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  • 101
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    Wiley
    In:  Biologie in unserer Zeit, 23 (2). pp. 97-101.
    Publication Date: 2016-06-17
    Description: Etwa ein Drittel des von Menschen freigesetzten Treibhausgases Kohlendioxid (CO2) reichert sich in der Atmosphäre an und verstärkt dort den Treibhauseffekt. Zwei Drittel dieses Eintrags werden der Atmosphäre wieder entzogen und an anderer Stelle deponiert. Doch nur für etwa die Hälfte des wieder gebundenen Kohlendioxids kennen wir bisher die Senken. Wo bleibt der Rest? Um Aussagen über den Verbleib weiterer CO2-Emissionen und damit über die zukünftige Entwicklung des Treibhauseffektes machen zu können, bedarf es der Lösung des Kohlenstoffrätsels.
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  • 102
    Publication Date: 2017-07-04
    Description: 1 Plants must either tolerate consumption or defend themselves against grazer attacks. Selection for phenotypically plastic antiherbivory responses has been suggested for many plants, including a few species of seaweed, but little is known about its specificity or seasonality. 2 Multi-factorial experiments tested the effects of consumer identity (Littorina brevicula vs. Haliotis discus) and season (summer vs. autumn) on the induction of antiherbivory defences in the brown seaweed Ecklonia cava. Following a grazer-free acclimation phase, algae were incubated with grazers (treatment phase) and, subsequently, without grazers (recovery phase). Feeding preference assays, were used to assess differences in consumption rates between grazer-exposed and control plants. 3 In summer, Littorina, but not Haliotis, induced defence in Ecklonia. This defence vanished by the end of the recovery phase. In autumn, neither exposure to direct attack nor to waterborne cues induced defensive responses. 4 Both consumer identity and season of consumption can influence the ability of a given macroalgal species to induce antiherbivory defences. Tailoring such responses to spatial and temporal variation in grazer pressure could have profound ecological implications, for example changing food webs and community structure.
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  • 103
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    Wiley
    In:  Wiley, New York, USA, 626 pp. 2nd revised edition
    Publication Date: 2013-05-17
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  • 104
    Publication Date: 2016-06-06
    Description: The present study examines sedimentation rates in the eastern Gotland Basin using a variety of methods that reveal considerable heterogeneity in the rates, both spatially and temporally. High-resolution seismic recordings and correlation with long sediment cores indicate increased thickness of strata and higher sedimentation rates (0.75 mm a-1) in the eastern part of the basin than in the western part (0.23 mm a-1) since the Littorina transgression some 8000 14C years BP. This difference is apparently a consequence of a counterclockwis e near-bottom circulation in the basin with periodically high current speeds that cause winnowing on the steep SE slope of the basin and differential settling of sediments in areas of low current speeds. On shorter time scales, recent sediment accumulation rates based on radiometric dating (210Pb) are in general twice as high as those observed 25 years ago using the same method. The higher modern rates, compared to those of the 1970s, may partly be due to increased eutrophication, as more carbon is buried in the sediment, and partly due to increased erosion in shallow water areas. However, strong lateral variations are evident. The average sediment accumulation rates vary between 119 and 340 gm-2 a-1 (corresponding to sedimentation rates of 2.1–2.5 mm a-1) in the deepest part of the basin. Very high rates (6100 g m-2 a-1, corresponding to sedimentation rates of 30 mm a-1) are observed on an intraslope basin site (offshore Latvia) at a water depth of only 70 m. The radiometrically determined sediment accumulation rates are up to three times higher than those estimated from average water column concentrations of suspended matter and from sediment trap flux rates. The discrepancy suggests that sedimentation in the deep basin may have a substantial contribution from near-bottom lateral transport.
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  • 105
    Publication Date: 2020-07-27
    Description: Aspects of the formation of bone analog composites at 37°C are described. The composites are composed of hydroxyapatite (HAp) and the calcium salt of a biocompatible polymer and are capable of forming under in vivo conditions. Composite formation involves the formation of monolithic HAp from particulate calcium phosphate precursors while Ca ions liberated to the aqueous medium in which this reaction is occurring form crosslinks with the acidic polymer. The reactants are poly[bis(carboxylatophenoxy)phosphazene] (acid-PCPP), tetracalcium phosphate [Ca4(PO4)2O, TetCP], and anhydrous dicalcium phosphate (CaHPO4, DCPA). The effects of the proportion of polymer (5, 10, or 15 wt %) on the kinetics of HAp formation were studied. Compositional evolution of the solid calcium phosphates present was followed by X-ray diffraction and infrared spectroscopy analyses. HAp formation through a dissolution-precipitation process provided a mildly alkaline medium suitable for deprotonation of the acid-PCPP and for the formation of the calcium crosslinks, as monitored by infrared spectroscopy. Concurrence of crosslinking of the polymer and HAp formation was established, indicating true composite formation can be realized at physiologic temperature.
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  • 106
    Publication Date: 2017-02-27
    Description: We characterized 37 single nucleotide polymorphism (SNP) makers for eelgrass Zostera marina. SNP markers were developed using existing EST (expressed sequence tag)-libraries to locate polymorphic loci and develop primers from the functional expressed genes that are deposited in The ZOSTERA database (V1.2.1). SNP loci were genotyped using a single-base-extension approach which facilitated high-throughput genotyping with minimal optimization time. These markers show a wide range of variability among 25 eelgrass populations and will be useful for population genetic studies including evaluation of population structure, historical demography, and phylogeography. Potential applications include haplotype inference of physically linked SNPs and identification of genes under selection for temperature and desiccation stress.
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  • 107
    Publication Date: 2019-09-23
    Description: 1. Tracer experiments with two diatoms labelled with 13C (Nitzschia palea) and 15N (Fragilaria crotonensis), were conducted to investigate feeding selectivity and interspecific competition between the grazers Asellus aquaticus (Isopoda, Crustacea) and Potamopyrgus antipodarum (Hydrobiidae, Gastropoda). Conventional methods, such as cell counts and estimated biovolume, were used first to detect feeding preferences within the different grazer treatments. 2. The results revealed a significant decline in algal biovolume in all grazer treatments and no indications of active selectivity were observed. In contrast to conventional methods, measurements based on isotope signatures showed strong differences in tracer uptake, thus indicating different degrees of assimilation and digestion by the two grazers. 3. The selectivity index Q, which provides information on the uptake ratio of 13C to 15N, showed a significant time effect for both grazer species and a significant difference between single- and mixed-grazer treatments for P. antipodarum. Thus, this technique enabled the direct quantification of the uptake by grazers and, therefore, served as an ideal tool for the detection of passive selectivity. 4. Our results indicate a shift in feeding preferences related to between-species competition and a potential divergence of trophic niches when species coexist.
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  • 108
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    Wiley
    In:  International Review of Hydrobiology, 93 (4-5). pp. 479-488.
    Publication Date: 2019-07-25
    Description: It is a well accepted fact that nutrient limitation of plants affects the growth and survival of herbivores, generally leading to lower performance of herbivores feeding on nutrient stressed plants. The effect of plants' growing conditions on predatory organisms, feeding one trophic level up, has been much less studied, and there is a general consensus that such effects would be small as herbivores often show relatively strong homeostasis with respect to their nutrient content. Here, we challenge this view, and show from several examples that despite the fact that herbivores buffer much of the variance in nutrient stoichiometry of their food, effects of growing conditions of the primary producers can travel up the food chain. We discuss the implications of these findings, and argue that phosphorus limitation of secondary consumers might be more common in marine than in freshwater systems.
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  • 109
    Publication Date: 2019-01-21
    Description: We investigated the wound response of the commercially important red alga, Gracilaria chilensis, in order to obtain insight into its interaction with epiphytic pests. After wounding, the host releases free fatty acids as well as the hydroxylated eicosanoids, 8R-hydroxy eicosatetraenoic acid (8-HETE) and 7S,8R-dihydroxy eicosatetraenoic acid (7,8-di-HETE). While the release of free arachidonic acid and subsequent formation of 8-HETE is controlled by phospholipase A, 7,8-di-HETE production is independent of this lipase. This dihydroxylated fatty acid might be directly released from galactolipids. Physiologically relevant concentrations of oxylipins reduced spore settlement of Acrochaetium sp. (Rhodophyta, Acrochaetiaceae) and suppressed the development of hapteria in Ceramium rubrum (Rhodophyta, Ceramiaceae) when these model epiphytes were exposed to artificial surfaces that contained 8-HETE or 7,8-di-HETE. Thus, the immediate release of oxylipins can be seen as G. chilensis defence against epiphytes.
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  • 110
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    Wiley
    In:  Internationale Revue der gesamten Hydrobiologie und Hydrographie, 65 (6). pp. 835-848.
    Publication Date: 2017-05-31
    Description: Tubificid and enchytraeid oligochaetes are common members of the interstitial fauna of sandy beaches. Their abundance dynamics, life cycles and distribution patterns were investigated at two beaches on the western Baltic Sea and at a North Sea beach (Isle of Sylt). Populations of 115,000 ind./m2 were found at protected Baltic beaches. Reproduction of the tubificids, Phallodrilus monospermathecus and Spiridion insigne takes place within a well defined breeding period once a year. The market horizontal and vertical distribution patterns of various tubificid and enchytraeid species are elucidated by preference reactions to several physiographic parameters, such as oxygen and water content of the sediment, and salinity.
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  • 111
    Publication Date: 2017-07-03
    Description: The monthly variation in reproductive cycle, condition factor (fatness), gonad index (GI), ovarian egg diameter and biochemical composition [RNA, DNA content and their ratio RNA/DNA (R/D)] were compared to determine the spawning season of the purplish Washington clam, Saxidomus purpuratus, collected from the west sea of Taean, Korea. All these factors were correlated to the spawning season from May to October. Monthly variation and concentration of the R/D ratio especially represented indicative information about the processes of gonad development and spawning patterns. The increases in R/D ratio in the ovaries corresponded with increases in ovarian egg diameters and the GI during the spawning season. The peak of R/D and RNA content in females was a good indicator of sexual maturation and the DNA content in males. During winter between November and January, the value of fatness, GI, egg size, RNA and DNA content were lower than in other seasons, indicating depletion of energy reserves and lower metabolic demands because of colder temperatures.
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  • 112
    Publication Date: 2019-09-23
    Description: Seismic and volcanic activities in Central Java, Indonesia, the area of interest of this study, are directly or indirectly related to the subduction of the Indo-Australian plate. In the framework of the MERapi AMphibious EXperiments (MERAMEX), a network consisting of about 130 seismographic stations was installed onshore and offshore in Central Java and operated for more than 150 days. In addition, 3-D active seismic experiments were carried out offshore. In this paper, we present the results of processing combined active and passive seismic data, which contain traveltimes from 292 local earthquakes and additional airgun shots along three offshore profiles. The inversion was performed using the updated LOTOS-06 code that allows processing for active and passive source data. The joint inversion of the active and passive data set considerably improves the resolution of the upper crust, especially in the offshore area in comparison to only passive data. The inversion results are verified using a series of synthetic tests. The resulting images showan exceptionally strong low-velocity anomaly (−30 per cent) in the backarc crust northward of the active volcanoes. In the upper mantle beneath the volcanoes, we observe a low-velocity anomaly inclined towards the slab, which probably reflects the paths of fluids and partially melted materials in the mantle wedge. The crust in the forearc appears to be strongly heterogeneous. The onshore part consists of two high-velocity blocks separated by a narrow low-velocity anomaly, which can be interpreted as a weakened contact zone between two rigid crustal bodies. The recent Java Mw = 6.3 earthquake (2006/05/26-UTC) occurred at the lower edge of this zone. Its focal strike slip mechanism is consistent with the orientation of this contact.
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  • 113
    Publication Date: 2018-06-25
    Description: The facultative red algal epiphyte Acrochaetium sp. liberated spores preferentially and recruited more successfully in laboratory cultures when its host Gracilaria chilensis C. J. Bird, McLachlan et E. C. Oliveira was present. The same effect was also induced by cell-free medium from G. chilensis, suggesting it contained a molecular signal. Antibiotics prevented spore release in Acrochaetium sp., even when G. chilensis was present, suggesting a prokaryotic origin of the signal. Simultaneous application of N-butyl-homoserine-lactone (BHL) restored the spore-release capacity, which demonstrated that spore release was not directly inhibited by the antibiotics and indicated that bacterially generated N-acyl-homoserine-lactones (AHLs) regulate spore release. An involvement of AHL was further indicated by the fact that two different halofuranone inhibitors of AHL receptors also inhibited spore release when they were applied at relatively low concentrations. Of seven different AHLs tested, only BHL induced the effect. However, BHL was only active at relatively high concentrations (100 μM), and it was not detected in spore-release-inducing medium of G. chilensis. Another water-soluble AHL or an AHL structure analog is therefore probably the active compound in G. chilensis cultures. The data presented demonstrate that life cycle completion in Acrochaetium sp. strongly depends on bacteria, which are not always present in sufficient numbers on the alga itself. Exogenous bacteria that are associated with G. chilensis or with other potential substrates may therefore trigger timely spore liberation in Acrochaetium sp., provided that the necessary concentration of AHL is reached. This first finding of AHL perception in a red alga confirms that AHL signalling is more widespread among eukaryotes than was thought until recently. However, spore release of a second red alga, Sahlingia subintegra (Rosenv.) Kornmann, was unaffected by AHL, and the reaction observed is therefore not universal.
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  • 114
    Publication Date: 2018-07-13
    Description: Fluids are suspected to play a major role in the nucleation and rupture propagation of earthquakes. In Chile, seismological data were previously interpreted to indicate that fluids captured in the fault zone are released periodically during large underthrust earthquakes, leading to post-seismic fluid flow. In central Chile, heat flow derived from the presence of a bottom simulating reflector (BSR) show a smooth trend across the margin. BSR-derived data are in excellent agreement with thermal subduction zone models. Over the young accretionary prism, both BSR-derived and measured surface heat flow support a common trend. Landwards of the backstop, however, measured heat flow triples over a distance of 20–30 km, producing a profound discrepancy to the BSR-derived data. We suggest that this disparity is related to transient flow of warm fluids through the gas hydrate stability zone possibly caused by fluids released after large underthrust earthquakes. Such flow events may inherently affect the distribution of solid gas hydrates between the seafloor and the BSR.
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  • 115
    Publication Date: 2017-06-09
    Description: 1 Several theoretical models predict under what conditions maximum species diversity can be maintained, and they are often used to develop effective ecosystem management plans. 2 Two models that are currently used to predict patterns of species diversity were empirically tested in marine subtidal benthic communities of different successional stages. 3 The two models were: the interactive effects of nutrient availability and disturbance frequency proposed by Kondoh (2001; Proceedings of the Royal Society London B, 268, 269–271), and the intermediate disturbance hypothesis (IDH) proposed by Connell (1978; Science, 199, 1302–1310). 4 Interactive effects were found to be transient and only occurred in the older communities, while the unimodal pattern suggested by the IDH was not supported in either successional stage. 5 It is concluded that these models are very general and thus lack sufficient explanatory power. Both models require a number of specific prerequisites for maximum diversity to be found, and though applicable in many different ecosystems they need to be refined as tools in order that they can be effectively used in habitat management plans.
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  • 116
    Publication Date: 2017-09-26
    Description: Mid-ocean spreading and accompanying hydrothermal activities result in huge areas with exposure of minerals rich in reduced chemicals – basaltic and peridotitic rocks as well as metal sulfide precipitates – to the oxygenated seawater. Oxidation of Fe and S present in these rocks provides an extensive long-term source of energy to lithotrophs. Investigation of lipid biomarkers and their carbon isotope ratios from a massive iron sulfide of an inactive sulfide mound or inactive chimney sampled at the western flank of the Turtle-Pits hydrothermal field (Mid-Atlantic Ridge, 5°S) revealed a unique lipid distribution. The bacterial fauna appears to be dominated by chemolithotrophs with a distinct lipid composition mainly comprising of iso-branched fatty acids and nonisoprenoidal dialkyl glycerol diethers partially including the very rare macrocyclic cores with 30–35 carbon atoms (including 13,16-dimethyloctacosane and 5,13,16-trimethyloctacosane). The Bacteria are accompanied by most likely hydrogen/CO2-dependent methanogenic Archaea (e.g. Methanococcus) as well as other Archaea with a different life style (e.g. Ferroplasma). Alike some of the bacterial lipids the archaeal lipids predominantly consist of macrocyclic diethers including one C40 and one C41 isoprenoid. Structural homologues of the latter are so far only reported from a methanogenic archaeum and a Pleistocene sulfur deposit. Compound-specific analyses of the stable isotope ratios revealed δ13C values for the majority of bacterial and archaeal lipid components of about 0‰ (vs. VPDB), indicative for chemolithoautotrophically fixed carbon which is, for distinct pathways, accompanied by only negligible fractionations. However, the presence of methanogenic Archaea is indicated by 13C-depleted isoprenoidal lipids (δ13C ~ –50‰) characteristic for certain CO2-reducing methanogens synthesizing lipids via acetyl CoA.
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  • 117
    Publication Date: 2019-02-27
    Description: A new methodology is presented to reconstruct migration pathways of individual fish inhabiting ecosystems with moderate-to-strong gradients in temperature or salinity. The method uses measurements of ambient pressure, temperature and salinity obtained from electronic data storage tags attached to individual fish and is particularly applicable in areas with negligible tides. We demonstrate the method with Baltic cod. Hydrographic fields obtained from hydrodynamic modelling were used as a geolocation database to identify daily positions of Baltic cod by comparison with the environmental data collected by the tags. Using randomly distributed individual parameter perturbations in the range of the instrument precision of the tag we simulated a cod migrating through the Baltic Sea. The distance between the prescribed and geolocated positions of this artificial cod was on average 2.9 ± 4.7 (SD) km. Subsequently, the method was used to reconstruct migration routes of 10 real cod tagged in the Bornholm Basin of the Baltic Sea in early spring 2003. Differences were compared between the tag data and the geolocation database. The uncertainty in geolocation at recapture day was on average 75 ± 23 (SD) km, as shown by comparison between geolocated position and recapture position.
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  • 118
    Publication Date: 2018-07-18
    Description: The ultramafic-hosted Logatchev hydrothermal field (LHF) on the Mid-Atlantic Ridge is characterized by high hydrogen and methane contents in the subseafloor, which support a specialized microbial community of phylogenetically diverse, hydrogen-oxidizing chemolithoautotrophs. We compared the prokaryotic communities of three sites located in the LHF and encountered a predominance of archaeal sequences affiliated with methanogenic Methanococcales at all three. However, the bacterial composition varied in accordance with differences in fluid chemistry between the three sites investigated. An increase in hydrogen seemed to coincide with the diversification of hydrogen-oxidizing bacteria. This might indicate that the host rock indirectly selects this specific group of bacteria. However, next to hydrogen availability further factors are evident (e.g. mixing of hot reduced hydrothermal fluids with cold oxygenated seawater), which have a significant impact on the distribution of microorganisms
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  • 119
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    Wiley
    In:  Geophysical Journal International, 178 (2). pp. 742-752.
    Publication Date: 2019-09-23
    Description: We examine micro-earthquake records from a dense temporary array of ocean bottom seismometers (OBS) and hydrophones that has been installed from September to November 2005 at the trench outer rise offshore Nicaragua. Approximately 1.5 locatable earthquakes per day within the array of 110 × 120 km show the high seismic activity in this region. Seismicity is restricted to the upper ∼15 km of the mantle and hence where temperatures reach 350–400 °C, which is smaller than values observed for large mantle intraplate events (650 °C). Determination of moment tensor solutions suggest a change of the stress region from tensional in the upper layers of the oceanic plate to compressional beneath. The neutral plane between both regimes is located at ∼6–9 km beneath Moho and thus very shallow. Fluids, which are thought to travel through the tensional fault system into the upper mantle, may not be able to penetrate any deeper. The earthquake catalogue, which seems to be complete for magnitudes above Mw = 1.6–1.8, suggests a strong change of the lithospheric rheology when approaching the trench. And b-factors, that is the ratio between small and large earthquakes increase significantly in the closest 20 km to the trench axis, implying that the crust and upper mantle is massively weakened and hence ruptures more frequently but under less release of stress. We explain this with a partly serpentinized upper mantle.
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  • 120
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    Wiley
    In:  Journal of Applied Ichthyology, 25 . pp. 223-227.
    Publication Date: 2017-07-03
    Description: Length–weight relationships are lacking for most deep-sea fishes. This study presents length–weight relationships for 42 species from the western Bering Sea. Results show significantly different relationships between females and males for 11 species and between juveniles and adults of four species. A plot of length–weight estimates, log a over b, showed the deep-sea fishes in this study to be more of the elongated shape compared with other marine fishes.
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  • 121
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    Wiley
    In:  Geophysical Journal International, 168 (2). pp. 551-570.
    Publication Date: 2018-07-13
    Description: We determine the 3-D in situ shear-wave velocities of shallow-water marine sediments by extending the method of surface wave tomography to Scholte-wave records acquired in shallow waters. Scholte waves are excited by air-gun shots in the water column and recorded at the seafloor by ocean-bottom seismometers as well as buried geophones. Our new method comprises three steps: (1) We determine local phase-slowness values from slowness-frequency spectra calculated by a local wavefield transformation of common-receiver gathers. Areal phase-slowness maps for each frequency used as reference in the following step are obtained by interpolating the values derived from the local spectra. (2) We infer slowness residuals to those reference slowness maps by a tomographic inversion of the phase traveltimes of fundamental Scholte-wave mode. (3) The phase-slowness maps together with the residuals at different frequencies define a local dispersion curve at every location of the investigation area. From those dispersion curves we determine a model of the depth-dependency of shear-wave velocities for every location. We apply this method to a 1 km2 investigation area in the Baltic Sea (northern Germany). The phase-slowness maps obtained in step (2) show lateral variation of up to 150 per cent. The shear-wave velocity models derived in the third step typically have very low values (60–80 m s−1) in the top four meters where fine muddy sands can be observed, and values exceeding 170 m s−1 for the silts and sands below that level. The upper edge of glacial till with shear-wave velocities of 300–400 m s−1 is situated approximately 20 m below sea bottom. A sensitivity analysis reveals a maximum penetration depth of about 40 m below sea bottom, and that density may be an important parameter, best resolvable with multimode inversion.
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  • 122
    Publication Date: 2018-04-26
    Description: The effects of nitrate, phosphate, and iron starvation and resupply on photosynthetic pigments, selected photosynthetic proteins, and photosystem II (PSII) photochemistry were examined in the diatom Phaeodactylum tricornutum Bohlin (CCMP 1327). Although cell chlorophyll a (chl a) content decreased in nutrient‐starved cells, the ratios of light‐harvesting accessory pigments (chl c and fucoxanthin) to chl a were unaffected by nutrient starvation. The chl a‐specific light absorpition coefficient (a*) and the functional absorption cross‐section of PSII (σ) increased during nutrient starvation, consistent with reduction of intracellular self‐shading (i.e. a reduction of the “package effect”) as cells became chlorotic. The light‐harvesting complex proteins remained a constant proportion of total cell protein during nutrient starvation, indicating that chlorosis mirrored a general reduction in cell protein content. The ratio of the xanthophylls cycle pigments diatoxanthin and diadinoxanthin to chl a increased during nutrient starvation. These pigments are thought to play a photo‐protective role by increasing dissipation of excitation energy in the pigment bed upstream from the reaction centers. Despite the increase in diatoxanthin and diadinoxanthin, the efficiency of PSII photochemistry, as measured by the ration of variable to maximum fluorescence (Fv/Fm) of dark‐adapted cells, declined markedly under nitrate and iron starvation and moderately under phosphate starvation. Parallel to changes in Fv/Fm were decreases in abundance of the reaction center protein D1 consistent with damage of PSII reaction centers in nutrient‐starved cells. The relative abundance of the carboxylating enzyme, ribulose bisphosphate carboxylase/oxygenase (RUBISCO), decreased in response to nitrate and iron starvation but not phosphate starvation. Most marked was the decline in the abundance of the small subunit of RUBISCO in nitrate‐starved cells. The changes in pigment content and fluorescence characteristics were typically reversed within 24 h of resupply of the limiting nutrient.
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  • 123
    Publication Date: 2016-09-06
    Description: Local dynamics such as resource enhancement (e.g. nutrient supply) and stochastic events of destruction (disturbances that provide new space) are hypothesized to counteractively affect species diversity and composition.We tested the independent and interactive effects of nutrients and disturbance on the development of assemblages of epibiota attached to vertical surfaces in an oligotrophic system. Nutrient concentrations were manipulated at three levels (ambient, medium and high) while disturbance was manipulated by removing biomass at seven frequencies (0x, 2x, 3x, 4x, 5x, 7x, 12x). Nutrient and disturbance regimes had opposing effects on diversity such that species richness increased with resource enhancement (nutrients) and declined with disturbance. These results support the model that increased heterogeneity of distribution of limiting resources allows the coexistence of species with low and high resource requirements.
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  • 124
    Publication Date: 2019-09-13
    Description: The diversification of the teleost suborder Notothenioidei (Perciformes) in Antarctic waters provides one of the most striking examples of a marine adaptive radiation. Along with a number of adaptations to the cold environment, such as the evolution of antifreeze glycoproteins, notothenioids diversified into eight families and at least 130 species. Here, we investigate the genetic population structure of the humped rockcod (Gobionotothen gibberifrons), a benthic notothenioid fish. Six populations were sampled at different locations around the Scotia Sea, comprising a large part of the species’ distribution range (N = 165). Our analyses based on mitochondrial DNA sequence data (352 bp) and eight microsatellite markers reveal a lack of genetic structuring over large geographic distances (ΦST £ 0.058, FST £ 0.005, P values nonsignificant). In order to test whether this was due to passive larval dispersal, we used GPS-tracked drifter trajectories, which approximate movement of passive surface particles with ocean currents. The drifter data indicate that the Antarctic Circumpolar Current (ACC) connects the sampling locations in one direction only (west–east), and that passive transport is possible within the 4-month larval period of G. gibberifrons. Indeed, when applying the isolation-with-migration model in IMA, strong unidirectional west-east migration rates are detected in the humped rockcod. This leads us to conclude that, in G. gibberifrons, genetic differentiation is prevented by gene flow via larval dispersal with the ACC.
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  • 125
    Publication Date: 2017-02-23
    Description: The global decline of biodiversity caused by human domination of ecosystems worldwide is supposed to alter important process rates and state variables in these ecosystems. However, there is considerable debate on the prevalence and importance of biodiversity effects on ecosystem function (BDEF). Here, we argue that much of the debate stems from two major shortcomings. First, most studies do not directly link the traits leading to increased or decreased function to the traits needed for species coexistence and dominance. We argue that implementing a trait-based approach and broadening the perception of diversity to include trait dissimilarity or trait divergence will result in more realistic predictions on the consequences of altered biodiversity. Second, the empirical and theoretical studies do not reflect the complexity of natural ecosystems, which makes it difficult to transfer the results to natural situations of species loss. We review how different aspects of complexity (trophic structure, multifunctionality, spatial or temporal heterogeneity, and spatial population dynamics) alter our perception of BDEF. We propose future research avenues concisely testing whether acknowledging this complexity will strengthen the observed biodiversity effects. Finally, we propose that a major future task is to disentangle biodiversity effects on ecosystem function from direct changes in function due to human alterations of abiotic constraints.
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  • 126
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    Wiley
    In:  Global Change Biology, 14 . pp. 1199-1208.
    Publication Date: 2018-05-17
    Description: In this article, we show by mesocosm experiments that winter and spring warming will lead to substantial changes in the spring bloom of phytoplankton. The timing of the spring bloom shows only little response to warming as such, while light appears to play a more important role in its initiation. The daily light dose needed for the start of the phytoplankton spring bloom in our experiments agrees well with a recently published critical light intensity found in a field survey of the North Atlantic (around 1.3 mol photons m−2 day−1). Experimental temperature elevation had a strong effect on phytoplankton peak biomass (decreasing with temperature), mean cell size (decreasing with temperature) and on the share of microplankton diatoms (decreasing with temperature). All these changes will lead to poorer feeding conditions for copepod zooplankton and, thus, to a less efficient energy transfer from primary to fish production under a warmer climate.
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  • 127
    Publication Date: 2018-07-13
    Description: Crustal- and upper-mantle structures of the subduction zone in south central Chile, between 42 degrees S and 46 degrees S, are determined from seismic wide-angle reflection and refraction data, using the seismic ray tracing method to calculate minimum parameter models. Three profiles along differently aged segments of the subducting Nazca Plate were analysed in order to study subduction zone structure dependencies related to the age, that is, thermal state, of the incoming plate. The age of the oceanic crust at the trench ranges from 3 Ma on the southernmost profile, immediately north of the Chile triple junction, to 6.5 Ma old about 100 km to the north, and to 14.5 Ma old another 200 km further north, off the Island of Chiloe. Remarkable similarities appear in the structures of both the incoming as well as the overriding plate. The oceanic Nazca Plate is around 5 km thick, with a slightly increasing thickness northward, reflecting temperature changes at the time of crustal generation. The trench basin is about 2 km thick except in the south where the Chile Ridge is close to the deformation front and only a small, 800-m-thick trench infill could develop. In south central Chile, typically three quarters (1.5 km) of the trench sediments subduct below the decollement in the subduction channel. To the north and south of the study area, only about one quarter to one third of the sediments subducts, the rest is accreted above. Similarities in the overriding plate are the width of the active accretionary prism, 35-50 km, and a strong lateral crustal velocity gradient zone about 75-80 km landward from the deformation front, where landward upper-crustal velocities of over 5.0-5.4 km s〈SU-1〈/SU decrease seaward to around 4.5 km s〈SU-1〈/SU within about 10 km, which possibly represents a palaeo-backstop. This zone is also accompanied by strong intraplate seismicity. Differences in the subduction zone structures exist in the outer rise region, where the northern profile exhibits a clear bulge of uplifted oceanic lithosphere prior to subduction whereas the younger structures have a less developed outer rise. This plate bending is accompanied by strongly reduced rock velocities on the northern profile due to fracturing and possible hydration of the crust and upper mantle. The southern profiles do not exhibit such a strong alteration of the lithosphere, although this effect may be counteracted by plate cooling effects, which are reflected in increasing rock velocities away from the spreading centre. Overall there appears little influence of incoming plate age on the subduction zone structure which may explain why the M-w = 9.5 great Chile earthquake from 1960 ruptured through all these differing age segments. The rupture area, however, appears to coincide with a relatively thick subduction channel.
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  • 128
    Publication Date: 2017-09-26
    Description: Anaerobic oxidation of methane (AOM) in anoxic marine sediments is a significant process in the global methane cycle, yet little is known about the role of bulk composition, temperature and pressure on the overall energetics of this process. To better understand the biogeochemistry of AOM, we have calculated and compared the energetics of a number of candidate reactions that microorganisms catalyse during the anaerobic oxidation of methane in (i) a coastal lagoon (Cape Lookout Bight, USA), (ii) the deep Black Sea, and (iii) a deep-sea hydrothermal system (Guaymas basin, Gulf of California). Depending on the metabolic pathway and the environment considered, the amount of energy available to the microorganisms varies from 0 to 184 kJ mol−1. At each site, the reactions in which methane is either oxidized to inline image, acetate or formate are generally only favoured under a narrow range of pressure, temperature and solution composition – particularly under low (10−10 m) hydrogen concentrations. In contrast, the reactions involving sulfate reduction with H2, formate and acetate as electron donors are nearly always thermodynamically favoured. Furthermore, the energetics of ATP synthesis was quantified per mole of methane oxidized. Depending on depth, between 0.4 and 0.6 mol of ATP (mol CH4)−1 was produced in the Black Sea sediments. The largest potential productivity of 0.7 mol of ATP (mol CH4)−1 was calculated for Guaymas Basin, while the lowest values were predicted at Cape Lookout Bight. The approach used in this study leads to a better understanding of the environmental controls on the energetics of AOM.
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  • 129
    Publication Date: 2018-05-16
    Description: We present in situ biophysical measurements and bioassay experiments that demonstrate iron limitation of primary productivity during the spring bloom in the central North Atlantic. Mass balance calculations indicate that nitrate drawdown is iron (Fe)-limited and that aeolian Fe supply to this region cannot support maximal phytoplankton growth during the bloom. Using a simple simulation model, we show that relief of Fe limitation during the spring bloom can increase nitrate drawdown and, hence, new primary production, by 70%. We conclude that the episodic nature of iron supplied by dust deposition is an important factor controlling the dynamics of the spring bloom. From this, we hypothesize that variability in the timing and magnitude of the spring bloom in response to aeolian Fe supply will affect carbon drawdown and food web dynamics in the central North Atlantic
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  • 130
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    Wiley
    In:  Fisheries Oceanography, 2 (3-4). pp. 202-222.
    Publication Date: 2017-01-06
    Description: According to Sverdrup's (1953) model of the spring bloom, phytoplankton biomass decreases in winter when the mixed layer depth exceeds the critical depth. We have used a one-dimensional mathematical model integrated by the Lagrangian Ensemble method to simulate a population of diatoms during the winter between two growing seasons off the Azores. The model allows us to diagnose the demographic changes in the simulated diatom population from a variety of perspectives. The total population falls to a minimum of 70 million diatoms m-2 at the end of February. The vertical distribution of the population dynamics is first analysed in terms of daily Eulerian averages over 1 m depth intervals. Growth starts in February when the diurnal thermocline becomes shallower than 50 m, but while the mixed layer is still 200 m deep. The natural mortality has a minimum in winter because it is reduced (in the model) with temperature and population density. Eulerian analysis suggests that in winter, diatoms have a life expectancy of more than 3 months, so a significant number will survive the months of December, January and February when there is very little growth. Losses to grazing are negligible in winter. Lagrangian analysis shows how an individual diatom responds to its changing ambient environment caused by variation in depth (due to turbulent mixing) and the diurnal and seasonal changes in the photosynthetically active radiance. The different trajectories followed by the thousands of plankton particles simulated by the model produce diversity in growth rate ranging over several orders of magnitude, so care has to be taken in statistical analysis. The paper ends with a re-assessment of the value of the critical depth and compensation depth as predictors for onset of the spring bloom. The compensation depth was computed by Eulerian averaging over 1 m depth inter-vals each day. For 1 month after the vernal equinox the compensation depth follows the ascent of the mixed layer as it rises from a depth of 100 m to 40 m. Lagrangian analysis reveals that this is due to the photo-adaptation better matching the ambient irradiance experienced by diatoms in the mixed layer compared with those at the same depth in the seasonal thermo-cline. By mid-April the spring bloom has already ad-vanced so far that self shading influences the compensation depth, which then rises into the mixed layer. We conclude that Sverdrup's criterion is not useful for predicting changes in the diatom population simulated by our model.
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  • 131
    Publication Date: 2018-07-16
    Description: A bottom simulating reflector (BSR), which marks the base of the gas hydrate stability zone, has been detected for the first time in seismic data of the Black Sea. The survey area is in the northwestern Black Sea at 44°–45°N and 31.5°–32.5°E. In this paper, seismic wide-angle ocean bottom hydrophone (OBH) and ocean bottom seismometer (OBS) data are investigated with the goal to quantify the gas hydrate and free gas saturation in the sediment. An image of the subsurface is computed from wide-angle data by using Kirchhoff depth migration. The image shows the BSR at 205–270 m depth below the seafloor and six to eight discrete layer boundaries between the seafloor and the BSR. The top of the hydrate layer and the bottom of the gas layer cannot be identified by seismic reflection signals. An analysis of traveltimes and reflection amplitudes leads to 1-D P-wave velocity–depth and density–depth models. An average S-wave velocity of 160 m s−1 between the seafloor and the BSR is determined from the traveltime of the P to S converted wave. The normal incidence PP reflection coefficient at the BSR is −0.11, where the P-wave velocity decreases from 1840 to 1475 m s−1. Velocities and density are used to compute the porosity and the system bulk modulus as a function of depth. The Gassmann equation for porous media is used to derive explicit formulae for the gas hydrate and free gas saturation, which depend on porosity and on the bulk moduli of the dry and saturated sediment. A gas hydrate saturation–depth profile is obtained, which shows that there is 38 ± 10 per cent hydrate in the pore space at the BSR depth, where the porosity is 57 per cent (OBS 24). This value is derived for the case that the gas hydrate does not cement the sediment grains, a model that is supported by the low S-wave velocities. There is 0.9 or 0.1 per cent free gas in the sediment below the BSR, depending on the model for the gas distribution in the sediment. The free gas layer may be more than 100 m thick as a result of a zone of enhanced reflectivity, which can be identified in the subsurface image.
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  • 132
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    In:  Journal of Phycology, 41 (5). pp. 950-956.
    Publication Date: 2018-05-30
    Description: The influence of fluctuating light on diversity and species number of a natural phytoplankton assemblage competing for nutrients was investigated for 48 days under semicontinuous culture conditions. Light conditions were either changed periodically from high (65 μmol photons·m−2·s−1) to low intensity (15 μmol photons·m−2·s−1) at intervals of 1, 3, 6, and 12 days or fixed at constant light conditions of intermediate intensity (40 μmol photons·m−2·s−1). Fluctuating light at intervals of 1–12 days significantly affected phytoplankton diversity. The development of phytoplankton communities differed in treatments with different light regimes. In treatments with long light intervals, species abundance oscillated with the light phases. Differences in the temporal development of phytoplankton communities resulted in hump‐shaped relations between the interval length of the light phases and both species number and diversity index and can be explained by the intermediate disturbance hypothesis. Fluctuating light tends to sustain phytoplankton diversity under nutrient limitation if the light regime changes in the order of several days. This indicates that temporal changes in weather regime are important in preventing competitive exclusion of phytoplankton species in nature.
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  • 133
    Publication Date: 2018-05-17
    Description: In marine ecosystems, pelagic copepods, chaetognaths and jellyfish play a key role in matter and energy flow. While copepods support most food webs and the biological pump of carbon into the deep ocean, chaetognaths and jellyfish may affect the strength of the top‐down control upon plankton communities. In this study, we show that the main events in the long‐term variability of these functional groups in the Northwestern Mediterranean were tightly linked to changes of climate forcing of the North Atlantic sector. Large‐scale climate forcing has altered the pelagic food‐web dynamics through changes in biological interactions, competition and predation, leading to substantial changes manifested as bursts or collapses in zooplankton populations, and consequently to a major change ca. 1987. These events become more frequent in the 1980s and the early 1990s in the studied zooplankton functional groups suggesting a shift in the functioning of the pelagic ecosystem. The environmental modifications and the results reported here are therefore, indicators of a regime change pointing to a more regeneration‐dominated system in the study area. We suggest a chain of mechanisms, whereby climate variation has modified the long‐term dynamics of pelagic copepods, chaetognaths and jellyfish in the Ligurian Sea.
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  • 134
    Publication Date: 2019-09-23
    Description: Laboratory and numerical experiments and boundary layer analysis of the entrainment of buoyant asthenosphere by subducting oceanic lithosphere implies that slab entrainment is likely to be relatively inefficient at removing a buoyant and lower viscosity asthenosphere layer. Asthenosphere would instead be mostly removed by accretion into and eventual subduction of the overlying oceanic lithosphere. The lower (hot) side of a subducting slab entrains by the formation of a ∼10–30 km-thick downdragged layer, whose thickness depends upon the subduction rate and the density contrast and viscosity of the asthenosphere, while the upper (cold) side of the slab may entrain as much by thermal 'freezing' onto the slab as by mechanical downdragging. This analysis also implies that proper treatment of slab entrainment in future numerical mantle flow experiments will require the resolution of ∼10–30 km-thick entrainment boundary layers.
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  • 135
    Publication Date: 2019-09-23
    Description: The local distribution of the bacterial community associated with the marine sponge Tethya aurantium Pallas 1766 was studied. Distinct bacterial communities were found to inhabit the endosome and cortex. Clear differences in the associated bacterial populations were demonstrated by denaturing gradient gel electrophoresis (DGGE) and analysis of 16S rRNA gene clone libraries. Specifically associated phylotypes were identified for both regions: a new phylotype of Flexibacteria was recovered only from the sponge cortex, while Synechococcus species were present mainly in the sponge endosome. Light conduction via radiate spicule bundles conceivably facilitates the unusual association of Cyanobacteria with the sponge endosome. Furthermore, a new monophyletic cluster of sponge-derived 16S rRNA gene sequences related to the Betaproteobacteria was identified using analysis of 16S rRNA gene clone libraries. Members of this cluster were specifically associated with both cortex and endosome of T. aurantium.
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  • 136
    Publication Date: 2020-07-24
    Description: We are investigating effects of the depsipeptide geodiamolide H, isolated from the Brazilian sponge Geodia corticostylifera, on cancer cell lines grown in 3D environment. As shown previously geodiamolide H disrupts actin cytoskeleton in both sea urchin eggs and breast cancer cell monolayers. We used a normal mammary epithelial cell line MCF 10A that in 3D assay results formation of polarized spheroids. We also used cell lines derived from breast tumors with different degrees of differentiation: MCF7 positive for estrogen receptor and the Hs578T, negative for hormone receptors. Cells were placed on top of Matrigel. Spheroids obtained from these cultures were treated with geodiamolide H. Control and treated samples were analyzed by light and confocal microscopy. Geodiamolide H dramatically affected the poorly differentiated and aggressive Hs578T cell line. The peptide reverted Hs578T malignant phenotype to polarized spheroid-like structures. MCF7 cells treated by geodiamolide H exhibited polarization compared to controls. Geodiamolide H induced striking phenotypic modifications in Hs578T cell line and disruption of actin cytoskeleton. We investigated effects of geodiamolide H on migration and invasion of Hs578T cells. Time-lapse microscopy showed that the peptide inhibited migration of these cells in a dose-dependent manner. Furthermore invasion assays revealed that geodiamolide H induced a 30% decrease on invasive behavior of Hs578T cells. Our results suggest that geodiamolide H inhibits migration and invasion of Hs578T cells probably through modifications in actin cytoskeleton. The fact that normal cell lines were not affected by treatment with geodiamolide H stimulates new studies towards therapeutic use for this peptide.
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  • 137
    Publication Date: 2016-06-27
    Description: The population density of brown trout (Salmo trutta) in a small natural system was manipulated in six equal-length stream sections by stocking hatchery-reared 1+ brown trout (unstocked, tripled and quintupled) over two consecutive years. The results showed that hatchery-reared trout grew more slowly and were more mobile than resident trout, and that their growth was inversely density dependent. In contrast, growth of the resident trout was density independent. The recapture of 1+ resident and hatchery-reared trout was inversely density dependent. This is most likely a consequence of increased competition. However, after a single winter the population density returned to its base level prior stocking and older resident trout showed no density-dependent recapture. Thus, the advantage of stocking, here higher biomass, may have the detrimental effect of decreasing resident stocks of the same size class during summer.
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  • 138
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    Wiley
    In:  Boreas, 19 (2). pp. 119-125.
    Publication Date: 2016-07-25
    Description: Planktic foraminiferal assemblages were studied qualitatively and quantitatively in 13 samples obtained at 3 cm intervals throughout the uppermost Pleistocene-Holocene deposits of Box core 123 (Eurydice Expedition, western equatorial Pacific Ocean). Absolute ages of these samples have previously been determined by the 14C method; the lowest sample dated from approximately 16,000 B.P. A curve based on the ratio between specimens of warm and warm-temperate vs. cold and cold-temperate water assemblages suggests that two temperature drops occurred during this time-span: at 11,OOO B.P. and around 4,000–2,OOO B.P. The former drop corresponds to the onset of the Younger Dryas cooling. An unexpectedly high dominance of Globigerinita clarkei (up to 60%, on the average 48.5%) was observed throughout the entire core. Isolated, small-sized and poorly developed specimens of typical cold water foraminifera were present in the materials investigated; their origin is most probably due to advection via equatorward subsurface currents.
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  • 139
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    In:  Boreas, 20 (2). pp. 151-154.
    Publication Date: 2016-09-02
    Description: Because many forminiferologists pay little attention to the smallest planktic foraminiferal species, the role of Globigerinita clarkei (Rögl & Bolli) as a fauna making species has been largely overlooked. Although it is widely distributed throughout the world, even dominating the assemblages of many areas (at least in the Quarternarty deposits), it is missing from numerous reports based on materials where it must have been present.
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  • 140
    Publication Date: 2020-06-15
    Description: This paper presents a three‐dimensional (3D) seismic analysis of sediment remobilization and fluid migration in a 2000‐km2 area above the Gjallar Ridge located in the Vøring Basin, offshore Norway. Three distinct types of mounded structures have been identified as resulting from focused fluid/gas migration and associated mud remobilization and intrusion. Type A structures are gently mounded, and we infer that these structures formed because of in situ remobilization of Middle Eocene to Lower–Middle Oligocene fine‐grained sediments in response to fluid and minor sediment injection via deep‐seated normal faults. Type B structures comprise relatively steep‐sided mounds and are restricted to the pre‐Miocene interval. They are often located above narrow zones of discontinuous low‐amplitude reflections resembling gas chimneys. Some of the Type B structures are associated with stacked amplitude anomalies and possible mud volcanoes at the base Pleistocene indicating their long‐term significance as vertical fluid conduits. Type C structures comprise discrete mound features that seem to jack up the Top Palaeocene (Top Brygge) horizon. These are similar to hydrothermal mounds found elsewhere on the Norwegian Margin and associated with igneous sill intrusion during North Atlantic breakup. This study highlights the utility of 3D seismic data for mapping of fluid and sediment mobilization through time over large basinal areas.
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  • 141
    Publication Date: 2020-07-31
    Description: The use of filamentous Rhizopus for lactic acid production is facing a challenge due to its low yield mainly caused by the difficulty to control its morphology in submerged fermentation processes. This study was aimed at investigating the impacts of cultivation parameters on the morphology of Rhizopus arrhizus DAR 36017 and lactic acid production using waste potato starch in a laboratory scale bubble column reactor (BCR). The fungal morphology was significantly influenced by carbon sources, process pH, starch concentrations, sparger designs and aeration rates. The favorable morphology for lactic acid production was a freely dispersed small pellet, which was achieved under operation conditions at pH 5.0–6.0, starch concentrations of 60–120 g/L and aeration rates of 0.2–0.8 vvm using a sintered stainless steel disc sparger. Optimal cultivation conditions at pH 6.0 and an aeration rate of 0.4 vvm resulted in the formation of freely dispersed small pellets and 103.8 g/L lactic acid with a yield of 87 % from 120 g/L liquefied potato starch in 48 h. The overall results in terms of lactic acid yield and productivity are comparable to those reported in previous studies using immobilized Rhizopus cells in batch fermentations.
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  • 142
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    In:  Journal of Proteome Research, 6 (2). pp. 540-545.
    Publication Date: 2020-07-20
    Description: Metabolomics offers great potential for understanding the metabolic consequences of exposure to chemicals and other stressors in the environment. Biological systems encompass humans exposed to chemicals in the environment as well as the diverse organisms inhabiting an ecosystem and exposed to environmental contaminants. An overall goal of environmental metabolomics is to understand what is metabolomically “normal” or adaptive and what constitutes a threat to human health and the environment.
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  • 143
    Publication Date: 2020-07-31
    Description: Preexisting developmental plasticity in feeding larvae may contribute to the evolutionary transition from development with a feeding larva to nonfeeding larval development. Differences in timing of development of larval and juvenile structures (heterochronic shifts) and differences in the size of the larval body (shifts in allocation) were produced in sea urchin larvae exposed to different amounts of food in the laboratory and in the field. The changes in larval form in response to food appear to be adaptive, with increased allocation of growth to the larval apparatus for catching food when food is scarce and earlier allocation to juvenile structures when food is abundant. This phenotypic plasticity among full siblings is similar in direction to the heterochronic evolutionary changes in species that have greater nutrient reserves within the ova and do not depend on particulate planktonic food. This similarity suggests that developmental plasticity that is adaptive for feeding larvae also contributes to correlated and adaptive evolutionary changes in the transition to nonfeeding larval development. If endogenous food supplies have the same effect on morphogenesis as exogenous food supplies, then changes in genes that act during oogenesis to affect nutrient stores may be sufficient to produce correlated adaptive changes in larval development.
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  • 144
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    In:  Journal of Fish Biology, 17 (4). pp. 411-429.
    Publication Date: 2018-05-16
    Description: Methods for analysing fish stomach contents are listed and critically assessed with a view to their suitability for determining dietary importance—this term is defined. Difficulties in the application of these methods are discussed and, where appropriate, alternative approaches proposed. Modifications which have practical value are also considered. The necessity of linking measurements of dietary importance to stomach capacity is emphasized and the effects of differential digestion upon interpretation of stomach contents outlined. The best measure of dietary importance is proposed as one where both the amount and bulk of a food category are recorded.
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  • 145
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    Wiley
    In:  Boreas, 2 (2). pp. 55-68.
    Publication Date: 2016-11-15
    Description: Six cores were selected from 46 collected in the SW part of the Atlantic Ocean to compare the three main methods of constructing Pleistocene paleoclimatic curves by means of planktic Foraminifera. It was found that the method based on a study of the whole fauna yields more details and represents the degree of the relative climatic changes better, whereas the method based on the ratio between the Globorotalia menardii complex and G. inflata exagerates the large scale temperature oscillations. However, this exaggeration makes the separation of glacial, interglacial, and interstadial epochs much easier. Paleoclimatic curves based on the sinistral: dextral ratio of Globorotalia truncatulinoides do not coinicde with those prepared utilizing the two previous methods. thus, the coiling direction of Globorotalia truncatulinoides cannot be utilized as a paleoclimatic criterion.
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  • 146
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    Wiley
    In:  Ecology of Freshwater Fish, 17 (3). pp. 455-464.
    Publication Date: 2016-08-30
    Description: The population density of brown trout (Salmo tnttta) in a small natural system was manipulated in six equal-length stream sections by stocking hatchery-reared 1 + brown traut (unstocked, tripled and quintupled) over two consecutive years. The results showed that hatchery~reared trout grew more slowly and were more mobile than resident trout, and that their growth was inversely density dependent. In contrast, growth of the resident traut was density independent. The · recapture of 1 + resident and hatchery-reared traut was inve_rsely density dependent. This is most lilcely a consequence of increased competition. However, after a single winter the population density retumed to its base Ievel prior stocking and older resident traut showed no densitydependent recapture. Thus, the advantage of stocking, here higher biomass, may have the detrirnental effect of decreasing resident stocks of the same size class during summer.
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  • 147
    Publication Date: 2016-07-26
    Description: Dinoflagellate cysts and other palynomorphs were studied from ODP Hole 1002C in the Cariaco Basin over the past 30 000 years. The assemblage shifts between a dominance of heterotrophic dinoflagellate cysts (mainly Brigantedinium spp., Lejeunecysta spp., Selenopemphix nephroides and Stelladinium reidii) and autotrophic dinoflagellate cysts (mainly Spiniferites ramosus, Lingulodinium machaerophorum and Operculodinium centrocarpum). These assemblage shifts are associated with stronger upwelling during stadials and stronger river influx during interstadials. Increases in productivity caused by enhanced upwelling are coupled to improved preservation and vice versa. More stratified water is indicated by higher abundances of L. machaerophorum and succeeds Heinrich events. The average process length of L. machaerophorum can be used to track changes in salinity, since this shows a similar pattern as the δ18OSW (paired Mg/Ca −δ18O) reconstruction. During the last glacial, conditions were more saline than during the current interglacial. On a millennial scale, changes in salinity are opposite to open ocean salinities and the hydrological proxies, which can be explained by a modulation of the signal by stratification, isolation of the Basin or advection of freshwater masses. These results highlight both generalities and particularities of the palaeoecological record of this tropical semi-enclosed basin.
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  • 148
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    In:  Biotechnology Journal, 3 (4). pp. 496-509.
    Publication Date: 2020-06-22
    Description: The genomes of most economically important microbial cells are already sequenced and proteomic technologies can be applied during various process development steps, starting with the selection and optimization of the functions of the industrial strains, application of the knowledge of cell function in response to the changes of production parameters, validation of the downstream processing, and thorough characterization of the final product. Unfortunately, there are only a few direct examples in the literature that present the optimization of the production process based on proteomics. In this review, we discuss the potential of this technology for the design of future bioprocesses and for optimization of existing ones.
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  • 149
    Publication Date: 2016-09-05
    Description: At the western continental margin of the Barents Sea, 75°N, hemipelagic sediments provide a record of Holocene climate change with a time resolution of 10–70 years. Planktic foraminifera counts reveal a very early Holocene thermal optimum 10.7–7.7 kyr BP, with summer sea surface temperatures (SST) of 8°C and a much enhanced West Spitsbergen Current. There was a short cooling between 8.8 and 8.2 kyr BP. In the middle and late Holocene summer, SST dropped to 2.5°-5.0°C, indicative of reduced Atlantic heat advection, except for two short warmings near 2.2 and 1.6 kyr BP. Distinct quasi-periodic spikes of coarse sediment fraction (with large portions of lithic grains, benthic and planktic foraminifera) record cascades of cold, dense winter water down the continental slope as a result of enhanced seasonal sea ice formation and storminess on the Barents shelf over the entire Holocene. The spikes primarily cluster near recurrence intervals of 400–650 and 1000–1350 years, when traced over the entire Holocene, but follow significant 885–/840– and 505–/605-year periodicities in the early Holocene. These non-stationary periodicities mimic the Greenland-10Be variability, which is a tracer of solar forcing. Further significant Holocene periodicities of 230, (145) and 93 years come close to the deVries and Gleissberg solar cycles.
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  • 150
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    Wiley
    In:  Biological Journal of the Linnean Society, 14 (1). pp. 103-131.
    Publication Date: 2016-09-09
    Description: At the sub-Antarctic island of South Georgia 25 of the 29 breeding species are seabirds. Fifteen of these have recently been studied in some detail. By examining the timing of their breeding seasons and their diet and feeding ecology (especially feeding techniques and potential foraging ranges), the nature of their ecological isolating mechanisms, and in particular the way in which they partition the resources of the marine environment, are reviewed. Although breeding season adaptations occur (winter breeding in Wandering Albatross and King Penguin; out of phase breeding in two species-pairs of small petrels) these are less important than dillerences in food and feeding ecology. There is a fundamental distinction between the niche of pursuit-diving species (mainly penguins) and the remainder which are basically surface-feeders. The two abundant krill-eating penguins show clear differences in feeding zones. Three albatrosses and a petrel feed mainly on squid and there are differences in both the species and size of the prey of each. The remaining seabirds chiefly take krill (although the giant petrels are extensive scavengers and some smaller petrels specialize on copepods) and utilize different feeding methods and areas to do so. Various adaptations related to inshore and offshore feeding zones are discussed. Although most species possess a combination of ecological isolating mechanisms additional evidence for the particular importance of dietary differences is presented.
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  • 151
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    Wiley
    In:  In: The oceanic lithosphere. , ed. by Emiliani, C. The Sea, 7 . Wiley, New York, pp. 1618-1684. ISBN 0-471-02870-3
    Publication Date: 2018-02-07
    Type: Book chapter , NonPeerReviewed
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  • 152
    Publication Date: 2018-05-30
    Description: Herbivory is particularly intense in tropical benthic communities, suggesting preference of constitutive, rather than inducible, anti-herbivory defense. The objective of the study was to examine whether anti-herbivore defenses in the red alga Hypnea pannosa J. Agardh and the brown algae Sargassum asperifolium Hering and G. Martens ex J. Agardh and Cystoseira myrica (S.G. Gmelin) C. Agardh could be induced and subsequently reduced in response to grazing by the amphipod Cymadusa filosa Savigny. During a 14-day treatment phase, algae were exposed to amphipod grazing or were left ungrazed (control). Subsequently, one subset of algae was used in feeding assays, whereas another was cultivated for additional 14 days without consumers (recovery phase). At the end of each phase, bioassays were conducted to detect defensive traits in terms of differences in consumption rates of grazed and control pieces of live algae and agar-based food containing nonpolar algal extracts. Consumption of grazed live S. asperifolium and H. pannosa specimens was lower than of control algae. Furthermore, nonpolar extracts of grazed S. asperifolium and C. myrica were less preferred than those from control algae. Defensive responses were exclusively detected after the treatment phase, although strong preference of ungrazed H. pannosa and C. myrica over grazed conspecifics continued throughout the recovery phase. These findings suggest that phenotypic plasticity in anti-herbivory defense of marine macroalgae 1) might be more common than previously shown, 2) could be switched on and off within 2 weeks, and 3) can be found in nonpolar algal extracts.
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  • 153
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    In:  Annual Review of Fluid Mechanics, 26 (1). pp. 617-659.
    Publication Date: 2020-06-09
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  • 154
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    In:  Holarctic Ecology, 7 (3). pp. 257-261.
    Publication Date: 2017-01-18
    Description: A population dynamics analysis for planktonic diatoms is presented that allows estimates of the net rate of increase (k), the death rate (δ), the sedimentation rate (σ) and, in absence of grazing, the growth rate (μ). It requires counts of live and dead cells suspended in the euphotic part of the water column and accumulated in sedimentation traps. The application of the model is demonstrated for the three dominant summe diatom species in Lake Constance. Asterionella formosa Hass, Fragilaria crotonensis Kitton and Stephanodiscus binderanus Krieger. Only during the first two weeks of the summer bloom of diatoms the loss rates were unimportant in comparison to the growth rates. Thereafter diatom population dynamics was strongly influenced by sedimentation and mortality, which sometimes led to a decrease in population density even when cell division continued at high rates. There were two periods of extraordinarily high death rates, which were associated in the case of A. formosa with silicon depletion and in the case of F crotensis with fungal parasitism.
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  • 155
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    In:  Journal of Experimental Zoology Part B: Molecular and Developmental Evolution, 306B (3). pp. 204-215.
    Publication Date: 2017-07-11
    Description: The dentition of osteichthyans presents an astonishing diversity with regard to the distribution of teeth in the oral cavity, tooth numbers, arrangements, shapes, and sizes. Taking examples from three unrelated teleosts—the most speciose group of osteichthyans—and from the literature, this study explores how the initial tooth pattern is set up, and how this relates to the establishment and maintenance (or modification) of the tooth replacement pattern. In teleosts, first-generation teeth (the very first teeth in ontogeny to develop at a particular locus) are commonly initiated in adjacent or in alternate (odd and even) positions. The mechanisms responsible for these divergent developmental patterns remain to be elucidated, in particular, whether they reflect a field or local type of control. However, patterns of adjacent or alternate tooth initiation, set up by the first-generation teeth, can easily turn into replacement patterns where new teeth are initiated simultaneously every second, or even every third position, by synchronizing the formation of new first-generation teeth to the formation of replacement teeth at older loci. Our observations suggest that, once established, the replacement pattern appears to be maintained, as a kind of “default” state. Variations and modifications in this pattern are nevertheless common and suggest that tooth replacement is under local control, exerted at the level of the initiation of replacement teeth. Further studies are needed to test the hypothesis that regular replacement patterns are more frequent in association with the plesiomorphic condition of extramedullary replacement (replacement on the surface of the dentigerous bone) and more rare in the derived condition of intramedullary replacement (replacement within the medullary cavity of the dentigerous bone)
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  • 156
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    In:  Journal of Applied Ichthyology, 22 . pp. 241-253.
    Publication Date: 2017-07-03
    Description: This study presents a historical review, a meta-analysis, and recommendations for users about weight–length relationships, condition factors and relative weight equations. The historical review traces the developments of the respective concepts. The meta-analysis explores 3929 weight–length relationships of the type W = aLb for 1773 species of fishes. It shows that 82% of the variance in a plot of log a over b can be explained by allometric versus isometric growth patterns and by different body shapes of the respective species. Across species median b = 3.03 is significantly larger than 3.0, thus indicating a tendency towards slightly positive-allometric growth (increase in relative body thickness or plumpness) in most fishes. The expected range of 2.5 〈 b 〈 3.5 is confirmed. Mean estimates of b outside this range are often based on only one or two weight–length relationships per species. However, true cases of strong allometric growth do exist and three examples are given. Within species, a plot of log a vs b can be used to detect outliers in weight–length relationships. An equation to calculate mean condition factors from weight–length relationships is given as Kmean = 100aLb−3. Relative weight Wrm = 100W/(amLbm) can be used for comparing the condition of individuals across populations, where am is the geometric mean of a and bm is the mean of b across all available weight–length relationships for a given species. Twelve recommendations for proper use and presentation of weight–length relationships, condition factors and relative weight are given.
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  • 157
    Publication Date: 2019-01-23
    Description: Summary: • Glomus intraradices is a widespread arbuscular mycorrhizal fungus (AMF), which has been found in an extremely broad range of habitats, indicating a high tolerance for environmental factors and a generalist life history strategy. Despite this ecological versatility, not much is known about the genetic diversity of this fungal species across different habitats or over large geographic scales. • A nested polymerase chain reaction (PCR) approach for the mitochondrial rRNA large subunit gene (mtLSU), distinguished different haplotypes among cultivated isolates of G. intraradices and within mycorrhizal root samples from the field. • From analysis of 16 isolates of this species originating from five continents, 12 mitochondrial haplotypes were distinguished. Five additional mtLSU haplotypes were detected in field‐collected mycorrhizal roots. Some introns in the mtLSU region appear to be stable over years of cultivation and are ancestral to the G. intraradices clade. • Genetic diversity within G. intraradices is substantially higher than previously thought, although some mtLSU haplotypes are widespread. A restriction fragment length polymorphism approach also was developed to distinguish mtLSU haplotypes without sequencing. Using this molecular tool, intraspecific genetic variation of an AMF species can be studied directly in field plants.
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  • 158
    Publication Date: 2018-05-17
    Description: Future levels in ultraviolet-B (UVB) radiation are expected to increase directly due to stratospheric ozone depletion and under water indirectly by, for example, global warming effects on DOC concentrations, altered trophic interactions in the plankton, or reduced eutrophication. While detrimental UV effects have been reported at the cellular level, little to nothing is known about community-wide effects of ambient and future UVB radiation. In a 4-month field experiment, the ambient UV regime was (i) reduced by cut-off filters which removed either UVB or total UV from the solar spectrum or (ii) increased to predicted future levels by UVB lamps. To allow relating the effects of present and future UV regimes to another important ecological control of community structure and diversity in subtidal marine habitats, consumer effects were quantified by an exclusion treatment under ambient light regimes. Ambient UV regimes did not affect community structure, biomass accrual, and diversity. In contrast, under enhanced UVB levels, the dominance of the competitively superior blue mussels increased and species richness and biomass accrual decreased. Species composition of the assemblages differed between the two UV regimes. Effects of enhanced UVB radiation and of consumption on biomass accrual, diversity, and structure of the community were comparable in magnitude and timing, but of opposite direction. In contrast, the effects of enhanced UVB radiation on growth and abundance of mussels were in the same direction, but shorter and weaker than consumer effects. Most UV effects were transitory and vanished within the first 2 months of succession. Our results indicate that present and future UVB levels may be of limited importance and not stronger in effect size than other ecological controls in structuring the shallow-water low-diversity macrobenthic communities in temperate regions.
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  • 159
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    In:  Geophysical Journal International, 172 . pp. 240-251.
    Publication Date: 2019-09-23
    Description: Trench-outer rise earthquakes occur by reactivation or creation of normal faults caused as the oceanic lithosphere approaches a subduction zone and bends into the deep-sea trench. These faults may cut deep enough into the mantle to allow sea water to penetrate into the lithosphere, causing serpentinization. The amount of water carried into the mantle is linked to the maximum depth that the tensional faults cut into the lithosphere, which in turn is directly linked to the maximum focal depths of outer rise normal faulting earthquakes. We analysed teleseismic P and S waves of seven earthquakes from the trench-outer rise offshore of Central America using teleseismic waveform inversion of broad-band data. For the computation of Green's functions for waveform inversion, probabilistic earthquake locations were calculated. To study the rupture process, earthquake centroid depths and focal mechanisms for a sequence of subevents were calculated. Both, hypocentral depths from the relocation process and the estimated centroid depths from the waveform inversion show that all events occur at shallow depths (〈30 km). Furthermore, the locations of the subevents relative to each other suggest that fault planes for Mw∼ 6 are in the order of 50 km in length and only 5–10 km in width. Rupture generally propagates downdip and the focal mechanisms change for most events from normal faulting to strike-slip or oblique thrusting with time. The depth at which this mechanism change is observed may represent the depth of the nodal plane between tensional and compressional regions in the incoming plate.
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  • 160
    Publication Date: 2019-09-23
    Description: River discharge of Ob and Yenisei to the Kara Sea is highly variable on seasonal and interannual time scales. River water dominates the shallow bottom water near the river mouths, making it warmer and less saline but seasonally and interannually more changeable than bottom water on the deeper shelf. This hydrographic pattern shows up in measurements and modelling, and in stable isotope records (δ18 O, δ13 C) along the growth axis of bivalve shells and in multiple analyses of single benthic foraminiferal shells. Average isotope ratios increase, but sample-internal variability decreases with water depth and distance from river mouths. However, isotope records of bivalves and foraminifera of a sediment core from a former submarine channel of Yenisei River reveal a different pattern. The retreat of the river mouth from this site due to early Holocene sea level rise led to increasing average isotope values up core, but not to the expected decrease of the in-sample isotope variability. Southward advection of cold saline water along the palaeo-river channel probably obscured the hydrographic variability during the early Holocene. Later, when sediment filled the channel, the hydrographic variability at the core location remained low, because the shallowing proceeded synchronously with the retreat of the river mouth.
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  • 161
    Publication Date: 2019-02-27
    Description: A high-performance liquid chromatographic method was developed for the simultaneous determination and pharmacokinetic studies of safflor yellow A, puerarin, 3′-methoxyl-puerarin, and puerarinapioside in the plasma and tissues of rats that had been administered with the traditional Chinese medicine (TCM) preparation Naodesheng via the caudal vein. Samples taken from rats were subjected to protein precipitation with acetone. Separation of these four compounds was accomplished on a Kromisil C18 stationary phase using a mobile phase of acetonitrile–0.1% phosphoric acid–tetrahydrofuran (8:92:2, v/v/v) at a flow-rate of 1.0 mL/min. The detection wavelength was set at 250 nm. The calibration curves of the four components were linear in the given concentration ranges. The intra- and inter-day precisions in plasma and tissues were less than 15% and the extraction recoveries were higher than 60%. The lower limits of quantitation of four components were low enough to determine the four components. These four components all exhibited kinetics that fitted a two-compartment model in rats. The elimination half-life was 1.19 h for safflor yellow A, 2.69 h for puerarin, 2.94 h for 3′-methoxyl-puerarin, and 0.87 h for puerarinapioside, respectively. Following administration of a single injection of Naodesheng, the concentration (C) of the four components in the tissues showed Ckidney 〉 Clung, Cliver 〉 Cspleen, Cstomach, Cheart, approximately. The method is a reliable tool for performing studies of safflor yellow A and three puerarin isoflavones in different biological material
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  • 162
    Publication Date: 2016-12-19
    Description: Phloem-mobile signals play a major role in plant nutrition, development and communication. In the latter context, phloem-mobile RNAs have been associated with signalling between plant tissues. In this study, we focused on the identification of transcripts in the shoot phloem of the model plant Arabidopsis thaliana. To isolate transcripts expressed in phloem parenchyma cells and in companion cell–sieve element complexes, we used laser microdissection coupled to laser pressure catapulting (LMPC). Mobile transcripts in sieve elements were isolated from leaf phloem exudates. After optimization of sampling and fixation, RNA of high quality was isolated from both sources. The modifications to the RNA amplification procedure described here were well suited to production of RNA of sufficient yield and quality for microarray experiments. Microarrays hybridized with LMPC-derived phloem tissue or phloem sap RNA allowed differentiation between phloem-expressed and mobile transcript species. Using this set of phloem transcripts and comparing them with microarrays derived from databases of light, hormone and nutrient treatment experiments, we identified phloem-derived RNAs as mobile, potential long-distance signals. Our dataset thus provides a search criterion for phloem-based signals hidden in the complex datasets of microarray experiments. The availability of these comprehensive phloem transcript profiles will facilitate reverse-genetic studies and forward-genetic screens for phloem and longdistance RNA signalling mutants.
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  • 163
    Publication Date: 2017-10-24
    Description: The behaviour of a series of hydroxamate siderophores - microbially produced iron complexes - was investigated using electrospray ionisation mass spectrometry (ESI-MS). Three groups of iron hydroxamate siderophores, namely the ferrioxamines, ferrichromes and coprogens/ fusigens, were separated by high-performance liquid chromatography (HPLC) prior to ESI and MS2 fragmentation. For the majority of the siderophores, both protonated molecules and sodium adducts were observed. The most abundant ion was selected for collision-induced fragmentation. Potential fragmentation mechanisms are postulated and discussed. Fragmentation patterns differed between siderophore groups; however, common fragmentation patterns were observed for siderophore ions within the groups examined. Cleavage frequently occurred at carbon-nitrogen or carbon-oxygen bonds. Fragmentation of the ions also involved cleavage of iron-oxygen bonds and transfer of the charge to iron.
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  • 164
    Publication Date: 2020-07-20
    Description: Phytoplankton deal with metal toxicity using a variety of biochemical strategies. One of the strategies involves glutathione (GSH) and phytochelatins (PCs), which are metal-binding thiol peptides produced by eukaryotes and these compounds have been related to several intracellular functions, including metal detoxification, homeostasis, metal resistance and protection against oxidative stress. This paper assesses our state of knowledge on the production of PCs and GSH by marine phytoplankton in laboratory and field conditions and the possible applications of PCs for environmental purposes. Good relationships have been observed between metal exposure and PC production in phytoplankton in the laboratory with Cd, Pb, and Zn showing the greatest efficacy, thereby indicating that PCs have a potential for application as a biomarker. Fewer studies on PC distributions in particulate material have been undertaken in the field. These studies show that free Cu has a strong relationship with the levels of PC in the particulate material. The reason for this could be because Cu is a common contaminant in coastal waters. However it could also be due to the lack of measurements of other metals and their speciation. GSH shows a more complex relationship to metal levels both in the laboratory and in the field. This is most likely due to its multifunctionality. However, there is evidence that phytoplankton act as an important source of dissolved GSH in marine waters, which may form part of the strong organic ligands that control metal speciation, and hence metal toxicity. © 2006 by the Phycological Society of America.
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  • 165
    Publication Date: 2020-07-21
    Description: Anthecularin (1), a minor sesquiterpene lactone with a novel ring system was isolated from Greek Anthemis auriculata (Asteraceae). Its structure was elucidated by means of NMR, HRMS, and X-ray crystallography. Anthecularin showed antitrypanosomal (IC50 = 10.1 μg/mL) and antiplasmodial activity (IC50 = 23.3 μg/mL) and inhibited two key enzymes of the plasmodial type II fatty acid biosynthesis pathway, PfFabI and PfFabG (IC50 values = 14 and 28.3 μg/mL, respectively). A probable biogenesis of 1 is also proposed and discussed.
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  • 166
    Publication Date: 2014-08-21
    Description: Baibutoside (5), a new cycloartane-type triterpene glycoside, has been isolated from the roots of Astragalus baibutensis along with four known glycosides, acetylastragaloside I (1), and astragalosides I, II, and IV (2–4, resp.). The structure elucidation of the compounds were achieved by a combination of one- and two-dimensional NMR techniques (DQF-COSY, HSQC, HMBC, and ROESY), and mass spectrometry (ESI-MS), where all the compounds were shown to have cycloastragenol (=(20R,24S)-3β,6α,16β,25-tetrahydroxy-20,24-epoxy-9,19-cyclolanostane) as aglycone. All compounds were tested for in vitro antiprotozoal activity. Compounds 1–4 displayed notable activity vs. Trypanosoma brucei rhodesiense, with acetylastragaloside I (1) being the most potent (IC50 9.5 μg/ml). Acetylastragaloside I (1) was also lethal to T. cruzi (IC50 5.0 μg/ml), and it is the first cycloartane-type triterpene with remarkable trypanocidal activity against both T. brucei rhodesiense and T. cruzi. However, it exhibits some cytotoxicity on mammalian cells.
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  • 167
    Publication Date: 2014-08-21
    Description: Primin (=2-methoxy-6-pentylcyclohexa-2,5-diene-1,4-dione), a natural benzoquinone synthesized in our laboratory, was investigated for its in vitro antiprotozoal, antimycobacterial, and cytotoxic potential. Primin showed very potent activity against Trypanosoma brucei rhodesiense (IC50 0.144 μM) and Leishmania donovani (IC50 0.711 μM), and revealed low cytotoxicity (IC50 15.4 μM) on mammalian cells. Only moderate inhibitory activity was observed against Mycobacterium tuberculosis, Trypanosoma cruzi, and Plasmodium falciparum. When tested for in vivo efficacy in a Trypanosoma b. brucei rodent model, primin failed to cure the infection at 20 mg/kg given intraperitoneally. Primin was too toxic in vivo at a higher concentration (30 mg/kg, injected i.p. route) in mice infected with L. donovani. Taken together, primin can serve as a lead compound for the rational design of more potent and less toxic antiprotozoal agents.
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  • 168
    Publication Date: 2014-08-20
    Description: A total of 58 extracts of different polarity were prepared from various organs of 16 species of Turkish plants and screened for their antitrypanosomal, antileishmanial and antiplasmodial activities. No significant activity was observed against Trypanosoma cruzi, whereas many extracts showed appreciable trypanocidal potential against T. brucei rhodesiense, with the CHCl3-soluble portion of Phlomis kurdica being the most active (IC50 2.7 µg[sol ]mL). Almost all extracts, particularly the CHCl3 phases, exhibited growth inhibition activity against Leishmania donovani amastigotes. The CHCl3-solubles of Putoria calabrica roots (IC50 1.9 µg[sol ]mL), Wendlandia ligustroides leaves (IC50 2.1 µg[sol ]mL) and Rhododendronluteum leaves (IC50 2.3 µg[sol ]mL) displayed the highest leishmanicidal potential. The majority of the extracts also possessed antiplasmodial activity against the multi-drug resistant K1 Plasmodium falciparum strain. The most potent antiplasmodial activity was observed with the CHCl3 extracts of Phlomis kurdica (IC50 1.5 µg[sol ]mL), P. leucophracta (IC50 1.6 µg[sol ]mL), Scrophularia cryptophila (IC50 1.8 µg[sol ]mL), Morina persica (IC50 1.9 µg[sol ]mL) and the aqueous root extract of Asperula nitida subsp. subcapitellata (IC50 1.6 µg[sol ]mL). Twenty-one extracts with significant antimalarial activity (IC50 〈 5 µg[sol ]mL) were also tested for their ability to inhibit the purified enoyl-ACP reductase (FabI), a crucial enzyme in the fatty acid biosynthesis of P. falciparum. The CHCl3 extract of Rhododendronungernii leaves (IC50 10 µg[sol ]mL) and the H2O-soluble portion of Rhododendronsmirnovii leaves (IC50 0.4 µg[sol ]mL) strongly inhibited the FabI enzyme. The preliminary data indicate that some (poly)phenolic compounds are responsible for the FabI inhibition potential of these extracts. The presented work reports for the first time the antiprotozoal activity of nine different genera as well as a target specific antimalarial screening for the identification of P. falciparum FabI inhibitors from medicinal plant extracts.
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  • 169
    Publication Date: 2020-07-21
    Description: The water-soluble part of the methanolic extract from the aerial parts of Scrophularia crypthophila, through chromatographic methods, yielded three new resin glycosides, crypthophilic acids A−C (1−3). Compounds 1−3 are tetraglycosides of (+)-3S,12S-dihydroxypalmitic acid. The structures of these and 10 known compounds were elucidated by spectroscopic and chemical means. All natural resin glycosides known so far have been obtained from Convolvulaceae plants; this is the first report of such glycosides from another, taxonomically unrelated family (Scrophulariaceae).
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  • 170
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    In:  Helvetica Chimica Acta, 74 (6). pp. 1273-1277.
    Publication Date: 2020-07-29
    Description: From the aerial parts of Lagotis stolonifera (Scrophulariaccae), a new phenylpropanoid glycoside, lagotoside (8), and the three known glycosides ehrenoside (5), verbascoside (= acteoside; 6), and plantamajoside (7) were isolated, together with the four known iridoid glucosides aucubin (1), catalpol(2), globularin (4), and lythantosalin (3). The structure of the new compound 8 was elucidated on the basis of chemical and spectral data as 2-(3-hy-droxy-4-methoxyphenyl)ethyl O-[α-L-arabinopyranosyl-(1 [RIGHTWARDS ARROW] 2)]-O-[α-L-rhamnopyranosyl-(1 [RIGHTWARDS ARROW] 3)]-4-O-feruloyl-β-D-glucopyranoside.
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  • 171
    Publication Date: 2014-02-25
    Description: Sediment samples were obtained from areas of diffuse hydrothermal venting along the seabed in the Tonga sector of the Tonga-Kermadec Arc, southwest Pacific Ocean. Sediments from Volcano 1 and Volcano 19 were analyzed by X-ray diffraction (XRD) and found to be composed primarily of the iron oxyhydroxide mineral, two-line ferrihydrite. XRD also suggested the possible presence of minor amounts of more ordered iron (hydr)oxides (including six-line ferrihydrite, goethite/lepidocrocite and magnetite) in the biogenic iron oxides (BIOS) from Volcano 1; however, Mössbauer spectroscopy failed to detect any mineral phases more crystalline than two-line ferrihydrite. The minerals were precipitated on the surfaces of abundant filamentous microbial structures. Morphologically, some of these structures were similar in appearance to the known iron-oxidizing genus Mariprofundus spp., suggesting that the sediments are composed of biogenic iron oxides. At Volcano 19, an areally extensive, active vent field, the microbial cells appeared to be responsible for the formation of cohesive chimney-like structures of iron oxyhydroxide, 2–3 m in height, whereas at Volcano 1, an older vent field, no chimney-like structures were apparent. Iron reduction of the sediment material (i.e. BIOS) by Shewanella putrefaciens CN32 was measured, in vitro, as the ratio of [total Fe(II)]:[total Fe]. From this parameter, reduction rates were calculated for Volcano 1 BIOS (0.0521 day−1), Volcano 19 BIOS (0.0473 day−1), and hydrous ferric oxide, a synthetic two-line ferrihydrite (0.0224 day−1). Sediments from both BIOS sites were more easily reduced than synthetic ferrihydrite, which suggests that the decrease in effective surface area of the minerals within the sediments (due to the presence of the organic component) does not inhibit subsequent microbial reduction. These results indicate that natural, marine BIOS are easily reduced in the presence of dissimilatory iron-reducing bacteria, and that the use of common synthetic iron minerals to model their reduction may lead to a significant underestimation of their biological reactivity.
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  • 172
    Publication Date: 2020-07-31
    Description: Centimeter‐scale mineralogical and chemical analyses of a diffusely venting, ∼280°C sulfide structure (called Roane) from the Mothra Hydrothermal Field on the Juan de Fuca Ridge reveal a complex growth history. These analyses document four well‐defined zones, which from the exterior to the interior of the structure include a barite‐silica zone (Fossil Worm Tube Zone), a silica‐sulfide zone (Silica Zone), a sulfide‐silica zone (Outer Sulfide Zone), and a sulfide ± gordaite ± silica zone (Inner Sulfide Zone). These features are a product of a myriad of processes that include extensive mineral replacement, ingress of seawater, fracturing and breakout of hot hydrothermal fluids, significant conductive cooling, and the sustained, broad‐scale outflow of warm fluids from the walls through a porous and permeable matrix. Roane lacks an open, throughgoing, chalcopyrite‐lined, central conduit. Instead, it hosts an anastomosing, discontinuous network of tortuous channels within the interior of a sponge‐like matrix of amorphous silica, sulfide, sulfate, and clay minerals. Megafaunal communities at the summit and sides of this mature, diffusely venting chimney provide a constructional framework for new growth. Isolation of hydrothermal fluid from seawater during progressive fossilization of megafauna and the early formation of barite‐silica assemblages promote flow of higher‐temperature fluids within the interior. Continued isolation of interior higher‐temperature fluids, through increased mineral precipitation and expansion of the structure, leads to a Zn sulfide + pyrite‐dominated permeable matrix and a network of tortuous channels that form a central porous conduit. This conduit is shielded by a weakly silicified, metal sulfide inner wall and a strongly silicified outer wall. The most outer portions of the walls are highly porous and sites of significant advection and mixing between hydrothermal fluids and seawater. The mineralogy and chemistry of Roane are strongly affected by ammonia‐ammonium buffering of the pH during cooling of the hydrothermal fluids. The two major results of the buffering are (1) precipitation of Zn sulfide at higher temperatures than are typical for bare‐rock systems, leading to the correlation of Cu, Zn, Cd, and Se and (2) increased deposition of amorphous silica and clay minerals.
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  • 173
    Publication Date: 2014-02-04
    Description: The effects of dissolved organic compounds on the determination of nanomolar concentrations of Fe(II) have been compared using two luminol-based flow injection chemiluminescence (FI-CL) methods. One used the direct injection of sample into the luminol reagent stream, and the other incorporated on-line solid-phase extraction of the analyte on an 8-hydroxyquinoline microcolumn. The CL signals from analyses of dissolved iron species (Fe(II) and Fe(III)) with model ligands and organic compounds were examined in high-purity water and seawater. The organic compounds included natural reducing agents (e.g., ascorbic acid), nitrogen σ-donor/π-acceptor compounds (e.g., 1,4-dipyridine, protoporphyrin IX), aromatic compounds (e.g., 1,4-dihydroxybenzene), synthetic iron chelators (e.g., EDTA), and natural iron binding compounds (e.g., desferrioxamine B, ferrichrome A). Fe(II) determinations for both luminol FI-CL methods were affected by submicromolar concentrations of redox-active compounds, strong iron binding ligands (i.e., log KFeL > 6), and compounds with electron-donating functional groups in both high-purity water and seawater. This was due to reactions between organic molecules and iron species before and during analysis, rather than chemiluminescence caused by the individual organic compounds. In addition, the effects of strong ligands and size speciation on Fe(II) recoveries from seawater following acidification (pH 2) and reduction (100 μM sodium sulfite) were investigated. © 2005 American Chemical Society.
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  • 174
    Publication Date: 2019-11-11
    Description: The capability of Time of Flight–Secondary Ion Mass Spectrometry (ToF-SIMS) of analysing molecular archaeal biomarkers in geobiological samples was tested and demonstrated. Using a bismuth cluster primary ion source, isopranyl glycerol di- and tetraether core lipids were detected in small amounts of total organic extracts from methanotrophic microbial mats, simultaneously and without further chemical treatment and chromatographic separation. ToF-SIMS was also employed to track the distribution of fossilized ether lipids in a massive carbonate (aragonite) microbialite that precipitated as a result of the microbial anaerobic oxidation of methane. An unambiguous signal was obtained when analysing a freshly broken rock surface (base of a microdrill core). Though some limitation occurred due to µm-topographical effects (sample roughness), it was possible to display the abundance of high molecular weight (C86) of tetraethers exposed in particular regions of the rock surface. ‘Molecular mapping’ revealed that a part of these molecules was encased within the rock fabric in a cluster-like distribution that might trace the arrangement of the calcifying microbial colonies in the once active mat system. The results reveal promising perspectives of ToF-SIMS for (i) the quasi-nondestructive analysis of lipids in extremely small geobiological samples at low concentrations; (ii) resolving the spatial distribution of these compounds on a µm2- to cm2-scale; and (iii) the more exact assignment of lipid biomarkers to their biological source.
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  • 175
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    In:  In: Microbial Ecology of the Oceans. Wiley, Hoboken, NJ, USA, pp. 159-205. 2. ed. ISBN 9780470043448
    Publication Date: 2019-09-23
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  • 176
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    AGU (American Geophysical Union) | Wiley
    In:  Journal of Geophysical Research: Solid Earth, 99 (2). pp. 2955-2968.
    Publication Date: 2020-06-02
    Description: Early Tertiary lithospheric breakup between Eurasia and Greenland was accompanied by a transient (∼3 m.y.) igneous event emplacing both the onshore flood basalts of the North Atlantic Volcanic Province (NAVP) and huge extrusive complexes along the continent‐ocean transition on the rifted continental margins. Seismic data show that volcanic margins extend 〉2600 km along the early Eocene plate boundary, in places underlain by high‐velocity (7.2–7.7 km/s) lower crustal bodies. Quantitative calculations of NAVP dimensions, considered minimum estimates, reveal an areal extent of 1.3×106 km2 and a volume of flood basalts of 1.8×106 km3, yielding a mean eruption rate of 0.6 km3/yr or 2.4 km3/yr if two‐thirds of the basalts were emplaced within 0.5 m.y. The total crustal volume is 6.6×106 km3, resulting in a mean crustal accretion rate of 2.2 km3/yr. Thus NAVP ranks among the world's larger igneous provinces if the volcanic margins are considered. The velocity structure of the expanded crust seaward of the continent‐ocean boundary differs from standard oceanic and continental crustal models. Based on seismic velocities this “volcanic margin” crust can be divided into three units of which the upper unit corresponds to basaltic extrusives. The regionally consistent velocity structure and geometry of the crustal units suggest that the expanded crust, including the high‐velocity lower crust which extends some distance landward of the continent‐ocean boundary, was emplaced during and subsequent to breakup. The volcanic margin crust was formed by excess melting within a wide zone of asthenospheric upwelling, probably reflecting the interaction of a mantle plume and a lithosphere already extending.
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  • 177
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    AGU (American Geophysical Union) | Wiley
    In:  Journal of Geophysical Research: Solid Earth, 89 (B9). pp. 7783-7795.
    Publication Date: 2020-06-19
    Description: Broadband receiver functions developed from teleseismic P waveforms recorded on the midperiod passband of Regional Seismic Test Network station RSCP are inverted for vertical velocity structure beneath the Cumberland Plateau, Tennessee. The detailed broadband receiver functions are obtained by stacking source‐equalized horizontal components of teleseismic P waveforms. The resulting receiver functions are most sensitive to the shear velocity structure near the station. A time domain inversion routine utilizes the radial receiver function to determine this structure assuming a crustal model parameterized by many thin, flat‐lying, homogeneous layers. Lateral changes in structure are identified by examining azimuthal variations in the vertical structure. The results reveal significant rapid lateral changes in the midcrustal structure beneath the station that are interpreted in relation to the origin of the East Continent Gravity High located northeast of RSCP. The results from events arriving from the northeast show a high‐velocity midcrustal layer not present in results from the southeast azimuth. This velocity structure can be shown to support the idea that this feature is part of a Keweenawan rift system. Another interesting feature of the derived velocity models is the indication that the crust‐mantle boundary beneath the Cumberland Plateau is a thick, probably laminated transition zone between the depths of 40 and 55 km, a result consistent with interpretations of early refraction work in the area.
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  • 178
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    Wiley
    In:  Current Protocols in Protein Science . 11.9.1-11.9.37.
    Publication Date: 2016-11-25
    Description: Amino acid analysis is used to determine the amino acid content of amino acid–, peptide- and protein-containing samples. With minor exceptions, proteins are long linear polymers of amino acids connected to each other via peptide bonds. The first step of amino acid analysis involves hydrolyzing these peptide bonds. The liberated amino acids are then separated, detected, and quantified. The method was first developed by Moore, Stein and coworkers in the 1950s using HCl acid hydrolysis, and, despite considerable effort by many workers, the basic methodology remains relatively unchanged. This unit provides an overview and strategic planning for amino acid analysis, discussing a range of methodologies and issues. In addition, several common methods used for analysis of l-amino acids are described in detail, including: HCl acid hydrolysis, performic acid oxidation for methionine and cysteine analysis, base hydrolysis for tryptophan analysis, analysis of free amino acids, and analysis of reactive lysine.
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  • 179
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    In:  Journal of Zoology, 228 (2). pp. 247-264.
    Publication Date: 2021-05-11
    Description: Sampling inadequacies and an inability to distinguish age classes have limited our knowledge of octopus biology in nature. Using an artificial shelter sampling technique (Voight, 1988a), and defining mature males by the presence of enlarged suckers (Voight, In press), an intertidal population of Octopus digueti was monitored for one year. In total, 803 octopuses were narcotized; the mass, sex, arm injuries and reproductive condition of each octopus were recorded. Captures were more frequent in lower intertidal areas offering higher shelter availability and a more moderate environment. Capture rates, assumed to indicate octopus movement, correlated with sea temperature except during full moon periods when they were reduced. Over 26%, of the octopuses handled had damaged arms or arm tips, with dorsal arm pairs more often injured. The overall sex ratio was significantly male biased, probably due to maturity‐linked mobility differences between the sexes. Reproduction occurred throughout the year; reproductively competent adults, brooding females and juveniles were present every month. However, annual temperature oscillations synchronize spring hatching of eggs spawned from winter to early spring, creating a clear spring cohort. Growth and age at maturity of males in the spring and autumn cohorts were estimated. Variance was too high for these parameters to be estimated in the winter cohort. Growth rates of males over 12 weeks of age did not differ from those reported in laboratory rearing studies. Estimated average age at maturity ranged from 20 to 32 weeks, depending on temperature.
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  • 180
    Publication Date: 2021-05-05
    Description: The demersal fish and cephalopod communities of the continental shelf and upper slope from 17 to 395m deep were studied during five annual cruises between Cape Agulhas and Port Alfred, South Africa. The cruises showed a consistent pattern of an inshore community (〈100m), a shelf community (c. 90–190m) and a shelf‐edge/upper slope fauna (〉200m). These groups were identified by dendrograms and multidimensional scaling cluster analysis, which supported on‐board observations of catch variation with depth. Although the boundaries are not clearly defined, examination of physical features at the clustered stations suggests that depth, temperature and, to a lesser extent, oxygen concentration are important in the grouping. Occasional, apparently anomalous associations of inshore stations suggested that water temperature and oxygen may over‐ride the normal depth distributions of the species groups. This intimates that patterns offish and cephalopod distribution may be dynamic and in part related to the physical parameters of the water body.
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  • 181
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    In:  Conservation Biology, 23 (4). pp. 847-858.
    Publication Date: 2021-08-24
    Description: The deep ocean is home to the largest ecosystems on our planet. This vast realm contains what may be the greatest number of animal species, the greatest biomass, and the greatest number of individual organisms in the living world. Humans have explored the deep ocean for about 150 years, and most of what is known is based on studies of the deep seafloor. In contrast, the water column above the deep seabed comprises more than 90% of the living space, yet less than 1% of this biome has been explored. The deep pelagic biota is the largest and least-known major faunal group on Earth despite its obvious importance at the global scale. Pelagic species represent an incomparable reservoir of biodiversity. Although we have yet to discover and describe the majority of these species, the threats to their continued existence are numerous and growing. Conserving deep pelagic biodiversity is a problem of global proportions that has never been addressed comprehensively. The potential effects of these threats include the extensive restructuring of entire ecosystems, changes in the geographical ranges of many species, large-scale elimination of taxa, and a decline in biodiversity at all scales. This review provides an initial framework of threat assessment for confronting the challenge of conserving deep pelagic biodiversity; and it outlines the need for baseline surveys and protected areas as preliminary policy goals.
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  • 182
    Publication Date: 2021-08-23
    Description: Understanding how environmental forcing has generated and maintained large-scale patterns of biodiversity is a key goal of evolutionary research and critical to predicting the impacts of global climate change. We suggest that the initiation of the global thermohaline circulation provided a mechanism for the radiation of Southern Ocean fauna into the deep sea. We test this hypothesis using a relaxed phylogenetic approach to coestimate phylogeny and divergence times for a lineage of octopuses with Antarctic and deep-sea representatives. We show that the deep-sea lineage had their evolutionary origins in Antarctica, and estimate that this lineage diverged around 33 million years ago (Ma) and subsequently radiated at 15 Ma. Both of these dates are critical in development of the thermohaline circulation and we suggest that this has acted as an evolutionary driver enabling the Southern Ocean to become a centre of origin for deep-sea fauna. This is the first unequivocal molecular evidence that deep-sea fauna from other ocean basins originated from Southern Ocean taxa and this is the first evidence to be dated.
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  • 183
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    AGU (American Geophysical Union) | Wiley
    In:  Journal of Geophysical Research: Solid Earth, 95 (B10). pp. 15303-15318.
    Publication Date: 2021-02-01
    Description: To study the resolving power of teleseismic P waveforms for receiver structure, we model synthetic waveforms using a time domain waveform inversion scheme beginning with a range of initial models to estimate the range of acceptable velocity structures. To speed up the waveform inversions, we implement Randall's (1989) efficient algorithms for calculating differential seismograms and include a smoothness constraint on all the resulting velocity models utilizing the “jumping” inversion technique of Shaw and Orcutt (1985). We present the results of more than 235 waveform inversions for one‐dimensional velocity structures that indicate that the primary sensitivity of a receiver function is to high wavenumber velocity changes, and a depth‐velocity product, not simply velocity. The range of slownesses in a typical receiver function study does not appear to be broad enough to remove the depth‐velocity ambiguity; the inclusion of a priori information is necessary. We also present inversion results for station RSCP, located in the Cumberland Plateau, Tennessee. Our results are similar to those from a previous study by Owens et al. (1984) and demonstrate the uncertainties in the resulting velocity estimate more clearly.
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  • 184
    Publication Date: 2021-08-23
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  • 185
    Publication Date: 2021-08-23
    Description: To determine the pattern of spatial genetic structure in the endemic Southern Ocean octopus Adelieledone polymorpha, microsatellite loci were isolated from partial genomic libraries enriched for repetitive DNA motifs. Seven dinucleotide and two trinucleotide microsatellite loci were isolated successfully and levels of polymorphism were quantified in 34 individuals sampled from the Southern Ocean near South Georgia. No pairs of microsatellite loci were linked significantly; however, one locus deviated (P 〈 0.05) from Hardy–Weinberg equilibrium. Overall, the nine loci produced between five and 16 alleles, with observed and expected heterozygosities varying between 0.22 and 0.86 and between 0.21 and 0.94 respectively. This is the first description of microsatellite loci from an octopus endemic to the Southern Ocean, and these genetic markers are being used to quantify spatial structure within A. polymorpha.
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  • 186
    Publication Date: 2021-08-24
    Description: Aim  One of the most recognized ecological paradigms on earth is the increase in species richness from the poles towards the equator. Here we undertake a comprehensive survey of the latitudinal gradients of species richness (LGSR) of coastal cephalopod fauna in the western (WA) and eastern margins (EA) of the Atlantic Ocean, and test climate and non-climate theories to explain the variation in diversity. Location  The coastal Atlantic Ocean. Methods  The diversity and geographical ranges of coastal cephalopods were investigated by means of an exhaustive survey of the primary literature, reports and on-line data bases. In order to test the productivity, ambient energy and area hypotheses, we investigated the relationship between diversity and net primary production (NPP), sea surface temperature (SST; measure of solar energy input) and continental shelf area, respectively. Results  LGSR of cephalopod molluscs are present at both Atlantic coasts, but are quite distinct from each other. Historical processes (rise of the Central American Isthmus, formation of ‘Mare Lago’ and glaciations) explained much of the shape and the zenith of LGSR. Contemporary climate and non-climate variables also each explained over 83% and 50% of the richness variation in WA and EA, respectively, and the best fitted models accounted for 〉 92% of the variance. By combining latitude with depth a strong Rapoport effect was observed in WA but not in EA. Main conclusions  Besides the evolutionary history, we demonstrate that the contemporary environmental gradients (SST and NPP), shelf area and extent of coral habitat can predict many of the diversity patterns. The longitudinal difference in Rapoport's bathymetric rule is attributed to western fauna specialization to shallow coral reef habitats and greater ecological tolerance of eastern fauna to upwelling ecosystem dynamics. A combined approach of historical biogeography and species–area–energy theories was essential to fully understand broad-scale variation in cephalopod biodiversity.
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  • 187
    Publication Date: 2021-09-06
    Description: The inverse relationship between egg size in marine animals and water temperature was simultaneously described by two outstanding marine scientists: G. Thorson and T.S. Rass. This rule consists of two different phenomena. Thorson's rule describes ecological processes related to changes in larval biology and morphology that are caused by a selective pressure of natural selection on the different types of larval development. It belongs to the realm of macro-evolution. Rass's rule describes physiological processes within populations and species, and between closely related species. This is not related to changes in reproductive strategy, and therefore belongs to the realm of micro-evolution and to the early stages of macro-evolution. Populations begin to produce larger eggs in colder environments because of phenotypic plasticity. Thorson's rule describes temperature-dependent changes in the relative abundance of small- and large-egged species, whereas Rass's rule describes a temperature-dependent relative position of both groups within an adaptive range of reproductive strategies.
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  • 188
    Publication Date: 2021-09-07
    Description: This is the first record of intersexuality to have been found within the Cephalopoda. Seven out of 16 sexually mature Ancistrocheirus lesueurii males from southern African waters had nidamental glands in the mantle cavity in addition to a normally developed male reproductive system (spermatophoric complex, testis and hectocotylus). The frequency of occurrence suggests that feminization in male A. lesueurii is not a rare phenomenon in the south-eastern Atlantic. Normal A. lesueurii shows sexual size dimorphism, with females growing larger than males. The intersexual males formed a distinct size group intermediate between normal males and females, and their testis mass and spermatophore length were significantly larger than in normal males. The absence of oocytes and oviducts in intersexual males indicates that feminization represents pseudohermaphroditism. Intersexuality does not seem to affect male functionality and is apparently advantageous in that larger body size is accompanied by larger testis and spermatophores.
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  • 189
    Publication Date: 2020-01-29
    Description: We collated aerial census data collected during the late 1980s to early 2000s for large herbivore populations in eight large census zones in Tanzania. Of the ungulate populations that showed significant changes in densities at the start versus end of this decade, most declined; very few populations increased significantly. Thomson's gazelle, Grant's gazelle, hartebeest, reedbuck, roan antelope, sable antelope, warthog and zebra, for example, declined in over 50% of the zones where they were surveyed. Interestingly, small-bodied species fared particularly poorly in many census zones, whereas elephant and giraffe generally fared well across the country. Most populations of all herbivores declined in some portions of the country (e.g. Burigi-Biharamulo, Katavi, Greater Ruaha and Tarangire census zones). These surveys suggest that, even in a country renowned for its protected areas and conservation commitment, some large herbivore populations need more conservation attention in order to remain stable.
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  • 190
    Publication Date: 2020-04-22
    Description: 1. Survival, growth and downstream dispersal of trout (especially 0 group) and the relationships of these variables to initial stocking density were studied in north Pennine streams. 2. Two methods were used. First, electrofishing censuses were made in a marked reach of each of four streams over a period of about 20 years. Second, downstream moving trout were trapped in two streams over a 10-year period. Each stream upstream of the trap was experimentally stocked with `swim-up' trout fry, using a different population density each year. 3. Before 1970 the four census reaches showed very large year-upon-year variations in August trout parr densities, with local failures of recruitment in some years. Population densities after completion of Cow Green Reservoir (1970) were generally higher but still showed wide fluctuations. 4. Survival (including the effects of losses by dispersal) from swim-up to early August, for starting population densities of 0-10 fry m-2, was about 10% regardless of initial density. Estimates of survival from August to early October were 30-50% for the census reaches and 55-65% for the areas upstream of the traps. However, for August 0 group densities of 0-0.9 m-2, estimated instantaneous loss rate from August of the first year of life up to age 40-65 months showed a positive curvilinear relationship to population density in the first year of life. Loss rate was, therefore, density-dependent during this period. 5. Estimated instantaneous growth rate day-1 of 0 group fish from swim-up to August and from swim-up to October was inversely related to the natural logarithm of August population density and this was most apparent for August densities of 〈0.15 fish m-2. 6. Although survival from swim-up to August was proportional (about 10%, at starting densities of 10 m-2 or less), the percentages of the total loss attributable to mortality and to downstream dispersal varied considerably with starting density. At starting densities around 4-5 fish m-2 dispersal was negligible. As initial density rose above 4-5 fish m-2 and towards 10 fish m-2 the percentage of loss attributable to dispersal rose towards 30%. As initial densities decreased from 4 to 1.4 fish m-2, the percentage rose to around 20%. Below a starting density of 1.4 fish m-2 the percentage decreased.
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  • 191
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    American Chemical Society
    In:  Environmental Science & Technology, 39 (23). pp. 9009-9015.
    Publication Date: 2020-06-19
    Description: A critical examination of published data obtained primarily from recent nuclear magnetic resonance spectroscopy, X-ray absorption near-edge structure spectroscopy, electrospray ionization-mass spectrometry, and pyrolysis studies reveals an evolving new view of the molecular structure of soil humic substances. According to the new view, humic substances are collections of diverse, relatively low molecular mass components forming dynamic associations stabilized by hydrophobic interactions and hydrogen bonds. These associations are capable of organizing into micellar structures in suitable aqueous environments. Humic components display contrasting molecular motional behavior and may be spatially segregated on a scale of nanometers. Within this new structural context, these components comprise any molecules intimately associated with a humic substance, such that they cannot be separated effectively by chemical or physical methods. Thus biomolecules strongly bound within humic fractions are by definition humic components, a conclusion that necessarily calls into question key biogeochemical pathways traditionally thought to be required for the formation of humic substances. Further research is needed to elucidate the intermolecular interactions that link humic components into supramolecular associations and to establish the pathways by which these associations emerge from the degradation of organic litter.
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  • 192
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    In:  Journal of Chemical Technology & Biotechnology, 84 (1). pp. 6-12.
    Publication Date: 2020-07-14
    Description: OVERVIEW: Extraction and processing with supercritical fluids (SCF) is increasingly gaining importance in the food, pharmaceutical and chemical industries. Supercritical fluid extraction (SCFE) using carbon dioxide (CO2) as a solvent has emerged as a highly popular technology today over the conventional techniques for extraction of natural products for rapid, contamination‐free, tailor‐made extracts having superior quality and shelf‐life and high potency of active ingredients. IMPACT: The importance of SCFE is on the rise due to consumers' preferences for ‘natural’ as opposed to synthetic substances and, impending regulations for environmental protection, safety, nutritive and toxicity levels. APPLICATIONS: Newer applications of SCFs include separation and purification of chemicals, cleaning, coating, particle formation, textile dyeing, aerogel drying, reactions with separation and food preservation. Some fundamental aspects of SCFs, various processing technologies with SCFs, and a few newer potential applications are presented in this article.
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  • 193
    Publication Date: 2021-02-22
    Description: King Penguins Aptenodytes patagonicus which were rearing chicks were studied during three summers from November 1991 to March 1994 at South Georgia. Stomach samples (n=115) collected by flushing had a mean mass of 1308 g. Fish mass was allocated to each species based on the relationship between fish mass and otolith length. Three mesopelagic lanternfishes (Myctophidae), Krefftichthys anderssoni, Electrona carlsbergi and Protomyctophum choriodon, dominated the diet both by numbers and mass. They were small fish with mean mass of 3–7 g. Overall, K. anderssoni dominated the diet in terms of numbers and mass. Although Barracudina Notolepis coatsi occurred in 〈3% of the diet by numbers, it was large (106 g) and was second most important in terms of mass. Squid represented 〈3% of the diet by mass. Although the chick‐rearing success was poor in the 1993–1994 summer, meal size was not reduced but foraging trips were longer. In the 1993–1994 summer, a larger proportion of the otoliths were not identifiable because they were more completely digested. Fewer otoliths were identified as being those of K. anderssoni, but we argue that about 90% of the unidentified otoliths were K. anderssoni. There was also more squid and N. coatsi in the diet during the poor summer. A consistent trend was that P. choriodon was rare or absent in early summer but more important later in the year, and at the end of 1992–1993, it was the dominant prey. We conclude that myctophid fish, especially K. anderssoni, are the main summer prey of King Penguins rearing chicks at South Georgia, as found in other recent studies in the Southern Ocean.
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  • 194
    Publication Date: 2021-04-26
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  • 195
    Publication Date: 2021-04-26
    Description: Among King Penguins Aptenodytes patagonica at Possession Island, one of the Crozet Islands, the length of the moult period, pre‐laying period, incubating and brooding shifts were highly variable according to the year and to the stage of the breeding season. The moulting period was shorter in late breeders than in early breeders. Only half of the birds which successfully reared a chick bred the following cycle, but late in the season. Almost all these late breeders were unsuccessful. The reasons for the high variability in the breeding pattern observed in this species between years, as well as between colonies and between individuals are discussed. Breeding success was on average 30.6% and survival during the first year at sea could reach 50%. The survival of adult birds has increased during the past 10 years from 90.7% to 95.2% per annum. Despite an almost biennial breeding frequency and a very high rate of chick loss during the winter fast, the King Penguin population of Possession Island has doubled between 1966 and 1985 due to a high survival rate of adult and immature birds. The increase during the last decade in adult survival and in adult and chick condition suggests that the population increase could be the result of an improvement in food availability.
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  • 196
    Publication Date: 2021-06-16
    Description: We give details of the biological and pathological findings in a mass stranding of 19 white-sided dolphins on the west coast of Ireland. The pod consisted of adults and calves; no juveniles were present. The calf of a recently parturient female was not found. The presence of small foetuses suggested that mating took place in late August or early September. The largest and oldest male was severely diseased but the remainder of the pod were in good health although some minor lesions were found. The site where the animals came ashore was compatible with the geomagnetic theory of mass strandings.
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  • 197
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    In:  Aquaculture Research, 36 (9). pp. 876-881.
    Publication Date: 2021-08-23
    Description: Loligo vulgaris is a commercially important squid throughout the Mediterranean region and is a candidate species in biomedical and aquaculture research. Some loligo species (L. opalescens, L. forbesi, Sepiteuthis lessoniana) have now been cultured through some successive generations in closed, recirculating seawater systems. The effects of salinity on hatching European Squid (L. vulgaris Lamarck, 1798) eggs were investigated during November 2004. The egg capsules were incubated directly in salinity of 32, 34, 36, 38, 40, 42 and 37 g L−1 (control group) at 19.8°C (SD 1.2°C), and a photoperiodicity of 12 h light:12 h dark for 16–23 days before hatching. In all treatments, the eggs were developed and hatched normally after 16–22 days at 32 g L−1, 17–22 days at 34, 18–21 days at 42 g L−1, 18–22 days at 36 and 40 g L−1, 19–22 days at 37 g L−1 and 19–23 h at 38 g L−1. In the experiments, the highest hatching rate and hatching success (HS) of the eggs were obtained at 38 g L−1 (hatching rate: 100% (SD 0%) and HS: 96.7% (SD 3.5%)) and the lowest hatching rate at 42 g L−1 (hatching rate: 3% (SD 6%) and HS: 0%). Dorsal mantle lengths (DML) of new hatchlings ranged from 2.08 to 2.80 mm. The present study showed that salinity affects the hatching rate and HS of eggs and first hatching time and DML of paralarvae in L. vulgaris. The squid eggs at stage 11 (I) can tolerate 5 g L−1 reduction and 3 g L−1 increase in salinity.
    Type: Article , PeerReviewed
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    Wiley
    In:  Journal of Applied Ichthyology, 10 (4). pp. 353-361.
    Publication Date: 2018-08-17
    Description: The effects of a floating fish farm in Kiel Fjord, Western Baltic, have been studied in the summer 1991 by underwater video, sediment and benthos samples. Significant alterations of the benthos and sediment geochemistry as compared to control stations were documented. The sediment under the farm is anoxic, organically enriched (1.5 to 3.5 fold), covered by sulfur bacteria, and almost free of benthic macro fauna. Rates of decay of organic carbon and oxygen uptake (derived from porewater profiles) are high and account for 100–150 mmol m‐2 d‐1 in summer.
    Type: Article , PeerReviewed
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    Wiley
    In:  Biologie in unserer Zeit, 24 (2). p. 82.
    Publication Date: 2018-08-13
    Description: Nicht leicht haben es die Vertreter einer wenig beschriebenen Terordnung, nach denen wir diesmal fragen. Birgt doch ihr Parasitendasein mit mehrfachem Wirtswechsel in den Weiten der Ozeane nicht wenige Gefahren.
    Type: Article , NonPeerReviewed
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  • 200
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    In:  Vom Wasser, 21 . pp. 13-32.
    Publication Date: 2018-09-03
    Type: Article , PeerReviewed
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