounts of the 33 kDa protein remaining bound to the thylakoids in intact spinach chloroplasts were measured during and after high-temperature treatment. The following results were obtained. (1) Both the Fv value and the flash-induced oxygen evolution measured by an oxygen electrode were decreased at high temperatures, but they showed partial recovery when the samples were cooled down and incubated at 25°C for 5 min after high-temperature treatment. (2) Oxygen evolution was more sensitive to high temperatures than the Fv value, and the decrease in the Fv/Fm ratio at high temperatures rather corresponded to that in the oxygen evolution measured at 25°C after high-temperature treatment. (3) Photoinactivation of PS II was very rapid at high temperatures, and this seems to be a cause of the difference between the Fv values and the oxygen-evolving activities at high temperatures. (4) At around 40°C, the manganese-stabilizing 33 kDa protein of PS II was supposed to be released from the PS II core complexes during heat treatment and to rebind to the complexes when the samples were cooled down to 25°C. (5) At higher temperatures, the charge separation reaction of PS II was inactivated, and the PS II complexes became less fluorescent, which was recovered partially at 25°C. (6) Increases in the Fv value due to a large decrease in the electron flow from QA to QB became prominent after high-temperature treatment at around 50°C. This was the main cause of the discrepancy between the Fv values and the oxygen-evolving activities measured at 25°C. Relationship between the process of heat inactivation of PS II reaction center complexes and the fluorescence levels is discussed.
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    URL: http://dx.doi.org/10.1023/A:1006019102619
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    Massive breakdown of the Photosystem II polypeptides in a mutant of the cyanobacterium Synechocystis sp. PCC 6803 (1998)
    Springer
    Photosynthesis research 57 (1998), S. 81-91 
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    ISSN: 1573-5079
    Keywords: D1 degradation fragments ; D1 proteolysis ; photosynthesis ; thylakoid membrane
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Degradation of the D1 protein of the Photosystem II (PS II) complex was studied in the Fad6/desA::Kmr mutant of a cyanobacterium Synechocystis sp. PCC 6803. The D1 protein of the mutant was degraded during solubilization of thylakoid membranes with SDS at 0°C in darkness, giving rise to the 23 kDa amino-terminal and 10 kDa carboxy-terminal fragments. Moreover, the D2 and CP43 proteins were also degraded under such conditions of solubilization. Degradation of the D2 protein generated 24, 17 and 15.5 kDa fragments, and degradation of the CP43 protein gave rise to 28, 27.5, 26 and 16 kDa fragments. The presence of Ca2+ and urea protected the D1, D2 and CP43 proteins against degradation. Degradation of the D1 protein was also inhibited by the presence of a serine protease inhibitor suggesting that the putative protease involved belonged to the serine class of proteases. The protease had the optimum activity at pH 7.5; it was active at low temperature (0°C) but a brief heating (65°C) during solubilization destroyed the activity. Interestingly, the protease was active in isolated thylakoid membranes in complete darkness, suggesting that proteolysis may be a non-ATP-dependent process. Proteolytic activity present in thylakoid membranes seemed to reside outside of the PS II complex, as demonstrated by the 2-dimensional gel electrophoresis. These results represent the first (in vitro) demonstration of strong activity of a putative ATP-independent serine-type protease that causes degradation of the D1 protein in cyanobacterial thylakoid membranes without any induction by visible or UV light, by active oxygen species or by any chemical treatments.
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    URL: http://dx.doi.org/10.1023/A:1006039929839
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    Alterations in Photosystem II electron transport as revealed by thermoluminescence of Cu-poisoned chloroplasts (1998)
    Springer
    Photosynthesis research 57 (1998), S. 175-181 
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    ISSN: 1573-5079
    Keywords: copper ; electron transport ; photosynthesis ; TyrosineZ
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The thermoluminescence characteristics of functionally intact thylakoids and TRIS-washed BBY particles were studied under Cu(II) poisoned conditions. In thylakoids, both the A and B thermoluminescence bands corresponding to S3QA - and S2S3QB - charge recombinations, respectively showed specific responses to Cu(II) treatment. The amplitude of the B band was gradually decreased, which corresponds to the Cu(II) induced inactivation of TyrZ. The simultaneous stepwise shift in the peak position of the B band indicated, however, that S3QB - charge recombination is more resistant to Cu(II) poisoned conditions. The shifted peak position of the A band toward the higher temperature in Cu(II) treated thylakoids also showed a change in the redox span between the recombination partners generating the A band of the glow curve. The AT band due to the His+QA - recombination in TRIS-washed BBY particles was insensitive to Cu(II) addition indicating that Cu(II) did not affect either His+ or QA -. The unaffected intensity of the A and AT bands when Cu(II) inhibits TyrZ function favours the assumption of an alternative pathway in which functional TyrZ is not required. In addition, Cu-induced changes of the TL bands were compared to those produced by the Tyr and His modifiers NBD and DEPC, respectively. We obtained very similar results regarding TL bands by either adding NBD or Cu-poisoning in functional thylakoids. Regarding DEPC, the A and AT bands were abolished by increasing concentrations of the His modifier. This effect was associated with the decrease of the B band and its replacement by the Q band at around 0 °C. Comparing our data obtained by Cu, NBD and DEPC treatments, we have found a strong interrelation between His+ and S3 state. We assume that in some inhibitory conditions in the S3 state His is oxidized in place of Mn and this alternative pathway does not require functional TyrZ.
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    URL: http://dx.doi.org/10.1023/A:1006051815176
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    Characterization of the Photosystem I subunits PsaI and PsaL from two strains of the marine oxyphototrophic prokaryote Prochlorococcus (1998)
    Springer
    Photosynthesis research 57 (1998), S. 183-191 
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    ISSN: 1573-5079
    Keywords: cyanobacteria ; photosynthesis ; Photosystem I ; prochlorophyte ; psaI ; psaL
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A 25 kDa protein associated with Photosystem I (PS I) of the divinyl-chlorophyll a/b-containing oxychlorobacterium Prochlorococcus marinus SS120 (CCMP 1375) was isolated, and the amino acid sequences of the N-terminus and one internal peptide were determined. Polymerase chain reaction (PCR) with degenerate primers yielded a 92 bp fragment, which was used to isolate the complete gene from a genomic library. The corresponding gene was isolated from a library of Prochlorococcus sp. MED4 (CCMP 1378). In both Prochlorococcus strains, the gene encodes a protein of 199 amino acids. The gene products show a strong sequence similarity to the PS I subunit PsaL. The N-terminus contains a hydrophilic domain that has not been found in PsaL proteins from other organisms. In both strains, sequences encoding a protein similar to PsaI were found upstream of the psaL gene. Both genes are transcribed in the same direction.
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    URL: http://dx.doi.org/10.1023/A:1006098510768
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    The effect of Photosystem II inhibitors DCMU and BNT on the high-light induced D1 turnover in two cyanobacterial strains Synechocystis PCC 6803 and Synechococcus PCC 7942 (1998)
    Springer
    Photosynthesis research 57 (1998), S. 193-202 
    Details
    ISSN: 1573-5079
    Keywords: herbicides ; photoinhibition ; photosynthesis ; protein degradation and synthesis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The effect of the Photosystem II (PSII) inhibitors dichlorophenyldimethylurea (DCMU) and bromonitrothymol (BNT) on the rate of the high-light induced D1 protein turnover was studied in whole cells of two cyanobacterial strains Synechocystis PCC 6803 and Synechococcus PCC 7942. In Synechocystis the D1 degradation was slowed down to a similar extent in the presence of either inhibitor compared with control cells. This slower degradation corresponded with the retardation of Photosystem II photoinactivation (PSIIPI) measured as a decline of PS II activity in the illuminated cells treated with chloramphenicol (CAP). The ongoing D1 synthesis in the presence of both PS II inhibitors was confirmed by unchanging PS II activity and the steady-state level of D1 during illumination in the absence of CAP. In Synechococcus cells both DCMU and BNT blocked the turnover of the 'low-light' D1 form (D1:1) but did not prevent the exchange of the 'high-light' form D1:2 for the D1:1 form. The similar effect of both herbicides on the D1 exchange was in contrast with their influence on the rate of PSIIPI. While DCMU had a pronounced protective effect, BNT significantly increased the rate of PS II photodamage. The fast BNT-induced decline of PS II activity was also observed in Synechocystis cells treated with azide, an inhibitor of reactive oxygen species scavenging enzymes. Therefore, we assume that the distinct sensitivity of the two cyanobacterial strains to BNT can be caused by different content and/or activity of these enzymes in each strain.
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    URL: http://dx.doi.org/10.1023/A:1006015214868
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    Characterization of a chloroplast inner envelope P-ATPase proton pump (1998)
    Springer
    Photosynthesis research 57 (1998), S. 323-333 
    Details
    ISSN: 1573-5079
    Keywords: ATPase phosphorylation ; chloroplast ; envelope ATPase ; photosynthesis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract P-ATPases such as the plasma membrane proton pump are known to generate a phosphorylated intermediate as a step in their reaction mechanism; phosphoenzyme formation is a basis for classification of an ATPase as a member of this subfamily of ion pumps. The chloroplast inner envelope is known to contain a H+-ATPase which acts to maintain an alkaline stroma and, thus, optimal photosynthesis. Our characterization of this chloroplast envelope proton pump described in this report focused on determining whether purified chloroplast inner envelope membrane protein preparations containing this ATPase form a phosphorylated intermediate. Incubation of envelope membranes with [γ-32P]ATP documented the formation of P-type ATPase phosphoenzyme intermediates by these membrane protein preparations. Our work cannot discount the possibility that more than one chloroplast inner envelope ATPase contributes to this phosphoenzyme formation. However, the kinetics of this phosphoenzyme formation, along with the sensitivity of phosphoenzyme formation to inhibitors and other assay conditions suggested that one of the envelope membrane proteins which is covalently radiolabeled by [γ-32P]ATP is a P-type H+-ATPase. Autoradiography of chloroplast envelope membrane proteins size fractionated on lithium dodecyl sulfate-PAGE indicated that the phosphoenzyme intermediate corresponds to a 103 kDa polypeptide. P-type proton pumps are known to be comprised of a single type of ∼100 kDa subunit. Experimental evidence presented in this report is consistent with the classification of a chloroplast inner envelope H+-ATPase as a P-type proton pump.
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    URL: http://dx.doi.org/10.1023/A:1006081309068
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    Diurnal rhythms in metabolism: A day in the life of a unicellular, diazotrophic cyanobacterium (1998)
    Springer
    Photosynthesis research 58 (1998), S. 25-42 
    Details
    ISSN: 1573-5079
    Keywords: circadian rhythms ; fluorescence ; gene regulation ; N2 fixation ; photosynthesis ; state transitions
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract N2 fixation and oxygenic photosynthesis are important metabolic processes that are at odds with each other, since the N2-fixing enzyme, nitrogenase, is highly sensitive to oxygen. This review will discuss the strategies devised by the unicellular, diazotrophic cyanobacterium, Cyanothece sp. ATCC 51142, to permit N2 fixation and photosynthesis to coexist in the same cell. This strain, like a number of other unicellular and filamentous (non-heterocystous) cyanobacteria, has developed a type of temporal regulation in which N2 fixation and photosynthesis occur at different times throughout a diurnal cycle. For nitrogenase, everyday dawns anew. The nifHDK operon is tightly regulated, such that transcription and translation occur within the first four hours of the dark period; nitrogenase is then proteolytically degraded. Photosynthesis also varies throughout the day reaching a minimum at the peak of nitrogenase activity and a maximum by late afternoon. This review will mainly concentrate on the various changes that occur in the photosynthetic apparatus as the cell modulates O2 evolution. The results indicate that the redox poise of the plastoquinone pool and the overall cellular energy needs are the basic driving forces behind these changes in the photosynthetic apparatus. Throughout the course of the diurnal cycle, Photosystem II becomes very heterogeneous as determined by 77 K fluorescence spectra, PAM fluorescence and O2-flash yield experiments. This system provides some important insight into cyanobacterial state transitions and, especially, on the organization of the photosystems within the membrane. Overall, PS II is altered on both the oxidizing and reducing sides of the photosystem.
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    Studies on photoacoustic uptake signals in tobacco leaves under high carbon dioxide levels (1998)
    Springer
    Photosynthesis research 58 (1998), S. 293-302 
    Details
    ISSN: 1573-5079
    Keywords: CO2 solubilization ; carbonic anhydrase ; Far-red light ; photosynthesis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Photoacoustic signals were measured in expanded tobacco leaves, exposed to a controlled atmosphere by being only partly enclosed within the photoacoustic cell. It was aimed to corroborate the conjecture of Reising and Schreiber (Photosynthesis Research 42: 65-73, 1994) that under exceptionally high CO2 levels (ca. 1–5%) the photobaric uptake contribution reflects CO2 uptake induced by light dependent stromal alkalinization. This is shown here by: (1) the shallower damping of the uptake signal vs. the modulation frequency, compared to a normal oxygen evolution signal; (2) the partial inhibition of the uptake signal under 5% CO2 by nigericin; (3) the complete absence of uptake signals under 5% CO2 in a carbonic-anhydrase-deficient mutant, which gave rather a normal oxygen evolution signal. The photoacoustic signals from the wild type and the transgenic tobacco in air could not be distinguished, indicating that the CO2 uptake signal is negligible under this condition. Uptake photobaric signals were also measured in modulated far-red light (ca. 715–750 nm), following addition of white background light (in light limiting intensity). In normal tobacco under 5% CO2, the background light induced an uptake transient, lasting about a minute, then declining to a low steady level. Significantly smaller transients were obtained under normal air, and in the carbonic-anhydrase deficient mutant also under 5% CO2. Extrapolation to zero frequency of the signal damping vs. modulation frequency, in both tobacco genotypes, suggests however similar magnitudes of the uptake transients. On the other hand, no proportional steady-state uptake was observed for the last two cases. Presumably, the steady uptake under 5% CO2 in modulated far-red light reflects CO2 solubilization, while it is an open question whether the transient could be partly contributed also by oxygen photoreduction by PS I (Mehler reaction). It is reasoned that, under conditions of low light, the respiratory activity results in accumulation of CO2 in the photoacoustic cell, which is sufficient to induce an uptake phenomenon, giving a more satisfactory interpretation for the so-called 'low light state' [Cananni and Malkin (1984) Biochim Biophys Acta 766: 525–532].
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    Measurement of photosynthetic oxygen evolution with a new type of oxygen sensor (1998)
    Springer
    Photosynthesis research 56 (1998), S. 223-227 
    Details
    ISSN: 1573-5079
    Keywords: luminescence quenching ; oxygen electrode ; oxygen optode ; photosynthesis ; pressure sensitive paint
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract We measured the light response curve of photosynthetic oxygen evolution by illuminating a leaf disc in an air-tight windowed chamber. Oxygen production was measured by monitoring the quenching of luminescence of an organometallic ruthenium compound. A photodiode based chlorophyll a fluorometer was used to measure the luminescence intensity. Oxygen evolution measurements with a traditional oxygen electrode gave the same numerical values at different light intensities when the same leaf disk was tested. The quality of the measurement signal of the new method was found to be similar to that obtained with the oxygen electrode method. The new luminescence based system is more stable against electrical disturbances than an oxygen electrode, its response to oxygen pressure changes is very rapid, and the new method allows the same basic equipment to be used for chlorophyll fluorescence and oxygen measurements.
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    Spectral characterization of NAD(P)H fluorescence in intact isolated chloroplasts and leaves: Effect of chlorophyll concentration on reabsorption of blue-green fluorescence (1998)
    Springer
    Photosynthesis research 56 (1998), S. 291-301 
    Details
    ISSN: 1573-5079
    Keywords: blue-green fluorescence (BGF) ; intact isolated chloroplasts ; Pisum sativum ; photosynthesis ; pyridine nucleotides ; Spinacia oleracea L
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract In the present communication we report a spectral analysis of the blue-green fluorescence related to changes in NAD(P) redox state in chloroplasts and leaves. To assess the contribution of reabsorption and the inner filter effect, we compared transmission and fluorescence at different chloroplast concentrations, and showed that reabsorption by the photosynthetic pigments (chlorophylls and carotenoids) was at the origin of the two peaks in the emission spectrum in vivo. The absence of potential green-emitting fluorophores in chloroplasts was determined by measuring variable and time-resolved fluorescence at different wavelengths. We defined the conditions which optimize the UV-excited blue-green fluorescence signal dependent on NAD(P)H, and we present an example of monitoring of NAD(P)H fluorescence in intact leaves.
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    URL: http://dx.doi.org/10.1023/A:1006081209887
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    Photochemical efficiency of Photosystem II and xanthophyll cycle components in Zea mays leaves exposed to water stress and high light (1998)
    Springer
    Photosynthesis research 56 (1998), S. 57-66 
    Details
    ISSN: 1573-5079
    Keywords: chlorophyll fluorescence ; C4 plant ; drought ; low CO2 ; photosynthesis ; zeaxanthin
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The effects of two light treatments (photosynthetically active photon flux density of either 650 or 1950 µmol m−2 s−1) on the photochemical efficiency of Photosystem II (PS II) (measured as variable to maximum fluorescence ratio) and on the xanthophyll cycle components was studied in wilted Zea mays leaves. For comparison, these parameters were followed under the same light conditions in well-hydrated leaves maintained either in normal or CO2-free air. The net CO2 assimilation of dehydrated leaves declined rapidly as their relative water content (RWC) decreased from 100 to 60% while the PS II efficiency measured after a prolonged dark period of 16 h declined only when RWC leaves was lower than 60%. Furthermore, drought caused an increase in the pool size of the xanthophyll cycle pigments and the presence of a sustained elevated level of zeaxanthin and antheraxanthin at the end of the long dark period. The leaf water deficit enhanced the sensitivity of PS II efficiency to light exposure. During illumination, strong inhibition of PS II efficiency and large violaxanthin deepoxidation was observed in wilted leaves even under moderate photon flux density compared to control leaves in the same conditions. After 2 h of darkness following the light treatment, the PS II efficiency that is dependent on the previous PPFD, decreased with leaf water deficit. Moreover, zeaxanthin epoxidation led to an accumulation of antheraxanthin in dehydrated leaves. All these drought effects on PS II efficiency and xanthophyll cycle components were also obtained in well-hydrated leaves by short-term CO2 deprivation during illumination. We conclude that the increased susceptibility of PS II efficiency to light in wilted maize leaves is mainly explained by the decrease of CO2 availability and the resulting low net CO2 assimilation.
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    On the long-wavelength spectral forms of chlorophyll a in Photosystem I: Spectroscopic and immunological investigations on a greening mutant of the green alga Scenedesmus obliquus (1998)
    Springer
    Photosynthesis research 55 (1998), S. 95-107 
    Details
    ISSN: 1573-5079
    Keywords: chloroplast development ; chlorophyll fluorescence ; LHC ; photosynthesis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The origin of the long-wavelength chlorophyll (Chl) absorption (λpeak 〉 680 nm) and fluorescence emission (λpeak 〉 685 nm) has been investigated on Scenedesmus mutants (C-2A′-series, lacking the ability to synthesize chlorophyll in the dark) grown at 0.3 (LL), 10 (ML) and 240 µE s−1 m−2(HL). LL cells are arrested in an early greening state; consequently, ‘Chl availability’ determines the phenotype. LL thylakoids are totally lacking long-wavelength Chl; nonetheless, PS I and PS II are fully functional. Gel electrophoresis and Western blots indicate that four out of seven resolved LHC polypeptides seem to require a high Chl availability for assembly of functional chlorophyll-protein complexes. The PS I core-complex of ML and HL thylakoids contains long-wavelength chlorophylls, but in the PS I core-complex of LL thylakoids these pigments are lacking. We conclude that long-wavelength pigments are only present in the PS I core in the case of high Chl availability. The following hypothesis is discussed: Chl availability determines not only the LHC polypeptide pattern, but also the number of bound Chl molecules per individual pigment-protein complex. Chl-binding at non-obligatory, peripheral sites of the pigment-protein complex results in long-wavelength Chl. In the case of low Chl availability, these sites are not occupied and, therefore, the long-wavelength Chl is absent.
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    Chromatophore heterogeneity explains phenomena seen in Rhodobacter sphaeroides previously attributed to supercomplexes (1998)
    Springer
    Photosynthesis research 55 (1998), S. 357-362 
    Details
    ISSN: 1573-5079
    Keywords: chromatophores ; electron transfer ; kinetics ; photosynthesis ; structure
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract It is generally considered that metabolic reactions are well described by homogeneous kinetic models in which the reaction phase is statistically uniform. In membranes, especially in photosynthetic systems where the protein complement is high, it has recently been recognized that effects of local heterogeneity might contribute additional factors that perturb the kinetic behavior, and require more extensive treatment. We show in this paper that statistical heterogeneity in vesicular systems can also contribute to quite marked discrepancies from the behavior expected from standard kinetic and thermodynamic models, for reactions involving free diffusion in the aqueous phase. We explain the kinetic and thermodynamic effects observed in studies of photosynthetic electron transfer in cells and chromatophores from Rhodobacter sphaeroides previously attributed to supercomplexes, in terms of a model based on heterogeneity in distribution of electron transfer components among the chromatophore population. We discuss examples of data inconsistent with the supercomplex model, but well explained by the heterogeneity model.
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    URL: http://dx.doi.org/10.1023/A:1005940120396
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    Leaf area expansion and assimilate production in sunflower (Helianthus annuus L.) growing under low phosphorus conditions (1998)
    Springer
    Plant and soil 202 (1998), S. 133-147 
    Details
    ISSN: 1573-5036
    Keywords: leaf expansion rate ; modelling ; phosphorus ; photosynthesis ; sunflower
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Reductions in leaf area and plant growth as a consequence of phosphorus (P) limitations have been attributed both to direct effects of P shortage on leaf expansion rate and to a reduced production of assimilates required for growth. Canopy assimilation and leaf area expansion are closely interrelated processes. In this work we used experimental and simulation techniques to identify and study their importance in determining leaf area on sunflower (Helianthus annuus L.) growing under P-deficient conditions. Experiment 1 was done outdoors, in Buenos Aires, Argentina, and Experiment 2 in a glasshouse in Wageningen, The Netherlands. In both experiments we studied the effects of soil P addition on leaf appearance, leaf expansion, dry matter accumulation, and leaf photosynthesis of non-water stressed plants grown in pots containing a P-deficient soil. Before sowing the equivalent amounts of 0–600 kg of super phosphate ha-1 were added to the pots. Phosphorus deficiency delayed leaf appearance increasing the value of the phyllochron (PHY) up to 76%, the rate of leaf area expansion during the quasi-linear phase of leaf expansion (LER) was reduced by up to 74%, with respect to high P plants. Phosphorus deficiency reduced by up to 50% the rate of light saturated photosynthesis per unit of leaf area (AMAX) in recently expanded leaves, while at low levels of leaf insertion in the canopy, AMAX was reduced by up to 85%, when compared to that in high P plants. Phosphorus deficiency also reduced the duration of the quasi-linear phase of leaf expansion by up to eight days. The values of LER were related (r = 0.56, P 〈 0.05) to the mean concentration of P in all the leaves (Leaves P%) and not to the concentration of P in the individual leaf where LER was determined (r = 0.22, P 〈 0.4) suggesting that under P deficiency individual leaf expansion was not likely to be regulated by the total P concentration at leaf level. The values of AMAX of individual leaves were related (r = 0.79, P 〈 0.01) to the concentration of total P in the corresponding leaf (Leaf P%). LER showed a hyperbolic relationship with Leaves P% (R2 = 0.94, P 〈 0.01, n = 13) that saturate at 0.14%. AMAX showed a hyperbolic relationship with Leaf P% (R2 = 0.73, P 〈 0.01, n = 53) that saturated with values of Leaf P% higher than 0.22. A morphogenetic model of leaf area development and growth was developed to quantify the effect of assimilate supply at canopy level on total leaf area expansion, and to study the effects of model parameters on the growth of sunflower plants under P-deficient conditions. With this model we identified the existence of direct effects of P deficiency on individual leaf area expansion. However, we calculated that under mild P stress conditions up to 83% of the reduction in the observed leaf area was explained by the particular effects of P% on the rate of leaf appearance, on the duration of the linear period of leaf expansion, and on the value of AMAX. We also calculated that the effects of P deficiency on the value of AMAX alone, explained up to 41% of the observed reductions in total leaf area between the highest and the intermediate P level in Experiment 2. Possible mechanisms of action of the direct effects of P on individual leaf expansion are discussed in this paper.
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    URL: http://dx.doi.org/10.1023/A:1004348702697
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    QTL mapping for nodule number and common bacterial blight in Phaseolus vulgaris L. (1998)
    Springer
    Plant and soil 204 (1998), S. 135-145 
    Details
    ISSN: 1573-5036
    Keywords: chalcone isomerase ; chalcone synthetase ; chitinase ; PAL ; phaseolin ; Phaseolus vulgaris ; QTL ; RFLP ; Rhizobium tropici ; Xanthomonas campestris bv. phaseoli
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract A recently developed bean RFLP linkage map was used to identify genetic elements affecting quantitative trait loci (QTLs) in two contrasting common bean genotypes, BAT-93 and Jalo EEP558, under two levels of mineral nitrogen: low – 0.25 mM NH4NO3 and a high – 6 mM NH4NO3. QTLs affecting nodule number (NN) and response to Xanthomonas campestris bv. phaseoli, which causes common bacterial blight (CBB) were identified and mapped. Analyses of 70 F2-derived F3 families, using the F1, the two parents, and a nodulation-defective mutant (Nod-) inoculated with R. tropici UM1899 under both levels of N showed significant differences (P#60;0.0001) among the F3 families for NN. Under low N, three genomic regions influenced both traits, with seven linked markers. In three of the six regions influencing NN, higher NN was associated with the Jalo EEP-558 allele, whereas in only two regions was the BAT-93 allele associated with higher NN. One-way analysis of variance, with each marker as the independent variable and NN as the dependent variable, and interval mapping analysis identified four QTLs, which accounted for 45% of the total variation, and two additional QTLs near to yet unassigned loci. In linkage group D7, one QTL mapped to the same region as a QTL for CBB. Under high N, three additional regions were linked to NN, one where the BAT-93 allele was closely associated with CH18 (chitinase), and the others where the Jalo EEP-558 allele was associated with CHS (chalcone synthetase) and PAL-1 (phenylalanine ammonia lyase). Four regions for CBB were mapped adjacent to or in the same region as a QTL for NN. Thus, N showed dual and opposite effects on the expression of NN and CBB. Analysis of these RFLP markers revealed these ‘hidden’ favorable alleles and can serve as an indirect selection tool to increase NN and resistance to CBB.
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    URL: http://dx.doi.org/10.1023/A:1004347515127
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    RFLP analysis of a PCR amplified region of chloroplast DNA in eggplant and related Solanum species (1998)
    Springer
    Euphytica 102 (1998), S. 295-299 
    Details
    ISSN: 1573-5060
    Keywords: chloroplast DNA ; eggplant ; PCR ; RFLP ; Solanum ; taxonomy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract RFLP analysis of a PCR amplified 3.2-kbp region of cpDNA bounded by the conserved sequences in rbc L and ORF 106 was performed in eggplant (Solanum melongena), its related Solanum species, S. incanum, S. virginianum (= S. surattense), S. torvum, S. aethiopicum (= S. gilo), S. aethiopicum (= S. integrifolium), S. violaceum (= S. indicum), S. violaceum (= S. sanitwongsei) and S. mammosum and the reciprocal hybrids between S. aethiopicum (= S. integrifolium) and S. melongena 'Uttara'. The target region of cpDNA was amplified correctly by PCR. The amplified products were digested with each of 10 restriction enzymes (Alu I, Ase I, BamH I, Hinf I, Msp I, Rsa I, ScrF I, Sty I, Taq I and Xba I). Variations of restriction patterns among the species were recognized after digesting the amplified products with each of the seven restriction enzymes, Taq I, Alu I, Rsa I, Sty I, Ase I, Hinf I and Xba I. The restriction patterns divided the examined nine species into the following five clusters, 1) S. melongena and S. incanum, 2) S. virginianum (= S. surattense), 3) S. torvum, 4) S. aethiopicum (= S. gilo), S. aethiopicum (= S. integrifolium), S. violaceum (= S. indicum) and S. violaceum (= S. sanitwongsei) and 5) S. mammosum. The restriction pattern with Alu I in each of the reciprocal hybrids between S. melongena 'Uttara' and S. aethiopicum (= S. integrifolium) was identical with that of seed parent. The present study demonstrated the availability of the PCR-RFLP analysis of cpDNA for assessing taxonomic relationships and identifying cytoplasmic parentage of interspecific hybrids in eggplant and related Solanum species.
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    URL: http://dx.doi.org/10.1023/A:1018304308608
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    Transpiration efficiencies of indica and improved tropical japonica rice grown under irrigated conditions (1998)
    Springer
    Euphytica 103 (1998), S. 103-108 
    Details
    ISSN: 1573-5060
    Keywords: Carbon isotope discrimination ; indica rice ; photosynthesis ; transpiration efficiency ; tropical japonica rice
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract There is limited information on the transpiration efficiency defined as the ratio of photosynthesis (A) to transpiration (T) of tropical japonica rice (Oryza sativa L.). In this study, transpiration efficiency (A/T) of seven tropical japonica lines developed by the International Rice Research Institute (IRRI) were compared with seven indica cultivars one week after flowering in 1993. The gas exchange rate and A/T of one genotype from each type were compared throughout the growing season in 1994. Both A and T were measured on topmost fully expanded leaves under saturating light with a portable photosynthesis system (LI-6200). Indica cultivars had higher T than the tropical japonica lines. The differences in A between the two types were relatively small and inconsistent across growth stages and years compared with the differences in T. The A/T was 25% and 30% higher for the tropical japonica than the indica type in 1993 and 1994, respectively. The differences in T and A/T between the two types were not related to the differences in leaf N content or leaf water content. A lower carbon isotope (13C) discrimination in a tropical japonica line than an indica cultivar confirmed that the improved tropical japonica lines had higher A/T than the indica cultivars.
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    URL: http://dx.doi.org/10.1023/A:1018383612439
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    Identification of genomic regions for rust resistance in sorghum (1998)
    Springer
    Euphytica 103 (1998), S. 287-292 
    Details
    ISSN: 1573-5060
    Keywords: Sorghum ; genome mapping ; rust ; RFLP ; QTL
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The location and effects of genomic regions for rust resistance in sorghum were determined. One hundred and sixty recombinant inbreds, which derived from a cross between QL39 and QL41, were used as a segregating population for genome mapping and rust resistance evaluation. Phenotypic data were collected in replicated field trials in two years. Interval mapping and non-parametric mapping identified four regions, each in a separate linkage group, associated with rust resistance. The region with the largest effect on rust resistance is on linkage group 10; it accounted for 40% of the total phenotypic variation.
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    URL: http://dx.doi.org/10.1023/A:1018332909752
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    The influence of salinity on growth, biomass production and photosynthesis of Eucalyptus camaldulensis Dehnh. and Dalbergia sissoo Roxb. seedlings (1998)
    Springer
    Plant and soil 205 (1998), S. 163-169 
    Details
    ISSN: 1573-5036
    Keywords: biomass ; growth ; photosynthesis ; salinity ; salt-tolerance
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The influence of NaCl salinity on growth, dry-matter production and leaf photosynthesis of seedlings of Eucalyptus camaldulensis Dehnh. and Dalbergia sissoo Roxb. was studied by imposing 4 levels (40, 80, 120 and 160 mM) of NaCl in pot culture. Salinity up to 160 mM did not affect plant survival, but did affect plant growth and dry-matter production depending upon the species and salt concentration. NaCl reduced leaf number and dry-weight of all the plant components, but increased stem dry-weight, especially in E. camaldulensis. Salinization also stimulated total dry-matter production at all the salinity levels in E. camaldulensis but only at 40 mM in D. sissoo. The two species varied in protein and chlorophyll concentration and in leaf photosynthetic rate. Protein and chlorophyll concentration of the plants fell at all the levels of NaCl, except at 40 mM, where stimulation in the photosynthetic carbon assimilation of the plants occurred. However, no distinct relationship between leaf photosynthetic rate and dry-matter production was found. The study indicated that low salt concentrations generally stimulated growth, biomass production and rate of photosynthesis in both the species, and E. camaldulensis appeared more NaCl salt-tolerant than D. sissoo.
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    URL: http://dx.doi.org/10.1023/A:1004381021039
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    Plant leaf area expansion and assimilate production in wheat (Triticum aestivum L.) growing under low phosphorus conditions (1998)
    Springer
    Plant and soil 200 (1998), S. 227-240 
    Details
    ISSN: 1573-5036
    Keywords: leaf expansion rate ; modelling ; phosphorus ; photosynthesis ; phyllochron ; wheat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Under phosphorus deficiency reductions in plant leaf area have been attributed to both direct effects of P on the individual leaf expansion rate and to a reduced availability of assimilates for leaf growth. In this work we use experimental and simulation techniques to identify and quantify these processes in wheat plants growing under P-deficient conditions. In a glasshouse experiment we studied the effects of soil P addition (0–138 kg P2O5 ha-1) on tillering, leaf emergence, leaf expansion, plant growth, and leaf photosynthesis of wheat plants (cv. INTA Oasis) that were not water stressed. Plants were grown in pots containing a P-deficient (3 mg P g-1 soil) sandy soil. Sowing and pots were arranged to simulate a crop stand of 173 plants m-2. Experimental results were integrated in a simulation model to study the relative importance of each process in determining the plant leaf area during vegetative stages of wheat. Phosphorus deficiency significantly reduced plant leaf area and dry weight production. Under P-deficient conditions the phyllochron (PHY) was increased up to a 32%, compared to that of high-P plants. In low-P plants the rate of individual leaf area expansion during the quasi-linear phase of leaf expansion (LER) was significantly reduced. The effect of P deficiency on LER was the main determinant of the final size of the individual leaves. In recently expanded leaves phosphorus deficiency reduced the photosynthesis rate per unit leaf area at high radiation (AMAX), up to 57%. Relative values of AMAX showed an hyperbolic relationship with leaf P% saturating at 0.27%. Relative values of the tillering rate showed an hyperbolic relationship with the shoot P% saturating at values above 0.38%. The value of LER was not related to the concentration of P in leaves or shoots. A morphogenetic model of leaf area development and growth was developed to quantify the effect of assimilate supply at canopy level on total leaf area expansion, and to study the sensitivity of different model variables to changes in model parameters. Simulation results indicated that under mild P stress conditions up to 80% of the observed reduction in plant leaf area was due to the effects of P deficiency on leaf emergence and tillering. Under extreme P-deficient conditions the simulation model failed to explain the experimental results indicating that other factors not taken into account by the model, i.e. direct effects of P on leaf expansion, must have been active. Possible mechanisms of action of the direct effects of P on individual leaf expansion are discussed in this work.
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    URL: http://dx.doi.org/10.1023/A:1004310217694
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    Morpho-physiological traits characterizing environmental adaptation of Avena barbata (1998)
    Springer
    Euphytica 99 (1998), S. 213-220 
    Details
    ISSN: 1573-5060
    Keywords: Above-ground biomass ; discriminant analysis ; environmental stress ; oat ; photosynthesis ; principal component analysis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Seventeen morphological and physiological characteristics of three Avena barbata L. populations from Israel were measured in order to define possible combinations explaining adaptation of these populations to different precipitation, temperature and altitude regimes. Five genotypes from each A. barbata populations were collected from Ashqelon (31°63′N, low annual precipitation), En Hamifraz (32°46′N, high temperature), and Mount Carmel (32°73′N, high altitude), Israel. The behavior of the populations was followed by measuring the morpho-physiological characteristics under well-watered and moderately drought stressed conditions. The experiment was conducted at the Department of Plant Production, University of Helsinki, Finland (60°13′N). The measured traits characterized macro-morphology, transpiration rate, photosynthesis and chloroplast features. The data were subjected to principal component and discriminant analyses and the characteristic combinations that most adequately accounted for the differences among A.barbata populations were established. Differences among the populations were related to adaptation to low water availability and high altitude characterized by special light conditions. The Mount Carmel population (high water availability, high light intensities and increased proportion of UV-light) was characterized by higher tillering, hairy leaf sheaths, high transpiration, high stomatal conductance, slow fluorescence quenching capacity, and less starch granules per chloroplast when compared with populations adapted to lower altitudes. The En Hamifraz population (high mean temperature) was characterized by a high CO2 exchange rate and both En Hamifraz and Ashqelon populations (both adapted to arid conditions) used water sparingly when moderately drought stressed.
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    URL: http://dx.doi.org/10.1023/A:1018387211499
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    Comparative analyses of RFLP diversity in landraces of Triticum aestivum and collections of T. tauschii from China and Southwest Asia (1998)
    Springer
    Theoretical and applied genetics 96 (1998), S. 312-318 
    Details
    ISSN: 1432-2242
    Keywords: Key words Genetic diversity ; Triticum tauschii ; Triticum aestivum ; RFLP ; Landrace wheat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Chinese accessions of Triticum tauschii and T. aestivum L. from the Sichuan white (SW), Yunnan hulled (YH), Tibetan weedrace (TW), and Xinjiang rice (XR) wheat groups were subjected to RFLP analysis. T. tauschii and landraces of T. aestivum from countries in Southwest Asia were also evaluated. For T. tauschii, a west to east gradient was apparent where the Chinese accessions exhibited less diversity than those from Southwest Asia. Compared to the Southwest Asian gene pool, the Chinese T. tauschii was highly homogeneous giving a low frequency of polymorphic bands (16%) and banding patterns (1.33 per probe) with 75 RFLP probe-HindIII combinations. Accessions of T. tauschii from Afghanistan and Pakistan were genetically more similar to the Chinese T. tauschii than those from Iran. Of 368 bands found for 39 Chinese hexaploid wheat accessions with 63 RFLP probe-HindIII combinations, 28.3% were polymorphic with an average of 2.6 banding patterns per probe and 5.0 bands per genotype. The individual Chinese landrace wheat groups revealed less variation than those from Afghanistan, Iran, and Turkey. When classified into country based groups, however, the diversity level over all Chinese landraces was greater than that of some Southwest Asian landraces, especially those from Afghanistan and Iran . The XR wheat group was genetically distinct from the other three Chinese landrace groups and was more related to the Southwest Asian landraces. The TW group was genetically similar to, but more diverse than, the SW and YH groups. The Chinese landraces had a higher degree of genetic relatedness to the Southwest Asian T. tauschii, particularly to accessions from Iran, rather than to the Chinese T. tauschii. ‘Chinese Spring’ was most related to ‘Chengdu-guang-tou’, a cultivar from the SW wheat group.
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    URL: http://dx.doi.org/10.1007/s001220050742
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    Composite and clinal distribution of Glycine soja in Japan revealed by RFLP analysis of mitochondrial DNA (1998)
    Springer
    Theoretical and applied genetics 96 (1998), S. 170-176 
    Details
    ISSN: 1432-2242
    Keywords: Key words Wild soybean ; Glycine soja ; RFLP ; Mitochondrial DNA ; Geographic distribution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Wild soybean (Glycine soja Sieb. et Zucc.), regarded as the progenitor of cultivated soybean [G. max (L.) Merr.], is widely distributed in East Asia. We have collected 1097 G. soja plants from all over Japan and analyzed restriction fragment length polymorphisms (RFLPs) of mitochondrial DNA (mtDNA) in them. Based on the RFLPs detected by gel-blot analysis, using coxII and atp6 as probes, the collected plants were divided into 18 groups. Five mtDNA types accounted for 94% of the plants examined. The geographic distribution of mtDNA types revealed that, in many regions, wild soybeans grown in Japan consisted of a mixture of plants with different types of mtDNA, occasionally even within sites. Some of the mtDNA types showed marked geographic clines among the regions. Additionally, some wild soybeans possessed mtDNA types that were identical to those widely detected in cultivated soybeans. Our results suggest that the analysis of mtDNA could resolve the maternal lineage among plants of the genus Glycine subgenus Soja.
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    URL: http://dx.doi.org/10.1007/s001220050724
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    A genetic linkage map of rye (Secale cereale L.) (1998)
    Springer
    Theoretical and applied genetics 96 (1998), S. 203-208 
    Details
    ISSN: 1432-2242
    Keywords: Key words Genetic mapping ; Reciprocal crosses ; RFLP ; Rye ; Secale cereale L.
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  A genetic linkage map of rye composed of 91 loci (88 RFLP, two morphological and one isozyme markers) has been developed using two reciprocal crosses. The RFLP loci covering all seven chromosomes were detected by a selection of rye, wheat, barley and oat cDNA and genomic DNA probes. The level of polymorphism was dependent on the source of the clones, with a ranking of rye〉wheat〉barley〉oat. Distorted segregations were detected in linkage groups of chromosomes 1R, 4R, 5R and 7R. When the recombination of the two reciprocal crosses was compared, no systematic increase or decrease in one or the other direction was observed suggesting that a combination of populations of reciprocal crosses is possible.
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    URL: http://dx.doi.org/10.1007/s001220050728
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    Targeted mapping approaches to identify DNA markers linked to the Rfp1 restorer gene for the ‘Polima’ CMS of canola (Brassica napus L.) (1998)
    Springer
    Theoretical and applied genetics 97 (1998), S. 431-438 
    Details
    ISSN: 1432-2242
    Keywords: Key words Targeted mapping ; RFLP ; RAPD ; Brassica napus ; Polima CMS ; Nearly isogenic line ; Bulked segregant analysis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  We have used two targeting approaches [pairs of nearly isogenic lines (NILs) and bulked segregant analysis] to identify DNA markers linked to the Rfp1 restorer gene for the pol CMS of canola (Brassica napus L.). We were able to target the Rfp1 locus as efficiently by comparing NILs as by bulked segregant analysis, and it was demonstrated in this instance that double-screening strategies could significantly improve the overall targeting efficiency. The chance occurrence of shared homozygosity at specific unlinked chromosomal regions in the bulks was found to limit the efficiency of bulked segregant analysis, while the efficiency of NIL comparison was limited by residual DNA from the donor cultivar at scattered sites throughout the genome of the NILs.
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    URL: http://dx.doi.org/10.1007/s001220050913
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    Ground cover, photosynthetic rate and tuber yield of potato (Solanum tuberosum L.) crops from seed tubers with different physiological age modified by foliar applications of plant growth regulators (1998)
    Springer
    Potato research 41 (1998), S. 175-185 
    Details
    ISSN: 1871-4528
    Keywords: benzylaminopurine ; gibberellic acid ; senescence ; photosynthesis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Summary The modifying effects of applying the plant growth regulators (PGRs) benzylaminopurine (BAP), gibberellic acid (GA3) and BAP+GA3 on physiological age were studied. Two experiments with two cultivars, differing in rate of physiological ageing (medium-early Pampeana, medium-late Huinkul) and two storage systems were performed during 1988/89 and 1989/90 in two different potato areas of Argentina. In both seasons seed tubers stored in heaps reached an advanced physiological age at planting, compared with tubers from the cold store. Seed tubers of cv. Pampeana were older than those of Huinkul. compared with control crops, those sprayed with BAP maintained ground cover and photosynthesis for longer, and those sprayed with GA3 for a shorter period. Consequently tuber yield was decreased by GA3 in 1988/89, but in 1989/90 all crops treated with PGRs outyielded the control. BAP could overcome effects of advanced physiological age on crop senescence and tuber yield.
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    URL: http://dx.doi.org/10.1007/BF02358440
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    Photosynthetic and population growth response of the test alga Selenastrum capricornutum Printz to zinc, cadmium and suspended sediment elutriates (1998)
    Springer
    Journal of applied phycology 10 (1998), S. 145-151 
    Details
    ISSN: 1573-5176
    Keywords: 14C ; photosynthesis ; population growth ; Selenastrum capricornutum ; suspended sediment elutriate ; zinc ; cadmium
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Short-term 14C-fixation (4 h) Selenastrum capricornutum algal toxicity tests were conducted with Cd (n=8), Zn (n=9) and suspended sediment aqueous elutriates (n=28) and the results were compared to those obtained in a 48 h population growth test. In order to provide more realistic experimental conditions, toxicity tests were carried out in prefiltered nutrient-spiked Lake Geneva water. The population growth inhibition test was significantly more sensitive than the14 C-fixation test for Cd (median EC50-4h and EC50-48h values of 600 and 118 µg L-1, respectively) whereas no significant difference was measured for Zn toxicity (median EC50-4h and EC50-48h values of 97 and 96 µg L-1, respectively). With suspended sediment aqueous elutriates, the relative sensitivity of the two different end points is sample dependent, with ratios of the EC25 for the14 C-fixation: population growth test ranging from 〈0.26 to 〉53.3. Elutriate toxicity shows no apparent relationship between the acute and chronic test, indicating that population growth inhibition cannot be derived directly or predicted from14 C-fixation. Both tests with their specific advantages and limitations provide valuable complementary information to measure the impact of single toxicants or complex mixtures on aquatic plants.
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    URL: http://dx.doi.org/10.1023/A:1008043931094
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    Effect of thiobencarb on growth and photosynthesis of the soil alga Protosiphon botryoides (Chlorophyta) (1998)
    Springer
    Journal of applied phycology 10 (1998), S. 547-554 
    Details
    ISSN: 1573-5176
    Keywords: herbicide ; green alga ; growth ; nutrients ; photosynthesis ; it Protosiphon botryoides ; respiration ; Thiobencarb
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The effects of the herbicide thiobencarb (Saturn) were tested on the growth and physiology of the chlorophyte Protosiphon botryoides isolated from an Egyptian paddy. Assays were conducted using 16-day batch cultures. Chlorophyll and dry weight biomass yields were significantly reduced at 2–3 mg L-1 thiobencarb, and dark respiration increased and protein decreased significantly at 3 mg L-1. Reductions in exponential specific growth rate (μ) were generally small, but in some cases significant. Thiobencarb also slightly, but significantly, reduced the 77 K fluorescence parameter Fv/Fm, an indicator of maximum photosynthetic efficiency. No consistent dose-dependent changes occurred in chlorophyll per unit dry weight, total carbohydrate or gross photosynthetic capacity. Whereas half of the added thiobencarb was recovered from control (uninoculated) medium, it was largely absent from cells and culture medium after sixteen days, indicating biodegradation by the alga or associated bacteria. P. botryoides recovered fully within sixteen days following subculture in thiobencarb-free medium. Independently varying phosphate and nitrate nine-fold had no clear effect on the sensitivity of P. botryoides to thiobencarb.
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    URL: http://dx.doi.org/10.1023/A:1008092826338
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    Reduced photoinhibition of a phycocyanin-deficient mutant of Synechocystis PCC 6714 (1998)
    Springer
    Journal of applied phycology 10 (1998), S. 447-452 
    Details
    ISSN: 1573-5176
    Keywords: dense algal suspension ; light-harvesting pigment ; photosynthesis ; Synechocystis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The effects on photoinhibition of light-harvesting pigments in microalgal cells were examined using the wild type and a phycocyanin- deficient mutant (PD-1) of Synechosystis PCC 6714. Mutant PD-1 showed higher resistance to high light than the wild type in terms of the decline of photosynthetic activity at any light intensity and with various cell densities. This suggests that the loss of productivity induced by high light intensity would be improved by reducing the content of light-harvesting pigments.
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    URL: http://dx.doi.org/10.1023/A:1008049901939
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    Effects of increased atmospheric CO2 and N supply on photosynthesis, growth and cell composition of the cyanobacterium Spirulina platensis (Arthrospira) (1998)
    Springer
    Journal of applied phycology 10 (1998), S. 461-469 
    Details
    ISSN: 1573-5176
    Keywords: Cyanobacterium ; Spirulina platensis ; Arthrospira ; CO2 ; organic carbon ; nitrogen ; photosynthesis ; batch culture
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The consequences of the addition of CO2 (1%) in cultures of S. platensis are examined in terms of biomass yield, cell composition and external medium composition. CO2 enrichment was tested under nitrogen saturating and nitrogen limiting conditions. Increasing CO2 levels did not cause any change in maximum growth rate while it decreased maximum biomass yield. Protein and pigments were decreased and carbohydrate increased by high CO2, but the capability to store carbohydrates was saturated. C:N ratio remained unchanged while organic carbon released to the external medium was enhanced, suggesting that organic carbon release in S. platensis is an efficient mechanism for the maintenance of the metabolic integrity, balancing the cell C:N ratio in response to environmental CO2 changes. CO2 affected the pigment content: Phycocyanin, chlorophyll and carotenoids were reduced in around 50%, but the photosynthetic parameters were slightly changed. We propose that in S. platensis CO2 could act promoting degradation of pigments synthetised in excess in normal CO2 conditions, that are not necessary for light harvesting. Nitrogen assimilation was significantly not affected by CO2, and it is proposed that the inability to stimulate N assimilation by CO2 enrichment determined the lack of response in maximum growth rate.
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    URL: http://dx.doi.org/10.1023/A:1008090402847
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    Characterization and transcriptional regulation of the Synechocystis PCC 6803 petH gene, encoding ferredoxin-NADP+ oxidoreductase: involvement of a novel type of divergent operator (1998)
    Springer
    Plant molecular biology 36 (1998), S. 353-363 
    Details
    ISSN: 1573-5028
    Keywords: ferredoxin-NADP+ oxidoreductase ; petH ; divergent operator ; antisense mRNA ; phosphoribulokinase ; prk Synechocystis PCC 6803 ; photosynthesis ; cyanobacteria
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The petH gene, encoding ferredoxin-NADP+ oxidoreductase (FNR), has been characterised in the unicellular cyanobacterium Synechocystis PCC 6803. Its product, FNR, was heterologously produced and functionally characterized. The start-site of the monocystronic petH transcript was mapped 523 bp upstream of the predicted PetH initiation codon, resulting in an unusually large 5′-untranslated region. The 5′ end of the petH transcript is situated within the open reading frame of phosphoribulokinase (encoded by prk), which is transcribed in opposite orientation with respect to petH. The transcription start site of the prk transcript was mapped 219 bp upstream of the initiation codon, resulting in a 223 bp antisense region between both transcripts. Under many conditions the expression of both genes (i.e. petH and prk) is co-regulated symmetrically at the transcriptional level, as was concluded from both northern hybridization experiments and from primer extension analyses; it became uncoupled, however, when specifically petH expression was stimulated, independent of prk expression, by stressing the Synechocystis cells with high salt concentrations. A model for a new type of bidirectional operator, regulating the expression of petH and prk, is proposed.
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    URL: http://dx.doi.org/10.1023/A:1005935819038
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    Isozyme diversity, RFLP of the rDNA and phylogenetic affinities among cultivated Lima beans,Phaseolus lunatus (Fabaceae) (1998)
    Springer
    Plant systematics and evolution 213 (1998), S. 153-164 
    Details
    ISSN: 1615-6110
    Keywords: Leguminosae ; Phaseolus ; Isozymes ; genetic distance ; Lima bean ; rDNA ; RFLP
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Genetic variation inPhaseolus lunatus (Lima bean) was investigated at isozyme and DNA levels. Sixty cultivated accessions, including representatives of the Mesoamerican and Andean gene pools and intermediate types, were analyzed for variability at 17 isozyme loci. Some accessions were also examined for restriction fragment length polymorphism (RFLP) at the rDNA level. These data were used to construct two dendrograms showing clear separation in two distinct groups corresponding to each of the gene pools and an intermediate one probably representing a transitional group.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF00985196
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    A second spontaneous hybrid in the genusLeucaena (Leguminosae, Mimosoideae) (1998)
    Springer
    Plant systematics and evolution 212 (1998), S. 53-77 
    Details
    ISSN: 1615-6110
    Keywords: Leguminosae ; Leucaena leucocephala ; L. diversifolia ; L. ×spontanea ; Hybridization ; hybrid detection ; spontaneous hybrid ; RAPD ; RFLP ; chloroplast DNA
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The detection of hybridity inLeucaena is discussed in relation to: (i) traditional criteria, (ii) molecular criteria and (iii) models to predict hybrid leaf morphology. Morphological, geographical and molecular evidence for the occurrence of interspecific hybrids betweenL. leucocephala andL. diversifolia in south-central Mexico, northern Guatemala, Jamaica, Dominican Republic, the Philippines and Papua New Guinea is presented. Predicted mean hybrid leaf trait values calculated from parent material are compared with data from putative hybrids and shown to be similar. The origin of these hybrids is discussed and shown to be the result of artificial sympatry resulting from indigenous, and recent exotic, domestication of the parent species. The hybrid is described asL. ×spontanea.
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    URL: http://dx.doi.org/10.1007/BF00985221
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  • 87
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    Light response curves for Gelidium sesquipedale from different depths, determined by two methods: O2 evolution and chlorophyll fluorescence (1998)
    Springer
    Journal of applied phycology 10 (1998), S. 295-301 
    Details
    ISSN: 1573-5176
    Keywords: Gelidium sesquipedale ; photosynthesis ; fluorescence ; light response curves ; pigments ; depth
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Photosynthesis-light response curves of Gelidium sesquipedale from the west coast of Portugal (Cape Espichel) were determined at four different depths, 3, 10, 15 and 22 m. Data acquisition using chlorophyll a fluorescence methodology and oxygen electrode measurements were compared. Response curves were determined over an increasing range of irradiance values (I), from darkness to 900 μmol photon m-2 s-1 PAR. In general, light response curves obtained for G. sesquipedale showed a similar pattern whether determined by the chlorophyll fluorescence method or by oxygen evolution. The photosynthetic capacity of G. sesquipedale decreased with depth, as expected, revealing a ‘sun’ and ‘shade’ acclimation pattern, between shallow and deeper waters.
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    URL: http://dx.doi.org/10.1023/A:1008057008447
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    Effects of solar UV stress on chlorophyll fluorescence kinetics of intertidal macroalgae from southern Spain: a case study in Gelidium species (1998)
    Springer
    Journal of applied phycology 10 (1998), S. 285-294 
    Details
    ISSN: 1573-5176
    Keywords: UV-radiation ; chlorophyll fluorescence ; photosynthesis ; stress tolerance ; electron transport
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Photoinhibition and recovery kinetics after short exposure to solar radiation following three different irradiance treatments of irradiances (PAR, PAR+UVA and PAR+UVA+UVB) was assessed in two intertidal species of the genus Gelidium, Gelidium sesquipedale and G. latifolium, collected from Tarifa (southern Spain) using in vivo chlorophyll fluorescence (PAM fluorometry). After 3 h UV radiation exposure, optimal quantum efficiency (Fv/Fm) in G. sesquipedale decreased between 25 and 35% relative to the control. Under PAR alone, values decreased to 60%. In G. latifolium, photoinhibition did not exceed 40%. Similar results were found for the effective quantum yield (ΔF/Fm′), however, no marked differences in relation to light treatments were seen. When plants were shaded for recovery from stress, only in G. latifolium a significant increase in photosynthesis was observed (between 80 and 100% of control). In contrast, photosynthesis of G. sesquipedale suffered a chronic photoinhibition or photodamage under the three light irradiances. Full solar radiation (PAR+UVA+UVB) affected also the electron transport rate in both species. Here, initial slopes of electron transport vs. irradiance curves decreased up to 60% of controls. Although the recovery kinetic under PAR+UVA+UVB conditions was delayed in G. latifolium, after 24 h recovery this species reached significantly higher than G. sesquipedale. PAR impaired electron trasport only in G. sesquipedale. Overall, both species are characterized by different capacity to tolerate enhanced solar radiation. G. latifolium is a sun adapted plant, well suited to intertidal light conditions, whereas G. sesquipedale, growing at shaded sites in the intertidal zone, is more vulnerable to enhanced UV radiation.
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    URL: http://dx.doi.org/10.1023/A:1008021230738
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    Response of the tropical red seaweed Gracilaria cornea to temperature, salinity and irradiance (1998)
    Springer
    Journal of applied phycology 10 (1998), S. 419-425 
    Details
    ISSN: 1573-5176
    Keywords: Gracilaria cornea ; photosynthesis ; respiration ; chlorophyll ; phycoerythrin ; Florida ; salinity ; temperature ; irradiance
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The agarophyte Gracilaria cornea, collected over 2.5 y in the Florida Keys, shows adaptations to oceanic salinities and subtropical to tropical water temperatures in its photosynthetic and respiratory responses as measured with a respirometer. No seasonal pattern in responses to irradiance, temperature, and salinity were evident between five collections over a 20-month period, indicating the tropical nature of the populations from Bahia Honda and Pigeon Keys. Concentrations of chlorophyll a (0.09 to 0.41 mg g d wt-1) and phycoerythrin (0.06 to 0.36 mg g d wt- 1) were low and reflect the low nutrient regime of the habitats, especially when compared to laboratory cultured plants. Compensation and saturation irradiances were also low (11–38 and 90–127 μmol photon m-2 s-1), indicating acclimation to lower irradiances in their shallow (1–2 m depth) habitats where turbidity can be high. In comparison with other subtropical and warm temperate species of Gracilaria, G. cornea had lower levels of pigment, but similarly high photosynthetic efficiency, demonstrating shade adaptation; it had only limited tolerance to salinities below 20‰ and temperatures below 15 °C. Thus, G. cornea from the Florida Keys in mariculture would require subtropical to tropical temperatures and stable oceanic salinities.
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    URL: http://dx.doi.org/10.1023/A:1008021613399
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    Dunaliella salina (Chlorophyta) with small chlorophyll antenna sizes exhibit higher photosynthetic productivities and photon use efficiencies than normally pigmented cells (1998)
    Springer
    Journal of applied phycology 10 (1998), S. 515-525 
    Details
    ISSN: 1573-5176
    Keywords: Chlorophyll antenna size ; damage and repair cycle ; photon use efficiency ; photosynthesis ; photoinhibition ; Dunaliella salina
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The photon use efficiencies and maximal rates of photosynthesis in Dunaliella salina (Chlorophyta) cultures acclimated to different light intensities were investigated. Batch cultures were grown to the mid-exponential phase under continuous low-light (LL: 100 μmol photon m-2 s-1) or high-light (HL: 2000 μmol photon m-2 s-1) conditions. Under LL, cells were normally pigmented (deep green) containing ∼500 chlorophyll (Chl) molecules per photosystem II (PSII) unit and ∼250 Chl molecules per photosystem I (PSI). HL-grown cells were yellow-green, contained only 60 Chl per PSII and 100 Chl per PSI and showed signs of chronic photoinhibition, i.e., accumulation of photodamaged PSII reaction centers in the chloroplast thylakoids. In LL-grown cells, photosynthesis saturated at ∼200 μmol photon m-2 s-1 with a rate (Pmax) of ∼100 mmol O2 (mol Chl)-1 s-1. In HL-grown cells, photosynthesis saturated at much higher light intensities, i.e. ∼2500 μmol photon m-2 s-1, and exhibited a three-fold higher Pmax (∼300 mmol O2 (mol Chl)-1 s-1) than the normally pigmented LL-grown cells. Recovery of the HL-grown cells from photoinhibition, occurring prior to a light-harvesting Chl antenna size increase, enhanced Pmax to ∼675 mmol O2 (mol Chl)-1 s-1. Extrapolation of these results to outdoor mass culture conditions suggested that algal strains with small Chl antenna size could exhibit 2–3 times higher productivities than currently achieved with normally pigmented cells.
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    URL: http://dx.doi.org/10.1023/A:1008076231267
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    Comparison of PCR-RFLP analysis of the ITS region with morphological criteria of various strains of Dunaliella (1998)
    Springer
    Journal of applied phycology 10 (1998), S. 573-580 
    Details
    ISSN: 1573-5176
    Keywords: Dunaliella ; ITS ; PCR ; RFLP ; strains ; taxonomy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The genus Dunaliella comprises 28 species defined primarily by morphological and physiological criteria, which vary considerably depending on growth conditions. Concomitantly, the taxonomic status of various species is uncertain. To confirm the taxonomic identity and to better understand the relationship within Dunaliella, seven taxa ( D. salina, D. bardawil, D. tertiolecta, D. parva, D. viridis, D. lateralis, D. peircei) were compared using RFLP analysis of the nuclear rDNA repeats, specifically the internal transcribed spacer regions, including the 5.8S rRNA gene. Volvox aureus was used as an outgroup. A single ITS PCR amplification product was obtained for each taxon. An ITS fragment of ca. 640 bp was present in all the taxa within the subgenus Dunaliella, except for D. salina CCMP 1303 (ca. 540 bp) and D. lateralis (subgenus Pascheria) (ca. 600 bp). A cluster analysis based on the presence or absence of bands generated by digestion of the PCR product with 8 restriction endonucleases (DpnI, HhaI, EcoRI, PvuII, TaqI, HaeIII, MspI, StyI) revealed no correlation between the genetic relationship inferred from the ITS-RFLP data and the morpho-physiological attributes used for taxonomy. In addition, differences in morphology, physiology and in the length and restriction fragment patterns of the ITS region of D. salina CCMP 1303 suggest that this strain does not belong to Dunaliella.
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    URL: http://dx.doi.org/10.1023/A:1008035422784
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    Photosynthate production in laboratory cultures (UV conditioned and unconditioned) of Cryptomonas erosa under simulated doses of UV radiation (1998)
    Springer
    Aquatic ecology 32 (1998), S. 297-312 
    Details
    ISSN: 1573-5125
    Keywords: cryptomonads ; macromolecular ; Phototron ; photosynthesis ; UV radiation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract We used a device called a Phototron to measure the effects of UV radiation on the cosmopolitan algae, Cryptomonas erosa, grown in continuous cultures. In the Phototron, we investigated changes in photosynthetic parameters (Pmax – specific production rate at optimal light intensity; α – initial slope of the linear portion of the Photosynthesis-Irradiance curve; and θ – the convexity or rate of bending) and carbon allocation as a function of irradiance at three different environmentally-realistic doses of UV radiation in unconditioned (no prior UV exposure) and conditioned algae (15 d previous UV exposure). For unconditioned control algae, Pmax-Total was lower, although not significantly, than the two highest UV treatments. For conditioned control algae, Pmax-Total was higher, although not significantly, than all UV treatments. Our data suggest that short term (4 h) exposure to low levels of UV (8.09 W m−2 unweighted) does not affect Pmax-Total in C. erosa, but does change the proportion of carbon allocated to lipids and proteins. Also, comparisons of lipids, polysaccharides and proteins as a percent of total carbon uptake between unconditioned and conditioned algae indicate that exposure history to UV radiation can have a negative impact on carbon allocation to lipids and proteins, in a wetland alga species that is crucial to the efficient transfer of energy through freshwater food webs.
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    URL: http://dx.doi.org/10.1023/A:1009911811188
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    Light dependency of the photosynthetic recovery of Nostoc flagelliforme (1998)
    Springer
    Journal of applied phycology 10 (1998), S. 51-53 
    Details
    ISSN: 1573-5176
    Keywords: blue-green alga ; cyanobacterium ; Fv/Fmlight ; Nostoc flagelliforme ; photosynthesis ; rewetting
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract PS II photochemical efficiency (Fv/Fm) of Nostoc flagelliforme was examined after rewetting in order to investigate the light-dependency of its photosynthetic recovery. Fv/Fm was not detected in the dark, but was immediately recognized in the light. Different levels of light irradiation (4, 40 and 400 µmol photon m2 s-1) displayed different effects on the recovery process of photosynthesis. The intermediate level led to the best recovery of photochemical efficiency; the low light required longer and the high light inhibited the extent of the recovered efficiency. It was concluded that the photosynthetic recovery of N. flagelliforme is both light-dependent and influenced by photon flux density.
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    URL: http://dx.doi.org/10.1023/A:1008011531325
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    Nitrogen availability influences the biochemical composition and photosynthesis of tank-cultivated Ulva rigida (Chlorophyta) (1998)
    Springer
    Journal of applied phycology 10 (1998), S. 383-389 
    Details
    ISSN: 1573-5176
    Keywords: ammonium ; C:N ratio ; tank culture ; dietary fibre ; fatty acids ; nitrogen ; photosynthesis ; Ulva rigida
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Physiological and biochemical changes in relation to inorganic nitrogen availability were studied for tank-cultivated Ulva rigida grown under nitrogen- enriched and nitrogen-depleted seawater. U. rigida was initially cultivated in nitrogen-enriched seawater (daily concentrations of NH4+ and NO3- + NO2- ranged between 0.5–1.7 and 0.06–0.15 mg L-1, respectively), then transferred to nitrogen-depleted seawater where photosynthetic capacity decreased to zero after 23 d. At the time (14 d) when photosynthetic rates were lower than 2.0 μmol O2 g-1 FW min-1 and strong bleaching had occurred, some algae were returned to the initial nitrogen-enriched seawater to study recovery from N-limited growth. Data on biochemical composition (chlorophylls, ash, caloric content, fatty acids and dietary fibres) and colouration varied significantly depending on the nitrogen conditions. C:N ratios correlated significantly with biochemical parameters. Fatty acid (FA) synthesis continued during the N-starvation period; saturated and mono-unsaturated FA increased to a maximun of 72.2%, while poly-unsaturated fatty acids (PUFA) decreased to 27.7%. During the N-enriched recovery period, the reverse was found. C:N ratios above 10 correlated with carbohydrate synthesis as shown by the dietary fibre level. Under nitrogen enriched conditions, C:N ratios decreased along with a decrease in fibre level. Under controlled conditions, nitrogen represents a major influence on the development of intensive tank cultivation of Ulva rigida, not only by affecting parameters closely related to nitrogen metabolism but also some clearly influenced by carbon uptake.
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    URL: http://dx.doi.org/10.1023/A:1008008912991
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    Analyses of quantitative trait loci associated with resistance to shape Sclerotinia sclerotiorum in sunflowers (shape Helianthus annuus L.) using molecular markers (1998)
    Springer
    Molecular breeding 4 (1998), S. 215-226 
    Details
    ISSN: 1572-9788
    Keywords: Helianthus annuus ; QTL ; resistance ; RFLP ; Sclerotinia scerotorum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Restriction fragment length polymorphism and isoenzyme markers were used to investigate quantitative trait loci involved in sunflower resistance to mycelial extension of Sclerotinia sclerotiorum on leaves and capitula. Seed weight, oil content and flowering data were also evaluated. Four quantitative trait loci were demonstrated for leaf resistance and two for capitulum resistance. One of these zones appears involved in resistance to both types of S. sclerotiorum attack while the others appear specific for resistance of one part of the plant. Two quantitative trait loci were detected for seed weight, three for oil content and three for flowering date. Individual quantitative trait loci explained 9% to 48% of the phenotypic variability, confirming the polygenic basis of the quantitative traits studied. Overall, the quantitative trait loci explain 60% of the genetic variation for leaf resistance and 38% for capitulum resistance to S. sclerotiorum. One linkage group is particularly interesting since it includes quantitative trait loci for all the five quantitative traits measured. Hypotheses for linkage versus pleiotropy and consequences of all the results in resistance breeding are discussed.
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    URL: http://dx.doi.org/10.1023/A:1009694626992
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    A gene for resistance to the maize streak virus in the African CIMMYT maize inbred line CML202 (1998)
    Springer
    Molecular breeding 4 (1998), S. 147-154 
    Details
    ISSN: 1572-9788
    Keywords: composite interval mapping ; maize streak virus ; QTL ; RFLP ; Zea mays
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Resistance to maize streak virus (MSV) is an essential trait of improved maize varieties in sub-Saharan Africa. We mapped quantitative trait loci (QTL) for resistance to MSV in a population of 196 F2:3 lines derived from a cross between the maize inbred lines CML202 (resistant) from CIMMYT-Zimbabwe and Lo951 (susceptible) from Italy. Field tests were planted at two locations in Zimbabwe, inoculated with viruliferous leaf hoppers (Cicadulina mbila), and scored twice (21 and 83 days after infesting, DAI) on a 1–5 scale. The mean final streak intensity (score 2) of the parent lines was 2.2 (CML202) and 4.8 (Lo951). Genotype × location interaction was large for score 1 but negligible for score 2. Consequently, the heritability was higher for score 2 (0.93) than for score 1 (0.62). By composite interval mapping across locations, using a linkage map with 110 RFLP loci, four significant (LOD ≥3.0) QTL were identified for score 1 on chromosomes (C) 1, 2, 3, and 4, respectively. All four were contributed by CML202. For score 2, only the QTL on C 1 was significant (LOD =37), explaining 59% of the phenotypic and 64% of the genotypic variance. The QTL's partially dominant gene action was consistent with the nearly intermediate resistance of the F1 generation (relative heterosis for resistance 12%). The presence of one major QTL is consistent with the bimodal frequency distribution of the mapping population showing a clear 3:1 segregation. This gene seems to be allelic or identical to Msv1, a major resistance gene which was previously identified in the same genomic region in Tzi4, an inbred line from IITA. Inbred CML202 had lower final disease ratings than Tzi4. The greater resistance of CML202 may be due to allelic differences at the msv1 locus or due to the minor QTL on C 2, 3, and 4 which were not detected in Tzi4. z y Trigo (International Maize and Wheat Improvement Center); IITA, International Institute of Tropical Agriculture; IRAT, Institute de Recherches Agronomiques Tropicales et des Cultures Vivrières; KARI, Kenya Agricultural Research Institute; MSV, maize streak virus; QTL, quantitative trait locus/loci
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    URL: http://dx.doi.org/10.1023/A:1009602620244
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