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  • Nature Research  (112)
  • INGV  (56)
  • Molecular Diversity Preservation International
  • Oxford University Press
  • 2020-2023  (209)
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  • 1
    Publication Date: 2022-01-06
    Description: Deep sea mining for poly-metallic nodules impacts the environment in many ways. A key potential hazard is the creation of a sediment plume from resuspending sediment during seabed mining. The resuspended matter disperses with currents but eventually resettles on the seabed. Resettling causes a blanketing of the seafloor environment, potentially causing harm to in-, epi- and hyperbenthic communities with possible cascading effects into food webs of deep sea habitats. Mapping the extent of such blanketing is thus an important factor in quantifying potential impacts of deep-sea mining.One technology that can assess seabed blanketing is optical imaging with cameras at square-kilometre scale. To efficiently analyse the resulting Terabytes of image data with minimized bias, automated image analysis is required. Moreover, effective quantitative monitoring of the blanketing requires ground truthing of the image data. Here, we present results from a camera-based monitoring of a deep-sea mining simulation combined with automated image analysis using the CoMoNoD method and low-cost seabed sediment traps for quantification of the blanketing thickness. We found that the impacted area was about 50 percent larger than previously determined by manual image annotation.
    Type: Article , PeerReviewed , info:eu-repo/semantics/article
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  • 2
    Publication Date: 2022-01-07
    Description: Intense bottom-ice algal blooms, often dominated by diatoms, are an important source of food for grazers, organic matter for export during sea ice melt, and dissolved organic carbon. Sea-ice diatoms have a number of adaptations, including accumulation of compatible solutes, that allows them to inhabit this highly variable environment characterized by extremes in temperature, salinity, and light. In addition to protecting them from extreme conditions, these compounds present a labile, nutrient-rich source of organic matter, and include precursors to climate active compounds (e.g., dimethyl sulfide [DMS]), which are likely regulated with environmental change. Here, intracellular concentrations of 45 metabolites were quantified in three sea-ice diatom species and were compared to two temperate diatom species, with a focus on compatible solutes and free amino acid pools. There was a large diversity of metabolite concentrations between diatoms with no clear pattern identifiable for sea-ice species. Concentrations of some compatible solutes (isethionic acid, homarine) approached 1 M in the sea-ice diatoms, Fragilariopsis cylindrus and Navicula cf. perminuta, but not in the larger sea-ice diatom, Nitzschia lecointei or in the temperate diatom species. The differential use of compatible solutes in sea-ice diatoms suggests different adaptive strategies and highlights which small organic compounds may be important in polar biogeochemical cycles.
    Type: Article , PeerReviewed
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  • 3
    Publication Date: 2022-09-16
    Description: Marine protists abound, but are challenging to study, and their interactions with other microbes in nature remain largely unknown. We captured wild predatory protists (choanoflagellates) and discovered a divergent, obligately co-associated bacterial group that lives by extracting resources from these predators.
    Type: Article , NonPeerReviewed
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  • 4
    Publication Date: 2022-11-14
    Description: The Indo-Pacific Warm Pool (IPWP) exerts a dominant role in global climate by releasing huge amounts of water vapour and latent heat to the atmosphere and modulating upper ocean heat content (OHC), which has been implicated in modern climate change1. The long-term variations of IPWP OHC and their effect on monsoonal hydroclimate are, however, not fully explored. Here, by combining geochemical proxies and transient climate simulations, we show that changes of IPWP upper (0–200 m) OHC over the past 360,000 years exhibit dominant precession and weaker obliquity cycles and follow changes in meridional insolation gradients, and that only 30%–40% of the deglacial increases are related to changes in ice volume. On the precessional band, higher upper OHC correlates with oxygen isotope enrichments in IPWP surface water and concomitant depletion in East Asian precipitation as recorded in Chinese speleothems. Using an isotope-enabled air–sea coupled model, we suggest that on precessional timescales, variations in IPWP upper OHC, more than surface temperature, act to amplify the ocean–continent hydrological cycle via the convergence of moisture and latent heat. From an energetic viewpoint, the coupling of upper OHC and monsoon variations, both coordinated by insolation changes on orbital timescales, is critical for regulating the global hydroclimate.
    Type: Article , PeerReviewed
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  • 5
    Publication Date: 2022-04-06
    Description: Nell’ambito del progetto EDISECUR, finanziato della regione Lazio, è stato sviluppato un prototipo di telesensore infrasonico, TIS, a tracciamento di speckle per la misura della velocità angolare, delle frequenze fondamentali e delle armoniche di una superficie sottoposta a oscillazioni. Il TIS si presta particolarmente per il rilevamento e il monitoraggio nel tempo degli edifici, ponti e altri manufatti. Conoscere lo stato vibrazionale di queste strutture può essere d’interesse sia per la loro caratterizzazione dinamica che per la sicurezza. Questo prototipo, sufficientemente compatto, si presta a una misura immediata della velocità angolare e, con semplici operazioni, si possono dedurre spostamenti e accelerazioni angolari. Dalle grandezze angolari e dalla conoscenza geometrica della superficie, tramite alcuni schemi ed esempi, si mostra come sia possibile determinare anche altri parametri cinematici lineari. Il telesensore può essere impiegato nelle misure delle vibrazioni di superfici a lunga distanza di varia natura, anche laddove non fosse possibile accedere per eseguire una misura diretta. Lo strumento copre un campo di frequenze fino alle decine di Hz, ha una sensibilità e una dinamica tale da rilevare le vibrazioni indotte dal rumore industriale, dal traffico, dal vento e altro. Questo lavoro è principalmente rivolto alle applicazioni del TIS nel rilevamento delle vibrazioni delle strutture ed è in questo ambito che vengono spiegate le modalità, i limiti e i vantaggi del suo impiego insieme agli errori insiti nella tecnica di misura. Dato che il TIS misura un movimento relativo tra lo stesso strumento e la superficiebersaglio, sono stati valutati gli errori delle vibrazioni dovute alla microsismicità e altre cause ambientali. Vengono infine riportati due preliminari esempi di misura su una struttura edile.
    Description: Regione Lazio, progetto EDISECUR
    Description: Published
    Description: 1-36
    Description: 7TM.Sviluppo e Trasferimento Tecnologico
    Description: JCR Journal
    Keywords: Remote Sensor ; Vibration Detector
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 6
    Publication Date: 2022-04-11
    Description: L’Istituto Nazionale di Geofisica e Vulcanologia (INGV) riceve, nella Sala di Sorveglianza Sismica e Centro Allerta Tsunami di Roma, i segnali in tempo reale da centinaia di stazioni sismiche distribuite sul territorio nazionale. Entro due minuti dall’occorrenza di un qualsiasi terremoto, appositi sistemi automatici forniscono una prima valutazione dei parametri ipocentrali. Due sismologi, sempre presenti nella sala operativa della sede centrale, controllano le informazioni ottenute e, per i terremoti sopra una determinata soglia di magnitudo (ML ≥ 2.5), comunicano alla Sala Situazione Italia della Protezione Civile i dati elaborati, in media in circa 12 minuti (massimo entro 30 minuti) [Margheriti et al., 2021]. La valutazione definitiva dei parametri ipocentrali di tutti i terremoti, dai più grandi avvertiti in vaste aree del territorio ai più piccoli rilevati solo da pochi strumenti, è demandata a un’analisi più accurata svolta in un secondo tempo, ormai da alcuni decenni, da un gruppo di analisti specializzati nell’interpretazione dei segnali sismici. Gli analisti sismologi del Bollettino Sismico Italiano revisionano tutti i dati registrati dalle stazioni della Rete Sismica Nazionale (RSN) dell’INGV e riconoscono la presenza di terremoti attraverso un’analisi diretta delle forme d’onda. In tal modo l’analista rileva il tempo d’arrivo delle onde sismiche ai vari sensori e valuta l’ampiezza delle oscillazioni e la direzione del moto del suolo; questi parametri, utilizzati da apposite procedure di calcolo, consentono di localizzare ogni terremoto e di valutare la magnitudo associata. Le informazioni così ottenute confluiscono nel database che l’INGV gestisce e che mette a disposizione della comunità1. Questa pubblicazione ha come scopo quello di far conoscere un prodotto dell’Istituto Nazionale di Geofisica e Vulcanologia, Il Bollettino Sismico Italiano (BSI), con particolare riferimento all’anno 2015. Saranno delineate le principali caratteristiche della sismicità naturale e quella di origine antropica registrata in Italia nel corso dell’anno esaminato.
    Description: Published
    Description: 1-48
    Description: 4IT. Banche dati
    Description: JCR Journal
    Keywords: Bollettino Sismico Italiano 2015 ; Italian Seismic Bulletin 2015 ; sequences and seismic swarms ; explosion ; 04. Solid Earth::04.06. Seismology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 7
    Publication Date: 2022-03-02
    Description: Crystalline rocks can produce dangerous radiation levels on the basis of their content in radioisotopes. Here, we report radiological data from 10 metamorphic and igneous rock samples collected from the crystalline basement of the Peloritani Mountains (southern Italy). In order to evaluate the radiological properties of these rocks, the gamma radiation and the radon emanation have been measured. Moreover, since some of these rocks are employed as building materials, we assess the potential hazard for population connected to their use. Gamma spectroscopy was used to measure the 226Ra, 232Th and 40K activity concentration, whereas the radon emanation was investigated by using a RAD 7 detector. The results show 226Ra, 232Th and 40K activity concentration values ranging from (17 ± 4) to (56 ± 8) Bq kg-1, (14 ± 3) to (77 ± 14) Bq kg-1 and (167 ± 84) to (1760 ± 242) Bq kg-1, respectively. Values of the annual effective dose equivalent outdoor range from 0.035 to 0.152 mSv y-1, whereas the gamma index is in the range of 0.22-0.98. The 222Rn emanation coefficient and the 222Rn surface exhalation rate vary from (0.63 ± 0.3) to (8.27 ± 1.6)% and from (0.12 ± 0.03) to (2.75 ± 0.17) Bq m-2 h-1, respectively. The indoor radon derived from the building use of these rocks induces an approximate contribution to the annual effective dose ranging from 8 to 176 μSv y-1. All the obtained results suggest that the crystalline rocks from the Peloritani Mountains are not harmful for the residential population, even though they induce annual effective doses due to terrestrial gamma radiation above the worldwide average values. Moreover, their use as building materials does not produce significant health hazards connected to the indoor radon exposure.
    Description: Published
    Description: 452–464
    Description: 6A. Geochimica per l'ambiente e geologia medica
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 8
    Publication Date: 2022-03-07
    Description: The Pollino range is a region of slow deformation where earthquakes generally nucleate on low-angle normal faults. Recent studies have mapped fault structures and identified fluid related dynamics responsible for historical and recent seismicity in the area. Here, we apply the coda-normalization method at multiple frequencies and scales to image the 3-D P-wave attenuation (QP) properties of its slowly deforming fault network. The wide-scale average attenuation properties of the Pollino range are typical for a stable continental block, with a dependence of QP on frequency of Q−1 P = (0.0011   0.0008) f (0.36 0.32). Using only waveforms comprised in the area of seismic swarms, the dependence of attenuation on frequency increases [Q−1 P = (0.0373   0.0011) f (−0.59 0.01)], as expected when targeting seismically active faults. A shallow very-low-attenuation anomaly (max depth of 4–5 km) caps the seismicity recorded within the western cluster 1 of the Pollino seismic sequence (2012, maximum magnitude Mw = 5.1). High-attenuation volumes below this anomaly are likely related to fluid storage and comprise the western and northern portions of cluster 1 and the Mercure basin. These anomalies are constrained to the NW by a sharp low-attenuation interface, corresponding to the transition towards the eastern unit of the Apennine Platform under the Lauria mountains. The low-seismicity volume between cluster 1 and cluster 2 (maximum magnitude Mw = 4.3, east of the primary) shows diffuse low-to-average attenuation features. There is no clear indication of fluid-filled pathways between the two clusters resolvable at our resolution. In this volume, the attenuation values are anyway lower than in recognized low-attenuation blocks, like the Lauria Mountain and Pollino Range. As the volume develops in a region marked at surface by small-scale cross-faulting, it suggests no actual barrier between clusters, more likely a system of small locked fault patches that can break in the future. Our model loses resolution at depth, but it can still resolve a 5-to-15-km-deep high-attenuation anomaly that underlies the Castrovillari basin. This anomaly is an ideal deep source for the SE-to-NW migration of historical seismicity. Our novel deep structural maps support the hypothesis that the Pollino sequence has been caused by a mechanism of deep and lateral fluid-induced migration.
    Description: Natural Environment Research Council (NERC) Centre for Doctoral Training (CDT) in Oil and Gas. University of Aberdeen.
    Description: Published
    Description: 536–547
    Description: 4T. Sismicità dell'Italia
    Description: JCR Journal
    Keywords: body waves ; seismic attenuation ; seismic tomography ; 04.06. Seismology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 9
    Publication Date: 2022-03-07
    Description: This study represents the first attempt to combine the geomorphological characteristics of the island of Ustica with the human settlements that have been established during prehistory, with the purpose of reconstructing the interactions between communities and the natural environment from the Neolithic to the Middle Bronze Age (6th - 1st millennia B.C.). Ustica is a small island in the Southern Tyrrhenian Sea, visible but far (~55 km) from the northern coast of western Sicily. Its rugged volcanic nature, remodeled and enriched by the sea, offered to the first colonizers a wide repertoire of opportunities and challenges. This island can be treated as an ideal “laboratory” to understand how settlers, taking their first steps towards the foundation of organized communities, were able to seize opportunities or succumb to obstacles. The review of archaeological research until now carried out in Ustica, integrated with geomorphological data and other biogeographical indicators, offers a picture of the prehistory of Ustica in which human presence is continuous and distributed in various sites of the island characterized by different physiographic characteristics. There are phases dominated by the choice of naturally protected sites and phases in which settlements expands on open land, suitable for agricultural use. Where the archaeological evidence is scarce, the geomorphological peculiarities allow us to decipher the vocations and characters of a human settlement. The study leads to an open question: in the Middle Bronze Age, after about five thousand years of uninterrupted habitation of Ustica, which factors, geological, social, or other, induced the early communities to abandon the island, without returning there for about eight centuries, until the Hellenistic-Roman age?
    Description: Published
    Description: VO550
    Description: 6A. Geochimica per l'ambiente e geologia medica
    Description: JCR Journal
    Keywords: Geoarchaeology ; Geoarchaeology ; Prehistoric Settlements ; Island Archaeology ; Volcanic Landscape
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 10
    Publication Date: 2022-03-09
    Description: This work sets out to identify a state-of-the-art system to be used for the calibration of seismic sensors. The aim is to acquire such a system within the framework of the PON ARS01 00926 EWAS (an Early Warning System for cultural heritage) project, which seeks to develop new technologies for the protection, conservation and safety of cultural heritage and envisages creating a newly developed seismic monitoring system. This system will exploit the ETL3D/5s-H hybrid sensors, resulting from the integration of a precision accelerometer within the ETL3D/5s velocimeter [Fertitta et al., 2020]. The new calibration system, already acquired and being installed, can be used by the EWAS project partners (including the National Institute of Geophysics and Volcanology and the Kore University of Enna), to calibrate the ETL3D/5s-H sensors, and by external organisations to calibrate or gauge other seismic sensors, thus providing a useful service to the scientific community and supporting industrial activities. This paper presents the method used and the activities undertaken to define the technical specifications of the calibration system. A feasibility study of an electromechanical vibrating table and the testing of two electrodynamic calibration systems were carried out. One of the electrodynamic systems is the CS18P (Calibration System for Seismic Sensors) produced by the German firm SPEKTRA. The CS18P comprises two vibrating tables, one horizontal and one vertical, which, thanks to their fluid-dynamic suspension, eliminate the sliding and rolling friction associated with the movement of the moving part with respect to the fixed part. A hardware and software system monitors and controls the motion in real time, analyses the data and automatically processes a predefined set of measurements. In the light of the technical specifications and experimental results, the CS18P represents the ideal solution for the aims of the EWAS project and also in view of the possible future uses of the calibration system.
    Description: Published
    Description: 1-38
    Description: 2IT. Laboratori analitici e sperimentali
    Description: JCR Journal
    Keywords: Seismic sensors calibration, Vibration exciter, Seismometer
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 11
    Publication Date: 2022-04-29
    Description: In recent years, new approaches for developing earthquake rupture forecasts (ERFs) have been proposed to be used as an input for probabilistic seismic hazard assessment (PSHA). Zone- based approaches with seismicity rates derived from earthquake catalogs are commonly used in many countries as the standard for national seismic hazard models. In Italy, a single zone- based ERF is currently the basis for the official seismic hazard model. In this contribution, we present eleven new ERFs, including five zone-based, two smoothed seismicity-based, two fault- based, and two geodetic-based, used for a new PSH model in Italy. The ERFs were tested against observed seismicity and were subject to an elicitation procedure by a panel of PSHA experts to verify the scientific robustness and consistency of the forecasts with respect to the observations. Tests and elicitation were finalized to weight the ERFs. The results show a good response to the new inputs to observed seismicity in the last few centuries. The entire approach was a first attempt to build a community-based set of ERFs for an Italian PSHA model. The project involved a large number of seismic hazard practitioners, with their knowledge and experience, and the development of different models to capture and explore a large range of epistemic uncertainties in building ERFs, and represents an important step forward for the new national seismic hazard model.
    Description: Published
    Description: SE220
    Description: 6T. Studi di pericolosità sismica e da maremoto
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 12
    Publication Date: 2022-05-25
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Malige, F., Patris, J., Buchan, S. J., Stafford, K. M., Shabangu, F., Findlay, K., Hucke-Gaete, R., Neira, S., Clark, C. W., & Glotin, H. Inter-annual decrease in pulse rate and peak frequency of Southeast Pacific blue whale song types. Scientific Reports, 10(1), (2020): 8121, doi:10.1038/s41598-020-64613-0.
    Description: A decrease in the frequency of two southeast Pacific blue whale song types was examined over decades, using acoustic data from several different sources in the eastern Pacific Ocean ranging between the Equator and Chilean Patagonia. The pulse rate of the song units as well as their peak frequency were measured using two different methods (summed auto-correlation and Fourier transform). The sources of error associated with each measurement were assessed. There was a linear decline in both parameters for the more common song type (southeast Pacific song type n.2) between 1997 to 2017. An abbreviated analysis, also showed a frequency decline in the scarcer southeast Pacific song type n.1 between 1970 to 2014, revealing that both song types are declining at similar rates. We discussed the use of measuring both pulse rate and peak frequency to examine the frequency decline. Finally, a comparison of the rates of frequency decline with other song types reported in the literature and a discussion on the reasons of the frequency shift are presented.
    Description: The authors thank the help of Explorasub diving center (Chile), Agrupación turística Chañaral de Aceituno (Chile), ONG Eutropia (Chile), Valparaiso university (Chile), the international institutions and research programs CTBTO, IWC, BRILAM STIC AmSud 17-STIC-01. S.J.B. thanks support from the Center for Oceanographic Research COPAS Sur-Austral, CONICYT PIA PFB31, Biology Department of Woods Hole Oceanographic Institution, the Office of Naval Research Global (awards N62909-16-2214 and N00014-17-2606), and a grant to the Centro de Estudios Avanzados en Zonas Ãridas (CEAZA) “Programa Regional CONICYT R16A10003”. We thank SABIOD MI CNRS, EADM MaDICS CNRS and ANR-18-CE40-0014 SMILES supporting this research. We are grateful to colleagues at DCLDE 2018 and SOLAMAC 2018 conferences for useful comments on the preliminary version of this work. In this work we used only the free and open-source softwares Latex, Audacity and OCTAVE.
    Repository Name: Woods Hole Open Access Server
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  • 13
    Publication Date: 2022-05-25
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Ward, N. D., Megonigal, J. P., Bond-Lamberty, B., Bailey, V. L., Butman, D., Canuel, E. A., Diefenderfer, H., Ganju, N. K., Goni, M. A., Graham, E. B., Hopkinson, C. S., Khangaonkar, T., Langley, J. A., McDowell, N. G., Myers-Pigg, A. N., Neumann, R. B., Osburn, C. L., Price, R. M., Rowland, J., Sengupta, A., Simard, M., Thornton, P. E., Tzortziou, M., Vargas, R., Weisenhorn, P. B., & Windham-Myers, L. Representing the function and sensitivity of coastal interfaces in earth system models. Nature Communications, 11(1), (2020): 2458, doi:10.1038/s41467-020-16236-2.
    Description: Between the land and ocean, diverse coastal ecosystems transform, store, and transport material. Across these interfaces, the dynamic exchange of energy and matter is driven by hydrological and hydrodynamic processes such as river and groundwater discharge, tides, waves, and storms. These dynamics regulate ecosystem functions and Earth’s climate, yet global models lack representation of coastal processes and related feedbacks, impeding their predictions of coastal and global responses to change. Here, we assess existing coastal monitoring networks and regional models, existing challenges in these efforts, and recommend a path towards development of global models that more robustly reflect the coastal interface.
    Description: Funding for this work was provided by Pacific Northwest National Laboratory (PNNL) Laboratory Directed Research & Development (LDRD) as part of the Predicting Ecosystem Resilience through Multiscale Integrative Science (PREMIS) Initiative. PNNL is operated by Battelle for the U.S. Department of Energy under Contract DE-AC05-76RL01830. Additional support to J.P.M. was provided by the NSF-LTREB program (DEB-0950080, DEB-1457100, DEB-1557009), DOE-TES Program (DE-SC0008339), and the Smithsonian Institution. This manuscript was motivated by discussions held by co-authors during a three-day workshop at PNNL in Richland, WA: The System for Terrestrial Aquatic Research (STAR) Workshop: Terrestrial-Aquatic Research in Coastal Systems. The authors thank PNNL artist Nathan Johnson for preparing the figures in this manuscript and Terry Clark, Dr. Charlette Geffen, and Dr. Nancy Hess for their aid in organizing the STAR workshop. The authors thank all workshop participants not listed as authors for their valuable insight: Lihini Aluwihare (contributed to biogeochemistry discussions and development of concept for Fig. 3), Gautam Bisht (contributed to modeling discussion), Emmett Duffy (contributed to observational network discussions), Yilin Fang (contributed to modeling discussion), Jeremy Jones (contributed to biogeochemistry discussions), Roser Matamala (contributed to biogeochemistry discussions), James Morris (contributed to biogeochemistry discussions), Robert Twilley (contributed to biogeochemistry discussions), and Jesse Vance (contributed to observational network discussions). A full report on the workshop discussions can be found at https://www.pnnl.gov/publications/star-workshop-terrestrial-aquatic-research-coastal-systems.
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  • 14
    Publication Date: 2022-05-25
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Liang, Y., Lo, M., Lan, C., Seo, H., Ummenhofer, C. C., Yeager, S., Wu, R., & Steffen, J. D. Amplified seasonal cycle in hydroclimate over the Amazon river basin and its plume region. Nature Communications, 11(1), (2020): 4390, doi:10.1038/s41467-020-18187-0.
    Description: The Amazon river basin receives ~2000 mm of precipitation annually and contributes ~17% of global river freshwater input to the oceans; its hydroclimatic variations can exert profound impacts on the marine ecosystem in the Amazon plume region (APR) and have potential far-reaching influences on hydroclimate over the tropical Atlantic. Here, we show that an amplified seasonal cycle of Amazonia precipitation, represented by the annual difference between maximum and minimum values, during the period 1979–2018, leads to enhanced seasonalities in both Amazon river discharge and APR ocean salinity. An atmospheric moisture budget analysis shows that these enhanced seasonal cycles are associated with similar amplifications in the atmospheric vertical and horizontal moisture advections. Hierarchical sensitivity experiments using global climate models quantify the relationships of these enhanced seasonalities. The results suggest that an intensified hydroclimatological cycle may develop in the Amazonia atmosphere-land-ocean coupled system, favouring more extreme terrestrial and marine conditions.
    Description: M.-H.L., C.-W.L., and R.-J.W. are supported by the Ministry of Science and Technology in Taiwan under grant 106-2111-M-002-010-MY4. H.S. and J.D.S. are grateful for support from NOAA NA19OAR4310376 and NA17OAR4310255. C.C.U. acknowledges support from the U.S. National Science Foundation under grant OCE-1663704. The National Center for Atmospheric Research (NCAR) is a major facility sponsored by the US National Science Foundation (NSF) under Cooperative Agreement No. 1852977. We thank Dr. Young-Oh Kwon at Woods Hole Oceanographic Institution and Dr. Who Kim at NCAR for discussions about the ocean model experiment design. We thank Dr. Mehnaz Rashid at National Taiwan University and Wen-Yin Wu at the University of Texas at Austin in helping generate the high-resolution Amazon river mask. We also thank Dr. Gael Forget at Massachusetts Institue of Technology for comments on using ECCO and other ocean-state estimate products.
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  • 15
    Publication Date: 2022-05-25
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Carroll, E. L., Ott, P. H., McMillan, L. F., Galletti Vernazzani, B., Neveceralova, P., Vermeulen, E., Gaggiotti, O. E., Andriolo, A., Baker, C. S., Bamford, C., Best, P., Cabrera, E., Calderan, S., Chirife, A., Fewster, R. M., Flores, P. A. C., Frasier, T., Freitas, T. R. O., Groch, K., Hulva, P., Kennedy, A., Leaper, R., Leslie, M. S., Moore, M., Oliveira, L., Seger, J., Stepien, E. N., Valenzuela, L. O., Zerbini, A., & Jackson, J. A. Genetic diversity and connectivity of southern right whales (Eubalaena australis) found in the Brazil and Chile-Peru wintering grounds and the South Georgia (Islas Georgias del Sur) feeding ground. Journal of Heredity, 111(3), (2020): 263-276, doi:10.1093/jhered/esaa010.
    Description: As species recover from exploitation, continued assessments of connectivity and population structure are warranted to provide information for conservation and management. This is particularly true in species with high dispersal capacity, such as migratory whales, where patterns of connectivity could change rapidly. Here we build on a previous long-term, large-scale collaboration on southern right whales (Eubalaena australis) to combine new (nnew) and published (npub) mitochondrial (mtDNA) and microsatellite genetic data from all major wintering grounds and, uniquely, the South Georgia (Islas Georgias del Sur: SG) feeding grounds. Specifically, we include data from Argentina (npub mtDNA/microsatellite = 208/46), Brazil (nnew mtDNA/microsatellite = 50/50), South Africa (nnew mtDNA/microsatellite = 66/77, npub mtDNA/microsatellite = 350/47), Chile–Peru (nnew mtDNA/microsatellite = 1/1), the Indo-Pacific (npub mtDNA/microsatellite = 769/126), and SG (npub mtDNA/microsatellite = 8/0, nnew mtDNA/microsatellite = 3/11) to investigate the position of previously unstudied habitats in the migratory network: Brazil, SG, and Chile–Peru. These new genetic data show connectivity between Brazil and Argentina, exemplified by weak genetic differentiation and the movement of 1 genetically identified individual between the South American grounds. The single sample from Chile–Peru had an mtDNA haplotype previously only observed in the Indo-Pacific and had a nuclear genotype that appeared admixed between the Indo-Pacific and South Atlantic, based on genetic clustering and assignment algorithms. The SG samples were clearly South Atlantic and were more similar to the South American than the South African wintering grounds. This study highlights how international collaborations are critical to provide context for emerging or recovering regions, like the SG feeding ground, as well as those that remain critically endangered, such as Chile–Peru.
    Description: This work was supported by the EU BEST 2.0 medium grant 1594 and UK DARWIN PLUS grant 057 and additional funding from the World Wildlife Fund GB107301. The collection of the Chile–Peru sample was supported by the Global Greengrants Fund and the Pacific Whale Foundation. The collection of the Brazilian samples was supported through grants by the Brazilian National Research Council to Paulo H. Ott (CNPq proc. n° 144064/98-7) and Paulo A.C. Flores (CNPq proc. n° 146609/1999-9) and with support from the World Wildlife Fund (WWF-Brazil). The collection of the South African samples was supported by the Global Greengrants Fund, the Pacific Whale Foundation and Charles University Grant Agency (1140217). E.L.C. was partially supported by a Rutherford Discovery Fellowship from the Royal Society of New Zealand. This study forms part of the Ecosystems component of the British Antarctic Survey Polar Sciences for Planet Earth Programme, funded by the Natural Environment Research Council.
    Keywords: population structure ; connectivity ; migration ; gene flow
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  • 16
    Publication Date: 2022-05-25
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Gravinese, P. M., Page, H. N., Butler, C. B., Spadaro, A. J., Hewett, C., Considine, M., Lankes, D., & Fisher, S. Ocean acidification disrupts the orientation of postlarval Caribbean spiny lobsters. Scientific Reports, 10(1), (2020): 18092, doi:10.1038/s41598-020-75021-9.
    Description: Anthropogenic inputs into coastal ecosystems are causing more frequent environmental fluctuations and reducing seawater pH. One such ecosystem is Florida Bay, an important nursery for the Caribbean spiny lobster, Panulirus argus. Although adult crustaceans are often resilient to reduced seawater pH, earlier ontogenetic stages can be physiologically limited in their tolerance to ocean acidification on shorter time scales. We used a Y-maze chamber to test whether reduced-pH seawater altered the orientation of spiny lobster pueruli toward chemical cues produced by Laurencia spp. macroalgae, a known settlement cue for the species. We tested the hypothesis that pueruli conditioned in reduced-pH seawater would be less responsive to Laurencia spp. chemical cues than pueruli in ambient-pH seawater by comparing the proportion of individuals that moved to the cue side of the chamber with the proportion that moved to the side with no cue. We also recorded the amount of time (sec) before a response was observed. Pueruli conditioned in reduced-pH seawater were less responsive and failed to select the Laurencia cue. Our results suggest that episodic acidification of coastal waters might limit the ability of pueruli to locate settlement habitats, increasing postsettlement mortality.
    Description: We thank the Steinwachs Family Foundation, which provided funding that supported Gravinese’s postdoctoral fellowship at Mote Marine Laboratory and Aquarium. We also acknowledge the partial support provided by the St. Petersburg College Titan Achievement minigrant program. Page was supported by a Mote Marine Laboratory and Aquarium Postdoctoral Research Fellowship. Postlarval spiny lobsters were collected with a state-issued Special Activity License (SAL-17-1868G-SR). We also thank those who helped with animal collection throughout this work including in-kind support provided by E. Muller and the Mote CAOS facility, as well as E. Bartels and C. Walter of the Coral Reef Monitoring and Assessment Program at Mote Marine Laboratory and Aquarium, as well as other field personnel including: L. Toth, S. Perry, T. Parker, A. Fine, L. Humphrey, and many undergraduate interns. We also thank L. Toth, E. Ross, B. Sharp, C. Crowley, J. Butler, and B. Crowder for editorial comments.
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  • 17
    Publication Date: 2022-05-25
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Huang, J., Pickart, R. S., Huang, R. X., Lin, P., Brakstad, A., & Xu, F. Sources and upstream pathways of the densest overflow water in the Nordic Seas. Nature Communications, 11(1), (2020): 5389, doi:10.1038/s41467-020-19050-y.
    Description: Overflow water from the Nordic Seas comprises the deepest limb of the Atlantic Meridional Overturning Circulation, yet questions remain as to where it is ventilated and how it reaches the Greenland-Scotland Ridge. Here we use historical hydrographic data from 2005-2015, together with satellite altimeter data, to elucidate the source regions of the Denmark Strait and Faroe Bank Channel overflows and the pathways feeding these respective sills. A recently-developed metric is used to calculate how similar two water parcels are, based on potential density and potential spicity. This reveals that the interior of the Greenland Sea gyre is the primary wintertime source of the densest portion of both overflows. After subducting, the water progresses southward along several ridge systems towards the Greenland-Scotland Ridge. Kinematic evidence supports the inferred pathways. Extending the calculation back to the 1980s reveals that the ventilation occurred previously along the periphery of the Greenland Sea gyre.
    Description: Funding for the study was provided by the US National Science Foundation under grants OCE-1558742 (J.H., R.P.) and OCE-1259618 (P.L.); the Bergen Research Foundation under grant BFS2016REK01 (A.B.); and the National Natural Science Foundation of China No. 41576018 (F.X.) and 41606020 (F.X.).
    Repository Name: Woods Hole Open Access Server
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  • 18
    Publication Date: 2022-05-25
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Colin, S. P., Costello, J. H., Sutherland, K. R., Gemmell, B. J., Dabiri, J. O., & Du Clos, K. T. The role of suction thrust in the metachronal paddles of swimming invertebrates. Scientific Reports, 10(1), (2020): 17790, doi:10.1038/s41598-020-74745-y.
    Description: An abundance of swimming animals have converged upon a common swimming strategy using multiple propulsors coordinated as metachronal waves. The shared kinematics suggest that even morphologically and systematically diverse animals use similar fluid dynamic relationships to generate swimming thrust. We quantified the kinematics and hydrodynamics of a diverse group of small swimming animals who use multiple propulsors, e.g. limbs or ctenes, which move with antiplectic metachronal waves to generate thrust. Here we show that even at these relatively small scales the bending movements of limbs and ctenes conform to the patterns observed for much larger swimming animals. We show that, like other swimming animals, the propulsors of these metachronal swimmers rely on generating negative pressure along their surfaces to generate forward thrust (i.e., suction thrust). Relying on negative pressure, as opposed to high pushing pressure, facilitates metachronal waves and enables these swimmers to exploit readily produced hydrodynamic structures. Understanding the role of negative pressure fields in metachronal swimmers may provide clues about the hydrodynamic traits shared by swimming and flying animals.
    Description: This work was funded by National Science Foundation (NSF OCE 1829913 to SPC), the Alfred P. Sloan Foundation (to BJG) and the Gordon and Betty Moore Foundation (8835 to KRS). The work was also supported by the Roger Williams Foundation to Promote Scholarship and Teaching.
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  • 19
    Publication Date: 2022-05-25
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Wiechmann, A. F., Martin, T. A., & Horb, M. E. CRISPR/Cas9 mediated mutation of the mtnr1a melatonin receptor gene causes rod photoreceptor degeneration in developing Xenopus tropicalis. Scientific Reports, 10(1), (2020): 13757, doi:10.1038/s41598-020-70735-2.
    Description: Nighttime surges in melatonin levels activate melatonin receptors, which synchronize cellular activities with the natural light/dark cycle. Melatonin receptors are expressed in several cell types in the retina, including the photon-sensitive rods and cones. Previous studies suggest that long-term photoreceptor survival and retinal health is in part reliant on melatonin orchestration of circadian homeostatic activities. This scenario would accordingly envisage that disruption of melatonin receptor signaling is detrimental to photoreceptor health. Using in vivo CRISPR/Cas9 genomic editing, we discovered that a small deletion mutation of the Mel1a melatonin receptor (mtnr1a) gene causes a loss of rod photoreceptors in retinas of developing Xenopus tropicalis heterozygous, but not homozygous mutant tadpoles. Cones were relatively spared from degeneration, and the rod loss phenotype was not obvious after metamorphosis. Localization of Mel1a receptor protein appeared to be about the same in wild type and mutant retinas, suggesting that the mutant protein is expressed at some level in mutant retinal cells. The severe impact on early rod photoreceptor viability may signify a previously underestimated critical role in circadian influences on long-term retinal health and preservation of sight. These data offer evidence that disturbance of homeostatic, circadian signaling, conveyed through a mutated melatonin receptor, is incompatible with rod photoreceptor survival.
    Description: The National Xenopus Resource (NXR) Genome Editing Workshop conducted at the Marine Biological Laboratory (MBL) contributed to the early development of this project (A.F.W. & M.E.H). We thank Dr. Marcin Wlizla, Sean McNamara, Rosie Falco, and Dr. Will Ratzen of the NXR and MBL for their advice and assistance with the F0 founders. We thank Cynthia Bulmer of the NIH Diabetes CoBRE (P20GM104934) Core Histology Facility at the University of Oklahoma Health Sciences Center (OUHSC) for preparing the histology specimens. We thank Dr. David Sherry of OUHSC for critically reading the initial version of the manuscript and his helpful advice during this study.
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  • 20
    Publication Date: 2022-05-25
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Dzwonkowski, B., Coogan, J., Fournier, S., Lockridge, G., Park, K., & Lee, T. Compounding impact of severe weather events fuels marine heatwave in the coastal ocean. Nature Communications, 11(1), (2020): 4623, doi:10.1038/s41467-020-18339-2.
    Description: Exposure to extreme events is a major concern in coastal regions where growing human populations and stressed natural ecosystems are at significant risk to such phenomena. However, the complex sequence of processes that transform an event from notable to extreme can be challenging to identify and hence, limit forecast abilities. Here, we show an extreme heat content event (i.e., a marine heatwave) in coastal waters of the northern Gulf of Mexico resulted from compounding effects of a tropical storm followed by an atmospheric heatwave. This newly identified process of generating extreme ocean temperatures occurred prior to landfall of Hurricane Michael during October of 2018 and, as critical contributor to storm intensity, likely contributed to the subsequent extreme hurricane. This pattern of compounding processes will also exacerbate other environmental problems in temperature-sensitive ecosystems (e.g., coral bleaching, hypoxia) and is expected to have expanding impacts under global warming predictions.
    Description: This work would not have been possible without the help of the Tech Support Group at the Dauphin Island Sea Lab. A portion of this work was conducted at the Jet Propulsion Laboratory, California Institute of Technology, under contract with NASA. This research was made possible by the NOAA RESTORE Science Program (NA17NOS4510101 and NA19NOS4510194) and NOAA NGI NMFS Regional Collaboration Network (18-NGI3-61).
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  • 21
    Publication Date: 2022-03-16
    Description: This article has been accepted for publication in Geophysical Journal International ©: The Authors 2021. Published by Oxford University Press on behalf of the Royal Astronomical Society. All rights reserved. Uploaded in accordance with the publisher's self-archiving policy.
    Description: In a recent study (Jozinovi\'c et al, 2020) we showed that convolutional neural networks (CNNs) applied to network seismic traces can be used for rapid prediction of earthquake peak ground motion intensity measures (IMs) at distant stations using only recordings from stations near the epicenter. The predictions are made without any previous knowledge concerning the earthquake location and magnitude. This approach differs from the standard procedure adopted by earthquake early warning systems (EEWSs) that rely on location and magnitude information. In the previous study, we used 10 s, raw, multistation waveforms for the 2016 earthquake sequence in central Italy for 915 events (CI dataset). The CI dataset has a large number of spatially concentrated earthquakes and a dense station network. In this work, we applied the CNN model to an area around the VIRGO gravitational waves observatory sited near Pisa, Italy. In our initial application of the technique, we used a dataset consisting of 266 earthquakes recorded by 39 stations. We found that the CNN model trained using this smaller dataset performed worse compared to the results presented in the original study by Jozinovi\'c et al. (2020). To counter the lack of data, we adopted transfer learning (TL) using two approaches: first, by using a pre-trained model built on the CI dataset and, next, by using a pre-trained model built on a different (seismological) problem that has a larger dataset available for training. We show that the use of TL improves the results in terms of outliers, bias, and variability of the residuals between predicted and true IMs values. We also demonstrate that adding knowledge of station positions as an additional layer in the neural network improves the results. The possible use for EEW is demonstrated by the times for the warnings that would be received at the station PII.
    Description: RISE (Union's Horizon 2020 research and innovation programme, grant agreement No.821115)
    Description: Published
    Description: 704–718
    Description: 5T. Sismologia, geofisica e geologia per l'ingegneria sismica
    Description: JCR Journal
    Keywords: Physics - Geophysics; Physics - Geophysics ; machine learning ; ground motion prediction ; seismology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 22
    Publication Date: 2022-03-16
    Description: Mobile network routers in seismic and volcanic surveillance
    Description: Published
    Description: 1-36
    Description: 1IT. Reti di monitoraggio e sorveglianza
    Description: N/A or not JCR
    Keywords: mobile ; router ; cellulare ; sourveillance ; router ; sorveglianza ; 05.04. Instrumentation and techniques of general interest ; 04.08. Volcanology ; 04.06. Seismology
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  • 23
    Publication Date: 2022-03-17
    Description: This special issue of “Annals of Geophysics” concerns the dissemination of knowledge on the prevention of damage mainly due to non-structural elements during earthquakes and its practical application at houses, schools and offices by common citizens, companies and institutions. The seismic capacity of buildings and other civil engineering structures and infrastructures are object of regulations for design and construction, and in some cases also the design, fabrication and mounting of electrical and mechanical equipments. Consequently, even in strong earthquakes many collapses of buildings and infrastructures are avoided. However, with few exceptions, design procedures do not aim at avoiding seismic vibrations from being transferred to the structures, but enable the structures to resist to the effects of those vibrations
    Description: European Commission’s Humanitarian Aid and Civil Protection (Grant agreement ECHO/SUB/2015/718655/PREV28)
    Description: Published
    Description: SE331
    Description: 3TM. Comunicazione
    Description: JCR Journal
    Keywords: Risk reduction ; risk communication ; non-structural elements
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 24
    Publication Date: 2022-03-17
    Description: Encouraging property owners and individuals to adopt mitigation measures to improve the resilience of their buildings and equipments to seismic hazard has been a major challenge in many earthquake- prone countries. Few business leaders are aware of the fragility of their supply chains or other critical systems due to earthquake hazard. Bridging the gap between research production and research use is another crucial challenge for the earthquake risk research process. The KnowRISK project outcome is aimed at encouraging the proactive engagement of multi- stakeholders (community at large, schools, business community and local govern-ment groups) undertaking non-structural mitigation measures that will minimize earthquake losses to individuals and communities. Engaging stakeholders, taking into account their needs and inputs to maintain critical and urgent business activities, can contribute to the research findings and ensure that our data collection is thorough and complete. Engagement with stakeholders, during the whole process can lead to improved outcomes and for the development of viable solutions, for business and society, because of stakeholder’s role and influence within the organizations.
    Description: European Commission’s Humanitarian Aid and Civil Protection (Grant agreement ECHO/SUB/2015/718655/PREV28)
    Description: Published
    Description: SE324
    Description: 5T. Sismologia, geofisica e geologia per l'ingegneria sismica
    Description: JCR Journal
    Keywords: Business Continuity ; critical infrastructures ; earthquake ; resilience ; non-structural elements ; 05.08. Risk
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 25
    Publication Date: 2022-03-22
    Description: The focus of this study is the analysis of a cave in Central Italy, the Beatrice Cenci cave, in order topoint out and constrain evidence of possible past earthquakes and of fault activity in the area. Weperformed a survey of seismic related damages within the cave. This included the analysis ofbroken/collapsed speleothems, the recognition of structural collapse, of tilting/growth alteration inthe speleothems, and the mapping of fractures, joints and/or faults. To timely set the occurrence ofthe recognized damage, organic sediments were dated with 14C radiocarbon method. The resultsmerged toward the recognition of two distinct seismic shaking events affecting the caveenvironment, one older than 30 kyr and another around 7 kyr. The deformation observed withinthe cave led us to the hypothesis that the events of damage were possibly linked to the activity ofthe regional tectonic lineament that crosses the cave, i.e., the Liri normal fault. The morphology andthe evolution of the cave appear controlled by the fault zone. These speleoseismological resultsprovided a new contribution on the knowledge of the past activity of the Liri fault and on theearthquake history of this sector of Central Apennines.
    Description: INGV
    Description: Published
    Description: SE435
    Description: 2T. Deformazione crostale attiva
    Description: JCR Journal
    Keywords: Speleothems; ; Earthquakes ; Speleoseismology ; Liri Fault ; Tectonic activity ; Central Italy ; Speleoseismology, active tectonic
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  • 26
    Publication Date: 2021-11-25
    Description: Il presente lavoro raccoglie alcune esperienze di Progetti di Alternanza Scuola Lavoro (d’ora in poi ASL) realizzati dall’INGV negli anni scolastici dal 2015 al 2019 e dedicati al rischio sismico, alle scienze polari ed agli strumenti per la divulgazione scientifica. Le esperienze descrivono il lavoro realizzato da un gruppo di ricercatori INGV con competenze in diversi ambiti disciplinari (sismologia, geologia, vulcanologia fisica dell’atmosfera, psicologia) e in alcuni casi le attività sono state svolte in collaborazione con ricercatori di altri enti. Il gruppo di lavoro è composto da ricercatori che da molti anni dedicano parte del loro tempo-lavoro alle attività di divulgazione scientifica, ai progetti educativi, alla didattica della scienza. In una parola a quella che oggi rappresenta, per gli enti di ricerca, la “Terza missione”, ovvero l’insieme di tutte le attività finalizzate a creare una connessione bidirezionale tra il mondo della ricerca e la società. Ciò che ha caratterizzato l’approccio dei ricercatori INGV ai progetti ASL, sia nella fase di progettazione che di realizzazione, è la finalità di consentire agli studenti di vivere un’esperienza reale ed immersiva in un contesto di lavoro. E quindi l’opportunità di sperimentare capacità e abilità che caratterizzano il contesto organizzativo (diritti, doveri, responsabilità, impegni, regole), diversamente dal mondo della scuola. Il secondo aspetto al quale ci si è riferiti nella realizzazione dei progetti è quello di consentire agli studenti di esplorare, in particolare il contesto delle attività lavorative connesse al mondo della ricerca. Da questo punto di vista gli studenti hanno potuto acquisire conoscenze in ambiti tematici specifici, hanno avuto modo di sperimentare metodi e tecniche proprie del mondo della ricerca e di acquisire capacità e abilità trasversali come il lavoro in gruppo. Il contributo è organizzato in tre capitoli in relazione ai temi affrontati nei progetti. Nel primo sono riportate le schede dei tre progetti dedicate al tema Terremoto; nel secondo vengono descritti i due progetti dedicati alla Divulgazione Scientifica e nel terzo un progetto sulle Scienze Polari. Per rendere maggiormente fruibile la lettura, ogni progetto viene descritto attraverso una scheda sintetica che evidenza le caratteristiche principali: titolo, referenti INGV, studenti partecipanti, periodo, descrizione delle attività, obiettivi e considerazioni sull’esperienza. Nel capitolo conclusivo viene proposto un bilancio delle esperienze realizzate, evidenziando punti di forza e aree di miglioramento dei progetti, con la finalità di condividere suggerimenti ed idee per tracciare percorsi formativi maggiormente efficaci nel futuro.
    Description: Published
    Description: 119-131
    Description: 2TM. Divulgazione Scientifica
    Description: N/A or not JCR
    Keywords: Percorsi formativi; rischio sismico; scienze polari ; 05.09. Miscellaneous
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  • 27
    Publication Date: 2021-12-13
    Description: “Move, protect, secure” were the three key points that the KnowRISK (Know your city, Reduce seISmic risK through non-structural elements) project posed at the core of its communication and dissemination strategy. This three key points enable each person, professional or not, to reduce non-structural damage caused by earthquakes. Dissemination is usually the last but never the least step of a communication plan, and indeed it played a crucial role in KnowRISK project for conveying the three key-point message to the widest audience. Standard dissemination activities, such as open-door events, and internet allowed us to achieve a wide spreading of ideas and best practices, reaching more than 4,000 non-professionals and almost 50,000 page views of the KnowRISK project website (in three years), respectively. As communication was recipient-targeted, the dissemination task of the project was addressed to professionals, layman, and schools. In particular, schools were chosen in order to profit from the chain-reaction action that is capable to spread a message from students to the surrounding environment.
    Description: This study was co-financed by the European Commission’s Humanitarian Aid and Civil Protection through the European project KnowRISK (Know your city, Reduce seISmic risK through non-structural elements; Grant agreement ECHO/SUB/2015/718655/PREV28).
    Description: Published
    Description: SE328
    Description: 6T. Studi di pericolosità sismica e da maremoto
    Description: JCR Journal
    Keywords: seismic risk ; data dissemination ; environmental risk ; educational issues ; 04.06. Seismology ; 05.08. Risk ; 05.03
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  • 28
    Publication Date: 2021-09-30
    Description: We present the commented transcription of three rare articles published in 19091910 by Father Atto Maccioni o.f.m. This friar is one of the least known among the many ecclesiastics who cultivated seismology from the 18th century onwards. Maccioni, from 1908 to 1926, managed a seismic observatory at the Sienese convent of the Osservanza. He devised an “Avvisatore”: a device equipped with a modified coherer with respect to those adopted in radiotelegraphic communications, aimed to detect natural radio signals associated with earthquakes. From the few available results it seems that the scholar obtained positive feedback, but the most interesting aspect of the story is that until now it was generally believed that this kind of research began only quite recently [Warwick, 1982]. On the contrary Maccioni may have been the first ever to study a possible electromagnetic precursor, more than a century ago.
    Description: Presentiamo la trascrizione commentata di tre rari articoli pubblicati nel 19091910 da padre Atto Maccioni o.f.m., uno dei meno noti tra i tanti ecclesiastici che si sono occupati di sismologia dal XVIII secolo in poi. Maccioni, che dal 1908 al 1926 gestì un osservatorio sismico presso il convento senese dell’Osservanza, aveva ideato l’Avvisatore, un dispositivo munito di un coherer diverso da quelli radiotelegrafici e destinato a rilevare segnali radio naturali associati ai terremoti. Dai pochi risultati disponibili sembra che lo studioso abbia avuto dei riscontri positivi ma l’aspetto più interessante della vicenda è che finora si era creduto che ricerche di questo tipo fossero iniziate solo molto di recente [Warwick, 1982]. Invece Maccioni potrebbe essere stato il primo al mondo a studiare, più di un secolo fa, un ipotetico precursore elettromagnetico.
    Description: Published
    Description: 1-32
    Description: 7T. Variazioni delle caratteristiche crostali e "precursori"
    Description: 2TM. Divulgazione Scientifica
    Description: N/A or not JCR
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  • 29
    Publication Date: 2022-02-16
    Description: La Cromatografia Ionica (IC) è diventata una delle tecniche analitiche più utilizzate nella determinazione degli anioni (F-, Cl-, Br-, NO3-, SO42-) e dei cationi (Li+, Na+, K+, Mg2+, Ca2+) in soluzioni acquose, anche a basse concentrazioni. Nel Laboratorio dell’INGV Sezione di Palermo questa tecnica viene utilizzata per determinare la composizione chimica di acque naturali (acque sotterranee, termali, meteoriche, marine), di fluidi fumarolici, campionati tramite il metodo delle ampolle di Giggenbach e delle specie acide emesse dai pennacchi vulcanici campionati con trappole alcaline. Ogni anno nel laboratorio vengono analizzati numerosi campioni per scopi di ricerca e monitoraggio geochimico e ambientale. Uno dei principali problemi dell’attività analitica di routine è la valutazione della precisione del dato, definita dall’American Public Health Association [1999], “come la misura del grado di accordo tra analisi replicate di un campione, di solito espresse come deviazione standard”. Tralasciando I problemi di rappresentatività del campione, ci sono diversi fattori che contribuiscono alla precisione, come il pretrattamento del campione, la preparazione e conservazione delle miscele di calibrazione, la ripetibilità delle misure delle aree dei picchi delle miscele di calibrazione e il tipo di calibrazione. In questo lavoro mostriamo la precisione dei cromatografi Dionex ICS-1100 ripetendo più volte l’analisi le miscele di calibrazione durante una singola sessione analitica, e la ripetibilità dello strumento, elaborando I risultati ottenuti analizzando le stesse miscele di calibrazione in differenti sessioni analitiche nell’arco di 12 mesi. Infine, viene determinata l’accuratezza del metodo attraverso l’analisi di un campione certificato. L’accuratezza è la vicinanza tra il valore osservato ed il valore vero, o comunque accettato come tale. I dati riportati in questo rapporto tecnico si riferiscono alle condizioni analitiche per le analisi di routine, con la configurazione strumentale corrente in uso presso questo laboratorio; queste possono essere ottimizzate per altri range di utilizzo a condizione però che vengano eseguite le necessarie verifiche di precisione e accuratezza.
    Description: Istituto Nazionale di Geofisica e Vulcanologia (INGV) “Sez. di Palermo”
    Description: Published
    Description: 1-22
    Description: 2IT. Laboratori analitici e sperimentali
    Description: N/A or not JCR
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 30
    Publication Date: 2022-02-16
    Description: A new indirect method of estimating in situ soil air permeability is presented in this technical report. The new method is simply based on the measurement of air pressure (probe pressure) generated by pumping a constant air flux inside a special designed probe inserted into the soil. To calibrate the method, some measurements of the probe pressure were performed in some soils of the island of Vulcano, characterized by different values of the air permeability. Furthermore, technical aspects of a new device for performing continuous acquisition of the air permeability based on the new indirect method, were also described
    Description: Istituto Nazionale di Geofisica e Vulcanologia (INGV) “Sez. di Palermo”
    Description: Published
    Description: 1-18
    Description: 1IT. Reti di monitoraggio e sorveglianza
    Description: N/A or not JCR
    Keywords: Permeabilità all'aria dei suoli, Emissione dei gas dai suoli, Contenuto volumetrico d'acqua dei suoli, Soil air permeability, Soil gas emissions, Volumetric soil water content
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 31
    Publication Date: 2022-02-16
    Description: La determinazione di anioni inorganici nelle acque naturali, sotterranee e superficiali, cosi come nelle acque reflue e potabili, è una delle applicazioni più importanti della cromatografia ionica (IC). Con questa tecnica si possono comunemente determinare i principali anioni inorganici: fluoruro, cloruro, bromuro, nitrato e solfato. Utilizzando specifiche metodologie oltre ai predetti analiti, si può determinare anche il fosfato durante la medesima analisi. La determinazione dei fosfati nelle acque riveste una notevole importanza in considerazione del fatto che il fosfato rappresenta un possibile indice di inquinamento per la presenza di questa sostanza in moltissimi composti chimici, quali: detersivi domestici ed industriali, fertilizzanti ecc. La quantità di fosfati, nelle acque naturali, quando è di origine minerale e non indica inquinamento, raggiunge concentrazioni appena dosabili, mentre concentrazioni elevate e quindi misurabili, sono indice di inquinamento. Il fosfato è uno dei nutrienti di maggiore importanza nelle acque, la sua presenza in concentrazioni consistenti, può essere responsabile di manifestazioni eutrofiche ed ipertrofiche nelle acque superficiali. Data la sua importanza nel condizionare il funzionamento degli ecosistemi acquatici, esso è incluso nella lista dei cosiddetti macrodescrittori utilizzati per definire lo stato chimico delle acque fluviali e lacustri e per valutare, lo stato trofico delle acque. La determinazione del fosfato viene comunemente effettuata utilizzando l’analisi spettrofotometrica dell’eteropoliacido fosfomolibdico formatosi in seguito alla reazione con molibdato in ambiente acido ed in presenza di idoneo riducente. Tuttavia questo, metodo ampliamente utilizzato, consente la determinazione del singolo analita e non consente quindi la caratterizzazione chimica del campione. La cromatografia ionica, invece, presenta il vantaggio di essere una tecnica multi-elementare che consente di determinare in breve tempo tutti i costituenti maggiori disciolti nelle acque. In questo rapporto tecnico viene descritta la determinazione del fosfato e dei costituenti maggiori nelle acque naturali utilizzando, un cromatografo Thermo Scientific Dionex ICS 5000+, equipaggiato con una colonna a scambio anionico “Dionex AS19 4µm”, un generatore di eluente a idrossido di potassio (KOH), un soppressore elettrochimico ed un rivelatore a cella conduttimetrica.
    Description: Istituto Nazionale di Geofisica e Vulcanologia (INGV) “Sez. di Palermo”
    Description: Published
    Description: 1-22
    Description: 2IT. Laboratori analitici e sperimentali
    Description: N/A or not JCR
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 32
    Publication Date: 2022-02-17
    Description: Il sito delle “Ciampate del diavolo”, sul fianco nord­orientale del vulcano Roccamonfina, è un sito unico al Mondo grazie alle sue peculiarità geologiche ed antropologiche. Il ritrovamento di impronte di hominini al di sopra di un deposito ignimbritico, impresse in nel periodo di maggiore attività del vulcano, dà spazio a numerose questioni circa le condizioni paleoambientali esistenti sul vulcano ed i complessi processi che hanno permesso la formazione e la conservazione delle impronte. La nota dedica particolare attenzione al contesto dell’attività del vulcano ed alle caratteristiche della serie dei Tufi Leucitici Bruni, in quanto le impronte note come “Ciampate del diavolo” sono presenti sulla superficie di una delle unità più alte della sequenza di questi tufi. The “Ciampate del diavolo” geosite is unique in the World due to its geological and anthropological peculiarities. Finding hominin footprints on the ignimbrite deposits of 350,000 years ago, imprinted in the period of greatest activity of the volcano, opens up numerous questions about the palaeoenvironmental conditions of the volcano and the complex processes that allowed the generation and conservation of the footprints. The note pays particular attention to the framing of the volcano's activity and to the features of deposits of the Brown Leucitic Tuff series, as the human fossil footprints known as "Ciampate del Diavolo" are preserved on the surface of one of the highest units in the sequence.
    Description: Published
    Description: 49-55
    Description: 1V. Storia eruttiva
    Description: 5V. Processi eruttivi e post-eruttivi
    Description: 1TR. Georisorse
    Description: 6SR VULCANI – Servizi e ricerca per la società
    Description: N/A or not JCR
    Keywords: Stratigrafia ; Ignimbrite ; Eruzioni esplosive ; Volcano di Roccamonfina ; Tufo Leucitico Bruno
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 33
    Publication Date: 2022-02-25
    Description: Mts. Simbruini karst aquifer feeds important springs whose capture contributes to the water supply of Rome City. To improve the geochemical characterization of this aquifer, we analyzed 36 groundwater samples, 29 from springs and 7 from shallow wells, collected in 1996 and 2019. Atomic adsorption spectroscopy, titration, ionic chromatography and mass spectrometry were the used analytical methods. Groundwater is bicarbonate alkaline-earth type and HCO3- dominance confirms that the aquifer is hosted in carbonate rocks. Total alkalinity vs. cations plot indicates that CO2 driven weathering controls the water chemistry. The probability plots of HCO3-, cations and Ca2+ +Mg2+ indicate four groundwater populations with the less represented one (9 samples)characterized by the highest PCO2 values (〉 0.3 atm). Most anomalous values of the dissolved PCO2are from springs located near the center of the studied area. Four samples have negative values of𝛿13CCO2 (about -22‰ vs. PDB), indicating its organic origin, but two other samples have positivevalues (1.6 and 2.6 ‰ vs. PDB), similar to those observed in the CO2 of deep origin discharged atthe close Colli Albani volcano. Therefore, geochemical evidence indicates that the Mts. Simbruiniaquifer is locally affected by the input of deep originated CO2, likely rising up along fractures, interacting with a recharge of meteoric origin, as evidenced by its 𝛿2H and 𝛿18O isotopic signatures.
    Description: Published
    Description: HS659
    Description: 1TR. Georisorse
    Description: JCR Journal
    Keywords: Water resources ; Groundwater processes ; Chemistry of waters ; Hydrological processes: interaction, transport, dynamics; ; Fluid Geochemistry ; 04. Solid Earth ; 03.02. Hydrology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 34
    Publication Date: 2021-11-25
    Description: The best chance to achieve a future disaster-resilient society is through risk education in School: it has a great potential to strengthen capacity of communities to mitigate risks. The KnowRISK (Know your city, Reduce seISmic risK through non-structural elements) project took this opportunity and implemented a risk communication campaign for schools in Portugal, Italy, and Iceland. The idea was that suitably changes in people’s knowledge and attitude can trigger best practices. Crucial to reach such target is the raise of awareness on meaningful issues. The main challenge of the campaign was how to effectively address the mitigation of the vulnerability to earthquakes of non-structural elements, which is an issue considered to be of low priority even in the building regulations of many countries around the world. The campaign stood on a communication strategy that was systematized within a protocol, for 13- 15 years old students, that specifies goals, contents, learning strategy, support material, and relies on face-to-face intervention of scientists in the classroom. This protocol had training sessions bounded by assessment sessions, ex-ante and ex-post, that allowed to validate its efficacy. The training made large use of flipped learning and Episode of Situated Learning (EAS) strategy to raise student’s motivation and increase achievements. To ensure its replicability, the protocol was tested in zones matching a wide range of seismic hazard in Italy. The assessment showed the protocol be effective and ready for a wide dissemination.
    Description: Published
    Description: SE325
    Description: 2TM. Divulgazione Scientifica
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 35
    Publication Date: 2021-11-29
    Description: In aree di vulcanismo attivo e recente, oltre all’emissione di vapore e gas dai crateri centrali, si possono verificare emissioni di gas dal suolo che vengono rilasciati in modo diffuso o in mofete, o ancora che si disciolgono in acquiferi superficiali. Generalmente il gas più abbondante (fino al 99 vol.%) è l’anidride carbonica (CO2), ma in alcuni casi può essere anche il metano (CH4). La CO2 è un gas incolore e inodore che tende ad accumularsi in depressioni o scantinati dove ristagna in assenza di vento. Respirare aria con una concentrazione di anidride carbonica maggiore di 8 vol.% può condurre all’incoscienza o alla morte. Un esempio di quello che potrebbe accadere, anche se si tratta di un caso estremo, è rappresentato dal tragico evento avvenuto presso il lago Nyos in Camerun (un lago ospitato in un cratere vulcanico). Durante la notte del 21 agosto 1986 le acque del lago, sature di CO2, si rovesciarono improvvisamente e per decompressione si liberò una enorme quantità di gas che scese lungo i fianchi del cratere fino a raggiungere la valle sottostante dove vi era un villaggio. La nube di CO2, silenziosa e inodore, colse nel sonno gli abitanti e uccise circa 1700 persone e circa 3000 capi di bestiame [Barberi et al., 1986]. Numerosi incidenti dovuti all’inalazione di gas vulcanici sono avvenuti in varie altre parti del mondo, in particolare in Italia, Giappone, Nuova Zelanda [Hansell and Oppenheimer, 2004; Durand and Wilson, 2005] e nelle Isole Azzorre (Portogallo) [Viveiros et al., 2015]. Anche in Italia, purtroppo sono avvenuti diversi incidenti letali dovuti ad inalazione di CO2; si ricorda ad esempio che alla fine degli anni ’80 due bambini persero la vita nell’isola di Vulcano [Baubron et al., 1990] e ancora nel complesso vulcanico dei Colli Albani due uomini persero la vita, il primo a Cava dei Selci (frazione di Marino) nel 2000 e il secondo a Lavinio nel 2011 [Carapezza et al., 2003; Barberi et al., 2019]. Sempre in provincia di Roma, numerosi casi di intossicazione da CO2, che hanno altresì comportato l’evacuazione temporanea di alcune abitazioni, sono avvenuti per blowout (emissione incontrollata) di gas da pozzi d’acqua [Barberi et al., 2007; Carapezza et al., 2020]. La Campania ospita due dei vulcani quiescenti considerati tra i più pericolosi al mondo proprio per l’alta densità di popolazione che vive nelle zone esposte al pericolo: il Vesuvio e i Campi Flegrei. Anche in queste aree vulcaniche si hanno emissioni di gas endogeni e falde d’acqua ricche in CO2 e in caso di riattivazione del vulcano c’è da aspettarsi anche un forte incremento del rilascio del gas endogeno [Barberi et al., 2005]. Al fine di far conoscere tale problematica alla popolazione, si è ritenuto opportuno di agire sui ragazzi e di farlo in modo stimolante e divertente attraverso un Videogioco che catturi la loro attenzione in modo da portarli a scoprire le soluzioni più adeguate da adottare per individuare/evitare/gestire i pericoli legati a quello che spesso viene definito anche “carburante delle eruzioni”, i gas vulcanici. Le attività che hanno portato alla realizzazione di questo lavoro (e nello specifico del videogioco) sono state svolte nell’ambito del Progetto Europeo RESPIRE – Radon rEal time monitoring System and proactive Indoor Remediation (LIFE16ENV/IT/000553) e con la collaborazione di un Tirocinante del Dipartimento di Ingegneria dell’Informazione ed Elettrica e Matematica Applicata dell’Università degli Studi di Salerno. Il lavoro è stato descritto e sintetizzato in questo Report attraverso varie sezioni. La prima in cui si descrive la problematica dei Gas Vulcanici e della loro pericolosità; l’importanza e i vantaggi derivati dall’utilizzo di un videogioco come strumento di apprendimento; l’obiettivo che il videogioco si prefigge di raggiungere. Una seconda sezione in cui, in prima istanza, si evidenzia l’importanza di sviluppare un videogioco a partire da un Motore Grafico che consente di tralasciare i dettagli hardware e software di basso livello e di concentrarsi maggiormente sull’interattività e sulle regole del gioco, e in seconda istanza si descrivono le caratteristiche principali del motore grafico alla base del gioco (RPG Maker MV).Una terza sezione in cui viene presentato il videogioco sviluppato denominato “GioGas”; nello specifico, la sua trama, l’interfaccia grafica che lo caratterizza e alcuni sui dettagli implementativi. Infine, una sezione in cui vengono descritti gli sviluppi futuri come ad esempio la divulgazione presso le scuole e in occasione di eventi, l’implementazione di una versione multiplayer del gioco al fine di aggiungere ulteriori elementi di stimolo e di coinvolgimento per lo studente.
    Description: Published
    Description: 6SR VULCANI – Servizi e ricerca per la società
    Description: N/A or not JCR
    Keywords: edutainment ; pericolosità gas vulcanici ; video game ; volcanic gas hazard ; radon
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 36
    Publication Date: 2021-11-29
    Description: PGS1 is a new compact portable seismic station, designed at INGV OBS and Earth Lab, that is specifically intended for the deployment of dense arrays of seismographs on-shore. With its low cost, compact design, high data-quality and long battery life, PGS1 is a perfect solution for seismic monitoring networks. PGS1 design is based on a solid polypropylene suitcase, containing a complete data acquisition system, two battery packs and a photovoltaic panel. The new Earth Lab 5s medium-period seismic sensor is included. The whole system meets the IP67 standard requirements both in transport and in acquisition configuration. PGS1 is normally equipped with one battery pack, one more pack can be added inside the suitcase achieving 40 days of battery life. The station is equipped with a photovoltaic panel, useful to extend the deployment length. Inside the suitcase, there are compartments where to store the seismic sensor, the photovoltaic panel and all the cables. Therefore, the station is very easy to transport.
    Description: Published
    Description: SE105
    Description: 1IT. Reti di monitoraggio e sorveglianza
    Description: JCR Journal
    Keywords: Portable seismic station ; sesimic monitoring network ; PGS1 ; ETL3D/5s ; 05.04. Instrumentation and techniques of general interest
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 37
    Publication Date: 2021-12-14
    Description: Low field magnetic susceptibility and other rock magnetic analyses are applied to inspect the magnetic nature of solid residuals in snow samples collected in downtown Rome and in two Natural Parks in central Italy. Field emission scanning electron microscope and energy dispersive spectroscopy (FESEM-EDS) analyses are utilized to reveal the nature of Fe-rich particles and discriminate their anthropogenic origin. The results indicate that magnetite (Fe3O4) is the main magnetic carrier in almost all samples and that the variations in concentration are directly associated with local sources of particulate matter (PM) from anthropogenic pollution related to automotive circulation in both environments. Magnetic minerals of other provenance are found as accessories. The snow deposits revealed to be an efficient neutral tool for fine particle collections, also in environments characterized by different concentration and source of pollutants.
    Description: Published
    Description: GM215
    Description: 1A. Geomagnetismo e Paleomagnetismo
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 38
    Publication Date: 2021-12-15
    Description: The 1971 eruption represents a benchmark in the recent history of Etna volcano. From a volcanological point of view, this eruption was characterised by complex intrusive dynamics associated with significant ground deformation that induced the activation of the Moscarello seismogenic fault and the formation of a new summit crater: the Southeast Crater. At the same time, the 1971 event marks an important change in the eruptive style and composition of the magma towards products richer in K. It is no coincidence that, over the next fifty years, there would be an increase in the frequency of summit and flank eruptions and associated output rate. From an historical viewpoint, the eruptive event of 1971 was the first important flank eruption studied by the International Institute of Volcanology: the analysis of the scientific articles on this activity reveals a greater multidisciplinary content in the descriptions and explanations of volcanic activity. Particularly important were the collaborations of British and French research groups that, together with their Italian colleagues, succeeded in giving a complete picture of the eruption and describing the state of knowledge on the Sicilian volcano. The multidisciplinary methodology used to study this eruption is still valid today.
    Description: Published
    Description: VO543
    Description: 1V. Storia eruttiva
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 39
    Publication Date: 2021-12-15
    Description: This study analyses the relationship between the pre- and protohistoric sites on the slopes of Etna and the volcanic products, as well as the diverse settlement strategies in the different periods of prehistory. New C14 dating from significant excavations, in addition to those known from other Etnean sites, were performed with the aim of validating the chronology of the sequence of the different phases. A substantial concordance of the archaeological data with the volcanological ones has been found. It has been observed that a consistent human presence on Etna appears from the Middle Neolithic (5500 BC), after the sequence of eruptive events that marked the end of the Ellittico volcano (13550 - 13050 BC) and the formation of the Valle del Bove, and the subsequent debris and alluvial events on the eastern flanks of the volcano (7250 - 3350 BC). Human presence intensifies between the Late-Final Copper Age and the Early Bronze Age (2800 - 1450 BC), due to improvement in subsistence techniques and to the large presence of soils on lava flows suitable for sheep farming. The most recent phases of the Bronze Age are poorly represented, probably because of the concentration of the population in larger agglomerations (Montevergine and S. Paolillo at Catania, the Historical Hill at Paternò). The explosive eruptions taking place in this period seem to have had less impact on the settlement choices and have not affected the development of the sites over time.
    Description: Published
    Description: VO542
    Description: 1V. Storia eruttiva
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 40
    Publication Date: 2021-12-15
    Description: This special issue of Annals of Geophysics entitled: “When Volcanologists Meet Archaeologists and Other Disciplines: Relationships Between Eruptions and Human Communities” originates from a session (S13) of the Rittmann International Conference which took place in Catania on February 13th 2020, having as its main theme the history of volcanology and the impact of volcanic activity on humans. The twelve articles collected in this special issue reflect the aims and contents of the reports presented by some participants at this session of the Rittmann conference
    Description: Published
    Description: 6SR VULCANI – Servizi e ricerca per la società
    Description: JCR Journal
    Keywords: volcanologists ; archaeologists ; Eruptions ; Human Communities
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 41
    Publication Date: 2021-12-16
    Description: Published
    Description: 6TM. Poli Museali
    Keywords: Antonio Parascandola ; mineralogia
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: book
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  • 42
    Publication Date: 2021-12-22
    Description: The Western Ionian Sea is characterised by an active and diffuse seismicity, directly related to the convergence of the European and African Plates and by gravitational sinking and rollback of the oceanic lithosphere. In this area, the location of earthquakes is characterised by considerable uncertainties due to large azimuthal gaps, resulting in notable location errors. This problem was partially overcome with the use of data recorded by NEMO-SN1 seafloor observatory (October 2002 - February 2003; June 2012 - May 2013). We relocated 1130 crustal and sub-crustal earthquakes using land network and NEMO-SN1 data. As most events occurred on Mt. Etna, we focused on 358 earthquakes in the offshore area and near the coasts of Sicily and Calabria. The use of the combined land-marine networks has improved the earthquake locations in terms of azimuthal GAP, as well as in horizontal and vertical errors. The comparison between locations performed with and without NEMO-SN1 data shows that differences in latitude, longitude and depths are more evident in the Western Ionian Sea and in the coast of Sicily, where values of the differences over 5 km correspond to structural heterogeneities. The increased number of seismic stations deployed on land from 2003 to 2012 did not influence the location of events occurring offshore, where NEMO-SN1 continued to be the distinctive tool in the location process. Moreover, the new 73 focal mechanisms computed with P-wave polarities from NEMO-SN1 and land stations are in agreement with the regional structural model, showing a prevalent normal, normal/oblique, and strike-slip kinematics. The similarity of two new focal solutions with the mechanisms of the main shock and aftershock of the 1990 earthquake demonstrates that the seismic structures are still active and potentially dangerous. The P-wave travel time residual analysis confirms the activity along the main structural alignments. A single point of observation in the Ionian Sea can significantly improve the quality of locations, giving an opportunity to focus on the seismogenic structures responsible for the occurrence of medium-to-high magnitude earthquakes.
    Description: Published
    Description: Se655
    Description: 1T. Struttura della Terra
    Description: JCR Journal
    Keywords: Earthquake location ; Focal mechanisms ; Tectonic and volcanic structures ; NEMO-SN1 seafloor observatory ; Ionian Sea ; 04. Solid Earth ; 04.06. Seismology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 43
    Publication Date: 2021-12-22
    Description: The 8 September 1905 Calabria earthquake is the seismic event for which the Italian Seismic Catalogue shows the highest instrumental magnitude of the whole dataset. However, the reported MS = 7.47 was calculated over only two stations, and leaves room for a revision. In this work I provide a new estimate of the surface-wave magnitude of the earthquake calculated over sixteen individual values of magnitude from seven different stations. The new estimate is MS = 7.10 ± 0.21, a value that is consistently lined up with other estimates provided by means of macroseismic or geological evidence. The novel estimate is stable despite alternative epicentral locations and different depths proposed for this event by several investigators. The net variation of almost half a unit magnitude implies a resizing of the seismogenic source of the event in the frame of the seismotectonics of the region, and highlights the strong need for a systematic revision of the instrumental magnitude estimates for several ‘historical’ earthquakes that occurred at the dawning of the instrumental seismology.
    Description: Published
    Description: SE658
    Description: 4T. Sismicità dell'Italia
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 44
    Publication Date: 2021-12-22
    Description: Usually seismicity is intended as a natural phenomenon; yet the recording and interpretation of data are a human undertaking, historically conditioned. This research starts from the hypothesis that the decrease in Italian seismicity observed in the historical catalog [Rovida et al., 2021] for the central years of the twentieth century is due to the social and political conditioning that hindered its registration. This work, which focuses on the 1930s, with a brief excursion into previous years, presents part of the results obtained. In particular, the article deals with three earthquakes of which the data are substantially updated (Calabria, 7.03.1928; Alpi Noriche, 14.05.1930; Valli Giudicarie, 14.04.1931); then it presents an important replica of the strong Maiella earthquake, without macroseismic data in the catalog [Rovida et al., 2021], (Maiella, 23.11.1933); finally it considers a “forgotten” fifth earthquake (Southern Italy, 13.04.1938).
    Description: Published
    Description: 1-78
    Description: 4T. Sismicità dell'Italia
    Description: JCR Journal
    Keywords: Sismicità italiana; macrosismologia; Periodo Fascista ; Italian seismicity; Macroseismicity; Fascist period ; Italian seismicity in the 1930s of the 20th century.
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 45
    Publication Date: 2022-02-04
    Description: Le finalità del progetto sono quelle di realizzare un prototipo di ionosonda per sondaggi obliqui basato sul principio del radar ad onda continua modulata in frequenza, implementato tramite dispositivi programmabili innovativi che permettono di realizzare uno strumento più piccolo e trasportabile rispetto alle ionosonde classiche. La ionosonda SDR è un radar bistatico costituito da un trasmettitore, che può servire contemporaneamente diversi ricevitori situati in località differenti, e da uno o più ricevitori che possono sintonizzarsi su differenti trasmettitori che effettuano sondaggi ad orari differenti. I sondaggi obliqui permettono di mappare la ionosfera in varie parti del territorio per la verifica di modelli teorici della ionosfera e per studiare la possibilità di usare le variazioni locali del Contenuto Elettronico Totale (TEC) come segnale di possibili precursori di terremoti.
    Description: Published
    Description: 1-32
    Description: 6IT. Osservatori non satellitari
    Description: N/A or not JCR
    Keywords: ionosonda ; radar FM-CW ; software defined radio ; 01.02. Ionosphere
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 46
    Publication Date: 2021-11-25
    Description: The Istituto Nazionale di Geofisica e Vulcanologia (INGV) was born from the unification of public research institutions in the field of geophysics and volcanology. In the first twenty years from the foundation law of 1999, the INGV has seen a remarkable development, alternating moments of expansion, with significant increases in funding and number of employees, with long periods of stagnation. During these years the number of people hired with fixed-term contracts has grown, also to meet the needs of seismic and volcanic monitoring of the Italian territory, carried out on the basis of agreements with the Department of Civil Protection. After twenty years, it's time to outline a picture of the present situation and the evolutionary process that determined it. With this objective, the following analysis of the evolution of INGV was carried out in the period between its establishment and 2019, with reference to aspects such as the composition of the personnel, its distribution in the Sections, age, gender, role, career, with the aim of providing a tool for evaluating the progress made and planning future developments. The presence of a large number of precarious workers, distributed unevenly in territorial offices, for many years represented the main problem of the INGV, but not the only one. The contraction of the funding and the hiring freeze also slowed the development of the careers of researchers and other employers. The poor gender balance among the personnel, in particular among researchers, and the high average age represents further critical elements. The appropriate rebalancing of heterogeneities, aimed at maximum functionality and effective growth of the institute, should be the challenge for the next years. The future of INGV will depend on the choices that will be made today and the knowledge of the evolution of the institution until today is an essential element for proper programming.
    Description: Published
    Description: 1-92
    Description: 3TM. Comunicazione
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 47
    Publication Date: 2021-12-14
    Description: Istituto Nazionale di Geofisica e Vulcanologia
    Description: Published
    Description: 1-186
    Description: 1SR TERREMOTI - Sorveglianza Sismica e Allerta Tsunami
    Description: 1IT. Reti di monitoraggio e sorveglianza
    Description: 1TM. Formazione
    Description: 2TM. Divulgazione Scientifica
    Description: N/A or not JCR
    Keywords: Progetto Sale Operative Integrate e Reti di monitoraggio futuro (S.O.I.R.) ; Rete di monitoraggio multiparametrico ; Nuovi Dati e Modelli per le Sale ; Multiparametric Monitoring Network ; Project Integrated Control Rooms and Future monitoring networks (S.O.I.R.) ; New Data and Models for the Control Room
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 48
    Publication Date: 2021-12-01
    Description: This contribution illustrates the state of the art on the development of the multiparametric network in Sicily in the last three years. This region is wellknown for the strong earthquakes (M〉6.5) which struck in historic time. However, the coverage of the seismic network developed in the last decades was not fully optimized to the need of the seismic surveillance. Since 2017, the group belonging to the National Earthquake Observatory (ONT) which operates in Sicily launched a developing plan of the preexisting seismic network in the framework of the project FISR “Sale Operative Integrate e Reti di Monitoraggio del futuro: l’INGV 2.0 (S.O.I.R.)”. Such update will end by the next years thanks to the project “GRINT Italian Research Infrastructure for Geosciences” in the framework of the “Programma Operativo Nazionale” (PON) of the Italian Ministry for the University and Research. This plan envisages both the upgrade of monitoring systems in the already existing nodes, and the integration of new nodes. The main objective is to build a multiparametric network which integrates the main seismic network, with the monitoring of other geophysical signals through the implementation of other sensors: accelerometers, geodetic GPS, radon detectors, and corner reflectors. We also illustrate the plan for the realization of a redundant network which could support the tasks of the main infrastructure in case of failure of the latter. Finally, we present some experimental urbanscale networks which in the future could support the main infrastructure.
    Description: Published
    Description: 1-40
    Description: 1IT. Reti di monitoraggio e sorveglianza
    Description: JCR Journal
    Keywords: Rete Sismica Nazionale ; Rete multiparametrica ; Sicilia ; National Seismic Network ; Multiparametric network; ; Sicily
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 49
    Publication Date: 2021-12-24
    Description: This article has been accepted for publication in Geophysical Journal International ©: The Authors 2021. Published by Oxford University Press on behalf of the Royal Astronomical Society. All rights reserved. Uploaded in accordance with the publisher's self-archiving policy.
    Description: Ambient-noise records from the AlpArray network are used to measure Rayleigh wave phase velocities between more than 150,000 station pairs. From these, azimuthally anisotropic phase-velocity maps are obtained by applying the Eikonal tomography method. Several synthetic tests are shown to study the bias in the Ψ2 anisotropy. There are two main groups of bias, the first one caused by interference between refracted/reflected waves and the appearance of secondary wavefronts that affect the phase travel-time measurements. This bias can be reduced if the amplitude field can be estimated correctly. Another source of error is related to the incomplete reconstruction of the travel-time field that is only sparsely sampled due to the receiver locations. Both types of bias scale with the magnitude of the velocity heterogeneities. Most affected by the spurious Ψ2 anisotropy are areas inside and at the border of low-velocity zones. In the isotropic velocity distribution, most of the bias cancels out if the azimuthal coverage is good. Despite the lack of resolution in many parts of the surveyed area, we identify a number of anisotropic structures that are robust: in the central Alps, we find a layered anisotropic structure, arc-parallel at midcrustal depths and arc-perpendicular in the lower crust. In contrast, in the eastern Alps, the pattern is more consistently E-W oriented which we relate to the eastward extrusion. The northern Alpine forleand exhibits a preferential anisotropic orientation that is similar to SKS observations in the lowermost crust and uppermost mantle.
    Description: German Science Foundation (SPP-2017, Project Ha 2403/21-1); Swiss National Science Foundation SINERGIA Project CRSII2-154434/1 (Swiss-AlpArray); Progetto Pianeta Dinamico, finanziamento MUR-INGV, Task S2 – 2021
    Description: Published
    Description: 151–170
    Description: 1T. Struttura della Terra
    Description: JCR Journal
    Keywords: Seismic anisotropy ; Seismic interferometry ; Seismic tomography ; Wave propagation ; Continental tectonics: compressional ; 04.01. Earth Interior ; 04.06. Seismology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 50
    Publication Date: 2021-12-13
    Description: The present paper describes the process of moving from a research study of most common vulnerable non-structural elements, to deliver solutions, tools and guidelines to improve understanding of and responsiveness to community concerns about seismic risk and non-structural elements. The observed damage to non-structural elements following recent earthquakes in Italy, Portugal and Iceland, were used for designing communication tools under the KnowRISK EU project for multi-stakeholders (students, business and citizens): the Practical Guide, the Students Short Guide, the KnowRISK Portfolio of Solutions, the Move, Protect and Secure video, the augmented reality apps, the maquettes, the students notebooks, videos, board games and hands-on tools. The philosophy behind these deliverables is that some risks, once identified, can be eliminated or reduced by informing people and suggesting preventive or emergency measures. These tools are devoted to improving the seismic performance of non-structural elements and to reduce the associated economic losses, loss of functionality, and potential threats to life safety. The rationale behind the selection of the information that people need to know for converting knowledge to more safety is discussed and a description of the transference of the findings of research to communication solutions is presented. The tools were planned following the engagement-model in risk communication to ensure that needs of communities and selected stakeholders were acknowledged, and that recipients are addressed in a way that appeals to them. Different media and communication channels such as print, television, online, face-to face communication and interviews were used for risk communication.
    Description: This study was co-financed by the European Commission’s Humanitarian Aid and Civil Protection (Grant agreement ECHO/SUB/2015/718655/PREV28).
    Description: Published
    Description: SE322
    Description: 5T. Sismologia, geofisica e geologia per l'ingegneria sismica
    Description: JCR Journal
    Keywords: Seismic risk ; seismic damage ; non-structural damage ; preventative measures ; risk awareness ; 04.06. Seismology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 51
    Publication Date: 2021-12-15
    Description: This article has been accepted for publication in Geophysical Journal International ©: The Authors 2022. Published by Oxford University Press on behalf of the Royal Astronomical Society. All rights reserved. Uploaded in accordance with the publisher's self-archiving policy.
    Description: To understand the seismotectonics and the seismic hazard of the study sector of the Northern Apennines (Italy), one of the most important earthquakes of magnitude Mw = 6.5 which struck the Lunigiana and Garfagnana areas (Tuscany) on 7 September 1920 should be studied. Given the early instrumental epoch of the event, neither geometric and kinematic information on the fault-source nor its fault-plane solution were available. Both areas were candidates for hosting the source fault and there was uncertainty between a normal fault with Apenninic direction or an anti-Apenninic strike-slip. We retrieved 11 focal parameters (including the fault-plane solution) of the 1920 earthquake. Only macroseismic intensity information (from 499 inhabited centres) through the KF-NGA inversion technique was used. This technique uses a Kinematic model of the earthquake source and speeds up the calculation by a Genetic Algorithm with Niching. The result is a pure dip-slip focal solution. The intrinsic ambiguities of the KF-NGA method (±180° on the rake angle; choice of the fault plane between the two nodal planes) were solved with field and seismotectonic evidence. The earthquake was generated by a normal fault (rake angle = 265° ± 8°) with an Apennine direction (114° ± 5°) and dipping 38° ± 6° towards SW. The likely candidate for hosting the source-fault in 1920 is the Compione-Comano fault that borders the NE edge of the Lunigiana graben. The KF-NGA algorithm proved to be invaluable for studying the kinematics of early instrumental earthquakes and allowed us to uniquely individuate, for the first time ever, the seismogenic source of the 1920 earthquake. Our findings have implications in hazard computation and seismotectonic contexts.
    Description: Published
    Description: 1465–1477
    Description: 4T. Sismicità dell'Italia
    Description: JCR Journal
    Keywords: Inverse theory ; Body waves ; Earthquake source observations ; Seismicity and tectonics ; Dynamics: seismotectonics ; Fractures, faults, and high strain deformation zones ; 04.06. Seismology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 52
    Publication Date: 2021-12-23
    Description: The lava platform and the three pyroclastic cones of Vulcanello constitute the northernmostvolcanic structure of the island of Vulcano (Aeolian Islands). The sandy isthmus connecting theplatform to the main island was definitively formed in the first half of the 1500s; before then,Vulcano and Vulcanello were two close but separate islands. For a long time, the interpretation ofthe sources of the II-I century BC, had considered the islet as built up about 2200 years ago. Thisbelief, which proliferated among naturalists from the 17th century, is not confirmed in the ancienttexts or even in the geographical documents of the time, which do not indicate the presence ofVulcanello as a new and stable island near Vulcano. The islet would only be mentioned at the dawnof the second millennium, and named in Arabic “Gabal’ al Burkān”, meaning Mount of Vulcano;shortly thereafter the toponym changed to the Latin “Insulam Vulcanelli” and then, towards the15th century, finally to Vulcanello.Since the creation of a volcanic island certainly occurred in the Aeolian Islands in the classical era,but traces of it were quickly lost, the most plausible hypothesis is that it was formed in the area ofthe current Vulcanello, to be subsequently erased by the sea. The shallow, flat seabed, likelyremaining as a result of sea abrasion, might have represented the morphological element on whichthe circular lava platform we know today was formed sometime between 950 and 1000 AD.
    Description: Published
    Description: VO548
    Description: 1V. Storia eruttiva
    Description: JCR Journal
    Keywords: Volcanic risk; Volcanic eruptions; General or miscellaneous.
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 53
    Publication Date: 2022-01-14
    Description: On November 20, 2019, an exercise was held at the National Institute of Geophysics and Volcanology (INGV) as part of the activities planned for preparing for seismic emergencies. The training was "tabletop" with the simulation of an earthquake with a magnitude greater than the threshold required for the activation of the intervention procedures, described in the "Protocol of the Authority for the management of seismic and tsunami emergencies and Establishment of the Crisis Unit”, the flow of actions that follow was verified. The exercise involved the entire INGV even if the Rome headquarters was the most involved, and it was the second of this type after that carried out in 2015 [Pondrelli et al., 2016]. Main motivation of this training was the analysis of the efficiency of the Organization Protocol, a document that for the first time at INGV codifies the actions of the Crisis Unit and of the Institute in general on the occurrence of seismic events and / or seismic sequences and / or tsunamis. The Protocol has been formalized on the basis of the numerous experiences that the Institute has supported over many years, to honour its vocation in the monitoring and seismic surveillance of the national territory [Margheriti et al., 2021].
    Description: Published
    Description: 1-50
    Description: 2SR TERREMOTI - Gestione delle emergenze sismiche e da maremoto
    Description: N/A or not JCR
    Keywords: Esercitazione ; Emergenza ; Protocollo di Ente ; Rischio Sismico ; Operating protocol ; Emergency ; Exercise ; Seismic risk ; 05.09. Miscellaneous
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 54
    Publication Date: 2021-12-22
    Description: Systematic variations in the crystal cargo and whole-rock isotopic compositions of mantle-derived basalts in the intraplate Dunedin Volcano (New Zealand) indicate the influence of a complex mantle-to-crust polybaric plumbing system. Basaltic rocks define a compositional spectrum from low-alkali basalts through mid-alkali basalts to high-alkali basalts. High-alkali basalts display clinopyroxene crystals with sector (hourglass) and oscillatory zoning (Mg#61–82) as well as Fe-rich green cores (Mg#43–69), whereas low-alkali basalts are characterized by clinopyroxenes with unzoned overgrowths (Mg#69–83) on resorbed mafic cores (Mg#78–88), coexisting with reversely zoned plagioclase crystals (An43–68 to An60–84 from core to rim). Complex magma dynamics are indicated by distinctive compositional variations in clinopyroxene phenocrysts, with Cr-rich zones (Mg#74–87) indicating continuous recharge by more mafic magmas. Crystallization of olivine, clinopyroxene and titanomagnetite occurred within a polybaric plumbing system extending from upper mantle to mid-crustal depths (485–1059 MPa and 1147–1286°C), whereas crystallization of plagioclase with subordinate clinopyroxene and titanomagnetite proceeded towards shallower crustal levels. The compositions of high-alkali basalts and mid-alkali basalts resemble those of ocean island basalts and are characterized by FOZO-HIMU isotopic signatures (87Sr/86Sri = 0.70277–0.70315, 143Nd/144Ndi = 0.51286–0.51294 and 206Pb/204Pb = 19.348–20.265), whereas low-alkali basalts have lower incompatible element abundances and isotopic compositions trending towards EMII (87Sr/86Sri = 0.70327–70397, 143Nd/144Ndi = 0.51282–0.51286 and 206Pb/204Pb = 19.278–19.793). High- and mid-alkali basalt magmas mostly crystallized in the lower crust, whereas low-alkali basalt magma recorded deeper upper mantle clinopyroxene crystallization before eruption. The variable alkaline character and isotope composition may result from interaction of low-alkaline melts derived from the asthenosphere with melts derived from lithospheric mantle, possibly initiated by asthenospheric melt percolation. The transition to more alkaline compositions was induced by variable degrees of melting of metasomatic lithologies in the lithospheric mantle, leading to eruption of predominantly small-volume, high-alkali magmas at the periphery of the volcano. Moreover, the lithosphere imposed a filtering effect on the alkalinity of these intraplate magmas. As a consequence, the eruption of low-alkali basalts with greater asthenospheric input was concentrated at the centre of the volcano, where the plumbing system was more developed.
    Description: Published
    Description: egab062
    Description: 2V. Struttura e sistema di alimentazione dei vulcani
    Description: 3V. Proprietà chimico-fisiche dei magmi e dei prodotti vulcanici
    Description: 4V. Processi pre-eruttivi
    Description: JCR Journal
    Keywords: alkali basalts ; Dunedin Volcano ; thermobarometry ; primary magma ; lithospheric mantle filter ; Igneous Petrology ; Thermobarometry ; Mantle melting and metasomatism ; Magmatic plumbing systems
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 55
    Publication Date: 2021-12-23
    Description: Il mondo della Ricerca e dell ’Innovazione Tecnologica per sua natura è sempre in evoluzione, ed accompagnato da normative in materia di Sicurezza e Salute non sempre conosciute o applicate. La particolare enfasi data alla formazione nel quadro normativo riguardante la Sicurezza e Salute nei luoghi di lavoro, sia a livello nazionale che comunitario, dimostra e determina l’importanza attribuita a tale processo, non solo come mezzo elettivo per la diffusione della cultura della Sicurezza a tutti i livelli , ma anche, e soprattutto, come misura generale di tutela.
    Description: Istituto Nazionale di Geofisica e Vulcanologia
    Description: Published
    Description: 1-54
    Description: 1TM. Formazione
    Description: N/A or not JCR
    Keywords: Formazione sicurezza e salute ; Sicurezza e Salute lavoro
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 56
    Publication Date: 2021-11-25
    Description: Within a fault governing model the characteristic scale length is one of the most relevant physical parameters because it accounts for the so–called fracture energy (density) of the system, its dynamics, the time during which the accumulated stress is released and the seismic waves are excited, the amount of slip developed during an instability event. Friction laboratory experiments reveal that it is not a material property, but that it changes with the sliding velocity. We propose two rather different analytical models to fit laboratory evidence and we incorporate them into a fault model able to simulate repeated earthquakes in the framework of various formulations of rate and state friction. We demonstrate that temporal variations of the scale length do not prevent the system to reach its limit cycle, but they systematically reduce the magnitude of the expected event (both in term of developed slip, and thus seismic moment, and released stress) and also reduce the inter–event time (recurrence interval). Depending on the friction model, the system can penetrate into the stable regime and can either continue the accelerating phase toward to failure or decelerate and abort instability.
    Description: Published
    Description: SE217
    Description: 3T. Fisica dei terremoti e Sorgente Sismica
    Description: JCR Journal
    Keywords: Earthquake dynamics ; Characteristich length ; Dynamic models
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 57
    Publication Date: 2021-11-26
    Description: The understanding of the ancient Earth’s Magnetic Field strength, or absolute paleointensity, is fundamental for several disciplines of Earth Sciences. Following the growing interest in this field in the last decades, the number of paleointensity studies has been increasing and the Paleomagnetic Laboratory of the Istituto Nazionale di Geofisica e Vulcanologia (INGV) in Rome, Italy expanded the instrument park with a ASC TD48SC oven for paleomagnetic and paleointensity measurements. This manual represents an updated version of the original manual “Guida all’uso del forno ASC TD48SC per la stima della paleointensità assoluta con il metodo ThellierThellier modificato” [Di Chiara, 2014]. The aim is to provide a practical guide for paleointensity measurements, using the IZZIThellier experiment and the software Thellier_GUI for the processing of the geomagnetic field strength or paleointensity data.
    Description: INGV
    Description: Published
    Description: 1-20
    Description: 1A. Geomagnetismo e Paleomagnetismo
    Description: N/A or not JCR
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  • 58
    Publication Date: 2021-11-25
    Description: We describe the geochemical characteristics of groundwater samples collected in 23 water wells located on the northern margin of the Hyblean plateau (East Sicily). This area, mostly made of highly permeable carbonate rocks, is rich in low temperature (T 〈 50° C) hydrothermal groundwaters, distributed in an active sismogenetic zone, with several ENE-WSW-directed tectonic structures that drove magma to the surface during Upper Pliocene and Pleistocene. The chemical features suggest complex mixing between rainwater, CO2-rich groundwater, steam-heated groundwater and geothermal brines, as highlighted by Principal Component Analysis (PCA). Some parameters, however, indicate widespread pollution of the aquifers from human activities. Stable isotopes analysis confirms the meteoric origin of groundwater and supports the origin of dissolved CO2 mostly from mantle degassing through deep tectonic faults. Geothermometric estimates, mostly based on quartz and Saturation Indexes geothermometers, suggest minimum reservoir temperature between 100 and 120° C.
    Description: Published
    Description: HS438
    Description: 1TR. Georisorse
    Description: JCR Journal
    Keywords: Hydrothermal systems ; Hyblean plateau ; Water geochemistry ; Stable isotopes ; Principal Component Analysis ; Geothermometry
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 59
    Publication Date: 2021-11-30
    Description: A ground magnetic study was performed on the northern upper flank of Mt. Etna to provide new insights into subsurface volcano-tectonic structures. The high resolution magnetic survey was focused on the main structures of Piano delle Concazze, a large flat area dominated by the North- East crater and bounded by the rim of the Valle del Leone depression and the extremity of the North-East Rift. More than 2,500 measurements were gathered with a sampling step of about 3 m covering an area of about 0.2 km2. The total-intensity anomaly field shows the presence of intense South-North aligned maxima related to shallow geological structures affecting this area. Filtering techniques and 2.5D modeling have been applied for the determination of the magnetic source parameters. In order to distinguish the near surface structure, filters of the vertical derivatives, Butterworth high-pass and the tilt derivative were used. The 3D Euler deconvolution has been applied to estimate the depth and the structural indices of the causative sources. The calculated structural indices, that express the geometrical nature of the source, are in agreement with forward modeling. They show that the area is mainly affected by subvertical normal fault and the estimated depth of magnetic sources ranges between 10 m and 40 m. Our total field magnetic survey shows that characteristic magnetic anomalies are related to fault zones in the Piano delle Concazze that are well consistent with the local tectonics. The subsurface structures that have been detected allowed to delineate the general structural framework of the area. In particular, it was possible to clarify that these structures seem to be not deep rooted and consequently they can hardly act as preferential pathways for magma ascent.
    Description: Published
    Description: PE108
    Description: 2V. Struttura e sistema di alimentazione dei vulcani
    Description: JCR Journal
    Keywords: Filtering technique; ; 3D Euler deconvolution. ; Mt Etna ; 2.5D modelling; ; Magnetic survey on Etna
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 60
    Publication Date: 2021-11-25
    Description: The traction evolution is a fundamental ingredient to model the dynamics of an earthquake rupture which ultimately controls, during the coseismic phase, the energy release, the stress redistribution and the consequent excitation of seismic waves. In the present paper we explore the use of the friction behavior derived from laboratory shear experiments performed on granular materials at low normal stress. We find that the rheological properties emerging from these laboratory experiments can not be described in terms of preexisting governing models already presented in literature; our results indicate that neither rate–and state–dependent friction laws nor nonlinear slip–dependent models, commonly adopted for modeling earthquake ruptures, are able to capture all the features of the experimental data. Then, by exploiting a novel numerical approach, we directly incorporate the laboratory data into a code to simulate the fully dynamic propagation of a 3–D slip failure. We demonstrate that the rheology of the granular material, imposed as fault boundary condition, is dynamically consistent. Indeed, it is able to reproduce the basic features of a crustal earthquake, spontaneously accelerating up to some terminal rupture speed, both sub– and supershear.
    Description: Published
    Description: SE441
    Description: 3T. Fisica dei terremoti e Sorgente Sismica
    Description: JCR Journal
    Keywords: Fault rheology ; Granular materials ; Frictional experiments
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  • 61
    Publication Date: 2021-11-26
    Description: INGV
    Description: Published
    Description: 1-18
    Description: 1A. Geomagnetismo e Paleomagnetismo
    Description: N/A or not JCR
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  • 62
    Publication Date: 2021-12-14
    Description: In the last decade, bottom-up strategies of risk education have raised importance, making seriousgames to become an alternative or complementary teaching tool for enhancing skills for acollaborative and adaptive response to social-ecological challenges. This study describes issues and challenges of serious games implemented within the framework oftwo European projects, namely UPStrat-MAFA (Urban Disaster Prevention Strategies usingMacroseismic Fields and FAult sources) and KnowRISK (Know your city, Reduce seISmic risKthrough non-structural elements); the goal is to instil in young people a proactive attitude towardsthe mitigation of seismic risk. The games were tested in some dissemination events focussed on fostering seismic riskpreparedness in students and improving good practices. We discuss the performance of our gameseven against more standard approaches to risk education. Our experience shows a rise of students’engagement compared to standard learning activities. The games were effective as students wereable to grasp the most relevant actions to reduce risk
    Description: Published
    Description: SE327
    Description: 2TM. Divulgazione Scientifica
    Description: JCR Journal
    Keywords: Serious games ; Seismic risk mitigation ; Prevention ; Botton up approach ; Education ; 05.03. Educational, History of Science, Public Issues
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  • 63
    Publication Date: 2021-12-23
    Description: A first combined absolute gravity and GNSS network of 5 stations distributed between Lazio, Umbria and Abruzzo regions, was realized in 2018 in order to lay the basics for a multidisciplinary approach to natural risk assessment in the area of Central Italy, affected by the 2009 and 2016 seismic activity. Up to now, two absolute gravity campaigns were carried out using the transportable Microg LaCoste FG5#238 and the portable A10#39 absolute gravimeters. The locations of gravimetric sites have been chosen indoor to allow optimal condition of measure; therefore, the heights of the indoor sites have been determined by joining the outdoor GNSS with classical topographic surveys. The good results obtained after the campaigns and data processing lay the foundations for a new multidisciplinary approach to study also seismogenetic areas. In this paper, we present the gravity and GNSS station monographs, together with the absolute gravity values and the coordinates resulting from the first field surveys.
    Description: Published
    Description: 1-26
    Description: 4T. Sismicità dell'Italia
    Description: JCR Journal
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  • 64
    Publication Date: 2021-12-23
    Description: Volcanic activity resumed during early Middle Ages times at Lipari following at least 6000 years of quiescence. This phenomenon occurred in a social context that had continuously developed from prehistoric times to the Roman age and was burdened by a demographic crisis that involved the archipelago between the 6th and 11th century AD. The rare archaeological records relating to the 6th - 11th centuries suggest abrupt changes in the population of the islands. The medieval sources are rich in religious and fantastic references to volcanic events linked to Lipari and Vulcano, testifying the uneasy condition for the human communities. This work concerns the resilience and adaptation of the communities to volcanic activity during the Late Middle Ages in Lipari. Starting from 1083 the Aeolian archipelago was involved in a repopulation program, implemented in 1095 by the Constitutum and organized by the Benedictine Monastery with the annexed S. Bartolomeo Cathedral on the castle. From the 13th century the volcanic phenomena, strictly limited to the northern sector of the island, did not interfere as previously with the anthropic activities. The Monastery will be enlarged in the Norman phase during the first half of the 12th century with the construction of the cloister. New historical documents relating to the 1264, report news of fires and land movements on Lipari. Recent age determinations obtained for the obsidian flow of Rocche Rosse at 1220 ± 30 AD (archaeomagnetic dating) and for an obsidian block of the Lami pyroclastic cone at 1243 ± 190 (fission-track dating) allow to define the age of the last phase of activity of the Monte Pilato-Lami-Rocche Rosse complex, and to associate it the events reported on 1264’s historical documents. This work makes in comparison volcanological, archaeological and historical dates and described an updated summary of one of the lesser known phases of the history of the archipelago. The main consequence of the medieval volcanic activity at Lipari caused a clear division of the territory with the population confined in the southeast quadrant, protected to the north by Serra and Monte Rosa which represented a natural orographic barrier.
    Description: Published
    Description: VO549
    Description: 1V. Storia eruttiva
    Description: JCR Journal
    Keywords: Aeolian Island; Middle Ages; Lipari; Volcano activity.
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 65
    Publication Date: 2022-10-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Johnson, W. M., Alexander, H., Bier, R. L., Miller, D. R., Muscarella, M. E., Pitz, K. J., & Smith, H. Auxotrophic interactions: A stabilizing attribute of aquatic microbial communities? FEMS Microbiology Ecology, (2020): fiaa115, doi: 10.1093/femsec/fiaa115.
    Description: Auxotrophy, or an organism's requirement for an exogenous source of an organic molecule, is widespread throughout species and ecosystems. Auxotrophy can result in obligate interactions between organisms, influencing ecosystem structure and community composition. We explore how auxotrophy-induced interactions between aquatic microorganisms affect microbial community structure and stability. While some studies have documented auxotrophy in aquatic microorganisms, these studies are not widespread, and we therefore do not know the full extent of auxotrophic interactions in aquatic environments. Current theoretical and experimental work suggests that auxotrophy links microbial community members through a complex web of metabolic dependencies. We discuss the proposed ways in which auxotrophy may enhance or undermine the stability of aquatic microbial communities, highlighting areas where our limited understanding of these interactions prevents us from being able to predict the ecological implications of auxotrophy. Finally, we examine an example of auxotrophy in harmful algal blooms to place this often theoretical discussion in a field context where auxotrophy may have implications for the development and robustness of algal bloom communities. We seek to draw attention to the relationship between auxotrophy and community stability in an effort to encourage further field and theoretical work that explores the underlying principles of microbial interactions.
    Description: This work was supported by the National Science Foundation [OCE-1356192].
    Keywords: Auxotrophy ; Microbial community stability ; Microbial interactions ; Aquatic
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  • 66
    Publication Date: 2022-10-26
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Keller, A. G., Apprill, A., Lebaron, P., Robbins, J., Romano, T. A., Overton, E., Rong, Y., Yuan, R., Pollara, S., & Whalen, K. E. Characterizing the culturable surface microbiomes of diverse marine animals. FEMS Microbiology Ecology, 97(4), (2021): fiab040, https://doi.org/10.1093/femsec/fiab040.
    Description: Biofilm-forming bacteria have the potential to contribute to the health, physiology, behavior and ecology of the host and serve as its first line of defense against adverse conditions in the environment. While metabarcoding and metagenomic information furthers our understanding of microbiome composition, fewer studies use cultured samples to study the diverse interactions among the host and its microbiome, as cultured representatives are often lacking. This study examines the surface microbiomes cultured from three shallow-water coral species and two whale species. These unique marine animals place strong selective pressures on their microbial symbionts and contain members under similar environmental and anthropogenic stress. We developed an intense cultivation procedure, utilizing a suite of culture conditions targeting a rich assortment of biofilm-forming microorganisms. We identified 592 microbial isolates contained within 15 bacterial orders representing 50 bacterial genera, and two fungal species. Culturable bacteria from coral and whale samples paralleled taxonomic groups identified in culture-independent surveys, including 29% of all bacterial genera identified in the Megaptera novaeangliae skin microbiome through culture-independent methods. This microbial repository provides raw material and biological input for more nuanced studies which can explore how members of the microbiome both shape their micro-niche and impact host fitness.
    Description: Funding was provided by the National Science Foundation (Biological Oceanography) award #1657808 and National Institutes of Health grants 1R21-AI119311–01 to K. E. Whalen, as well as funding from the Koshland Integrated Natural Science Center and Green Fund at Haverford College. This constitutes scientific manuscript #298 from the Sea Research Foundation.
    Keywords: Bacteria ; SSU rRNA ; Coral ; Whale ; Microbiome ; Skin
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  • 67
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Wang, P., Huang, C., Lin, J., Jian, Z., Sun, Z., & Zhao, M. The South China Sea is not a mini-Atlantic: plate-edge rifting vs intra-plate rifting. National Science Review, 6(5), (2019): 902-913, doi:10.1093/nsr/nwz135.
    Description: The South China Sea, as ‘a non-volcanic passive margin basin’ in the Pacific, has often been considered as a small-scale analogue of the Atlantic. The recent ocean drilling in the northern South China Sea margin found, however, that the Iberian model of non-volcanic rifted margin from the Atlantic does not apply to the South China Sea. In this paper, we review a variety of rifted basins and propose to discriminate two types of rifting basins: plate-edge type such as the South China Sea and intra-plate type like the Atlantic. They not only differ from each other in structure, formation process, lifespan and geographic size, but also occur at different stages of the Wilson cycle. The intra-plate rifting occurred in the Mesozoic and gave rise to large oceans, whereas the plate-edge rifting took place mainly in the mid-Cenozoic, with three-quarters of the basins concentrated in the Western Pacific. As a member of the Western Pacific system of marginal seas, the South China Sea should be studied not in isolation on its origin and evolution, but in a systematic context to include also its neighboring counterparts.
    Description: This work was supported by the National Natural Science Foundation of China as a part of the ‘South China Sea Deep’ Project (91128000).
    Keywords: Rifting ; Marginal basin ; Passive margin ; South China Sea ; Western Pacific ; Subduction
    Repository Name: Woods Hole Open Access Server
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  • 68
    Publication Date: 2022-10-26
    Description: Author Posting. © The Author(s), 2020. This is the author's version of the work. It is posted here by permission of Nature Research for personal use, not for redistribution. The definitive version was published in Bramante, J. F., Ford, M. R., Kench, P. S., Ashton, A. D., Toomey, M. R., Sullivan, R. M., Karnauskas, K. B., Ummenhofer, C. C., & Donnelly, J. P. (2020). Increased typhoon activity in the Pacific deep tropics driven by Little Ice Age circulation changes. Nature Geoscience, 13, 806–811. doi:10.1038/s41561-020-00656-2.
    Description: The instrumental record reveals that tropical cyclone activity is sensitive to oceanic and atmospheric variability on inter-annual and decadal scales. However, our understanding of the influence of climate on tropical cyclone behaviour is restricted by the short historical record and the sparseness of prehistorical reconstructions, particularly in the western North Pacific, where coastal communities suffer loss of life and livelihood from typhoons annually. Here, to explore past regional typhoon dynamics, we reconstruct three millennia of deep tropical North Pacific cyclogenesis. Combined with existing records, our reconstruction demonstrates that low-baseline typhoon activity prior to 1350 ce was followed by an interval of frequent storms during the Little Ice Age. This pattern, concurrent with hydroclimate proxy variability, suggests a centennial-scale link between Pacific hydroclimate and tropical cyclone climatology. An ensemble of global climate models demonstrates a migration of the Pacific Walker circulation and variability in two Pacific climate modes during the Little Ice Age, which probably contributed to enhanced tropical cyclone activity in the tropical western North Pacific. In the next century, projected changes to the Pacific Walker circulation and expansion of the tropics will invert these Little Ice Age hydroclimate trends, potentially reducing typhoon activity in the deep tropical Pacific.
    Description: This work was supported by the Strategic Environmental Research and Development Program (SERDP RC-2336). C.C.U. acknowledges support from NSF under AGS-1602455. We thank student intern D. Carter for extensive labwork on core LTD3. We acknowledge the WCRP’s Working Group on Coupled Modelling, which is responsible for CMIP, and we thank the climate modelling groups for producing and making available their model output. CMIP5 model output was provided by the WHOI CMIP5 Community Storage Server via their website: http://cmip5.whoi.edu/. Any use of trade, firm or product names is for descriptive purposes only and does not imply endorsement by the US Government.
    Description: 2021-05-16
    Keywords: Tropical cyclones ; Little Ice Age ; Last millennium ; Paleoclimate
    Repository Name: Woods Hole Open Access Server
    Type: Preprint
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  • 69
    Publication Date: 2022-09-19
    Description: Probabilistic volcanic hazard assessment is a standard methodology based on running a deterministic hazard quantification tool multiple times to explore the full range of uncertainty in the input parameters and boundary conditions, in order to probabilistically quantify the variability of outputs accounting for such uncertainties. Nowadays, different volcanic hazards are quantified by means of this approach. Among these, volcanic gas emission is particularly relevant given the threat posed to human health if concentrations and exposure times exceed certain thresholds. There are different types of gas emissions but two main scenarios can be recognized: hot buoyant gas emissions from fumaroles and the ground and dense gas emissions feeding density currents that can occur, e.g., in limnic eruptions. Simulation tools are available to model the evolution of critical gas concentrations over an area of interest. Moreover, in order to perform probabilistic hazard assessments of volcanic gases, simulations should account for the natural variability associated to aspects such as seasonal and daily wind conditions, localized or diffuse source locations, and gas fluxes. Here we present VIGIL (automatized probabilistic VolcanIc Gas dIspersion modeLling), a new Python tool designed for managing the entire simulation workflow involved in single and probabilistic applications of gas dispersion modelling. VIGIL is able to manage the whole process from meteorological data processing, needed to run gas dispersion in both the dilute and dense gas flow scenarios, to the post processing of models’ outputs. Two application examples are presented to show some of the modelling capabilities offered by VIGIL.
    Description: Published
    Description: DM107
    Description: 6V. Pericolosità vulcanica e contributi alla stima del rischio
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 70
    Publication Date: 2022-10-28
    Description: Relative relocation methods are commonly used to precisely relocate earthquake clusters consisting of similar waveforms. Repeating waveforms are often recorded at volcanoes, where, however, the crust structure is expected to contain strong heterogeneities and therefore the 1D velocity model assumption that is made in most location strategies is not likely to describe reality. A peculiar cluster of repeating low-frequency seismic events was recorded on the south flank of Katla volcano (Iceland) from 2011. As the hypocentres are located at the rim of the glacier, the seismicity may be due to volcanic or glacial processes. Information on the size and shape of the cluster may help constraining the source process. The extreme similarity of waveforms points to a very small spatial distribution of hypocentres. In order to extract meaningful information about size and shape of the cluster, we minimize uncertainty by optimizing the cross-correlation measurements and relative-relocation process. With a synthetic test we determine the best parameters for differential-time measurements and estimate their uncertainties, specifically for each waveform. We design a relocation strategy to work without a predefined velocity model, by formulating and inverting the problem to seek changes in both location and slowness, thus accounting for azimuth, take-off angles and velocity deviations from a 1D model. We solve the inversion explicitly in order to propagate data errors through the calculation. With this approach we are able to resolve a source volume few tens of meters wide on horizontal directions and around 100 meters in depth. There is no suggestion that the hypocentres lie on a single fault plane and the depth distribution indicates that their source is unlikely to be related to glacial processes as the ice thickness is not expected to exceed few tens of meters in the source area.
    Description: Published
    Description: 1244–1257
    Description: 5T. Sismologia, geofisica e geologia per l'ingegneria sismica
    Description: JCR Journal
    Keywords: Physics - Geophysics; Physics - Geophysics
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 71
    Publication Date: 2022-11-09
    Description: In recent decades, geological modeling has significantly evolved, relying on the growing potential of hardware and software to manage and integrate vast datasets of 2D-3D geophysical underground data. Therefore, digitization and integration with other forms of data can often improve understanding of geological systems, even when using so-called vintage or historical data. Seismic reflection data have been extensively acquired mainly for hydrocarbon exploration since the 60s generating large volumes of data. Typically, these data have been for private commercial use and are relatively unavailable for research. However, with time, large volumes of vintage seismic reflection data in many countries worldwide are now becoming publicly available through time-based de-classification schemes. Such data have a great potential for modern-day geo-research, unleashing opportunities to improve geological understanding through re-interpretation with modern methods. However, a downside of these vintage data is that they are often only available in analog (paper, raster) format. The vectorization of these data then constitutes an essential step for unlocking their research potential. In 2018 INGV established the SISMOLAB-3D infrastructure, which is mainly devoted to analyzing digital subsurface data, such as seismic reflection profiles and well-logs, to build 2D-3D geological models, principally for seismotectonics, seismic hazard assessment, and geo-resources applications. In this contribution, we discuss the robustness of the WIGGLE2SEGY code, firstly published by Sopher in 2018, focusing on examples from different tectonic and geodynamic contexts within Italian territory. We applied the SEG-Y conversion method to onshore and offshore raster seismic profiles related to ceased exploration permits, comparing the results with other published archives of SEG-Y data obtained from the conversion of vintage data. Such an approach results in digital SEG-Y files with unprecedented quality and detail. The systematic application of this method will allow the construction of a comprehensive dataset of digital SEG-Y seismic profiles across Italy, thereby expanding and sharing the INGV SISMOLAB-3D portfolio with the scientific community to foster innovative and advanced scientific analysis.
    Description: Published
    Description: DM538
    Description: 1TR. Georisorse
    Description: 2TR. Ricostruzione e modellazione della struttura crostale
    Description: 2IT. Laboratori analitici e sperimentali
    Description: JCR Journal
    Keywords: Vectorization of vintage seismic profiles into SEG-Y ; WIGGLE2SEGY MATLAB-based code ; Seismic profiles digital database ; Italian territory ; 2D/3D geological models ; 04.02. Exploration geophysics ; 05.06. Methods ; 05.04. Instrumentation and techniques of general interest
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  • 72
    Publication Date: 2022-11-23
    Description: In Italy, historical research on earthquakes has a long and glorious tradition, which in recent decades has gone through very different phases. In the first half of the 1980s and up to the mid- 90s, two very demanding research ventures were developed: the research program financed by ENEL for the qualification of sites susceptible to nuclear plants in three areas of the country (Piedmont, Lombardy, Puglia), later merged into the “Catalog of Strong Italian Earthquakes” (CFTI) of the ING/INGV, and the “Hazard project” of the GNDT/CNR, aimed at preparing all the basic data necessary for a model of hazard updated. As part of these two ventures, for about a decade over a hundred researchers, mostly “professional” historians, have worked to update their knowledge of Italian historical earthquakes. Researches developed by the “Hazard Project” - complementary to those of the CFTI - aimed only at rapidly re-evaluating the knowledge on about 600 intermediate energy earthquakes. Some of these studies, after a couple of decades, are now largely obsolete. For this reason, a work plan was launched aimed at deepening the knowledge on several dozens of these studies, marked in the current Parametric Catalog of Italian Earthquakes (CPTI15) by the initials AMGNDT95, providing them with an updated and, hopefully, better database. This work presents the results of research carried out on 6 earthquakes included in the 1949– 1971 time span. Such researches have allowed a significant improvement of the epicentral parameters of these earthquakes and, at the same time, an enhancement of seismic histories of numerous localities.
    Description: Lavoro realizzato nell’ambito della Convenzione fra INGV e Dipartimento nazionale della Protezione Civile, Allegato B2.
    Description: Published
    Description: 1-274
    Description: 4T. Sismicità dell'Italia
    Description: JCR Journal
    Keywords: Sismicità minore ; Catalogo sismico ; Revisione di terremoti ; Minor seismicity ; Earthquake catalog ; Earthquakes reappraisal ; 04.06. Seismology
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  • 73
    Publication Date: 2022-11-10
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Sassenhagen, I., Erdner, D., Lougheed, B., Richlen, M., & SjÖqvist, C. Estimating genotypic richness and proportion of identical multi-locus genotypes in aquatic microalgal populations. Journal of Plankton Research, 44(4), (2022): 559-572, https://doi.org/10.1093/plankt/fbac034.
    Description: The majority of microalgal species reproduce asexually, yet population genetic studies rarely find identical multi-locus genotypes (MLG) in microalgal blooms. Instead, population genetic studies identify large genotypic diversity in most microalgal species. This paradox of frequent asexual reproduction but low number of identical genotypes hampers interpretations of microalgal genotypic diversity. We present a computer model for estimating, for the first time, the number of distinct MLGs by simulating microalgal population composition after defined exponential growth periods. The simulations highlighted the effects of initial genotypic diversity, sample size and intraspecific differences in growth rates on the probability of isolating identical genotypes. We estimated the genotypic richness for five natural microalgal species with available high-resolution population genetic data and monitoring-based growth rates, indicating 500 000 to 2 000 000 distinct genotypes for species with few observed clonal replicates (〈5%). Furthermore, our simulations indicated high variability in genotypic richness over time and among microalgal species. Genotypic richness was also strongly impacted by intraspecific variability in growth rates. The probability of finding identical MLGs and sampling a representative fraction of genotypes decreased noticeably with smaller sample sizes, challenging the detection of differences in genotypic diversity with typical isolate numbers in the field.
    Description: This work was supported by the Olle Engkvist foundation [200-0564 to I.S.]; the Swedish Research Council (Vetenskapsrådet) [2018-04992 to B.C.L.]; the Academy of Finland [321609 to C.S.]; the National Science Foundation [NSF OCE-1841811 to D.L.E. and M.L.R.]; and the National Institute of Environmental Health [NIEHS P01ES028949 to M.L.R.].
    Repository Name: Woods Hole Open Access Server
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  • 74
    Publication Date: 2022-11-15
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Shero, M. R., Kirkham, A. L., Costa, D. P., & Burns, J. M. Iron mobilization during lactation reduces oxygen stores in a diving mammal. Nature Communications, 13(1), (2022): 4322, https://doi.org/10.1038/s41467-022-31863-7.
    Description: The profound impacts that maternal provisioning of finite energy resources has on offspring survival have been extensively studied across mammals. This study shows that in addition to calories, high hemoprotein concentrations in diving mammals necessitates exceptional female-to-pup iron transfer. Numerous indices of iron mobilization (ferritin, serum iron, total-iron-binding-capacity, transferrin saturation) were significantly elevated during lactation in adult female Weddell seals (Leptonychotes weddellii), but not in skip-breeders. Iron was mobilized from endogenous stores for incorporation into the Weddell seal’s milk at concentrations up to 100× higher than terrestrial mammals. Such high rates of iron offload to offspring drew from the female’s own heme stores and led to compromised physiologic dive capacities (hemoglobin, myoglobin, and total body oxygen stores) after weaning their pups, which was further reflected in shorter dive durations. We demonstrate that lactational iron transfer shapes physiologic dive thresholds, identifying a cost of reproduction to a marine mammal.
    Description: This research was conducted with support from NSF ANT-0838892 to DPC; ANT-0838937 and ANT-1246463 to JMB (which also supported ALK and MRS); and The Investment in Science Fund at WHOI to MRS.
    Keywords: Animal physiology ; Ecophysiology ; Homeostasis
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  • 75
    Publication Date: 2022-11-18
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Shu, Y., Nielsen, S. G., Le Roux, V., Wörner, G., Blusztajn, J., & Auro, M. Sources of dehydration fluids underneath the Kamchatka arc. Nature Communications, 13(1), (2022): 4467, https://doi.org/10.1038/s41467-022-32211-5.
    Description: Fluids mediate the transport of subducted slab material and play a crucial role in the generation of arc magmas. However, the source of subduction-derived fluids remains debated. The Kamchatka arc is an ideal subduction zone to identify the source of fluids because the arc magmas are comparably mafic, their source appears to be essentially free of subducted sediment-derived components, and subducted Hawaii-Emperor Seamount Chain (HESC) is thought to contribute a substantial fluid flux to the Kamchatka magmas. Here we show that Tl isotope ratios are unique tracers of HESC contribution to Kamchatka arc magma sources. In conjunction with trace element ratios and literature data, we trace the progressive dehydration and melting of subducted HESC across the Kamchatka arc. In succession, serpentine (〈100 km depth), lawsonite (100–250 km depth) and phengite (〉250 km depth) break down and produce fluids that contribute to arc magmatism at the Eastern Volcanic Front (EVF), Central Kamchatka Depression (CKD), and Sredinny Ridge (SR), respectively. However, given the Tl-poor nature of serpentine and lawsonite fluids, simultaneous melting of subducted HESC is required to explain the HESC-like Tl isotope signatures observed in EVF and CKD lavas. In the absence of eclogitic crust melting processes in this region of the Kamchatka arc, we propose that progressive dehydration and melting of a HESC-dominated mélange offers the most compelling interpretation of the combined isotope and trace element data.
    Description: This study was financially supported by grants from the National Natural Science Foundation of China (NSFC) (Grant No. 41903008) and Chinese Postdoctoral Science Foundation (Grant No. 2019M660153) to Y.S., NSF (Grant No. EAR-1829546) to S.G.N. and NSF (Grant No. EAR-1855302) to V.L.R.
    Keywords: Geochemistry ; Marine chemistry
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  • 76
    Publication Date: 2022-12-21
    Description: We present here the results of a five-years-long earthquake educational project aiming to commemorate the hundredth anniversaries of five large Northern Apennines earthquakes occurred between 1916 and 1920 in the areas of: Rimini (1916, Mw 6.1), Valtiberina (1917, Mw 5.9), Romagna Apennines (1918, Mw 5.9), Mugello (1919, Mw 6.3) and Garfagnana (1920, Mw 6.5) earthquakes. We saw these anniversaries as the occasion for leading the Northern Apennines people to rediscover their past, in a positive way, and to improve their awareness of the earthquake as a natural feature of the regions in which they live. The activities that we planned for schools students encouraged them to go hunting for traces of the earthquakes of one hundred years ago in their home towns and to rediscover the memories and traditions of their communities. Together with their teachers, we also led the teenagers to find creative ways to involve the grownups in the process of discovery and knowledge. The Project had to cope with two emergencies: the great Central Italy earthquake of 2016-2017 and the Covid-19 epidemic. However, these stumbling blocks did not deter teachers and students from taking part in the process actively and even enthusiastically. Their families and communities were actively involved too. This experience taught us some valuable lessons. First of all, we learned to adapt the project, as we had conceived it at the start, to a wide gamma of social and cultural contexts. Not all the involved communities were equally aware of the level of seismic risk they are exposed to. On the affluent Adriatic coast, where tourism is the main source of income, past earthquakes are something best forgotten, by citizens and administrators alike. On the contrary, in the poorer inland mountain areas (Forlivese Apennines, Mugello, Garfagnana and Lunigiana) a more down-to-earth attitude prevails: earthquakes are looked upon as something that can and does happen and people are quick to grasp how important it is to contribute to initiatives whose aim is reducing seismic risk. Thus, we had to adapt our approach to the different contexts, modifying each time the activities we proposed to the schools with the aim of obtain the best possible results from each situation. Presentiamo i risultati di un progetto di educazione al rischio sismico attivato in occasione dei centenari di cinque terremoti storici che hanno colpito l’Appennino settentrionale tra gli anni 1916 e 1920 e precisamente i terremoti di Rimini 1916 (Mw 6.1), Valtiberina 1917 (Mw 5.9), Appennino romagnolo 1918 (Mw 5.9), Mugello 1919 (Mw 6.3) e Garfagnana 1920 (Mw 6.5). Abbiamo pensato di utilizzare questi anniversari come punto di partenza per accompagnare i cittadini a riappropriarsi del loro passato in modo positivo, facendo crescere la loro consapevolezza del terremoto come un carattere del loro ambiente naturale. A tal fine, nelle attività realizzate con le scuole, abbiamo incoraggiato gli studenti a cercare le tracce dei terremoti di un secolo fa nell’ambiente urbanizzato e a indagare le memorie e le tradizioni ancora presenti nelle comunità. Insieme ai loro insegnanti abbiamo spinto i ragazzi a trovare modi creativi per coinvolgere gli adulti in questo processo di scoperta e conoscenza. Il progetto è stato messo alla prova dal forte terremoto dell’Italia centrale (2016­2017) e dall’epidemia di Covid­19, ma nonostante queste difficoltà insegnanti e studenti hanno partecipato con grande interesse a questo percorso e hanno coinvolto nelle attività del progetto le famiglie e le comunità locali. Anche noi abbiamo imparato nuove lezioni. Un aspetto importante che abbiamo appreso è il bisogno di adattare il progetto a contesti sociali e culturali che si sono rivelati molto diversi. Le comunità coinvolte non condividono lo stesso livello di consapevolezza del rischio: sulla costa adriatica, a vocazione turistica, i terremoti sono qualcosa che è meglio dimenticare, sia da parte dei cittadini che dalle amministrazioni. Al contrario, nell’Appennino forlivese, nel Mugello, in Garfagnana e Lunigiana, i terremoti sono una presenza costante e le persone si sono sentite subito coinvolte in un processo attivo di riduzione del rischio e di attenzione quotidiana. Questo ci ha spinto ad adattare ogni volta l’approccio ai diversi contesti, modificando le proposte di attività che abbiamo realizzato nelle scuole.
    Description: Lavoro realizzato nell’ambito della Convenzione fra INGV e Dipartimento della Protezione Civile, Allegato A, tematica “M”.
    Description: Published
    Description: 1-40
    Description: 5SR TERREMOTI - Convenzioni derivanti dall'Accordo Quadro decennale INGV-DPC
    Description: JCR Journal
    Keywords: EDURISK Educazione al rischio ; Rischio sismico ; Edurisk: risk education ; Seismic risk ; 04.06. Seismology ; Risk education
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  • 77
    Publication Date: 2022-12-01
    Description: The Global Navigation Satellite System (GNSS) represents a primary data source in Solid Earth Sciences. In order to investigate the Earth’s crustal deformation, time series of the estimated daily positions of the stations are routinely analyzed at the Istituto Nazionale di Geofisica e Vulcanologia (INGV) to investigate the deformation of the Earth’s surface caused by tectonic and non-tectonic processes. The GNSS observations of the stations are processed using the three main scientific software: GAMIT/GLOBK, BERNESE, and GIPSY OASIS II. The accuracy and the strength of geodetic solutions often depend on the geometry and spatial density of the network, and the availability and quality of GNSS data. In many circumstances, GNSS networks are deployed for topographic purposes by private or public institutions, and a significant number of GNSS stations in large regions acquire continuous observations. It may happen that such networks do not collect and distribute data according to IGS standards, so it could be difficult to analyze this data using automated data-processing tools. For that reason, this data is often ignored or partially used by the scientific community, despite their potential usefulness in geodynamic studies. We have attempted troubleshooting this problem by establishing a centralized storage facility in order to collect all available GNSS data and standardize both formats and metadata information. Here we describe the processes and functions that manage this unified repository, called MGA (Mediterranean GNSS Archive), which regularly collects GNSS RINEX files from alarge number of CORS (Continuously Operating Reference Station) located across a wide region of mainly the European and African plates. RINEX observation data and metadata information are provided to the analysts through an FTP server and dedicated web-services. The complete data set is stored in a PostgreSQL database in order to easily retrieve pieces of information and efficiently manage the archive content. The system implements many high-level services that include scripts to download files from remote archives and to detect new available data, web applications such as API (Application Program Interface) to interact with the system, and background services that interact with the database. During the development of this product, particular attention was paid to what has already been achieved by EPOS TCS WP10, whose objective was: "[...] to develop an open source platform with programmatic and web interfaces to store and disseminate raw data and metadata from GNSS stations operating in Europe''. Many ideas and tools presented here were inspired by that project.
    Description: Published
    Description: 1-18
    Description: 2T. Deformazione crostale attiva
    Description: 1IT. Reti di monitoraggio e sorveglianza
    Description: 4IT. Banche dati
    Description: N/A or not JCR
    Keywords: RINEX ; GNSS ARCHIVE ; GNSS MEDITERRANEAN AREA ; 04.03. Geodesy
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 78
    Publication Date: 2022-12-01
    Description: SISMIKO è uno dei Gruppi Operativi di emergenza sismica dell’Istituto Nazionale di Geofisica e Vulcanologia (INGV) con la principale missione di installare, nel più breve tempo possibile, una rete sismica temporanea in tempo reale ad integrazione di quella permanente nell’area colpita da un forte terremoto e/o da una sequenza sismica [Moretti et al., 2012; 2016]. SISMIKO nasce formalmente nel 2015 ed è il frutto della convergenza di reti sismiche mobili gestite da diversi gruppi all’interno delle singole Sezioni e sedi dell’Ente. Ognuna di queste reti risente della propria storia, risponde ad esigenze territoriali diverse ed è caratterizzata da vari gradi di coinvolgimento nella gestione della Rete Sismica Nazionale (RSN) [Michelini et al., 2016; Margheriti et al., 2020]. Questa eterogeneità si riflette anche in differenze nel sistema di acquisizione dati delle stazioni gestite dal GO. Grazie ad una attenta predisposizione e configurazione della propria strumentazione, oggi SISMIKO ha la possibilità e le competenze per integrare in poche ore una rete temporanea trasmessa in tempo reale nel sistema di acquisizione dati sismologici attivo presso la sede INGV di Roma, contribuendo in maniera significativa al servizio di monitoraggio e sorveglianza sismica del territorio colpito dall’emergenza [Margheriti et al., 2020]. Nel corso del 2020, facendo seguito al piano di rinnovo e omogeneizzazione del parco strumentale dedicato GO avviato nel 2019 (co­finanziato nell’ambito della Convenzione tra INGV e il Dipartimento di Protezione Civile vigente), è stato deciso di sviluppare un sistema di acquisizione dati in tempo reale unificato per tutte le stazioni di SISMIKO, indipendente dalle singole sedi di appartenenza. Questa nuova logica ha diversi vantaggi, e in primis quello di rendere possibile il completo interscambio del personale presso le varie sedi INGV nella gestione dell’acquisizione dati, aspetto fondamentale durante una emergenza.
    Description: Published
    Description: 1-26
    Description: 2SR TERREMOTI - Gestione delle emergenze sismiche e da maremoto
    Description: N/A or not JCR
    Keywords: SISMIKO ; Seiscomp. RTPD ; Acquisition system ; Realtime seismology ; 05.04. Instrumentation and techniques of general interest
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 79
    Publication Date: 2022-06-24
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Page, H. N., Bahr, K. D., Cyronak, T., Jewett, E. B., Johnson, M. D., & McCoy, S. J. Responses of benthic calcifying algae to ocean acidification differ between laboratory and field settings. Ices Journal of Marine Science, 79(1), (2022): 1–11, https://doi.org/10.1093/icesjms/fsab232.
    Description: Accurately predicting the effects of ocean and coastal acidification on marine ecosystems requires understanding how responses scale from laboratory experiments to the natural world. Using benthic calcifying macroalgae as a model system, we performed a semi-quantitative synthesis to compare directional responses between laboratory experiments and field studies. Variability in ecological, spatial, and temporal scales across studies, and the disparity in the number of responses documented in laboratory and field settings, make direct comparisons difficult. Despite these differences, some responses, including community-level measurements, were consistent across laboratory and field studies. However, there were also mismatches in the directionality of many responses with more negative acidification impacts reported in laboratory experiments. Recommendations to improve our ability to scale responses include: (i) developing novel approaches to allow measurements of the same responses in laboratory and field settings, and (ii) researching understudied calcifying benthic macroalgal species and responses. Incorporating these guidelines into research programs will yield data more suitable for robust meta-analyses and will facilitate the development of ecosystem models that incorporate proper scaling of organismal responses to in situ acidification. This, in turn, will allow for more accurate predictions of future changes in ecosystem health and function in a rapidly changing natural climate.
    Description: We would like to thank the Ocean Carbon and Biogeochemistry Program for organizing the fourth U.S. Ocean Acidification Principal Investigators meeting, which is where this synthesis was conceived. HNP was a postdoctoral research fellow at Mote Marine Laboratory. MDJ is a postdoctoral scholar at Woods Hole Oceanographic Institution. SJM is a Norma J. Lang early career fellow of the Phycological Society of America.
    Repository Name: Woods Hole Open Access Server
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  • 80
    Publication Date: 2022-06-22
    Description: In this paper we simulate the earthquake that hit the city of L'Aquila on the 6th of April 2009 using SPEED (SPectral Elements in Elastodynamics with Discontinuous Galerkin), an open-source code able to simulate the propagation of seismic waves in complex three-dimensional (3D) domains. Our model includes an accurate 3D recon- struction of the Quaternary deposits, according to the most up-to-date data obtained from the Microzonation studies in Central Italy and a detailed model of the topography incorporated using a newly developed tool (May et al. 2021). The sensitivity of our results with respect to dfferent kinematic seismic sources is inves- tigated. The results obtained are in good agreement with the recordings at the available seismic stations at epicentral distances within a range of 20km. Finally, a blind source prediction scenario application shows a reasonably good agreement between simulations and recordings can be obtained by simulating stochastic rupture realizations with basic input data. These results, although limited to nine simulated scenarios, demonstrate that it is possible to obtain a satisfactory reconstruction of a ground shaking scenario employing a stochastic source constrained on a limited amount of ex-ante information. A similar approach can be used to model future and past earthquakes for which little or no information is typically available, with potential relevant implications for seismic risk assessment.
    Description: Published
    Description: 29–49
    Description: 3T. Fisica dei terremoti e Sorgente Sismica
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 81
    Publication Date: 2022-06-22
    Description: For the phase refraction index of high frequency (HF) waves in the ionospheric medium exists a well-established theory. However, under the Quasi-Longitudinal (QL) conditions, scientific literature presents various formulas that are not equivalent and that, in some cases, give rise to wrong results. In the present study, further consequences of Booker's rule are discussed, illustrating the validity ranges of the above-mentioned approximate formulas; and the different regimes for applying such QL formulas are described, along with the consequences in simulating the ionospheric HF ray-tracing, oblique and vertical sounding, and absorption.
    Description: Published
    Description: PA003
    Description: 2A. Fisica dell'alta atmosfera
    Description: 7SR AMBIENTE – Servizi e ricerca per la società
    Description: 3IT. Calcolo scientifico
    Description: 7TM.Sviluppo e Trasferimento Tecnologico
    Description: JCR Journal
    Keywords: Appleton-Hartree’s formula ; Booker’s rule ; ″Strong″ and ″weak″ Quasi-Longitudinal (QL) conditions ; Walker’s approximation ; Ionospheric HF ray-tracing, oblique and vertical sounding, and absorption ; 01. Atmosphere::01.02. Ionosphere::01.02.99. General or miscellaneous ; 01. Atmosphere::01.02. Ionosphere::01.02.04. Plasma Physics ; 01. Atmosphere::01.02. Ionosphere::01.02.05. Wave propagation ; 05. General::05.01. Computational geophysics::05.01.99. General or miscellaneous ; 05. General::05.01. Computational geophysics::05.01.05. Algorithms and implementation
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 82
    Publication Date: 2022-06-22
    Description: This article has been accepted for publication in Geophysical Journal International ©: The Authors 2022. Published by Oxford University Press on behalf of the Royal Astronomical Society. All rights reserved. Uploaded in accordance with the publisher's self-archiving policy.
    Description: On 29 December 2020, a shallow earthquake of magnitude Mw 6.4 struck northern Croatia, near the town of Petrinja, more than 24 hours after a strong foreshock (Ml 5). We formed a reconnaissance team of European geologists and engineers, from Croatia, Slovenia, France, Italy and Greece, rapidly deployed in the field to map the evidence of coseismic environmental effects. In the epicentral area, we recognized surface deformation, such as tectonic breaks along the earthquake source at the surface, liquefaction features (scattered in the fluvial plains of Kupa, Glina and Sava rivers), and slope failures, both caused by strong motion. Thanks to this concerted, collective and meticulous work, we were able to document and map a clear and unambiguous coseismic surface rupture associated with the main shock. The surface rupture appears discontinuous, consisting of multi-kilometer en échelon right stepping sections, along a NW-SE striking fault that we call the Petrinja-Pokupsko Fault (PPKF). The observed deformation features, in terms of kinematics and trace alignments, are consistent with slip on a right lateral fault, in agreement with the focal solution of the main shock. We found mole tracks, displacement on faults affecting natural features (e. g. drainage channels), scarplets, and more frequently breaks of anthropogenic markers (roads, fences). The surface rupture is observed over a length of ∼13 km from end-to-end, with a maximum displacement of 38 cm, and an average displacement of ∼10 cm. Moreover, the liquefaction extends over an area of nearly 600 km² around the epicenter. Typology of liquefaction features include sand blows, lateral spreading phenomenon along the road and river embankments, as well as sand ejecta of different grain size and matrix. Development of large and long fissures along the fluvial landforms, current or ancient, with massive ejections of sediments is pervasive. These features are sometimes accompanied by small horizontal displacements. Finally, the environmental effects of the earthquake appear to be reasonably consistent with the usual scaling relationships, in particular the surface faulting. This rupture of the ground occurred on or near traces of a fault that shows clear evidence of Quaternary activity. Further and detailed studies will be carried out to characterize this source and related faults in terms of future large earthquakes potential, for their integration into seismic hazard models.
    Description: Published
    Description: 1394–1418
    Description: 2T. Deformazione crostale attiva
    Description: JCR Journal
    Keywords: Seismicity and tectonics ; Earthquake hazards ; Coseismic effects ; M6.4 Petrinja earthquake (Croatia)
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 83
    Publication Date: 2022-09-01
    Description: In the last years the scientific literature has been enriched with new models of the Moho depth in the Antarctica Continent derived by the seismic reflection technique and refraction profiles, receiver functions and seismic surface waves, but also by gravimetric observations over the continent. In particular, the gravity satellite missions of the last two decades have provided data in this remote region of the Earth and have allowed the investigation of the crust properties. Meanwhile, other important contributions in this direction has been given by the fourth International Polar Year (IPY, 2007–2008) which started seismographic and geodetic networks of unprecedented duration and scale, including airborne gravimetry over largely unexplored Antarctic frontiers. In this study, a new model for the Antarctica Moho depths is proposed. This new estimation is based on no satellite gravity measures, thanks to the availability of the gravity database ANTGG2015, that collects gravity data from ground-base, airborne and shipborne campaigns. In this new estimate of the Moho depths the contribution of the gravity measures has been maximized reducing any correction of the gravity measures and avoiding constraints of the solution to seismological observations and to geological evidence. With this approach a pure gravimetric solution has been determined. The model obtained is pretty in agreement with other Moho models and thanks to the use of independent data it can be exploited also for cross-validating different Moho depths solutions.
    Description: Published
    Description: 1404–1420
    Description: 1T. Struttura della Terra
    Description: JCR Journal
    Keywords: Antarctica ; Moho ; Gravity inversion ; Collocation ; ANTGG2015
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 84
    facet.materialart.
    Unknown
    Oxford University Press
    In:  EPIC3Geophysical Journal International, Oxford University Press, 231, pp. 1959-1981
    Publication Date: 2022-09-16
    Description: Seismic reflection and refraction data were collected in 2007 and 2012 to reveal the crustal fabric on a single long composite profile offshore Prydz Bay, East Antarctica. A P-wave velocity model provides insights on the crustal fabric, and a gravity-constrained density model is used to describe the crustal and mantle structure. The models show that a 230-km- wide continent–ocean transition separates stretched continental from oceanic crust along our profile. While the oceanic crust close to the continent–ocean boundary is just 3.5–5 km thick, its thickness increases northwards towards the Southern Kerguelen Plateau to 12 km. This change is accompanied by thickening of a lower crustal layer with high P-wave velocities of up to 7.5 km s–1, marking intrusive rocks emplaced beneath the mid-ocean ridge under increasing influence of the Kerguelen plume. Joint interpretations of our crustal model, seismic reflection data and magnetic data sets constrain the age and extent of oceanic crust in the research area. Oceanic crust is shown to continue to around 160 km farther south than has been interpreted in previous data, with profound implications for plate kinematic models of the region. Finally, by combining our findings with a regional magnetic data compilation and regional seismic reflection data we propose a larger extent of oceanic crust in the Enderby Basin than previously known.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 85
    Publication Date: 2022-05-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Lasek-Nesselquist, E., & Johnson, M. D. A phylogenomic approach to clarifying the relationship of Mesodinium within the Ciliophora: a case study in the complexity of mixed-species transcriptome analyses. Genome Biology and Evolution, 11(11), (2019): 3218–3232, doi:10.1093/gbe/evz233.
    Description: Recent high-throughput sequencing endeavors have yielded multigene/protein phylogenies that confidently resolve several inter- and intra-class relationships within the phylum Ciliophora. We leverage the massive sequencing efforts from the Marine Microbial Eukaryote Transcriptome Sequencing Project, other SRA submissions, and available genome data with our own sequencing efforts to determine the phylogenetic position of Mesodinium and to generate the most taxonomically rich phylogenomic ciliate tree to date. Regardless of the data mining strategy, the multiprotein data set, or the molecular models of evolution employed, we consistently recovered the same well-supported relationships among ciliate classes, confirming many of the higher-level relationships previously identified. Mesodinium always formed a monophyletic group with members of the Litostomatea, with mixotrophic species of Mesodinium—M. rubrum, M. major, and M. chamaeleon—being more closely related to each other than to the heterotrophic member, M. pulex. The well-supported position of Mesodinium as sister to other litostomes contrasts with previous molecular analyses including those from phylogenomic studies that exploited the same transcriptomic databases. These topological discrepancies illustrate the need for caution when mining mixed-species transcriptomes and indicate that identifying ciliate sequences among prey contamination—particularly for Mesodinium species where expression from stolen prey nuclei appears to dominate—requires thorough and iterative vetting with phylogenies that incorporate sequences from a large outgroup of prey.
    Description: We thank David Beaudoin and Holly V. Moeller for their assistance in collecting cells and extracting RNA. We thank the Josephine Bay Paul Center for Comparative Molecular Biology and Evolution at the Marine Biological Laboratory for the generous use of their servers. This work was supported in part by a National Science Foundation grant to both authors (IOS 1354773).
    Keywords: Mesodinium ; Litostomatea ; ciliate phylogenomics ; mixed-species transcriptomes ; sequence contamination
    Repository Name: Woods Hole Open Access Server
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  • 86
    Publication Date: 2022-05-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Giuffre, C., Hinow, P., Jiang, H., & Strickler, J. R. Oscillations in the near-field feeding current of a calanoid copepod are useful for particle sensing. Scientific Reports, 9(1), (2019): 17742, doi: 10.1038/s41598-019-54264-1.
    Description: Calanoid copepods are small crustaceans that constitute a major element of aquatic ecosystems. Key to their success is their feeding apparatus consisting of sensor-studded mouth appendages that are in constant motion. These appendages generate a feeding current to enhance the encounter probability with food items. Additionally, sensing enables the organism to determine the position and quality of food particles, and to alter the near-field flow to capture and manipulate the particles for ingestion or rejection. Here we observe a freely swimming copepod Leptodiaptomus sicilis in multiple perspectives together with suspended particles that allow us to analyse the flow field created by the animal. We observe a highly periodic motion of the mouth appendages that is mirrored in oscillations of nearby tracer particles. We propose that the phase shift between the fluid and the particle velocities is sufficient for mechanical detection of the particles entrained in the feeding current. Moreover, we propose that an immersed algal cell may benefit from the excitation by increased uptake of dissolved inorganic compounds.
    Description: We acknowledge funding from the Simons Foundation (grant #278436 to PH) during two visits of HJ to Milwaukee. HJ was also supported by NSF grant OCE-1559062. We thank Dr. Russell Cuhel (School of Freshwater Sciences, University of Wisconsin - Milwaukee) for collecting the animals from Lake Michigan and four unknown readers for valuable comments.
    Repository Name: Woods Hole Open Access Server
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  • 87
    Publication Date: 2022-05-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Barry, P. H., Nakagawa, M., Giovannelli, D., de Moor, J. M., Schrenk, M., Seltzer, A. M., Manini, E., Fattorini, D., di Carlo, M., Regoli, F., Fullerton, K., & Lloyd, K. G. Helium, inorganic and organic carbon isotopes of fluids and gases across the Costa Rica convergent margin. Scientific Data, 6(1), (2019): 284, doi: 10.1038/s41597-019-0302-4.
    Description: In 2017, fluid and gas samples were collected across the Costa Rican Arc. He and Ne isotopes, C isotopes as well as total organic and inorganic carbon concentrations were measured. The samples (n = 24) from 2017 are accompanied by (n = 17) samples collected in 2008, 2010 and 2012. He-isotopes ranged from arc-like (6.8 RA) to crustal (0.5 RA). Measured dissolved inorganic carbon (DIC) δ13CVPDB values varied from 3.55 to −21.57‰, with dissolved organic carbon (DOC) following the trends of DIC. Gas phase CO2 only occurs within ~20 km of the arc; δ13CVPDB values varied from −0.84 to −5.23‰. Onsite, pH, conductivity, temperature and dissolved oxygen (DO) were measured; pH ranged from 0.9–10.0, conductivity from 200–91,900 μS/cm, temperatures from 23–89 °C and DO from 2–84%. Data were used to develop a model which suggests that ~91 ± 4.0% of carbon released from the slab/mantle beneath the Costa Rican forearc is sequestered within the crust by calcite deposition with an additional 3.3 ± 1.3% incorporated into autotrophic biomass.
    Description: This work was principally supported by a grant (G-2016-7206) from the Alfred P. Sloan Foundation and the Deep Carbon Observatory to P.H.B. In addition, P.H.B. was supported by NSF grant 1144559 during a portion of this project. D.G. was supported by an NSF grant (MCB 15–17567) and an ELSI Origins Network (EON) research Fellowship, which is supported by a grant from the John Templeton Foundation. The opinions expressed in this publication are those of the authors and do not necessarily reflect the views of the John Templeton Foundation. DG was also partially supported a Deep Life Modeling and Visualization Fellowship, which is supported by the Deep Carbon Observatory. This work was further supported in party by JSPS KAKENHI grants (JP17K14412, JP17H06105, JP17H02989) awarded to M.N., NSF OCE-1431598 and NASA Exobiology NNX16AL59G awarded to K.G.L. J.M.d.M. gratefully acknowledges funding from Universidad Nacional Costa Rica, the World Bank, and the Costa Rican Ley Transitorio 8933 used to acquire a laser carbon isotope system in collaboration with R. Sánchez-Murillo and G. Esquivel-Hernandez. M.N. produced the most data. We thank Patricia Barcala Dominguez for assistance with figure illustration. We thank Bruce Deck, Marten Wahlen and Keith Blackmon for analytical assistance at SIO. Finally, we acknowledge D. Hummer, T. Lopez, C.A. Pratt, Y. Alpízar Segura, A. Battaglia, P. Beaudry, G. Bini, M. Cascante, G. d’Errico, K. Fullerton, E. Gazel, G. González, S. A. Halldórsson, K. Iacovino, T. Ilanko, J.T. Kulongoski, M. Martínez, H. Miller, S. Ono, S. Patwardhan, C.J. Ramírez, F. Smedile, S. Turner, C. Vetriani, M. Yücel, C.J. Ballentine, T.P. Fischer, and D.R. Hilton, who were instrumental in proposal writing, sample collection, sample analysis and data analysis.
    Repository Name: Woods Hole Open Access Server
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  • 88
    Publication Date: 2022-05-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Chaput, D. L., Fowler, A. J., Seo, O., Duhn, K., Hansel, C. M., & Santelli, C. M. Mn oxide formation by phototrophs: spatial and temporal patterns, with evidence of an enzymatic superoxide-mediated pathway. Scientific Reports, 9(1), (2019): 18244, doi: 10.1038/s41598-019-54403-8.
    Description: Manganese (Mn) oxide minerals influence the availability of organic carbon, nutrients and metals in the environment. Oxidation of Mn(II) to Mn(III/IV) oxides is largely promoted by the direct and indirect activity of microorganisms. Studies of biogenic Mn(II) oxidation have focused on bacteria and fungi, with phototrophic organisms (phototrophs) being generally overlooked. Here, we isolated phototrophs from Mn removal beds in Pennsylvania, USA, including fourteen Chlorophyta (green algae), three Bacillariophyta (diatoms) and one cyanobacterium, all of which consistently formed Mn(III/IV) oxides. Isolates produced cell-specific oxides (coating some cells but not others), diffuse biofilm oxides, and internal diatom-specific Mn-rich nodules. Phototrophic Mn(II) oxidation had been previously attributed to abiotic oxidation mediated by photosynthesis-driven pH increases, but we found a decoupling of Mn oxide formation and pH alteration in several cases. Furthermore, cell-free filtrates of some isolates produced Mn oxides at specific time points, but this activity was not induced by Mn(II). Manganese oxide formation in cell-free filtrates occurred via reaction with the oxygen radical superoxide produced by soluble extracellular proteins. Given the known widespread ability of phototrophs to produce superoxide, the contribution of phototrophs to Mn(II) oxidation in the environment may be greater and more nuanced than previously thought.
    Description: This work was funded by a Smithsonian Scholarly Studies grant to CMS, by a Smithsonian Postdoctoral Fellowship to DLC, by the National Science Foundation, grant number CBET-1336496, to CMH and CMS, and by MnDRIVE Environment at the University of Minnesota to CMS. We thank Margaret Dunn and Cliff Denholm, Stream Restoration Inc., for assistance and access to field sites, Carolyn Zeiner (WHOI/Harvard) for useful discussions and advice regarding ROS experiments, as well as Jeff Post, Tim Rose and Tim Gooding (Smithsonian NMNH) for assistance with the SEM/EDS work. Portions of the laboratory work were conducted in and with the support of the L.A.B. facilities at the National Museum of Natural History, Smithsonian Institution.
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  • 89
    Publication Date: 2022-05-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Ciacci, C., Grimmelpont, M. V., Corsi, I., Bergami, E., Curzi, D., Burini, D., Bouchet, V. M. P., Ambrogini, P., Gobbi, P., Ujiié, Y., Ishitani, Y., Coccioni, R., Bernhard, J. M., & Frontalini, F. Nanoparticle-biological interactions in a marine benthic foraminifer. Scientific Reports, (91), (2019): 19441, doi:10.1038/s41598-019-56037-2.
    Description: The adverse effects of engineered nanomaterials (ENM) in marine environments have recently attracted great attention although their effects on marine benthic organisms such as foraminifera are still largely overlooked. Here we document the effects of three negatively charged ENM, different in size and composition, titanium dioxide (TiO2), polystyrene (PS) and silicon dioxide (SiO2), on a microbial eukaryote (the benthic foraminifera Ammonia parkinsoniana) using multiple approaches. This research clearly shows the presence, within the foraminiferal cytoplasm, of metallic (Ti) and organic (PS) ENM that promote physiological stress. Specifically, marked increases in the accumulation of neutral lipids and enhanced reactive oxygen species production occurred in ENM-treated specimens regardless of ENM type. This study indicates that ENM represent ecotoxicological risks for this microbial eukaryote and presents a new model for the neglected marine benthos by which to assess natural exposure scenarios.
    Description: The authors are very grateful to two anonymous reviewers for their thoughtful and valuable comments that have greatly improved our contribution. NP characterization by DLS was conducted at the facilities of the Department of Biotechnologies, Chemistry and Pharmacy of the University of Siena (Italy). The authors acknowledge Prof. Andrea M. Atrei for the support in DLS analysis. Margot V. Grimmelpont’s stay at Urbino University was supported by an ERASMUS + fellowship.
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  • 90
    Publication Date: 2022-05-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Xu, X., Li, G., Li, C., Zhang, J., Wang, Q., Simmons, D. K., Chen, X., Wijesena, N., Zhu, W., Wang, Z., Wang, Z., Ju, B., Ci, W., Lu, X., Yu, D., Wang, Q., Aluru, N., Oliveri, P., Zhang, Y. E., Martindale, M. Q., & Liu, J. Evolutionary transition between invertebrates and vertebrates via methylation reprogramming in embryogenesis. National Science Review, 6(5), (2019):993-1003, doi:10.1093/nsr/nwz064.
    Description: Major evolutionary transitions are enigmas, and the most notable enigma is between invertebrates and vertebrates, with numerous spectacular innovations. To search for the molecular connections involved, we asked whether global epigenetic changes may offer a clue by surveying the inheritance and reprogramming of parental DNA methylation across metazoans. We focused on gametes and early embryos, where the methylomes are known to evolve divergently between fish and mammals. Here, we find that methylome reprogramming during embryogenesis occurs neither in pre-bilaterians such as cnidarians nor in protostomes such as insects, but clearly presents in deuterostomes such as echinoderms and invertebrate chordates, and then becomes more evident in vertebrates. Functional association analysis suggests that DNA methylation reprogramming is associated with development, reproduction and adaptive immunity for vertebrates, but not for invertebrates. Interestingly, the single HOX cluster of invertebrates maintains unmethylated status in all stages examined. In contrast, the multiple HOX clusters show dramatic dynamics of DNA methylation during vertebrate embryogenesis. Notably, the methylation dynamics of HOX clusters are associated with their spatiotemporal expression in mammals. Our study reveals that DNA methylation reprogramming has evolved dramatically during animal evolution, especially after the evolutionary transitions from invertebrates to vertebrates, and then to mammals.
    Description: This work was supported by the National Key Research and Development Program of China (2018YFC1003303), the Strategic Priority Research Program of the CAS (XDB13040200), the National Natural Science Foundation of China (91519306, 31425015), the Youth Innovation Promotion Association of the CAS and the Key Research Program of Frontier Sciences, CAS (QYZDY-SSW-SMC016).
    Keywords: DNA methylation ; evolution ; development ; reprogramming
    Repository Name: Woods Hole Open Access Server
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  • 91
    Publication Date: 2022-05-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Marzen, R. E., Shillington, D. J., Lizarralde, D., Knapp, J. H., Heffner, D. M., Davis, J. K., & Harder, S. H. Limited and localized magmatism in the Central Atlantic Magmatic Province. Nature Communications, 11(1), (2020): 3397, doi:10.1038/s41467-020-17193-6.
    Description: The Central Atlantic Magmatic Province (CAMP) is the most aerially extensive magmatic event in Earth’s history, but many questions remain about its origin, volume, and distribution. Despite many observations of CAMP magmatism near Earth’s surface, few constraints exist on CAMP intrusions at depth. Here we present detailed constraints on crustal and upper mantle structure from wide-angle seismic data across the Triassic South Georgia Rift that formed shortly before CAMP. Lower crustal magmatism is concentrated where synrift sedimentary fill is thickest and the crust is thinnest, suggesting that lithospheric thinning influenced the locus and volume of magmatism. The limited distribution of lower crustal intrusions implies modest total CAMP volumes of 85,000 to 169,000 km3 beneath the South Georgia Rift, consistent with moderately elevated mantle potential temperatures (〈1500 °C). These results suggest that CAMP magmatism in the South Georgia Rift is caused by syn-rift decompression melting of a warm, enriched mantle.
    Description: This project was funded by an NSF GRFP fellowship DGE 16-44869 and a grant from the National Science Foundation’s Division of Earth Sciences (NSF-EAR) EarthScope program through the collaborative awards EAR-1144534/−1144829/−1144391. Data collection was made possible with help from IRIS PASSCAL, the University of Texas El Paso Seismic Source Facility, the teams of students who deployed and recovered geophones, and the support of landowners and county and state officials. We thank Alistair Harding for the VMTomo code, Nathan Miller for the PyVM toolbox, and William Wilcock for maintaining the Upicker package to pick arrivals.
    Repository Name: Woods Hole Open Access Server
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  • 92
    Publication Date: 2022-05-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Domeignoz-Horta, L. A., Pold, G., Liu, X. A., Frey, S. D., Melillo, J. M., & DeAngelis, K. M. Microbial diversity drives carbon use efficiency in a model soil. Nature Communications, 11(1), (2020): 3684, doi:10.1038/s41467-020-17502-z.
    Description: Empirical evidence for the response of soil carbon cycling to the combined effects of warming, drought and diversity loss is scarce. Microbial carbon use efficiency (CUE) plays a central role in regulating the flow of carbon through soil, yet how biotic and abiotic factors interact to drive it remains unclear. Here, we combine distinct community inocula (a biotic factor) with different temperature and moisture conditions (abiotic factors) to manipulate microbial diversity and community structure within a model soil. While community composition and diversity are the strongest predictors of CUE, abiotic factors modulated the relationship between diversity and CUE, with CUE being positively correlated with bacterial diversity only under high moisture. Altogether these results indicate that the diversity × ecosystem-function relationship can be impaired under non-favorable conditions in soils, and that to understand changes in soil C cycling we need to account for the multiple facets of global changes.
    Description: Funding for this project was provided by the Department of Energy grant DE-SC0016590 to K.M.D. and S.D.F., and an American Association of University Women Dissertation fellowship to G.P. We would also like to thank Stuart Grandy and Kevin Geyer for the fruitful discussions and Mary Waters, Courtney Bly and Ana Horta for their help with samples processing.
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  • 93
    Publication Date: 2022-05-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Tao, C., Seyfried, W. E., Jr., Lowell, R. P., Liu, Y., Liang, J., Guo, Z., Ding, K., Zhang, H., Liu, J., Qiu, L., Egorov, I., Liao, S., Zhao, M., Zhou, J., Deng, X., Li, H., Wang, H., Cai, W., Zhang, G., Zhou, H., Lin, J., & Li, W. Deep high-temperature hydrothermal circulation in a detachment faulting system on the ultra-slow spreading ridge. Nature Communications, 11(1), (2020): 1300, doi:10.1038/s41467-020-15062-w.
    Description: Coupled magmatic and tectonic activity plays an important role in high-temperature hydrothermal circulation at mid-ocean ridges. The circulation patterns for such systems have been elucidated by microearthquakes and geochemical data over a broad spectrum of spreading rates, but such data have not been generally available for ultra-slow spreading ridges. Here we report new geophysical and fluid geochemical data for high-temperature active hydrothermal venting at Dragon Horn area (49.7°E) on the Southwest Indian Ridge. Twin detachment faults penetrating to the depth of 13 ± 2 km below the seafloor were identified based on the microearthquakes. The geochemical composition of the hydrothermal fluids suggests a long reaction path involving both mafic and ultramafic lithologies. Combined with numerical simulations, our results demonstrate that these hydrothermal fluids could circulate ~ 6 km deeper than the Moho boundary and to much greater depths than those at Trans-Atlantic Geotraverse and Logachev-1 hydrothermal fields on the Mid-Atlantic Ridge.
    Description: This work was supported by National Key R&D Program of China under contract no. 2018YFC0309901, 2017YFC0306603, 2017YFC0306803, and 2017YFC0306203, COMRA Major Project under contract No. DY135-S1-01-01 and No. DY135-S1-01-06.
    Repository Name: Woods Hole Open Access Server
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  • 94
    Publication Date: 2022-05-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Vallecillo-Viejo, I. C., Liscovitch-Brauer, N., Diaz Quiroz, J. F., Montiel-Gonzalez, Maria F., Nemes, Sonya E., Rangan, K. J., Levinson, S. R., Eisenberg, E., & Rosenthal, J. J. C. Spatially regulated editing of genetic information within a neuron. Nucleic Acids Research, (2020): gkaa172, doi: 10.1093/nar/gkaa172.
    Description: In eukaryotic cells, with the exception of the specialized genomes of mitochondria and plastids, all genetic information is sequestered within the nucleus. This arrangement imposes constraints on how the information can be tailored for different cellular regions, particularly in cells with complex morphologies like neurons. Although messenger RNAs (mRNAs), and the proteins that they encode, can be differentially sorted between cellular regions, the information itself does not change. RNA editing by adenosine deamination can alter the genome’s blueprint by recoding mRNAs; however, this process too is thought to be restricted to the nucleus. In this work, we show that ADAR2 (adenosine deaminase that acts on RNA), an RNA editing enzyme, is expressed outside of the nucleus in squid neurons. Furthermore, purified axoplasm exhibits adenosine-to-inosine activity and can specifically edit adenosines in a known substrate. Finally, a transcriptome-wide analysis of RNA editing reveals that tens of thousands of editing sites (〉70% of all sites) are edited more extensively in the squid giant axon than in its cell bodies. These results indicate that within a neuron RNA editing can recode genetic information in a region-specific manner.
    Description: National Science Foundation (NSF) [IOS1557748 to J.R.]; United States–Israel Binational Science Foundation [BSF2013094 to J.R. and E.E.]; The Grass Foundation grant in support of the Doryteuthis pealeii Genome Project, and a gift by Mr. Edward Owens. Funding for open access charge: United States–Israel Binational Science Foundation [BSF2013094].
    Repository Name: Woods Hole Open Access Server
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  • 95
    Publication Date: 2022-05-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Bajnai, D., Guo, W., Spötl, C., Coplen, T. B., Methner, K., Löffler, N., Krsnik, E., Gischler, E., Hansen, M., Henkel, D., Price, G. D., Raddatz, J., Scholz, D., & Fiebig, J. Dual clumped isotope thermometry resolves kinetic biases in carbonate formation temperatures. Nature Communications, 11(1), (2020): 4005, doi:10.1038/s41467-020-17501-0.
    Description: Surface temperature is a fundamental parameter of Earth’s climate. Its evolution through time is commonly reconstructed using the oxygen isotope and the clumped isotope compositions of carbonate archives. However, reaction kinetics involved in the precipitation of carbonates can introduce inaccuracies in the derived temperatures. Here, we show that dual clumped isotope analyses, i.e., simultaneous ∆47 and ∆48 measurements on the single carbonate phase, can identify the origin and quantify the extent of these kinetic biases. Our results verify theoretical predictions and evidence that the isotopic disequilibrium commonly observed in speleothems and scleractinian coral skeletons is inherited from the dissolved inorganic carbon pool of their parent solutions. Further, we show that dual clumped isotope thermometry can achieve reliable palaeotemperature reconstructions, devoid of kinetic bias. Analysis of a belemnite rostrum implies that it precipitated near isotopic equilibrium and confirms the warmer-than-present temperatures during the Early Cretaceous at southern high latitudes.
    Description: This work became possible through DFG grant “INST 161/871-1” and the Investment in Science Fund at Woods Hole Oceanographic Institution. The authors would like to thank Sven Hofmann and Manuel Schumann for their assistance in the joint Goethe University – Senckenberg BiK-F Stable Isotope Facility at the Institute of Geosciences, Goethe University Frankfurt. K.M. acknowledges funding through “DFG ME 4955/1-1”, E.K. through “DFG MU 2845/6-1”, D.S. through “DFG SCHO 1274/8-1” and “DFG SCHO 1274/11-1”, and M.H. through “DFG HA 8694/1-1”. C.S. acknowledges funding from the University of Innsbruck. A review of the manuscript by David Evans on behalf of the USGS is acknowledged.
    Repository Name: Woods Hole Open Access Server
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  • 96
    Publication Date: 2022-05-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Rodysill, J. R., Donnelly, J. P., Sullivan, R., Lane, P. D., Toomey, M., Woodruff, J. D., Hawkes, A. D., MacDonald, D., d'Entremont, N., McKeon, K., Wallace, E., & van Hengstum, P. J. Historically unprecedented Northern Gulf of Mexico hurricane activity from 650 to 1250 CE. Scientific Reports, 10(1), (2020): 19092. doi:10.1038/s41598-020-75874-0.
    Description: Hurricane Michael (2018) was the first Category 5 storm on record to make landfall on the Florida panhandle since at least 1851 CE (Common Era), and it resulted in the loss of 59 lives and $25 billion in damages across the southeastern U.S. This event placed a spotlight on recent intense (exceeding Category 4 or 5 on the Saffir-Simpson Hurricane Wind Scale) hurricane landfalls, prompting questions about the natural range in variability of hurricane activity that the instrumental record is too short to address. Of particular interest is determining whether the frequency of recent intense hurricane landfalls in the northern Gulf of Mexico (GOM) is within or outside the natural range of intense hurricane activity prior to 1851 CE. In this study, we identify intense hurricane landfalls in northwest Florida during the past 2000 years based on coarse anomaly event detection from two coastal lacustrine sediment archives. We identified a historically unprecedented period of heightened storm activity common to four Florida panhandle localities from 650 to 1250 CE and a shift to a relatively quiescent storm climate in the GOM spanning the past six centuries. Our study provides long-term context for events like Hurricane Michael and suggests that the observational period 1851 CE to present may underrepresent the natural range in landfalling hurricane activity.
    Description: Funding for this project was provided by the Strategic Environmental Research and Development Program (SERDP) grant and NSF awards 0903020, 1902463, and 1854980 awarded to Jeffrey Donnelly, and the USGS Land Change Science Program.
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  • 97
    Publication Date: 2022-05-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Kennedy, E. B. L., Buresch, K. C., Boinapally, P., & Hanlon, R. T. Octopus arms exhibit exceptional flexibility. Scientific Reports, 10(1), (2020): 20872. doi:10.1038/s41598-020-77873-7.
    Description: The octopus arm is often referred to as one of the most flexible limbs in nature, yet this assumption requires detailed inspection given that this has not been measured comprehensively for all portions of each arm. We investigated the diversity of arm deformations in Octopus bimaculoides with a frame-by-frame observational analysis of laboratory video footage in which animals were challenged with different tasks. Diverse movements in these hydrostatic arms are produced by some combination of four basic deformations: bending (orally, aborally; inward, outward), torsion (clockwise, counter-clockwise), elongation, and shortening. More than 16,500 arm deformations were observed in 120 min of video. Results showed that all eight arms were capable of all four types of deformation along their lengths and in all directions. Arms function primarily to bring the sucker-lined oral surface in contact with target surfaces. Bending was the most common deformation observed, although the proximal third of the arms performed relatively less bending and more shortening and elongation as compared with other arm regions. These findings demonstrate the exceptional flexibility of the octopus arm and provide a basis for investigating motor control of the entire arm, which may aid the future development of soft robotics.
    Description: We gratefully acknowledge funding from Grant N00014-19-1-2445 from the Office of Naval Research, Tom McKenna and Marc Steinberg, Program Managers. We also thank the staff of the Marine Resources Center at MBL for assistance with water quality measurements, seawater system maintenance, and collection of food items for octopuses.
    Repository Name: Woods Hole Open Access Server
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  • 98
    Publication Date: 2022-05-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Naert, T., Tulkens, D., Edwards, N. A., Carron, M., Shaidani, N. I., Wlizla, M., Boel, A., Demuynck, S., Horb, M. E., Coucke, P., Willaert, A., Zorn, A. M., & Vleminckx, K. Maximizing CRISPR/Cas9 phenotype penetrance applying predictive modeling of editing outcomes in Xenopus and zebrafish embryos. Scientific Reports, 10(1), (2020): 14662, doi:10.1038/s41598-020-71412-0.
    Description: CRISPR/Cas9 genome editing has revolutionized functional genomics in vertebrates. However, CRISPR/Cas9 edited F0 animals too often demonstrate variable phenotypic penetrance due to the mosaic nature of editing outcomes after double strand break (DSB) repair. Even with high efficiency levels of genome editing, phenotypes may be obscured by proportional presence of in-frame mutations that still produce functional protein. Recently, studies in cell culture systems have shown that the nature of CRISPR/Cas9-mediated mutations can be dependent on local sequence context and can be predicted by computational methods. Here, we demonstrate that similar approaches can be used to forecast CRISPR/Cas9 gene editing outcomes in Xenopus tropicalis, Xenopus laevis, and zebrafish. We show that a publicly available neural network previously trained in mouse embryonic stem cell cultures (InDelphi-mESC) is able to accurately predict CRISPR/Cas9 gene editing outcomes in early vertebrate embryos. Our observations can have direct implications for experiment design, allowing the selection of guide RNAs with predicted repair outcome signatures enriched towards frameshift mutations, allowing maximization of CRISPR/Cas9 phenotype penetrance in the F0 generation.
    Description: Research in the Vleminckx laboratory is supported by the Research Foundation—Flanders (FWO-Vlaanderen) (Grants G0A1515N and G029413N), by the Belgian Science Policy (Interuniversity Attraction Poles—IAP7/07) and by the Concerted Research Actions from Ghent University (BOF15/GOA/011). Further support was obtained by the Hercules Foundation, Flanders (Grant AUGE/11/14) and the Desmoid Tumor Research Foundation and the Desmoid Tumour Foundation Canada. T.N. is funded by “Kom op tegen Kanker” (Stand up to Cancer), the Flemish cancer society and previously held PhD fellowship with VLAIO-HERMES during the course of this work. D.T. and M. C. hold a PhD fellowship from the Research Foundation-Flanders (FWO-Vlaanderen). The Zorn Lab is supported by Funding from NIH National Institute of Child Health and Human Development (NICHD) P01 HD093363. A.W. and A.B. are supported by the Ghent University (Universiteit Gent) Methusalem grant BOFMET2015000401 to Anne De Paepe. The National Xenopus Resource and Horb lab is supported by funding from the National Institutes of Health (P40 OD010997 and R01 HD084409).
    Repository Name: Woods Hole Open Access Server
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  • 99
    Publication Date: 2022-05-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Boissin, E., Neglia, V., Baksay, S., Micu, D., Bat, L., Topaloglu, B., Todorova, V., Panayotova, M., Kruschel, C., Milchakova, N., Voutsinas, E., Beqiraj, S., Nasto, I., Aglieri, G., Taviani, M., Zane, L., & Planes, S. Chaotic genetic structure and past demographic expansion of the invasive gastropod Tritia neritea in its native range, the Mediterranean Sea. Scientific Reports, 10(1), (2020): 21624. doi:10.1038/s41598-020-77742-3.
    Description: To better predict population evolution of invasive species in introduced areas it is critical to identify and understand the mechanisms driving genetic diversity and structure in their native range. Here, we combined analyses of the mitochondrial COI gene and 11 microsatellite markers to investigate both past demographic history and contemporaneous genetic structure in the native area of the gastropod Tritia neritea, using Bayesian skyline plots (BSP), multivariate analyses and Bayesian clustering. The BSP framework revealed population expansions, dated after the last glacial maximum. The haplotype network revealed a strong geographic clustering. Multivariate analyses and Bayesian clustering highlighted the strong genetic structure at all scales, between the Black Sea and the Adriatic Sea, but also within basins. Within basins, a random pattern of genetic patchiness was observed, suggesting a superimposition of processes involving natural biological effects (no larval phase and thus limited larval dispersal) and putative anthropogenic transport of specimens. Contrary to the introduced area, no isolation-by-distance patterns were recovered in the Mediterranean or the Black Seas, highlighting different mechanisms at play on both native and introduced areas, triggering unknown consequences for species’ evolutionary trajectories. These results of Tritia neritea populations on its native range highlight a mixture of ancient and recent processes, with the effects of paleoclimates and life history traits likely tangled with the effects of human-mediated dispersal.
    Description: This project was funded by the European FP7 CoCoNet project (Ocean.2011-4, grant agreement #287844) and we are grateful to the whole CoCoNET consortium. We are grateful to the following people for their critical help with logistics and field work ‘Antheus srl (Lecce, Italy)’; S Bevilacqua, G Guarnieri, S Fraschetti and T Terlizzi (University of Salento, Italy); L Angeletti and M Sigovini (ISMAR, Italy); D Shamrey (IBSS, Sevastopol); A Anastasopoulou, MA Pancucci-Papadopoulou and S Reizopoulou (HCMR, Greece) and E Hajdëri (Catholic University ‘Our Lady of Good Counsel’, Tirana). Thank you to J Almany for English corrections. This is ISMAR-CNR scientific contribution n1987. E Boissin was supported by a European Marie Curie postdoctoral fellowship MC-CIG-618480.
    Repository Name: Woods Hole Open Access Server
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  • 100
    Publication Date: 2022-05-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Liu, D., Ma, Q., Valiela, I., Anderson, D. M., Keesing, J. K., Gao, K., Zhen, Y., Sun, X., & Wang, Y. Role of C4 carbon fixation in Ulva prolifera, the macroalga responsible for the world's largest green tides. Communications Biology, 3(1), (2020): 494, doi:10.1038/s42003-020-01225-4.
    Description: Most marine algae preferentially assimilate CO2 via the Calvin-Benson Cycle (C3) and catalyze HCO3− dehydration via carbonic anhydrase (CA) as a CO2-compensatory mechanism, but certain species utilize the Hatch-Slack Cycle (C4) to enhance photosynthesis. The occurrence and importance of the C4 pathway remains uncertain, however. Here, we demonstrate that carbon fixation in Ulva prolifera, a species responsible for massive green tides, involves a combination of C3 and C4 pathways, and a CA-supported HCO3− mechanism. Analysis of CA and key C3 and C4 enzymes, and subsequent analysis of δ13C photosynthetic products showed that the species assimilates CO2 predominately via the C3 pathway, uses HCO3− via the CA mechanism at low CO2 levels, and takes advantage of high irradiance using the C4 pathway. This active and multi-faceted carbon acquisition strategy is advantageous for the formation of massive blooms, as thick floating mats are subject to intense surface irradiance and CO2 limitation.
    Description: This work was supported by the State Key Project of Research and Development Plan, Ministry of Science and Technology of the Peopleʼs Republic of China (2016YFC1402106). Support for D.M.A. provided by the Woods Hole Oceanographic Institution—Ocean University of China Cooperative Research Initiative. We thank Dr. Juntian Xu, Jing Ma, Ying Li, and Chenglong Ji for assisting culture experiments and sample analysis.
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