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  • 04. Solid Earth::04.06. Seismology::04.06.06. Surveys, measurements, and monitoring
  • 05. General::05.09. Miscellaneous::05.09.99. General or miscellaneous
  • Bacteria
  • Wiley-Blackwell  (21)
  • Istituto Nazionale di Geofisica e Vulcanologia  (16)
  • American Chemical Society
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  • 1
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Gosselin, K. M., Nelson, R. K., Spivak, A. C., Sylva, S. P., Van Mooy, B. A. S., Aeppli, C., Sharpless, C. M., O’Neil, G. W., Arrington, E. C., Reddy, C. M., & Valentine, D. L. Production of two highly abundant 2-methyl-branched fatty acids by blooms of the globally significant marine cyanobacteria Trichodesmium erythraeum. ACS Omega, 6(35), (2021): 22803–22810, https://doi.org/10.1021/acsomega.1c03196.
    Description: The bloom-forming cyanobacteria Trichodesmium contribute up to 30% to the total fixed nitrogen in the global oceans and thereby drive substantial productivity. On an expedition in the Gulf of Mexico, we observed and sampled surface slicks, some of which included dense blooms of Trichodesmium erythraeum. These bloom samples contained abundant and atypical free fatty acids, identified here as 2-methyldecanoic acid and 2-methyldodecanoic acid. The high abundance and unusual branching pattern of these compounds suggest that they may play a specific role in this globally important organism.
    Description: This work was funded with grants from the National Science Foundation grants OCE-1333148, OCE-1333162, and OCE-1756254 and the Woods Hole Oceanographic Institution (IR&D). GCxGC analysis made possible by WHOI’s Investment in Science Fund.
    Keywords: Lipids ; Alkyls ; Bacteria ; Genetics ; Chromatography
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 2
    Publication Date: 2017-04-04
    Description: Seismological, geological and geodetic data have been integrated to characterize the seismogenic structure of the late 2013-early 2014 moderate energy (maximum local magnitude MLmax = 4.9) seismic sequence that struck the interior of the Matese Massif, part of the Southern Apennines active extensional belt. The sequence, heralded by a ML = 2.7 foreshock, was characterized by two main shocks with ML = 4.9 and ML = 4.2, respectively, which occurred at a depth of ∼17–18 km. The sequence was confined in the 10–20 km depth range, significantly deeper than the 1997–1998 sequence which occurred few km away on the northeastern side of the massif above ∼15 km depth. The depth distribution of the 2013–14 sequence is almost continuous, albeit a deeper (16–19 km) and a shallower (11–15 km) group of events can be distinguished, the former including the main shocks and the foreshock. The epicentral distribution formed a ∼10 km long NNW–SSE trending alignment, which almost parallels the surface trace of late Pliocene–Quaternary southwest-dipping normal faults with a poor evidence of current geological and geodetic deformation. We built an upper crustal model profile for the eastern Matese massif through integration of geological data, oil exploration well logs and seismic tomographic images. Projection of hypocentres on the profile suggests that the seismogenic volume falls mostly within the crystalline crust and subordinately within the Mesozoic sedimentary cover of Apulia, the underthrust foreland of the Southern Apennines fold and thrust belt. Geological data and the regional macroseismic field of the sequence suggest that the southwest-dipping nodal plane of the main shocks represents the rupture surface that we refer to here as the Matese fault. The major lithological discontinuity between crystalline and sedimentary rocks of Apulia likely confined upward the rupture extent of the Matese fault. Repeated coseismic failure represented by the deeper group of events in the sequence, activated in a passive fashion the overlying ∼11–15 km deep section of the upper crustal normal faults. We consider the southwest-dipping Matese fault representative of a poorly known type of seismogenic structures in the Southern Apennines, where extensional seismogenesis and geodetic strain accumulation occur more frequently on NE-dipping, shallower-rooted faults. This is the case of the Boiano Basin fault located on the northern side of the massif, to which the 1997–1998 sequence is related. The close proximity of the two types of seismogenic faults at the Matese Massif is related to the complex crustal architecture generated by the Pliocene–early Pleistocene contractional and transpressional tectonics.
    Description: Published
    Description: 823-837
    Description: 2T. Tettonica attiva
    Description: JCR Journal
    Description: partially_open
    Keywords: Seismicity and tectonics ; Continental tectonics: extensional ; Crustal structure ; 04. Solid Earth::04.04. Geology::04.04.01. Earthquake geology and paleoseismology ; 04. Solid Earth::04.04. Geology::04.04.09. Structural geology ; 04. Solid Earth::04.06. Seismology::04.06.06. Surveys, measurements, and monitoring
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 3
    Publication Date: 2017-04-04
    Description: Mt. Vesuvius (southern Italy) is one of the most hazardous volcanoes in the world. Its activity is currently characterized by moderate seismicity, with hypocenters located beneath the crater zone with depth rarely exceeding 5 km and magnitudes generally less than 3. The current configu- ration of the seismic monitoring network of Mt. Vesuvius consists of 18 seismic stations and 7 infrasound microphones. During the period 2006- 2010 a seismic array with 48 channels was also operative. The station distribution provides appropriate coverage of the area around the volcanic edifice. The current development of the network and its geometry, under conditions of low seismic noise, allows locating seismic events with M〈1. Remote instruments continuously transmit data to the main acquisition center in Naples. Data transmission is realized using different technological solutions based on UHF, Wi-Fi radio links, and TCP/IP client-server applications. Data are collected in the monitoring center of the Osservatorio Vesuviano (Italian National Institute of Geophysics and Volcanology, Naples section), which is equipped with systems for displaying and analyzing signals, using both real-time automatic and manual procedures. 24-hour surveillance allows to immediately communicate any significant anomaly to the Civil Protection authorities.
    Description: Published
    Description: S0450
    Description: 5V. Sorveglianza vulcanica ed emergenze
    Description: 1IT. Reti di monitoraggio e Osservazioni
    Description: JCR Journal
    Description: open
    Keywords: Vesuvius ; seismic network ; volcano monitoring ; network performance ; 04. Solid Earth::04.06. Seismology::04.06.06. Surveys, measurements, and monitoring ; 04. Solid Earth::04.08. Volcanology::04.08.06. Volcano monitoring ; 04. Solid Earth::04.08. Volcanology::04.08.07. Instruments and techniques
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 4
    Publication Date: 2017-04-04
    Description: Until a decade ago, regression analyses for conversions between different types of magnitude were using only the ordinary least squares method,which assumes that the independent variable is error free, or the simple orthogonal regression method,which assumes equal uncertainties for the two variables. The recent literature became aware of the inadequacy of such approaches and proposes the use of general orthogonal regression methods that account for different uncertainties of the two regression variables. Under the common assumption that only the variance ratio η between the dependent and independent variables is known, we compared three of such general orthogonal regression methods that have been applied to magnitude conversions: the chi-square regression, the general orthogonal regression, and the weighted total least squares. Although their formulations might appear quite different, we show that, under appropriate conditions, they all compute almost exactly the same regression coefficients and very similar (albeit slightly different) formal uncertainties. The latter are in most cases smaller than those estimated by bootstrap simulation but the amount of the deviation depends on the data set and on the assumed variance ratio.
    Description: European Union project SHARE (Seismic Hazard Harmonization in Europe) within the ambit of Task 3.1‘European Earthquake Database’.
    Description: Published
    Description: 1135-1151
    Description: JCR Journal
    Description: restricted
    Keywords: Earthquake source observations; Statistical seismology ; 04. Solid Earth::04.06. Seismology::04.06.06. Surveys, measurements, and monitoring
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 5
    Publication Date: 2017-04-04
    Description: In 2012 two seismic surveys were carried out in the area of Bagnolifutura (Campi Flegrei, Naples), with the aim of characterizing the properties of the seismic noise during the drilling activity performed in the framework of the Campi Flegrei Deep Drilling Project (CFDDP; https://sites.google.com/site/cfddpproject/). During the first survey, which was conducted from 2 to 4 April, before the drilling, seven broadband three-component seismometers were installed in two different array configurations. The second survey started on November 26, in concomitance with the drilling operations and fluid injection, and ended on December 5, four days after the end of the drilling, when the maximum depth of 502 m was reached. During this period seven broadband and one short-period three-component sensors were installed. A preliminary spectral analysis was performed on samples of seismic noise; moreover the root mean square of the amplitude of the signals and the polarization parameters were calculated. The preliminary results show similar spectral and polarization features for the data of the two surveys, whereas the amplitude of the seismic noise collected during the second survey is greatly influenced by the bad meteorological conditions. As future development experimental site transfer functions from Nakamura’s technique and surface wave dispersion from array techniques will be calculated to obtain the shallow crustal structure. The results corresponding to the different phases of the drilling activity will be compared, with the aim of establishing if significant variations of the medium properties have occurred during the experiment. Moreover the recorded signals will be deeply investigated in order to detect the eventual occurrence of microseismicity induced by fluid injection and to define its features.
    Description: Published
    Description: 1-18
    Description: N/A or not JCR
    Description: open
    Keywords: Campi Flegrei ; seismic noise ; array techniques ; 04. Solid Earth::04.06. Seismology::04.06.06. Surveys, measurements, and monitoring
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 6
    Publication Date: 2017-04-04
    Description: In the 1980's, from an analysis of satellite images, Russian scientists reported on a short-term thermal infrared radiation enhancement that occurred before some medium-to-large earthquakes in central Asia [Gorny et al. 1988]. Since then, many researchers have been studying earthquake thermal anomalies with satellite remote sensing data [Qiang et al. 1991, Tronin 1996, Tramutoli et al. 2001, Ouzounov and Freund 2004, Saraf and Choudhury 2004, Aliano et al. 2008, Blackett et al. 2011]. Recently, abnormal surface latent heat flux [Dey and Singh 2003, Cervone et al. 2005, Qin et al. 2009, Qin et al. 2011, Qin et al. 2012], outgoing long-wave radiation [Ouzounov et al. 2007] and microwave radiation [Takashi and Tadashi 2010] have also been shown to precede earthquakes. To investigate the possible physical mechanisms of such satellite thermal anomalies, some studies conducted a series of detecting experiments on rock loaded to fracturing [Wu et al. 2000, Freund 2002, Wu et al. 2002, Wu et al. 2006a, Wu et al. 2006b, Freund et al. 2007], and some hypotheses have been proposed. These have included: leaking of pore-gas, and hence the resulting greenhouse effect [Qiang et al. 1995]; activating and recombining of p-holes during rock deformation [Freund 2002]; release of latent heat due to near-surface air ionization [Pulinets et al. 2006], and stress-induced thermal effects due to friction and fluids [Wu and Liu 2009]. According to the Istituto Nazionale di Geofisica e Vulcanologia (INGV; National Institute of Geophysics and Volcanology), two major earthquakes with almost the same large magnitudes struck northern Italy, on the Po Plain in the Emilia Region. The first hit on May 20, 2012, at 02:03 UTC, with ML 5.9 (44.89 °N, 11.23 °E; 6 km in depth), and the second on May 29, 2012, at 07:00 UTC, with ML 5.8 (44.85 °N, 11.09 °E; 10 km in depth). These caused a total of 27 deaths and widespread damage. In this study, the long-term temperature data from both satellite and ground (with greater emphasis on the satellite data) have been used to determine whether there were thermal anomalies associated with this Emilia 2012 seismic sequence. In particular, the next section will be dedicated to describing both the data and the method of analysis. In Section 3, we provide the more significant results, which we discuss in Section 4, together with the main conclusions. We acknowledge that this work cannot be exhaustive, as it will require more data and analyses. However, although further studies will be welcome, we are confident that we have done the best with the data at our disposal.
    Description: Published
    Description: 823-828
    Description: 1.10. TTC - Telerilevamento
    Description: 3.1. Fisica dei terremoti
    Description: JCR Journal
    Description: open
    Keywords: earthquake event ; numerical method ; surface temperature ; Emilia-Romagna, Italy ; Emilia ; 04. Solid Earth::04.02. Exploration geophysics::04.02.05. Downhole, radioactivity, remote sensing, and other methods ; 04. Solid Earth::04.06. Seismology::04.06.01. Earthquake faults: properties and evolution ; 04. Solid Earth::04.06. Seismology::04.06.03. Earthquake source and dynamics ; 04. Solid Earth::04.06. Seismology::04.06.06. Surveys, measurements, and monitoring
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 7
    Publication Date: 2021-03-01
    Description: On September 6, 2002, at 01:21 GMT, the western part of the Tyrrhenian coast of Sicily was hit by an earthquake of magnitude ML = 5.6, representing the mainshock of a seismic sequence of roughly 500 earthquakes recorded in about one month. The event, although characterized by a moderate magnitude and located some forty kilometres offshore, produced relevant macroseismic effects in the Palermo area. A macroseismic survey was carried out soon after the earthquake with the aim of defining, for Civil Protection purposes, the damage scenario over a territory which is densely urbanised. In all, 134 localities were investigated. Damage generally depended on the high vulnerability of the buildings both for problems related to the old age - as is the case of the Palermo historical centre - and for peculiar unfavourable conditions due to site effects, particularly in some quarters of the city and in the nearby locality of Ficarazzi. Damage to masonry consisted of falling plaster, failure of corner walls, diagonal cracks in walls and widening of previous fissures. Some degraded buildings, almost abandoned and with evident lack of maintenance, suffered partial structural failure of roofs and floors. As regards reinforced concrete (RC) frame buildings, several edifices with 5-10 storeys suffered cracks in partitions and infill walls, sometimes with failure of these elements, and falling plaster. Fine cracks in beams of frames have also been observed, but without determining significant structural problems. In general, damage affects the lowest storeys of the RC frame buildings. According to the European Macroseismic Scale 1998, the maximum value of intensity, 6, was assigned to Palermo and Ficarazzi. The earthquake has also provoked effects on natural surroundings. Two types of phenomena have been detected: (i) hydrological effects and (ii) slope instability processes. The most relevant was the landslide which occurred near the village of Cerda, 60 km from the epicentre.
    Description: Published
    Description: 1-15
    Description: 1.11. TTC - Osservazioni e monitoraggio macrosismico del territorio nazionale
    Description: N/A or not JCR
    Description: open
    Keywords: Palermo ; terremoto 2002 ; macrosismica ; 04. Solid Earth::04.06. Seismology::04.06.06. Surveys, measurements, and monitoring
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 8
    Publication Date: 2021-03-01
    Description: Il presente lavoro è costituito dalla raccolta sistematica delle indagini macrosismiche eseguite in occasione dei terremoti di maggior rilievo verificatisi in Sicilia orientale e Calabria meridionale dal Gennaio 1999 al Gennaio 2001. I rilievi precedenti al Settembre 1999 sono stati effettuati nell’ambito delle attività del Gruppo Nazionale per la Difesa dai Terremoti, svolte presso l’Istituto Internazionale di Vulcanologia – CNR di Catania. Successivamente a tale data le indagini macrosismiche hanno costituito parte integrante delle attività di monitoraggio del Sistema Poseidon. Entrambi gli enti adesso costituiscono la sezione di Catania dell’Istituto Nazionale di Geofisica e Vulcanologia.
    Description: Published
    Description: 1-59
    Description: 1.11. TTC - Osservazioni e monitoraggio macrosismico del territorio nazionale
    Description: N/A or not JCR
    Description: open
    Keywords: Sicilia ; terremoti ; macrosismica ; 04. Solid Earth::04.06. Seismology::04.06.06. Surveys, measurements, and monitoring
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 9
    Publication Date: 2017-04-04
    Description: After the 1976 Friuli earthquake (Ms = 6.5) in north-eastern Italy that caused about 1,000 casualties and widespread destruction in the Friuli area, the Italian government established the Centro di Ricerche Sismologiche (CRS). This is now a department of the Istituto Nazionale di Oceanografia e di Geofisica Sperimentale (OGS), and it is specifically devoted to the monitoring of the seismicity of north-eastern Italy. Since its inception, the North-East Italy Seismic Network has grown enormously. Currently, it consists of 14 broad-band and 20 short-period seismic stations, all of which are telemetered to and acquired in real time at the OGS-CRS data center in Udine. Data exchange agreements in place with other Italian, Slovenian, Austrian and Swiss seismological institutes lead to a total number of 94 seismic stations acquired in real time, which confirms that the OGS is the reference institute for seismic monitoring of north-eastern Italy. Since 2002, CRS has been using the Antelope software suite as the main tool for collecting, analyzing, archiving and exchanging seismic data. SeisComP is also used as a real-time data exchange server tool. A customized web accessible server is used to manually relocate earthquakes, and automatic procedures have been set-up for moment-tensor determination, shaking-map computation, web publishing of earthquake parametric data, waveform drumplots, state-of-health parameters, and quality checks of the station by spectra analysis. Scripts for email/SMS/fax alerting to public institutions have also been customized. Recently, a real-time seismology website was designed and set-up (http://rts.crs.inogs.it/).
    Description: Istituto Nazionale di Geofisica e Vulcanologia
    Description: Published
    Description: 67-75
    Description: 1.1. TTC - Monitoraggio sismico del territorio nazionale
    Description: JCR Journal
    Description: open
    Keywords: Seismological Research Center ; OGS ; acquiring seismic data ; archiving seismic data ; analyzing seismic data ; exchanging seismic data ; real time ; 04. Solid Earth::04.06. Seismology::04.06.06. Surveys, measurements, and monitoring
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 10
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    Istituto Nazionale di Geofisica e Vulcanologia
    Publication Date: 2017-04-04
    Description: This is the first volume of an international scientific journal that is dedicated to issues of geoethics and geological culture. Its goal is to inform the Italian and international scientific communities about what emerged at the GeoItalia 2011 conference, attended by not only Italian geoscientists. At this conference, the geoscientists questioned their role in society and the responsibilities that they have to assume as scholars of the planet Earth and experts of the territory. They highlighted the need for rediscovery of the cultural values of geology as a science that can contribute to the construction of correct social knowledge, and the need to be aware that geoethics cannot exist without a real awareness among geoscientists of the cultural value of the Earth sciences.
    Description: Published
    Description: 331
    Description: 5.9. Formazione e informazione
    Description: JCR Journal
    Description: open
    Keywords: Geoethics ; Geoetica ; Geological Culture ; Earth Sciences ; Philosophy ; Education ; 05. General::05.03. Educational, History of Science, Public Issues::05.03.99. General or miscellaneous ; 05. General::05.09. Miscellaneous::05.09.99. General or miscellaneous
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 11
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    Istituto Nazionale di Geofisica e Vulcanologia
    Publication Date: 2017-04-04
    Description: Prof. Giulio Giorello is amongst the most prominent philosophers of science in Italy and in the world. He is currently Professor of the Philosophy of Science at the University of Milan, Director of the Series ‘Science and Ideas’ (Raffaele Cortina Books Editor), and Literary Journalist of the cultural pages of the Corriere della Sera, one of the most important of the Italian newspapers. In this keynote presentation, in interview form, he talks about the value that the Earth sciences have had through history, framing this group of disciplines in ethical and epistemological terms, and highlighting some important elements that have to be considered in geological activities.
    Description: Published
    Description: 343-346
    Description: 5.9. Formazione e informazione
    Description: JCR Journal
    Description: open
    Keywords: Geoethics ; Geological Culture ; Geoetica ; Giulio Giorello ; Earth Sciences ; Interview ; Philosophy ; Epistemology ; 05. General::05.03. Educational, History of Science, Public Issues::05.03.99. General or miscellaneous ; 05. General::05.09. Miscellaneous::05.09.99. General or miscellaneous
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 12
    Publication Date: 2020-02-24
    Description: After an earthquake, rapid, real-time assessment of hazards such as ground shaking and tsunami potential is important for early warning and emergency response. Tsunami potential depends on seafloor displacement, which is related to the length, L, width, W, mean slip, D, and depth, z, of earthquake rupture. Currently, the primary discriminant for tsunami potential is the centroid-moment tensor magnitude, MCMT, representing the seismic potency LWD, and w estimated through an indirect, inversion procedure. The obtained MCMT and the implied LWD w value vary with the depth of faulting, assumed earth model and other factors, and is only available 30 min or more after an earthquake. The use of more direct procedures for hazard assessment, when available, could avoid these problems and aid in effective early warning. Here we present a direct procedure for rapid assessment of earthquake tsunami potential using two, simple measures on P-wave seismograms—the dominant period on the velocity records, Td, and the likelihood that the high-frequency, apparent rupture-duration, T0, exceeds 50–55 s. T0 can be related to the critical parameters L and z, while Td may be related to W, D or z. For a set of recent, large earthquakes, we show that the period-duration product T T gives more information on tsunami impact and size than MCMT and other currently used d0w discriminants. All discriminants have difficulty in assessing the tsunami potential for oceanic strike-slip and backarc or upper plate, intraplate earthquake types. Our analysis and results suggest that tsunami potential is not directly related to the potency LWD from the ‘seismic’ faulting model, as is assumed with the use of the MCMT discriminant. Instead, knowledge of w rupture length, L, and depth, z, alone can constrain well the tsunami potential of an earthquake, with explicit determination of fault width, W, and slip, D, being of secondary importance. With available real-time seismogram data, rapid calculation of the direct, period-duration discriminant can be completed within 6–10 min after an earthquake occurs and thus can aid in effective and reliable tsunami early warning.
    Description: Published
    Description: 283-291
    Description: JCR Journal
    Description: restricted
    Keywords: earthquake dynamics ; earthquake source observation ; 04. Solid Earth::04.06. Seismology::04.06.06. Surveys, measurements, and monitoring
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 13
    Publication Date: 2017-04-04
    Description: Paper introducing and describing the EGU2010 SM1.3 session, "Seismic Centers Data Acquisition" (http://meetingorganizer.copernicus.org/EGU2010/session/2427)
    Description: Session «SM1.3 – Seismic Centers Data Acquisition» at the General Assembly 2010 of the European Geosciences Union (EGU), taking place in Vienna (Austria) between 2–7 May 2010, was organized to present both differences and similarities in operations by different types of seismic data centers in order to share experiences and stimulate constructive discussions. Only a few, widely used, "all-in-one" data acquisition and processing packages are available for seismic data centers, two public domain tools (SeisComP and EarthWorm) and one commercial tool (Antelope). The choice for any particular tool may depend on many different criteria, from operational aspects to scientific results, or on the availability of specific requirements in relation to a specific mission. The development of EarthWorm originally started in 1993 in the USA to replace aging and vendor tied regional processing systems. Antelope, on the other hand, started around 1996 with the aim to have real-time data flow from the field sensors to the scientist. SeisComP also started in the nineties as real-time data acquisition and processing system and evolved initially towards an early warning system for seismic observatories. Protocols have been established to exchange real-time waveform data between the different packages.
    Description: Istituto Nazionale di Geofisica e Vulcanologia
    Description: Published
    Description: 1-7
    Description: 1.1. TTC - Monitoraggio sismico del territorio nazionale
    Description: JCR Journal
    Description: open
    Keywords: EGU2010 ; Seismic Centers ; Data Acquisition ; Antelope ; SeisComP ; EarthWorm ; 04. Solid Earth::04.06. Seismology::04.06.06. Surveys, measurements, and monitoring
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 14
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    Istituto Nazionale di Geofisica e Vulcanologia
    Publication Date: 2017-04-04
    Description: The international debate in the field of geoethics focuses on some of the most important environmental emergencies, while highlighting the great responsibilities of geoscientists, whatever field they work in, and the important social, cultural and economic repercussions that their choices can have on society. The GeoItalia 2009 and 2011 conferences that were held in Rimini and Turin, respectively, and were organized by the Italian Federation of Earth Science, were two important moments for the promotion of geoethics in Italy. They were devoted to the highlighting of how, and with what tools and contents, can the geosciences contribute to the cultural renewal of society. They also covered the active roles of geoscientists in the dissemination of scientific information, contributing in this way to the correct construction of social knowledge. Geology is culture, and as such it can help to dispel misconceptions and cultural stereotypes that concern natural phenomena, disasters, resources, and land management. Geological culture consists of methods, goals, values, history, ways of thinking about nature, and specific sensitivity for approaching problems and their solutions. So geology has to fix referenced values, as indispensable prerequisites for geoethics. Together, geological culture and geoethics can strengthen the bond that joins people to their territory, and can help to find solutions and answers to some important challenges in the coming years regarding natural risks, resources, and climate change. Starting from these considerations, we stress the importance of establishing an ethical criterion for Earth scientists, to focus attention on the issue of the responsibility of geoscientists, and the need to more clearly define their scientific identity and the value of their specificities.
    Description: Published
    Description: 335-341
    Description: 5.9. Formazione e informazione
    Description: JCR Journal
    Description: open
    Keywords: Geoethics ; Education ; History of science ; Public issues ; General (Philosophy of Earth sciences) ; 04. Solid Earth::04.04. Geology::04.04.99. General or miscellaneous ; 05. General::05.03. Educational, History of Science, Public Issues::05.03.99. General or miscellaneous ; 05. General::05.09. Miscellaneous::05.09.99. General or miscellaneous
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 15
    Publication Date: 2017-04-04
    Description: A seguito dei tre eventi sismici di magnitudo ≥ 4.0, che tra il 10 e il 12 gennaio 2010 hanno colpito la zona del Fermano-Maceratese (Italia centrale), sono state installate due stazioni della rete sismica temporanea dell’INGV ad integrazione delle reti permanenti, nazionale e regionale, già presenti nell’area.
Questa zona ha una sismicità particolare confinata in uno strato sismogenetico fragile ad una profondità compresa tra 15 e 25 km meritevole di un’analisi dettagliata. Le stazioni sono state collegate in tempo reale al centro di acquisizione della Rete Sismica Nazionale dell’INGV utilizzando dei router UMTS. Questa soluzione si è rivelata estremamente rapida e conveniente. Solo una delle stazioni ha infatti risentito della debolezza del segnale UMTS, ma in generale i dati raccolti hanno contribuito a migliorare le localizzazioni ipocentrali prodotte in tempo reale presso la sala di sorveglianza sismica di Roma. L’integrazione dei dati acquisiti dalle stazioni temporanee ai dati prodotti dalle reti permanenti, ha fornito un dataset di buona qualità già rielaborato per degli studi di dettaglio dell’area.
    Description: Published
    Description: 1-30
    Description: 1.1. TTC - Monitoraggio sismico del territorio nazionale
    Description: N/A or not JCR
    Description: open
    Keywords: Emergency ; Seismic Monitoring ; 04. Solid Earth::04.06. Seismology::04.06.06. Surveys, measurements, and monitoring ; 04. Solid Earth::04.06. Seismology::04.06.10. Instruments and techniques
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 16
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    Istituto Nazionale di Geofisica e Vulcanologia
    Publication Date: 2017-04-04
    Description: Franco Ferrarotti, Professor emeritus at ‘La Sapienza’ University of Rome; since winning the first Chair in this discipline in Italy in 1961, he has been considered the Father of Italian Sociology. An independent Member of Italian Parliament in the third government (1958-1963), a member of the New York Academy of Sciences, and a ‘visiting Professor’ at many universities in Europe, North America, Russia, Japan and Latin America. Franco Ferrarotti has taught and still teaches in Europe and America, and he has received many awards throughout his career. In this interview, he talks about the social aspects and consequences of Earth sciences studies.
    Description: Published
    Description: 347-348
    Description: 5.9. Formazione e informazione
    Description: JCR Journal
    Description: open
    Keywords: Geoethics ; Geological Culture ; Geoetica ; Social aspects ; Geologists activity ; Scientific information ; Society ; 05. General::05.03. Educational, History of Science, Public Issues::05.03.99. General or miscellaneous ; 05. General::05.09. Miscellaneous::05.09.99. General or miscellaneous
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  • 17
    Publication Date: 2017-04-03
    Description: Computing the magnitude of an earthquake requires correcting for the propagation effects from the source to the receivers. This is often accomplished by performing numerical simulations using a suitable Earth model. In this work, the energy magnitude Me is considered and its determination is performed using theoretical spectral amplitude decay functions over teleseismic distances based on the global Earth model AK135Q. Since the high frequency part (above the corner frequency) of the source spectrum has to be considered in computing Me, the influence of propagation and site effects may not be negligible and they could bias the single station Me estimations. Therefore, in this study we assess the inter- and intrastation distributions of errors by considering the Me residuals computed for a large data set of earthquakes recorded at teleseismic distances by seismic stations deployed worldwide. To separate the inter- and intrastation contribution of errors, we apply a maximum likelihood approach to the Me residuals. We show that the interstation errors (describing a sort of site effect for a station) are within ±0.2 magnitude units for most stations and their spatial distribution reflects the expected lateral variation affecting the velocity and attenuation of the Earth's structure in the uppermost layers, not accounted for by the 1-D AK135Q model. The variance of the intrastation error distribution (describing the record-to-record component of variability) is larger than the interstation one (0.240 against 0.159), and the spatial distribution of the errors is not random but shows specific patterns depending on the source-to-station paths. The set of coefficients empirically determined may be used in the future to account for the heterogeneities of the real Earth not considered in the theoretical calculations of the spectral amplitude decay functions used to correct the recorded data for propagation effects.
    Description: Published
    Description: 1444-1454
    Description: JCR Journal
    Description: restricted
    Keywords: time series analysis ; 04. Solid Earth::04.06. Seismology::04.06.06. Surveys, measurements, and monitoring
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  • 18
    facet.materialart.
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    Istituto Nazionale di Geofisica e Vulcanologia
    Publication Date: 2017-04-04
    Description: We argue here that the introduction of an ethical code of conduct that follows the example of the Hippocratic Oath of physicians will help geologists to acquire binding awareness of their professional and social responsibilities. The ethical behavior and obligations of modern geologists involve, but are not limited to, the following issues: correct land/ environment use and management; respect of truth and science; and protection of the Earth systems, on both the local and global scales, and therefore, of our well-being. We believe that for geoligists, the explicit acceptance of an ethical code will help to promote: (i) an awareness of their social role, expertise and sense of belonging to a professional community; (ii) an understanding of the expectations of citizens and society; and (iii) cultural growth, with better use of research and implementation of scientific and professional skills. All this should enhance the public recognition of the social mission of geologists, which is essential for the well-being of society. Therefore, we suggest that like in the majority of medical schools, ethical training should be a part of the university curriculum for students in geology.
    Description: Published
    Description: 365-369
    Description: 5.9. Formazione e informazione
    Description: JCR Journal
    Description: open
    Keywords: Geoethics ; Geological Culture ; Geoetica ; Hippocratic Oath ; Geologists ; Social responsibility ; 05. General::05.03. Educational, History of Science, Public Issues::05.03.99. General or miscellaneous ; 05. General::05.09. Miscellaneous::05.09.99. General or miscellaneous
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  • 19
    Publication Date: 2017-04-04
    Description: The 2009 April 6, Mw= 6.3 L’Aquila earthquake occurred within a complex system of NW–SE trending normal faults in the Abruzzi Central Apennines (Italy). We analyse the coseismic deformation as measured by 〉70 global positioning system (GPS) stations, both from continuous and survey-mode networks, providing unprecedented details for a moderate normal faulting earthquake in Italy from GPS measurements. We use rectangular, uniform-slip, dislocations embedded in an elastic, homogeneous and isotropic half-space and a constrained, non-linear optimization algorithm, to solve for the best-fitting rectangular dislocation geometry and coseismic-slip distribution. We use a bootstrap approach to investigate uncertainties in the model parameters and define confidence bounds for all the inverted parameters. The rupture occurred on a N129°E striking and 50° southwestward dipping normal fault, in agreement with geological observations of surface breaks along the Paganica fault. Our distributed slip model exhibits a zone of relatively higher slip (〉60 cm) between ∼1.5 and ∼11 km depth, along a roughly downdip, NW–SE elongated patch, confined within the fault plane inverted assuming uniform-slip. The highest slip, of the order of ∼1 m, occurred on a ∼16 km2 area located at ∼5 km depth, SE of the mainshock epicentre. The analysis of model resolution suggests that slip at depth below ∼5 km can be resolved only at a spatial scale larger than 2 km, so a finer discretization of different asperities within the main patch of coseismic-slip is not allowed by GPS data. We compute the coseismic Coulomb stress changes in the crustal volume affected by the major aftershocks, and compare the results obtained from the uniform-slip and the heterogeneous-slip models. We find that most of the large aftershocks occurred in areas of Coulomb stress increase of 0.2–13 bar and that a deepening of the slip distribution down to a depth greater than 6 km in the SE part of the fault plane, in agreement with the inverted slip model, can explain the deepest, April 7, Mw 5.3 aftershock.
    Description: Published
    Description: 473-489
    Description: 1.9. Rete GPS nazionale
    Description: 3.2. Tettonica attiva
    Description: JCR Journal
    Description: reserved
    Keywords: Satellite geodesy ; Space geodetic surveys ; Earthquake ground motions ; Earthquake source observations ; Earthquake interaction, forecasting, and prediction ; 04. Solid Earth::04.03. Geodesy::04.03.01. Crustal deformations ; 04. Solid Earth::04.03. Geodesy::04.03.07. Satellite geodesy ; 04. Solid Earth::04.06. Seismology::04.06.01. Earthquake faults: properties and evolution ; 04. Solid Earth::04.06. Seismology::04.06.02. Earthquake interactions and probability ; 04. Solid Earth::04.06. Seismology::04.06.03. Earthquake source and dynamics ; 04. Solid Earth::04.06. Seismology::04.06.06. Surveys, measurements, and monitoring
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  • 20
    Publication Date: 2021-11-09
    Description: Il 24 maggio 2011, alle 12.40 UTC, la Rete Sismica Nazionale (RSN) dell’Istituto Nazionale di Geofisica e Vulcanologia (INGV) ha registrato un evento sismico di magnitudo (ML) 3.1 nel distretto sismico1 [Selvaggi et al., 1996] del Montefeltro (in provincia di Forlì-Cesena). Nelle successive due settimane sono stati localizzati dalla Sala di Sorveglianza Sismica della sede romana dell’INGV oltre 600 eventi di cui 13 di ML ≥ 3.0. Otto di questi eventi più energetici sono accaduti entro le prime 16 ore dalla prima scossa. L’evento di maggiore energia si è verificato la notte tra il 24 e il 25 maggio (ore 22.03 UTC del 24 maggio) con una magnitudo pari a ML 3.7 (Tabella 1). Considerando la peculiare evoluzione della sequenza nelle prime 24 ore dal primo evento, la prossimità dell'area epicentrale all’Alta Val Tiberina (AVT nel seguito) dove è attualmente in corso un esperimento sismico passivo [Progetto NOVAT2; Cattaneo et al., 2011; D’Alema et al., 2011] e l’apprensione che stava diffondendosi tra la popolazione, è stato ritenuto opportuno attivare le procedure di risposta ad una emergenza sismica e predisporre un intervento volto a migliorare la copertura strumentale dell'area. Il 25 maggio, in accordo con i colleghi INGV della Sezione di Pisa, dell’Osservatorio di Arezzo [Braun, 2006], della sede di Ancona e della Fondazione Prato Ricerche3, si è proceduto con l'istallazione di una rete sismica temporanea ad integrazione delle stazioni permanenti già presenti in zona. Nella giornata del 27 maggio, due delle stazioni temporanee sono state predisposte per la trasmissione in tempo reale alla Sala di Sorveglianza Sismica di Roma dei dati acquisiti, per migliorare la precisione delle localizzazioni prodotte. Nel contempo, sono stati curati dei comunicati informativi divulgati attraverso il sito web4 dell’Ente, parzialmente inclusi in questo lavoro, per dare una risposta alla popolazione interessata dalla sequenza e fortemente preoccupata dall’intensificarsi della sismicità. Il presente lavoro, la cui redazione è stata completata mentre la sequenza è ancora in corso, vuole essenzialmente descrivere le procedure che vengono attivate all’INGV in risposta ad una emergenza sismica e fornire uno strumento tecnico di supporto alla successiva elaborazione della base dati raccolta nel corso dell'esperimento. Viene quindi presentata una breve introduzione sulle conoscenze sismologiche dell’area interessata dalla sequenza, vengono descritti i comunicati emessi dall’INGV per informare i cittadini e viene descritto l’intervento della rete sismica temporanea, ovvero la tempistica dell'istallazione, la strumentazione utilizzata, e i siti occupati.
    Description: Published
    Description: 1-17
    Description: 1.1. TTC - Monitoraggio sismico del territorio nazionale
    Description: N/A or not JCR
    Description: open
    Keywords: Seismic Monitoring ; Emergency ; 04. Solid Earth::04.06. Seismology::04.06.06. Surveys, measurements, and monitoring
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  • 21
    Publication Date: 2017-04-04
    Description: L’uso del rumore ambientale nella valutazione della risposta sismica locale sta diventando molto frequente data la sua facile applicabilità e sensibilità alla variazione spaziale della geologia superficiale. Ciò lo rende particolarmente adatto nelle aree urbane, dove la natura delle unità geologiche affioranti è mascherata dagli interventi antropici. Il lavoro descrive i metodi di acquisizione e di trattamento dei dati, utilizzati durante una campagna svoltasi nell'area urbana di Catania.
    Description: Published
    Description: 1-30
    Description: 1.8. Osservazioni di geofisica ambientale
    Description: N/A or not JCR
    Description: open
    Keywords: NOISE ; ACQUISIZIONE ; URBANA ; CATANIA ; 04. Solid Earth::04.06. Seismology::04.06.06. Surveys, measurements, and monitoring ; 04. Solid Earth::04.06. Seismology::04.06.10. Instruments and techniques ; 05. General::05.01. Computational geophysics::05.01.01. Data processing
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  • 22
    Publication Date: 2020-11-20
    Description: Il presente lavoro è costituito dalla raccolta sistematica delle indagini macrosismiche eseguite in occasione dei terremoti più energetici verificatisi in Sicilia orientale dal Gennaio 2002 al Dicembre 2005. Esso rappresenta l’estensione, agli anni più recenti, della compilazione effettuata per il periodo 1999-2001 [Azzaro et al., 2002], e più in generale è inserita nel contesto delle attività di pronto intervento macrosismico effettuate regolarmente in ambito regionale dal 1988. L’esecuzione di rilievi in occasione di eventi sismici significativi è una prassi ormai consolidata nelle attività di monitoraggio dell’INGV, che recentemente ha istituito a tal fine il gruppo di lavoro denominato QUEST (QUick Earthquake Survey Team, DP n° 44 del 25/02/2004). I dati raccolti assolvono ad una duplice funzione: 1) nell’immediatezza di un evento sismico, a definire il quadro degli effetti a supporto degli interventi di Protezione Civile e della Comunità Scientifica; 2) a risolvere lacune e problemi interpretativi dei terremoti del passato attraverso il confronto con gli effetti macrosismici degli eventi attuali. La raccolta sistematica di dati macrosismici anche nel caso di eventi di bassa magnitudo, che interessano estensioni areali limitate come quelle etnee, è comunque importante per l’implementazione di banche dati e cataloghi macrosismici sia a livello locale che nazionale. Nel primo caso è stato aggiornato il catalogo macrosismico dei terremoti etnei [Azzaro et al., 2000], recentemente reso disponibile anche su Internet. Nel secondo caso, la più recente versione del catalogo parametrico dei terremoti italiani [Gruppo di Lavoro CPTI, 2004] utilizzata per la redazione della nuova mappa di pericolosità sismica del territorio nazionale (Ordinanza PCM 3274 del 20/03/2003), incorpora i dati dei terremoti siciliani al di sopra della soglia del danno pubblicati in Azzaro et al. [2002, 2003]. I rilievi macrosismici di seguito riportati sono relativi a tutti i terremoti oltre la soglia del danno verificatisi nel periodo considerato, ovvero a quegli eventi che sono stati avvertiti in modo significativo dalla popolazione (Figura 1). In larga parte si tratta di eventi di area etnea che, soprattutto nel corso del 2002, hanno provocato effetti macrosismici di rilievo. Tra i terremoti regionali riportati, non è incluso il terremoto di Palermo del 2002 per il quale è disponibile uno studio specifico [Azzaro et al., 2003].
    Description: Published
    Description: 1-62
    Description: 1.11. TTC - Osservazioni e monitoraggio macrosismico del territorio nazionale
    Description: N/A or not JCR
    Description: open
    Keywords: NONE ; Sicilia ; terremoti ; macrosismica ; 04. Solid Earth::04.06. Seismology::04.06.06. Surveys, measurements, and monitoring ; 05. General::05.02. Data dissemination::05.02.02. Seismological data
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  • 23
    Publication Date: 2017-04-04
    Description: Red Pompeian paintings, very famous for their deep intensity, are currently suffering from darkening. The origins of this darkening degradation are not clearly identified yet and remain a major issue for curators. In the specific case of cinnabar (HgS)-based red pigment, a photoinduced conversion into black metacinnabar is usually suspected. This work is focused on the blackening of red cinnabar paintings coated on a sparry calcite mortar. Different samples exhibiting different levels of degradation were selected upon visual observations and analyzed by synchrotron-based microanalytical techniques. Atomic and molecular compositions of the different debased regions revealed two possible degradation mechanisms. On one hand, micro X-ray fluorescence elemental maps show peculiar distributions of chlorine and sulfur. On the other hand, X-ray absorption spectroscopy performed at both Cl and S K-edges confirms the presence of characteristic degradation products: (i) Hg- Cl compounds (e.g., corderoite, calomel, and terlinguaite), which may result from the reaction with exogenous NaCl, in gray areas; (ii) gypsum, produced by the calcite sulfation, in black coatings. Metacinnabar is never detected. Finally, a cross section was analyzed to map the in-depth alteration gradient. Reduced and oxidized sulfur distributions reveal that the sulfated black coating consists of a 5-ím-thick layer covering intact cinnabar.
    Description: Published
    Description: 7484-7492
    Description: reserved
    Keywords: Microspectroscopy Analysis ; 05. General::05.09. Miscellaneous::05.09.99. General or miscellaneous
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  • 24
    ISSN: 0173-0835
    Keywords: ATPase ; Bacteria ; Sequence data analysis ; Elongation factor Tu ; Phylogeny ; Tree reconstruction ; Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Comparative sequence analysis of small subunit rRNA is currently one of the most important methods for the elucidation of bacterial phylogeny as well as bacterial identification. Phylogenetic investigations targeting alternative phylogenetic markers such as large subunit rRNA, elongation factors, and ATPases have shown that 16S rRNA-based trees reflect the history of the corresponding organisms globally. However, in comparison with three to four billion years of evolution the phylogenetic information content of these markers is limited. Consequently, the limited resolution power of the marker molecules allows only a spot check of the evolutionary history of microorganisms. This is often indicated by locally different topologies of trees based on different markers, data sets or the application of different treeing approaches. Sequence peculiarities as well as methods and parameters for data analysis were studied with respect to their effects on the results of phylogenetic investigations. It is shown that only careful data analysis starting with a proper alignment, followed by the analysis of positional variability, rates and character of change, testing various data selections, applying alternative treeing methods and, finally, performing confidence tests, allows reasonable utilization of the limited phylogenetic information.
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  • 25
    ISSN: 0173-0835
    Keywords: Outer membrane proteins ; Bacteria ; Postantibiotic effect ; Meropenem ; Capillary electrophoresis ; Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Persistent inhibition of bacterial growth, called postantibiotic effect (PAE), after a short exposure to a new carbapenem, meropenem, was determined in different strains of the Enterobacteriaceae family. Capillary electrophoresis (CE), as well as sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) were used to study the outer membrane protein (OMP) profiles before and after meropenem treatment. CE proved to be suitable for the characterization of the OMP profiles of bacteria. Significant changes in the electrophoretic patterns were observed, showing the consequential effect of meropenem on bacteria.
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  • 26
    Electronic Resource
    Electronic Resource
    Weinheim : Wiley-Blackwell
    Electrophoresis 19 (1998), S. 2317-2323 
    ISSN: 0173-0835
    Keywords: Protein profile ; Bacteria ; Capillary electrophoresis ; Lysate ; Enterobacteriaceae family ; Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: A fast and reproducible method was developed to characterize cell lysates by their electrophoretic profiles using capillary electrophoresis (CE). Characteristic and reproducible patterns were recorded for each bacterial strains when “dynamic sieving” CE, using a polymer solution in the capillary, was applied to distinguish four strains of the Enterobacteriaceae family. The electropherograms showed distinct differences when comparing them to the sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) protein profiles. This is certainly a result of the differences in the separation principles and in the detection methods of the two techniques.
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  • 27
    Electronic Resource
    Electronic Resource
    Weinheim : Wiley-Blackwell
    Electroanalysis 9 (1997), S. 395-398 
    ISSN: 1040-0397
    Keywords: DNA biosensor ; Escherichia coli ; Bacteria ; Water quality ; Sequence-specific detection ; Hybridization ; Environmental monitoring ; Screen-printed electrode ; Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: An electrochemical biosensor for the specific detection of short DNA sequences from the E. coli pathogen is described. This hybridization device relies on the immobilization of a 25-mer oligonucleotide probe, from the E. coli lacZ gene, onto a screen-printed carbon electrode. Chronopotentiometric detection of the Co(bpy)3+3 indicator is used for monitoring the hybridization event. Numerous variables of the assay protocol, including those of the probe immobilization step, the hybridization event, and the indicator association/detection, are characterized and optimized. Hybridization times of 2- and 30-min are sufficient for detecting 300- and 50 ng/mL, respectively, of the E. coli DNA target. Applicability to analysis of untreated environmental water samples is illustrated. Such single-use electrochemical sensors hold great promise for decentralized environmental and food testing for the E. coli pathogen.
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  • 28
    Electronic Resource
    Electronic Resource
    Weinheim : Wiley-Blackwell
    Electroanalysis 7 (1995), S. 904-906 
    ISSN: 1040-0397
    Keywords: Phenol ; Biosensors ; Bacteria ; Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: An amperometric phenol sensor, where Pseudomonus putida bacteria were immobilized on an amperometric oxygen sensor is described. Theoretical considerations of the steady-state concentration distribution of oxygen and substrate in diffusion-controlled microbial sensors are given. Validation of the theory was evaluated by comparing the experimental and theoretical data.
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  • 29
    Electronic Resource
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    Weinheim : Wiley-Blackwell
    Electrophoresis 16 (1995), S. 135-148 
    ISSN: 0173-0835
    Keywords: Two-dimensional polyacrylamide gel electrophoresis ; Haemophilus influenzae ; Bacteria ; Protein database ; Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: The proteins of nontypable and type b Haemophilus influenzae isolates were characterised using two-dimensional polyacrylamide gel electrophoresis (2-D PAGE). Coomassie Brilliant Blue R-250 was used for protein detection. Two hundred and twenty eight proteins were resolved from whole cell lysates prepared from a standard nontypable H. influenzae strain (designated HI-64443) when isoelectric focusing was used for the first-dimensional separation of 2-D PAGE. When nonequilibrium pH gel electrophoresis (NEPHGE) was used to separate basic proteins in the first dimension, 50 proteins were detected for HI-64443; 20 of the basic proteins detected were considered to be unique for this separation protocol. The apparent molecular weights and isoelectric points were determined for 82 of the proteins resolved for HI-64443. The variation of the proteins from the standard bacterial strain (HI-64443) was determined for nontypable H. influenzae isolates. On the basis of their electrophoretic mobilities, 17.5% of the proteins of HI-64443 were shared by four other non-typable H. influenzae strains analysed. These data identified both conserved and variable proteins among the nontypable H. influenzae isolates analysed. The results obtained indicated that 2-D PAGE was able to discriminate nontypable H. influenzae into population clones identified by other procedures. The 2-D protein profiles obtained for type b H. influenzae strains were similar to those obtained for nontypable H. influenzae strains. The extent of the protein variation observed between type b and nontypable H. influenzae strain was similar to that observed among nontypable strains alone. These data are discussed in relation to the application of 2-D PAGE as a tool for studies on bacterial epidemiology and for the analysis of the genome structure and gene expression of Haemophilus influenzae.
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  • 30
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Microscopy Research and Technique 25 (1993), S. 267-275 
    ISSN: 1059-910X
    Keywords: Agarose encapsulation ; TEM specimen preparation ; Bacteria ; Yeast ; Mitochondria ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Natural Sciences in General
    Notes: Agarose, agar, and gelatin were initially compared as encapsulation media for 3 structurally diverse particulate specimens: bacteria, yeast, and mitochondria. Agarose proved superior to both gelatin and agar for ease of handling and overall image quality (minimum background). All sample types exhibited high quality fixation and structural detail with no heat damage from the agarose medium. Based on this finding, we further characterized agarose encapsulation as affected by post-fixation, en bloc staining and resin type. Osmium tetroxide post-fixation, followed by en bloc uranyl acetate staining, could be performed without an increase in the electron density of the encapsulation medium. Agarose proved successful as an encapsulation medium regardless of the resin type or preparation protocol, thus providing flexibility in experimental design and excellent results over a range of variables. © 1993 Wiley-Liss, Inc.
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  • 31
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Microscopy Research and Technique 24 (1993), S. 400-422 
    ISSN: 1059-910X
    Keywords: Cryofixation ; Freeze substitution ; Low temperature embedding ; Lowicryl ; Fine structural preservation ; Extracellular material ; Bacteria ; Algae ; Cyanobacteria ; Fungi ; Transgenic plants ; Wheat ; Barley ; Tobacco ; Conidia ; Hyphae ; Haustoria ; Plant pathogen interface ; Molecular preservation ; Retention diffusible elements ; Microanalysis ; Autoradiography ; Fungicides ; Lipids ; Immunocytochemistry ; Protein antigenicity ; Elicitor ; Extensin ; Foreign proteins ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Natural Sciences in General
    Notes: Considering the increasing necessity for improved preparation techniques in biological electron microscopy as a basis for the identification and localization of cellular substances within the compartments of the cell, this review is focussed on the method of freeze substitution as an important link between the cryofixation (ultrarapid freezing) and resin embedding of biological specimens. The theory and practice of freeze substitution is summarized with particular interest in the physical and thermodynamic as well as in the chemical basis of this technique. A survey of practical aspects of the technical process of freeze substitution concerning the equipment and various protocols successfully applied in biological systems is also given. The main advantage of freeze substitution versus conventional chemical fixation is seen in the maintenance of the hydration shell of molecules and macromolecular structures. This results in an improved fine structural preservation, superior retention of the antigenicity of proteins and decreased loss of unbound, diffusible cellular components. Examples of excellent visualization of the ultrastructure of macro-molecular complexes (nucleic acids, extracellular material, membranes etc.), small organisms (bacteria, algae, cyanobacteria and fungi) and large biological samples such as plant and animal tissue as well as the plant-pathogen (fungus) interface and infection structures are presented. Recent data on the molecular characterization of freeze-substituted biological tissue are exemplified with special emphasis on the subcellular detection of soluble components (elements, lipids, proteins and drugs) and the inter-/intracellular localization of proteins including foreign proteins in transgenic plants. The molecular analysis of freeze-substituted specimens is achieved by the combination of low temperature preparation techniques in biological electron microscopy with various detection methods such as X-ray microanalysis, immunocytochemistry and high resolution autoradiography. © 1993 Wiley-Liss, Inc.
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  • 32
    Electronic Resource
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    Weinheim : Wiley-Blackwell
    Angewandte Chemie International Edition in English 32 (1993), S. 1398-1408 
    ISSN: 0570-0833
    Keywords: Bacteria ; Degradation ; Environmental chemistry ; Hydrocarbons ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The natural potential of bacteria for the biological degradation of synthetic compounds is greater than is commonly supposed and extends to many heteroarenes and even some chloroarenes. An increase in the number of substituents on the aromatic ring or a certain substitution pattern is what confers xenobiotic character to a compound. In addition, when enzymes with low substrate specificity encounter foreign compounds with random variations, products with very strong xenobiotic character often result. In this case, changing the conditions or introducing a cooperation between several different types of bacteria can be used to degrade these compounds. Finally, mineralization, the complete breakdown of organic substances into carbon dioxide and inorganic salts, of xenobiotics previously regarded as persistent can be achieved by taking advantage of natural or induced gene transfer to construct hybrid degradative pathways. After an introduction to the world of bacteria and their place in Nature, we will describe their natural potential for biodegradation with reference to aliphatic and aromatic hydrocarbons. The discussion will then turn to the types of the substituents that confer xenobiotic properties to compounds and how these compounds are degraded despite their xenobiotic character.
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  • 33
    Electronic Resource
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    Weinheim : Wiley-Blackwell
    Journal of High Resolution Chromatography 11 (1988), S. 668-670 
    ISSN: 0935-6304
    Keywords: Gas chromatography, capillary ; Sample extraction ; Membrane filter ; Bacteria ; Fatty acids ; Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Additional Material: 2 Ill.
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  • 34
    Electronic Resource
    Electronic Resource
    Weinheim : Wiley-Blackwell
    Angewandte Chemie International Edition in English 27 (1988), S. 1040-1049 
    ISSN: 0570-0833
    Keywords: Protein phosphorylation ; Phosphorylation ; Bacteria ; Gene expression ; Metabolism ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The importance of protein phosphorylation to the regulation of physiological processes in eukaryotic cells has been known for almost half a century. In contrast, the first conclusive evidence for functionally relevant protein phosphorylation in bacteria was obtained less than a decade ago. To date, only five functionally well-characterized bacterial proteins have been shown to be regulated by reversible phosphorylation. (1) Phosphorylation of isocitrate dehydrogenase in Escherichia coli controls the relative flux of carbon through the Krebs cycle and the glyoxylate shunt. (2) In gram-positive bacteria, phosphorylation of HPr, a phosphoryl carrier protein of the phosphoenolypyruvate-dependent sugar phosphotransferase system, regulates carbohydrate uptake via this system. (3) Phosphorylation of glycerol kinase in Streptococcus faecalis probably serves to regulate the degradation of glycerol. (4) Phosphorylation of the nitrogen regulatory protein I (NR1) in E. coli controls expression of genes encoding the enzymes which participate in nitrogen metabolism. (5) Phosphorylation of citrate lyase ligase in Clostridium sphenoides regulates the conversion of citrate lyase from the inactive sulfhydryl form to the active acetylated form. Recent investigations have shown that more than one hundred proteins in E. coli are phosphorylated. It can therefore be anticipated that protein phosphorylation will prove to be as important to the regulation of physiological processes in bacteria as it is in eukaryotes.
    Additional Material: 6 Ill.
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  • 35
    ISSN: 0886-9383
    Keywords: Pattern recognition ; SIMCA ; PCA ; Classification ; Bacteria ; Pyrolysis mass spectra ; Recall ; Cross-validation ; Indicator function ; Pseudo random data sets ; Leave-x-out ; Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: As part of a critical evaluation of the pattern recognition method SIMCA, three data sets containing pyrolysis mass spectra from bacteria were analysed using the SIMCA classifier. Each set consisted of two classes, Pseudomonas and Serratia bacteria, each class containing ten mass spectra and each mass spectrum having 285 spectral features.The results indicate that for these py-MS data sets, with low object/feature ratio, the SIMCA classifier produces satisfactory results at the first classification level. At the second level, however, the classification results are not reliable, even after deleting outliers. A comparison of the cross-validation method and Malinowski's indicator function for the determination of the number of significant principal components showed that the cross-validation method is less stable and therefore less reliable than the indicator function.
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  • 36
    Electronic Resource
    Electronic Resource
    Weinheim : Wiley-Blackwell
    Angewandte Chemie International Edition in English 18 (1979), S. 337-350 
    ISSN: 0570-0833
    Keywords: Permeability ; Membranes ; Bacteria ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The outer membrane of Gram-negative bacteria is an attractive system for the study of the structure-function relationships in biological membranes. This membrane has, inter alia, the task of regulating the inflow of nutrients and outflow of waste products. Investigations with the aid of mutants showed that there are at least two general pathways for the diffusion of small molecules across the outer membrane: one for hydrophobic and one for hydrophilic compounds. In the case of the “hydrophobic pathway” the hydrophobic compound dissolves in the interior of the membrane and then crosses the membrane in accordance with the partition coefficient. In wild-type forms of enteric bacteria this pathway cannot be used - presumably owing to the absence of regions with phospholipid bilayers. Small hydrophilic molecules, on the other hand, penetrate the membrane through water-filled pores.
    Additional Material: 15 Ill.
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  • 37
    Electronic Resource
    Electronic Resource
    Weinheim : Wiley-Blackwell
    Angewandte Chemie International Edition in English 12 (1973), S. 517-528 
    ISSN: 0570-0833
    Keywords: Extrachromosomal DNA ; Bacteria ; DNA ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In addition to chromosomal DNA carrying the genetic information of the cell, many bacterial cells contain smaller circular DNA factors known as plasmids or episomes. These genetic elements endow the cell with additional biochemical capabilities. The fertility factors (F and F′), the antibiotic resistance factors (R), the colicinogenic factors (Col), the hemolytic factors (Hly), and other extrachromosomal DNA systems are described. These small DNA molecules can be isolated, and are therefore particularly suitable for the investigation of DNA replication and the stable establishment of genetic material in the bacterial cell.
    Additional Material: 16 Ill.
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  • 38
    ISSN: 0570-0833
    Keywords: Lipopolysaccharides ; Lipopolysaccharides ; Polysaccharides ; Bacteria ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Lipopolysaccharides, which are located in the cell wall of gram-negative bacteria, are characterized by their biological versatility. They represent the O antigens of the bacteria, they are potent endotoxins, and they often function as the receptor sites for bacteriophages. The study of the mode of action of lipopolysaccharides and the search for structures in the macromolecules that are responsible for biological activity became promising when principles of the chemical fine structure of lipopolysaccharides were identified. The following review summarizes the results of recent investigations regarding the structure of lipopolysaccharides, their biosynthesis and its genetic determination.
    Additional Material: 16 Ill.
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  • 39
    ISSN: 0570-0833
    Keywords: Lipids ; Tubercle bacillus ; Bacteria ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The extensive studies of R.J. Anderson between 1926 and 1946 nad the subsequent work of Stenhagen, Polgar, and Cason, and of the author's laboratory have demonstrated the astonishing abilities of the tubercle bacillus in synthetizing lipids. Numerous branched-chain fatty acids, glycolipids, peptidolipids, and peptidoglycolipds have been isolated, and their structures more or less elucidated. Such work is of interest not only to natural-priduct chemists, and biochemists, but especially to biologists and pathologists who are concerned with the harmful effects caused by the tubercle bacillus. The present article discusses chiefly three points: 1. The biogenesis of the branched-chain fatty acids. - 2. The structures of several glyco-, peptido-, and peptidoglycolipids. - 3. Adjuvant activity and immunization by the lipids of the tubercle bacillus.
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