ALBERT

Description: Micro-Raman spectroscopy has been used on adult bivalve shells to investigate organic and inorganic shell components but has not yet been applied to bivalve larvae. It is known that the organic matrix of larval shells contains pigments, but less is known about the presence or source of these molecules in larvae. We investigated Raman spectra of seven species of bivalve larvae to assess the types of pigments present in shells of each species and how the ratio of inorganic : organic material changes in a dorso-ventral direction. In laboratory experiments, we reared larvae of three clam species in waters containing different organic signatures to determine if larvae incorporated compounds from source waters into their shells. We found differences in spectra and pigments between most species but found less intraspecific differences. A neural network classifier for Raman spectra classified five out of seven species with greater than 85% accuracy. There were slight differences between the amount and type of pigment present along the shell, with the prodissoconch I and shell margin areas being the most variable. Raman spectra of 1-day-old larvae were found to be differentiable when larvae were reared in waters with different organic signatures. With micro-Raman spectroscopy, it may be possible to identify some unknown species in the wild and trace their natal origins, which could enhance identification accuracy of bivalve larvae and ultimately aid management and restoration efforts.

Description: An abrupt lithofacies change between calcareous shale and noncalcareous shale occurs in strata deposited in the mid-Cretaceous Greenhorn Seaway in the southeastern corner of Montana. The facies were correlated lithostratigraphically using bentonites and calcarenites. The lithocorrelations were then refined using ammonites, foraminifera, and calcareous nannofossils. Twenty-five time slices were defined within the upper middle and lower upper Cenomanian strata. Biofacies analysis indicate that lithofacies changes record the boundary or oceanic front between two water masses with distinctly different paleoceanographic conditions. One water mass entered the seaway from the Arctic and the other from the Gulf of Mexico/Tethys. The microfauna and microflora permit interpretation of the environmental conditions in each water mass. At times when the front was near vertical, the two water masses were of the same density but of different temperatures and salinities.

Description: Tephra provides regional chronostratigraphical marker horizons that can link different climate archives with highly needed accuracy and precision. The results presented in this work exemplify, however, that the intermittent storage of tephra in ice sheets and during its subsequent iceberg transport, especially during glacial stages, constitutes a potential source of serious error for the application of tephrochronology to Nordic Seas and North Atlantic sediment archives. The peak shard concentration of the rhyolitic component of the North Atlantic Ash Zone II (NAAZ-II) tephra complex, often used to correlate marine and ice core records in Marine Isotope Stage (MIS) 3, is shown to lag the eruption event by ca. 100–400 years in some North Atlantic and Norwegian Sea cores. While still allowing for a correlation of archives on millennial timescales, this time delay in deposition is a major obstacle when addressing the lead–lag relationship on short timescales (years to centuries). A precise and accurate determination of lead–lag relationships between archives recording different parts of the climate system is crucial in order to test hypotheses about the processes leading to abrupt climate change and to evaluate results from climate models. Copyright # 2011 John Wiley & Sons, Ltd.

Description: Alteration patterns in the lavas and dykes of the Troodos Ophiolite, Cyprus, record a complex history of axial hydrothermal alteration, crustal aging, and subsequent uplift and emplacement of the ophiolite. Field mapping shows that distribution of five alteration zones, each with distinct mineralogical, geochemical, and hydrologie characteristics, is influenced by igneous stratigraphy, structure, and the nature and thickness of the overlying sediments. Paragenetic sequences of secondary minerals indicate that alteration conditions changed progressively as the crust cooled and moved off-axis. Along spreading axes, low temperatures (≤50°C) were maintained by the rapid flow of seawater in and out of the lavas, and only minimal alteration took place. In contrast, lower water/rock ratios and higher temperatures (〉200°C) in the dykes promoted extensive seawater-rock interaction. Although the sharp rise in temperature between the two regimes generally coincides with the lava-dyke transition, late-stage intrusions or hydrothermal upwelling zones locally cause high-temperature alteration to extend upward into the lavas. As a segment of crust moved off-axis, temperatures remained low in the lavas and progressively decreased, from 〉250° to 〈80°C, in the dykes. High permeability in the uppermost lavas led to the downward migration of an oxidative alteration front whose thickness and spatial distribution was dependent upon the rate and nature of sedimentation and, thus, the original seafloor morphology. Although field relations show that alteration has a consistent vertical pattern in Troodos, the alteration zones are not laterally continuous, and the stratigraphie depth of their boundaries varies considerably.

Description: In the western equatorial Pacific, the El Niño/Southern Oscillation (ENSO) phenomenon is characterized by precipitation variability associated with the migration of the Indonesian low pressure cell to the region of the date line and the equator. During ENSO events, Tarawa Atoll (1°N, 172°E) experiences heavy rainfall which has an estimated δ18O of about −8 to −10‰ δ18OSMOW. At Tarawa, sufficient precipitation of this composition falls during ENSO events to alter the δ18O and the salinity of the surface waters. Oxygen isotope records from two corals collected off the reef crest of Tarawa reflect rainfall variations associated with both weak and strong ENSO conditions, with approximately monthly resolution. Coral skeletal δ18O variations due to small sea surface temperature (SST) changes are secondary. These records demonstrate the remarkable ability of this technique to reconstruct variations in the position of the Indonesian Low from coral δ18O records in the western equatorial Pacific, a region which has few paleoclimatic records. The coral isotopic data correctly resolve the relative magnitudes of recent variations in the Southern Oscillation Index. Combining the Tarawa record with an oxygen isotopic history from a Galápagos Islands coral demonstrates the ability to distinguish the meteorologic (precipitation) and oceanographic (SST) anomalies that characterize ENSO events across the Pacific Basin over the period of common record (1960–1979). Comparison of the intensity of climatic anomalies at these two sites yields insight into the spatial variability of ENSO events. Isotope records from older corals can provide high-resolution, Pacific-wide reconstructions of ENSO behavior during periods of different climate boundary conditions.

Description: As shown by the work of Dansgaard and his colleagues, climate oscillations of one or so millennia duration punctuate much of glacial section of the Greenland ice cores. These oscillations are characterized by 5°C air temperature changes, severalfold dust content changes and 50 ppm CO2 changes. Both the temperature and CO2 change are best explained by changes in the mode of operation of the ocean. In this paper we provide evidence which suggests that oscillations in surface water conditions of similar duration are present in the record from a deep sea core at 50°N. Based on this finding, we suggest that the Greenland climate changes are driven by oscillations in the salinity of the Atlantic Ocean which modulate the strength of the Atlantic's conveyor circulation.

Description: Many of the difficulties of staining plastic embedded tissues for light and electron microscopy derive from physical exclusion of hydrophilic staining reagents by hydrophobic embedding media. Structures which stain most intensely with hydrophilic reagents usually contain less hydrophobic plastic than do non-staining structures. Such incomplete infiltration is apparently caused by exclusion of viscous, hydrophobic monomers by physically dense and/or well hydrated tissue elements. In keeping with this, generalized staining of tissues embedded in hydrophobic media does occur when hydrophobic reagents are used. Staining of plastic-free structures with single hydrophilic reagents or with sequences of such reagents, is, however, largely rate-controlled. The surprising similarity of hydrophilic and hydrophobic plastic embedding media is discussed. Limits of this simple model are explored, with a consideration of the roles of fixative and of monomer-tissue reactions

Description: INTRODUCTION: Lichens are self-sustaining partnerships comprising fungi as shape-forming partners for their enclosed symbiotic algae. They produce a tremendous diversity of metabolites (1050 metabolites described so far). OBJECTIVES: A comparison of metabolic profiles in nine lichen species belonging to three genera (Lichina, Collema and Roccella) by using an optimised extraction protocol, determination of the fragmentation pathway and the in situ localisation for major compounds in Roccella species. METHODS: Chemical analysis was performed using a complementary study combining a Taguchi experimental design with qualitative analysis by high-performance liquid chromatography coupled with mass spectrometry techniques. RESULTS: Optimal conditions to obtain the best total extraction yield were determined as follows: mortar grinding to a fine powder, two successive extractions, solid:liquid ratio (2:60) and 700 rpm stirring. Qualitative analysis of the metabolite profiling of these nine species extracted with the optimised method was corroborated using MS and MS/MS approaches. Nine main compounds were identified: 1 β-orcinol, 2 orsellinic acid, 3 putative choline sulphate, 4 roccellic acid, 5 montagnetol, 6 lecanoric acid, 7 erythrin, 8 lepraric acid and 9 acetylportentol, and several other compounds were reported. Identification was performed using the m/z ratio, fragmentation pathway and/or after isolation by NMR analysis. The variation of the metabolite profile in differently organised parts of two Roccella species suggests a specific role of major compounds in developmental stages of this symbiotic association. CONCLUSION: Metabolic profiles represent specific chemical species and depend on the extraction conditions, the kind of the photobiont partner and the in situ localisation of major compounds.

Description: The seasonal variation of the intrusion of the Philippine Sea Water into the South China Sea was studied by analyzing the historical hydrographic station data in the northern South China Sea and the Philippine Sea. Water masses at 150, 200, and 250 m were classified by discriminant analysis according to their temperature-salinity characteristics. At each depth, most water in the study region was classified into two groups representing the Philippine Sea Water and the South China Sea Water, respectively. The geographic distribution of water masses in the South China Sea shows that the Philippine Sea Water was present along the continental margin south of China between October and January. A westward current in the northern South China Sea in winter was inferred from the distribution of the intrusion water.

Description: Multichannel seismic reflection data were used to determine the evolutionary history of the forearc region of the central Aleutian Ridge. Since at least late Miocene time this sector of the ridge has been obliquely underthrust 30° west of orthogonal convergence by the northwestward converging Pacific plate at a rate of 80–90 km/m.y. Our data indicate that prior to late Eocene time the forearc region was composed of rocks of the arc massif thinly mantled by slope deposits; the forearc region probably lacked both major depositional basins and a tectonically attached accretionary prism of offscraped oceanic deposits. Beginning in latest Miocene or earliest Pliocene time, a zone of outer-arc structural highs and a forearc basin began to form. Formation of these companion intraarc structures may be linked to the late Neogene growth of an accretionary wedge that formed as the result of the deposition of a thick turbidite wedge in the Aleutian Trench. Initial structures of the zone of outer-arc highs formed as the thickening wedge underran, compressively deformed, and uplifted the seaward edge of the arc massif above a landward dipping backstop thrust. Forearc basin strata ponded arcward of the elevating zone of outer-arc highs. However, most younger structures of the zone of outer-arc highs cannot be ascribed simply to the orthogonal effects of an underrunning wedge. Oblique convergence created a major right-lateral shear zone (the Hawley Ridge shear zone) that longitudinally disrupted the zone of outer-arc highs, truncating the seaward flank of the forearc basin and shearing the southern limb of Hawley Ridge, an exceptionally large antiformal outer-arc high structure. Slivers of forearc basement rocks and overlying strata have been transported along the shear zone that is flanked by differentially elevated structures attributed to localized transpressive and transtensional processes. Uplift of Hawley Ridge may be related to the thickening of the arc massif by westward directed basement duplexes. In addition, the forearc is disrupted by structures transverse to the margin that occur where unusually high-stress accumulations have resulted in the rupture of repeated great earthquakes. It is likely that many ancient active margins evolved in tectonic and depositional settings similar to those of the central Aleutian Ridge. Great structural complexity, including the close juxtaposition of coeval structures recording compression, extension, differential vertical movements, and strike-slip displacement, should be expected, even within areas of generally kindred tectonostratigraphic terranes.

Description: Uncertainty over the identity and age of Toba tephras across peninsular India persists, with radiometric age dates contradicting earlier compositional data, which have been used to identify this important Stratigraphie marker as the Youngest Toba Tuff (YTT). To address this issue, new single glass shard analyses have been performed for samples from Morgaon and Bori (north-western India), which have recently been dated at c. 800 ka. These, and indeed all Toba tephra samples thus far analysed from India, show the presence of four populations of glass shards (defined by their Ba/Y ratio), which uniquely identifies them as products of the c. 75-ka Youngest Toba eruption. Confirmation that the YTT fingerprint is characteristic comes from new analyses of Oldest Toba Tuff (OTT) glass shards from five sites in the Indian Ocean. These are compositionally identical to Layer D from the ODP site 758 Sediment core (c. 800 ka), and belong to a single, low-Ba population, clearly different from YTT. These analyses show that there is essentially no reworked OTT material in the YTT eruption, and indicate unequivocally that all known Toba tephra occurrences in India belong to the c. 75-ka Youngest Toba eruption.

Description: Several geochemical anomalies were observed before the Haichen, Longling, Tangshan, and Songpan earthquakes and their strong aftershocks. They included changes in groundwater radon levels; chemical composition of the groundwater (concentration of Ca++, Mg++, Cl−, SO4= and HCO3− ions); conductivity; and dissolved gases such as H2, CO2, etc. In addition, anomalous changes in water color and quality were observed before these large earthquakes. Before some events gases escaped from the surface, and there were reports of "ground odors" being smelled by local residents. The large amount of radon data can be grouped into long-term and short-term anomalies. The long-term anomalies have a radon emission build up time of from a few months to more than a year. The short-term anomalies have durations from a few hours or less to a few months.

Description: Current measurements from two consecutive yearlong deployments of three moored stations at the western end of the equator in the Atlantic, along 44°W, are used to determine the northwestward flow of warm water in the upper several 100 m and of the southeastward counterflow of North Atlantic Deep Water (NADW). Measurements from three acoustic Doppler current profilers (ADCPs) looking upward from 300 m toward the surface allowed calculation of a time series of upper layer transports over 1 year. Mean transport through the array for the upper 300 m is 23.8 Sv with an annual cycle of only ±3 Sv that has its maximum in June-August and minimum in northern spring. Estimated additional mean northwestward transport in the range 300–600 m is 6.7 Sv, based on moored data and shipboard Pegasus and lowered ADCP profiling. In the depth range 1400–3100 m a current core with maximum annual mean southeastward speed of 30 cm s−1 is found along the continental slope that carries an estimated upper NADW transport of 14.2–17.3 Sv, depending on the extrapolation used between the mooring in the core and the continental slope. This transport is higher than off-equatorial estimates and suggests near-equatorial recirculation at the upper NADW level, in agreement with northwestward mean flow found about 140 km offshore. Below 3100 m and above the 1.8°C isotherm, only a small core of lower NADW flow with speeds of 10–15 cm s−1 is found over the flat part of the basin near 1.5°N, clearly separated from the continental slope by a zone of near-zero mean speeds. Estimated transport of that small current core is about 4.5 Sv, which is significantly below other estimates of near-equatorial transport of lower NADW and suggests that a major fraction of lower NADW may cross the 44°W meridian north of the Ceara Rise. Intraseasonal variability is large, although smaller than observed at 8°N near the western boundary. It occurs at a period of about 1 month when it is dominant in the near-surface records and corresponds to earlier observations in the equatorial zones of all oceans and at a period of about 2 months when it is dominant at the NADW level and could be imported either from the north along the boundary or from the east along the equator. The existence of an annual cycle in the deep currents of a few centimeters per second amplitude, as suggested by high-resolution numerical model results, could neither be proven nor disproven because of the high amount of shorter-period variability.

Description: The carbon isotopic composition of methane emitted by the Alaskan emergent aquatic plants Arctophila fulva, a tundra mid-lake macrophyte, and Carex rostrata, a tundra lake margin macrophyte, was −58.6 ± 0.5 (n=2) and −66.6±2.5 (n= 6) ‰ respectively. The methane emitted by these species was found to be depleted in 13C by 12‰ and 18‰, relative to methane withdrawn from plant stems 1 to 2 cm below the waterline. As the macrophyte-mediated methane flux represented approximately 97% of the flux from these sites, these results suggest the more rapid transport of 12CH4 relative to 13CH4 through plants to the atmosphere. This preferential release of the light isotope of methane, possibly combined with CH4 oxidation, caused the buildup of the heavy isotope within plant stems. Plant stem methane concentrations ranged from 0.2 to 4.0% ( math formula, 1.4; standard deviation (sd), 0.9; n=28) in Arctophila, with an isotopic composition of −46.1±4.3 ‰ (n = 8). Carex stem methane concentrations were lower, ranging from 150 to 1200 ppm ( math formula, 500; standard deviation, 360; n = 8), with an isotopic composition of −48.3±1.4‰ (n=3). Comparisons of the observed isotopic fractionations with those predicted from gas phase effusion and diffusion coefficients suggest a combination of one or both of these gas transport mechanisms with bulk (non-fractionationating) flow.

Description: Fucoidan, a sulfated polysaccharide in brown seaweed, has various biological activities including anti-tumor activity. We investigated the effects of fucoidan on the apoptosis of human promyeloid leukemic cells and fucoidan-mediated signaling pathways. Fucoidan induced apoptosis of HL-60, NB4, and THP-1 cells, but not K562 cells. Fucoidan treatment of HL-60 cells induced activation of caspases-8, -9, and -3, the cleavage of Bid, and changed mitochondrial membrane permeability. Fucoidan-induced apoptosis, cleavage of procaspases, and changes in the mitochondrial membrane permeability were efficiently blocked by depletion of mitogen-activated protein kinase (MAPK) kinase kinase 1 (MEKK1), and inhibitors of MAPK kinase 1 (MEK1) and c Jun NH2-terminal kinase (JNK). The phosphorylation of extracellular signal-regulated kinase 1/2 (ERK1/2) and JNK was increased in fucoidan-treated HL-60, NB4, and THP-1 cells, but not K562 cells. ERK1/2 activation occurred at earlier times than JNK activation and JNK activation was blocked by MEK1 inhibitor. In addition, fucoidan-induced apoptosis was inhibited by addition of glutathione and/or L-NAME, and fucoidan decreased intracellular glutathione concentrations and stimulated nitric oxide (NO) production. Buthionine-[R,S]-sulfoximine rendered HL-60 cells more sensitive to fucoidan. Depletion of MEKK1 and inhibition of MEK1 restored the intracellular glutathione content and abrogated NO production, whereas inhibition of JNK activation by SP600125 restored intracellular glutathione content but failed to inhibit NO production in fucoidan-treated HL-60 cells. These results suggest that activation of MEKK1, MEK1, ERK1/2, and JNK, depletion of glutathione, and production of NO are important mediators in fucoidan-induced apoptosis of human leukemic cells

Description: Studies of laboratory cultures of Chordaria linearis (Hooker et Harvey) Cotton from southernmost South America revealed that this species has an obligate sexual life history in which a macroscopic sporophyte alternates with a monoecious microscopic gametophyte. Sexual reproduction is isogamous and under photoperiodic control. Gametes are produced only in short days, whereas in long days, asexual zoospores are formed that recycle the gametophyte generation. Unfused gametes develop into gametophytes, and sporophytes originate only from zygotes. Unlike other sexual members of the Chordariales, gametes of C. linearis have a reduced stigma and do not show phototaxis. They are released at the beginning of the night, not in the morning. In nature, C. linearis seems to be regularly infected by a dictyosiphonalean epiphyte resembling the rare arctic species Trachynema groenlandicum (Lund) Pedersen. The epiphyte is responsible for previous contradictory results obtained in laboratory cultures of C. linearis. This is the first record of Trachynema in the southern hemisphere.

Description: The constancy of postmoult/premoult ratios of measures of linear size during ontogeny in insect and other arthropods is widely known as Dyar's rule. We tested this rule in nine species of the waterstrider genera Gerris and Aquarius (Heteroptera: Gerridae), using two size variables: head width and a multivariate measure derived from the pattern of multivariate allometry common to the species considered. Allometric patterns were similar in two independent datasets of laboratory-reared and field-caught specimens. Although our data strictly followed Dyar's rule injust a few instances, all growth ratios varied within a limited range only. Growth ratios for head width differed more between moults than those for multivariate size. The relationship between growth ratios for the two size measures conformed to the predictions based on allometry. We discuss hypotheses of the possible adaptive significance of growth ratios, such as their relation to mobility and systematic differences between hemimetabolous and holometabolous insects, and emphasize the importance of allometry. Since Dyar's rule is consistent with available evidence of physiological mechanisms underlying growth and moulting control of insects and crustaceans, it can be used as a general frame of reference to test alternative growth models.

Description: Until reliable procedures have been developed to preserve the phosphorus contained in particulate matter captured by in situ pumps and sediment traps and until these procedures are applied over a wide range of locations and depths in the sea, indirect methods will have to be used to determine the C/P ratio in marine detritus. We have taken two such approaches: (1) the use of C/N ratios for particulates captured in the upper thermocline in conjunction with 02/P and N/P ratios obtained from deconvolutions of ocean chemical data and (2) regression along isopycnals in the deep‐sea waters free of fossil fuel CO2. While neither approach yields a definitive answer, both suggest that a value of 127 carbon atoms per phosphorus atom would be a more appropriate interim value than that of 106 adopted long ago by A. C. Redfield and his associates.

Description: The Multitracers Experiment studied a transect of water column, sediment trap, and sediment data taken across the California Current to develop quantitative methods for hindcasting paleoproductivity. The experiment used three sediment trap moorings located 120 km, 270 km, and 630 km from shore at the Oregon/California border in North America. We report here about the sedimentation and burial of particulate organic carbon (Corg) and CaCO3. In order to observe how the integrated CaCO3 and Corg burial across the transect has changed since the last glacial maximum, we have correlated core from the three sites using time scales constrained by both radiocarbon and oxygen isotopes. By comparing surface sediments to a two-and-a-half year sediment trap record, we have also defined the modern preservation rates for many of the labile sedimentary materials. Our analysis of the Corg data indicates that significant amounts (20–40%) of the total Corg being buried today in surface sediments is terrestrial. At the last glacial maximum, the terrestrial Corg fraction within 300 km of the coast was about twice as large. Such large fluxes of terrestrial Corg obscure the marine Corg record, which can be interpreted as productivity. When we corrected for the terrestrial organic matter, we found that the mass accumulation rate of marine Corg roughly doubled from the glacial maximum to the present. Because preservation rates of organic carbon are high in the high sedimentation rate cores, corrections for degradation are straightforward and we can be confident that organic carbon rain rate (new productivity) also doubled. As confirmation, the highest burial fluxes of other biogenic components (opal and Ba) also occur in the Holocene. Productivity off Oregon has thus increased dramatically since the last glacial maximum. CaCO3 fluxes also changed radically through the deglaciation; however, they are linked not to CaCO3 production but rather to changes in deepwater carbonate chemistry between 18 Ka and now.

Description: Axial volcanic ridges (AVRs) are found on most slow-spreading mid-ocean ridges and are thought to be the main locus of volcanism there. In this study we present high-resolution mapping of a typical, well-defined AVR on the Mid-Atlantic Ridge at 45°N. The AVR is characterized by “hummocky terrain,” composed typically of hummocks with pillowed or elongate pillowed flanks with pillowed or lobate lava flow summits, often with small haystacks sitting on their highest points. The AVR is surrounded by several areas of “flat seafloor,” composed of lobate and sheet lava flows. The spatial and morphological differences between these areas indicate different eruption processes operating on and off the AVR. Volcanic fissures are found all around and on the AVR, although those with the greatest horizontal displacement are found on the ridge crest and flat seafloor. Clusters of fissures may represent volcanic vents. Extremely detailed comparisons of sediment coverage and examination of contact relations around the AVR suggest that many of the areas of flat seafloor are of a similar age or younger than the hummocky terrain of the AVR. Additionally, all the lavas surveyed have similar degrees of sediment cover, suggesting that the AVR was either built or resurfaced in the same 50 ka time frame as the flat seafloor.

Description: Digital hydrographic data combined with satellite thermal infrared and visible band remote sensing provide a synoptic climatological view of the shallow planktonic environment. This paper uses wind, hydrographic, and ocean remote sensing data to examine southwest monsoon controls on the foraminiferal faunal composition of Recent seafloor sediments of the northwestern Arabian Sea. Ekman pumping resulting in open-ocean upwelling and coastal upwelling create two distinctly different mixed layer plankton environments in the northwestern Arabian Sea during the summer monsoon. Open-sea upwelling to the northwest of the mean July position of the Findlater Jet axis yields a mixed layer environment with temperatures of less than 25°C to about 26.5°C, phytoplankton pigment concentrations between 1.5 and 5.0 mg/m³, and mixed layer depths less than 50 m. Convergence in the Ekman layer in the central Arabian Sea drives the formation of a mixed layer that is greater than 50 m thick, warmer than about 26.5°C, and has phytoplankton pigment concentrations generally below 2.0 mg/m³. Coastal upwelling creates an extremely eutrophic plankton environment that persists over and immediately adjacent to the Omani shelf and undergoes significant offshore transport only within topographically induced coastal squirts. The foraminiferal faunal composition of upper Pleistocene deep-sea sediments of the northwestern Arabian Sea are mainly controlled by vertical nutrient fluxes caused by Ekman pumping, not coastal upwelling. Transfer functions for late Pleistocene mixed layer depth, temperature, and chlorophyll have been obtained through factor analysis and nonlinear multiple regression between late summer mixed layer environment and Recent sediment faunal observations.

Description: This paper provides a detailed hydrographic climatology for the shallow northwestern Arabian Sea prior to and during the southwest monsoon, presented as multiple-year composite vertical hydrographic sections based on National Oceanographic Data Center historical ocean station data. Temperature and salinity measurements are used to infer the water masses present in the upper 500 m. The hydrographic evolution depicted on bimonthly sections is inferred to result from wind-driven physical processes. In the northwestern Arabian Sea the water mass in the upper 50 m is the Arabian Sea Surface Water. Waters from 50 to 500 m are formed by mixing of Arabian Sea Surface Water with Antarctic and Indonesian intermediate waters. The inflow of Persian Gulf Water does not significantly influence the hydrography of the northwestern Arabian Sea along the Omani coast. Nitrate has a high inverse correlation with temperature and oxygen in the premonsoon thermocline in the depth interval 50–150 m. During the southwest monsoon, coastal upwelling off Oman and adjacent offshore upward Ekman pumping alter the shallow hydrography.

Description: The Norwegian Atlantic Current (NwAC) and its eddy field are examined using data from surface drifters. The data set used spans nearly 20 years, from June 1991 to December 2009. The results are largely consistent with previous estimates, which were based on data from the first decade only. With our new data set, statistical analysis of the mean fields can be calculated with larger confidence. The two branches of the NwAC, one over the continental slope and a second further offshore, are clearly captured. The Norwegian Coastal Current is also resolved. In addition, we observe a semipermanent anticylonic eddy in the Lofoten Basin, a feature seen previously in hydrography and in models. The eddy kinetic energy (EKE) is intensified along the path of the NwAC, with the largest values occurring in the Lofoten Basin. The strongest currents, exceeding 100 cm s−1, occur west of Lofoten. Lateral diffusivities were computed in five domains and ranged from 1–5 × 107 cm2 s−1. The Lagrangian integral time and space scales are 1–2 days and 7–23 km, respectively. The data set allows studies of seasonal and interannual variations as well. The strongest seasonal signal is in the NwAC itself, as the mean flow strengthens by approximately 20% in winter. The EKE and diffusivities on the other hand do not exhibit consistent seasonality in the sampled regions. There are no consistent indications of changes in either the mean or fluctuating surface velocities between the 1990s and 2000s.

Description: The ultimate cause of the onset of glaciations remains elusive, but in the case of northem hemisphere glaciation it is probable that several factors acted in combination. General global cooling resulted from reduction of atmospheric C02 by weathering of silicate rocks exposed by erosion of late Cenozoic uplifts. Uplifts in south Asia, southwestern North America and Scandinavia occurred at distances appropriate for the generation of quasi-permanent Rossby waves in the atmosphere. The resulting winds, given suitable moisture sources, were favourable for causing large-scale precipitation at mid-latitudes on the northern continents. Moisture sources were provided by the closure of the Central American isthmus. Gulf Stream flow increased, carrying warm subtropical waters to high latitudes. The Denmark Strait deepened permitting greater outflow of deep water from the Norwegian-Greenland Sea. The relative importance of each of these factors should be investigated by additional atmospheric and ocean climate model sensitivity studies.

Description: The biological variability of the northwestern Arabian Sea during the 1979 southwest monsoon has been investigated by the synthesis of satellite ocean color remote sensing with analysis of in situ hydrographic and meteorological data sets and the results of wind-driven modeling of upper ocean circulation. The phytoplankton bloom in the northwestern Arabian Sea peaked during August-September, extended from the Oman coast to about 65°E, and lagged the development of open-sea upwelling by at least 1 month. In total, the pigment distributions, hydrographic data, and model results all suggest that the bloom was driven by spatially distinct upward nutrient fluxes to the euphotic zone forced by the physical processes of coastal upwelling and offshore Ekman pumping. Coastal upwelling was evident from May through September, yielded the most extreme concentrations of phytoplankton biomass, and along the Arabian coast was limited to the continental shelf in the promotion of high concentrations of phytoplankton. Upward Ekman pumping to the northwest of the Somali Jet axis stimulated the development of a broad open-sea phytoplankton bloom oceanward of the Oman shelf. Vertical mixing during the 1979 southwest monsoon was apparently not a primary cause of the regional-scale phytoplankton bloom.

Description: Forazoline A, a novel antifungal polyketide with in vivo efficacy against Candida albicans, was discovered using LCMS-based metabolomics to investigate marine-invertebrate-associated bacteria. Forazoline A had a highly unusual and unprecedented skeleton. Acquisition of 13C–13C gCOSY and 13C–15N HMQC NMR data provided the direct carbon–carbon and carbon–nitrogen connectivity, respectively. This approach represents the first example of determining direct 13C–15N connectivity for a natural product. Using yeast chemical genomics, we propose that forazoline A operated through a new mechanism of action with a phenotypic outcome of disrupting membrane integrity.

Description: Samples collected at hourly intervals on May 18–19, 1980, at three sites 200 km downwind from Mount St. Helens, have made possible a detailed reconstruction of the conditions that contribute to the compositional heterogeneity of mineral and glass components observed in distal tephra layers. The air fall tephra deposited at the sites during the first 7 hours of the May 18 eruption is mostly coarse grained, microlite-rich, nonjuvenile glass and feldspar. Grain-size maxima in this initial tephra can be related to the cataclysmic blast at 0832 and a subsequent pulse of the eruption at 1200. Juvenile, microlite-free glass increases in relative abundance at the sampling sites beginning at about 1900. Such a change between nonjuvenile and juvenile tephra can be related to a 5-km increase in column height associated with the last major pulse of the eruption which occurred at 1700 at the volcano. Electron microprobe study of both microlite-rich and microlite-free pumice in the time series samples reveals significant compositional differences. Interstitial glass in nonjuvenile pumice deposited during the first few hours at the sampling sites is enriched in SiO2 and K2O and depleted in TiO2, FeO*, and MgO relative to juvenile glass. By comparison, major element composition of the least evolved juvenile glass sampled during the last several hours of the eruption displays a slight trend toward less evolved composition. Least squares calculations suggest that the more evolved character of the nonjuvenile glass can be explained by greater fractional crystallization brought about by enhanced cooling in a cryptodome prior to eruption, whereas the temporal changes observed in juvenile glass composition during the last several hours of the eruption suggest the presence of a small, slightly zoned magma chamber at depth. Electron microprobe study of glass-coated ilmenites, magnetites, and plagioclases provides the following estimates of the physical conditions in this reservoir: 865°±50°C, PH2O = 2.2 kbar and -log ƒO2 = 11.7. Analyses of bulk pumice, glass and selected mineral phases from May 25, June 12, July 22, and October 16–18 pumices erupted from Mount St. Helens indicate that the bulk pumice (magma) compositions have become slightly more andesitic with time, while mineral and co-existing glass compositions have changed significantly in post-May 18 eruptions with both being more highly evolved than those associated with the May 18 eruption. An application of the magnetite-ilmenite geothermometer to June 12 and July 22 samples indicates temperatures of 919°±30°C and 930°±50°C, respectively. Least squares calculations suggest that such evolved post-May 18 glass and mineral phases can be derived by fractional crystallization of a magma composition like bulk May 18 pumice into approximately 50% crystals and 50% residual liquid. Such partitioning between crystals and residual liquid appears to have occurred on the scale of centimeters and is interpreted as a consequence of accelerated crystallization under reduced water pressure.

Description: In accretionary wedges, often morphologically similar sedimentary intrusions, when observed by remote geophysical means, may have one of two quite different driving mechanisms and a highly variable significance for the regional hydrogeologic picture. For example, mud diapirs are driven by buoyancy forces that arise from bulk density contrasts. In them, mud and pore fluid upwell en masse and fluid migration is a related (sometimes important) but generally subsidiary process. In contrast, diatremes contain sediments fluidized during rapid fluid advection and are forcibly and directly driven by the hydrogeologic system. The nature of fluid input from local and exotic source regions can, therefore, strongly affect sedimentary intrusive processes and vice versa. This complicates the process of defining the main features of the hydrogeological systems operating in accretionary wedges. Focused vertical advection through steep sided (piercement) mud diapirs requires conduit systems, otherwise flow will be diffuse and directed more horizontally out of the low-permeability mud mass. However, where the permeability of the overburden is less than that of the diapir, the whole diapir may act as a conduit. Apart from this special case, conduits will be associated with highly anisotropic scaly fabrics that can sometimes develop in the marginal shear zone of diapirs. Scaly fabrics form during deformation and compaction of a mud matrix under conditions of constant or increasing effective stress. However, the effective stress path can be complex as it is both controlled by the relative rates of upward intrusion and burial (by sedimentation and/or structural thickening) and the hydrogeologic system. Due to this, it appears likely that even in a geographically related group of diapirs, effective stress histories will vary widely between intrusions so that some can form advective pathways for fluids and some cannot. Mixed systems of behavior may also be present with local diatremes developing within diapirs above the terminations of conduit systems and rapidly expanding methane gas pockets. The potentially heterogeneous near-surface behavior may be why the surface manifestations of sedimentary intrusions are so variable when observed in the field. Diatremes can also form separately as large primary features above any structural or stratigraphic conduit that rapidly expels water or gas into the base of an unlithified sediment column. When active, large diatremes require enormous quantities of fluid (water or gas) to drive them, particularly if they are long lived features and hence are a direct indication of at least an episodically vigorous hydrogeologic system.

Description: King Penguins are the second largest of all diving birds and share with their congener, Emperor Penguins, breeding habits strikingly different from other penguins. Our purpose was to determine the feeding behavior, energetics of foraging and the prey species, and compare these to other sympatric species of subantarctic divers. We determined: (1) general features of foraging behavior using time—depth recorders, velocity meters, and radio transmitters, (2) energetics by doubly labeled water, (3) food habits and energy content from stomach lavage samples, and (4) resting and swimming metabolic rate by oxygen consumption measurements. The average foraging cycle was ≈6 d, during which the mass gain of 30 birds was ≈2 kg. When at sea, the birds exhibit a marked pattern of shallow dives during the night, whereas deep dives of 〉100 m only occurred during the day. Maximum depth measured from 34 birds and 18 537 dives was 304 m, and maximum dive duration from 23 birds and 11 874 dives was 7.7 min. The frequency distribution of dive depth was bimodal, with few dives between 40 and 100 m. Overall, swim velocities when a bird was at sea averaged 2.1 m/s (N = 5), while descent and ascent rates of change in depth averaged 0.6 m/s for dives 〈60 m (N = 74) and 1.4 m/s for dives 〉150 m (N = 90). Night feeding dives occurred at a rate of ≈20 dives/h, and deep dives occurred at a rate of ≈5 dives/h. The energy consumption rate while resting ashore was 3.3 W/kg (N = 3) or 1.6 times the predicted standard metabolic rate (SMR). The average energy consumption rate while away from the colony was 10 W/kg (N = 8) or 4.6 x SMR, compared to 4.3 x SMR estimated from a time—energy budget. The latter value is based on an average metabolic rate of 4.2 W/kg for three birds while resting in 5°C water and 9.6 W/kg while swimming at 2 m/s, which was extrapolated from the average of three birds swimming at 1 m/s. The average energy intake based on 9 stomach content samples was nearly 24.6 kJ/g dry mass. The main prey by number are myctophid fish of the species Krefftichthys anderssoni and Electrona carlsbergi. It was concluded that: (1) feeding begins ≈28 km from the colony, (2) prey is pursued night and day through its vertical movements, (3) vertical distribution of the prey is reflected closely by diving habits of the birds, (4) deep—diving, for unknown reasons, is an important component of foraging success, (5) diving capacities of King Penguins are remarkable compared to other birds and many pinnipeds, and (6) calculated foraging energetics can be closely estimated from time—energy budgets.

Description: Direct estimations of turbulent fluxes and atmospheric stability were performed from a sonic anemometer at 50 m height on a meteorological mast at the Horns Rev wind farm in the North Sea. The stability and flux estimations from the sonic measurements are compared with bulk results from a cup anemometer at 15 m height and potential temperature differences between the water and the air above. Surface flux estimations from the advanced weather research and forecast (WRF) model are also validated against the sonic and bulk data. The correlation between the sonic and bulk estimates of friction velocity is high and the highest among all velocity comparisons. From the sonic–bulk–WRF inter-comparison, it is found that the atmospheric stability measures at the sonic height tend to be closer to the neutral value than the WRF and bulk estimates, which are performed within an air layer closer to the surface, not only from a systematic bulk and WRF under-prediction of the friction velocity when compared with the sonic value but also because of the lower magnitude of the sonic heat flux compared with that from the WRF simulations. Although they are not measured but parameterized or estimated, the bulk–WRF comparisons of friction velocity and 10 m wind speed show good agreement. It is also shown that on a long-term basis, the WRF and bulk estimates of stability are nearly equal and that a correction towards a slightly stable atmospheric condition has to be applied to the long-term wind profile at Horns Rev and at other locations over the North Sea, the correction being larger for points close to the coast.

Description: Mutations or environmental factors that result in reversal of conspicuous left–right asymmetries provide an opportunity to study developmental mechanisms. They may also provide insight into evolutionary changes in asymmetry states within and between species. King crabs (family Lithodidae) have a larger right claw and females typically exhibit a dextrally offset abdomen. Nevertheless, I observed a high incidence of left handedness in laboratory reared box crabs (Lopholithodes foraminatus) and captured the first known egg-bearing female lithodid to exhibit reversed asymmetry. This provided a unique opportunity to characterize the reversed phenotype and to compare the incidence of reversed asymmetry in the offspring of normal and reversed females. Asymmetry of the chelae became apparent in the first postzoeal stage (glaucothoe) and handedness was maintained through subsequent instars. Females with larger left claws developed reversed abdominal asymmetry by the fourth crab stage. No reversed asymmetry was observed in the mandibles of zoea larvae or juveniles of either handedness. The incidence of reversed asymmetry in glaucothoe reared from one reversed and three normal females was high (between 20% and 30%), and independent of maternity (P=0.67). Removal of the right cheliped of fourth stage zoeae, and the major cheliped of glaucothoe, did not reverse the direction of asymmetry. Elevated larval rearing temperature also did not affect the frequency of reversed individuals. This lack of evidence for either heritability or induction of handedness is enigmatic. Further investigation of reversed asymmetry in lithodid crabs may provide valuable insights into the development and evolution of bilateral asymmetries.

Description: The well-known caldera of Thira (Santorini), Greece, was not formed during a single eruption but is composed of two overlapping calderas superimposed upon a complex volcanic field that developed along a NE trending line of vents. Before the Minoan eruption of 1400 B.C., Thira consisted of three Java shields in the northern half of the island and a flooded depression surrounded by tuff deposits in the southern half. Andesitic lavas formed the overlapping shields of the north and were contemporaneous with and, in many places, interbedded with the southern tuff deposits. Although there appears to be little difference between the composition of magmas erupted, differences in eruption style indicate that most of the activity in the northern half of the volcanic field was subaerial, producing lava flows, whereas in the south, eruptions within a flooded depression produced a sequence of mostly phreatomagmatic tuffs. Many of these tuffs are plastered onto the walls of what appears to have been an older caldera, most probably associated with an eruption of rhyodacitic tephra 100,000 years ago. The Minoan eruption of about 1400 B.C. had four distinct phases, each reflecting a different vent geometry and eruption mechanism. The Minoan activity was preceded by minor eruptions of fine ash. (1) The eruption began with a Plinian phase, from subaerial vent(s) located on the easternmost of the lava shields. (2) Vent(s) grew toward the SW into the flooded depression. Subsequent activity deposited large-scale base surge deposits during vent widening by phreatomagmatic activity. (3) The third eruptive phase was also phreatomagmatic and produced 60% of the volume of the Minoan Tuff. This activity was nearly continuous and formed a large featureless tuff ring with poorly defined bedding. This deposit contains 5–40% lithic fragments that are typical of the westernmost lava shield and appears to have been erupted when caldera collapse began. (4) The last phase consisted of eruption of ignimbrites from vent(s) on the eastern shield, not yet involved in collapse. Collapse continued after eruption of the ignimbrites with foundering of the eastern half of the caldera. Total volume of the collapse was about 19 km3, overlapping the older caldera to form the caldera complex visible today. Intracaldera eruptions have formed the Kameni Islands along linear vents concomitant with vents that may have been sources for the Minoan Tuff.

Description: Eutrophication, coupled with loss of herbivory due to habitat degradation and overharvesting, has increased the frequency and severity of macroalgal blooms worldwide. Macroalgal blooms interfere with human activities in coastal areas, and sometimes necessitate costly algal removal programmes. They also have many detrimental effects on marine and estuarine ecosystems, including induction of hypoxia, release of toxic hydrogen sulphide into the sediments and atmosphere, and the loss of ecologically and economically important species. However, macroalgal blooms can also increase habitat complexity, provide organisms with food and shelter, and reduce other problems associated with eutrophication. These contrasting effects make their overall ecological impacts unclear. We conducted a systematic review and meta-analysis to estimate the overall effects of macroalgal blooms on several key measures of ecosystem structure and functioning in marine ecosystems. We also evaluated some of the ecological and methodological factors that might explain the highly variable effects observed in different studies. Averaged across all studies, macroalgal blooms had negative effects on the abundance and species richness of marine organisms, but blooms by different algal taxa had different consequences, ranging from strong negative to strong positive effects. Blooms' effects on species richness also depended on the habitat where they occurred, with the strongest negative effects seen in sandy or muddy subtidal habitats and in the rocky intertidal. Invertebrate communities also appeared to be particularly sensitive to blooms, suffering reductions in their abundance, species richness, and diversity. The total net primary productivity, gross primary productivity, and respiration of benthic ecosystems were higher during macroalgal blooms, but blooms had negative effects on the productivity and respiration of other organisms. These results suggest that, in addition to their direct social and economic costs, macroalgal blooms have ecological effects that may alter their capacity to deliver important ecosystem services.

Description: Transfer of the small gaseous molecules CO2 and NH3 across biological membranes, long thought to occur solely by simple diffusion, is now known to be facilitated by members of two multigene families: aquaporins (AQP) and rhesus (Rh) proteins. Although it is accepted that AQP1 and Rh proteins are involved in CO2 and NH3 transfer, respectively, the idea that a single channel can exhibit selectivity for both gases is controversial. Indeed, studies using the same in vitro model (human red blood cells) have provided evidence both for and against a role for Rh proteins as CO2 channels. Thus, this study was initiated to provide in vivo evidence for a dual function of Rh proteins as ammonia and CO2 channels. Here, we show that in zebrafish (Danio rerio), direct ammonia–CO2 competition experiments in adults or translational knockdowns of Rh proteins in larvae affects both ammonia and CO2 excretion. These results suggest that Rh proteins in zebrafish may be common pathways for transport of ammonia and CO2.

Description: Seismic techniques provide the highest-resolution measurements of the structure of the crust and have been conducted on a worldwide basis. We summarize the structure of the continental crust based on the results of seismic refraction profiles and infer crustal composition as a function of depth by comparing these results with high-pressure laboratory measurements of seismic velocity for a wide range of rocks that are commonly found in the crust. The thickness and velocity structure of the crust are well correlated with tectonic province, with extended crust showing an average thickness of 30.5 km and orogens an average of 46.3 km. Shields and platforms have an average crustal thickness nearly equal to the global average. We have corrected for the nonuniform geographical distribution of seismic refraction profiles by estimating the global area of each major crustal type. The weighted average crustal thickness based on these values is 41.1 km. This value is 10% to 20% greater than previous estimates which underrepresented shields, platforms, and orogens. The average compressional wave velocity of the crust is 6.45 km/s, and the average velocity of the uppermost mantle (Pn velocity) is 8.09 km/s. We summarize the velocity structure of the crust at 5-km depth intervals, both in the form of histograms and as an average velocity-depth curve, and compare these determinations with new measurements of compressional wave velocities and densities of over 3000 igneous and metamorphic rock cores made to confining pressures of 1 GPa. On the basis of petrographic studies and chemical analyses, the rocks have been classified into 29 groups. Average velocities, densities, and standard deviations are presented for each group at 5-km depth intervals to crustal depths of 50 km along three different geotherms. This allows us to develop a model for the composition of the continental crust. Velocities in the upper continental crust are matched by velocities of a large number of lithologies, including many low-grade metamorphic rocks and relatively silicic gneisses of amphibolite facies grade. In midcrustal regions, velocity gradients appear to originate from an increase in metamorphic grade, as well as a decrease in silica content. Tonalitic gneiss, granitic gneiss, and amphibolite are abundant midcrustal lithologies. Anisotropy due to preferred mineral orientation is likely to be significant in upper and midcrustal regions. The bulk of the lower continental crust is chemically equivalent to gabbro, with velocities in agreement with laboratory measurements of mafic granulite. Garnet becomes increasingly abundant with depth, and mafic garnet granulite is the dominant rock type immediately above the Mohorovicic discontinuity. Average compressional wave velocities of common crustal rock types show excellent correlations with density. The mean crustal density calculated from our model is 2830 kg/m3, and the average SiO2 content is 61.8%.

Description: Metagenomic techniques are used to analyse bacterial communities allowing both culturable and unculturable species to be represented. However, the screening of oral metagenomic samples can be hindered by high animal host DNA content. This study evaluated methods for the reduction of human DNA concentrations within oral metagenomic samples. Plaque samples were collected from 27 patients presenting with periodontal disease and treated to remove human DNA using either selective lysis of eukaryotic cells at several buffer concentrations or differential centrifugation after treatment with trypsin and/or detergents. Human and bacterial DNA levels were determined by quantitative polymerase chain reaction (qPCR). The human DNA content of plaque extracts was significantly reduced by all treatments compared with an untreated control (P 〈 0.05). However, differential centrifugation simultaneously reduced the bacterial DNA content unless samples were pretreated with a detergent. Observations of Gram stained samples that were processed using differential centrifugation without detergent suggest that many bacteria remain adhered to human cells. An approach that uses differential centrifugation in parallel with selective lysis is recommended to fully represent the oral microbiota in metagenomic samples, including those tightly adhered to human cells and more delicate bacteria such as Mycoplasma.

Description: Hydrographic data of temperature, salinity, oxygen, nitrate, phosphate, and silicate at 81 stations with 435 samples on 3 sections between the Azores, the Grand Banks of Newfoundland, and the Bermuda Islands are used to determine the mixing of water masses by optimum multiparameter analysis over the depth range 100–1500 m. The method optimally utilizes all information from our hydrographic data set by solving an overdetermined set of linear mixing equations for all parameters using the method of least squares residuals. It is shown that the method gives quantitative information on the influence of the various water masses of the western North Atlantic. The Gulf Stream and the North Atlantic Current appear as broad bands transporting large amounts of Western North Atlantic Central Water at their warm flank. Western Subarctic Intermediate Water and Shelf Water supplied by the Labrador Current and containing significant amounts of Labrador Current Water are found on their inshore side. The area of the Azores front is found in the vicinity of the Comer Seamounts, where the uniform water mass distribution of the Sargasso Sea changes into a more complex structure that reflects the influence of water masses originating in the Labrador Sea. Small-scale structures, like eddies or Gulf Stream rings, are also detectable by this analysis method. Comparison with dynamic height analysis supports the circulation pattern of the North Atlantic Current as a continuation of the Gulf Stream, and of the southeastward flowing Azores Current originating in the area of the Southeast Newfoundland Rise.

Description: Measurements made with satellite-tracked buoys drogued in different layers between the sea surface and 30-m depth under homogeneous winter conditions in the North Sea allow analysis of the Ekman currents under a large variety of wind conditions. The experiment lasted from November 20, 1991, until February 29, 1992. The first 4 weeks of this period, during which the buoys stayed close together, are used to determine the Ekman stresses. The total current field is a superposition of barotropic currents due to sea level variations and Ekman currents. The classical Ekman theory is not able to describe properly the observed deflection of the currents to the right of the wind direction and their decay with depth. This deflection is 10° near the sea surface and increases to approximately 50° in 25-m depth. The relation between wind stress and the stress field in the interior of the water is given by a tensor, which describes the rotation and the variation of the stress with increasing depth. The concept of eddy viscosity is applicable, if a viscosity tensor is used to relate stress and vertical shear. The viscosity tensor is a function of the vertical coordinate only and is independent from the wind stress. It shows maximum values in 15- to 20-m depth and may be due to Langmuir circulation cells. Further studies are needed to determine the physics of this tensor. Its magnitude in the interior of the mixed layer exceeds 1000 cgs units. Consequently, Ekman currents are weak and may not be the dominant currents within the mixed layer.

Description: Routine oxygen consumption of turbot, Scophthalmus maximus, was determined in relation to temperature, salinity, body wet weight, and time of day. The highest routine oxygen consumption rates measured roughly followed a arabolic curve over the temperature range tested (8 to 24°C). The lowest rates showed a more linear refationship over the same temperature range. It is argued that lowest rates correspond to the standard oxygen consumption. Between 16 and 19°C, routine oxygen consumption reached a maximum. It is suggested that these temperatures correspond to the preferred ternerature of the species and are within the range of optimum temperature for growth of specimens weigkng about 100 g. Salinity effect on oxygen consumption rates was studied in five groups acclimated over 4 weeks to 8, 15, 22, 29, and 35%. salinity. Routine oxygen consumption rates were lowest at 8% salinity with no significant differences in higher acclimation salinities. Routine respiration of turbots showed conspicuous daily fluctuations. During spring, summer, and autumn, oxygen Consumption was higher during morning hours and at night. In winter, higher rates were measured only once (during morning and early afternoon). The relationship between routine oxygen consumption and body weight of turbots followed an exponential function with a slope of 0.7, which was lower compared to the slope of 0.8 usually given for roundfish-species.

Description: Haplogloia andersonii (Farlow) Levring is an anti-tropical species that occurs on cold and warm-temperate Pacific coasts of both Americas. In its habit it resembles the subantarctic species Chordaria linearis (Hooker et Harvey) Cotton. Culture studies show that the species differ in morphology and ecophysiology of their microscopic gametophytes and in gamete behavior. Details of sporophyte anatomy are presented that also allow the distinction of field plants. In South America, H. andersonii occurs only on the Pacific coast, from central Perú (14°S) to southern Chile (50°S). Chordaria linearis occurs on the Pacific coast from Chiloé Island (43°S) to Cape Horn (56°S). In the shared area the species may co-occur. On the Atlantic coast, C. linearis was newly collected at a locality in northern Patagonia (41°S). In addition, C. linearis occurs in Antarctica. Haplogloia moniliformis Richer, recently described from Macquarie Island, is probably synonymous with Chordaria linearis.

Description: We examined the temperature tolerance of microscopic phases from geographically disjunct isolates of eight species or closely related, putatively conspecific taxa of temperate brown algae with disjunct distributions. Maximum within-taxon differences were small and ranged from 1.6° to 4.3° C. Desmarestia aculeata and Sphaerotrichia divaricata, both with northern hemisphere amphioceanic distributions, showed little or no significant intraspecific variation between the mean upper survival limits (USL) of Atlantic and Pacific strains (δUSL ≤ 1.4°C), which would agree with a relatively recent separation of the respective populations. Among the plants with bipolar distributions, there was likewise very little difference (δUSL 0–1.1°C) between northern and southern hemisphere strains in Striaria attenuata and in the species pair Desmarestia viridis/D. willii. In Desmarestia ligulata, and in the species pairs Desmarestia firma/D. munda, Dictyosiphon foeniculaceus/D. hirsutus, and Scytothamnus australis/Scytothamnus sp., significant differences occurred, which indicate longer divergence times. δUSL in these cases ranged from 1.7° to 2.7°C, without overlap between strains from the northern and southern hemispheres. All species that passed the equator during cooler epochs had a USL of 26–27°C, at least in some geographical isolates. The NE Asian kelp Undaria pinnatifida, which passed the equator in recent times, had a USL of 29.6°C. We hypothesize that the mechanism of spreading in the amphipolar species studied was migration of vegetative microthalli. The more unlikely alternative hypothesis of continuous populations through the tropics during a cooler epoch would imply a drop in seawater temperatures to approximately 20° C in summer and 15° C in winter, which is not supported by paleoclimatic evidence.

Description: The evolution of internal structure plays a pivotal role in the macroscopic response of granular materials to applied loads. A case in point is the so‐called ‘stress–dilatancy relation’, a cornerstone of Soil Mechanics. Numerous attempts have been made to unravel the connection between stress–dilatancy and the evolution of fabric and contact forces in a deforming granular medium. We re‐examine this connection in light of the recent findings on force chain evolution, in particular, that of collective force chain failure by buckling. This study is focussed on two‐dimensional deformation of dense granular assemblies. Analysis of individual and collective force chain bucklings is undertaken using data from a discrete element simulation. It is shown that the kinematics of force chain buckling lead to significant levels of local dilatation being developed in the buckling force chain particles and their confining first‐ring neighbors. Findings from the simulation are used to guide the development of a lattice model of collective, localized force chain buckling. Consideration of the statics and kinematics of this process yields a new stress–dilatancy relation. The physics of buckling, even at its simplest form, introduces a richness into the stress–dilatancy formulation in a way that preserves the essential aspects of fabric evolution, specifically the buckling mode.

Description: Marine myxobacteria (Enhygromyxa, Plesiocystis, Pseudoenhygromyxa, Haliangium) are phylogenetically distant from their terrestrial counterparts. Salimabromide is the first natural product from the Plesiocystis/Enhygromyxa clade of obligatory marine myxobacteria. Salimabromide has a new tetracyclic carbon skeleton, comprising a brominated benzene ring, a furano lactone residue, and a cyclohexane ring, bridged by a seven-membered cyclic moiety. The absolute configuration was deduced from experimental and calculated CD data. Salimabromide revealed antibiotic activity towards Arthrobacter cristallopoietes.

Description: We present a conceptual model of fluid circulation in a ridge flank hydrothermal system, the Mariana Mounds. The model is based on chemical data from pore waters extracted from piston cores and from push cores collected by deep-sea research vessel Alvin in small, meter-sized mounds situated on a local topographic high. These mounds are located within a region of heat flow exceeding that calculated from a conductive model and are zones of strong pore water upflow. We have interpreted the chemical data with time-dependent transport-reaction models to estimate pore water velocities. In the mounds themselves pore water velocities reach several meters per year to kilometers per year. Within about 100 m from these zones of focused upflow velocities decrease to several centimeters per year up to tens of centimeters per year. A larger area of low heat flow surrounds these heat flow and topographic highs, with upwelling pore water velocities less than 2 cm/yr. In some nearby cores, downwelling of bottom seawater is evident but at speeds less than 2 cm/yr. Downwelling through the sediments appears to be a minor source of seawater recharge to the basaltic basement. We conclude that the principal source of seawater recharge to basement is where basement outcrops exist, most likely a scarp about 2–4 km to the east and southeast of the study area.

Description: Cormorants, Phalacocorax spp., have great potential to affect recreational fisheries and have increased substantially in abundance over the last decades in UK inland waters. Fabricated refuges provide a potential means of reducing fish losses, yet the benefits of such structures may be marginal if natural shelters are abundant and favoured, or if strong density-dependence limits refuge use. This study examined the efficacy of artificial shelters in mesocosm enclosures that allowed standardised and replicated observations of roach, Rutilus rutilus (L.), distribution. When given a choice between occupying open water, simulated reedbeds and artificial brushwood shelters, roach used brushwood shelters extensively across a range of fish densities. When fish had a choice of occupying open water or reedbeds offering no overhead cover, they actively avoided reedbeds and used open water almost exclusively. Occupation of reedbeds was positively related to the amount of overhead cover they provided. When artificial brushwood shelters and reedbeds offered complete overhead cover, brushwood shelters were occupied twice as much as reedbeds. Artificial shelters may therefore have wide application in stillwaters with abundant reedbeds unless the reedbeds are coupled with extensive overhead cover.

Description: During a 10-year study more than 2,000 phytoplankton samples were collected from the entire coast of Peru and analyzed. In general, diatoms were the most abundant group of organisms in all seasons. Predominant species were Rhizosolenia delicatula, Skeletonema costatum Thalassiosira subtilis, Thalassionema nitzschioides and several species of the genus Chaetooeros. Dinoflagellates and flagellates were observed frequently during summer. The mean distribution of the phytoplankton concentration during the 10 years shows the existence of several centers with higher cell densities along the coast, coinciding with the areas of more intense and persistent upwelling. Four major centers have been identified: Pimentel (˜6°S), Chimbote (˜9°S), Callao (˜12°S), and Tambo de Mora-Pisco (˜15°S); and two minor centers, Talara (˜4°S) and Ilo (˜17°S). The relative importance of each center seems to change according to the season. The highest phytoplankton concentration tended to be in the northern part of the coast during fall and winter and in the south through spring and summer.

Description: Methane is a potent greenhouse gas and large-scale rapid release of methane from hydrate may have contributed to past abrupt climate change inferred from the geological record. The discovery in 2008 of over 250 plumes of methane gas escaping from the seabed of the West Svalbard continental margin at ~400 m water depth (mwd) suggests that hydrate is dissociating in the present-day Arctic. Here we model the dynamic response of hydrate-bearing sediments over a period of 2300 years and investigate ocean warming as a possible cause for present-day and likely future dissociation of hydrate, within 350–800 mwd, west of Svalbard. Future temperatures are given by two climate models, HadGEM2 and CCSM4, and scenarios, Representative Concentration Pathways (RCPs) 8.5 and 2.6. Our results suggest that over the next three centuries 5.3–29 Gg yr−1 of methane may be released to the Arctic Ocean on the West Svalbard margin.

Description: This article compares the quality of Raman images obtained using metallurgical and oil immersion objectives to map complex structures in two and three dimensions. While the performance of these objectives for depth profiling planar structures has been discussed at length in the literature, the same comparison has not yet been made for 3D mapping of complex objects, where additional complications are introduced by non-planar geometries. Studying samples with increasing complexity shows that the oil immersion objective is strongly preferred because it yields brighter images with better contrast, and eliminates some new and confusing artefacts that do not arise with simple planar objects.

Description: Although it has been more than 30 years since the discovery of deep-sea hydrothermal vents, comprehending the interconnections between hydrothermal venting and microbial life remains a challenge. Here we investigate abiotic-biotic linkages in low-temperature hydrothermal biotopes at Desperate and Lilliput on the southern Mid-Atlantic Ridge. Both sites are basalt-hosted and fluids exhibit the expected chemical signatures. However, contrasting crustal permeabilities have been proposed, supporting pervasive mixing at Desperate but restricting circulation at Lilliput. In Desperate fluids, sulfide and O2 were readily available but H2 hardly detectable. Under incubation conditions (oxic unamended, sulfide-spiked, oxic and anoxic H2 -spiked at 18°C), only sulfide oxidation by Thiomicrospira fuelled biomass synthesis. Microbial phylogenies from Desperate incubation experiments resembled those of the natural samples suggesting that the incubation conditions mimicked the environment. In Lilliput fluids, O2 was limited, whereas sulfide and H2 were enriched. Autotrophy appeared to be stimulated by residual sulfide and by amended H2 . Yet, based on bacterial phylogenies only conditions in anoxic H2 -spiked Lilliput incubations appeared similar to parts of the Lilliput habitat. In anoxic H2 -spiked Lilliput enrichments Campylobacteraceae likely supported biomass production through H2 oxidation. We argue that the diverging circulation patterns arising from different subseafloor permeabilities act as major driving forces shaping these biotope structures.

Description: Aftershocks of shallow earthquakes larger than magnitude 7 in the Aleutians, southern Alaska, southeast Alaska, and offshore British Columbia from 1920 to 1970 were relocated by computer in an attempt to delineate the rupture zones of large earthquakes. Plate tectonic theory indicates that gaps in activity for large earthquakes for the past 10's to 100's of years are likely sites of future large earthquakes. Three prominent gaps of this type are delineated: one in southeast Alaska; another in southern Alaska near the epicenters of the great earthquakes of 1899 and 1900; and one in the far western Aleutians. These gaps deserve high priority for study and instrumentation. Large earthquakes appear to be much more regular than smaller shocks in their distributions with respect to space, time, and size. Aftershock zones of events since 1930 that are larger than magnitude 7.8 are longer than 250 km and those less than 7.5 are shorter than 125 km. The rupture zones of events that occurred before 1930 could not be delineated from aftershock locations. Aftershock zones of large earthquakes tend to abut without significant overlap even for rupture zones as long as 1200 km. Nearly the entire Alaska-Aleutian zone from 145°W to 171°E has broken since 1938 in a series of large earthquakes. The rupture zones of five large events appear to form a space-time sequence that progressed from 155°W in 1938 to 171°E in 1965. This sequence is much like the well-known westward progression of activity since 1939 along the North Anatolian fault. Shocks with long rupture zones tend to occur along those parts of the Alaska-Aleutian zone that are relatively simple tectonically. The ends of many aftershock zones of large earthquakes are located at the intersection of major transverse features with the Aleutian arc. Large earthquakes rarely, if ever, reoccur along the same part of a fault zone in less than several tens of years, i.e. within a time less than that for substantial strain accumulation. Events of comparable magnitude that occur soon after some great earthquakes usually involve rupture in a region adjacent to but different from that of the main shock. The March 30, 1965, earthquake of magnitude 7.5, which involved normal faulting in the Aleutian trench, appears to have been triggered by thrust faulting along the adjacent inner margin of the trench in the magnitude 7.9 earthquake of February 4, 1965. Large events of the thrust type are commonly followed within ten years by events involving normal faulting in the adjacent part of the trench. Estimates of average displacements and of the repeat times of great earthquakes from measurements of 20-sec surface waves are systematically too small and do not agree with the meager historic record of great shocks. Other estimates of repeat times vary from 30 to 850 years, but neither of these extremes appears to be typical. The aftershock zone of the April 1, 1946, Aleutian earthquake, which generated one of the largest and most widespread seismic sea waves in the Pacific during this century, was very small. A large displacement of the ocean floor may be responsible for the generation of the large sea wave. An average displacement of 2.4 to 4.1 meters was calculated from amplitudes of 100-sec waves.

Description: We measured the respiratory isotope effect ϵresp for seven representative unicellular marine organisms. The bacterium Pseudomonas halodurans, the diatom Phaeodactylum tricornutum, the phytoflagellates Cryptomonas baltica and Dunaliella tertiolecta, the heterotrophic flagellates Paraphysomonas imperforata and Bodo sp., and the ciliate Uronema sp. exhibit ϵresp values in the range 14-26‰. We also measured ϵresp for three metazoans. The ϵresp for the copepod Acartia tonsa ranged from 17 to 25‰, while two larger organisms, the mollusk Mercenaria mercenaria and the salmon Salmo salmar, respire with a smaller ϵresp of 5-10‰. The average respiratory isotope effect of the dominant marine respirers (the bacteria, microalgae and zooplankton) is about 20 ± 3‰. An ϵresp of this magnitude supports the hypothesis that the photosynthesis-respiration cycle is responsible for the 23.5‰ enrichment in the δ18O ratio of atmospheric O2 relative to seawater (the Dole effect). The large value and high variability in the average ϵresp limits the usefulness of a proposed method using the δ18O of naturally fractionated dissolved O2 in seawater as a tracer of primary production in the oligotrophic ocean.

Description: We review the current understanding of the Dole effect (the observed difference between the δ18O of atmospheric O2 and that of seawater) and its causes, extend the record of variations in the Dole effect back to 130 kyr before present using data on the δ18O of O2 obtained from studying the Vostok ice core (Sowers et al., 1993), and discuss the significance of temporal variations. The Dole effect reflects oxygen isotope fractionation during photosynthesis, respiration, and hydrologic processes (evaporation, precipitation, and evapotranspiration). Our best prediction of the present-day Dole effect, +20.8‰, is considerably lower than the observed value, +23.5‰, and we discuss possible causes of this discrepancy. During the past 130 kyr, the Dole effect has been 0.05‰ lower than the present value, on average. The standard deviation of the Dole effect from the mean has been only ±0.2‰, and the Dole effect is nearly unchanged between glacial maxima and interglacial periods. The small variability in the Dole effect suggests that relative rates of primary production in the land and marine realms have been relatively constant. Most periodic variability in the Dole effect is in the precession band, suggesting that changes in this global biogeochemical term reflects variations in low-latitude land hydrology and productivity or possibly variability in low-latitude oceanic productivity.

Description: The isotopic composition of dissolved O2 in seawater, expressed as the δ18O of O2, is unique among the bioactive tracers of the aphotic zone in that it is not linearly related to oxygen utilization via the stoichiometry of organic matter decomposition. In fact, δ18O of O2 depends on the history of water mixing and O2 consumption in the sample studied (Craig and Kroopnick, 1970; Kroopnick and Craig, 1976). For this reason, the variation of δ18O of O2 with O2 concentration depends on regional circulation patterns and oxygen utilization rates. The δ18O of O2 can be used to chartacterize these processes by decoupling their effects. As an example of this assertion, we interpret the covariation between the concentration of O2 and its isotopic composition in the Pacific Ocean as reported by Kroopnick (1987), using four simple representations of seawater mixing and respiration. Kroopnick's data are in general accord with an elementary model of isopycnal mixing represented by diffusive exchange and oxygen utilization in the ocean's interior, coupled with atmospheric equilibrium at the point where the isopycnals outcrop at the sea surface. This specific result illustrates the general point that δ18O of O2 in seawater can serve as an important constraint on more extensive and sophisticated physical models used to estimate rates of oxygen utilization in the deep sea.

Description: 1. The hypothesis that cyanobacteria have higher optimum growth temperatures and higher growth rates at the optimum as compared to chlorophytes was tested by running a controlled experiment with eight cyanobacteria species and eight chlorophyte species at six different temperatures (20–35 °C) and by performing a literature survey. 2. In the experiment, all organisms except the chlorophyte Monoraphidium minutum grew well up to 35 °C. The chlorophyte Chlamydomonas reinhardtii was the fastest-growing organism over the entire temperature range (20–35 °C). 3. Mean optimum growth temperatures were similar for cyanobacteria (29.2 °C) and chlorophytes (29.2 °C). These results are concordant with published data, yielding slightly higher mean optimum growth temperatures for cyanobacteria (27.2 °C) than for chlorophytes (26.3 °C). 4. Mean growth rates of cyanobacteria at 20 °C (0.42 day−1) were significantly lower than those of chlorophytes at 20 °C (0.62 day−1). However, at all other temperatures, there were no differences between mean growth rates of cyanobacteria and chlorophytes. 5. Mean growth rates at the optimum temperature were similar for cyanobacteria (0.92 day−1) and chlorophytes (0.96 day−1). However, analysis of published data revealed that growth rates of cyanobacteria (0.65 day−1) were significantly lower than those of chlorophytes (0.93 day−1) at their optimum temperatures. 6. Although climate warming will probably lead to an intensification of cyanobacterial blooms, our results indicate that this might not be as a result of higher growth rates of cyanobacteria compared with their chlorophyte competitors. The competitive advantage of cyanobacteria can more likely be attributed to their ability to migrate vertically and prevent sedimentation in warmer and more strongly stratified waters and to their resistance to grazing, especially when warming reduces zooplankton body size.

Description: The Swedish UNESCO World Cultural Heritage site of the Birka and Hovgården Iron Age settlements is well suited for the testing of high-resolution archaeological prospection methods. In May 2006 ground-penetrating radar (GPR) and magnetometer test measurements were conducted at Birka, resulting in data of outstanding quality and new archaeological discoveries, but also demonstrating the need for increased spatial sampling regarding GPR prospection at complex Scandinavian sites. Therefore Birka was selected as a testing ground for a pilot study investigating the suitability of the novel multichannel GPR array system MIRA (MALÅ Imaging Radar Array) for efficient, large-scale GPR surveys with very dense spatial sampling. The study was conducted in May 2008 by MALÅ Geoscience AB in collaboration with the archaeological prospection unit of the Swedish National Heritage Board. The very high-resolution three-dimensional GPR pilot survey demonstrated that it is possible to survey 1 ha and more per day with 8 cm cross-line spacing, mapping archaeological structures in unprecedented resolution, such as postholes of only 25 cm diameter. This paper describes the tested technology and methodology as well as the fieldwork and the results of the study.

Description: The survival of cod Gadus morhua, plaice Pleuronectes platessa, and dab Limanda limanda was determined in relation to ambient oxygen saturation at 8° C and 35% m salinity. Mortalit rates were observed in fish exposed to constant oxygen levels for 24h. First mortality occurred around 60 % oxygen saturation in cod and around 30% oxygen saturation in dab and plaice. Below these thresholds mortality increased linearly with decreasing oxygen levels. If cod were infested with 1 or 2 individuals of Lernaeocera branchialis (Copepoda), their tolerance was significantly lower; under such circumstances the incipient lethal oxygen saturation was 66 %.

Description: Much attention has been paid, in recent years, to the potential application of the Ce anomaly, measured in various marine phases, as a paleoceanographic indicator of widespread marine anoxia. In this paper we present and discuss results from recent studies of present‐day rare earth element (REE) distributions (and hence Ce anomaly distributions) in the marine environment which are particularly pertinent to paleoceanography. Subsequently, we review and discuss the validity of the recent literature in which Ce anomalies have been employed as paleoredox indicators.

Description: In many geotechnical systems, it is not uncommon to observe failure in zones of high localized strain called shear bands. The existing models predict the existence and the extent of these localizations, but provide little insight into the micromechanics within the shear bands. This research captures and compares the variation in microstructure both inside and outside of shear bands that formed in physical laboratory plane strain and companion numerical two-dimensional discrete element method (DEM) biaxial compression experiments. Unsheared and sheared laboratory specimens of Ottawa 20–30 sand of varying dilatancy were solidified using a two-stage resin impregnation procedure. The solidified specimens were sectioned and the resulting surfaces were prepared for microstructure observation using optical bright-field microscopy and stereological analysis. Statistical properties of microstructural parameters for sub-regions in a grid pattern and along predefined inclined zones were determined. Similar measurements were performed on 2D DEM simulation specimens at varying strain levels to characterize the evolution of microstructure with increasing strain. The results showed how differences evolved in the mean, standard deviation, and entropy of void distributions with increasing global strain levels. The results indicate how disorder increases and that the material within the shear band does not adhere to the classical concept of critical state, but reaches a terminal void ratio that is largely a function of initial void ratio. Furthermore, there appears to be a transition zone between the far field and the fully formed shear block, as opposed to an abrupt delineation as is traditionally inferred.

Description: The zonal monsoon circulation south of India/Sri Lanka is a crucial link for the exchange between the northeastern and the northwestern Indian Ocean. The first direct measurements from moored stations and shipboard profiling on the seasonal and shorter‐period variability of this flow are presented here. Of the three moorings deployed from January 1991 to February 1992 along 80°30′E between 4°11′N and 5°39′N, the outer two were equipped with upward looking acoustic Doppler current profilers (ADCPs) at 260‐m depth. The moored and shipboard ADCP measurements revealed a very shallow structure of the near‐surface flow, which was mostly confined to the top 100 m and required extrapolation of moored current shears toward the surface for transport calculations. During the winter monsoon, the westward flowing Northeast Monsoon Current (NMC) carried a mean transport of about 12 Sv in early 1991 and 10 Sv in early 1992. During the summer monsoon, transports in the eastward Southwest Monsoon Current (SMC) were about 8 Sv for the region north of 3°45′N, but the current might have extended further south, to 2°N, which would increase the total SMC transport to about 15 Sv. The circulation during the summer was sometimes found to be more complicated, with the SMC occasionally being separated from the Sri Lankan coast by a band of westward flowing low‐salinity water originating in the Bay of Bengal. The annual‐mean flow past Sri Lanka was weakly westward with a transport of only 2–3 Sv. Using seasonal‐mean ship drift currents for surface values in the transport calculations yielded rather similar results to upward extrapolation of the moored profiles. The observations are compared with output of recent numerical models of the Indian Ocean circulation, which generally show the origin of the zonal flow past India/Sri Lanka to be at low latitudes and driven by the large‐scale tropical wind field. Superimposed on this zonal circulation is local communication along the coast between the Bay of Bengal and the Arabian Sea

Description: Based on quantitative X-ray diffraction mineralogical analysis of cores HU2008029-0006/0008 (857-m water depth) located south of the Davis Strait sill, we seek answers to two questions: (i) the temporal correlation of NW Labrador Shelf Sea Heinrich (H-) and Baffin Bay detrital carbonate (BBDC) events, and (ii) the provenance of the sediments? A sediment-unmixing model (SedUnMix) is used to determine provenance variations. Although 12 radiocarbon dates were obtained there were many age reversals and we favour a depth/age model for HU2008029-0008PC based on correlations to well-dated neighbouring cores north and south of Davis Strait. We find no correlation between H- and BBDC events except for H-0, which appears to be a broadly synchronous event along the NE Canadian margin and is correlative with an episode of major moraine building along this flank of the Laurentide Ice Sheet. Unmixing of the sediment composition based on six potential glacial source regions indicates that the bulk of the sediment in 0008PC is derived from glacial erosion of West Greenland, but is punctuated by intervals when dolomite-rich sediments, derived from outcrops north of Baffin Bay, dominate the composition. Estimated dates on these BBDC events are -13, 25 and 30–38 cal ka BP.

Description: Core HU97048-007PC was recovered from the continental Labrador Sea slope at a water depth of 945 m, 250km seaward from the mouth of Cumberland Sound, and 400km north of Hudson Strait. Cumberland Sound is a structural trough partly floored by Cretaceous mudstones and Paleozoic carbonates. The record extends from 10 to 58 ka. On-board logging revealed a complex series of lithofacies, including buff-colored detrital carbonate-rich sediments [Heinrich (H)-events] frequently bracketed by black facies. We investigate the provenance of these facies using quantitative X-ray diffraction on drill-core samples from Paleozoic and Cretaceous bedrock from the SE Baffin Island Shelf, and on the〈2-mm sediment fraction in a transect of five cores from Cumberland Sound to the NW Labrador Sea. A sediment unmixing program was used to discriminate between sediment sources, which included dolomite-rich sediments from Baffin Bay, calcite-rich sediments from Hudson Strait and discrete sources from Cumberland Sound. Results indicated that the bulk of the sediment was derived from Cumberland Sound, but Baffin Bay contributed to sediments coeval with H-0 (Younger Dryas), whereas Hudson Strait was the source during H-events 1–4. Contributions from the Cretaceous outcrops within Cumberland Sound bracket H-events, thus both leading and lagging Hudson Strait-sourced H-events.

Description: On Syros, high‐pressure metamorphism affects a lithological pile that is composed of, from base to top: (1) the Komito‐Vari granitic basement, (2) a margin sedimentary sequence that is predominantly made of marbles and schists (the Pyrgos and Kastri units), and (3) the Kambos metaophiolitic mélange. The tectonic history occurred in three main stages. During the first stage, in the mid‐Eocene, the Kambos oceanic unit was thrust southward on top of the sedimentary pile. Top‐to‐the‐south‐southwest ductile senses of shear are synchronous with prograde high‐pressure metamorphism and associated with this thrusting event. The second stage corresponds to a top‐to‐the‐northeast ductile shear that affects the whole metamorphic pile and is synchronous with the metamorphic retrogression from eclogite to greenschist facies. However, the Kambos oceanic unit remained partly undeformed, as shown by significant volumes containing undeformed lawsonite pseudomorphs. No major extensional detachment related to this exhumation event outcrops on the island. The localized semibrittle to brittle deformation of the third stage is associated with the postmetamorphic development of (1) a ramp‐flat extensional system at the island scale, whose southward minimum displacement is estimated at approximately 7 km, and (2) two sets of steeply dipping strike‐slip faults with a normal component, trending either east–west or around north–south, indicating that the mean stretching and shortening directions are trending NNE–SSW and ESE–WNW, respectively. This sequence of major tectonic events and their relationship to metamorphism are interpreted within the framework of the subduction of the Pindos Ocean and then of the Adria continental passive margin.

Description: Abundances of 12 species of planktonic foraminifera collected in two plankton tows from the east tropical Atlantic are compared to the chlorophyll content and the temperature of the sea water from which they were collected. As expected from previous work in the tropics, all dominant tropical species occur in greatest abundance within the photic zone. Many species occur in greatest abundances in the seasonal thermocline in association with the maximum chlorophyll concentration, while a few algal symbiont-bearing species occur in greatest abundance in the mixed layer. The δ18O measurements of planktonic foraminifera shells from core top sediment samples confirm the vertical stratification within the photic zone that is suggested by the relationship between hydrography and abundances found in the plankton tows and found in the statistical study by Ravelo et al. [1990]. Comparison between the measured δ18O values of planktonic foraminifera with the predicted δ18O profiles of the overlying water column at three core locations indicate that species abundances in the sediment record the seasonally integrated conditions of the photic zone and suggests that the abundance of a species in the sediment depends on whether the preferred ecological conditions of that species may be found within the photic zone of the overlying water column sometime during the year. Species which calcify below the photic zone have only trace relative abundances. Finally, it appears that the total range of δ18O values of the dominant species approximates the predicted annual δ18O of calcite range in the upper 80 m of the water column.

Description: Statistical heterogeneity of abyssal hill properties is often evident in seafloor topography, even under periods of relatively constant spreading direction and rate. In this paper we relate the statistics of topographic slopes computed on finite spatial scales to the autocovariance function and investigate the practicality of using these functions in describing such heterogeneous abyssal hill terrains. For a two-dimensional homogeneous surface, a direct relation exists between the sample autocovariance and the slope distributions at different spatial scales. However, for a heterogeneous field characterized by large transient signals, the computed autocovariance estimate no longer has a clear statistical interpretation and becomes dominated by the transients. In contrast, the family of slope distributions can still be used to derive stable descriptors of the field. Slope statistics are thus useful in deriving a more robust estimate of the autocovariance than the usual sample autocovariance. Moreover, slope statistics may also be used to derive stable estimates of quantities not measurable with the autocovariance function or power spectra, such as the statistical asymmetry of features. Examples of the use of slope statistics and a comparison with autocovariance methods are presented. We document and quantify evidence of statistical asymmetry in a region of abyssal hills in the northeast Pacific and, in a second example, the presence of multiple lineations in a region where a fracture zone cuts through abyssal hill terrain.

Description: Seafloor survey instruments are integral to the study of marine geology. Because understanding their resolution and limitations is critical, we compare how different survey systems represent the seafloor. Coincident data collected at the Galapagos propagator (GLORIA, SeaMARC II, Sea Beam, Deep-Tow, camera sled, and Alvin) allow comparisons of how well seafloor features (e.g., faults and volcanoes) observed and characterized in high resolution data are represented in lower resolution, coarser-scale data sets. Our reported values for the minimum sizes of detected and well-represented features show that practical geological resolutions are generally ∼2-10 times lower than theoretical resolutions; care must be taken in evaluating which system to use to address a particular problem.

Description: In virtually every assessment of responses to large-scale crises and disasters, coordination is identified as a critical failure factor. After the crisis, official committees and political opponents often characterize the early phases of the response as a ‘failure to coordinate.’ Not surprisingly, improved coordination quickly emerges as the prescribed solution. Coordination, then, is apparently both the problem and the solution. But the proposed solutions rarely solve the problem: coordination continues to mar most crises and disasters. In the absence of a shared body of knowledge on coordination, it is hard to formulate a normative framework that allows for systematic assessment of coordination in times of crisis. As coordination is widely perceived as an important function of crisis and disaster management, this absence undermines a fair and balanced assessment of crisis management performance. This paper seeks to address that void. We aim to develop a framework that explains both the failure and success of crisis coordination. We do this by exploring the relevant literature, reformulating what coordination is and distilling from research the factors that cause failure and success.

Description: The purine alkaloid caffeine is a major component of many beverages such as coffee and tea. Caffeine and its metabolites theobromine and xanthine have been shown to have antioxidant properties. Caffeine can also act as adenosine-receptor antagonist. Although it has been shown that adenosine and antioxidants promote wound healing, the effect of caffeine on wound healing is currently unknown. To investigate the effects of caffeine on processes involved in epithelialisation, we used primary human keratinocytes, HaCaT cell line and ex vivo model of human skin. First, we tested the effects of caffeine on cell proliferation, differentiation, adhesion and migration, processes essential for normal wound epithelialisation and closure. We used 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide (MTT) proliferation assay to test the effects of seven different caffeine doses ranging from 0·1 to 5 mM. We found that caffeine restricted cell proliferation of keratinocytes in a dose-dependent manner. Furthermore, scratch wound assays performed on keratinocyte monolayers indicated dose-dependent delays in cell migration. Interestingly, adhesion and differentiation remained unaffected in monolayer cultures treated with various doses of caffeine. Using a human ex vivo wound healing model, we tested topical application of caffeine and found that it impedes epithelialisation, confirming in vitro data. We conclude that caffeine, which is known to have antioxidant properties, impedes keratinocyte proliferation and migration, suggesting that it may have an inhibitory effect on wound healing and epithelialisation. Therefore, our findings are more in support of a role for caffeine as adenosine-receptor antagonist that would negate the effect of adenosine in promoting wound healing.

Description: The responses of sea ice microalgae to variation in ambient irradiance (0 to 150 μE · m−2· s−1), temperature (–6° to + 6° C), and salinity (0 to 100 ppt) were tested to determine whether these variables act independently or in concert to influence rates of microalgal photosynthesis. The photosynthetic efficiency and maximum photosynthetic rate for sea ice microalgae increased as a function of incubation temperature between -6° and + 6° C. Furthermore, photosynthetic efficiency, maximum photosynthetic rate, and quantum yield were greatest at salinities between SO and 50 ppt. In contrast, the mean specific absorption coefficients were lowest near seawater salinities, and the saturating irradiance, Is, appeared to be inversely proportional to salinity. Results also suggest that the effects of salinity on the growth of sea ice microalgae are independent of those elicited by temperature or light, and that the functional relationship between salinity and light or temperature is multiplicative. This information is essential to the proper formulation of algorithms used to describe algal growth in environments where light, temperature, and salinity are changing simultaneously, such as within sea ice or within the water column at the marginal ice edge zone.

Description: Pore water has been analyzed from sediment cores taken from three areas on the eastern flank of the Juan de Fuca Ridge as part of FlankFlux 90, a study of hydrothermal circulation through mid-ocean ridge flanks. Seismic reflection and heat flow surveys (Davis et al., 1992a) indicate that the three areas differ in sediment thickness, basement topography, abundance of outcrops, basement temperature, and fraction of heat lost by advection versus conduction. Area 1 is on 0.6 Ma crust with nearly continuous basement outcrop, area 2 is on 1.3 Ma crust over the first buried ridge parallel to the present ridge axis, and area 3 is on 3.5–3.8 Ma crust over two axis-parallel buried ridges that penetrate the sediment cover in three locations. Each area includes a hydrothermal system in which seawater flows into basement, reacts with crustal basalt, and then exits basement either through the sediment or directly into the overlying water column. As constrained by concentrations of sulfate and lithium in the pore waters, at least some seawater enters basement in all three areas without reacting fully with the overlying sediment, even where no outcrops are known nearby. Speeds of up welling of pore water through the sediment have been estimated by fitting profiles of dissolved magnesium and chlorinity, which behave conservatively in these areas, to numerical time-dependent transport models. The estimated velocities range from 〈0.1 to 7.4 cm/yr; faster flows probably occur but were not sampled. Upwelling speed correlates positively with heat flow and basement highs and negatively with sediment thickness. The correlation with heat flow differs from area 2 to area 3 along with differences in physical properties of the turbidite sediment. We have documented pore water upwelling through sediment up to 100 m thick. We estimate that upwelling continues at decreasing speeds through sediment up to 160 m thick, corresponding to a heat flow of 0.44 W/m2 in area 2 and 0.3 W/m2 in area 3. Concentrations of magnesium and chlorinity in the altered seawater upwelling from basement are uniform within each area but differ from one area to the next. Both species remain at the bottom seawater concentration in area 1, where basement is cooled to 〈10°C at the base of the sediments mainly by advection. The concentration of magnesium decreases with increasing basement temperature in areas 2 and 3 to a minimum of 2.5 mmol/kg at about 90°C in area 3. The transition from largely advective to largely conductive heat loss occurs over only 20 km between areas 1 and 2 and corresponds to a dramatic change in the composition of fluid circulating through basement, as the uppermost basement is heated from 〈10° to 40–50°C. Chlorinity of the basement fluid increases above the present-day bottom seawater concentration in areas 2 and 3 and in nearly all other mid-ocean ridge flanks studied to date, as a result of rock hydration and the higher chlorinity of bottom seawater during the last glacial period. While chlorinity generally correlates positively with uppermost basement temperature in various ridge flank hydrothermal systems, it reaches a maximum in area 2 at only 40°C, probably because alteration there occurs at a lower water/rock ratio than elsewhere. For all mid-ocean ridge flanks studied to date, the temperature at the basement interface correlates better with the fraction of heat lost by advection versus conduction and with the average thickness of the sediment cover than with crustal age.

Description: Some basic characteristics of ridge axis topography are related to spreading rate and distance from neighboring transform faults. For example, the presence of an axial depression coincides in most cases with slow spreading rates, and the overall depth of the ridge axis increases toward ridge-transform intersections (RTIs). On the other hand, it is also well known that the relief and width of the axial valley on, say, the Mid-Atlantic Ridge (MAR) vary along strike in an unpredictable manner. The purpose of the present study is to quantify how much of the observed variation in the first-order topography at the axis is related to changes in other parameters, such as spreading rate and distance from RTIs. To carry out this test, the zero-age depth and the relief and width of the axial valley have been estimated on 46 profiles that cross the axis of the MAR between the equator and 50°N (full spreading rates 22–36 km/Ma). Zero-age depth is here defined to be the depth at age zero of the best fit thermal subsidence trend. Axial valley relief and width have been measured with respect to the ridge flanks by the least squares fit of a Gaussian bell. The measured axial valley relief varies between 600 and 2100 m (average ∼1300 m), while the valley width varies between 16 and 62 km (average ∼35 km). The correlation between zero-age depth, axial valley relief and width, latitude of axial crossing, spreading rate, distance from nearest RTT, and offset on the nearby transforms has been investigated using linear regression techniques. The main results of the present study are that (1) zero-age depth significantly correlates with latitude of crossing, distance from nearest RTI, and offset on the nearby transforms; and (2) the variation in axial valley relief and width is essentially uncorrelated with spreading rate, zero-age depth, distance from nearest RTT, and offset on nearby transforms. The preferred explanation for the observed spatial variation in axial valley geometry is that it reflects a temporal variation. In fact, if the rough abyssal hill topography typical of the MAR flanks is created within the axial valley, the shape of the axial valley cannot be steady state (although the existence of an axial valley may be a steady state phenomenon). This hypothesis is supported by the observation that the variability in axial valley relief is similar to the overall amplitude of abyssal hill topography, measured as the residual on the thermal subsidence trend.

Description: Geoengineering, especially its potentially fast and high-leverage versions, is often justified as a necessary response to possible future climate emergencies. In this article, we take the notion of ‘necessity’ in international law as a starting point in assessing how rapid, high-leverage geoengineering might be justified legally. The need to specify reliably ‘grave and imminent peril’ makes such a justification difficult because our scientific ability to predict abrupt climate change, for example, as tipping elements, is limited. The time it takes to establish scientific consensus as well as policy acceptance restricts the scope for effective forewarning and so pre-emptive justifications for geoengineering become more tempting. While recognizing that dangerous, large-scale impacts of climate change is becoming increasingly difficult to avoid, the pre-emptive, emergency frame is problematic. We suggest that arguments from emergency operate on a high level of uncertainty and tend toward hubristic attempts to shape the future, as well as tending to close down rather than open up space for deliberation. We conclude that the emergency frame is not likely to go away, that ignoring or repressing it is a dangerous response, and that more effort is required to defuse and disarm emergency rhetoric.

Description: In May 2006 high-resolution measurements using ground-penetrating radar (GPR) and magnetic gradiometer systems conducted over selected areas at the site of the Viking Age settlement and trading place Birka in central Sweden demonstrated the suitability of these methods for archaeological prospection of Scandinavian proto-urban settlements. The non-invasive geophysical surveys revealed numerous structural details of the settlement: houses, property boundaries, track-ways, buried remains of the town ramparts dating from different building periods, including a gate, were mapped with a manually operated single-channel GPR system and a four-channel magnetometer array. The combination of these two prospection methods, state-of-the-art data processing and visualization and archaeological interpretation within a geographical information system resulted in valuable new information about the UNESCOWorld Cultural Heritage Site Birka-Hovgården.We present methodology and results of this first archaeological prospection case study conducted in 2006.

Description: An examination of 311 intraplate earthquakes in the Australian plate portion of the Pacific Ocean basin reported from 1918 to 1990 reveals that only 113 events are reliably intraplate, with most of the rest relocating to active trenches and transforms. The non-random distribution of the reliably intraplate events gives insight into the tectonic stresses present. The central Tasman Sea is mostly aseismic except for a swarm of activity at the predicted site of the Tasmantid hot spot. To the north, the broad regions of the Coral Sea, South Fiji Basin and Lord Howe Rise show very little intraplate seismicity, yet the narrow Norfolk Ridge and Three Kings Rise, caught between the double convergence of the New Hebrides and Tonga subduction zones, support many more earthquakes. High levels of intraplate seismicity in the southern Tasman Sea adjacent to the Macquarie Ridge Complex (MRC) indicate that this region may be undergoing internal deformation due to the unusual nature of the Australia-Pacific plate boundary. Additional support exists in the form of intraplate focal mechanisms similar to those at the plate boundary and a set of parallel gravity rolls which are observed in recent geoid maps. Some aftershocks of the Mw = 8.2 Macquarie Ridge earthquake of 1989 occurred in a fracture zone west of the Macquarie Ridge Complex [Das, 1992], but we have found several earthquakes from as early as 1924 which relocate to this feature, suggesting that its reactivation may be more significant than previously thought. This reactivation of a fossil fracture zone may be the result of the increasing amount of oblique convergence between the Australia and Pacific plates at the Macquarie Ridge Complex, formerly a spreading center, and the stresses associated with subducting recently formed Australian ocean crust beneath the older Pacific plate.

Description: Mesoscale fluctuations in the western tropical Atlantic are analyzed in Geosat altimetry sea surface height (SSH) and geostrophic velocity anomalies to investigate the role of eddies in the North Brazil Current (NBC) retroflection zone. The detachment of anticyclonic eddies from the NBC retroflection is observed during November through January, when the NBC retroflection into the North Equatorial Countercurrent (NECC) weakens and finally breaks down. These eddies are traced over more than 2 months between 50° and 60°W on their way toward the Caribbean, at average speeds of 15 cm s−1. In one case an apparent merger of two anticyclonic eddies occurs, one detached from the retroflection zone and one detached from the NECC. Cyclonic eddies are also observed but are generally less persistent. Mesoscale SSH variance just west of the retroflection increases by a factor of 2 from early summer to winter, mainly because of the anticyclonic eddies. Interhemispheric water mass transfer associated with the eddy flux out of the NBC retroflection may amount to an average transport of 3 Sv.

Description: Early diagenesis of the coupled dissolved silica-opal system in bioturbated sediments may be explained by one of three possible models of increasing mathematical complexity, i.e. the simple, but unused constant-opal model (abbreviated C.O.), the Schink et al. (1975) model (abbreviated SG&F) for which Wong and Grosch (1978) have supplied an analytical solution (designated as W&G), and the improved but much more sophisticated model proposed by Schink and Guinasso (1980) that must be solved numerically (S&G). Scaling analysis and computational comparisons show that the C.O. model and the SG&F model, as calculated via the W&G solution, are asymptotically valid forms of more complete S&G model for the limits of “large” and “small” opal concentrations, respectively. Specifically, the C.O. model is found to provide an excellent approximation to the vastly more complicated S&G model if the amount of opal preserved at depth in the sediment, b(∞), satisfies the inequality, b(∞) ≥ {[0.1(1 - φ)DB][φγDS(CS - CW)]−1 + ρb−1}−1, where φ is the porosity, DB is the mixing coefficient, DS is the tortuosity-corrected molecular diffusivity of silica, CS is the solubility of opal, CW is the silica concentration in the overlying waters, ρb is the intrinsic density of opal and γ is a unit conversion constant if b and C are in different units. Schink and Guinasso (1980) have criticized Wong and Grosch (1978) for utilizing their solution of the earlier SG&F model to describe opal accumulation, a situation for which they believed the SG&F model was invalid. This study has found, however, that for conditions characteristic of the deep sea, the SG&F model and so the W&G solution remain reasonably accurate even if small amounts of opal escape dissolution and collect, but that radical divergence from the S&G model can be expected if the flux of silica is sufficient to create a siliceous ooze. This reflects the minor role played by the divergence of the advective flux in the balance of terms in the diagenetic conservation equations when little opal is preserved. These findings should resolve any uncertainty and controversy over the use of the W&G solution. Opal diagenesis in bioturbated shelf-like sediments appears to be adequately described by the C.O. model alone. The C.O. model, coupled where necessary to the W&G solution, constitutes an attractive alternative to the S&G model because relatively simple analytical methods of solution may be employed rather than advanced numerical techniques.

Description: The eastern Mediterranean transient (EMT) was caused by a combination of high‐salinity waters intruding into the Aegean Sea and the two particularly strong winters of 1991–1992 and 1992–1993. The approach in this chapter is to search for specific signatures in the historic hydrographic observations, which date back to 1910. To deal with the problem that up into the 1950s the data not only are of limited precision but also have gaps of about 20 years, it is advantageous to consider the fact that the evolution of the actual EMT is rather well documented over a similar time span. The chapter begins by outlining the characteristics of the current EMT. Thereafter, a selection of suitable hydrographic observations among the available historic data is provided to compare these with signatures expected from the evolution of the actual EMT.

Description: Sea level variations and geostrophic circulation in the western tropical Atlantic are studied in an intercomparison of Geosat altimetry and the World Ocean Circulation Experiment community model effort high‐resolution model forced with climatological windstress. Overall, the annual cycles of geostrophic current fields of both products compare very well. Special comparison areas are the western North Equatorial Countercurrent (NECC) and the North Brazil Current (NBC) region. Meridional profiles of zonal velocity anomalies show a seasonal meridional migration of the NECC core centered at 5°N and a weaker eastward maximum during fall at 9°N in both products. The Geosat and model seasonal cycles of the NECC core velocity in the region 35°–45°W are highly correlated and agree with respect to the onset of eastward current acceleration and deceleration in May and December, respectively. Geosat time series from November 1986 to June 1989 show year to year differences, in particular an anomalous early NECC acceleration phase in 1987. In the NBC region 54°–58°W, flow anomalies from both Geosat and the model have two westward maxima, in March and June, which appear to be associated with eastward anomalies further offshore.

Description: Current measures of microbe‐mediated biogeochemical processes in sediments were examined for their potential use as indicators of heavy metal ecotoxicity in both river sediments and bacterial cultures. Assays were carried out with HgCl2, CuSO4, and 3CdSO4 · 8H2O added to sediment samples and bacterial cell suspensions at concentrations ranging from 0.1 to 10 mM and 0.1 μM to 1 mM, respectively. Chemoautotrophic CO2 fixation by Elbe River sediment microbiota was most sensitive to Hg2+ and Cd2+, but not to Cu2+. Among the estimates of heterotrophic productivity, incorporation of leucine into cellular protein showed clearer dose responses than incorporation of thymidine into bacterial DNA. Thymidine incorporation was highly resistant to and even stimulated by metal ions, particularly in starved and anaerobic cultures of a test strain of Vibrio anguillarum. Similar metal ion induced “overshoot” responses beyond the levels of untreated controls were noted for mineralization of 14C‐glucose by V. anguillarum and, in the case of Cd2+, also in sediment. As a less complex measure of microbial respiratory activity, succinate dehydrogenase (SDH) showed normal dose responses without stimulatory effects, as long as bacterial cell homogenates were assayed. Despite this result, it is concluded that levels of SDH in natural sediment microbiota are inevitably affected by metal‐induced processes of selection and enzyme synthesis, and would thus fail to provide an appropriate measure of metal ecotoxicity. The final conclusion is that current parameters of microbial production and activity often reveal dose responses that do not fulfill basic requirements of ecotoxicity testing in metal‐polluted sediments.

Description: This article presents a fundamental study on the role of particle breakage on the shear behavior of granular soils using the three-dimensional (3-D) discrete element method. The effects of particle breakage on the stress ratio, volumetric strain, plastic deformation, and shear failure behavior of dense crushable specimens undergoing plane strain shearing conditions are thoroughly investigated through a variety of micromechanical analyses and mechanism demonstrations. The simulation of a granular specimen is based on the effective modeling of realistic fracture behavior of single soil particles, which is demonstrated by the qualitative agreement between the results from platen compression simulations and those from physical laboratory tests. The simulation results show that the major effects of particle breakage include the reduction of volumetric dilation and peak stress ratio and more importantly the plastic deformation mechanisms and the shear failure modes vary as a function of soil crushability. Consistent macro- and micromechanical evidence demonstrates that shear banding and massive volumetric contraction depict the two end failure modes of a dense specimen, which is dominated by particle rearrangement–induced dilation and particle crushing–induced compression, respectively, with a more general case being the combination and competition of the two failure modes in the medium range of soil crushability and confining stress. However, it is further shown that a highly crushable specimen will eventually develop a shear band at a large strain because of the continuous decay of particle breakage.

Description: Studies on the Mediterranean Undercurrent in the Gulf of Cádiz showed that bacterial abundance and biomass as well as heterotrophic activity were higher in the water of Mediterranean origin in 500–800 m depth than in the adjacent Atlantic water. Upwelling processes off Mauretania and Portugal were accompanied by high bacterial numbers (bacterial plate counts) in the mixed surface layer. Changes in the qualitative composition of the bacterial flora in the waters off West Africa and in the Arabian Gulf were explained by the introduction of dust from desert regions into the sea by aeolian transport. In the Western Baltic migration of fish was detected by the presence of special bacteria, which normally live on or in these animals. Regions with complex hydrographic structures such as the Western and Central Baltic Sea revealed interesting relationships between bacteriological abundance and activity on the one hand and characteristic physical and chemical properties, such as origin, salinity and O2/H2S‐content, on the other. The importance of bacteriological variables for the characterization of different water bodies is discussed.

Description: The effect of midlatitude and tropical internal wave variability on current profile measurements is investigated and quantified to yield practical error estimates. First, a data set of Pegasus current profiles from the tropical Atlantic (6°S to 6°N) is analyzed for their rms down/up differences, which are compared with predictions from Garrett‐Munk type internal wave theory and with statistics derived from current meter moorings in the same region. The agreement in terms of amplitudes and vertical distribution proves that most of those differences are due to internal waves and not instrumental errors. Nonetheless, this is the noise of the measurements, if low‐frequency motions are sought, and the errors can thus be quantified using the same internal wave theories. At midlatitudes the error variance is the usual 44(N/3 cph) cm2/s2 with some latitude dependence, and the effect of averaging in the vertical or summing several profiles (e.g., up and down) is estimated. The same is done for equatorial situations, where construction of a crude equatorial frequency spectrum for internal waves yields 77(N/3 cph)cm2/s2 for the error variance. Again, error reduction due to averaging is estimated.

Description: Zonal wind anomalies in the western equatorial Atlantic during late boreal winter to early summer precondition boreal summer cold/warm events in the eastern equatorial Atlantic (EEA) that manifest in a strong interannual Atlantic cold tongue (ACT) variability. Local intraseasonal wind fluctuations, linked to the St. Helena anticyclone, contribute to the variability of cold tongue onset and strength, particularly during years with preconditioned shallow thermoclines. The impact of cold tongue sea surface temperature (SST) anomalies on the wind field in the Gulf of Guinea is assessed. It contributes to the northward migration of humidity and convection and possibly the West African monsoon (WAM) jump. Copyright @ 2010 Royal Meteorological Society

Description: The Mauritanian coastal area is one of the most biologically productive upwelling regions in the world ocean. Shipboard observations carried out during maximum upwelling season and short-term moored observations are used to investigate diapycnal mixing processes and to quantify diapycnal fluxes of nutrients. The observations indicate strong tide-topography interactions that are favored by near-critical angles occurring on large parts of the continental slope. Moored velocity observations reveal the existence of highly nonlinear internal waves and bores and levels of internal wave spectra are strongly elevated near the buoyancy frequency. Dissipation rates of turbulent kinetic energy at the slope and shelf determined from microstructure measurements in the upper 200 m averages to ɛ = 5 × 10−8 W kg−1. Particularly elevated dissipation rates were found at the continental slope close to the shelf break, being enhanced by a factor of 100 to 1000 compared to dissipation rates farther offshore. Vertically integrated dissipation rates per unit volume are strongest at the upper continental slope reaching values of up to 30 mW m−2. A comparison of fine-scale parameterizations of turbulent dissipation rates for shelf regions and the open ocean to the measured dissipation rates indicates deficiencies in reproducing the observations. Diapycnal nitrate fluxes above the continental slope at the base of the mixed layer yielding a mean value of 12 × 10−2 μmol m−2 s−1 are amongst the largest published to date. However, they seem to only represent a minor contribution (10% to 25%) to the net community production in the upwelling region.

Description: Water transported by slabs into the mantle at subduction zones plays key roles in tectonics, magmatism, fluid and volatiles fluxes, and most likely in the chemical evolution of the Earth's oceans and mantle. Yet, incorporation of water into oceanic plates before subduction is a poorly understood process. Several studies suggest that plates may acquire most water at subduction trenches because the ocean crust and uppermost mantle there are intensely faulted caused by bending and/or slab pull, and display anomalously low seismic velocities. The low velocities are interpreted to arise from a combination of fluid-filled fractures associated to normal faulting and mineral transformation by hydration. Mantle hydration by transformation of nominally dry peridotite to water-rich serpentinite could potentially create the largest fluid reservoir in slabs and is therefore the most relevant for the transport of water in the deep mantle. The depth of fracturing by normal-fault earthquakes is usually not well constrained, but could potentially create deep percolation paths for water that might hydrate up to tens of kilometers into the mantle, restrained only by serpentine stability. Yet, interpretation of deep intraplate mineral alteration remains speculative because active-source seismic experiments have sampled only the uppermost few kilometers of mantle, leaving the depth-extent of anomalous velocities and their relation to faulting unconstrained. Here we use a joint inversion of active-source seismic data, and both local and regional earthquakes to map the three dimensional distribution of anomalous velocities under a seismic network deployed at the trench seafloor. We found that anomalous velocities are restrained to the depth of normal-fault micro-earthquake activity recorded in the network, and are considerably shallower than either the rupture depth of teleseismic, normal-fault earthquakes, or the limit of serpentine stability. Extensional micro-earthquakes indicate that each fault in the region slips every 2–3 months which may facilitate regular water percolation. Deeper, teleseismic earthquakes are comparatively infrequent, and possibly do not cause significant fracturing that remains open long enough to promote alteration detectable with our seismic study. Our results show that the stability field of serpentine does not constrain the depth of potential mantle hydration.

Description: Understanding the pre-anthropogenic Pb cycle of central North Pacific deep water has attracted a lot of attention in recent years, partly because of its unique geographical location in that it is a remote gyre system characterized by high dust fluxes and sluggish overturning circulation. However, the factors controlling Pb isotope evolution in this area over the Cenozoic are still controversial and various mechanisms have been proposed in previous studies. Here we report new Pb and Nd isotope time series of four ferromanganese crusts (two from the western Pacific near the Mariana arc and the other two from the central Pacific). Together with previously published records, we discuss for the first time the significance of a persistent and systematic Pb isotopic provinciality recorded by central North Pacific crusts over the Cenozoic. We propose that globally well mixed stratosphere volcanic aerosols could contribute Pb but have not been the major factors controlling the Pb isotope distribution in the central North Pacific over time. Island arc input (and probably enhanced hydrothermal input between about 45 and 20 Ma) likely controlled the Pb isotope provinciality and evolution prior to ~20 Ma, when coeval Pb isotope records in different crusts showed large differences and atmospheric silicate dust flux was extremely low. After the Eocene, in particular after 20 Ma, Asian dust input has become an isotopically resolvable source, while island arc-derived Pb has remained important to balance the dust input and to produce the observed Pb isotope distribution in the central North Pacific during this period.

Description: A realistic primitive-equation model of the Southern Ocean at eddying spatial resolution is used to examine the effect of ocean-surface-velocity dependence of the wind stress on the strength of near-inertial oscillations. Accounting for the ocean-surface-velocity dependence of the wind stress leads to a large reduction of wind-induced near-inertial energy of approximately 40 percent and of wind power input into the near-inertial frequency band of approximately 20 percent. A large part of this reduction can be explained by the leading-order modification to the wind stress if the ocean-surface velocity is included. The strength of the reduction is shown to be modulated by the inverse of the ocean-surface-mixed-layer depth. We conclude that the effect of surface-velocity dependence of the wind stress should be taken into account when estimating the wind-power input into the near-inertial frequency band and when estimating near-inertial energy levels in the ocean due to wind forcing.

Description: The history of climate modeling begins with conceptual models, followed in the 19th century by mathematical models of energy balance and radiative transfer, as well as simple analog models. Since the 1950s, the principal tools of climate science have been computer simulation models of the global general circulation. From the 1990s to the present, a trend toward increasingly comprehensive coupled models of the entire climate system has dominated the field. Climate model evaluation and intercomparison is changing modeling into a more standardized, modular process, presenting the potential for unifying research and operational aspects of climate science

Description: This study presents a new estimate of the oceanic anthropogenic CO2(Cant) sink over the industrial era (1780 to present), from assimilation of potential temperature, salinity, radiocarbon, and CFC-11 observations in a global steady state ocean circulation inverse model (OCIM). This study differs from previous data-based estimates of the oceanic Cant sink in that dynamical constraints on ocean circulation are accounted for, and the ocean circulation is explicitly modeled, allowing the calculation of oceanic Cant storage, air-sea fluxes, and transports in a consistent manner. The resulting uncertainty of the OCIM-estimated Cant uptake, transport, and storage is significantly smaller than the comparable uncertainty from purely data-based or model-based estimates. The OCIM-estimated oceanic Cant storage is 160–166 PgC in 2012, and the oceanic Cant uptake rate averaged over the period 2000–2010 is 2.6 PgC yr−1 or about 30% of current anthropogenic CO2 emissions. This result implies a residual (primarily terrestrial) Cant sink of about 1.6 PgC yr−1 for the same period. The Southern Ocean is the primary conduit for Cant entering the ocean, taking up about 1.1 PgC yr−1 in 2012, which represents about 40% of the contemporary oceanic Cant uptake. It is suggested that the most significant source of remaining uncertainty in the oceanic Cant sink is due to potential variability in the ocean circulation over the industrial era.

Description: Contemporary genetic diversity is the product of both historical and contemporary forces, such as climatic and geological processes affecting range distribution and continuously moulded by evolutionary forces selection, gene flow and genetic drift. Predatory freshwater fishes, such as Northern Pike Esox lucius, commonly exhibit small population sizes, and several local populations are considered endangered. Pike inhabit diverse habitat types, including lakes, rivers and brackish marine waters, thus spanning from small isolated patches to large open marine systems. However, pike population structure from local to regional scales is relatively poorly described, in spite of its significance to developing conservation measures. We analysed microsatellite variation in a total of 1185 North European pike from 46 samples collected across both local and regional scales, as well as over time, to address two overarching questions: Is pike population structure associated with local and/or regional connectivity patterns, and which factors likely have the main influence on the contemporary distribution of genetic diversity? To answer this, we combined estimators of population diversity and structure to assess evidence of whether populations within (i) habitats, (ii) drainage systems and (iii) geographical regions are closer related than among these ranges, and whether patterns are temporally stable. Contrasting previous predictions that genetic drift obscures signals of postglacial colonisation history, we identified clear regional differences in population genetic signatures, suggesting a major effect of drainage divides on colonisation history and connectivity. However, several populations deviated from the general pattern, showing that local processes may be complex and need to be examined case-by-case.

Description: Sedimentation rates (corrected for compaction) from along the passive continental margin of Africa between the Equatorial Fracture Zone and Somalia are used to compare the rates of subsidence of the continental crust since early Mesozoic time. Three distinctive subsidence histories can be identified which correspond with basinal areas that have different structural styles: rifted (west coast), sheared (Equatorial and Agulhas fracture zones) and sunk (zones of vertical tectonics in eastern Africa). A comparison of subsidence rates with other tensional margins (NE USA and the North Sea) and a consideration of the plate tectonic history of the African margins leads to the proposal of a geo and thermodynamic model that takes cognizance of the worldwide mid-Cretaceous rheological discontinuity between taphrogenic and epeirogenic basin formation recognized by Kent, and the more generally accepted, purely plate tectonic driven model of margin subsidence. The new suggestion involves a lower Mesozoic worldwide rise in the geothermal gradient in the lithosphere which produces metamorphism of the base of the continental crust and initiates taphrogenesis along lineaments throughout Gondwanaland. A lowering of the geothermal gradient in the lower Cretaceous produces a switch to epeirogenic subsidence, driven solely by sediment loading and thermal contraction, by Aptian/Albian times. The thermal event facilitated continental separation, and sea floor spreading commenced locally at various times along the active taphrogenic belts. Local thermal and tectonic aberrations associated with this phenomenon over print onto the worldwide pattern of marginal basin subsidence. A further rise in the geothermal gradient may have been responsible for renewed taphrogenesis in eastern Africa in Tertiary times.

Description: Gas hydrate-related bottom-simulating reflectors mark the phase boundary between hydrate and free gas in the subsurface, and therefore may be used to estimate geothermal gradients and hence heat flow. The depth and temperature of the phase boundary depend on the composition of the hydrateforming gas and of the pore fluid. In the absence of direct sampling, these compositions remain unknown. We develop an alternative approach that is less sensitive to compositional uncertainties and can be applied when the bottom-simulating reflector is densely sampled in a region with significant seabed relief. We apply this approach to a three-dimensional seismic dataset from the eastern Black Sea.

Description: Stratospheric ozone depletion and emission of greenhouse gases lead to a trend of the southern annular mode (SAM) toward its high-index polarity. The positive phase of the SAM is characterized by stronger than usual westerly winds that induce changes in the physical carbon transport. Changes in the natural carbon budget of the upper 100 m of the Southern Ocean in response to a positive SAM phase are explored with a coupled ecosystem-general circulation model and regression analysis. Previously overlooked processes that are important for the upper ocean carbon budget during a positive SAM period are identified, namely, export production and downward transport of carbon north of the polar front (PF) as large as the upwelling in the south. The limiting micronutrient iron is brought into the surface layer by upwelling and stimulates phytoplankton growth and export production but only in summer. This leads to a drawdown of carbon and less summertime outgassing (or more uptake) of natural CO2. In winter, biological mechanisms are inactive, and the surface ocean equilibrates with the atmosphere by releasing CO2. In the annual mean, the upper ocean region south of the PF loses more carbon by additional export production than by the release of CO2 into the atmosphere, highlighting the role of the biological carbon pump in response to a positive SAM event.

Description: We combined data sets of measured sedimentary calcium carbonate (CaCO3) and satellite-derived pelagic primary production to parameterize the relation between CaCO3 content on the Antarctic shelves and primary production in the overlying water column. CaCO3 content predicted in this way was in good agreement with the measured data. The parameterization was then used to chart CaCO3 content on the Antarctic shelves all around the Antarctic, using the satellite-derived primary production. The total inventory of CaCO3 in the bioturbated layer of Antarctic shelf sediments was estimated to be 0.5 Pg C. This quantity is comparable to the total CO2 uptake by the Southern Ocean in only one to a few years (dependent on the uptake estimate and area considered), indicating that the dissolution of these carbonates will neither delay ocean acidification in this area nor augment the Southern Ocean CO2 uptake capacity.