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  • 1
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    Springer
    In:  London, Springer, vol. 13, no. 3, pp. 632 pp., (ISBN-10: 1-84628-053-2, ISBN-13:978-1-84628-053-5, eISBN 1-84628-054-0, xx + 591 pp. + CD-ROM)
    Publication Date: 2006
    Keywords: Textbook of informatics ; Handbook of informatics ; compiler ; computing ; FTN ; GFZ ; M ; 06.0186 ; 000444331
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  • 2
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    In:  Basel, 404 pp., Springer, vol. 10, no. Subvol. b, pp. 220, (3-540-23810-7, XVII + 718 p., 220 illus.)
    Publication Date: 2006
    Description: The author introduces the statistical analysis of geophysical time series. The book includes also a chapter with an introduction to geostatistics, many examples and exercises which help the reader to work with typical problems
    Keywords: Textbook of geophysics ; Data analysis / ~ processing ; Time series analysis ; Statistical investigations ; Auto-Regressive Moving Average-process ; Geostatistics, ; Modeling, ; R ; programming ; language, ; Simulation, ; Statistical ; analysis
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  • 3
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    In:  Corporate, Florida, Springer, vol. Developments in Petroleum Science vol. 15B, no. Publ. No. 12, pp. 9, (3-540-24165-5, XXVI + 228 p.)
    Publication Date: 2006
    Description: This book provides a summary of geodynamic results from Iceland that presently are found in a great number of scientific articles, but have not been collected before in a book
    Keywords: Textbook of geodesy ; Crustal deformation (cf. Earthquake precursor: deformation or strain) ; Geodesy ; Plate tectonics ; GeodesyY
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  • 4
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    In:  Berlin, Springer, vol. 3, no. ALEX(01)-FR-77-01, AFTAC Contract F08606-76-C-0025, pp. 329, (ISBN: 3-540-27983-0, XII + 238 p., 77 illus., 13 in colour with CD-ROM)
    Publication Date: 2006
    Description: Contents: Data Analysis in Earth Sciences - Introduction to MATLAB - Univariate Statistics - Bivariate Statistics - Time-Series Analysis - Signal Processing - Spatial Data including Digital Elevation Models - Image Processing including Processing and Georeferencing of Satellite Images - Multivariate Statistics; IfGW Uni Potsdam
    Keywords: Data analysis / ~ processing ; Modelling ; software ; Textbook of geophysics ; Statistical investigations ; digital signal analysis (also DSP) ; DSP ; Time series analysis ; Digital elevation model ; geographic ; coordinates ; Mapping ; Toolbox
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  • 5
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    In:  Cambridge, Springer, vol. LXXVIII, no. 2, pp. 125-169, (ISBN: 3-540-42642-6, Approx. 620 p. 30 illus., Hardcover)
    Publication Date: 2006
    Keywords: Crustal deformation (cf. Earthquake precursor: deformation or strain) ; Volcanology ; Geodesy ; Global Positioning System ; InSAR ; Textbook of geodesy
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  • 6
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    In:  Boston, 362 pp., Springer, vol. 12, 135 pp., no. 85, pp. 175, (1-4020-3524-1, XXV + 543 p., with CD-ROM)
    Publication Date: 2006
    Description: This book points out the need of a multidisciplinary approach in the field of risk assessment and management. It provides an overview of the problems, approaches and common practices directly related to earthquake risk mitigation and, in particular, to the preparation of earthquake emergency plans
    Keywords: Textbook of geophysics ; Textbook of engineering ; Earthquake hazard ; Earthquake engineering, engineering seismology ; Earthquake risk ; Disaster ; management, ; Earthquake ; hazard, ; Emergency ; plans, ; Risk ; assessment ; and ; mapping, ; Seismic ; zonation, ; Vulnerability ; and ; damage
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  • 7
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    In:  Amsterdam, 490 pp., Springer, vol. 11, no. Publ. No. 12, pp. 127, (1-4020-4233-7 (hc), 1-4020-4234-5 (sc), X + 413 p.)
    Publication Date: 2006
    Description: Tectonic motion of the Adria microplate exerts a first-order control on the tectonics, geology, seismology, resource distribution, and the geological hazards across a broad zone of south-central Europe and the north-central Mediterranean... This workshop brought together a distinguished international group of scientists working in the peri-Adriatic region to: (1) review research activities and results, (2) share technical expertise, and (3) provide a springboard for future collaborative research on Adria geodynamics. Areas of agreement were identified, as well as remaining areas of debate. In addition, attention focused on important scientific questions and the potential for international and interdisciplinary research in the future
    Keywords: Plate tectonics ; Geodesy ; Tectonics ; Earthquake hazard ; Italy ; Croatia
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  • 8
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    In:  Die Naturwissenschaften, 13 (31). pp. 670-675.
    Publication Date: 2017-06-08
    Type: Article , PeerReviewed
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  • 9
    Publication Date: 2017-10-05
    Description: Silicon is one of the most important elements in the current age of the anthropocene. It has numerous industrial applications, and supports a high-tech multi-billion Euro industry. Silicon has a fascinating biological and geological cycle, interacting with other globally important biogeochemical cycles. In this review, we bring together both biological and geological aspects of the silicon cycle to provide a general, comprehensive review of the cycling of silicon in the environment. We hope this review will provide inspiration for researchers to study this fascinating element, as well as providing a background environmental context to those interested in silicon.
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  • 10
    Publication Date: 2018-03-09
    Description: Dissolved and particulate metals (Ag, Cd, Co, Cu, Ni, and Zn) and nutrients (PO4, NO3, and H4SiO4) were measured in Todos Santos Bay (TSB) in August 2005. Two sources producing local gradients were identified: one from a dredge discharge area (DDA) and another south of the port and a creek. The average concentrations of dissolved Cd and Zn (1.3 and 15.6 nM, respectively) were higher by one order of magnitude than the surrounding Pacific waters, even during upwelling, and it is attributed to the presence of a widespread and long-lasting red tide coupled with some degree of local pollution. A clear spatial gradient (10 to 6 pM), from coast to offshore, of dissolved Ag was evident, indicating the influence of anthropogenic inputs. The particulate fraction of all metals, except Cu, showed a factor of ~3 decrease in concentrations from the DDA to the interior of the bay. The metal distributions were related to the bay’s circulation by means of a numerical model that shows a basically surface-wind-driven offshore current with subsurface compensation currents toward the coast. Additionally, the model shows strong vertical currents over the DDA. Principal component analysis revealed three possible processes that could be influencing the metal concentrations within TSB: anthropogenic inputs (Cd, Ag, and Co), biological proceses (NO3, Zn, and Cu), and upwelling and mixing (PO4, H4SiO4, Cd, and Ni). The most striking finding of this study was the extremely high Cd concentrations, which have been only reported in highly contaminated areas. As there was a strong red tide, it is hypothesized that the dinoflagellates are assimilating the Cd, which is rapidly remineralized and being concentrated on the stratified surface layers.
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  • 11
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    In:  Archivum Immunologiae et Therapiae Experimentalis, 57 (6). pp. 393-407.
    Publication Date: 2017-10-11
    Description: The complement system has long been known to be a major element of innate immunity. Traditionally, it was regarded as the first line of defense against invading pathogens, leading to opsonization and phagocytosis or the direct lysis of microbes. However, from the second half of the twentieth century on, it became clear that complement is also intimately involved in the induction and “fine tuning” of adaptive B- and T-cell responses as well as lineage commitment. This growing recognition of the complement system’s multifunctional role in immunity is consistent with the recent paradigm that complement is also necessary for the successful contraction of an adaptive immune response. This review aims at giving a condensed overview of complement’s rise from a simple innate stop-and-go system to an essential and efficient participant in general immune homeostasis and acquired immunity.
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  • 12
    Publication Date: 2018-03-09
    Description: Jamaica Bay, NY, is a highly urbanized estuary within the boroughs of New York City conspicuously lacking published information on dissolved trace metal concentrations. The current study examines the distribution and cycling of trace metals in that embayment with data gathered during cruises in November 2004, April 2005, and June 2006. Most of the metal distributions (Fe, Zn, Co, Ag, Cu, Pb, Ni) in the water column are explained by the input of substantial volumes of treated wastewater effluent. However, several lines of evidence suggest that submarine groundwater discharge (SGD) is also an important source of dissolved Fe, Zn, Co, Ni, and isotopically distinct stable Pb ratios (206Pb, 207Pb, 208Pb) in the Bay. Conversely, the recirculated seawater component of SGD is an apparent sink for dissolved Mo. This study provides the first measurements of dissolved trace metals in the Jamaica Bay water column and subterranean estuary and provides evidence for trace metal input due to SGD.
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  • 13
    Publication Date: 2018-06-12
    Description: The Gakkel Ridge in the Arctic Ocean with its adjacent Nansen and Amundsen Basins is a key region for the study of mantle melting and crustal generation at ultraslow spreading rates. We use free-air gravity anomalies in combination with seismic reflection and wide-angle data to compute 2-D crustal models for the Nansen and Amundsen Basins in the Arctic Ocean. Despite the permanent pack-ice cover two geophysical transects cross both entire basins. This means that the complete basin geometry of the world’s slowest spreading system can be analysed in detail for the first time. Applying standard densities for the sediments and oceanic crystalline crust, the gravity models reveal an unexpected heterogeneous mantle with densities of 3.30 × 103, 3.20 × 103 and 3.10 × 103 kg/m3 near the Gakkel Ridge. We interpret that the upper mantle heterogeneity mainly results from serpentinisation and thermal effects. The thickness of the oceanic crust is highly variable throughout both transects. Crustal thickness of less than 1 km dominates in the oldest parts of both basins, increasing to a maximum value of 6 km near the Gakkel Ridge. Along-axis heat flow is highly variable and heat flow amplitudes resemble those observed at fast or intermediate spreading ridges. Unexpectedly, high heat flow along the Amundsen transect exceeds predicted values from global cooling curves by more than 100%.
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  • 14
    Publication Date: 2017-06-07
    Description: Live-collected samples of four common reefbuilding coral genera (Acropora, Pocillopora, Goniastrea, Porites) from subtidal and intertidal settings of Heron Reef, Great Barrier Reef, show extensive early marine diagenesis where parts of the coralla less than 3 years old contain abundant macro- and microborings and aragonite, high-Mg calcite, low-Mg calcite, and brucite cements. Many types of cement are associated directly with microendoliths and endobionts that inhabit parts of the corallum recently abandoned by coral polyps. The occurrence of cements that generally do not precipitate in normal shallow seawater (e.g., brucite, low-Mg calcite) highlights the importance of microenvironments in coral diagenesis. Cements precipitated in microenvironments may not reXect ambient seawater chemistry. Hence, geochemical sampling of these cements will contaminate trace-element and stable-isotope inventories used for palaeoclimate and dating analysis. Thus, great care must be taken in vetting samples for both bulk and microanalysis of geochemistry. Visual inspection using scanning electron microscopy may be required for vetting in many cases.
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  • 15
    Publication Date: 2017-10-06
    Description: Analysis of ten- and four-year datasets for the large, shallow, subtropical, and eutrophic Lakes Okeechobee (USA) and Taihu (China), respectively, suggest that resource-ratio explanations for cyanobacteria dominance may not apply to these two lakes. Datasets were examined to identify relationships between nutrient ratios [total nitrogen (TN):total phosphorus (TP) and ammonium (NH4+):oxidized N (NOx)] and phytoplankton community structure (as proportions of cyanobacteria and diatoms to total phytoplankton biomass). Datasets were pooled by sampling month, averaged lake-wide, and analyzed with linear regression. In Okeechobee, the cyanobacteria proportion increased and the diatom proportion decreased with increasing TN:TP. In Taihu, cyanobacteria decreased with increasing TN:TP, but the opposite trend observed for diatoms was marginally significant. Okeechobee cyanobacteria increased and diatoms decreased with increasing NH4+:NOx, but no significant relationships between phytoplankton and NH4+:NOx were observed in Taihu. Both lakes had significant relationships between phytoplankton community structure and total nutrients, but these relationships were the opposite of those expected. Relationships between phytoplankton community structure and water quality parameters from the previous month resulted in improved relationships, suggesting a predictive capability. Statistical analysis of the entire datasets (not pooled) supported these and additional relationships with other parameters, including temperature and water clarity.
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  • 16
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    In:  Environmental Science and Pollution Research, 13 (6). pp. 406-413.
    Publication Date: 2019-09-23
    Description: Background: Halogenated compounds in the atmosphere are of great environmental concern due to their demonstrated negative effect on atmospheric chemistry and climate. Detailed knowledge of the emission budgets of halogenated compounds has to be gained to understand better their specific impact on ozone chemistry and the climate. Such data are also highly relevant to guide policy decisions in connexion with international agreements about protection of the ozone layer. In selected cases, the relevance of specific emission sources for certain compounds were unclear. In this study we present new and comprehensive evidence regarding the existence and relevance of a volcanic contribution of chlorofluorocarbons (CFCs), hydrofluorocarbons (HFCs), hydrochlorofluorocarbons (HCFCs), halons (bromine containing halo(hydro)carbons), and fully fluorinated compounds (e.g. CF4 and SF6) to the atmospheric budget. Methods: In order to obtain new evidence of a volcanic origin of these compounds, we collected repeatedly, during four field campaigns covering a period of two years, gases from fumaroles discharging over a wide range of temperatures at the Nicaraguan subduction zone volcanoes Momotombo, Cerro Negro and Mombacho, and analysed them with very sensitive GC/MS systems. Results and Discussion: In most fumarolic samples certain CFCs, HFCs, HCFCs, halons, and the fully fluorinated compounds CF4 and SF6 were present above detection limits. However, these compounds occur in the fumarole gases in relative proportions characteristic for ambient air. Conclusion: This atmospheric fingerprint can be explained by variable amounts of air entering the porous volcanic edifices and successively being incorporated into the fumarolic gas discharges. Recommendation and Outlook: Our results suggest that the investigated volcanoes do not constitute a significant natural source for CFCs, HFCs, HCFCs, halons, CF4, SF6 and NF3.
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  • 17
    Publication Date: 2021-08-27
    Description: The concentration of trace elements within cephalopod statoliths can provide a record of the environmental characteristics at the time of calcification. To reconstruct accurately the environmental characteristics at the time of calcification, it is important to understand the influence of as many factors as possible. To test the hypothesis that the elemental composition of cuttlefish statoliths could be influenced by diet, juvenile Sepia officinalis were fed either shrimp Crangon sp. or fish Clupea harengus under equal temperature and salinity regimes in laboratory experiments. Element concentrations in different regions of the statoliths (core–lateral dome–rostrum) were determined using laser ablation inductively coupled plasma mass spectrometry (LA- ICPMS). The ratios of Sr/Ca, Ba/Ca, Mn/Ca and Y/Ca in the statolith’s lateral dome of shrimp-fed cuttlefish were significantly higher than in the statolith’s lateral dome of fish-fed cuttlefish. Moreover, significant differences between statolith regions were found for all analysed elements. The fact that diet adds a considerable variation especially to Sr/Ca and Ba/Ca must be taken into account in future micro-chemical statolith studies targeting cephalopod’s life history.
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  • 18
    Publication Date: 2016-09-19
    Description: The published mean δ34S values of ore-related pyrites from orogenic gold deposits of the Eastern Goldfields Province, Yilgarn Craton lie between −4‰ and +4‰. As for orogenic gold deposits worldwide, most deposits have positive means and a restricted range of δ34S values, but some have negative means and wider ranges of δ34S values. Wall-rock carbonation and back-mixing of similar-source fluids with different fluid pathways can explain some of the more negative δ34S signatures. However, structural setting appears to be the most important factor controlling ore-fluid oxidation state and hence the distribution of δ34S values in gold-related pyrites. Shear-hosted deposits appear to have experienced fluid-dominated processes such as phase separation, whereas stockwork, vein-hosted or disseminated deposits formed under conditions of greater rock buffering. At Victory-Defiance, in particular, negative δ34S values are more common in gently dipping dilational structures, compared to more compressional steeply dipping structures. It appears most likely that fluid-pressure fluctuations during fault-valve cycles establish different fluid-flow regimes in structures with different orientations. Rapid fluid-pressure fluctuations in dilational structures during seismic activity can cause partitioning of reduced gas phases from the ore fluid during extreme phase separation and hence are an effective method of ore-fluid oxidation, leading to large, local fluctuations in oxidation state. It is thus not necessary to invoke mixing with oxidised magmatic fluids to explain δ34S signatures indicative of oxidation. In any case, available, robust geochronology in the Eastern Goldfields Province does not support the direct involvement of oxidised magmatic fluids from adjacent granitic intrusions in orogenic gold genesis. Thus, negative mean δ34S values and large variations in δ34S values of ore-related pyrites in world-class orogenic gold deposits are interpreted to result from multiple mechanisms of gold precipitation from a single, ubiquitous ore fluid in varying structural settings, rather than from the involvement of oxidised ore fluids from a different source. Such signatures are indicative, but not diagnostic, of anomalously large orogenic gold systems.
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  • 19
    Publication Date: 2017-08-09
    Description: The construction of S-wave velocity models of marine sediments down to hundreds of meters below the seafloor is important in a number of disciplines. One of the most significant trends in marine geophysics is to use interface waves to estimate shallow shear velocities which play an important role in determining the shallow crustal structure. In marine settings, the waves trapped near the fluid-solid interface are called Scholte waves, and this is the subject of the study. In 1998, there were experiments on the Ninetyeast Ridge (Central Indian Ocean) to study the shallow seismic structure at the drilled site. The data were acquired by both ocean bottom seismometer and ocean bottom hydrophone. A new type of seafloor implosion sources has been used in this experiment, which successfully excited fast and high frequency (> 500 Hz) body waves and slow, intermediate frequency (〈 20 Hz) Scholte waves. The fundamental and first higher mode Scholte waves have both been excited by the implosion source. Here, the Scholte waves are investigated with a full waveform modeling and a group velocity inversion approach. Shear wave velocities for the uppermost layers of the region are inferred and results from the different methods are compared. We find that the full waveform modeling is important to understand the intrinsic attenuation of the Scholte waves between 1 and 20 Hz. The modeling shows that the S-wave velocity varies from 195 to 350 m/s in the first 16 m of the uppermost layer. Depths levels of high S-wave impedance contrasts compare well to the layer depth derived from a P-wave analysis as well as from drilling data. As expected, the P- to S-wave velocity ratio is very high in the uppermost 16 m of the seafloor and the Poisson ratio is nearly 0.5. Depth levels of high S-wave impedance contrasts are comparable to the layer depth derived from drilling data.
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  • 20
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    In:  In: High Performance Computing in Science and Engineering '08. Springer, Heidelberg, pp. 471-477613. ISBN 978-3-540-88301-2
    Publication Date: 2019-09-23
    Type: Book chapter , PeerReviewed
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  • 21
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    In:  In: Target Pattern Recognition in Innate Immunity. Advances in Experimental Medicine and Biology, 653 . Springer, Heidelberg, pp. 35-47. ISBN 978-1-4419-0900-8
    Publication Date: 2013-02-18
    Description: NOD-like receptors (NLRs) exert pivotal roles in innate immunity as sensors of exogenous or endogenous cellular danger signals. The NLR protein family has a characteristic domain architecture comprising a central nucleotide binding and oligomerization domain (NOD), an N-terminal effector binding domain and C-terminal leucine-rich repeats (LRRs). Mutations in NLR genes are genetically associated with a number of chronic inflammatory diseases of barrier organs. In this chapter, we focus on the influence of NLR regulation and function in the complex pathophysiology of mucosal homeostasis. The understanding of NLR biology may guide our future understanding of how the interaction between the human genome and the metagenome of transient and resident microbiota precipitates into chronic inflammatory disorders, such as Crohn's disease or atopy.
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  • 22
    Publication Date: 2016-09-22
    Description: Fabric and growth mode of deep-water isidid gorgonian skeletons showing bright Mg-calcitic internodes and dark proteinageous nodes were investigated on modern, subrecent and fossil skeletons. The internodial microstructure is characterised by three-dimensionally interfingering calcitic fascicles accreting around a central axis. Macroscopic colour banding results from varying orientations of organic-rich fascicle bundles and intercalated bands of organic-poor granular crystals. This skeletal structure of isidid gorgonians strikingly differs from the density banding of scleractinians. Radiocarbon dating of a fossil skeleton gave an age of 3,985±35 to 3,680±35 years before present (BP) with a record of 305±35 years (±range). Linear extension rates of 0.4 mm year−1 average allow for an annual to sub-annual resolution on micrometer scale of colour bands or fascicles, respectively. The growth mode of branched skeletons is characterised by simultaneous secretion of vertically alternating nodes/internodes and lateral accretion of concentric increments enveloping the entire skeleton. Bifurcations at various growth stages imply that adjacent branches have different ages and show varying numbers of growth bands at any skeletal cross section. The scleroprotein gorgonin plays a crucial role in the formation of organic nodes and the secretion of calcitic internodes by providing a structural framework in the biomineralisation process.
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  • 23
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    In:  In: Offshore wind energy : research on environmental impacts. , ed. by Köller, J., Köppel, J. and Peters, W. Springer, Heidelberg, pp. 65-75.
    Publication Date: 2012-02-23
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  • 24
    Publication Date: 2016-09-13
    Description: During the twentieth century sea surface temperatures in the Atlantic Ocean exhibited prominent multidecadal variations. The source of such variations has yet to be rigorously established—but the question of their impact on climate can be investigated. Here we report on a set of multimodel experiments to examine the impact of patterns of warming in the North Atlantic, and cooling in the South Atlantic, derived from observations, that is characteristic of the positive phase of the Atlantic Multidecadal Oscillation (AMO). The experiments were carried out with six atmospheric General Circulation Models (including two versions of one model), and a major goal was to assess the extent to which key climate impacts are consistent between the different models. The major climate impacts are found over North and South America, with the strongest impacts over land found over the United States and northern parts of South America. These responses appear to be driven by a combination of an off-equatorial Gill response to diabatic heating over the Caribbean due to increased rainfall within the region and a Northward shift in the Inter Tropical Convergence Zone (ITCZ) due to the anomalous cross-equatorial SST gradient. The majority of the models show warmer US land temperatures and reduced Mean Sea Level Pressure during summer (JJA) in response to a warmer North Atlantic and a cooler South Atlantic, in line with observations. However the majority of models show no significant impact on US rainfall during summer. Over northern South America, all models show reduced rainfall in southern hemisphere winter (JJA), whilst in Summer (DJF) there is a generally an increase in rainfall. However, there is a large spread amongst the models in the magnitude of the rainfall anomalies over land. Away from the Americas, there are no consistent significant modelled responses. In particular there are no significant changes in the North Atlantic Oscillation (NAO) over the North Atlantic and Europe in Winter (DJF). Additionally, the observed Sahel drying signal in African rainfall is not seen in the modelled responses. Suggesting that, in contrast to some studies, the Atlantic Multidecadal Oscillation was not the primary driver of recent reductions in Sahel rainfall.
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  • 25
    Publication Date: 2019-09-23
    Description: The genes and intergenic regions of the amoCAB operon were analyzed to establish their potential as molecular markers for analyzing ammonia-oxidizing betaproteobacterial (beta-AOB) communities. Initially, sequence similarity for related taxa, evolutionary rates from linear regressions, and the presence of conserved and variable regions were analyzed for all available sequences of the complete amoCAB operon. The gene amoB showed the highest sequence variability of the three amo genes, suggesting that it might be a better molecular marker than the most frequently used amoA to resolve closely related AOB species. To test the suitability of using the amoCAB genes for community studies, a strategy involving nested PCR was employed. Primers to amplify the whole amoCAB operon and each individual gene were tested. The specificity of the products generated was analyzed by denaturing gradient gel electrophoresis, cloning, and sequencing. The fragments obtained showed different grades of sequence identity to amoCAB sequences in the GenBank database. The nested PCR approach provides a possibility to increase the sensitivity of detection of amo genes in samples with low abundance of AOB. It also allows the amplification of the almost complete amoA gene, with about 300 bp more sequence information than the previous approaches. The coupled study of all three amo genes and the intergenic spacer regions that are under different selection pressure might allow a more detailed analysis of the evolutionary processes, which are responsible for the differentiation of AOB communities in different habitats.
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  • 26
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    In:  Polar Biology, 29 . pp. 169-178.
    Publication Date: 2021-08-27
    Description: We examined 323 cephalopods collected by bottom trawl from depths between 162 and 536 m near Disko island, West Greenland. The most abundant species were the boreoatlantic armhook squid Gonatus fabricii, the sepiolid Rossia moelleri and the spoonarm octopus Bathypolypus arcticus. From this sampling we provide new information on the population structure, bathymetric distribution and the reproductive biology of cephalopods from this area. Special emphasis is given to the sepiolid R. moelleri, for which the life cycle is proposed. Further, this study provides new relationships of beak size to mantle length and wet body mass for G. fabricii, R. moelleri and B. arcticus.
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  • 27
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    In:  Toxicology and Environmental Health Sciences, 1 (2). pp. 92-96.
    Publication Date: 2016-05-24
    Description: Semi Permeable Membrane Device (SPMD) was deployed on an experimental basis for five days inside an Environmental Chemistry Laboratory and two sites outside the building in Kiel, Germany to understand the time-averaged contaminant profiles and concentrations of PCBs. Multi Dimensional High Resolution Gas Chromatography-Electron Capture Detection technique and high resolution clean up techniques were employed to SPMD derived triolein samples. Air concentrations were derived from well established mass transfer coefficients or rate constants for PCBs in SPMD. PCBs profiles in indoor and outdoor samples were distinctly different, exemplified by a particle free clean-up laboratory facility where particle associated higher chlorinated congeners were absent. SPMDs revealed the ‘occupational hazard’ to workers inside the building from chemical contamination derived from both building materials and chemicals used in the laboratory. Finger printing technique using principle component analysis (PCA) revealed that PCB contamination was derived from German commercial PCB mixtures. SPMD derived air concentrations in outdoor samples resembled levels recorded by similar devices in Europe. Ultimately, a simple sampling technique in combination with high resolution analytical techniques demonstrated the uptake of more than 60 PCB congeners within a short period of time.
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  • 28
    Publication Date: 2015-01-29
    Description: Lipid content, fatty acid composition, and feeding activity of the dominant Antarctic copepods, Calanoides acutus, Calanus propinquus, and Metridia gerlachei, were studied at a quasi-permanent station in the eastern Weddell Sea in December 2003. During 3 weeks of the spring phytoplankton development, total lipid levels of females and copepodite stages V (CVs) of C. acutus were almost doubled. Meanwhile, only a slight increase in total lipid content occurred in M. gerlachei, and no clear trend was observed in lipids of C. propinquus females. The pronounced increase of lipids in C. acutus was due to an accumulation of wax esters. The proportion of wax esters in the lipids of M. gerlachei was clearly lower, while triacylglycerols played a more important role. In C. propinquus, triacylglycerols were the only neutral lipid class. There were no pronounced changes in the feeding activity of M. gerlachei, whereas the feeding activity of C. acutus had rapidly increased with the development of the phytoplankton bloom in December, which explains its rapid lipid accumulation. The combination of gut content and fatty acid trophic marker analyses showed that C. acutus was feeding predominantly on diatoms. The typical diatom fatty acid marker, 16:1(n-7), slightly decreased and the tracer for flagellates, 18:4(n-3), increased in females and CVs of C. acutus. This shift indicates the time, when the significance of flagellates started to increase. The three copepod species exhibited different patterns of lipid accumulation in relation to their trophic niches and different duration of their active phases. The investigations filled a crucial data gap in the seasonal lipid dynamics of dominant calanoid copepods in the Weddell Sea in December and support earlier hypotheses on their energetic adaptations and life cycle strategies.
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  • 29
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    In:  Paleontological Journal, 40 (Suppl. 2). S91-S204.
    Publication Date: 2015-03-26
    Description: This work is the first detailed description of the Late Pleistocene-Holocene and Recent Ostracoda of the Laptev Sea. A total of 45 species in 22 genera and 13 families have been identified. All these species are described monographically. Three different ecological assemblages of ostracodes corresponding to different combinations of environmental parameters have been established; they are restricted to three regions of the sea: western-central, eastern, and southern. The recent ostracode assemblages of the Laptev Sea have been compared with those from other Arctic areas and are most similar to those of the Beaufort and Kara seas. Data on recent Ostracoda are used for paleoenvironmental reconstructions on the eastern shelf and western continental slope of the Laptev Sea. For this purpose, ostracodes from five sections obtained from these parts of the sea have been examined. The oldest sediments, which are of Late Pleistocene age (15.8 cal. ka BP), have been recovered in a core from the western continental slope. These yielded five ostracode assemblages, which correspond to different paleoenvironments and replaced each other in the course of the rapid postglacial sea-level rise, thus showing variations in the Atlantic water inflow from the west and freshwater discharge from the subaerially exposed shelf. On the outer shelf of the eastern part of the sea, the rapid sea-level rise in the Early Holocene (lowermost dating 11.3 cal. ka BP) led to a rapid transition from assemblages of brackish-water near-shore environments to those of modernlike normal marine environments; modern environments were established about 8.2 cal. ka ago. Since the core sections from the inner shelf correspond to the time when the level of the sea had already reached its modern values, the changes in the taxonomic composition of ostracode assemblages primarily mirror variations in river runoff.
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  • 30
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    In:  In: The Prokaryotes : a handbook on the biology of bacteria. , ed. by Dworkin, M., Falkow, S., Rosenberg, E., Schleifer, K. H. and Stackebrandt, E. Springer, New York, USA, pp. 41-64. 3. ed. ISBN 0-387-25495-1
    Publication Date: 2015-03-02
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  • 31
    Publication Date: 2016-12-31
    Description: Chironomid, pollen, and rhizopod records from a permafrost sequence at Bol’shoy Lyakhovsky Island (New Siberian Archipelago) document the development of a thermokarst palaeo-lake and environmental conditions in the region during the last Interglacial (MIS 5e). Open Poaceae and Artemisia associations dominated vegetation at the beginning of the interglacial period. Rare shrub thickets (Salix, Betula nana, Alnus fruticosa) grew in more protected and wetter places as well. Saalian ice wedges started to melt during this time, resulting in the formation of an initial thermokarst water body. The high percentage of semi-aquatic chironomids suggests that a peatland-pool initially existed at the site. A distinct decrease in semi-aquatic chironomid taxa and an increase in lacustrine ones point to a gradual pooling of water in the basin, which could in turn induce thermokarst and create a permanent pond during the subsequent period. The highest relative abundance of Chironomus and Procladius reflects unfrozen water remaining under the ice throughout the ice-covered period during the later stage of palaeo-lake development. The chironomid record points to three successive stages during the history of the lake: (1) a peatland pool; (2) a pond (i.e., shallower than the maximum ice-cover thickness); and (3) a shallow lake (i.e., deeper than the maximum ice-cover thickness). The trend of palaeo-lake development indicates that intensive thermokarst processes occurred in the region during the last Interglacial. Shrub tundra communities with Alnus fruticosa and Betula nana dominated the vegetation during the interglacial optimum. The climate was moister and warmer than present. The results of this study suggest that quantitative chironomid-based temperature reconstructions from Arctic thermokarst ponds/lakes may be problematic due to other key environmental factors, such as prolonged periods of winter anoxia and local hydrological/geomorphological processes, controlling the chironomid assemblages.
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  • 32
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    In:  Antonie van Leeuwenhoek International Journal of General and Molecular Microbiology, 96 (4). pp. 405-411.
    Publication Date: 2015-07-03
    Description: Palytoxin (PTX), one of the most potent and chemically complex marine toxins, is predominantly found in zoanthid corals and sporadically in dinoflagellates. Its biosynthesis and metabolic pathways are largely unknown. However, the widespread occurrence of the toxin in phylogenetically distinct marine organisms is consistent with its production by microorganisms and subsequent accumulation in the food chain. To investigate a possible microbial origin, bacteria from two zoanthid corals (Palythoa caribaeorum, Zoanthus pulchellus) and one sponge (Neofibularia nolitangere) were isolated. More than 250 bacteria were screened for hemolysis using a newly developed PTX-screening assay of which 7% showed PTX-like hemolytic activity. 16S rRNA gene sequencing revealed that these bacterial isolates belonged to strains of Bacillus cereus group (n = 11) as well as the genera Brevibacterium (n = 4) and Acinetobacter (n = 2). The results indicate the presence of Na+/K+-ATPase toxins and possibly PTX in hemolytic bacteria from P. caribaeorum.
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  • 33
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    In:  International Journal of Systematic and Evolutionary Microbiology, 56 (9). pp. 2119-2124.
    Publication Date: 2018-12-18
    Description: A marine bacterium, strain Pol012T, was isolated from the Mediterranean sponge Axinella polypoides and subsequently characterized as belonging to subphylum 1 of the phylum ‘Verrucomicrobia’. Strain Pol012T was non-motile, Gram-negative, coccoid or rod-shaped and red in colour. The menaquinones MK-8 and MK-9 were detected. The G+C content of the genomic DNA was 50.9 mol%. Growth was possible at temperatures between 8 and 30 °C and at pH values between 6.8 and 8.2. The closest cultured relative of strain Pol012T was Akkermansia muciniphila (83 % sequence similarity), while the closest environmental 16S rRNA gene sequence was the marine clone Arctic96BD-2 (95 % sequence similarity). Strain Pol012T is the first marine pure-culture representative of ‘Verrucomicrobia’ subphylum 1 and represents a novel genus and species, for which the name Rubritalea marina gen. nov., sp. nov. is proposed. The type strain is Pol012T (=DSM 177716T=CIP 108984T). The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain Pol012T is DQ302104, and those for verrucomicrobial 16S rRNA gene sequences from sponges and seawater are DQ302105–DQ302120.
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  • 34
    Publication Date: 2015-09-21
    Description: Continental shelf systems are highly dynamic sedimentary environments, where sediments from biogenic production as well as from terrigenous sources are redistributed in the shelf depositional system, and partly exported off the shelf to the slope and the deep sea. The Golfe d’Arguin (Mauritania, NW Africa) is dominated by such redistribution processes, involving clastic silt imported as dust from the Sahara desert and biogenic carbonates of marine origin. Indeed, surface-sediment grain size and mineralogy show a clear north–south partitioning of sediment type. Fine material is winnowed from the northern part of the gulf, and transported toward the southern part off the Banc d’Arguin, where coarse silt settles on the outer shelf and upper slope, at least down to 600 m water depth. Particles of the fine silt fraction, estimated in terms of eolian material collected aboard the research vessel, are thought to be exported further offshore as they correspond to grain sizes previously reported from adjacent deep-sea sediments. These findings suggest that the interpretation of dust records from the continental slope and rise off NW Africa must consider reworking and partitioning processes active on the Mauritanian shelf.
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  • 35
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    In:  In: The Prokaryotes : a handbook on the biology of bacteria. , ed. by Dworkin, M., Falkow, S., Rosenberg, E., Schleifer, K. H. and Stackebrandt, E. Springer, New York, USA, pp. 593-601. 3. ed. ISBN 0-387-25495-1
    Publication Date: 2015-03-02
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  • 36
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    Springer
    In:  In: The Prokaryotes : a handbook on the biology of bacteria. , ed. by Dworkin, M., Falkow, S., Rosenberg, E., Schleifer, K. H. and Stackebrandt, E. Springer, New York, USA, pp. 874-886. 3. ed. ISBN 0-387-25495-1
    Publication Date: 2015-03-02
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  • 37
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    In:  In: The Prokaryotes : a handbook on the biology of bacteria. , ed. by Dworkin, M., Falkow, S., Rosenberg, E., Schleifer, K. H. and Stackebrandt, E. Springer, New York, USA, pp. 846-873. 3. ed. ISBN 0-387-25495-1
    Publication Date: 2015-03-02
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  • 38
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    In:  Environmental Earth Sciences, 59 (2). pp. 485-487.
    Publication Date: 2018-09-12
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  • 39
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    In:  The European Physical Journal Special Topics, 174 (1). pp. 99-111.
    Publication Date: 2020-03-20
    Description: We examine a statistical model for the description of the seasonal variation of extreme daily precipitation at 689 stations across the UK. The probability distribution for monthly maximum precipitation intensity is modelled with a generalised extreme-value distribution (GEV). Instead of modelling the distribution of precipitation maxima separately for every month, we propose an overall model with seasonally-varying location and scale parameters and a constant shape parameter. This model is tested against an augmented version with the shape parameter allowed to vary as well. Furthermore, we compare model adequacy for block length of one and two month and found no major improvements for the longer block-length. Based on this model, the 10 and 100-year return levels are calculated conditioned on the month of the year. The interpolation of return levels to a complete coverage of the UK allows for an identification of spatial patterns and their temporal evolution. These patterns suggest that different mechanisms for extreme precipitation are dominant in different regions of the UK.
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  • 40
    Publication Date: 2018-06-07
    Description: Otolith microchemistry is widely used as a tool to track individual migration pathways of diadromous fish under the assumption that the elemental composition of fish otoliths is directly influenced by the physicochemical properties of the surrounding water. Nevertheless, several endogenous factors are reported to affect element incorporation into fish otoliths and might lead to misinterpretations of migration studies. This study experimentally examined the influence of eight different diets on the microchemical composition of European eel (Anguilla anguilla) otoliths using laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS). Seven natural prey types and one artificial diet were fed during 8 weeks in freshwater circuits. Results show for the first time that food has no significant influence on the incorporation of Na, Sr, Ba, Mg, Mn, Cu and Y into European eel otoliths. This indicates that the incorporation of elements usually chosen for migration studies is not affected by diet and that individual feeding behaviour of A. anguilla will not lead to any misinterpretation of migration pathways.
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  • 41
    Publication Date: 2017-05-24
    Description: Bacterial strains UST030701-097T and UST030701-084T were isolated from a marine sponge in the Bahamas. Both strains were pink-pigmented, Gram-negative, strictly aerobic and chemo-organotrophic. Cells of strain UST030701-097T were short, curved rods with fast-gliding motility, whereas those of strain UST030701-084T were straight rods with a less rapid gliding motion. The two strains had MK-7 as the major respiratory quinone and did not produce flexirubin-type pigments. The DNA G+C contents of strains UST030701-097T and UST030701-084T were 42.5 and 43.7 mol%, respectively. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the two strains belonged to the family 'Flexibacteraceae' of the phylum Bacteroidetes. 16S rRNA gene sequence similarity between strains UST030701-097T and UST030701-084T was 95.0 %; their closest relative was [Marinicola] seohaensis, with 93.3 % and 96.0 % sequence similarity, respectively. Phylogenetic tree topology indicated that the two strains belonged to the same lineage, but were on separate branches. Whilst strain UST030701-084T and [Marinicola] seohaensis were found on one branch, strain UST030701-097T was in another branch that had no species with validly published names. Based on the polyphasic taxonomic data obtained in the present study, we propose that strain UST030701-097T represents a novel genus and that strain UST030701-084T represents a novel species in the phylum Bacteroidetes. The genus Fabibacter gen. nov. is proposed, with strain UST030701-097T (=NRRL B-41220T=JCM 13334T) as the type strain of the type species, Fabibacter halotolerans sp. nov. Strain UST030701-084T (=NRRL B-41219T=JCM 13337T) is proposed as the type strain of Roseivirga spongicola sp. nov. In an earlier study, it was suggested that the genus Marinicola is a later heterotypic synonym of the genus Roseivirga. However, a formal proposal to reclassify [Marinicola] seohaensis, the only member of the genus Marinicola, has not yet been made. The results of phylogenetic analyses in this study support the reclassification of [Marinicola] seohaensis as Roseivirga seohaensis comb. nov.
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  • 42
    Publication Date: 2017-05-23
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  • 43
    Publication Date: 2018-07-02
    Description: Seawater samples were collected biweekly from the northern Gulf of Aqaba, Red Sea, for Phytoplankton analysis during the period May 1998 to October 1999. Microscopic counts and HPLC methods were employed. Procaryotic and eucaryotic ultraplankton dominated throughout most of the year, with larger nano- and microplankton making up only 5% of the photosynthetic biomass. Moderate seasonal variations in the 0–125 m integrated Chl a contrasted with a pronounced seasonal succession of the major taxonomic groups, reflecting the changes in the density stratification of the water column: Prochlorococcus dominated during the stratified summer period and were almost absent in winter. Chlorophyceae and Cryptophyceae were dominant during winter mixing but scarce or absent during summer. Diatoms and Synechococcus showed sharp and moderate biomass peaks in late winter and spring respectively, but remained at only low Chl a levels for the rest of the year. Chrysophyceae, Prymnesiophyceae and the scarce Dinophyceae showed no clear seasonal distribution pattern. The implications of alternating procaryotic and eucaryote dominated algal communities for the Red Sea pelagic food web are discussed.
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  • 44
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    In:  In: Earth system science in the Anthropocene. , ed. by Ehlers, E. and Krafft, T. Springer, Berlin [u.a.], pp. 187-202.
    Publication Date: 2012-02-23
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  • 45
    Publication Date: 2017-02-07
    Description: Series of sensitivity tests were performed with a z-coordinate, global eddy-permitting (1/4°) ocean/sea-ice model (the ORCA-R025 model configuration developed for the DRAKKAR project) to carefully evaluate the impact of recent state-of-the-art numerical schemes on model solutions. The combination of an energy–enstrophy conserving (EEN) scheme for momentum advection with a partial step (PS) representation of the bottom topography yields significant improvements in the mean circulation. Well known biases in the representation of western boundary currents, such as in the Atlantic the detachment of the Gulf Stream, the path of the North Atlantic Current, the location of the Confluence, and the strength of the Zapiola Eddy in the south Atlantic, are partly corrected. Similar improvements are found in the Pacific, Indian, and Southern Oceans, and characteristics of the mean flow are generally much closer to observations. Comparisons with other state-of-the-art models show that the ORCA-R025 configuration generally performs better at similar resolution. In addition, the model solution is often comparable to solutions obtained at 1/6 or 1/10° resolution in some aspects concerning mean flow patterns and distribution of eddy kinetic energy. Although the reasons for these improvements are not analyzed in detail in this paper, evidence is shown that the combination of EEN with PS reduces numerical noise near the bottom, which is likely to affect current–topography interactions in a systematic way. We conclude that significant corrections of the mean biases presently seen in general circulation model solutions at eddy-permitting resolution can still be expected from the development of numerical methods, which represent an alternative to increasing resolution.
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  • 46
    Publication Date: 2019-09-23
    Description: Low pO(2) values have been measured in the perivitelline fluids (PVF) of marine animal eggs on several occasions, especially towards the end of development, when embryonic oxygen consumption is at its peak and the egg case acts as a massive barrier to diffusion. Several authors have therefore suggested that oxygen availability is the key factor leading to hatching. However, there have been no measurements of PVF pCO(2) so far. This is surprising, as elevated pCO(2) could also constitute a major abiotic stressor for the developing embryo. As a first attempt to fill this gap in knowledge, we measured pO(2), pCO(2) and pH in the PVF of late cephalopod (Sepia officinalis) eggs. We found linear relationships between embryo wet mass and pO(2), pCO(2) and pH. pO(2) declined from 〉 12 kPa to less than 5 kPa, while pCO(2) increased from 0.13 to 0.41 kPa. In the absence of active accumulation of bicarbonate in the PVF, pH decreased from 7.7 to 7.2. Our study supports the idea that oxygen becomes limiting in cephalopod eggs towards the end of development; however, pCO(2) and pH shift to levels that have caused significant physiological disturbances in other marine ectothermic animals. Future research needs to address the physiological adaptations that enable the embryo to cope with the adverse abiotic conditions in their egg environment.
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  • 47
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    In:  In: High Performance Computing on Vector Systems 2009. , ed. by Resch, M., Roller, S., Benkert, K., Galle, M., Bez, W. and Kobayashi, H. Springer, Berlin, pp. 191-198. ISBN 978-3642039126
    Publication Date: 2012-07-05
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  • 48
    Publication Date: 2017-02-07
    Description: Numerical models are used to estimate the meridional overturning and transports along the paths of two hydrographic cruises, carried out in 1997 and 2002 from Greenland to Portugal. We have examined the influence of the different paths of the two cruises and found that it could explain 0.4 to 2 Sv of difference in overturning (the precise value is model-dependent). Models show a decrease in the overturning circulation between 1997 and 2002, with different amplitudes. The CLIPPER ATL6 model reproduces well the observed weakening of the overturning in density coordinates between the cruises; in the model, the change is due to the combination of interannual and high-frequency forcing and internal variability associated with eddies and meanders. Examination of the z-coordinate overturning reveals model–data discrepancies: the vertical structure in the models does not change as much as the observed one. The East Greenland current variability is mainly wind-forced in the ATL6 model, while fluctuations due to eddies and instabilities explain a large part of the North Atlantic Current variability. The time-residual transport of dense water and heat due to eddy correlations between currents and properties is small across this section, which is normal to the direction of the main current.
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  • 49
    Publication Date: 2017-05-24
    Description: A brown-coloured bacterium was isolated from photoheterotrophic (benzoate) enrichments of flooded paddy soil from Andhra Pradesh, India. On the basis of 16S rRNA gene sequence analysis, strain JA2(T) was shown to belong to the class Betaproteobacteria, related to Rubrivivax gelatinosus (99 % sequence similarity). Cells of strain JA2(T) are Gram-negative, motile rods with monopolar single flagella. The strain contained bacteriochlorophyll a and most probably the carotenoids spirilloxanthin and sphaeroidene, but did not have internal membrane structures. Intact cells had absorption maxima at 378, 488, 520, 590, 802 and 884 nm. No growth factors were required. Strain JA2(T) grew on benzoate, 2-aminobenzoate (anthranilate), 4-aminobenzoate, 4-hydroxybenzoate, phthalate, phenylalanine, trans-cinnamate, benzamide, salicylate, cyclohexanone, cyclohexanol and cyclohexane-2-carboxylate as carbon sources and/or electron donors. The DNA G+C content was 74.9 mol%. Based on DNA-DNA hybridization studies, 16S rRNA gene sequence analysis and morphological and physiological characteristics, strain JA2(T) is different from representatives of other photosynthetic species of the Betaproteobacteria and was recognised as representing a novel species, for which the name Rubrivivax benzoatilyticus sp. nov. is proposed. The type strain is JA2(T) (=ATCC BAA-35(T)=JCM 13220(T)=MTCC 7087(T)).
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  • 50
    Publication Date: 2019-07-31
    Description: Various cnidarians have adapted their life style to interstitial habitats of marine sediments. Recently, for the first time a hydroid was reported from the interstitial brine channel system of Arctic fast ice. Due to its derived features, the new genus and species Sympagohydra tuuli was introduced. Here we describe findings of S. tuuli in sea ice at several sites within the central Arctic Ocean. In our view the results of this study do not allow assignment of Sympagohydra to any known family and we, therefore, suggest the introduction of a new family Sympagohydridae which is placed within the hydrozoan subclass Hydroidolina, order Anthomedusae, suborder Capitata. A first detailed histological analysis of S. tuuli is presented. In vivo analysis of locomotion and reproduction revealed a remarkable convergent evolution in S. tuuli and distant meiobenthic relatives. Shared traits are a flagellated epidermis enabling the animals to glide within small interstices by means of flagellar beating as well as an internalised embryogenesis. In S. tuuli gametogenesis occurs in the absence of gonophores inbetween gastro- and epidermis clearly separated from the epidermis. Budding was observed as the vegetative mode of reproduction. Documentation of feeding behaviour identified copepod nauplii and rotifers as prey items and demonstrates a high trophical position of the hydroids within the sympagic food web. Occurrence of reproducing individuals and pronounced tolerances towards changing temperatures and salinities indicate S. tuuli as a truly sympagic species.
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  • 51
    Publication Date: 2016-09-21
    Description: Klyuchevskoy volcano, in Kamchatka’s subduction zone, is one of the most active arc volcanoes in the world and contains some of the highest δ18O values for olivines and basalts. We present an oxygen isotope and melt inclusion study of olivine phenocrysts in conjunction with major and trace element analyses of 14C- and tephrochronologically-dated tephra layers and lavas spanning the eruptive history of Klyuchevskoy. Whole-rock and groundmass analyses of tephra layers and lava samples demonstrate that both high-Mg (7–12.5 wt% MgO) and high-Al (17–19 wt% Al2O3, 3–6.5 wt% MgO) basalt and basaltic andesite erupted coevally from the central vent and flank cones. Individual and bulk olivine δ18O range from normal MORB values of 5.1‰ to values as high as 7.6‰. Likewise, tephra and lava matrix glass have high-δ18O values of 5.8–8.1‰. High-Al basalts dominate volumetrically in Klyuchevskoy’s volcanic record and are mostly high in δ18O. High-δ18O olivines and more normal-δ18O olivines occur in both high-Mg and high-Al samples. Most olivines in either high-Al or high-Mg basalts are not in oxygen isotopic equilibrium with their host glasses, and Δ18Oolivine–glass values are out of equilibrium by up to 1.5‰. Olivines are also out of Fe–Mg equilibrium with the host glasses, but to a lesser extent. Water concentrations in olivine-hosted melt inclusions from five tephra samples range from 0.4 to 7.1 wt%. Melt inclusion CO2 concentrations vary from below detection (〈50 ppm) to 1,900 ppm. These values indicate depths of crystallization up to ~17 km (5 kbar). The variable H2O and CO2 concentrations likely reflect crystallization of olivine and entrapment of inclusions in ascending and degassing magma. Oxygen isotope and Fe–Mg disequilibria together with melt inclusion data indicate that olivine was mixed and recycled between high-Al and high-Mg basaltic melts and cumulates, and Fe–Mg and δ18O re-equilibration processes were incomplete. Major and trace elements in the variably high-δ18O olivines suggest a peridotite source for the parental magmas. Voluminous, highest in the world with respect to δ18O, and hydrous basic volcanism in Klyuchevskoy and other Central Kamchatka depression volcanoes is explained by a model in which the ascending primitive melts that resulted from the hydrous melt fluxing of mantle wedge peridotite, interacted with the shallow high-δ18O lithospheric mantle that had been extensively hydrated during earlier times when it was part of the Kamchatka forearc. Following accretion of the Eastern Peninsula terrains several million years ago, a trench jump eastward caused the old forearc mantle to be beneath the presently active arc. Variable interaction of ascending flux-melting-derived melts with this older, high-δ18O lithospheric mantle has produced mafic parental magmas with a spectrum of δ18O values. Differentiation of the higher δ18O parental magmas has created the volumetrically dominant high-Al basalt series. Both basalt types incessantly rise and mix between themselves and with variable in δ18O cumulates within dynamic Klyuchevskoy magma plumbing system, causing biannual eruptions and heterogeneous magma products.
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  • 52
    Publication Date: 2018-01-19
    Description: Preselected cyanobacterial strains (available from culture collections and our own isolates), belonging primarily to the heterocystous cluster, were screened for inhibitors against butyrylcholinesterase. About one-half of the extracts exhibited inhibitory activity. Nostocarboline, the responsible metabolite in Nostoc 78–12A, was studied in more detail as an acetylcholinesterase (AChE) inhibitor. The compound showed potent activity against this enzyme (IC50 = 5.3 µM), and the Michaelis-Menten kinetics indicated a non-competitive component in the inhibitory mechanism. In addition, nostocarboline turned out to be a potent inhibitor of trypsin (IC50 = 2.8 µM), and thus is the first described cyanobacterial serine protease inhibitor of an alkaloid structure. The function of nostocarboline in aquatic ecosystems and its potential as a lead compound for the development of useful therapeutic AChE inhibitors is discussed.
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  • 53
    Publication Date: 2017-10-05
    Description: The species diversity of the pelagic microcopepod family Oncaeidae collected with nets of 0.1-mm mesh size was studied at 6 stations along a west-to-east transect in the Mediterranean Sea down to a maximum depth of 1,000 m. A total of 27 species and two form variants have been identified, including three new records for the Mediterranean. In addition, about 20, as yet undescribed, new morphospecies were found (mainly from the genera Epicalymma and Triconia) which need to be examined further. The total number of identified oncaeid species was similar in the Western and Eastern Basins, but for some cooccurring sibling species, the estimated numerical dominance changed. The deep-sea fauna of Oncaeidae, studied at selected depth layers between 400 m and the near-bottom layer at 〉4,200 m depth in the eastern Mediterranean (Levantine Sea), showed rather constant species numbers down to ∼3,000 m depth. In the near-bottom layers, the diversity of oncaeids declined and species of Epicalymma strongly increased in numerical importance. The taxonomic status of all oncaeid species recorded earlier in the Mediterranean Sea is evaluated: 19 out of the 46 known valid oncaeid species are insufficiently described, and most of the taxonomically unresolved species (13 species) have originally been described from this area (type locality). The deficiencies in the species identification of oncaeids cast into doubt the allegedly cosmopolitan distribution of some species, in particular those of Mediterranean origin. The existing identification problems even of well-described oncaeid species are exemplified for the Oncaea mediacomplex, including O. media Giesbrecht, O. scottodicarloi Heron & Bradford-Grieve, and O. waldemari Bersano & Boxshall, which are often erroneously identified as a single species (O. media). The inadequacy in the species identification of Oncaeidae, in particular those from the Atlantic and Mediterranean, is mainly due to the lack of reliable identification keys for Oncaeidae in warm-temperate and/or tropical seas. Future efforts should be directed to the construction of identification keys that can be updated according to the latest taxonomic findings, which can be used by the non-expert as well as by the specialist. The adequate consideration of the numerous, as yet undescribed, microcopepod species in the world oceans, in particular the Oncaeidae, is a challenge for the study of the structure and function of plankton communities as well as for global biodiversity estimates.
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  • 54
    Publication Date: 2017-01-31
    Description: The feeding selectivity and the growth and reproductive success of the copepod Acartia tonsa have been studied in mesocosms fertilized at different Si:N ratios (0-1.75:1) and, therefore, at different compositions of the phytoplankton communities. Phytoplankton composition showed a strong response to nutrient ratios, with diatoms comprising > 90% at Si:N ratios > 1:1 of total biomass as opposed to 〈 20% at the lowest ratio. A. tonsa strongly preferred feeding on motile prey (flagellates and ciliates) to feeding on diatoms. Nevertheless, diatoms comprised a substantial part of the diet at the highest Si:N ratios. A. tonsa egg production and the final (after 4 weeks) abundance of adults and copepodites showed no response to Si:N ratios while nauplii production slightly increased with Si:N ratios. It is concluded that the frequently reported deleterious effect of diatoms on copepod reproduction is rather unusual when copepods are confronted with a naturally diverse phytoplankton assemblage instead of clonal cultures in the laboratory.
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  • 55
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    In:  In: Submarine Mass Movements and Their Consequences. , ed. by Mosher, D. Advances in Natural and Technological Hazards Research, 28 . Springer, Berlin, pp. 279-287. ISBN 978-90-481-3070-2
    Publication Date: 2012-02-23
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  • 56
    Publication Date: 2018-07-02
    Description: Spatial and temporal changes of the copepod community have been investigated and related to the environmental variability of the Balearic Sea (Western Mediterranean). The period studied spans from 1994 to 1999 during which we analyzed the abundance and structure copepod variability over a cross-shore transect. Results showed a close link between hydrological changes and the variations of copepod abundance. The synchronous variability of copepods and hydrography indicated the rapid response of this zooplankton group to the inflow of cold and warm water masses coming through the study area. Cluster analysis revealed four main copepod assemblages that distinguished the coastal from the oceanic species and those species with different water masses preference. The copepod assemblage composed of Calanus helgolandicus, Clausocalanus arcuicornis, C. pergens, C. paululus, Calocalanus tenuis and Pleuromamma gracilis was associated with cool salty waters, whereas the assemblage formed by Temora stylifera, C. pavo, C. styliremis, Centropages bradyi and Acartia danae was related to warmer less saline Mediterranean waters. Moreover, it is suggested that changes in sea water temperature and salinity are linked to large-scale changes likely occurring at a basin scale, which is reflected in the Western Mediterranean mesoscale hydrographic changes. Therefore, it is stressed that changes in the Balearic copepod community can be used as potential tracers of the western Mediterranean water masses
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  • 57
    Publication Date: 2019-09-23
    Description: Precise U–Pb geochronology, Hf isotope compositions and trace element distributions in zircons are combined in the present study to define the timing and sources of the magmatism forming the Medet porphyry copper deposit, Bulgaria. ID-TIMS U–Pb-zircon dating demonstrates that ore-bearing magmatism extended for less than 1.12 Ma. As inferred from the field relationships, it started with the intrusion of a quartz-monzodiorite at 90.59 ± 0.29 Ma followed by granodiorite porphyries at 90.47 ± 0.30 and 90.27 ± 0.60 Ma and by crosscutting aplite dykes at 90.12 ± 0.36 Ma. These units were overprinted by potassic alteration and host economic copper-(Mo–Au) mineralization. The main magmatic–hydrothermal activity ceased after that, and a later quartz-granodiorite porphyry dyke, dated at 89.26 ± 0.32 Ma, only contains an uneconomic quartz–pyrite mineralization. Assimilation of Lower Paleozoic rocks with a mantle to mantle–crust signature is characteristic of the fertile magma in the Medet deposit, as defined by positive ɛ-Hf values of the inherited zircons. The positive Ce-anomalies and the higher Eu/Eu* ratios of the zircons in the mineralized Cretaceous rocks of Medet deposit argue for crystallization from a generally more oxidized magma compared to the later quartz-granodiorite porphyry dyke. A change in paleostress conditions occurred during the intrusion of the Medet pluton and its dykes. The initial stage reveals E–W extension associated with N–S compression, whereas the younger granodiorite dyke was emplaced during subsequent N–S extension. The large-scale switch of the extensional stress regime during the mineralization was favourable for ore deposition by channelling the fluids and increasing the effective permeability.
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  • 58
    Publication Date: 2019-09-23
    Description: We analyzed the seasonal variations of the ctenophore Mnemiopsis leidyi weekly collected since its first record in the western Baltic Sea in October 2006. The distribution pattern together with the seasonal dynamics and population outbreaks in late summer 2007 indicate recent successfully establishment of M. leidyi in this area. Seasonal changes showed two periods of high reproductive activity characterized by a population structure dominated by small size classes, followed by an increase of larger ones. These results further revealed that the bulk of the population remains in deep layers during the periods of low population density, whereas it appeared situated in upper layers during the proliferation of the species. We further emphasized the strength of the population outbreaks, which can reach abundances 〉10-fold higher in time periods shorter than a week. The predatory impact this species may have in pelagic ecosystems warns on the importance of its recent range of expansion.
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  • 59
    Publication Date: 2017-05-24
    Description: Strain UST040317-058(T), comprising non-pigmented, rod-shaped, facultatively anaerobic, Gram-negative cells that are motile by means of single polar flagella, was isolated from the surface of a marine sponge (Ircinia dendroides) collected from the Mediterranean Sea. Comparative 16S rRNA gene sequence-based phylogenetic analysis placed the strain in a separate cluster with the recognized bacterium Shewanella algae IAM 14159(T), with which it showed a sequence similarity of 95.0 %. The sequence similarity between strain UST040317-058(T) and its other (six) closest relatives ranged from 91.6 to 93.8 %. Strain UST040317-058(T) showed oxidase, catalase and gelatinase activities. The typical respiratory quinones for shewanellas, menaquinone MK-7 and ubiquinones Q-7 and Q-8, were also detected. The predominant fatty acids in strain UST040317-058(T) were i15 : 0, 16 : 0, 17 : 1omega8c and summed feature 3 (comprising i15 : 0 2-OH and/or 16 : 1omega7c), altogether representing 56.9 % of the total. The DNA G+C content was 39.9 mol%. The strain could be differentiated from other Shewanella species by its inability to reduce nitrate or produce H(2)S and by 10-22 additional phenotypic characteristics. On the basis of the phylogenetic and phenotypic data presented in this study, strain UST040317-058(T) represents a novel species in the genus Shewanella, for which the name Shewanella irciniae sp. nov. is proposed. The type strain is UST040317-058(T) (=JCM 13528(T)=NRRL B-41466(T)).
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  • 60
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    In:  In: Ocean weather forecasting. , ed. by Chassignet, E. and Verron, J. Springer, Dordrecht, pp. 525-547. ISBN 1-402-03981-6
    Publication Date: 2012-02-23
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  • 61
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    In:  In: Progress in marine conservation in Europe. , ed. by Nordheim, H., Boedeker, D. and Krause, J. G. Springer, Berlin [u.a.], pp. 179-188. ISBN 3-540-33290-1
    Publication Date: 2012-02-23
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  • 62
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    Springer
    In:  In: Marine Hard Bottom Communities: patterns, dynamics, diversity, and change. , ed. by Wahl, M. Springer Series: Ecological Studies, 206 . Springer, Heidelberg, pp. 61-72. ISBN 978-3-540-92703-7
    Publication Date: 2012-07-05
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  • 63
    Publication Date: 2019-08-29
    Description: Four Paraeuchaeta species and three aetideids were frequently encountered along 51°30′S in the Atlantic sector of the Southern Ocean. Paraeuchaeta antarctica was most abundant close to the Antarctic Polar Front. Within the genera Paraeuchaeta and Gaetanus, congeners usually partitioned the water column. Euchaetidae had high lipid (≤37% dry mass, DM in adult females) and wax ester contents (≤22% DM). Fatty acid composition of Paraeuchaeta spp. was dominated by monounsaturated moieties, especially 16:1(n-7) and 18:1(n-9), while fatty alcohols were mainly saturated. Surprisingly, only the bathypelagic P. barbata contained moderate amounts of 20:1(n-9) and 22:1(n-11) fatty acids (≤14%) and high levels of the respective fatty alcohols (≤50%), generally considered trophic biomarkers for calanid copepods as prey. Thus, herbivorous calanid copepods seem to be a readily available prey source at bathypelagic depths, indicating that their seasonal vertical migration provides a “trophic shortcut” from primary production at the surface to the interior of the ocean. Aetideidae also contained substantial levels of total lipid (14–36% DM), but wax esters contributed only up to 12% DM in copepodite stages C5 of Gaetanus spp., whereas other stages of Gaetanus and Aetideopsis minor only contained ≤6% DM of wax esters. The fatty acid compositions of Aetideidae were more balanced with 16:0, 18:1(n-9), 20:5(n-3), and 22:6(n-3) as important components, indicating a generally omnivorous feeding behaviour.
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  • 64
    Publication Date: 2019-09-23
    Description: Bacteria associated with the marine macroalga Laminaria saccharina, collected from the Kiel Fjord (Baltic Sea, Germany), were isolated and tested for antimicrobial activity. From a total of 210 isolates, 103 strains inhibited the growth of at least one microorganism from the test panel including Gram-negative and Gram-positive bacteria as well as a yeast. Most common profiles were the inhibition of Bacillus subtilis only (30%), B. subtilis and Staphylococcus lentus (25%), and B. subtilis, S. lentus, and Candida albicans (11%). In summary, the antibiotic-active isolates covered 15 different activity patterns suggesting various modes of action. On the basis of 16S rRNA gene sequence similarities >99%, 45 phylotypes were defined, which were classified into 21 genera belonging to Alphaproteobacteria, Betaproteobacteria, Gammaproteobacteria, Bacteroidetes, Firmicutes, and Actinobacteria. Phylogenetic analysis of 16S rRNA gene sequences revealed that four isolates possibly represent novel species or even genera. In conclusion, L. saccharina represents a promising source for the isolation of new bacterial taxa and antimicrobially active bacteria.
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  • 65
    Publication Date: 2019-02-04
    Description: Variabilities in the responses of several South African red and green macroalgae to direct grazing and the responses of one green alga to cues from grazers were tested. We used two feeding experiments: (1) testing the induced responses of three red and one green algae to direct grazing by mesograzers and (2) a multi-treatment experiment, in which the direct and indirect effects of one macrograzer species on the green alga Codium platylobium were assessed. Consumption rates were assessed in feeding assays with intact algal pieces and with agar pellets containing non-polar extracts of the test algae. Defensive responses were induced for intact pieces of Galaxaura diessingiana, but were not induced in pellets, suggesting either morphological defence or chemical defence using polar compounds other than polyphenols. In contrast, exposure to grazing stimulated consumption of Gracilaria capensis and Hypnea spicifera by another grazing species. In the multi-treatment experiment, waterborne cues from both grazing and non-grazing snails induced defensive algal traits in C. platylobium. We suggest that inducible defences among macroalgae are not restricted to brown algae, but that both the responses of algae to grazers and of grazers to the defences of macroalgae are intrinsically variable and complex.
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  • 66
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    In:  In: Marine geochemistry. , ed. by Schulz, H. D. and Zabel, M. Springer, Berlin [u.a.], pp. 207-234.
    Publication Date: 2019-09-23
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  • 67
    Publication Date: 2016-09-13
    Description: We present and describe in detail the advantages and limitations of a technique that combines in an optimal way model results and proxy-data time series in order to obtain states of the climate system consistent with model physics, reconstruction of past radiative forcing and proxy records. To achieve this goal, we select among an ensemble of simulations covering the last millennium performed with a low-resolution 3-D climate model the ones that minimise a cost function. This cost function measures the misfit between model results and proxy records. In the framework of the tests performed here, an ensemble of 30 to 40 simulations appears sufficient to reach reasonable correlations between model results and reconstructions, in configurations for which a small amount of data is available as well as in data-rich areas. Preliminary applications of the technique show that it can be used to provide reconstructions of past large-scale temperature changes, complementary to the ones obtained by statistical methods. Furthermore, as model results include a representation of atmospheric and oceanic circulations, it can be used to provide insights into some amplification mechanisms responsible for past temperature changes. On the other hand, if the number of proxy records is too low, it could not be used to provide reconstructions of past changes at a regional scale.
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  • 68
    Publication Date: 2017-05-24
    Description: A yellow-pigmented, Gram-negative, rod-shaped, strictly aerobic bacterium (strain UST050418-085(T)) was isolated from the surface of a marine sponge, Myxilla incrustans, at Friday Harbor, WA, USA. The DNA G+C content of this strain was 34.6 mol%. The predominant fatty acids were i15 : 0, a15 : 0, i15 : 1, i16 : 0, i17 : 0 3-OH, 17 : 0 2-OH and summed feature 3, comprising i15 : 0 2-OH and/or 16 : 1omega7c (altogether representing 69.0 % of the total fatty acids). MK-6 was the only respiratory quinone detected. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the closest relatives of UST050418-085(T) were members of the genus Gillisia, with sequence similarities of 93.2-96.6 %. Strain UST050418-085(T) differed from its closest relatives by 11 to 18 phenotypic traits. Molecular evidence and phenotypic characteristics suggest that strain UST050418-085(T) represents a novel species within the genus Gillisia. The name Gillisia myxillae sp. nov. is proposed, with UST050418-085(T) (=JCM 13564(T)=NRRL B-41416(T)) [corrected] as the type strain
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  • 69
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    Microbiology Society
    In:  International Journal of Systematic and Evolutionary Microbiology, 56 . pp. 1945-1951.
    Publication Date: 2017-05-29
    Description: A novel purple sulfur bacterium, strain WS(T), was isolated from a microbial mat from an estuary of the White Sea. Individual cells are coccoid shaped, motile by flagella and do not contain gas vesicles. The mean cell diameter is 1.85 mum (range 1.5-2.0 mum). Cell suspensions exhibit a purple-violet colour. They contain bacteriochlorophyll a and carotenoids of the rhodopinal series as photosynthetic pigments. The novel bacterium is an anoxygenic photoautotroph, using sulfide, thiosulfate, sulfite and elemental sulfur as electron donors for photosynthesis and is capable of photoassimilating several organic carbon sources in the presence of carbonate and a reduced sulfur source (sulfide and/or thiosulfate). Sulfur globules, formed during oxidation of sulfide, are stored transiently inside the cells. Optimal salinity and pH for growth are at 0.5-2.0 % NaCl and pH 7.0-7.5. The DNA base composition of strain WS(T) is 61.8 mol% G+C. 16S rRNA gene sequence analysis showed that the new isolate belongs to the genus Thiorhodococcus, with Thiorhodococcus minor CE2203(T) as the nearest relative (sequence similarity of 97.3 %). Several distinct differences from described species necessitate the description of a novel species. Thiorhodococcus mannitoliphagus sp. nov. is the proposed name, with strain WS(T) (=ATCC BAA-1228(T)=VKM B-2393(T)) as the type strain.
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  • 70
    Publication Date: 2018-05-29
    Description: The Tiribí Tuff covered much of the Valle Central of Costa Rica, currently the most densely populated area in the country (∼2.4 million inhabitants). Underlying the tuff, there is a related well-sorted pumice deposit, the Tibás Pumice Layer. Based on macroscopic characteristics of the rocks, we distinguish two main facies in the Tiribí Tuff in correlation to the differences in welding, devitrification, grain size, and abundance of pumice and lithic fragments. The Valle Central facies consists of an ignimbritic plateau of non-welded to welded deposits within the Valle Central basin and the Orotina facies is a gray to light-bluish gray, densely to partially welded rock, with yellowish and black pumice fragments cropping out mainly at the Grande de Tárcoles River Gorge and Orotina plain. This high-aspect ratio ignimbrite (1:920 or 1.1×10−3) covered an area of at least 820 km2 with a long runout of 80 km and a minimum volume outflow of 25 km3 (15 km3 DRE). Geochemically, the tuff shows a wide range of compositions from basaltic-andesites to rhyolites, but trachyandesites are predominant. Replicate new 40Ar/39Ar age determinations indicate that widespread exposures of this tuff represent a single ignimbrite that was erupted 322±2 ka. The inferred source is the Barva Caldera, as interpreted from isopach and isopleth maps, contours of the ignimbrite top and geochemical correlation (∼10 km in diameter). The Tiribí Tuff caldera-forming eruption is interpreted as having evolved from a plinian eruption, during which the widespread basal pumice fall was deposited, followed by fountaining pyroclastic flows. In the SW part of the Valle Central, the ignimbrite flowed into a narrow canyon, which might have acted as a pseudo-barrier, reflecting the flow back towards the source and thus thickening the deposits that were filling the Valle Central depression. The variable welding patterns are interpreted to be a result of the lithostatic load and the influence of the content and size of lithic fragments.
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  • 71
    Publication Date: 2017-06-22
    Description: This study uses three acoustic instruments (different in their operating frequencies, 13, 3.5, and 6–10 kHz, and deployment type, hull-mounted, surface-towed and deep-towed) to investigate and characterize the acoustic response of seafloor NE of Oman in a frequency-independent manner. High-resolution control was achieved by having selected areas of our acoustic transects ground-truthed by sampling and/or sea-floor photography. On the regional scale, the greatest degree of change in backscatter amplitude was correlated with major changes of seabed morphology and lithology. However, small-scale roughness had the biggest effect on amplitude on the local scale, i.e. within each area of specific seafloor type. The study also shows that seafloor reflection amplitude changes are far more easily detected by deep-towed instrument than by surface-towed or hull-mounted systems. Whilst there are significant changes in bioturbation types and density along the transects, the suite of instruments deployed was not able to pick up the effect of the bioturbation on acoustic signals.
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  • 72
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    Microbiology Society
    In:  International Journal of Systematic and Evolutionary Microbiology, 59 (7). pp. 1679-1684.
    Publication Date: 2017-05-30
    Description: Two Gram-positive, aerobic actinomycete strains, designated YIM 48771(T) and YIM 48782(T), were isolated from virgin forest soil samples collected in Hunan Province, China. 16S rRNA gene sequence similarities of the two novel isolates ranged from 96.3 to 97.6% with species of the genus Sphaerisporangium with validly published names but, in the tree based on 16S rRNA gene sequences, the isolates formed distinct phyletic lines. The level of 16S rRNA gene sequence similarity between the two novel isolates was 97.1%. DNA-DNA hybridization of strains YIM 48771(T) and YIM 48782(T) with recognized species of the genus Sphaerisporangium revealed that the level of DNA-DNA relatedness was below 70%. The DNA G+C contents of strains YIM 48771(T) and YIM 48782(T) were 67.1 and 71 mol%, respectively. Chemotaxonomic data [major menaquinone, MK-9(H(4)); major polar lipids, diphosphatidylglycerol, phosphatidylinositol mannoside, phosphatidylethanolamine and phosphoglycolipids; major fatty acids, iso-C(16:0) and 10-methyl C(17:0)] supported the affiliation of the two isolates with the genus Sphaerisporangium. The results of DNA-DNA hybridization and physiological and biochemical tests allowed genotypic and phenotypic differentiation of the two isolates from recognized Sphaerisporangium species. Based on morphological, chemotaxonomical and phylogenetic data, strains YIM 48771(T) and YIM 48782(T) are considered to represent two novel species of the genus Sphaerisporangium, for which the names Sphaerisporangium flaviroseum sp. nov. (type strain, YIM 48771(T)=DSM 45170(T)=KCTC 19393(T)) and Sphaerisporangium album sp. nov. (type strain, YIM 48782(T)=DSM 45172(T)=CCTCC AA 208026(T)) are proposed.
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  • 73
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    Microbiology Society
    In:  International Journal of Systematic and Evolutionary Microbiology, 59 (9). pp. 2200-2203.
    Publication Date: 2017-05-30
    Description: A Gram-positive, milk-white coloured, aerobic strain, YIM 48868(T), was isolated from the rhizosphere soil of Maytenus hookeri Loes in Xishuangbanna, China. 16S rRNA gene sequence similarity studies showed that strain YIM 48868(T) was a member of the genus Actinopolymorpha, showing 96.8% sequence similarity to Actinopolymorpha singaporensis IM 7744(T) and 97.0% similarity to Actinopolymorpha rutila YIM 45725(T). Chemotaxonomic data (peptidoglycan type 1, LL-diaminopimelic acid; sugar pattern C, glucose, rhamnose and ribose; polar lipids PI, diphosphatidylglycerol, phosphaticlylglycerol, phosphatidylinositol mannosides and phosphatidylinositol) were characteristic of the genus Actinopolymorpha. A phylogenetic tree based on 16S rRNA gene sequences showed that strain YIM 48868(T) formed a distinct phylogenetic lineage within the genus Actinopolymorpha. Strain YIM 48868(T) could be differentiated from recognized species by means of phenotypic properties and the predominant menaquinones [MK-9(H(6)), MK-9(H(8)), MK-10(H(6)), MK-10(H(8))]. The DNA G+C content was 66.6 mol%. The DNA-DNA relatedness values between strain YIM 48868(T) and the type strains of A. singaporensis and A. rutila were 48.7% and 53.1%, respectively. These data, in combination with phenotypic and chemotaxonomic data, demonstrate that strain YIM 48868(T) represents a novel species in the genus Actinopolymorpha, for which the name Actinopolymorpha alba sp. nov. is proposed. The type strain is YIM 48868(T) (=CCTCC AA 208030(T) =DSM 45243(T)).
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  • 74
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    In:  Climate Dynamics, 33 (4). pp. 535-547.
    Publication Date: 2016-09-13
    Description: Whereas the predominance of El Nio Southern Oscillation (ENSO) mode in the tropical Pacific sea surface temperature (SST) variability is well established, no such consensus seems to have been reached by climate scientists regarding the Indian Ocean. While a number of researchers think that the Indian Ocean SST variability is dominated by an active dipolar-type mode of variability, similar to ENSO, others suggest that the variability is mostly passive and behaves like an autocorrelated noise. For example, it is suggested recently that the Indian Ocean SST variability is consistent with the null hypothesis of a homogeneous diffusion process. However, the existence of the basin-wide warming trend represents a deviation from a homogeneous diffusion process, which needs to be considered. An efficient way of detrending, based on differencing, is introduced and applied to the Hadley Centre ice and SST. The filtered SST anomalies over the basin (23.5N-29.5S, 30.5E-119.5E) are then analysed and found to be inconsistent with the null hypothesis on intraseasonal and interannual timescales. The same differencing method is then applied to the smaller tropical Indian Ocean domain. This smaller domain is also inconsistent with the null hypothesis on intraseasonal and interannual timescales. In particular, it is found that the leading mode of variability yields the Indian Ocean dipole, and departs significantly from the null hypothesis only in the autumn season.
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  • 75
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    Microbiology Society
    In:  International Journal of Systematic and Evolutionary Microbiology, 59 (9). pp. 2333-2338.
    Publication Date: 2017-05-30
    Description: A spherical-shaped, phototrophic, purple sulfur bacterium was isolated in pure culture from anoxic sediment in a marine aquaculture pond near Bheemli (India). Strain JA142T is Gram-negative and non-motile. It has a requirement for NaCl (optimum of 2 % and maximum of 6 % w/v NaCl). Intracellular photosynthetic membranes are of the vesicular type. In vivo absorption spectra indicate the presence of bacteriochlorophyll a and carotenoids of the okenone series as photosynthetic pigments. Phylogenetic analysis on the basis of 16S rRNA gene sequences showed that strain JA142T is related to halophilic purple sulfur bacteria of the genera Thiohalocapsa and Halochromatium, with the highest sequence similarity to Thiohalocapsa halophila DSM 6210T (97.5 %). Morphological and physiological characteristics differentiate strain JA142T from other species of the genera Halochromatium and Thiohalocapsa. Strain JA142T is sufficiently different from Thiohalocapsa halophila based on 16S rRNA gene sequence analysis and morphological and physiological characteristics to allow the proposal of a novel species, Thiohalocapsa marina sp. nov., with the type strain JA142T (=JCM 14780T =DSM 19078T). The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain JA142T is AM491592. A phase-contrast micrograph of cells of strain JA142T, whole-cell and acetone absorption spectra and 16S rRNA gene sequence-based neighbour-joining, maximum-likelihood, minimum-evolution and maximum-parsimony trees are available as supplementary material with the online version of this paper.
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  • 76
    Publication Date: 2018-01-19
    Description: A thermobarometric and petrologic study of basanites erupted from young volcanic cones along the submarine portions of the three El Hierro rift zones (NE-Rift, NW-Rift and S-Ridge) has been performed to reconstruct magma plumbing and storage beneath the island. Mineral-melt thermobarometry applied to naturally quenched glass and clinopyroxene rims yields pressures ranging from 350 to 1070 MPa with about 80% of the calculated pressures being in the range of 600–800 MPa. This corresponds to a depth range of 19–26 km, implying that the main level of final crystal fractionation is within the uppermost mantle. No systematic dependence between sample locality and fractionation pressures could be observed. Olivine and clinopyroxene crystals in the rocks are complexly zoned and have, on an inter-sample as well as on an intra-sample scale, highly variable core and rim compositions. This can best be explained by mixing of multiply saturated (olivine, magnetite, clinopyroxene, ilmenite), moderately evolved magmas with more mafic magmas being either only saturated with olivine + spinel or with olivine + spinel + clinopyroxene. The inter-sample differences indicate derivation from small, isolated magma chambers which have undergone distinct fractionation and mixing histories. This is in contrast to oceanic intraplate volcanoes situated on plumes with high melt supply rates, e.g. Kilauea Volcano (Hawaii), where magma is mainly transported through a central conduit system and stored in a shallow magma chamber prior to injection into the rift zones. The plumbing system beneath El Hierro rather resembles the magma storage systems beneath, e.g. Madeira or La Palma, indicating that small, intermittent magma chambers might be a common feature of oceanic islands fed by plumes with relatively low fluxes, which results in only limited and periodic magma supply.
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  • 77
    Publication Date: 2019-09-23
    Description: The Fontana Lapilli deposit was erupted in the late Pleistocene from a vent, or multiple vents, located near Masaya volcano (Nicaragua) and is the product of one of the largest basaltic Plinian eruptions studied so far. This eruption evolved from an initial sequence of fluctuating fountain-like events and moderately explosive pulses to a sustained Plinian episode depositing fall beds of highly vesicular basaltic-andesite scoria (SiO2 〉 53 wt%). Samples show unimodal grain size distribution and a moderate sorting that are uniform in time. The juvenile component predominates (〉 96 wt%) and consists of vesicular clasts with both sub-angular and fluidal, elongated shapes. We obtain a maximum plume height of 32 km and an associated mass eruption rate of 1.4 × 108 kg s−1 for the Plinian phase. Estimates of erupted volume are strongly sensitive to the technique used for the calculation and to the distribution of field data. Our best estimate for the erupted volume of the majority of the climactic Plinian phase is between 2.9 and 3.8 km3 and was obtained by applying a power-law fitting technique with different integration limits. The estimated eruption duration varies between 4 and 6 h. Marine-core data confirm that the tephra thinning is better fitted by a power-law than by an exponential trend.
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  • 78
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    Springer
    In:  , ed. by Schmincke, H. U. Springer, Berlin, Germany, 324 pp. Corr. 2d. printing ISBN 3-540-43650-2
    Publication Date: 2015-02-24
    Description: Volcanic eruptions are the most dramatic expression of dynamic processes in the interior of planet Earth. The author, an internationally renowned specialist in the field of volcanology, explains in a concise and easy to understand manner the basics and recent advances in the field of volcanology. Based on plate tectonics and illustrated with nearly 400 color figures, the book offers insights into the generation of magmas and the tectonic setting, composition and origin of volcanoes. An overview of volcanic structures is followed by process-oriented chapters which discuss the role of explosive mechanisms and transport of volcanic material in eruption columns and pyroclastic density currents. The final chapters deal with eruption forecast, their influence on climate and benefits of volcanism. Students and scientists from a broad range of fields will find this book an attractive and up-to date source of information on the current understanding of volcanoes, volcanic eruptions and their impacts on, and benefits to, society.
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  • 79
    Publication Date: 2016-09-21
    Description: Harzburgitic xenoliths cut by pyroxenite veins from Avachinsky volcano, Kamchatka, are derived from the sub-arc mantle and record element transfer from the slab to the arc. Olivine and orthopyroxene in the harzburgites have Li isotopic compositions (δ7Li = +2.8 to +5.6) comparable to estimates of the upper mantle (δ7Li ~ +4 ± 2). The pyroxenite veins, which represent modal metasomatism and may therefore provide information about the metasomatic agent, have mantle-normalized trace element characteristics that suggest overprinting of their mantle source by an aqueous, slab-derived fluid. These include relative enrichments of Pb over Ce, U over Th and Sr over Nd. Li is enriched relative to the HREE, and ortho- and clinopyroxene from the veins are in Li elemental and isotopic equilibrium with each other and the surrounding harzburgite. Vein samples (δ7Li = +3.0 to +5.0) do not record a significant slab-derived δ7Li signature. These observations can be reconciled if slab Li diffusively re-equilibrates in the mantle wedge. Modeling demonstrates that Li equilibration of small (1–2 cm width) veins or melt conduits is achieved at mantle wedge temperatures within 101–105 years. We conclude that strongly fractionated Li isotopic signatures cannot be sustained for long periods in the sub-arc mantle, at least at shallow (〈70 km) depths.
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  • 80
    Publication Date: 2018-07-02
    Description: The Mediterranean Sea is located in a crossroad of mid-latitude and subtropical climatic modes that enhance contrasting environmental conditions over both latitudinal and longitudinal ranges. Here, we show that the large-scale environmental forcing is reflected in the basin scale trends of the adult population of the calanoid copepod Centropages typicus. The species is distributed over the whole Mediterranean basin, and maximal abundances were found in the north-western basin associated to oceanic fronts, and in the Adriatic Sea associated to shallow and semi enclosed waters. The peak of main abundances of C. typicus correlates with the latitudinal temperature gradient and the highest seasonal abundances occurred in spring within the 14-18A degrees C temperature window. Such thermal cline may define the latitudinal geographic region where C. typicus seasonally dominates the > 200 mu m-sized spring copepod community in the Mediterranean Sea. The approach used here is generally applicable to investigate the large-scale spatial patterns of other planktonic organisms and to identify favourable environmental windows for population development.
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  • 81
    Publication Date: 2019-09-23
    Description: New geochemical data from the Cocos Plate constrain the composition of the input into the Central American subduction zone and demonstrate the extent of influence of the Galapagos Hotspot on the Cocos Plate. Samples include sediments and basalts from Ocean Drilling Program (ODP) Site 1256 outboard of Nicaragua, gabbroic sills from ODP Sites 1039 and 1040, tholeiitic glasses from the Fisher Ridge off northwest Costa Rica, and basalts from the Galapagos Hotspot Track outboard of Central Costa Rica. Site 1256 basalts range from normal to enriched MORB in incompatible elements and have Pb and Nd isotopic compositions within the East Pacific Rise MORB field. The sediments have similar Pb-206/Pb-204 and only slightly more radiogenic Pb-207/Pb-204 and Pb-208/Pb-204 isotope ratios than the basalts. Altered samples from the subducting Galapagos Hotspot Track have similar Nd and Pb isotopic compositions to fresh Galapagos samples but have significantly higher Sr isotopic composition, indicating that the subduction input will have a distinct geochemical signature from Galapagos-type mantle material that may be present in the wedge beneath Costa Rica. Gabbroic sills from Sites 1039 and 1040 in East Pacific Rise (EPR) crust show evidence for influence of the Galapagos Hotspot similar to 100 km beyond the morphological hotspot track
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  • 82
    Publication Date: 2017-05-24
    Description: A yellow-pigmented, Gram-negative, slowly gliding, rod-shaped, strictly aerobic bacterium (UST040801-001T) was isolated from marine sediment. The DNA G+C content was 39?9 mol%. The predominant fatty acids were a15 : 0, i15 : 0, i15 : 0 3-OH, i17 : 1v9c, i17 : 0 3-OH and summed feature 3, comprising i15 : 0 2-OH and/or 16 : 1v7c (altogether representing 76?2% of the total). MK-6 was the only respiratory quinone. Flexirubin-type pigments were not produced. Phylogenetic analysis based on 16S rRNA gene sequences indicated that Gramella echinicola KMM 6050T (the only species in the genus) was the closest relative of UST040801-001T, sharing 98?0% sequence similarity. The DNA–DNA relatedness between UST040801-001T and Gramella echinicola KMM 6050T was 13 %. Strain UST040801-001T can be distinguished from G. echinicola by means of 11 phenotypic traits. The results of molecular and phenotypic analyses suggested that UST040801-001T represents a novel species of Gramella. The name Gramella portivictoriae sp. nov. is proposed for this bacterium, with UST040801-001T (=NRRL 41137T=JCM 13192T) as the type strain.
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  • 83
    Publication Date: 2018-01-19
    Description: In the cold-temperate setting of the Swedish Kosterfjord area, experimental carbonate and PVC substrates were deployed for a 6, 12 and 24-month duration along a transect from euphotic to aphotic depths in order to study bioerosion and carbonate accretion patterns. Among the organisms that contribute to the latter by secreting calcareous skeletons, epibenthic foraminiferans represent a major component, both in terms of diversity (a dozen species) as well as in the number of individuals (exceeding 50,000 individuals per m2 at certain depths). The by far dominating species were found to be Cibicides lobatulus and the agglutinating Lituotuba lituiformis, along with smaller numbers of Planorbulina mediterranensis, Tholosina vesicularis and Nubecularia lucifuga. The foraminiferal distribution exhibits a pronounced abundance maximum in shallow waters at 7 and especially 15 m and a maximum in diversity at 15-50 m water depth. Some of the foraminiferans encountered, such as Cibicides lobatulus and the rare Gypsina vesicularis, were found to contribute also to the bioerosion of the calcareous substrates by etching shallow attachment scars. These prominent traces witness the former presence of benthic foraminiferans on fossil to Recent hardgrounds, inferring a potential applicability as an in situ proxy where tests are not preserved. Estimated minimum carbonate production rates for the dominant Cibicides lobatulus reach a maximum of 0.326 g/m2/year with the highest rates occurring at 7 to 30 m water depth. Carbonate production rates are up to two magnitudes higher on the PVC (0-0.326 g/m2/year) than on the carbonate substrates (0-0.010 g/m2/year) and are considerably higher than estimates previously reported from the western Baltic.
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  • 84
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    Microbiology Society
    In:  International Journal of Systematic and Evolutionary Microbiology, 59 . pp. 350-356.
    Publication Date: 2019-09-23
    Description: A novel alphaproteobacterium, strain LD81(T), was isolated from the marine macroalga. Laminaria saccharina. The bacterium is mesophilic and shows a typical marine growth response. It is a chemoheterotrophic aerobe with the potential for denitrification. Growth optima are 25 degrees C, pH 5.5 and 3% NaCl. Strain LD81(T) has a unique phylogenetic position, not fitting any of the known families of the Alphaproteobacteria. The 16S rRNA gene sequence revealed a distant relationship to species of several orders of the Alphaproteobacteria, with less than 90% sequence similarity. Phylogenetically, strain LD81(T) is related to the type strains of Terasakiella pusilla (88.4% 16S rRNA gene sequence similarity) and the three Thalassospira species (88.9-89.2%. It forms a cluster with these bacteria and a novel as-yet undescribed isolate (KOPRI 13522; 96.6% sequence similarity). Strain LD81(T) has a relatively low DNA G + C content (51.1 mol%) and, due to its distant phylogenetic position from all other alphaprotecibacteria, strain LD81(T) (=NCIMB 14374(T) =JCM 14845(T)) is considered as the type strain of a novel species within a new genus, for which the name Kiloniella laminariae gen. nov., sp. nov. is proposed. The genus Kiloniella represents the type of the new family Kiloniellaceae fam. nov. and order Kiloniellales ord. nov.
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  • 85
    Publication Date: 2018-01-19
    Description: Melt and fluid inclusions have been studied in olivine phenocrysts (Fo 81–79) from trachybasalts of the Southern Baikal volcanic area, Dzhida field. The melt inclusions were homogenized, quenched, and analyzed on an electron and ion microprobe. The study of homogenized glasses of nine inclusions showed that basaltic melts (SiO2 = 47.1–50.3 wt %, MgO = 5.0–7.7 wt %, CaO = 7.1–11.1 wt %) have high contents of Al2O3 (17.1–19.6 wt %), Na2O (4.1–6.2 wt %), K2O (2.2–3.3 wt %), and P2O5 (0.6–1.1 wt %). The volatile contents are low (in wt %): 0.24–0.31 H2O, 0.08 F, 0.03 Cl, and 0.02 S. Primary fluid inclusions in olivines from four trachybasalt samples contain high-density CO2 (0.73–0.87 g/cm3), indicating a CO2 fluid pressure of 4.3–6.6 kbar at 1200–1300°C and olivine crystallization depths of 16–24 km. Ion microprobe analyses of 20 glasses from melt inclusions for trace elements showed that the magmas of the Baikal rift were enriched in incompatible elements, thus differing from oceanic rift basalts and resembling oceanic island basalts. A comparison of our data on melt and fluid inclusions in olivine from trachybasalts of the Dzhida field with preexisting data on the Eastern Tuva volcanic highland in the Southern Baikal volcanic area showed that they had similar contents of volatiles, major, and trace elements.
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  • 86
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    Springer
    In:  In: Marine geochemistry. , ed. by Schulz, H. D. and Zabel, M. Springer, Berlin, pp. 457-480. 2. ed.
    Publication Date: 2014-02-12
    Type: Book chapter , NonPeerReviewed
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  • 87
    Publication Date: 2014-02-18
    Description: The Laptev Sea still ranks among the less known regions of the world’s ocean. Here, we describe the distribution and composition of macrobenthic communities of the eastern shelf and identify key environmental control factors. Samples were collected from dredge catches carried out at 11 stations at depths between 17 and 44 m in August/September 1993 during the TRANSDRIFT I cruise of the Russian R/V “Ivan Kireev.” A total of 265 species were identified from the samples, mostly crustaceans (94). Species numbers per station ranged from 30 to 104. Macrobenthic community distribution clearly showed a depth zonation, consisting of a “Shallow” zone (〈20 m), dominated by the crustaceans Mysis oculata (Mysidacea) and Saduria entomon (Isopoda) as well as molluscs, an “Intermediate” zone (20–30 m), characterised by a clear dominance of the bivalve Portlandia arctica, and a “Deep” zone (〉30 m) with bivalves P. arctica and Nuculoma bellotii as well as brittle stars Ophiocten sericeum and Ophiura sarsi being most abundant. According to a correlation analysis between faunal and environmental data a combination of duration of ice cover and water depth, respectively, showed the highest affinity to macrobenthic distribution. We conclude that the food input to the benthos, which is largely related to ice-cover regime, and the stress due to the pronounced seasonal salinity variability, which is primarily related to water depth, are prime determinants of macrobenthic community distribution and major causes of the prominent depth zonation in the Laptev Sea. Within the depth zones, sediment composition seems to be most significant in controlling the patterns in the distribution of the benthic fauna.
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  • 88
    Publication Date: 2017-10-24
    Description: Copper, Cd and Zn can be found at elevated concentrations in contaminated estuarine and coastal waters and have potential toxic effects on phytoplankton species. In this study, the effects of these metals on the intracellular production of the polypeptides phytochelatin and glutathione by the marine diatom Phaeodactylum tricornutum were examined in laboratory cultures. Single additions of Cu and Cd (0.4 μM Cu2 and 0.45 μM Cd2+) to the culture medium induced the production of short-chained phytochelatins ((γ-Glu-Cys) n -Gly where n = 2-5), whereas a single addition of Zn (2.2 μM Zn2+) did not stimulate phytochelatin production. Combination of Zn with Cu resulted in a similar phytochelatin production compared with a single Cu addition. The simultaneous exposure to Zn and Cd led to an antagonistic effect on phytochelatin production, which was probably caused by metal competition for cellular binding sites. Glutathione concentrations were affected only upon exposure to Cd (85 increase) or the combination of Cd with Zn (65 decrease), relative to the control experiment. Ratios of phytochelatins to glutathione indicated a pronounced metal stress in response to exposures to Cu or Cd combined with Zn. This study indicates that variabilities in phytochelatin and glutathione production in the field can be explained in part by metal competition for cellular binding sites. © Springer 2006.
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  • 89
    Publication Date: 2014-09-05
    Description: The Gakkel Ridge in the Arctic Ocean with its adjacent Nansen and Amundsen Basins is a key region for the study of mantle melting and crustal generation at ultraslow spreading rates. We use free-air gravity anomalies in combination with seismic reflection and wide-angle data to compute 2-D crustal models for the Nansen and Amundsen Basins in the Arctic Ocean. Despite the permanent pack-ice cover two geophysical transects cross both entire basins. This means that the complete basin geometry of the world’s slowest spreading system can be analysed in detail for the first time. Applying standard densities for the sediments and oceanic crystalline crust, the gravity models reveal an unexpected heterogeneous mantle with densities of 3.30 × 103, 3.20 × 103 and 3.10 × 103 kg/m3 near the Gakkel Ridge. We interpret that the upper mantle heterogeneity mainly results from serpentinisation and thermal effects. The thickness of the oceanic crust is highly variable throughout both transects. Crustal thickness of less than 1 km dominates in the oldest parts of both basins, increasing to a maximum value of 6 km near the Gakkel Ridge. Along-axis heat flow is highly variable and heat flow amplitudes resemble those observed at fast or intermediate spreading ridges. Unexpectedly, high heat flow along the Amundsen transect exceeds predicted values from global cooling curves by more than 100%.
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  • 90
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    Springer
    In:  Physical Oceanography, 16 (3). pp. 177-187.
    Publication Date: 2019-06-06
    Description: The monthly average values of the anomalies of the ocean level (according to the satellite data for 1992–2002) and the annual average dynamic heights (hydrological data) are used to compute the seasonal cycle of geostrophic currents on the surface of the Atlantic Ocean. It is shown that the west and east currents are intensified with a phase difference of several months. At the same time, their latitudinal displacements are quasisynchronous. A delay of the seasonal signal in the east-west direction of about 2–3 months (on the average) is typical of currents in the tropical zone of the Northern Hemisphere. On the contrary, in the South Atlantic, the seasonal signal propagates in the west-east direction and its phase delay can be as large as almost six months.
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  • 91
    Publication Date: 2018-01-19
    Description: Newly isolated strains Bacillus sp. FME 1 and FME 2 were evaluated for the cellulolytic enzymes production during submerged fermentation (SmF) of different substrates including rice husk, Whatman filter paper and cellulose powder CF 11. Extracellular enzyme assays for CMCase, FPase and β-glucosidase were examined up to 8 days of submerged fermentation. Among the three substrates, rice husk was the most suitable substrate for higher production of cellulolytic enzymes. Maximum titers of 100, 45, and 3.5 U/mL in respect of CMCase, FPase and β-glucosidase in Bacillus sp. FME 2 were recovered as against 45, 12, and 0.39 U/mL in Bacillus sp. FME 1 respectively, at their respective peak time intervals. Bacillus sp. FME 2 was found to produce higher cellulolytic enzyme activities than Bacillus sp. FME 1.
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  • 92
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    Springer
    In:  Phytochemistry Reviews, 5 (1). pp. 99-108.
    Publication Date: 2018-01-25
    Description: Malaria, one of the most problematic infectious diseases worldwide, is on the rise. The absence of an effective vaccine and the spread of drug-resistant strains of Plasmodium clearly indicate the necessity for the development of new chemotherapeutic agents and the identification of novel targets. The recent discovery of a relict, non-photosynthetic plastid-like organelle, the so-called apicoplast, in Plasmodium has opened up new avenues in malaria research. It also initiated the Plasmodium falciparum genome sequencing project, which revealed a number of biochemical pathways previously unknown to Plasmodium, i.e. cytosolic shikimate pathway, apicoplastic type II fatty acid, non-mevalonate isoprene and haem biosyntheses. Since these vital biosynthetic processes are absent in humans or fundamentally different from those found in humans, they represent excellent targets for pharmaceutical interventions. We are interested in the type II fatty acid synthase (FAS II) system of malaria parasite and focus on the FabI enzyme, the only known enoyl-ACP reductase in Plasmodium involved in the final reduction step of the fatty acid chain elongation cycle. Here we describe the general aspects of fatty acid biosynthesis, its essentiality to the malaria parasite and our continuing efforts to discover in Turkish medicinal plants natural antimalarial agents, which specifically target the plasmodial FabI enzyme.
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  • 93
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    Springer
    In:  Water, Air, and Soil Pollution, 170 (1-4). pp. 143-160.
    Publication Date: 2021-03-30
    Description: Sulfate (SO4 2−), nitrate (NO3 −) and ammonium (NH4 +) concentrations in precipitation as measured at NADP sites within the Ohio River Valley of the Midwestern USA between 1985 and 2002 are quantified and temporal trends attributed to changes/ variations in (i) the precipitation regime, (ii) emission patterns and (iii) air mass trajectories. The results indicate that mean SO4 2− concentrations in precipitation declined by 37–43% between 1985 and 2002, while NO3 − concentrations decreased by 1–32%, and NH4 + concentrations exhibited declining concentrations at some sites and increasing concentrations at others. The change in SO4 2− concentrations is in broad agreement with estimated reductions in sulfur dioxide emissions. Changes in NO3 − concentrations appear to be less closely related to variations in emissions of oxides of nitrogen and exhibit a stronger dependence on weekly precipitation volume. Up to one quarter of the variability in log-transformed weekly NO3 − concentrations in precipitation is explicable by variations in precipitation volume. Trends in annual average log-transformed SO4 2− concentrations exhibit only a relatively small influence of variability in weekly precipitation amount but at each of the sites considered the variance explanation of annual average log-transformed SO4 2− by sampling year was increased by removing the influence of precipitation volume. Annual mean log-transformed ion concentrations detrended for precipitation volume (by week) and emission changes (by year) exhibit positive correlations at all sites, indicating that the residual variability of SO4 2−, NO3 − and NH4 + may have a common source which is postulated to be linked to synoptic scale variability and air mass trajectories.
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  • 94
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    Springer
    In:  Springer, Berlin, Germany, 175 pp.
    Publication Date: 2021-06-18
    Type: Book , NonPeerReviewed
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  • 95
    Publication Date: 2021-08-10
    Description: To determine whether stable isotope measurements of body feathers can be used to investigate the isotopic niche of moulting (inter-nesting) adult seabirds, we examined the stable carbon (δ13C) and nitrogen (δ15N) isotopic composition of body feathers of breeding wandering albatrosses (Diomedea exulans) from Crozet Islands, southern Indian Ocean. First we showed that the isotopic composition of body feathers was not significantly different from that of wing feathers, being thus a safe alternative to flight feathers whose collection impairs the birds’ flying ability. Second, we looked at the variances in δ13C and δ15N values resulting from the isotopic measurement of a single feather, four different feathers, and a pool of four feathers per bird, to delineate the best isotopic analytical procedure. A two-step protocol is proposed that allows investigating both the intra- and inter-individual components of the niche width of the species. In a first step, isotopic measurements on a single feather per bird are used to define isotopic specialist from isotopic generalist populations. In a second step and for generalist populations only, measurements on additional (three) feathers per bird are used to delineate type A from type B isotopic generalists (Bearhop et al. in J Anim Ecol 73:1007–1012, 2004). Third, from a biological point of view, our data showed different moulting isotopic niches for adult males and females, and also within female wandering albatrosses. Since the isotopic composition of body feathers in this species reflects that of wing feathers, our results suggest that, after validation, body feathers have the potential for investigating the foraging ecology of other Procellariiforms and seabirds during the poorly known inter-nesting period.
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  • 96
    Publication Date: 2021-09-03
    Description: Earlier work found cuttlefish (Sepia officinalis) ventilatory muscle tissue to progressively switch to an anaerobic mode of energy production at critical temperatures (T c) of 7.0 and 26.8°C. These findings suggested that oxygen availability limits thermal tolerance. The present study was designed to elucidate whether it is the ventilatory apparatus that sets critical temperature thresholds during acute thermal stress. Routine metabolic rate (rmr) rose exponentially between 11 and 23°C, while below (8°C) and above (26°C) this temperature range, rmr was significantly depressed. Ventilation frequency (f V) and mean mantle cavity pressure (MMP) followed an exponential relationship within the entire investigated temperature range (8–26°C). Oxygen extraction from the ventilatory current (EO2) decreased in a sigmoidal fashion with temperature, falling from 〉 90% at 8°C to 32% at 26°C. Consequently, ventilatory minute volume (MVV) increased by a factor of 20 from 7 to 150% body weight min−1 in the same temperature interval. Increases in MMP and MVV resulted in ventilatory muscle power output (P out) increasing by a factor of 〉 80 from 0.03 to 2.4 mW kg−1 animal. Nonetheless, costs for ventilatory mechanics remain below 1.5% rmr in the natural thermal window of the population (English Channel, 9–17°C), owing to very low MMPs of 〈 0.05 kPa driving the ventilatory stream, and may maximally rise to 8.6% rmr at 26°C. Model calculations suggest that the ventilatory system can maintain high arterial PO2 values of 〉 14 kPa over the entire temperature interval. We therefore conclude that the cuttlefish ventilation system is probably not limiting oxygen transfer during acute thermal stress. Depression of rmr, well before critical temperatures are being reached, is likely caused by circulatory capacity limitations and not by fatigue of ventilatory muscle fibres.
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  • 97
    Publication Date: 2021-09-06
    Description: A new species of squid, Kondakovia nigmatullini, is described based on two specimens from sub-Antarctic waters of the Southwest Atlantic. The new species is characterised by short, broad, rhombic fins, long rostrum of the gladius (~13% ML); very weak development or absence of longitudinal ridges on the mantle surface; some reticulate folds on mantle surface; 23–27 club hooks; subequal funnel/mantle components of the locking apparatus, and a tricuspid rachidian, with small lateral cusps.
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  • 98
    Publication Date: 2021-07-29
    Description: By electron microscopic and immunobiochemical analyses we have confirmed earlier evidence that Nautilus pompilius hemocyanin (NpH) is a ring-like decamer (M(r) = approximately 3.5 million), assembled from 10 identical copies of an approximately 350-kDa polypeptide. This subunit in turn is substructured into seven sequential covalently linked functional units of approximately 50 kDa each (FUs a-g). We have cloned and sequenced the cDNA encoding the complete polypeptide; it comprises 9198 bp and is subdivided into a 5' UTR of 58 bp, a 3' UTR of 365 bp, and an open reading frame for a signal peptide of 21 amino acids plus a polypeptide of 2903 amino acids (M(r) = 335,881). According to sequence alignments, the seven FUs of Nautilus hemocyanin directly correspond to the seven FU types of the previously sequenced hemocyanin "OdH" from the cephalopod Octopus dofleini. Thirteen potential N-glycosylation sites are distributed among the seven Nautilus hemocyanin FUs; the structural consequences of putatively attached glycans are discussed on the basis of the published X-ray structure for an Octopus dofleini and a Rapana thomasiana FU. Moreover, the complete gene structure of Nautilus hemocyanin was analyzed; it resembles that of Octopus hemocyanin with respect to linker introns but shows two internal introns that differ in position from the three internal introns of the Octopus hemocyanin gene. Multiple sequence alignments allowed calculation of a rather robust phylogenetic tree and a statistically firm molecular clock. This reveals that the last common ancestor of Nautilus and Octopus lived 415 +/- 24 million years ago, in close agreement with fossil records from the early Devonian.
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  • 99
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    Springer
    In:  Surveys in Geophysics, 30 (6). pp. 617-618.
    Publication Date: 2018-10-17
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  • 100
    Publication Date: 2020-06-26
    Description: In order to assess the fidelity of coral Sr/Ca for quantitative reconstructions of sea surface temperature variations, we have generated three monthly Sr/Ca time series from Porites corals from the lagoon of Peros Banhos (71°E, 5°S, Chagos Archipelago). We find that all three coral Sr/Ca time series are well correlated with instrumental records of sea surface temperature (SST) and air temperature. However, the intrinsic variance of the single-core Sr/Ca time series differs from core to core, limiting their use for quantitative estimates of past temperature variations. Averaging the single-core data improves the correlation with instrumental temperature (r 〉 0.7) and allows accurate estimates of interannual temperature variations (~0.35°C or better). All Sr/Ca time series indicate a shift towards warmer temperatures in the mid-1970s, which coincides with the most recent regime shift in the Pacific Ocean. However, the magnitude of the warming inferred from coral Sr/Ca differs from core to core and ranges from 0.26 to 0.75°C. The composite Sr/Ca record from Peros Banhos clearly captures the major climatic signals in the Indo-Pacific Ocean, i.e. the El Niño–southern oscillation and the Pacific decadal oscillation. Moreover, composite Sr/Ca is highly correlated with tropical mean temperatures (r = 0.7), suggesting that coral Sr/Ca time series from the tropical Indian Ocean will contribute to multi-proxy reconstructions of tropical mean temperatures.
    Type: Article , PeerReviewed
    Format: text
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