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  • Wiley-Blackwell  (47,618)
  • 2005-2009  (46)
  • 1995-1999  (47,572)
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  • 1
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    The dermal tubercles of Cranchia scabra (Mollusca, Cephalopoda); surface structure and development (2009)
    Wiley-Blackwell
    In:  Journal of Zoology, 179 (3). pp. 291-295.
    Details
    Publication Date: 2020-07-17
    Description: The cartilaginous tubercles of the mantle of the squid Cranchia scabra have been examined with the scanning electron microscope. Some tubercles are small, simple nodules whereas others are large with a complex Maltese cross form. The varying shapes and sizes probably represent a developmental sequence. The possible role of the tubercles is discussed.
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  • 2
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    The role of the Iceland Ice Sheet in the North Atlantic during the late Quaternary: a review and evidence from Denmark Strait (2008)
    Wiley-Blackwell
    In:  Journal of Quaternary Science, 23 (1). pp. 3-20.
    Details
    Publication Date: 2017-04-06
    Description: Investigations indicate that the Iceland Ice Sheet was reduced in size during MIS 3 but readvanced to the shelf break at the LGM. Retreat occurred very rapidly around 15 k–16 k cal. yr BP. By contrast, the margin of the ice sheet on the East Greenland shelf, north of the Denmark Strait, was at or close to the shelf break during MIS 3 and 2 and retreat starting ∼17 k cal. yr BP. Quantitative X-ray diffraction analysis of the 〈2 mm sediment fraction was undertaken on 161 samples from Iceland and East Greenland diamictons, and from cores on the slopes and margins of the Denmark Strait. Weight% mineralogical data are used in a principal component analysis to differentiate sediments derived from the two margins. The first two PC axes explain 52% of the variance. These associations are used to characterise sediments as being affiliated with (a) Iceland, (b) East Greenland or (c) mixed. The contribution from Iceland becomes prominent during MIS 2. The extensive outcrop of early Tertiary basalts on East Greenland between 68° and 71° N is an alternative source for basaltic clasts and North Atlantic sediments with εNd(0) values close to ±0.
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  • 3
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    The Holocene tephrostratigraphic record of Lake Shkodra (Albania and Montenegro) (2009)
    Wiley-Blackwell
    In:  Journal of Quaternary Science, 25 (5). pp. 633-650.
    Details
    Publication Date: 2017-12-19
    Description: Two cores were recovered in the southeastern part of Lake Shkodra (Montenegro and Albania) and sampled for identification of tephra layers. The first core (SK13, 7.8 m long) was recovered from a water depth of 7 m, while the second core (SK19, 5.8 m long) was recovered close to the present-day shoreline (water depth of 2 m). Magnetic susceptibility investigations show generally low values with some peaks that in some cases are related to tephra layers. Naked-eye inspection of the cores allowed the identification of four tephra layers in core SK13 and five tephra layers in core SK19. Major element analyses on glass shards and mineral phases allowed correlation of the tephra layers between the two cores, and their attribution to six different Holocene explosive eruptions of southern Italy volcanoes. Two tephra layers have under-saturated composition of glass shards (foiditic and phonolitic) and were correlated to the AD 472 and the Avellino (ca. 3.9 cal. ka BP) eruptions of Somma-Vesuvius. One tephra layer has benmoreitic composition and was correlated to the FL eruption of Mount Etna (ca. 3.4 cal. ka BP). The other three tephra layers have trachytic composition and were correlated to Astroni (ca. 4.2 cal. ka BP), Agnano Monte Spina (ca. 4.5 cal. ka BP) and Agnano Pomici Principali (ca. 12.3 cal. ka BP) eruptions of Campi Flegrei. The ages of tephra layers are in broad agreement with eight 14C accelerator mass spectrometric measurements carried out on plant remains and charcoal from the lake sediments at different depths along the two cores. The recognition of distal tephra layers from Italian volcanoes allowed the physical link of the Holocene archive of Lake Shkodra to other archives located in the central Mediterranean area and the Balkans (i.e. Lake Ohrid). Five of the recognised tephra layers were recognised for the first time in the Balkans area, and this has relevance for volcanic hazard assessment and for ash dispersal forecasting in case of renewed explosive activity from some of the southern Italy volcanoes. Copyright © 2009 John Wiley & Sons, Ltd.
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  • 4
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    A thousand-year record of temperature variations for Germany and Central Europe based on documentary data (2009)
    Wiley-Blackwell
    In:  Journal of Quaternary Science, 24 (5). pp. 437-449.
    Details
    Publication Date: 2018-05-15
    Description: This paper presents a temperature reconstruction of the past 1000 years for Central Europe, based on chronological records. The advantages and limitations of this hermeneutic, text-based approach are discussed and the statistic methodology is introduced. Historical documents represent direct observation of weather and atmospheric conditions with highest temporal resolution available and precise dating. A major advantage of these extensive data is that they allow the reconstruction of large numbers of variables such as winter temperature, precipitation, pressure patterns or climate extremes as well as floods or storms. Within this hermeneutic climatological research approach, even human impacts and social dimensions of climate development can be examined. In order to quantify the historical information, statistical methods are applied, based on an index approach.
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  • 5
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    Beak and radula growth in Octopus vulgaris (2009)
    Wiley-Blackwell
    In:  Journal of Zoology, 170 (4). pp. 451-462.
    Details
    Publication Date: 2020-07-17
    Description: The dry weight and the crest length of the upper and lower beak, the length of the radula ribbon, the average width of the base of the six proximal and distal rachidian teeth as well as the total number of these teeth have all been related to the live body weight of octopuses between 1.1 and 4440 g. From any one of these parameters it is possible to estimate the size and approximate age of the animal.
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  • 6
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    Mastigoteuthis-the whip-lash squid (2009)
    Wiley-Blackwell
    In:  Journal of Zoology, 181 (4). pp. 527-559.
    Details
    Publication Date: 2020-07-17
    Description: Features of the brain of this oceanic squid have been investigated and related, as far as possible, to its habits and mode of life. The body and arms are much vacuolated for buoyancy and the animal probably lives with the head upwards. The very long whip-like tentacles are not vacuolated and perhaps hang downwards. They are covered by numerous minute pedunculated suckers, perhaps providing a sticky surface. A special nerve running outside the brain carries signals from the arms and tentacles to the magnocellular lobe, which is very large and of complex structure. However, there are no giant cells and the mantle is weak. Propulsion is mainly by the large fins, which are controlled from the magnocellular lobe, presumably using the information from the arms and tentacles.
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  • 7
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    Meiobenthos from an active methane seepage area in the NW Black Sea (2007)
    Wiley-Blackwell
    In:  Marine Ecology, 28 (1). pp. 152-159.
    Details
    Publication Date: 2020-07-14
    Description: Meiobenthos densities and higher taxon composition were studied in an active gas seepage area at depths from 182 to 252 m in the submarine Dnieper Canyon located in the northwestern part of the Black Sea. The meiobenthos was represented by Ciliata, Foraminifera, Nematoda, Polychaeta, Bivalvia, Gastropoda, Amphipoda, and Acarina. Also present in the sediment samples were juvenile stages of Copepoda and Cladocera which may be of planktonic origin. Nematoda and Foraminifera were the dominant groups. The abundance of the meiobenthos varied between 2397 and 52,593 ind.·m−2. Maximum densities of Nematoda and Foraminifera were recorded in the upper sediment layer of a permanent H2S zone at depths from 220 to 250 m. This dense concentration of meiobenthos was found in an area where intense methane seeps were covered by methane-oxidizing microbial mats. Results suggest that methane and its microbial oxidation products are the factors responsible for the presence of a highly sulfidic and biologically productive zone characterized by specially adapted benthic groups. At the same time, an inverse correlation was found between meiofauna densities and methane concentrations in the uppermost sediment layers. The hypothesis is that the concentration of Nematoda and Foraminifera within the areas enriched with methane is an ecological compromise between the food requirements of these organisms and their adaptations to the toxic H2S.
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  • 8
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    The time and frequency of responses by Octopus vulgaris to an automatic food dispenser (2009)
    Wiley-Blackwell
    In:  Journal of Zoology, 158 (4). pp. 475-483.
    Details
    Publication Date: 2020-07-17
    Description: An automatic food dispenser was designed for use with Octopus vulgaris Lamarck. One live crab was delivered each time the octopus pulled a white shape attached to the dispenser. The apparatus provided a continuous record of the time and frequency of feeding over periods of up to 15 days.
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  • 9
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    Climatic oscillations in central Italy during the Last Glacial–Holocene transition: the record from Lake Accesa (2006)
    Wiley-Blackwell
    In:  Journal of Quaternary Science, 21 (4). pp. 311-320.
    Details
    Publication Date: 2017-12-19
    Description: This paper presents an event stratigraphy based on data documenting the history of vegetation cover, lake-level changes and fire frequency, as well as volcanic eruptions, over the Last Glacial–early Holocene transition from a terrestrial sediment sequence recovered at Lake Accesa in Tuscany (north-central Italy). On the basis of an age–depth model inferred from 13 radiocarbon dates and six tephra horizons, the Oldest Dryas–Bølling warming event was dated to ca. 14 560 cal. yr BP and the Younger Dryas event to ca. 12 700–11 650 cal. yr BP. Four sub-millennial scale cooling phases were recognised from pollen data at ca. 14 300–14 200, 13 900–13 700, 13 400–13 100 and 11 350–11 150 cal. yr BP. The last three may be Mediterranean equivalents to the Older Dryas (GI-1d), Intra-Allerød (GI-1b) and Preboreal Oscillation (PBO) cooling events defined from the GRIP ice-core and indicate strong climatic linkages between the North Atlantic and Mediterranean areas during the last Termination. The first may correspond to Intra-Bølling cold oscillations registered by various palaeoclimatic records in the North Atlantic region. The lake-level record shows that the sub-millennial scale climatic oscillations which punctuated the last deglaciation were associated in central Italy with different successive patterns of hydrological changes from the Bølling warming to the 8.2 ka cold reversal. Copyright © 2006 John Wiley & Sons, Ltd.
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  • 10
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    The mandibular movements of Octopus vulgaris (2009)
    Wiley-Blackwell
    In:  Journal of Zoology, 188 (1). pp. 53-67.
    Details
    Publication Date: 2020-07-17
    Description: The movements of the isolated buccal mass of Octopus vulgaris have been investigated. The beaks undergo rhythmic cycles of activity in the absence of applied stimulation and after electrical stimulation of the inter-buccal connective. Initial opening, closing, retraction and re-opening phases of movement are described. This cycle of movements is taken to resemble those in the intact animal. Anatomical and electrical evidence identifies the superior mandibular muscle as being partly responsible for the closing and retraction phases of movement. The inferior buccal ganglion determines the sequence of these buccal movements, but modification by sensory feed-back from the musculature is also implied. The preparation will allow a closer comparison of the control of movement in cephalopods and gastropods.
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  • 11
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    Growth and development of Taonius megalops (Mollusca: Cephalopoda), and some phases of its life cycle (2009)
    Wiley-Blackwell
    In:  Journal of Zoology, 179 (1). pp. 19-83.
    Details
    Publication Date: 2020-07-17
    Description: Taonius megalops is a neutrally buoyant oceanic squid, very different in form when young and old. The young, has a round, sac-like mantle and relatively long tentacles, while the adult has an elongated cone-like mantle and relatively short tentacles. The transition in shape and form is gradual and has been followed in animals of between 3 and 180 mm dorsal mantle length. Statistical tests on various parameters investigated, both external and internal, revealed good correlation with the dorsal mantle length and confirmed the descriptions of the development of the chromatophores and subocular light organs with growth. It was concluded that these animals, captured in the Atlantic Ocean, all belonged to the species T. megalops Prosch 1849. This study has permitted us to suggest a tentative outline of the life cycle, although no adults were present in the material available.
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  • 12
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    Is there external digestion by Octopus? (2009)
    Wiley-Blackwell
    In:  Journal of Zoology, 202 (3). pp. 441-447.
    Details
    Publication Date: 2020-07-17
    Description: A crab which has been captured and paralysed by an octopus but retrieved 1 1/2 min later cannot at first be pulled apart by the experimenter: 27 min later it can be dismembered easily. This demonstrates that there is external digestion when Octopus vulgaris feeds upon crabs. However, it is strictly limited at this stage to the arthrodial membrane and the musculo-skeletal attachment mechanisms as the exoskeleton separates at the joints allowing the muscles to be drawn out of the appendages. And yet, two hours after capture, pieces of crab meat are still recognizable in the octopus's stomach. The process of paralysing and cleaning a crab was noticeably slowed after the surgical removal of the radula, salivary papilla or the lateral buccal palps.
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  • 13
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    Changes in body weight and intake of food by Octopus vulgaris (2009)
    Wiley-Blackwell
    In:  Journal of Zoology, 150 (1). pp. 1-9.
    Details
    Publication Date: 2020-07-17
    Description: The changes in body weight of 12 octopuses, fed on fish or crabs, were followed under laboratory conditions for periods of 1 to 7 1/2 months. The food intake was estimated and compared with the changes in body weight of the octopuses; 25 to 55% of the total intake of food appeared to be incorporated. The range of the average increase in weight over the whole observation period of each of the animals was 1.9 to 7.7g per day (1 to 7 1/2 months); the mean value was 4.8g per day. The effect of changing the diet of small octopuses (fish or crab)was followed for four weeks but there was no evidence that alteration of the diet affected the rate of changes in body weight of animals of more than 47g initial body weight.
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  • 14
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    Complete assignments of NMR data of 13 hydroxymethoxyflavones (2007)
    Wiley-Blackwell
    In:  Magnetic Resonance in Chemistry, 45 (12). pp. 1072-1075.
    Details
    Publication Date: 2020-07-15
    Description: Diosmetin, 5,7,3′-trihydroxy-4′-methoxyflavone shows chemopreventive, antimutagenic, and antiallergic effects. On the other hand, chrysoeriol, 5,7,4′-trihydroxy-3′-methoxyflavone induced nodABC-lacZ in Rhizobium meliloti. Both of them belong to hydroxymethoxy- flavones. One major difference between diosmetin and chrysoeriol is the substituted position of hydroxyl and methoxyl groups. In order to elucidate the relationships between their structures and activity, one of the first things to be done is the determination of their structures. However, most flavones occur widely in nature, and thus it is difficult to obtain in sufficient amounts from natural sources to identify their structures. Assignments of NMR data of several hydroxymethoxyflavones may help us to identify novel flavonoid compounds isolated from natural sources based on their NMR experiments. Therefore, we report here the complete assignments of 1H and 13C NMR data of 13 hydroxymethoxyflavones.
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  • 15
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    Reproduction in the genus Limacina (Opisthobranchia: Thecosomata) (2009)
    Wiley-Blackwell
    In:  Journal of Zoology, 186 (1). pp. 95-108.
    Details
    Publication Date: 2020-07-17
    Description: Reproductive mechanisms in the seven species of the thecosomatous pteropod genus Limacina are described and compared. All species are protandrous hermaphrodites. Five species–L. bulimoides, L. helicina, L. lesueuri, L. retroversa and L. trochiformis–have a similar reproductive anatomy in which the gonoduct leading from the gonad to the common genital pore functions as a seminal vesicle in the male and is elaborated into mucous and albumen glands in the female. The male system consists of a prostate gland and penis connected to the common genital pore by an external ciliary tract. All five species have a free-swimming veliger stage which hatches from free-floating egg masses. Limacina helicoides has the same reproductive anatomy but is ovoviviparous, with embryos retained in capsules in the mucous gland until they are juveniles of 50 mm in shell diameter. Limacina inflata lacks mucous and albumen glands and a penis; a spermatophore formed by the prostate gland is used in aphallic sperm transfer. This species exhibits brood protection with un-encapsulated embryos retained in the mantle cavity until they are released as veligers measuring 0067 mm in diameter. L. inflata is the most abundant of the seven species despite lowered fecundity; reasons for its ecological success are discussed.
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  • 16
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    Patterns of Fouling on a Global Scale (2009)
    Wiley-Blackwell
    In:  In: Biofouling. , ed. by Dürr, S. and Thomason, J. Wiley-Blackwell, Weinheim, pp. 73-86. ISBN 978-1-4051-6926-4
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    Publication Date: 2012-02-23
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  • 17
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    Factors Controlling the Abundance and Size Distribution of the Phototrophic Ciliate Myrionecta rubrain Open Waters of the North Atlantic (2008)
    Wiley-Blackwell
    In:  Journal of Eukaryotic Microbiology, 55 (5). pp. 457-465.
    Details
    Publication Date: 2020-07-24
    Description: Myrionecta rubra, a ubiquitous planktonic ciliate, has received much attention due to its wide distribution, occurrence as a red tide organism, and unusual cryptophyte endosymbiont. Although well studied in coastal waters, M. rubra is poorly examined in the open ocean. In the Irminger Basin, North Atlantic, the abundance of M. rubra was 0–5 cells/ml, which is low compared with that found in coastal areas. Distinct patchiness (100 km) was revealed by geostatistical analysis. Multiple regression indicated there was little relationship between M. rubra abundance and a number of environmental factors, with the exception of temperature and phytoplankton biomass, which influenced abundance in the spring. We also improve on studies that indicate distinct size classes of M. rubra; we statistically recognise four significantly distinct width classes (5–16, 12–23, 18–27, 21–33 μm), which decrease in abundance with increasing size. A multinomial logistic regression revealed the main variable correlated with this size distribution was ambient nitrate concentration. Finally, we propose a hypothesis for the distribution of sizes, involving nutrients, feeding, and dividing of the endosymbiont.
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  • 18
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    Seed Composition, Seedling Emergence and Early Seedling Vigour of Red Kidney Bean Seed Produced at Elevated Temperature and Carbon Dioxide (2009)
    Wiley-Blackwell
    In:  Journal of Agronomy and Crop Science, 195 (2). pp. 148-156.
    Details
    Publication Date: 2020-07-27
    Description: Understanding the influence of growth temperature and carbon dioxide (CO2) on seed quality in terms of seed composition, subsequent seedling emergence and early seedling vigour is important under present and future climates. The objective of this study was to determine the combined effects of elevated temperature and CO2 during seed-filling of parent plants on seed composition, subsequent seedling emergence and seedling vigour of red kidney bean (Phaseolus vulgaris). Plants of cultivar ‘Montcalm’, were grown at daytime maximum/nighttime minimum sinusoidal temperature regimes of 28/18 and 34/24 °C at ambient CO2 (350 μmol mol−1) and at elevated CO2 (700 μmol mol−1) from emergence to maturity. Seed size and seed composition at maturity and subsequent per cent emergence, early seedling vigour (rate of development) and seedling dry matter production were measured. Elevated CO2 did not influence seed composition, emergence, or seedling vigour of seeds produced either at 28/18 or 34/24 °C. Seed produced at 34/24 °C had smaller seed size, decreased glucose concentration, but significantly increased concentrations of sucrose and raffinose compared to 28/18 °C. Elevated growth temperatures during seed production decreased the subsequent per cent emergence and seedling vigour of the seeds and seedling dry matter production of seed produced either at ambient or elevated CO2.
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  • 19
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    Correlation and characterisation of individual glass shards from tephra deposits using trace element laser ablation ICP-MS analyses: current status and future potential (2007)
    Wiley-Blackwell
    In:  Journal of Quaternary Science, 22 (7). pp. 721-736.
    Details
    Publication Date: 2015-09-01
    Description: Laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS) is a high spatial resolution analytical method which has been applied to the analysis of silicic tephras. With current instrumentation, around 30 trace elements can be determined from single glass shards as small as ∼ 40 µm, separated from tephra deposits. As a result of element fractionation during the ablation process using a 266 nm laser, a relatively complex calibration strategy is required. Nonetheless, such a strategy gives analyses which are accurate (typically within ±5%) and have an analytical precision which varies from ∼ ±2% at 100 ppm, to ∼ ±15% at 1 ppm. Detection limits for elements used in correlation and discrimination studies are well below 1 ppm. Examples of the application of trace element analysis by LA-ICP-MS in tephra studies are presented from the USA, New Zealand and the Mediterranean. Improvements in instrumental sensitivity in recent years have the potential to lower detection limits and improve analytical precision, thus allowing the analysis of smaller glass shards from more distal tephras. Laser systems operating at shorter wavelengths (e.g. 193 nm) are now more widely available, and produce a much more controllable ablation in glasses than 266 nm lasers. Crater sizes of 〈10 µm are easily achieved, and at 193 nm many of the elemental fractionation issues which mar longer wavelengths are overcome. By coupling a short wavelength laser to a modern ICP-MS it should be possible to determine the trace element composition of glass shards as small as 20 µm and, providing sample preparation issues can be overcome, the determination of the more abundant trace elements in glass shards as small as 10 µm is within instrumental capabilities. This will make it possible to chemically fingerprint tephra deposits which are far from their sources, and will greatly extend the range over which geochemical correlation of tephras can be undertaken.
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  • 20
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    Ecological speciation in marinev.freshwater fishes (2009)
    Wiley-Blackwell
    In:  Journal of Fish Biology, 75 (5). pp. 960-996.
    Details
    Publication Date: 2015-09-14
    Description: Absolute barriers to dispersal are not common in marine systems, and the prevalence of planktonic larvae in marine taxa provides potential for gene flow across large geographic distances. These observations raise the fundamental question in marine evolutionary biology as to whether geographic and oceanographic barriers alone can account for the high levels of species diversity observed in marine environments such as coral reefs, or whether marine speciation also operates in the presence of gene flow between diverging populations. In this respect, the ecological hypothesis of speciation, in which reproductive isolation results from divergent or disruptive natural selection, is of particular interest because it may operate in the presence of gene flow. Although important insights into the process of ecological speciation in aquatic environments have been provided by the study of freshwater fishes, comparatively little is known about the possibility of ecological speciation in marine teleosts. In this study, the evidence consistent with different aspects of the ecological hypothesis of speciation is evaluated in marine fishes. Molecular approaches have played a critical role in the development of speciation hypotheses in marine fishes, with a role of ecology suggested by the occurrence of sister clades separated by ecological factors, rapid cladogenesis or the persistence of genetically and ecologically differentiated species in the presence of gene flow. Yet, ecological speciation research in marine fishes is still largely at an exploratory stage. Cases where the major ingredients of ecological speciation, namely a source of natural divergent or disruptive selection, a mechanism of reproductive isolation and a link between the two have been explicitly documented are few. Even in these cases, specific predictions of the ecological hypothesis of speciation remain largely untested. Recent developments in the study of freshwater fishes illustrate the potential for molecular approaches to address specific questions related to the ecological hypothesis of speciation such as the nature of the genes underlying key ecological traits, the magnitude of their effect on phenotype and the mechanisms underlying their differential expression in different ecological contexts. The potential provided by molecular studies is fully realized when they are complemented with alternative (e.g. ecological, theoretical) approaches.
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  • 21
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    Macrophyte Canopy Structure and the Success of an Invasive Marine Bivalve (1999)
    Wiley-Blackwell
    In:  Oikos, 84 (3). p. 398.
    Details
    Publication Date: 2015-02-09
    Description: In both terrestrial and aquatic environments introductions of non-indigenous species are continuing and represent one important component of global change. Negative biotic interactions by resident species may prevent successful invaders from becoming pests. Few experimental data are available on the presence and significance of such biotic resistance other than predation or competition. This study addresses the role of habitat structure provided by a native eelgrass (Zostera marina) canopy on growth and survival of the non-indigenous mussel Musculista senhousia, a habitat-modifying gregarious suspension feeder with strong effects on native infauna and eelgrass. In 2 southern California bays, a series of transplantation experiments using tagged mussels revealed that inside an eelgrass canopy, Musculista growth rates were reduced by more than half in 3 of 4 experiments compared to adjacent unvegetated areas. Musculista survival also decreased inside the vegetation in a 4-mo experiment. As one element of habitat structure, we tested the effects of eelgrass patch size, using natural (1 site) and planted (1 site) eelgrass patches of defined sizes. Growth rates of Musculista were highest outside the vegetation and decreased as eelgrass patch size increased. As a potential mechanism for the canopy effects, we suggest that Musculista receives less food inside the vegetation. In the experimental plots, the presence and spatial extent of the macrophyte canopy strongly affected near bottom (10 cm) horizontal water flow assessed with a direct dye tracking method. Reduced mussel growth rates were linearly associated with lower water flow, and presumably, food flux. Over a period of 7 mo, food resources (particulate chlorophyll a) were consistently lower 1 and 5 cm above the sea floor inside eelgrass patches compared to the sand flat. The reduction in food availability matched the growth reduction of Musculista. Also, mussel condition (dry flesh mass/shell mass) was worse in individuals growing in eelgrass than in the sand flat. Previous experiments revealed that dense beds of Musculista impede the rhizome growth and vegetative propagation of eelgrass, yet mussels attain abundances sufficient for interference only if eelgrass beds are patchy. Thus, anthropogenic disturbances on eelgrass beds, which often result in meadow fragmentation, and the proliferation of Musculista may have synergistic negative effects on the persistence of eelgrass beds.
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  • 22
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    Analysis of Stable Isotope Data: A K Nearest-Neighbors Randomization Test (1998)
    Wiley-Blackwell
    In:  The Journal of Wildlife Management, 62 (1). pp. 380-388.
    Details
    Publication Date: 2020-05-11
    Description: The use of stable isotope analysis in ecological and wildlife studies is rapidly increasing. Studies include evaluating flow of nutrients in ecosystems and studying dietary composition of individual animals. Several mixing models have been developed to evaluate the relative contribution of different foods to the diet of consumers. All these mixing models require that all prey types will be significantly different in bivariate space. This requirement usually poses a problem in analyzing data of stable isotope ratios because sample sizes in most studies are small and seldom normally distributed. We propose a randomization test that we based on the K nearest-neighbor approach. Results from our simulations of power revealed that the K nearest-neighbor test appears to have high power even with small sample sizes and comparatively low displacement. The K nearest-neighbor test described here provides the preliminary statistical analysis necessary for the use of the mixing models, and therefore is a new, powerful tool for analyzing stable isotope data. In evaluating the test performance on data collected from American martens (Martes americana) and their prey on Chichagof Island, Southeast Alaska, we were able to reject our null hypothesis that all samples of prey were drawn from identical populations (P = 0.05). A program written in Pascal or S-Plus is available from the authors to evaluate the K nearest-neighbor statistic for several groups.
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  • 23
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    Extraordinary snow accumulations over parts of central Europe during the winter of 2005/06 and weather-related hazards (2007)
    Wiley-Blackwell
    In:  Weather, 62 (1). pp. 16-21.
    Details
    Publication Date: 2020-04-28
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  • 24
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    Groundwater discharges in the Baltic Sea: survey and quantification using a schlieren technique application (2006)
    Wiley-Blackwell
    In:  Geofluids, 6 . pp. 241-250. Date online first: 2006
    Details
    Publication Date: 2017-08-02
    Description: Groundwater seeps are known to occur in Eckernförde Bay, Baltic Sea. Their discharge rate and dispersion were investigated with a new schlieren technique application, which is able to visualize heterogeneous water parcels with density anomalies down to Drt ¼ 0.049 on the scale of millimeters. With the use of an inverted funnel, discharged fluids can be captured and the outflow velocity can be determined. Overall, 46 stations could be categorized by three different cases: active vent sites, seep-influenced sites, and non-seep sites. New seep locations were discovered, even at shallow near-shore sites, lacking prominent sediment depression, which indicate submarine springs. The detection of numerous seeps was possible and the groundwater-influenced area was defined to be approximately 6.3 km2. Flow rates of between 0.05 and 0.71 l m)2 min)1 were measured. A single focused fluid plume, which was not disturbed by the funnel was recorded and revealed a flux of 59.6 ± 20 ml cm)2 min)1 and it was calculated that this single focused plume would be strong enough to produce a flow rate through the funnel of 1.32 ± 0.44 l m)2 min)1. The effect of different seep-meter funnel sizes is discussed.
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  • 25
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    Epibiosis (2009)
    Wiley-Blackwell
    In:  In: Biofouling. , ed. by Dürr, S. and Thomason, J. Wiley-Blackwell, Weinheim, pp. 100-108. ISBN 978-1-4051-6926-4
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    Publication Date: 2012-02-23
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  • 26
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    Partitioning average competition and extreme-genotype effects in genetically diverse infections (2008)
    Wiley-Blackwell
    In:  Oikos, 117 . pp. 399-405.
    Details
    Publication Date: 2017-01-31
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  • 27
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    Indirect effects of epibiosis on host mortality: Seastar predation on differently fouled mussels (1999)
    Wiley-Blackwell
    In:  Marine Ecology, 20 (1). pp. 35-47.
    Details
    Publication Date: 2020-07-14
    Description: In situ experiments were run with the seastar Asterias rubens to investigate the influence of epibiosis on predation preferences. Mussels (Mytilus edulis) monospecifically fouled by different epibiont species (the barnacle Balanus improvisus, the red filamentous alga Ceramium strictum, the sponge Halichondria panicea and the hydrozoan Laomedea flexuosa) and macroscopically clean mussels were exposed and seastar predation was monitored by SCUBA. Asterias rubens preferred macroscopical unfouled mussels as prey. Fouling generally reduced predation pressure on the mussel hosts (associational resistance). Barnacles protected mussels less efficiently than hydrozoans or algae. We hypothesize that in top-down controlled communities this influence of epibiosis on predation pressure should affect mussel community patterns. A survey of natural mussel-epibiont distribution in the presence or absence of A. rubens showed that the prevalence of differently fouled mussels differed between predation-exposed and predation-protected habitats. Natural mussel-epibiont associations reflected the preferential predation of the major local predators. Additionally, higher epibiotic diversity and evenness could be observed at locations accessible to benthic predators as compared with habitats protected from predation. As blue mussels and seastars are important structuring and controlling elements in the shallow water community of Kiel Fjord, major consequences of epibiosis on the entire system are discussed.
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  • 28
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    Seeking a Holocene drift ice proxy: non-clay mineral variations from the SW to N-central Iceland shelf: trends, regime shifts, and periodicities (2009)
    Wiley-Blackwell
    In:  Journal of Quaternary Science, 24 (7). pp. 664-676.
    Details
    Publication Date: 2016-06-29
    Description: Quantitative X-ray diffraction analysis of the 〈2mm sediment fraction was carried out on 1257 samples (from the seafloor and 16 cores) from the Iceland shelf west of 188 W. All but one core (B997-347PC) were from transects along troughs on theNW to N-central shelf, an area that in modern and historic times has been affected by drift ice. The paper focuses on the non-clay mineralogy of the sediments (excluding calcite and volcanic glass). Quartz and potassium feldspars occupy similar positions in an R-mode principal component analysis, and oligoclase feldspar tracks quartz; these minerals are used as a proxy for ice-rafted detritus (IRD). Accordingly, the sum of these largely foreign minerals (Q&K) (to Icelandic bedrock) is used as a proxy for drift ice. A stacked, equi-spaced 100 a record is developed which shows both low-frequency trends and higher-frequency events. The detrended stacked record compares well with the flux of quartz (mg cm-2 a-1) at MD99-2269 off N Iceland. The multi-taper method indicated that there are three significant frequencies at the 95% confidence level with periods of ca. 2500, 445 and 304 a. Regime shift analysis pinpoints intervals when there was a statistically significant shift in the average Q&K weight %, and identifies four IRDrich events separated by intervals with lower inputs. There is some association between peaks of IRD input, less dense surface waters (from d18O data on planktonic foraminifera) and intervals of moraine building.
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  • 29
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    Nutritional condition and vertical distribution of Baltic cod larvae (1997)
    Wiley-Blackwell
    In:  Journal of Fish Biology, 51 (Suppl. A.). pp. 352-369.
    Details
    Publication Date: 2017-09-08
    Description: Newly hatched Baltic cod Gadus morhua larvae are typically found at depths 〉60 m. This is a region of low light and prey availability, hence generating the hypothesis that larvae have to migrate from hatching depth to the surface layer to avoid starvation and improve their nutritional condition. To test this hypothesis, Baltic cod larvae were sampled during the spawning seasons of 1994 and 1995 with depth-resolving multiple opening/closing nets. Each larva was aged by otolith readings and its RNA/DNA ratio was determined as a measure of nutritional condition. The RNA/DNA ratios of these larvae aged 2-25 days (median 10 days) ranged from 0.4 to 6.2, corresponding to levels exhibited by starving and fast-growing larvae in laboratory calibration studies (starvation, protein growth rate, Gpi= -12.2% day−1; fastgrowing larvae, Gpi=14.1%day−1) respectively. Seventy per cent of the field caught larvae had RNA/DNA ratios between the mean values found for starving and fed laboratory larvae. Only larvae aged 8-11 days had higher mean RNA/DNA ratios above 45 m than below (t-test, P〈0.05). However, the instantaneous protein growth rates were significantly higher for all larval age groups in the surface layers (t-test, P〈0.05). Starving larvae were found in all depths sampled (10-85 m), whereas growing larvae (positive Gpi) were restricted to samples taken shallower than 45 m. These superior growth rates above 45 m corroborate the hypothesis and imply that migration to the shallow water layers is a prerequisite for good nutritional condition, growth and survival of Baltic cod larvae. The frequent occurrence of cod larvae older than 8 days in the deep water in poor condition suggests that a proportion of the larvae will die from Starvation in the deep layers of the Baltic Sea.
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  • 30
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    Effects of egg size, parental origin and feeding conditions on growth of larval and juvenile cod Gadus morhua (2009)
    Wiley-Blackwell
    In:  Journal of Fish Biology, 75 . pp. 516-537.
    Details
    Publication Date: 2017-09-14
    Description: An experimental study was performed to disentangle parental and environmental effects on the growth of Atlantic cod Gadus morhua larvae and juveniles. Eggs were collected during the spawning season from spawning pairs (families) kept separately in specially designed spawning compartments. Newly hatched larvae were released simultaneously into two mesocosms of 2500 and 4400 m3. Larval growth was monitored by sampling over a 10 week period, after which juveniles were transferred to on-growing tanks, where they were tagged and kept for up to 2 years. Maternal origin was determined by individual microsatellite genotyping of the larvae (n = 3949, 24 families) and juveniles (n = 600). The results showed significant positive correlations between egg size and larval size during the whole mesocosm period. Correlations, however, weakened with time and were no longer significant at the first tank-rearing sampling at an age of 9 months. Significant family-specific differences in growth were observed. The coefficient of variation (c.v.) was calculated in order to examine variation in standard length of larvae during the mesocosm period. Inter-family c.v. was on average 69% of intra-family c.v. Differences in zooplankton densities between the two mesocosms were reflected in larval growth, condition factor and c.v. Low food abundance appeared to reduce c.v. and favour growth of larvae that showed relatively slow growth at high food abundance. It is suggested that genetically determined variation in growth potential is maintained by environmental variability.
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  • 31
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    The annual cycle of heavy precipitation across the United Kingdom: a model based on extreme value statistics (2009)
    Wiley-Blackwell
    In:  International Journal of Climatology, 29 (12). pp. 1731-1744.
    Details
    Publication Date: 2020-03-19
    Description: The annual cycle of extreme 1-day precipitation events across the UK is investigated by developing a statistical model and fitting it to data from 689 rain gauges. A generalized extreme-value distribution (GEV) is fit to the time series of monthly maxima, across all months of the year simultaneously, by approximating the annual cycles of the location and scale parameters by harmonic functions, while keeping the shape parameter constant throughout the year. We average the shape parameter of neighbouring rain gauges to decrease parameter uncertainties, and also interpolate values of all model parameters to give complete coverage of the UK. The model reveals distinct spatial patterns for the estimated parameters. The annual mean of the location and scale parameter is highly correlated with orography. The annual cycle of the location parameter is strong in the northwest UK (peaking in late autumn or winter) and in East Anglia (where it peaks in late summer), and low in the Midlands. The annual cycle of the scale parameter exhibits a similar pattern with strongest amplitudes in East Anglia. The spatial patterns of the annual cycle phase suggest that they are linked to the dominance of frontal precipitation for generating extreme precipitation in the west and convective precipitation in the southeast of the UK. The shape parameter shows a gradient from positive values in the east to negative values in some areas of the west. We also estimate 10-year and 100-year return levels at each rain gauge, and interpolated across the UK.
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  • 32
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    Concealment in epipelagic pterotracheid heteropods (Gastropoda) and cranchiid squids (Cephalopoda) (2009)
    Wiley-Blackwell
    In:  Journal of Zoology, 210 (1). pp. 137-147.
    Details
    Publication Date: 2020-07-17
    Description: Epipelagic pterotracheid heteropods and young cranchiid squids rely primarily on transparency for concealment; yet they have opaque structures, the eyes and visceral organs that compose the visceral nuclei, which can only be camouflaged in other ways. These two groups have achieved convergent solutions to this problem. The visceral nucleus has a narrow and conical shape and a covering layer of iridophores that lies parallel to the surface of the organ. The eyes also have iridophore layers and tapered shapes. A minimal ventral silhouette results when the long axes of the visceral nucleus and eyes are oriented vertically, with the narrowest ends directed downward. In pterotracheids, this is actively achieved by tilting the nucleus and eyes and flexing the body and proboscis. In cranchiids, tilting of the organs alone suffices and adjustments are accomplished much more rapidly than in the pterotracheids.
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  • 33
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    Coccolithophores as palaeoecological indicators for shifts of the ITCZ in the Cariaco Basin during the late Quaternary (2009)
    Wiley-Blackwell
    In:  Journal of Quaternary Science, 24 (2). pp. 159-174.
    Details
    Publication Date: 2016-07-28
    Description: Coccoliths were studied from the ODP Hole 1002C and core PL07-39PC in the Cariaco Basin. Increases in Emiliania huxleyi are synchronous with decreases of Gephyrocapsa oceanica and vice versa. A new index (GEX) based on the relative abundances of these two taxa is proposed, and correlates with various other proxies. It is shown that GEX can serve as upwelling proxy. This confirms that the Intertropical Convergence Zone shifted north during the Bølling/Allerød, south during the Younger Dryas and back north during the Preboreal. The upwelling proxy shows few discrepancies with the terrigenous record.
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  • 34
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    Identification of the Fugloyarbanki tephra in the NGRIP ice core: a key tie‐point for marine and ice‐core sequences during the last glacial period (2008)
    Wiley-Blackwell
    In:  Journal of Quaternary Science, 23 (5). pp. 409-414.
    Details
    Publication Date: 2016-05-27
    Description: A visible tephra horizon in the NGRIP ice core has been identified by geochemical analysis as the Fugloyarbanki Tephra, a widespread marker horizon in marine cores from the Faroe Islands area and the northern North Atlantic. An age of 26 740 ± 390 yr b2k (1s uncertainty) is derived for this tephra according to the new Greenland Ice Core Chronology (GICC05) based on multiparameter counting of annual layers. Detection of this tephra for the first time within the NGRIP ice core provides a key tie-point between marine and ice-core records during the transition between MIS 3 and 2. Identification of this volcanic event within the Greenland records demonstrates the future potential of using tephrochronology to precisely correlate palaeoarchives in widely separated localities that span the last glacial period, as well as providing a potential method for examining the extent of the radiocarbon marine reservoir effect at this time.
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  • 35
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    Food of the cuttlefish Sepia officinalis and S. elegans in the Ria de Vigo (NW Spain) (Mollusca: Cephalopoda) (2009)
    Wiley-Blackwell
    In:  Journal of Zoology, 207 (4). pp. 511-519.
    Details
    Publication Date: 2020-07-17
    Description: A study of the diet of Sepia officinalis and S. elegans in the Ria de Vigo has shown that crustaceans are the most abundant prey in both species, followed by fish. Changes in the food composition of both species occur with growth. The type of prey eaten by the two sexes of these species is very similar. The possibility of trophic competition between juveniles of S. qficinalis and S. elegans is discussed.
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  • 36
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    Temporal variability of disturbances: is this important for diversity and structure of marine fouling assemblages? (2007)
    Wiley-Blackwell
    In:  Marine Ecology, 28 (3). pp. 1-9.
    Details
    Publication Date: 2017-10-05
    Description: Natural communities are constantly changing due to a variety of interacting external processes and the temporal occurrence and intensity of these processes can have important implications for the diversity and structure of marine sessile assemblages. In this study, we investigated the effects of temporal variation in a disturbance regime, as well as the specific timing of events within different regimes, on the composition and diversity of marine subtidal fouling assemblages. We did this in a multi-factorial experiment using artificial settlement tiles deployed at two sites on the North East coast of England. We found that although there were significant effects of disturbances on the composition of assemblages, there were no effects of either the variation in the disturbance regime or the specific timing of events on the diversity or assemblage composition at either site. In contrast to recent implications we conclude that in marine fouling assemblages, the variability in disturbance regimes (as a driving force) is unimportant, while disturbance itself is an important force for structuring robust ecosystems.
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  • 37
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    The potential geographical distribution of the Cane Toad, Bufo marinus in Australia (1996)
    Wiley-Blackwell
    In:  Conservation Biology, 10 (1). pp. 294-299.
    Details
    Publication Date: 2019-09-19
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  • 38
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    Protistan grazing on marine bacterioplankton (2008)
    Wiley-Blackwell
    In:  In: Microbial Ecology of the Oceans. Wiley-Blackwell, Hoboken, NJ, pp. 383-441. 2. Edition ISBN 978-0-470-04344-8
    Details
    Publication Date: 2019-12-06
    Type: Book chapter , NonPeerReviewed
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  • 39
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    Waking the dead: the value of population genetic analyses of historical samples (2008)
    Wiley-Blackwell
    In:  Fish and Fisheries, 9 (4). pp. 450-461.
    Details
    Publication Date: 2016-12-13
    Description: Archived scales and otoliths constitute a unique source of DNA that potentially enables extension of the temporal scale of genetic studies of fish populations by decades and even centuries. We review recent insights into fish population and conservation genetics obtained using analysis of DNA from archived samples. This involves both new knowledge about demographic parameters and population structure in wild populations and insights into consequences of anthropogenic pressure resulting from over-harvesting, habitat degradation and stocking. We show that the latter category of studies have led to significant changes of management practices. Ongoing improvement of genetic methods will undoubtedly further expand the ability to utilize historical DNA samples. We envisage that temporal comparisons of large numbers of coding genes will lead to novel insights into selective responses of fish populations to anthropogenic challenges, particularly fisheries-induced selection and global warming. However, both acquisition and storage of historical DNA samples can be hurdles to temporal genetic analyses, while degradation and low copy number in historical DNA samples render genetic data from such sources prone to technical artefacts. We summarize recommendations for storage of samples and DNA extraction and provide checklists for validation of genotyping results. Finally, we stress that validation procedures also involve documentation of the time and population of origin of historical samples, and the inferences drawn should account for the technical and statistical uncertainties associated with historical DNA analysis.
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  • 40
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    Sea birds as proxies of marine habitats and food webs in the western Aleutian Arc (1996)
    Wiley-Blackwell
    In:  Fisheries Oceanography, 5 (1). pp. 45-55.
    Details
    Publication Date: 2020-11-16
    Description: We propose that ocean conditions of the Near Islands in the western Atleutian Arc mimic those of the shallow continental shelf of the eastern Bering Sea to the extent that the marine community, including assemblages of forage fishes and their avian predators, has disinctly coastal characteristics. In contrast, marine avifauna and their prey at neighbouring Buldir Island are distinctly oceanic. For example, at the Near Islands, the ratio of thick-billed to common murres, Uria lomvia and U. aalge, is low and black.legged kittiwakes, Rissa tridacytla, but not red-legged kittiwakes, R. brevirostris, nest there. Diets of murres and kittiwkaes are dominated by sand lance, Ammodytes hexapterus, an abundant coastal species. At Buldir Island, thick-billed murres greatly outnumber common murres, red-legged kittiwakes and black-legged kittiwakes are both abundant, and diets of the birds consist primarily of oceanic squid and lantern-fish (Myctophidae). This mesoscale difference in food webs is apparently a consequence of the local physiography. A broad escarpment on the Near physiographic block creates a comparatively expansive, shallow, shelf-like habitat around the Near Islands, where a pelagic community typical of coastal regions flourished. Buldir Island is the only emergent feature of the Buldir physiographic block, with little shallow water surrounding it and, apparently, little opportunity for other than oceanic species to exist. Patterns in the distribution of fishes, and thus of sea birds, throughout the Atleutian Islands might be largely explained by the relationship between physical environments and food webs. In the larger context of fisheries oceanography, this model for the Aleutian Islands improves our ability to interpret physical and biological heterogeneity in the ocean and its relationship to regional community dynamics and trends in the abundance and productivity of individual species at higher tropic levels.
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  • 41
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    Episodic Quaternary volcanism in France and Germany (2006)
    Wiley-Blackwell
    In:  Journal of Quaternary Science, 21 (6). pp. 645-675.
    Details
    Publication Date: 2018-10-22
    Description: Intra‐plate volcanism in western Europe shows statistically significant episodicity during the Quaternary period. By comparing the known ages for eruptions in France and Germany, which are compiled here, with a composite oxygen isotope record, we have investigated the link between this episodic volcanism and the climate record over the last two million years. We show that increased volcanism between 415–400 ka and 17–5 ka correlates with warming phases at the end of the last Weichselian (Devensian) and earlier Elsterian (Anglian) glacial stages. The three significant caldera explosions in the eastern Eifel, Germany, are all associated with warming phases at the onset of interglacials. The growth and decay of nearby ice sheets suggest that surface changes in continental mass distribution during glacial Milankovich cycles could provide a mechanism for this correlation by means of the distal effects of flexural loading on the lithosphere.
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  • 42
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    Growth of swimming muscles and its metabolic cost in larvae of whitefish (Coregonus lavaretus) at different temperatures (1996)
    Wiley-Blackwell
    In:  Journal of Fish Biology, 48 . pp. 937-951.
    Details
    Publication Date: 2017-07-12
    Description: The temperature relationship of routine metabolic rate (Rr) of non-feeding, non-growing Coregonus lavaretus larvae between 2 and 15°C is characterized by Q10-values ranging from l.8-2.45. The rate of growth, based on weight determinations, of first-feeding larvae amounted to 3.5, 7.6 and 9.4% day-1 at 5, 10 and 12°C respectively, from which Q10-values between 4.0 and 4.8 can be calculated. The rate of increase of muscle mass between 5 and 10°C, based on the determination of the cross-sectional area of inner muscle fibres, resulted in a Q10-value of 4.5. Water temperature influenced the pattern of growth of the inner muscle fibres. At hatching, after 360 day degrees, total muscle mass of larvae reared at 4 and 8°C was independent of temperature, but at 4°C the rate of mass increase owed more to hyperplasia (increase in fibre number) than to hypertrophy (increase in fibre mass), whereas at 8°C the opposite was the case. The calculation of power budgets (including the metabolic cost of growth) of first-feeding larvae yielded net conversion efficiencies (K2) increasing with temperature from 46.3% at 5°C to 54.7% at 12°C. Comparing our data with literature data two general conclusions can be drawn. (1) In first-feeding larvae the net, but not the gross, conversion efficiency of food energy increases with temperature. This is due to net energy input being characterized by a much higher Q10-value than energy expenditures. (2) In embryos of freshwater fish so far investigated hyperplasia plays a greater role in the increase of fibre mass than hypertrophy at the lower temperature, whereas in embryos of marine fish hyperplasia prevails at the higher temperature. It is suggested that this discrepancy correlates with the high concentration of free amino acids in the eggs of marine species which provide an additional, easily available, source of metabolic energy absent in freshwater species.
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  • 43
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    Ontogenic changes in the allometric scaling of the mass-length relationship in sprat (〈em〉Sprattus sprattus〈/em〉) (2005)
    Wiley-Blackwell
    In:  Journal of Fish Biology, 66 . pp. 882-887.
    Details
    Publication Date: 2017-09-14
    Description: An analysis of mass (M) and standard length (LS) data for larval, juvenile and adult sprat (Sprattus sprattus; Clupeidae) revealed marked changes in the allometric scaling factor (b in inline image). For sprat 〈44 mm LS, b was 5·0, whereas in larger juveniles and adults, b was c. 3·4 indicating a relatively protracted metamorphic period for this species.
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  • 44
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    Disentangling the role of MHC-dependent 'good genes' and 'compatible genes' in mate choice decisions of three-spined sticklebacks under semi-natural conditions (2009)
    Wiley-Blackwell
    In:  Journal of Fish Biology, 75 (8). pp. 2122-2142.
    Details
    Publication Date: 2019-09-11
    Description: To investigate and disentangle the role of major histocompatibility complex (MHC)‐based ‘good genes' and ‘compatible genes' in mate choice, three‐spined sticklebacks Gasterosteus aculeatus with specific MHC IIB genotypes were allowed to reproduce in an outdoor enclosure system. Here, fish were protected from predators but encountered their natural parasites. Mate choice for an intermediate genetic distance between parental MHC genotypes was observed, which would result in intermediate diversity in the offspring, but no mate choice based on good genes was found under the current semi‐natural conditions. Investigation of immunological variables revealed that the less‐specific innate immune system was more active in individuals with a genetically more divergent MHC allele repertoire. This suggests the need to compensate for an MHC‐diminished T‐cell repertoire and potentially explains the observed mate choice for intermediate MHC genetic distance. The present findings support a general pattern of mate choice for intermediate MHC diversity (i.e. compatible genes). In addition, the potentially dynamic role of MHC good genes in mate choice under different parasite pressures is discussed in the light of present and previous results.
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  • 45
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    Some Atlantic cod (Gadus morhua ) in the Baltic Sea visit hypoxic water briefly but often (2009)
    Wiley-Blackwell
    In:  Journal of Fish Biology, 75 . pp. 290-294.
    Details
    Publication Date: 2017-09-14
    Description: Individual behaviour of Atlantic cod Gadus morhua in the presence of hypoxic water was measured in situ in the vertically stratified Bornholm Basin of the Baltic Sea. Considering all recaptured individuals, the use of hypoxic habitat was comparable to data derived by traditional survey data, but some G. morhua had migrated towards the centre of the c.100 m deep basin and spent about a third of their time at oxygen saturation 〈50%, possibly to forage on zoobenthos. Maximal residence time per visit in such hypoxic water was limited to a few hours, allowing for the digestion of consumed prey items in waters with sufficient dissolved oxygen.
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    Seasonal growth of wild Atlantic salmon juveniles and implications on age of smoltification (2006)
    Wiley-Blackwell
    In:  Journal of Fish Biology, 67 . pp. 1585-1602.
    Details
    Publication Date: 2017-09-14
    Description: The seasonal growth trajectories of wild Atlantic salmon Salmo salar juveniles by age group within the Margaree River, Canada, are described. Circuli counts from scales were used to infer growth rates at different ages and these were used to predict the proportions of age 2‐ and 3‐year old smolts from different portions of the watershed. In the wild Atlantic salmon juveniles from the Margaree River, there was no bimodality in fork length frequencies and no 1 year old smolts were produced. Water temperature differences during the growing season were insufficient to explain the differences in growth rates and size at age among the sites sampled. There was a positive association between the growth rate in the first year and the subsequent age at smoltification. In the Margaree River, differences in tributary specific growth rates and size at age were expected to produce important differences in the relative ages at smoltification.
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    Top-down and bottom-up control in an eelgrass-epiphyte system (2008)
    Wiley-Blackwell
    In:  Oikos, 117 (5). pp. 754-762.
    Details
    Publication Date: 2019-09-23
    Type: Article , PeerReviewed
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    Speciation accelerated and stabilized by pleiotropic major histocompatibility complex immunogenes (2009)
    Wiley-Blackwell
    In:  Ecology Letters, 12 (1). pp. 5-12.
    Details
    Publication Date: 2020-03-20
    Description: Speciation and the maintenance of recently diverged species has been subject of intense research in evolutionary biology for decades. Although the concept of ecological speciation has been accepted, its mechanisms and genetic bases are still under investigation. Here, we present a mechanism for speciation that is orchestrated and strengthened by parasite communities acting on polymorphic genes of the immune system. In vertebrates, these genes have a pleiotropic role with regard to parasite resistance and mate choice. In contrasting niches, parasite communities differ and thus the pools of alleles of the adapted major histocompatibility complex (MHC) also differ between niches. Mate choice for the best‐adapted MHC genotype will favour local adaptations and will accelerate separation of both populations: thus immune genes act as pleiotropic speciation genes –‘magic traits’. This mechanism should operate not only in sympatric populations but also under allopatry or parapatry. Each individual has a small subset of the many MHC alleles present in the population. If all individuals could have all MHC alleles from the pool, MHC‐based adaptation is neither necessary nor possible. However, the typically small optimal individual number of MHC loci thus enables MHC‐based speciation. Furthermore, we propose a new mechanism selecting against species hybrids. Hybrids are expected to have super‐optimal individual MHC diversity and should therefore suffer more from parasites in all habitats.
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    Applications of ecological stoichiometry for sustainable acquisition of ecosystem services (2005)
    Wiley-Blackwell
    In:  Oikos, 109 . pp. 52-62.
    Details
    Publication Date: 2017-01-31
    Description: Human activities have differentially altered biogeochemical cycling at local, regional and global scales. We propose that a stoichiometric approach, examining the fluxes of multiple elements and the ratio between them, may be a useful tool for better understanding human effects on ecosystem processes and services. The different scale of impacts of the elements carbon, nitrogen and phosphorus and the different nature of their biogeochemical cycles, imply a large variation of their stoichiometric ratios in space and time and thus divergent impacts on biota. In this paper, we examine the effects of anthropogenic perturbations on nutrient ratios in ecosystems in two examples and one case study. Altered stoichiometry in agricultural systems (example 1) can affect not only crop yield and quality but also the interactions between plants and their pollinators, pests and pathogens. Human activities have also altered stoichiometry in coastal ecosystems (example 2). Increased N loading has especially lead to increased N:P and reduced Si:N ratios, with detrimental effects on ecosystem services derived from coastal pelagic food webs, such as fish yield and water quality. The terrestrial–aquatic linkage in stoichiometric alterations is illustrated with a case study, the Mississippi River watershed, where anthropogenic activities have caused stoichiometric changes that have propagated through the watershed into the northern Gulf of Mexico. Coupled with altered stoichiometric nutrient inputs are the inherent differences in variation and sensitivity of different ecosystems to anthropogenic disturbance. Furthermore, the connections among the components of a watershed may result in downstream cascades of disrupted functioning. Applying a multiple element perspective to understanding and addressing societal needs is a new direction for both ecological stoichiometry and sustainability.
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    Empirical H/V spectral ratios estimated in two deep sedimentary basins using microseisms recorded by short-period seismometers (2009)
    Wiley-Blackwell
    Details
    Publication Date: 2021-06-22
    Description: In this work, we analyse continuous measurements of microseisms to assess the reliability of the fundamental resonance frequency estimated by means of the horizontal-to-vertical (H/V) spectral ratio within the 0.1–1 Hz frequency range, using short-period sensors (natural period of 1 s). We apply the H/V technique to recordings of stations installed in two alluvial basins with different sedimentary cover thicknesses—the Lower Rhine Embayment (Germany) and the Gubbio Plain (Central Italy). The spectral ratios are estimated over the time–frequency domain, and we discuss the reliability of the results considering both the variability of the microseism activity and the amplitude of the instrumental noise. We show that microseisms measured by short period sensors allow the retrieval of fundamental resonance frequencies greater than about 0.1–0.2 Hz, with this lower frequency bound depending on the relative amplitude of themicroseism signal and the self-noise of the instruments. In particular,we show an examplewhere the considered short-period sensor is connected to instruments characterized by an instrumental noise level which allows detecting only fundamental frequencies greater than about 0.4 Hz. Since the frequency at which the peak of the H/V spectral ratio is biased depends upon the seismic signal-to-instrument noise ratio, the power spectral amplitude of instrumental self-noise should be always considered when interpreting the frequency of the peak as the fundamental resonance frequency of the investigated site.
    Description: Published
    Description: 175-184
    Description: 4.1. Metodologie sismologiche per l'ingegneria sismica
    Description: JCR Journal
    Description: open
    Keywords: site effects ; fourier analysis ; 04. Solid Earth::04.06. Seismology::04.06.01. Earthquake faults: properties and evolution
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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    Gas hazard assessment at the Monticchio Mt. Vulture, a volcano in Southern Italy (2009)
    Wiley-Blackwell
    Details
    Publication Date: 2017-04-04
    Description: Geochemical investigations have shown that there is a considerable inflow of gas into both crater lakes of Monticchio, Southern Italy. These lakes are located in two maars that formed 140 000 years ago during Mt. Vulture volcano s last eruptive activity. Isotopic analyses suggest that CO2 and helium are of magmatic origin; the latter displays 3He ⁄ 4He isotope ratios similar to those measured in olivines of the maar ejecta. In spite of the fact that the amount of dissolved gases in the water is less than that found in Lake Nyos (Cameroon), both the results obtained and the historical reports studied indicate that these crater lakes could be highly hazardous sites, even though they are located in a region currently considered inactive. This could be of special significance in very popular tourist areas such as the Monticchio lakes, which are visited by about 30 000 people throughout the summer, for the most part on Sundays.
    Description: Published
    Description: 83-87
    Description: 2.4. TTC - Laboratori di geochimica dei fluidi
    Description: JCR Journal
    Description: reserved
    Keywords: volcanic gases ; gas hazard ; crater lakes ; 04. Solid Earth::04.04. Geology::04.04.12. Fluid Geochemistry ; 04. Solid Earth::04.08. Volcanology::04.08.01. Gases ; 04. Solid Earth::04.08. Volcanology::04.08.08. Volcanic risk
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    Seismic moment tensors of the April 2009, L’Aquila (Central Italy), (2009)
    Wiley-Blackwell
    Details
    Publication Date: 2017-04-04
    Description: On 2009 April 6, the Central Apennines were hit by an Mw = 6.3 earthquake. The region had been shaken since 2008 October by seismic activity that culminated in two foreshocks with Mw 〉 4, 1 week and a few hours before the main shock. We computed seismic moment tensors for 26 events with Mw between 3.9 and 6.3, using the Regional Centroid Moment Tensor (RCMT) scheme. Most of these source parameters have been computed within 1 hr after the earthquake and rapidly revised successively. The focal mechanisms are all extensional, with a variable and sometimes significant strike-slip component. This geometry agrees with the NE–SW extensional deformation of the Apennines, known from previous seismic and geodetic observations. Events group into three clusters. Those located in the southern area have larger centroid depths and a wider distribution of T-axis directions. These differences suggest that towards south a different fault systemwas activated with respect to the SW-dipping normal faults beneath L’Aquila and more to the north.
    Description: In press
    Description: 1.1. TTC - Monitoraggio sismico del territorio nazionale
    Description: JCR Journal
    Description: open
    Keywords: moment tensor ; seismotectonics ; L'Aquila ; 04. Solid Earth::04.07. Tectonophysics::04.07.04. Plate boundaries, motion, and tectonics
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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    The Mw 6.3, 2009 L’Aquila earthquake: source, path and site effects from spectral analysis of strong motion data (2009)
    Wiley-Blackwell
    Details
    Publication Date: 2017-04-04
    Description: The strong motion data of 2009 April 6 L’Aquila (Central Italy) earthquake (Mw = 6.3) and of 12 aftershocks (4.1 ≤ Mw ≤ 5.6) recorded by 56 stations of the Italian strong motion network are spectrally analysed to estimate the source parameters, the seismic attenuation, and the site amplification effects. The obtained source spectra for S wave have stress drop values ranging from 2.4 to 16.8 MPa, being the stress drop of the main shock equal to 9.2 MPa. The spectral curves describing the attenuation with distance show the presence of shoulders and bumps, mainly around 50 and 150 km, as consequence of significant reflected and refracted arrivals from crustal interfaces. The attenuation in the first 50 km is well described by a quality factor equal to Q( f ) = 59 f 0.56 obtained by fixing the geometrical spreading exponent to 1. Finally, the horizontal-to-vertical spectral ratio provides unreliable estimates of local site effects for those stations showing large amplifications over the vertical component of motion.
    Description: Published
    Description: 1573–1579
    Description: 4.1. Metodologie sismologiche per l'ingegneria sismica
    Description: JCR Journal
    Description: open
    Keywords: Generalized inversion ; strong-motion ; 04. Solid Earth::04.06. Seismology::04.06.04. Ground motion
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    Concentration of cofilin, a small actin-binding protein, at the cleavage furrow during cytokinesis (1995)
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 30 (1995), S. 1-7 
    Details
    ISSN: 0886-1544
    Keywords: actin ; cytoskeleton ; contractile ring ; microinjection ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Cofilin is a small actin-binding protein which reguiates actin polymerization in a pH-dependent manner. Immunofluorescence microscopy with a monoclonal antibody for cofilin revealed that this protein is temporarily concentrated at the contractile ring during cytokinesis. Cofilin appeared to accumulate rapidly at the contractile ring during late stages of furrowing, and was finally enriched at the midbody. The concentration of cofilin at the contractile ring was observed in several kinds of cultured cells. Furthermore, cofilin introduced into living cells by a microinjection method was also concentrated at the contractile ring. These results suggest that cofilin is involved in actin reorganization during cytokinesis. © 1995 Wiley-Liss, Inc.
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    Listeria monocytogenes intracellular migration: Inhibition by profilin, vitamin D-binding protein and DNase I (1995)
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 30 (1995), S. 38-49 
    Details
    ISSN: 0886-1544
    Keywords: Listeria monocytogenes ; actin ; profilin ; DNase I ; vitamin D-binding protein ; phalloidin ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Infection of host cells by Listeria monocytogenes results in the recruitment of cytoplasmic actin into a tail-like appendage that projects from one end of the bacterium. Each filamentous actin tail progressively lengthenes, providing the force which drives the bacterium in a forward direction through the cytoplasm and later results in Listeria cell-to-cell spread. Host cell actin monomers are incorporated into the filamentous actin tail at a discrete site, the bacterial-actin tail interface. We have studied the consequences of microinjecting three different actin monomer-binding proteins on the actin tail assembly and Listeria intracellular movement. Introduction of high concentrations of profilin (estimated injected intracellular concentration 11-22 m̈M) into infected PtK2 cells causes a marked slowing of actin tail elongation and bacterial migration. Lower intracellular concentrations of two other injected higher affinity monomer-sequenstering proteins, Vitamin D-binding protein (DBP; 1-2 m̈M) and DNase I (6-7 m̈M) completely block bacterial-induced actin assembly and bacterial migration. The onset of inhibition by each protein is gradual (10-20 min) indicating that the mechanisms by which these proteins interfere with Listeria-induced actin assembly are likely to be complex. To exclude the possibility that Listeria recruits preformed actin filaments to generate the tails and that these monomer-binding proteins act by depolymerizing such performed actin filaments, living infected cells have been injected with fluorescently labeled phalloidin (3 m̈M). Although the stress fibers are labeled, no fluorescent phalloidin is found in the tails of the moving bacteria. These results demonstrate that Listeria-induced actin assembly in PtK2 cells is the result of assembly of actin monomers into new filaments and that Listeria's ability to recruit polymerization competent monomeric actin is very sensitive to the introduction of exogenous actin monomer-binding proteins. © 1995 Wiley-Liss, Inc.
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    Dynamics of triton-insoluble and triton-soluble F-actin pools in calcium-activated human polymorphonuclear leukocytes: Evidence for regulation by gelsolin (1995)
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 30 (1995), S. 136-145 
    Details
    ISSN: 0886-1544
    Keywords: microfilamentous cytoskeleton ; actin binding proteins ; actin polymerization ; annealing ; non-muscle cells ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Gelsolin, a Ca++ activated, 90 kd actin binding protein, can regulate actin polymerization in polymorphonuclear leukocytes (PMNs) via severing of filaments to dissolve gels or by capping of filament ends to limit polymerization. In Triton-lysed PMNs, 30% of gelsolin is bound to the Triton-soluble F-actin (TSF) pool and none is bound to the Triton-insoluble F-actin (TIF) pool. Calcium-activated PMNs exhibit concurrent temporal and quantitative TIF growth and TSF and total F-actin loss. To determine if gelsolin plays a role in regulating TSF pool size, we monitored gelsolin-actin interactions and TIF, TSF and G-actin content at 5 second intervals in PMNs activated with the calcium ionophore, ionomycin. Actin pools were measured by NBDphallacidin binding and by gel scans and expressed relative to basal; gelsolin-actin interactions were measured as change in the amount of EGTA-resistant gelsolin:actin (G:A) complexes and by immunoblot quantification of gelsolin in actin pools. In basal PMNs, 33% of PMN gelsolin is bound in 1:1 EGTA-resistant G:A complexes and TSF and TIF retain 30% and 0% of PMN gelsolin, respectively. By 20 seconds after ionomycin addition, TSF decreases, TIF increases and a fraction of gelsolin repartitions from the TSF to the TIF pool. At maximum change (60 seconds), total F-actin (TIF + TSF) and TSF decrease and TIF increases by 25%; gelsolin is bound to both TSF and TIF (35% of total gelsolin in each pool), and 1:1 EGTA-resistant G:A complexes increase from 33% to 70%. No changes occur in cells activated by ionomycin in the absence of Ca++. The data show Ca++ activated TIF growth and TSF loss are temporally and quantitatively associated with an increase in the percent of gelsolin bound to actin and the translocation of gelsolin from TSF to TIF. This is unique, since no other PMN activator is known to repartition gelsolin into TIF actin. Further, the Ca++ activated initial increase in TIF concurrent with a fall in TSF without a change in total F-actin or G-actin content suggest that TIF grows initially only by TSF annealing/cross-linking to TIF. Gelsolin may regulate these events. © 1995 Wiley-Liss, Inc.
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    URL: http://dx.doi.org/10.1002/cm.970300205
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    Comparative study of the colchicine binding site and the assembly of fish and mammalian microtubule proteins (1995)
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 30 (1995), S. 153-163 
    Details
    ISSN: 0886-1544
    Keywords: colchicine binding site ; MTC ; cod microtubules ; bovine microtubules ; MAPs ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Isolated microtubules from cod (Gadus morhua) are apparently more stable to colchicine than bovine microtubules. In order to further characterize this difference, the effect of the colchicine analogue 2-methoxy-5-(2,3,4-trimethoxyphenyl)-2,4,6-cyclo heptatrien-1-one (MTC) was studied on assembly, as measured by turbidity and sedimentation analysis, and on polymer morphology. MTC has the advantage to bind fast and reversible to the colchicine binding site of tubulin even at low temperatures. It was found to bind to one site in cod brain tubulin, with affinity (6.5 ± 1.5) × 105M 1at both low or high temperature, similarly to bovine brain tubulin. However, the effect of the binding differed. At substoichiometric concentrations of MTC bovine brain microtubule assembly was almost completely inhibited, while less effect was seen on the mass of polymerized cod microtubule proteins. A preformed bovine tubulin-colchicine complex inhibited the assembly of both cod and bovine microtubules at substoichiometric concentrations, but the effect on the assembly of cod microtubules was less. At higher concentrations (5 × 10-5 to 1 × 10-3M), MTC induced a large amount of cold-stable spirals of cod proteins, whereas abnormal polymers without any defined structure were formed from bovine proteins. Spirals of cod microtubule proteins were only formed in the presence of microtubule associated proteins (MAPs), indicating that the morphological effect of MTC can be modulated by MAPs. The effects of colchicine and MTC differed. At 10-5M colchicine no spirals were formed, while at 10-4M and 10-3M, a mixture of spirals and aggregates was found. The morphology of the spirals differed both from vinblastine spirals and from the spirals previously found when cod microtubule proteins polymerize in the presence of high Ca2concentrations. The present data show that even if the colchicine binding site is conserved between many different species, the bindings have different effects which seem to depend on intrinsic properties of the different tubulins. © 1995 Wiley-Liss, Inc.
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    Antibody against ahosphorylated proteins (MPM-2) recognizes mitotic microtubules in endosperm cells of higher plant haemanthus (1995)
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 31 (1995), S. 34-44 
    Details
    ISSN: 0886-1544
    Keywords: microtubule ; MTOC ; mitosis ; MPM-2 ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: In diverse cell types, monoclonal antibody MPM-2 recognizes a class of phosphorylated proteins related to microtubule organizing centers and abundant during mitosis. We have used this antibody in an attempt to identify the spatial and temporal localization of putative microtubule organizing centers in endosperm cells of the higher plant Haemanthus. Our results show that MPM-2 recognized epitope is present in interphase cells and enriched in mitotic cells. In interphase the antibody usually stains cytoplasmic granules. During the interphase-prophase transition immunoreactive material appears in the nucleus, at the nuclear envelope, and in association with microtubules. Concomitantly, we observed an increase of immunoreactivity of the cytoplasm. During mitosis the phosphorproteins recognized by MPM-2 are detected in the cytoplasm, in association with microtubules of the spindle, the phragmoplast, and in the newly-formed cell plate. After completion of mitosis, only the cell plate and cytoplasmic granules are MPM-2 positive. Extraction of the cells with Triton X-100 prior to fixation removes staining of the cytoplasm by MPM-2. The detergent resistant immunoreactive material remains associated with surrounding the nucleus microtubules of the prophase spindle, the core of kinetochore fibers, and the phragmoplast. In the phragmoplast, however, segments of microtubules which are distal to the cell plate are depleted of MPM-2.These data demonstrate that microtubule arrays of endosperm cells are phosphorylated during mitosis. Thus, similar to animal cells, interphase and mitotic microtubules of higher plants have different properties. Additionally, the localization of detergent resistant MPM-2 antigen points to the difference in microtubule nucleation/organization between higher plant and animal cells.
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  • 59
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    Flagellar quiescence response in sea urchin sperm induced by electric stimulation (1995)
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 31 (1995), S. 59-65 
    Details
    ISSN: 0886-1544
    Keywords: flagella ; cane-shaped bend ; principal bend ; calcium ; membrane depolarization ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: To investigate the mechanism of the flagellar quiescence in sperm, we examined the effect of electric stimulation of individual spermatozoa of the sea urchin, Hemicentrotus pulcherrimus. Stimulation with a suction electrode attached to the sperm head elicited a flagellar quiescence response, in which the sperm showed a typical cane-shaped bend in the proximal region of the flagellum when the electrode was used as anode. Cathodic stimulation also induced quiescence, but was much less effective than anodic stimulation. During the quiescence response, which lasted for 1-3 s, no new bend was initiated, and subsequently the flagellum resumed normal beating. The quiescence response required the presence of Ca2+ (〉2 mM) in sea water, and was inhibited by Co2+ and La3+. At low Ca2+ concentrations (2-5 mM), the angle of the cane-shaped bend was smaller than that at 10 mM Ca2+; thus the angle of the cane-shaped bend, characteristic of the quiescence response is dependent on Ca2+ concentration. These results suggest membrane, followed by an influx of Ca2+ into the flagellum through Ca2+ channels. The increase in Ca2+ concentration within the flagellum affects the amount of sliding and thus produces a cane-shaped proximal bend of various angles, white inhibiting both the propagation of the proximal bend (principal bend) and the formation of a new reverse bend.
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    URL: http://dx.doi.org/10.1002/cm.970310107
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  • 60
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    β-Tubulin mutation suppresses microtubule dynamics in vitro and slows mitosis in vivo (1995)
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 30 (1995), S. 285-300 
    Details
    ISSN: 0886-1544
    Keywords: microtubule dynamics ; β-tubulin ; mitosis ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Microtubule (MT) dynamics vary both spatially and temporally within cells and are thought to be important for proper MT cellular function. Because MT dynamics appear to be closely tied to the guanosine triphosphatase (GTPase) activity of β-tubulin subunits, we examined the importance of MT dynamics in the budding yeast S. cerevisiae by introducing a T107K point mutation into a region of the single β-tubulin gene, TUB2, known to affect the assembly-dependent GTPase activity of MTs in vitro. Analysis of MT dynamic behavior by video-enhanced differential interference contrast microscopy, revealed that T107K subunits slowed both the growth rates and catastrophic disassembly rates of individual MTs in vitro. In haploid cells tub2-T107K is lethal; but in tub2-T107K/tub2-590 heterozygotes the mutation is viable, dominant, and slows cell-cycle progression through mitosis, without causing wholesale disruption of cellular MTs. The correlation between the slower growing and shortening rates of MTs in vitro, and the slower mitosis in vivo suggests that MT dynamics are important in budding yeast and may regulate the rate of nuclear movement and segregation. The slower mitosis in mutant celis did not result in premature cytokinesis and cell death, further suggesting that cell-cycle control mechanisms “sense” the mitotic slowdown, possibly by monitoring MT dynamics directly. © 1995 Wiley-Liss, Inc.
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    A 62-kDA mitotic apparatus protein required for mitotic progression is sequestered to the interphase nucleus by associating with the chromosomes during anaphase (1995)
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 30 (1995), S. 310-323 
    Details
    ISSN: 0886-1544
    Keywords: mitosis ; mitotic apparatus ; sea urchin ; immunofluorescence ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: A protein component of 62-kDa (p62) in the mitotic apparatus of the sea urchin embryo has been shown to be important for the proper progression of mitosis [Dinsmore and Sloboda, 1989: Cell 57:127-134]. To study the subcellular distribution of p62 during the cell cycle of sea urchin embryos, indirect immunofluorescence microscopy was used coupled to a modified detergent extraction procedure. The improved fluorescent images obtained by this procedure provide new information concerning the subcellular localization of p62 during the cell cycle that could not be obtained with previous conventional staining procedures [Johnston and Sloboda, 1992: J. Cell Biol. 119:843-854]. Using affinity purified antibodies to p62, we observed a cell cycle-dependent localization of p62 to the chromosomes/chromatin. Prior to nuclear envelope breakdown of the first or second cell cycle, p62 localizes to chromatin in the nucleus. During mitosis, p62 associates with the region of the spindle occupied by the microtubules of the mitotic apparatus. As anaphase proceeds, but before the nuclear envelope reforms, p62 becomes progressively associated with the chromosomes. Thus, p62 is incorporated into the forming interphase nucleus due to its association with chromosomes during late anaphase, rather than by active translocation into the newly formed daughter nuclei through the nuclear pores. The protein is not unique to marine embryos, as demonstrated by immunofluorescence of Y-1 cells, a mouse adrenal tumor cell line In these cells, the localization of p62 is similar to the localization of the protein in echinoderm embryos, suggesting its possible function in mitotic progression in mammalian somatic cells as well. © 1995 Wiley-Liss, Inc.
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    Topographic compensation: Guidance and directed locomotion of fibroblasts on grooved micromachined substrata in the absence of microtubules (1995)
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 31 (1995), S. 45-58 
    Details
    ISSN: 0886-1544
    Keywords: colcemid ; kinesin ; actin ; topographic guidance ; micromachined substrata ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Fibroblats cultured on grooved substrata align themselves and migrate in the direction of the grooves, a phenomenon called contact guidance. Microtubules have been deemed important for cell polarization, directed locomotion, and contact guidance. Because microtubules were the first cytoskeletal element to align with the grooves when fibroblasts spread on grooved substrata, we investigated the consequences of eliminating the influence of microtubules by seeding fibro-blasts onto smooth and grooved micromachined substrata in the presence of colcemid. Fibroblasts were examined by time-lapse cinematography and epifluorescence or confocal microscopy to determine cell shape and orientation and the distribution of cytoskeletal or associated elements including actin filaments, vinculin, intermediate filaments, microtubules, and kinesin.As expected, cells spreading on smooth surfaces in the presence of colcemid did not polarize or locomote. Surprisingly however, by 24 hours, cells spread on grooves in the presence of colcemid were morphologically indistinguishable from controls spread on grooves. Both groups were aligned and polarized with the direction of the grooves and demonstrated directional locomotion along the grooves. In the absence of microtubules, kinesin localized to some of the aligned stress fibers and to leading edges of cells spreading on grooves. The grooved substratum compensated for the microtubule deficiency by organizing and maintaining an aligned actin filament framework. Thus, microtubules are not required to establish or maintain stable, polarized cell shapes or directed locomotion, provided an alternate oriented cytoskeletal component is available.
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    Identification of two new members of the tubulin family (1995)
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 31 (1995), S. 255-258 
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    ISSN: 0886-1544
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
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    Novel mode of hyper-oscillation in the paralyzed axoneme of a chlamydomonas mutant lacking the central-pair microtubules (1995)
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 31 (1995), S. 207-214 
    Details
    ISSN: 0886-1544
    Keywords: flagella ; Chlamydomonas ; mutant ; high-frequency vibration ; nanometer-scale measurement ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: The flageliar axoneme of the mutant pf18 lacking the central pair does not beat, but undergoes a nanometer-scale, high-frequency oscillation (hyper-oscillation) in the presence of ATP [Yagi et al., 1994: Cell Motil, Cytoskeleton 29:177-185]. The present study demonstrates that the amplitude of the hyper-oscillation increases significantly in the simultaneous presence of ATP and ADP. In addition, the hyper-oscillation under these conditions sometimes takes on an exceptionally simple asymmetric pattern, in which the maximal shearing velocity exceeds 50 μm/sec, much higher than the maximal velocity of ordinary dynein-microtubule sliding. The asymmetric oscillation thus appears to be at least partly driven by an internal elastic force. Its amplitude suggests that the axoneme has an elastic component that can be stretched by as long as 0.1 μm. Analyses of the asymmetric pattern further suggests that the axonemal dyneins have a tendency to attach to and detach from the doublets cooperatively and that the mechanochemical cycle of dynein has an inherent refractory period of about 2 msec, during which dynein cannot interact with microtubules.
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    In ascaris sperm pseudopods, msp fibers move proximally at a constant rate regardless of the forward rate of cellular translocation (1995)
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 31 (1995), S. 241-253 
    Details
    ISSN: 0886-1544
    Keywords: Ascaris sperm ; motility ; computer-assisted motion analysis ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Computer-assisted methods have been employed to obtain a high resolution description of pseudopod expansion, cellular translocation, and the subcellular dynamics of MSP fiber complexes in the motile sperm of the nematode Ascaris suum. Although Ascaris sperm translocating in a straight line or along a curved path do not retract their pseudopod or significantly alter pseudopod shape, they move in a cyclic fashion, with an average period between velocity peaks of 0.35 × 0.05 min, which is independent of the forward velocity of sperm translocation. Expansion is confined to a central zone at the distal edge of the pseudopod for sperm translocating in a straight line and to a left-handed or right-handed lateral zone in the direction of turning, for sperm translocating along a curved path. For cells translocating in a straight line, the branch points and kinks of MSP fiber complexes move in a retrograde direction in relation to the substratum at an average velocity of 11 μm per min which is independent of the forward velocity of sperm translocation. The distal (anterior) end of a fiber complex, however, moves distally at the speed of sperm translocation when it emanates from the expansion zone, but when it is displaced to a nonexpanding surface of the pseudopod, it stops moving distally. When a cell is anchored to the substratum and is, therefore, nonmotile, the velocity of fiber complexes moving in a retrograde direction doubles. The unique aspects of pseudopod and MSP fiber complex dynamics in Ascaris are compared to the dynamics of pseudopod formation and actin filament dynamics in traditional actin-based amoeboid cells, and the treadmill model for MSP polymerization is reassessed in light of the discovery that fiber complex branch points move proximally (posteriorly) at a fixed rate.
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    Molecular environment of ZO-1 in epithelial and non-epithelial cells (1995)
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 31 (1995), S. 323-332 
    Details
    ISSN: 0886-1544
    Keywords: adherens junction ; cytoskeleton ; intercellular junction ; tight junction ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: We previously reported the expression of ZO-1 in cell types that do not form tight junctions. Here we compare the molecular environments of ZO-1 in epithelial cells, primary cultures of astrocytes and in the non-epithelial S180 sarcoma cell line. ZO-1 co-localizes with a subset of actin filament in all cell types. In astrocytes, ZO-1 is found concentrated in discrete bands at points of cell-cell contact. Indirect immunofluorescent microscopy shows that these bands of ZO-1 co-localize with the adherens junction proteins vinculin and α-actinin, and with the antigen recognized by a pan-cadherin antibody. In contrast, ZO-1 in S180 cells, which exhibit limited cell-cell interactions, is diffusely distributed over the plasma membrane, with concentrations in lamellipodia where actin filaments accumulate. ZO-1 does not co-localize with vinculin at focal adhesions in this cell type. Analysis of ZO-1 immunoprecipitation profiles from different cell types, performed under conditions previously demonstrated to maintain interactions between ZO-1, ZO-2 and p130 from the MDCK epithelial cell line, show that the proteins which co-precipitate with ZO-1 vary with cell type. Precipitation of polypeptides at 165 kDa, potentially ZO-2, and 65 kDa occurs in both a mouse kidney tubule epithelial cell line and the non-epithelial S180 cells. No proteins specifically associate with ZO-1 immunoprecipitated from astrocytes. Spectrin, α-actinin, vinculin and cadherin are not detected in immunoblots of ZO-1 immunoprecipitates from any cell type. © 1995 Wiley-Liss, Inc.
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    Genomic structure of a cytoplasmic dynein heavy chain gene from the nematode Caenorhabditis elegans (1995)
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 32 (1995), S. 26-36 
    Details
    ISSN: 0886-1544
    Keywords: microtubules ; motor proteins ; axonal transport ; mitosis ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: We report the cloning and sequencing of genomic DNA encoding a cytoplasmic dynein heavy chain from the nematode Caenorhabditis elegans. In a contiguous stretch of 35,103 bp of DNA from the left arm of linkage group I, we have found a gene that is predicted to encode a protein of 4,568 amino acids. This gene is composed of 15 exons and 14 relatively short introns, and it has significant homology of the other dynein heavy chains in the databases. The deduced molecular mass of the derived polypeptide is 512,624 Da. As with other dynein heavy chains that have been sequenced to date, it contains four GXXGXGK(S/T) motifs that form part of the consensus sequence for nucleotide triphosphate-binding domains. Comparison of axonemal and cytoplasmic dynein heavy chains shows that regions of homology among all dyneins are clustered in the carboxyl terminal two-thirds of the polypeptide, whereas the amino terminal one-third of the heavy chains may contain domains that specify functions that differ between axonemal and cytoplasmic forms of the dynein heavy chain. © 1995 Wiley-Liss, Inc.
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    Masthead (1995)
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 32 (1995) 
    Details
    ISSN: 0886-1544
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
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    URL: http://dx.doi.org/10.1002/cm.970320401
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    Role of cilia in human health (1995)
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 32 (1995), S. 95-97 
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    ISSN: 0886-1544
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
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    Regulation of dynein-driven microtubule sliding by an axonemal kinase and phosphatase in Chlamydomonas flagella (1995)
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 32 (1995), S. 106-109 
    Details
    ISSN: 0886-1544
    Keywords: Chlamydomonas ; cilia and flagella ; protein kinase and phosphatase ; dynein-driven microtubule sliding ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: The following is a summary of physiological and pharmacological studies of the regulation of dynein-driven microtubule sliding in Chlamydomonas flagella. The experimental basis for the study is described, and data indicating that an axonemal cAMP-dependent protein kinase can regulate inner arm dynein activity are reviewed. In addition, preliminary data are summarized indicating that an axonemal type 1 phosphatase can also regulate dynein-drive microtubule sliding velocity. It is predicted that the protein kinase, phosphatase, and an inner dynein arm component form a regulatory complex in the axoneme.
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    Multi-Dynein hypothesis (1995)
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 32 (1995), S. 129-132 
    Details
    ISSN: 0886-1544
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
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    Recombinant expression of the brush border myosin I heavy chain (1995)
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 32 (1995), S. 151-161 
    Details
    ISSN: 0886-1544
    Keywords: membrane localization ; ATPase activity ; actin binding ; calmodulin ; motility ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Although the specific functions of myosin I motors are not known, their localization to membrane structures suggests a function in membrane motility. Different myosin I isoforms in the same cell or in different cells can possess different localizations. To determine if the localization and biochemical activity of the best-characterized mammalian myosin I, chicken intestinal epithelium brush border myosin I, was dependent on determinants of the membrane or actin cytoskeleton specific to epithelial cells, we transfected the cDNA for the heavy chain of this myosin into COS cells. Transient transfection of COS cells with the chicken brush border myosin I heavy chain resulted in the production of recombinant myosin I. Recombinant brush border myosin I localized to protrusions of the plasma membrane, particularly at spreading cell edges, and also to unknown cytoplasmic structures. Some cells expressing particularly high levels of brush border myosin I possessed a highly irregular surface. Recombinant brush border myosin I purified from COS cells bound to actin filaments in an ATP-dependent manner and decorated actin filaments to form a characteristic appearance. The recombinant myosin also catalyzed calcium-sensitive, actin-activated MgATPase activity similar to that of the native enzyme. Thus, any cellular factor required for the general membrane localization or biochemical activity of brush border myosin I is present in COS cells as well as intestinal epithelium.
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    Fascins, a family of actin bundling proteins (1995)
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 32 (1995), S. 1-9 
    Details
    ISSN: 0886-1544
    Keywords: review ; fascin ; actin ; actin bundling proteins ; filopodia ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Fascin is an actin-bundling protein that was first isolated from cytoplasmic extracts of sea urchin eggs [Kane, 1975: J. Cell Biol. 66:305-315] and was the first bundling protein to be charactrized in vitro. Subsequent work has shown that fascin bundles actin filaments in fertilized egg microvilli and filopodia of phagocytic coelomocytes [Otto et al., 1980: Cell Motil. 1:31-40; Otto and Bryan, 1981: Cell Motil. 1:179-192]. Fifteen years later, the molecular cloning of sea urchin fascin [Bryan et al., 1993: Proc. Natl. Acad. Sci. U.S.A. 90:9115-9119] has led to the identification and characterization of homologous proteins in Drosophila [Cant et al., 1994: J. Cell Biol. 125:369-380], Xenopus [Holthuis et al., 1994: Biochim. Biophys. Acta. 1219:184-188], rodents [Edwards et al., 1995: J. Biol. Chem. 270:10764-10770], and humans [Duh et al., 1994: DNA Cell Biol. 13:821-827; Mosialos et al., 1994: J. Virol. 68:7320-7328] that bundle actin filaments into structures which stabilize cellular processes ranging from mechanosensory bristles to the filopodia of nerve growth cones. Fascin has emerged from relative obscurity as an exotic invertebrate egg protein to being recognized as a widely expressed protein found in a broad spectrum of tissues and organisms. This purpose of this review is to relate the early studies done on sea urchin and HeLa cell fascins to the recent molecular biology that defines a family of bundling proteins, and discuss the current state of knowledge regarding fascin structure and function. © 1995 Wiley-Liss, Inc.
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    Centripetal transport of microtubules in motile cells (1995)
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 32 (1995), S. 173-186 
    Details
    ISSN: 0886-1544
    Keywords: microtubule dynamics ; microinjection ; centripetal transport ; pinocytotic vesicles ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: The Study of microtubule (MT) dynamics in cells has largely been restricted to events occurring over relatively short periods in nonmotile or stationary cell in culture. By using the antioxidant, Oxyrase, we have reduced the sensitivity of fluorescent MTs to photodamage and this has allowed us to image fluorescent MTs with good temporal resolution over much longer periods of time. We have used our enhanced imaging capabilities to examine MT dynamics in fibroblasts moving directionally into a wound. We found that MTs in these cells exhibited dynamic instability similar to that reported for other cells. More interestingly, we found a novel dynamic behavior of the MTs in wihch entire MTs were moved inward from the leading edge toward the cell nucleus. This centripetal transport (CT) of MTs only occurred to those MTs that were oriented with their long axis parallel to the leading edge; radially oriented MTs were not transported centripetally. Both small bundles of MTs and individual MTs were observed to undergo CT at a rate of 0.63 × 0.37 μm/min. This rate was similar to the rate of CT of latex beads applied to the cell surface and of endogenous pinocytotic vesicles in the cytoplasm. When we imaged both MTs and pinocytotic vesicles, we found that the pinocytotic vesicles were ensheathed by a small group of parallel MTs that moved centripetally in concert with the vesicles. Conversely, we found many instances of MTs moving centripetally without associated vesicles. When cells were treated with nocodazole to depolymerize MTs rapidly, the rate of pinocytotic vesicle CT was inhibited by 75%. This suggests that centripetal transport of MTs may be involved in the movement of pinocytotic vesicles in cells. In conclusion, our results show that MTs in motile cells are redistributed by a novel mechanism, CT, that does not require changes in polymer length. The centripetally transported MTs may play a role in transporting pinocytotic vesicles in the cell. © 1995 Wiley-Liss, Inc.
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    Over-expression of smooth muscle caldesmon in mouse fibroblasts (1995)
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 32 (1995), S. 233-243 
    Details
    ISSN: 0886-1544
    Keywords: caldesmon ; over-expression ; cell cycle ; motility ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Caldesmon is an actin, calmodulin, tropomyosin, and myosin binding protein implicated in the regulation of actomyosin interactions. We have invesigated the effect of overexpression of the higher molecular weight smooth muscle isoform of caldesmon on mouse L cell physiology. Mouse L(TK-) cell were transfected stably with plasmids carrying the TK+ gene and a full length human smooth muscle caldesmon cDNA under control of the adenovirus major late promoter. Two clones displaying four and eight times the level of the endogenous mouse high molecular weight caldesmon were isolated. These cells acquire a distinct phenotype characterized by an altered morphology, including an increased number of processes and larger area due to enhanced cell spreading, and a significantly slower growth rate than that of untransfected control cells, or cells transfected with the TK+ gene alone. The majority of the overexpressed caldesmon appears to be active and localized on cytoskeleton structures as determined by detergent lysis. Immuno-fluorescence analysis of the clones revealed that the caldesmon is localized as punctate staining on stress-fibers and in membrane ruffles. The immunofluores-cence images suggest that caldesmon overexpressing cells have more total filaments than control cells. The effects of excess caldesmon on cell mobility are ambiguous: one clone displayed increased motility compared to the control, while the motility of the second clone was decreased relative to the control. © 1995 Wiley-Liss, Inc.
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    Analysis of the interdependent localization of vimentin and microtubules in neoplastic myoepithelial cells (1995)
    New York, NY : Wiley-Blackwell
    Cell Motility and the Cytoskeleton 32 (1995), S. 289-298 
    Details
    ISSN: 0886-1544
    Keywords: cytoskeleton ; intermediate filaments ; vimentin ; microtubules ; myoepithelial cells ; immunofluorescence ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Salivary gland neoplastic myoepithelial cells in culture form very thin cytoplasmic processes in which the vimentin network is well dispersed. These vimentin filaments can be individually visualized by immunofluorescence. In this study, we have analyzed the role of microtubules in the distension and organization of the vimentin filament network found in these cells. We find that vimentin filaments colocalize along microtubules; however, a significant number of filaments can also be found in microtubule-free domains. Additionally, vimentin filaments are absent from large domains of microtubule inhibitor nocodazole did not cause any retraction of the distended vimentin network. This observation suggests that the structural integrity of microtubules is not important for the stability of the vimentin network. Combining procedures for transient disruption of vimentin filaments and microtubules we observed that, in the absence of microtubules, the vimentin network could reassemble in the perinuclear region but was unable to extend toward the cell periphery. The dispersion of vimentin filaments to the peripheral regions of the cytoplasm could only be observed upon microtubule reassembly. This indicates that microtubules are not required for the stability of the vimentin network, but the dispersion of vimentin filaments to the peripheral cytoplasm depends on active interactions with microtubules. © 1995 Wiley-Liss, Inc.
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    Expression of the reference value for proficiency tests (1995)
    New York, NY : Wiley-Blackwell
    Journal of Chemometrics 9 (1995), S. 197-209 
    Details
    ISSN: 0886-9383
    Keywords: proficiency test ; true value ; homogeneity robust statistic ; standard ; Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Profficiency tests raise two types of problems: (i) the homogeneity of a sample must be carefully checked before using it as a reference material; (ii) it is necessary to define a conventional reference value (RV) in order to rank participants. Since these topics are poorly addressed in the literature, a reference material was specially prepared in order to propose a procedure for verifying homogeneity and to establish whether the algorithms classically used to compute the conventional true value have an influence on the conclusion of the test.The homogeneity of the sample was not perfect and univariate and multivariate techniques were used to demonstrate some analytes can be suspected as heterogeneous. However, this was considered adequate for introducing the sample in a large proficiency test organized between four laboratory associations which regularly perform such tests. Altogether more than 3000 measurements were collected and eight algorithms were applied to compute the RV on 14 analytes. Thus is was possible to demonstrate that some of these algorithms are better adapted than others. It is also obvious that some analytes are better suited to proficiency testing.It can be concluded from this work that some effort towards standardization would be profitable to check homogeneity or to compute the RV, especially since the economic weight of proficiency testing is becoming even more important with the development of certification accreditation.
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    Masthead (1995)
    New York, NY : Wiley-Blackwell
    Journal of Chemometrics 9 (1995) 
    Details
    ISSN: 0886-9383
    Keywords: Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/cem.1180090601
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    Robust non-linear regression analysis (1995)
    New York, NY : Wiley-Blackwell
    Journal of Chemometrics 9 (1995), S. 451-457 
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    ISSN: 0886-9383
    Keywords: non-linear regression ; optimization ; robust methods ; Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Several robust regression methods, including a new proposal, are described and their properties discussed. Resistance to various types of outliers and non-normality is demonstrated. The techniques are applied to non-linear regression models from chemical kinetics and calibration. Optimization of the types of objective functions encountered when applying robust regression is considered.
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    Incorporating auxiliary predictor variation in principal component regression models (1995)
    New York, NY : Wiley-Blackwell
    Journal of Chemometrics 9 (1995), S. 471-481 
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    ISSN: 0886-9383
    Keywords: batch prediction ; continuum regression ; multivariate calibration ; sequential prediction ; simultaneous prediction ; Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In analytical chemistry a single fitted calibration model is used repeatedly to predict the level of the analyte of interest for the specimens comprising the prediction set. Unlike the calibration (or training) set, which is often limited in size, the prediction set can be very large.In the case of multivariate calibration a number of methods such as PLS and PCR are commonly used to construct the calibration model. The set of instrumental measurements and the reference analyte level are available for each specimen in the calibration set. For specimens in the prediction set, only the instrumental measurements are available, since the problem is to predict the analyte level for these specimens. It is not widely recognized that predictions of the analyte levels for individual specimens can be improved by utilizing seemingly unrelated information from the instrumental measurements associated with the other members of the prediction set. In the case of PCR there exists a very straightforward procedure for doing this. A description of the various sources of prediction errors is provided to explain the ability of PCR to utilize this additional information. The use of PCR in this context is illustrated with both a synthetic and a real example.
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    Multivariate analysis in practice: A training package, K. Esbensen, S. Schonkopf and T. Midtgaard, CAMO AIS: Trondheim, 1994,361 pp. ISBN 82-993330-0-8, $295.00. The text is bundled with the training version of the Unscrambler® multivariate analysis software for MS-DOS. Available from CAMO AIS, Olav Tryggvasons Gate 24, N-7011 Trondheim, Norway (Telephone: (+47) 7351 4966 Fax: (+47) 7351 4257) or from CAMO USA, 435 Blake Street, Menlo Park, CA 94025, U.S.A. (TelephoneFax: (+1415) 324-4286, Internet: teledyn@netcom.com) (1995)
    New York, NY : Wiley-Blackwell
    Journal of Chemometrics 9 (1995), S. 521-523 
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    ISSN: 0886-9383
    Keywords: Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/cem.1180090609
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    A correlation principal component regression analysis of NIR data (1995)
    New York, NY : Wiley-Blackwell
    Journal of Chemometrics 9 (1995), S. 21-29 
    Details
    ISSN: 0886-9383
    Keywords: Near-infrared absorbance ; Partial least squares ; Principal component regression ; Root-mean-square error of prediction ; Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The use of principal component regression (PCR) as a multivariate calibration method has been discussed by a number of authors. In most situations principal components are included in the regression model in sequence based on the variances of the components, and the principal components with small variances are rarely used in regression. As pointed out by some authors, a low variance for a component does not necessarily imply that the corresponding component is unimportant, especially when prediction is of primary interest. In this paper we investigate a different version of PCR, correlation principal component regression (CPCR). In CPCR the importance of principal components in terms of predicting the response variable is used as a basis for the inclusion of principal components in the regression model. Two typical examples arising from calibrating near-infrared (NIR) instruments are discussed for the comparison of the two different versions of PCR along with partial least squares (PLS), a commonly used regression approach in NIR analysis. In both examples the three methods show similar optimal prediction ability, but CPCR performs better than standard PCR and PLS in terms of the number of components needed to achieve the optimal prediction ability. Similar results are also seen in other NIR examples.
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    URL: http://dx.doi.org/10.1002/cem.1180090104
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    Announcement (1995)
    New York, NY : Wiley-Blackwell
    Journal of Chemometrics 9 (1995), S. i 
    Details
    ISSN: 0886-9383
    Keywords: Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/cem.1180090108
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    International chemometrics research meeting (ICRM) (1995)
    New York, NY : Wiley-Blackwell
    Journal of Chemometrics 9 (1995), S. 137-138 
    Details
    ISSN: 0886-9383
    Keywords: Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/cem.1180090205
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    Simple encoding of infrared spectra for pattern recognition. 1: Statistical examination of the effectiveness and information content by factor analysis (1995)
    New York, NY : Wiley-Blackwell
    Journal of Chemometrics 9 (1995), S. 143-168 
    Details
    ISSN: 0886-9383
    Keywords: pattern recognition ; infrared spectra ; factor analysis ; maximum likelihood method ; entropy of information ; Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The spectral region from 700 to 3600 cm-1 is subdivided into several wave number intervals. The peaks in each interval are summarized by means of three encoding algorithms. Using a factor model of kcommon factors, the total extractable variacnce (com) of a given set of intervals is calculated and correlated with the redundancy of information in all these intervals. The value of com is verified by analysis of the factor loadings aik (factor pattern). Finally, the information content of some chosen sets of intervals coded by the three selected feature algorithms will be correlated to the probability of information flow through a serial-parallel network. The encoding using only wave numbers was found to be the most effective.
    Additional Material: 9 Ill.
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    URL: http://dx.doi.org/10.1002/cem.1180090303
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    Diagnostics statistics in QSAR (1995)
    New York, NY : Wiley-Blackwell
    Journal of Chemometrics 9 (1995), S. 211-221 
    Details
    ISSN: 0886-9383
    Keywords: diagnostics statistics ; QSAR ; MASCA ; principal component regression ; non-least squares regression ; types of multicollincarity ; flagged observations ; influential points ; high-leverage points ; outliers ; extra-carrier points ; random perturbation ; cluster correalation ; resampling ; Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The formal application of a Hansch analysis to a series of 3-quinuclidinyl benzylates (QNBs) led to a ‘statistically significant’ QSAR equation. In contrast, the application of the MASCA model has shown that the design matrix is unsuitable for each QSAR analysis: one sample member is an outlier but not a high-leverage or influential point; another one is an influential point, a high-leverage point and an extra-carrier point. The regressors of the design matrix are multicollinear without predictive model power. The result of such flagged observation and this type of multicollinearity is a multiple cluster correlation. The QNB series is a good example for ‘sampling artifacts’ where no practically important but artificial QSARs can be found.
    Additional Material: 3 Ill.
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    URL: http://dx.doi.org/10.1002/cem.1180090307
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    Stone and jonathan versus mager debate (1995)
    New York, NY : Wiley-Blackwell
    Journal of Chemometrics 9 (1995), S. 230-231 
    Details
    ISSN: 0886-9383
    Keywords: Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/cem.1180090311
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    A review of robust process design approaches (1995)
    New York, NY : Wiley-Blackwell
    Journal of Chemometrics 9 (1995), S. 239-262 
    Details
    ISSN: 0886-9383
    Keywords: industrial experimentation ; parameter design ; quality by design ; robust design ; Taguchi method ; Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The aim of this paper is to present a simple structured review of the different approaches to robust process design to clarify their similarities and dissimilarities. It is primarily written for practitioners who wish to understand and compare the main ideas of each approach and to apply them to their work. Two examples are used to illustrate the different approaches and their corresponding data analysis strategies: the first one is a constructed example on a pigment kneading process and the second one is real example dealing with the validation of an HPLC method. A comparison of the different approaches is provided and some practical recommendations are formulated.
    Additional Material: 12 Ill.
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    URL: http://dx.doi.org/10.1002/cem.1180090402
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    PLS shrinks (1995)
    New York, NY : Wiley-Blackwell
    Journal of Chemometrics 9 (1995), S. 323-326 
    Details
    ISSN: 0886-9383
    Keywords: partial least squares ; biased regression ; ordinary least squares ; minimum length least squares ; Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: An algebraic proof is given that in partial least squares (PLS) regression the Euclidean length of the estimator is shrunk in comparison with the ordinary least squares estimator or with PLS estimators based on a larger number of dimensions.
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    URL: http://dx.doi.org/10.1002/cem.1180090406
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    Masthead (1995)
    New York, NY : Wiley-Blackwell
    Journal of Chemometrics 9 (1995) 
    Details
    ISSN: 0886-9383
    Keywords: Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/cem.1180090501
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    A simple iteration algorithm for PLS regression (1995)
    New York, NY : Wiley-Blackwell
    Journal of Chemometrics 9 (1995), S. 363-372 
    Details
    ISSN: 0886-9383
    Keywords: PLS regression ; orthogonal expansion ; optimization ; Lagrange multipliers ; Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A simple iteration algorithm that is faster and less memory-intensive than the NIPALS iteration algorithm for PLS regression is presented. The iteration algorithm is obtained by treating the orthogonal expansion or decomposition of a matrix X as an extremum problem subject to normalization and orthogonality constraint conditions and then solving the problem by use of the method of Lagrange multipliers. The main idea in this method is to find the transformation vector r. The latent variable t is expressed exactly as the linear combination of X-variables with the vector r so that the final regression coefficients can be conveniently provided. In the algorithm the recursion of the orthogonal projection is needed, which is derived by use of a matrix inverse formula. Algorithms are established from the equation for calculating the vector r that are suitable for dealing with three cases of large data sets. The first case is when the number of objects is very large, the number of variables is relatively small and the number of Y-variables is equal to or greater than the number of X-variables. The second case is when the number of objects is very large, the number of variables is relatively small and the number of X-variables is greater than the number of Y-variables. The last case is when the number of variables, either X- or Y-variables, or both, is very large and the number of objects is small.
    Additional Material: 4 Tab.
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    URL: http://dx.doi.org/10.1002/cem.1180090504
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    Algorithm for finding an interpretable simple neural network solution using PLS (1995)
    New York, NY : Wiley-Blackwell
    Journal of Chemometrics 9 (1995), S. 423-430 
    Details
    ISSN: 0886-9383
    Keywords: PLS ; neural network ; training ; interpretable ; Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: This communication describes the combination of a feedforward neural network (NN) with one hidden neuron and partial least squares (PLS) regression. Through training of the neural network with an algorithm that is a combination of a modified simplex, PLS and certain numerical restrictions, one gains an NN solution that has several feasible properties: (i) as in PLS the solution is qualitatively interpretable; (ii) it works faster than or comparably with ordinary training algorithms for neural networks; (iii) it contains the linear solution as a limiting case. Another very important aspect of this training algorithm is the fact that outlier detection as in ordinary PLS is possible through loadings, scores and residuals. The algorithm is used on a simple non-linear problem concerning fluorescence spectra of white sugar solutions.
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    URL: http://dx.doi.org/10.1002/cem.1180090508
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    Conference announcement (1995)
    New York, NY : Wiley-Blackwell
    Journal of Chemometrics 9 (1995), S. 439-439 
    Details
    ISSN: 0886-9383
    Keywords: Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/cem.1180090512
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    A PLS kernel algorithm for data sets with many variables and few objects. Part II: Cross-validation, missing data and examples (1995)
    New York, NY : Wiley-Blackwell
    Journal of Chemometrics 9 (1995), S. 459-470 
    Details
    ISSN: 0886-9383
    Keywords: PLS ; kernel algorithm ; multivariate calibration ; EM algorithm ; cross-validation ; missing data ; Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: This is Part II of a series concerning the PLS kernel algorithm for data sets with many variables and few objects. Here the issues of cross-validation and missing data are investigated. Both partial and full crossvalidation are evaluated in terms of predictive residuals and speed and are illustrated on real examples. Two related approaches to the solution of the missing data problem are presented. One is a full EM algorithm and the second a reduced EM algorithm which applies when the number of missing values is small. The two examples are multivariate calibration data sets. The first set consists of UV-visible data measured on mixtures of four metal ions. The second example consists of FT-IR measurements on mixtures consisting of four different organic substances.
    Additional Material: 5 Ill.
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    URL: http://dx.doi.org/10.1002/cem.1180090604
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    Orthogonal canonical variates for discrimination and classification (1995)
    New York, NY : Wiley-Blackwell
    Journal of Chemometrics 9 (1995), S. 509-520 
    Details
    ISSN: 0886-9383
    Keywords: canonical variates ; discriminant analysis ; partial least squares ; principal components ; Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A new set of derived variables is proposed for exhibiting group separation in multivariate data on for preprocessing such data prior to discriminant analysis. The technique combines optimal features of canonical variate analysis and principal component analysis: the derived variables are linear combinations of the original variables that optimize the canonical variate criterion (ratio of between-group to within-group variance) but subject to the orthogonality constraints of principal components. In this formulation the canonical variates can be derived even when the within-group matrix is singular (i.e. when there are more variables than objects in the data matrix). A simple computational algorithm for extraction of these variables is proposed. The methods are illustrated on several data sets and compared with alternative techniques such as principal component analysis and partial least squares.
    Additional Material: 7 Ill.
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    URL: http://dx.doi.org/10.1002/cem.1180090608
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    The Unscrambler®, Version 5.5. Multivariate analysis software for MS-DOS. Available from CAMO A/S, Olav Tryggvasons Gate 24, N-7011 Trondheim, Norway (Telephone: (+47) 7351 4966, Fax: (+47) 7351 4257) or from CAMO USA, 435 Blake Street, Menlo Park, CA 94025, U.S.A. (Telephone/Fax: (+1 415) 324-4286, Internet: teledyn@netcom.com). Single-copy price NOK 26 900 commercial, NOK 18 800 non-commercial, NOK 11 900 academic (1995)
    New York, NY : Wiley-Blackwell
    Journal of Chemometrics 9 (1995), S. 527-529 
    Details
    ISSN: 0886-9383
    Keywords: Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/cem.1180090612
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    Complex-radical terpolymerization of phenanthrene, maleic anhydride, and trans-stilbene (1995)
    Bognor Regis [u.a.] : Wiley-Blackwell
    Journal of Polymer Science Part A: Polymer Chemistry 33 (1995), S. 7-13 
    Details
    ISSN: 0887-624X
    Keywords: radical terpolymerization ; charge transfer complexes ; phenanthrene ; maleic anhydride ; trans-stilbene ; thermal stability ; Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The radical terpolymerization of the donor-acceptor-donor monomer system, phenanthrene (P) - maleic anhydride (M) - trans-stilbene (S), was studied. These monomers are known to be nonhomopolymerizable. The terpolymerization was carried out in p-dioxane and/or toluene at 70°C in the presence of benzoyl peroxide used as the initiator. P and S were found to form charge transfer complexes (CTC) with M in p-dioxane at 35°C. The results obtained are discussed in terms of the free monomer and complex propagation models. It is shown that terpolymerization is carried out at a stage close to binary copolymerization of two complexomers. The reactivity ratio of P … M and S … M complexes was estimated by the Kelen-Tüdös method. Absorbance ratios at 1770 cm-1 (vC=0 of anhydride group), 764 cm-1 (δCH in monosubstituted benzene of S), and 820 cm-1 (δCH in disubstituted benzene of P) as a function of terpolymer composition were established. P - M - S terpolymers are shown to have high thermal stabilities. © 1995 John Wiley & Sons, Inc.
    Additional Material: 8 Ill.
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    URL: http://dx.doi.org/10.1002/pola.1995.080330102
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    Electrical conductivity of poly(vinyl chloride) obtained by photodehydrochlorination from laminated poly(vinyl chloride)/polypyrrole films (1995)
    Bognor Regis [u.a.] : Wiley-Blackwell
    Journal of Polymer Science Part A: Polymer Chemistry 33 (1995), S. 1375-1380 
    Details
    ISSN: 0887-624X
    Keywords: poly(vinyl chloride) ; electrical conductivity ; photodehydrochlorination ; laminated films ; Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Poly(vinyl chloride) (PVC) has been converted to an electrically conductive structure by combined electrochemical and photochemical methods. PVC was cast on a polypyrrole (PPy) film electrode which had been electrochemically prepared. The PVC layer in the laminated PVC/PPy films was first dehydrochlorinated under the illumination of UV light, and the generated polyenes were subsequently doped with I2 and FeCl3. The maximum electrical conductivity achieved for such PVC film was 2.51 X 10-2 and 8.63 10-2 S cm-1 after I2 and FeCl3 doping, respectively. The temperature dependence of the electrical conductivity showed different behavior in higher and lower temperature ranges. In the former (T 〉 243 K), the T-1 law held, and the activation energy and bandgap were estimated as 0.25 and 0.49 eV, respectively. In the latter (T 〈 243 K), the conductivity mechanism followed the variable range hopping model (T-1/4 law) in which the radius of the localized state wave function and the density of the localized states at the Fermi level were 1.25 × 103 Å and 1.03 X 1015 eV-1 cm-3, respectively. © 1995 John Wiley & Sons, Inc.
    Additional Material: 8 Ill.
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    URL: http://dx.doi.org/10.1002/pola.1995.080330820
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    A novel way to study the initial stages of soap-free emulsion polymerizations: The intercalation of polystyrene oligomers into hydrotalcite (1995)
    Bognor Regis [u.a.] : Wiley-Blackwell
    Journal of Polymer Science Part A: Polymer Chemistry 33 (1995), S. 1409-1417 
    Details
    ISSN: 0887-624X
    Keywords: emulsion polymerization ; oligomers ; polystyrene ; hydrotalcite ; Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The dominant species in the early stages of an emulsifier-free emulsion polymerization of styrene has been found to be an oligomer of two to three monomer units using a novel trapping technique. This involved the intercalation of charged primary oligomers between the layers of a hydrotalcite, [Mg4Al2(OH)12]2+[A]2- (where A = dianion). Hydrotalcites are an important class of lamellar, inorganic compounds whose interlayer spacing can be mod-ified by anion exchange. Our approach first involved preparing a hydrotalcite precursor in which the layers were propped apart by an organic dianion (terephthalate = TA). This material was then used to capture the negatively charged polystyrene oligomers from the emulsion polymerization reaction mixture. We found that TA was rapidly ion-exchanged for the charged oligomers.The resulting pillared hydrotalcite material was characterized using XRD and SEC. We found that the interlayer spacing between the hydroxide layers increased to 23.2 Å on exposure to the emulsion reaction mixture. This represents an interlayer expansion of 18.3 Å (after subtraction of the hydroxide layer contribution), which is cnsistent with intercalation of oligomers with two to three monomer units arranged in a bilayer. This size estimate was confirmed by the results of size exclusion chromatography. © 1995 John Wiley & Sons, Inc.
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    Gamma-oxidation of linear low-density polyethylene: The dose-rate effect of irradiation on chemical and physical modifications (1995)
    Bognor Regis [u.a.] : Wiley-Blackwell
    Journal of Polymer Science Part A: Polymer Chemistry 33 (1995), S. 1455-1460 
    Details
    ISSN: 0887-624X
    Keywords: γ-oxidation ; polyethylene ; FTIR ; molecular weight ; elongation at break ; Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: γ-Oxidation of linear low-density polyethylene based on hexene and butene was investigated. Irradiation was performed at different dose rates in air (from 2 rad/s to 100 rad/s). Degraded samples were analyzed with IR combined with NO and SF4 derivatizations. Our results showed that the lower the dose rate, the higher the degree of oxidation in terms of γ-product formation. Ketone species appeared to be the dominant γ-products. The G values of γ-product formation were very dependent on the dose rate of initiation. Comparison of the G value ratio of different γ-products revealed stoechiometry differences. The complex appearance and disappearance of unsaturations was tentatively explained. The modifications of elongation at break induced by γ-irradiation were monitored by molecular changes in weight. This was not conclusive because changes in elongation at break are inconsistent with changes in Mw/Mn. © 1995 John Wiley & Sons, Inc.
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    URL: http://dx.doi.org/10.1002/pola.1995.080330906
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