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  • 1
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    Pedogenic carbonates as a proxy for palaeo-CO2 in the Palaeozoic atmosphere (2010)
    Elsevier
    Details
    Publication Date: 2021-03-29
    Description: According to a model by Cerling (1991, 1999), the carbon isotope composition of calcretes should depend on the soil type and the CO2-concentration in the atmosphere. We have tested Cerling’s model by investigating 14 Palaeozoic sections with soil profiles. A large number of carbonate types of different genetic origin exist in the localities examined. Comparing the Palaeozoic samples with recent and subrecent calcretes, it can be demonstrated that anhedral, cryptocrystalline (〈10 μm) and subhedral microcrystalline (10 - 40 μm) carbonates are clearly of pedogenic origin. Crystals of larger size with a poikilotopic texture are of groundwater or burial diagenetic origin. Macro- and micromorphological features, typical of recent calcretes, occur in several soil profiles, but thin section microscopy reveals a strong diagenetic overprint of most pedogenic carbonates. Time equivalent sections with comparable soil types (protosols, calcisols and vertisols) show large variations in carbon isotope composition. On the other hand, different carbonate generations at one site do not differ much. Therefore Palaeozoic calcretes appear to be unsuitable for a deduction of the Palaeozoic CO2-concentration.
    Description: German Research Foundation (DFG)
    Description: research
    Keywords: 551.9 ; 552.5 ; VKB 350 ; VJJ 110 ; VCA 300 ; VKB 332 ; VKA 300 ; VKB 371 ; VEA 000 ; VKB 372 ; Lithogenese {Sedimentologie} ; Geochemie der Stabilen Isotopen ; Paläozoische Geologie ; Sedimentationsbedingungen ; Petrogenese ; Klastische Sedimentgesteine ; Europa insgesamt {Geologie} ; Karbonatische Sedimentgesteine ; Kohlenstoffkreislauf ; C-isotope ; Jungpaläozoikum ; Paläopedologie ; Kalkkruste ; CO2 ; calcrete ; carbon cycle ; upper Paleozoic ; paleosol ; C-13/C-12 ; Europa ; paläoklima ; Europe ; 38.41 ; 38.61 ; 38.32
    Language: English
    Type: article
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  • 2
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    Crystal diffraction prediction and partiality estimation using Gaussian basis functions (2023)
    International Union of Crystallography | 5 Abbey Square, Chester, Cheshire CH1 2HU, England
    Details
    Publication Date: 2023-07-04
    Description: The recent diversification of macromolecular crystallographic experiments including the use of pink beams, convergent electron diffraction and serial snapshot crystallography has shown the limitations of using the Laue equations for diffraction prediction. This article gives a computationally efficient way of calculating approximate crystal diffraction patterns given varying distributions of the incoming beam, crystal shapes and other potentially hidden parameters. This approach models each pixel of a diffraction pattern and improves data processing of integrated peak intensities by enabling the correction of partially recorded reflections. The fundamental idea is to express the distributions as weighted sums of Gaussian functions. The approach is demonstrated on serial femtosecond crystallography data sets, showing a significant decrease in the required number of patterns to refine a structure to a given error.
    Description: Reflection position, size and shape prediction and partiality estimation of crystal diffraction by integrating using a Gaussian basis are described.
    Keywords: ddc:548 ; partiality estimation ; diffraction prediction ; merging ; serial snapshot crystallography
    Language: English
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  • 3
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    In situ neutron diffraction for analysing complex coarse‐grained functional materials (2023)
    International Union of Crystallography | 5 Abbey Square, Chester, Cheshire CH1 2HU, England
    Details
    Publication Date: 2023-10-24
    Description: 〈p xmlns:mml="http://www.w3.org/1998/Math/MathML" xml:lang="en"〉Complex functional materials play a crucial role in a broad range of energy‐related applications and in general for materials science. Revealing the structural mechanisms is challenging due to highly correlated coexisting phases and microstructures, especially for 〈italic〉in situ〈/italic〉 or 〈italic〉operando〈/italic〉 investigations. Since the grain sizes influence the properties, these microstructural features further complicate investigations at synchrotrons due to the limitations of illuminated sample volumes. In this study, it is demonstrated that such complex functional materials with highly correlated coexisting phases can be investigated under 〈italic〉in situ〈/italic〉 conditions with neutron diffraction. For large grain sizes, these experiments are valuable methods to reveal the structural mechanisms. For an example of 〈italic〉in situ〈/italic〉 experiments on barium titanate with an applied electric field, details of the electric‐field‐induced phase transformation depending on grain size and frequency are revealed. The results uncover the strain mechanisms in barium titanate and elucidate the complex interplay of stresses in relation to grain sizes as well as domain‐wall densities and mobilities.〈/p〉
    Description: 〈p xmlns:mml="http://www.w3.org/1998/Math/MathML" xml:lang="en"〉This work reports 〈italic〉in situ〈/italic〉 neutron diffraction experiments on a broad range of grain sizes of barium titanate. The study reveals the grain‐size‐dependent strain mechanisms and shows the competitiveness of neutron diffraction with high‐resolution synchrotron diffraction.〈boxed-text position="anchor" content-type="graphic" xml:lang="en"〉〈graphic position="anchor" id="jats-graphic-1" xlink:href="urn:x-wiley:16005767:jcr2vb5054:jcr2vb5054-fig-0001"〉 〈alt-text〉image〈/alt-text〉 〈/graphic〉〈/boxed-text〉〈/p〉
    Keywords: ddc:550.724 ; ddc:548 ; neutron diffraction ; in situ ; applied electric fields ; barium titanate ; strain mechanisms ; grain sizes ; complex functional materials ; microstructures ; coexisting phases
    Language: English
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  • 4
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    Energy‐dispersive X‐ray stress analysis under geometric constraints: exploiting the material's inherent anisotropy (2023)
    International Union of Crystallography | 5 Abbey Square, Chester, Cheshire CH1 2HU, England
    Details
    Publication Date: 2023-09-12
    Description: Two data evaluation concepts for X‐ray stress analysis based on energy‐dispersive diffraction on polycrystalline materials with cubic crystal structure, almost random crystallographic texture and strong single‐crystal elastic anisotropy are subjected to comparative assessment. The aim is the study of the residual stress state in hard‐to‐reach measurement points, for which the sin2ψ method is not applicable due to beam shadowing at larger sample tilting. This makes the approaches attractive for stress analysis in engineering parts with complex shapes, for example. Both approaches are based on the assumption of a biaxial stress state within the irradiated sample volume. They exploit in different ways the elastic anisotropy of individual crystallites acting at the microscopic scale and the anisotropy imposed on the material by the near‐surface stress state at the macroscopic scale. They therefore complement each other, in terms of both their preconditions and their results. The first approach is based on the evaluation of strain differences, which makes it less sensitive to variations in the strain‐free lattice parameter a0. Since it assumes a homogeneous stress state within the irradiated sample volume, it provides an average value of the in‐plane stresses. The second approach exploits the sensitivity of the lattice strain to changes in a0. Consequently, it assumes a homogeneous chemical composition but provides a stress profile within the information depth. Experimental examples from different fields in materials science, namely shot peening of austenitic steel and in situ stress analysis during welding, are presented to demonstrate the suitability of the proposed methods.
    Description: The single‐crystal elastic anisotropy and the anisotropy of the near‐surface (residual) stress state of polycrystalline materials with random texture are exploited in energy‐dispersive X‐ray stress analysis to study samples under constrained measurement conditions.
    Keywords: ddc:548 ; X‐ray stress analysis ; energy‐dispersive diffraction ; polycrystalline materials ; single‐crystal elastic anisotropy
    Language: English
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  • 5
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    Use of electron backscatter diffraction patterns to determine the crystal lattice. Part 3. Pseudosymmetry (2023)
    International Union of Crystallography | 5 Abbey Square, Chester, Cheshire CH1 2HU, England
    Details
    Publication Date: 2023-07-20
    Description: A pseudosymmetric description of the crystal lattice derived from a single wide‐angle Kikuchi pattern can have several causes. The small size (〈15%) of the sector covered by an electron backscatter diffraction pattern, the limited precision of the projection centre position and the Kikuchi band definition are crucial. Inherent pseudosymmetries of the crystal lattice and/or structure also pose a challenge in the analysis of Kikuchi patterns. To eliminate experimental errors as much as possible, simulated Kikuchi patterns of 350 phases have been analysed using the software CALM [Nolze et al. (2021). J. Appl. Cryst.54, 1012–1022] in order to estimate the frequency of and reasons for pseudosymmetric crystal lattice descriptions. Misinterpretations occur in particular when the atomic scattering factors of non‐equivalent positions are too similar and reciprocal‐lattice points are systematically missing. As an example, a pseudosymmetry prediction depending on the elements involved is discussed for binary AB compounds with B1 and B2 structure types. However, since this is impossible for more complicated phases, this approach cannot be directly applied to compounds of arbitrary composition and structure.
    Description: Distinguishing between actual and apparent pseudosymmetry in electron backscatter diffraction patterns is nearly impossible, even for simulated patterns. However, the resulting lattice is always a superlattice as long as the signal is not a superposition of multiple patterns.
    Keywords: ddc:548 ; Bravais lattices ; pseudosymmetry ; lattice point density ; ordered/disordered structures ; lattice distortion ; electron backscatter diffraction ; backscattered Kikuchi diffraction patterns ; lattice parameters ; Funk transform
    Language: English
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  • 6
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    Use of electron backscatter diffraction patterns to determine the crystal lattice. Part 2. Offset corrections (2023)
    International Union of Crystallography | 5 Abbey Square, Chester, Cheshire CH1 2HU, England
    Details
    Publication Date: 2023-07-21
    Description: A band width determination using the first derivative of the band profile systematically underestimates the true Bragg angle. Corrections are proposed to compensate for the resulting offset Δa/a of the mean lattice parameters derived from as many Kikuchi band widths as possible. For dynamically simulated Kikuchi patterns, Δa/a can reach up to 8% for phases with a high mean atomic number Z, whereas for much more common low‐Z materials the offset decreases linearly. A predicted offset Δa/a = f(Z) is therefore proposed, which also includes the unit‐cell volume and thus takes into account the packing density of the scatterers in the material. Since Z is not always available for unknown phases, its substitution by Zmax, i.e. the atomic number of the heaviest element in the compound, is still acceptable for an approximate correction. For simulated Kikuchi patterns the offset‐corrected lattice parameter deviation is Δa/a 〈 1.5%. The lattice parameter ratios, and the angles α, β and γ between the basis vectors, are not affected at all.
    Description: Automatically determined band widths in simulated backscatter Kikuchi patterns exhibit differences from the double Bragg angles that correlate with the scatterer density. Corrections are proposed to compensate for this.
    Keywords: ddc:548 ; mean atomic number ; Kikuchi patterns ; lattice parameters ; automated Bragg angle determination ; lattice parameter determination ; dynamical theory of electron diffraction ; electron backscatter diffraction ; Funk transform
    Language: English
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  • 7
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    POWTEX visits POWGEN (2023)
    International Union of Crystallography | 5 Abbey Square, Chester, Cheshire CH1 2HU, England
    Details
    Publication Date: 2023-07-21
    Description: 〈p xmlns:mml="http://www.w3.org/1998/Math/MathML" xml:lang="en"〉The high‐intensity time‐of‐flight (TOF) neutron diffractometer POWTEX for powder and texture analysis is currently being built prior to operation in the eastern guide hall of the research reactor FRM II at Garching close to Munich, Germany. Because of the world‐wide 〈sup〉3〈/sup〉He crisis in 2009, the authors promptly initiated the development of 〈sup〉3〈/sup〉He‐free detector alternatives that are tailor‐made for the requirements of large‐area diffractometers. Herein is reported the 2017 enterprise to operate one mounting unit of the final POWTEX detector on the neutron powder diffractometer POWGEN at the Spallation Neutron Source located at Oak Ridge National Laboratory, USA. As a result, presented here are the first angular‐ and wavelength‐dependent data from the POWTEX detector, unfortunately damaged by a 50〈italic〉g〈/italic〉 shock but still operating, as well as the efforts made both to characterize the transport damage and to successfully recalibrate the voxel positions in order to yield nonetheless reliable measurements. Also described is the current data reduction process using the 〈italic〉PowderReduceP2D〈/italic〉 algorithm implemented in 〈italic〉Mantid〈/italic〉 [Arnold 〈italic〉et al.〈/italic〉 (2014). 〈italic〉Nucl. Instrum. Methods Phys. Res. A〈/italic〉, 〈bold〉764〈/bold〉, 156–166]. The final part of the data treatment chain, namely a novel multi‐dimensional refinement using a modified version of the 〈italic〉GSAS‐II〈/italic〉 software suite [〈ext-link ext-link-type="uri" xlink:href="http://scripts.iucr.org/cgi-bin/paper?aj5212"〉Toby & Von Dreele (2013). 〈italic〉J. Appl. Cryst.〈/italic〉〈bold〉46〈/bold〉, 544–549〈/ext-link〉], is compared with a standard data treatment of the same event data conventionally reduced as TOF diffraction patterns and refined with the unmodified version of 〈italic〉GSAS‐II〈/italic〉. This involves both determining the instrumental resolution parameters using POWGEN's powdered diamond standard sample and the refinement of a friendly‐user sample, BaZn(NCN)〈sub〉2〈/sub〉. Although each structural parameter on its own looks similar upon comparing the conventional (1D) and multi‐dimensional (2D) treatments, also in terms of precision, a closer view shows small but possibly significant differences. For example, the somewhat suspicious proximity of the 〈italic〉a〈/italic〉 and 〈italic〉b〈/italic〉 lattice parameters of BaZn(NCN)〈sub〉2〈/sub〉 crystallizing in 〈italic〉Pbca〈/italic〉 as resulting from the 1D refinement (0.008 Å) is five times less pronounced in the 2D refinement (0.038 Å). Similar features are found when comparing bond lengths and bond angles, 〈italic〉e.g.〈/italic〉 the two N—C—N units are less differently bent in the 1D results (173 and 175°) than in the 2D results (167 and 173°). The results are of importance not only for POWTEX but also for other neutron TOF diffractometers with large‐area detectors, like POWGEN at the SNS or the future DREAM beamline at the European Spallation Source.〈/p〉
    Description: 〈p xmlns:mml="http://www.w3.org/1998/Math/MathML" xml:lang="en"〉The first real‐world neutron diffraction data have been collected with one of the POWTEX detectors (FRM II, Garching, Germany) mounted for testing at the Spallation Neutron Source (Oak Ridge National Laboratory, USA). They allow for angular‐ and wavelength‐dispersive Rietveld refinement using a modified version of 〈italic〉GSAS‐II〈/italic〉.〈boxed-text position="anchor" content-type="graphic" xml:lang="en"〉〈graphic position="anchor" id="jats-graphic-1" xlink:href="urn:x-wiley:16005767:jcr2tu5033:jcr2tu5033-fig-0001"〉 〈/graphic〉〈/boxed-text〉〈/p〉
    Keywords: ddc:548 ; neutron detectors ; POWGEN beamline ; POWTEX detector ; DREAM beamline ; time‐of‐flight diffraction ; angular‐dispersive refinement ; wavelength‐dispersive refinement ; powder diffraction ; Rietveld refinement ; multi‐dimensional refinement
    Language: English
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  • 8
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    A note on the wedge reversion antisymmetry operation and 51 types of physical quantities in arbitrary dimensions (2023)
    International Union of Crystallography | 5 Abbey Square, Chester, Cheshire CH1 2HU, England
    Details
    Publication Date: 2023-07-21
    Description: 〈p xmlns:mml="http://www.w3.org/1998/Math/MathML" xml:lang="en"〉The paper by Gopalan [〈ext-link ext-link-type="uri" xlink:href="http://scripts.iucr.org/cgi-bin/paper?ib5086"〉(2020). 〈italic〉Acta Cryst.〈/italic〉 A〈bold〉76〈/bold〉, 318–327〈/ext-link〉] presented an enumeration of the 41 physical quantity types in non‐relativistic physics, in arbitrary dimensions, based on the formalism of Clifford algebra. Gopalan considered three antisymmetries: spatial inversion, 〈overline〉1〈/overline〉, time reversal, 1′, and wedge reversion, 1〈sup〉†〈/sup〉. A consideration of the set of all seven antisymmetries (〈overline〉1〈/overline〉, 1′, 1〈sup〉†〈/sup〉, 1′〈sup〉†〈/sup〉, 〈overline〉1〈/overline〉〈sup〉†〈/sup〉, 〈overline〉1〈/overline〉′, 〈overline〉1〈/overline〉′〈sup〉†〈/sup〉) leads to an extension of the results obtained by Gopalan. It is shown that there are 51 types of physical quantities with distinct symmetry properties in total.〈/p〉
    Description: 〈p xmlns:mml="http://www.w3.org/1998/Math/MathML" xml:lang="en"〉It is shown that there are 51 types of physical quantities in arbitrary dimensions with distinct transformations by wedge reversion symmetry. In the paper by 〈ext-link ext-link-type="uri" xlink:href="http://scripts.iucr.org/cgi-bin/paper?ib5086"〉Gopalan [(2020). 〈italic〉Acta Cryst.〈/italic〉 A〈bold〉76〈/bold〉, 318–327]〈/ext-link〉 only 41 types were enumerated.〈boxed-text position="anchor" content-type="graphic" xml:lang="en"〉〈graphic position="anchor" id="jats-graphic-1" xlink:href="urn:x-wiley:20532733:aya2ib5117:aya2ib5117-fig-0001"〉 〈alt-text〉image〈/alt-text〉 〈/graphic〉〈/boxed-text〉〈/p〉
    Keywords: ddc:548 ; multivectors ; wedge reversion ; antisymmetry ; Clifford algebra
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  • 9
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    Use of electron backscatter diffraction patterns to determine the crystal lattice. Part 1. Where is the Bragg angle? (2023)
    International Union of Crystallography | 5 Abbey Square, Chester, Cheshire CH1 2HU, England
    Details
    Publication Date: 2023-07-19
    Description: The derivation of a crystal structure and its phase‐specific parameters from a single wide‐angle backscattered Kikuchi diffraction pattern requires reliable extraction of the Bragg angles. By means of the first derivative of the lattice profile, an attempt is made to determine fully automatically and reproducibly the band widths in simulated Kikuchi patterns. Even under such ideal conditions (projection centre, wavelength and lattice plane traces are perfectly known), this leads to a lattice parameter distribution whose mean shows a linear offset that correlates with the mean atomic number Z of the pattern‐forming phase. The consideration of as many Kikuchi bands as possible reduces the errors that typically occur if only a single band is analysed. On the other hand, the width of the resulting distribution is such that higher image resolution of diffraction patterns, employing longer wavelengths to produce wider bands or the use of higher interference orders is less advantageous than commonly assumed.
    Description: The lattice parameters of more than 350 phases have been determined from simulated backscatter Kikuchi patterns. The deviations correlating with the mean atomic number correspond to those observed previously for experimental electron backscatter diffraction patterns.
    Keywords: ddc:548 ; Bragg angles ; Kikuchi bands ; Kikuchi patterns ; first derivative ; lattice parameters ; lattice parameter determination ; Bravais lattice type ; electron backscatter diffraction ; Radon transform
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  • 10
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    Data reduction for X‐ray serial crystallography using machine learning (2023)
    International Union of Crystallography | 5 Abbey Square, Chester, Cheshire CH1 2HU, England
    Details
    Publication Date: 2023-07-19
    Description: Serial crystallography experiments produce massive amounts of experimental data. Yet in spite of these large‐scale data sets, only a small percentage of the data are useful for downstream analysis. Thus, it is essential to differentiate reliably between acceptable data (hits) and unacceptable data (misses). To this end, a novel pipeline is proposed to categorize the data, which extracts features from the images, summarizes these features with the `bag of visual words' method and then classifies the images using machine learning. In addition, a novel study of various feature extractors and machine learning classifiers is presented, with the aim of finding the best feature extractor and machine learning classifier for serial crystallography data. The study reveals that the oriented FAST and rotated BRIEF (ORB) feature extractor with a multilayer perceptron classifier gives the best results. Finally, the ORB feature extractor with multilayer perceptron is evaluated on various data sets including both synthetic and experimental data, demonstrating superior performance compared with other feature extractors and classifiers.
    Description: A machine learning method for distinguishing good and bad images in serial crystallography is presented. To reduce the computational cost, this uses the oriented FAST and rotated BRIEF feature extraction method from computer vision to detect image features, followed by a multilayer perceptron (neural network) to classify the images.
    Keywords: ddc:548 ; serial crystallography ; data reduction ; machine learning ; feature extraction
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  • 11
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    Towards joint in situ determination of pressure and temperature in the large volume press exclusively from X‐ray diffraction (2023)
    International Union of Crystallography | 5 Abbey Square, Chester, Cheshire CH1 2HU, England
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    Publication Date: 2023-07-19
    Description: Since high‐pressure devices have been used at synchrotron facilities, accurate determination of pressure and temperature in the sample has been a crucial objective, particularly for experiments that simulate the Earth's interior. However, in some cases using a thermocouple may have a high likelihood of failure or is incompatible with a high‐pressure assembly. To address these challenges and similar issues, we aim to expand a previously proposed solution: to jointly estimate pressure and temperature (〈italic〉PT〈/italic〉) through 〈italic〉in situ〈/italic〉 X‐ray diffraction, to cover a wider range of internal 〈italic〉PT〈/italic〉 calibrants tested over larger 〈italic〉PT〈/italic〉 ranges. A modifiable Python‐based software is offered to quickly obtain results. To achieve these aims, 〈italic〉in situ〈/italic〉 large volume press experiments are performed on pellets of intimately mixed powders of a halide (NaCl, KCl, KBr, CsCl) or MgO and a metal (Pt, Re, Mo, W, Ni) in the pressure range 3–11 GPa and temperature range 300–1800 K. Although the pressure range was chosen for practical reasons, it also covers an equally important depth range in the Earth (down to 350 km) for geoscience studies. A thermocouple was used to validate the 〈italic〉PT〈/italic〉 conditions in the cell assemblies. The key results show that choosing the appropriate calibrant materials and using a joint 〈italic〉PT〈/italic〉 estimation can yield surprisingly small uncertainties (〈italic〉i.e.〈/italic〉 〈±0.1 GPa and 〈±50 K). This development is expected to benefit current and future research at extreme conditions, as other materials with high compressibility or high thermal pressure, stable over large 〈italic〉PT〈/italic〉 ranges, may be discovered and used as 〈italic〉PT〈/italic〉 calibrants.〈/p〉
    Description: Research in high‐pressure devices, such as the diamond anvil cell and the large volume press, requires knowledge of the pressure and temperature in the sample. Here, a large volume press and an internal resistive heater were used to generate high load and heat to various combinations of intimately mixed powders of materials. X‐ray diffraction and custom software were used to jointly estimate the pressures and temperatures in the samples and establish calibrants for 〈italic〉in situ〈/italic〉 experiments at extreme conditions.〈boxed-text position="anchor" content-type="graphic" xml:lang="en"〉〈graphic position="anchor" id="jats-graphic-1" xlink:href="urn:x-wiley:16005775:jsy2vl5008:jsy2vl5008-fig-0001"〉
    Description: https://gitlab.desy.de/robert.farla/eoscross
    Keywords: ddc:548 ; equations of state ; X‐ray diffraction ; large volume press ; high pressure ; resistive heating
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  • 12
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    Hard X‐ray full‐field nanoimaging using a direct photon‐counting detector (2023)
    Flenner, Silja ; Hagemann, Johannes ; Wittwer, Felix ; [et al.]
    International Union of Crystallography | 5 Abbey Square, Chester, Cheshire CH1 2HU, England
    Details
    Publication Date: 2024-03-05
    Description: Full‐field X‐ray nanoimaging is a widely used tool in a broad range of scientific areas. In particular, for low‐absorbing biological or medical samples, phase contrast methods have to be considered. Three well established phase contrast methods at the nanoscale are transmission X‐ray microscopy with Zernike phase contrast, near‐field holography and near‐field ptychography. The high spatial resolution, however, often comes with the drawback of a lower signal‐to‐noise ratio and significantly longer scan times, compared with microimaging. In order to tackle these challenges a single‐photon‐counting detector has been implemented at the nanoimaging endstation of the beamline P05 at PETRA III (DESY, Hamburg) operated by Helmholtz‐Zentrum Hereon. Thanks to the long sample‐to‐detector distance available, spatial resolutions of below 100 nm were reached in all three presented nanoimaging techniques. This work shows that a single‐photon‐counting detector in combination with a long sample‐to‐detector distance allows one to increase the time resolution for in situ nanoimaging, while keeping a high signal‐to‐noise level.
    Description: A direct photon‐counting detector was used for different nanoimaging phase contrast techniques, increasing the temporal resolution.
    Keywords: ddc:548 ; nanotomography ; full‐field X‐ray microscopy ; near‐field holography ; near‐field ptychography ; Zernike phase contrast ; single‐photon‐counting detector ; phase contrast
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  • 13
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    Machine learning for scattering data: strategies, perspectives and applications to surface scattering (2023)
    Hinderhofer, Alexander ; Greco, Alessandro ; Starostin, Vladimir ; [et al.]
    International Union of Crystallography | 5 Abbey Square, Chester, Cheshire CH1 2HU, England
    Details
    Publication Date: 2024-02-14
    Description: Machine learning (ML) has received enormous attention in science and beyond. Discussed here are the status, opportunities, challenges and limitations of ML as applied to X‐ray and neutron scattering techniques, with an emphasis on surface scattering. Typical strategies are outlined, as well as possible pitfalls. Applications to reflectometry and grazing‐incidence scattering are critically discussed. Comment is also given on the availability of training and test data for ML applications, such as neural networks, and a large reflectivity data set is provided as reference data for the community.
    Description: The status, opportunities, challenges and limitations of machine learning are discussed as applied to X‐ray and neutron scattering techniques, with an emphasis on surface scattering.
    Keywords: ddc:548 ; surface scattering ; X‐ray diffraction ; neutron scattering ; machine learning ; data analysis
    Language: English
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  • 14
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    Beam‐induced redox chemistry in iron oxide nanoparticle dispersions at ESRF–EBS (2023)
    International Union of Crystallography | 5 Abbey Square, Chester, Cheshire CH1 2HU, England
    Details
    Publication Date: 2024-02-21
    Description: The storage ring upgrade of the European Synchrotron Radiation Facility makes ESRF–EBS the most brilliant high‐energy fourth‐generation light source, enabling in situ studies with unprecedented time resolution. While radiation damage is commonly associated with degradation of organic matter such as ionic liquids or polymers in the synchrotron beam, this study clearly shows that highly brilliant X‐ray beams readily induce structural changes and beam damage in inorganic matter, too. Here, the reduction of Fe3+ to Fe2+ in iron oxide nanoparticles by radicals in the brilliant ESRF–EBS beam, not observed before the upgrade, is reported. Radicals are created due to radiolysis of an EtOH–H2O mixture with low EtOH concentration (∼6 vol%). In light of extended irradiation times during insitu experiments in, for example, battery and catalysis research, beam‐induced redox chemistry needs to be understood for proper interpretation of insitu data.
    Description: With the increased brilliance at the European Research Facility–Extremely Brilliant Source (ESRF–EBS), a beam‐induced reduction of non‐stochiometric iron oxide nanoparticles (almost maghemite composition) to magnetite was observed in a mixture of ethanol and water with low ethanol concentration.
    Keywords: ddc:548 ; beam‐induced radiolysis ; radiation damage on inorganic materials ; ESRF–EBS
    Language: English
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  • 15
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    Toward an adequate level of detail in flood risk assessments (2023)
    Blackwell Publishing Ltd | Oxford, UK
    Details
    Publication Date: 2024-01-24
    Description: 〈title xmlns:mml="http://www.w3.org/1998/Math/MathML"〉Abstract〈/title〉〈p xmlns:mml="http://www.w3.org/1998/Math/MathML" xml:lang="en"〉Flood risk assessments require different disciplines to understand and model the underlying components hazard, exposure, and vulnerability. Many methods and data sets have been refined considerably to cover more details of spatial, temporal, or process information. We compile case studies indicating that refined methods and data have a considerable effect on the overall assessment of flood risk. But are these improvements worth the effort? The adequate level of detail is typically unknown and prioritization of improvements in a specific component is hampered by the lack of an overarching view on flood risk. Consequently, creating the dilemma of potentially being too greedy or too wasteful with the resources available for a risk assessment. A “sweet spot” between those two would use methods and data sets that cover all relevant known processes without using resources inefficiently. We provide three key questions as a qualitative guidance toward this “sweet spot.” For quantitative decision support, more overarching case studies in various contexts are needed to reveal the sensitivity of the overall flood risk to individual components. This could also support the anticipation of unforeseen events like the flood event in Germany and Belgium in 2021 and increase the reliability of flood risk assessments.〈/p〉
    Description: Deutsche Forschungsgemeinschaft http://dx.doi.org/10.13039/501100001659
    Description: BMBF http://dx.doi.org/10.13039/501100002347
    Description: Federal Environment Agency http://dx.doi.org/10.13039/501100010809
    Description: http://howas21.gfz-potsdam.de/howas21/
    Description: https://www.umwelt.niedersachsen.de/startseite/themen/wasser/hochwasser_amp_kustenschutz/hochwasserrisikomanagement_richtlinie/hochwassergefahren_und_hochwasserrisikokarten/hochwasserkarten-121920.html
    Description: https://download.geofabrik.de/europe/germany.html
    Description: https://emergency.copernicus.eu/mapping/list-of-components/EMSN024
    Description: https://data.jrc.ec.europa.eu/collection/id-0054
    Description: https://oasishub.co/dataset/surface-water-flooding-footprinthurricane-harvey-august-2017-jba
    Description: https://www.wasser.sachsen.de/hochwassergefahrenkarte-11915.html
    Keywords: ddc:551.48 ; decision support ; extreme events ; integrated flood risk management ; risk assessment
    Language: English
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  • 16
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    Small lateral air pressure gradients generated by a large chamber system have a strong effect on CO2 transport in soil (2023)
    Blackwell Publishing Ltd | Oxford, UK
    Details
    Publication Date: 2024-02-09
    Description: 〈title xmlns:mml="http://www.w3.org/1998/Math/MathML"〉Abstract〈/title〉〈p xmlns:mml="http://www.w3.org/1998/Math/MathML" xml:lang="en"〉Gas transport in soils is usually assumed to be purely diffusive, although several studies have shown that non‐diffusive processes can significantly enhance soil gas transport. These processes include barometric air pressure changes, wind‐induced pressure pumping and static air pressure fields generated by wind interacting with obstacles. The associated pressure gradients in the soil can cause advective gas fluxes that are much larger than diffusive fluxes. However, the contributions of the respective transport processes are difficult to separate. We developed a large chamber system to simulate pressure fields and investigate their influence on soil gas transport. The chamber consists of four subspaces in which pressure is regulated by fans that blow air in or out of the chamber. With this setup, we conducted experiments with oscillating and static pressure fields. CO〈sub〉2〈/sub〉 concentrations were measured along two soil profiles beneath the chamber. We found a significant relationship between static lateral pressure gradients and the change in the CO〈sub〉2〈/sub〉 profiles (R〈sup〉2〈/sup〉 = 0.53; 〈italic toggle="no"〉p〈/italic〉‐value 〈2e‐16). Even small pressure gradients between −1 and 1 Pa relative to ambient pressure resulted in an increase or decrease in CO〈sub〉2〈/sub〉 concentrations of 8% on average in the upper soil, indicating advective flow of air in the pore space. Positive pressure gradients resulted in decreasing, negative pressure gradients in increasing CO〈sub〉2〈/sub〉 concentrations. The concentration changes were probably caused by an advective flow field in the soil beneath the chamber generated by the pressure gradients. No effect of oscillating pressure fields was observed in this study. The results indicate that static lateral pressure gradients have a substantial impact on soil gas transport and therefore are an important driver of gas exchange between soil and atmosphere. Lateral pressure gradients in a comparable range can be induced under windy conditions when wind interacts with terrain features. They can also be caused by chambers used for flux measurements at high wind speed or by fans used for head‐space mixing within the chambers, which yields biased flux estimates.〈/p〉
    Description: Deutsche Forschungsgemeinschaft http://dx.doi.org/10.13039/501100001659
    Keywords: ddc:631.4 ; advective flux ; chamber flux measurements ; static air pressure fields ; wind‐induced pressure pumping
    Language: English
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  • 17
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    Redoxtrons – An experimental system to study redox processes within the capillary fringe (2023)
    Blackwell Publishing Ltd | Oxford, UK
    Details
    Publication Date: 2023-11-18
    Description: Spatiotemporal characterisation of the soil redox status within the capillary fringe (CF) is a challenging task. Air‐filled porosities (ε), oxygen concentration (O〈sub〉2〈/sub〉) and soil redox potential (EH) are interrelated soil variables within active biogeochemical domains such as the CF. We investigated the impact of water table (WT) rise and drainage in an undisturbed topsoil and subsoil sample taken from a Calcaric Gleysol for a period of 46 days. We merged 1D (EH and matric potential) and 2D (O〈sub〉2〈/sub〉) systems to monitor at high spatiotemporal resolution redox dynamics within self‐constructed redoxtron housings and complemented the data set by a 3D pore network characterization using X‐ray microtomography (X‐ray μCT). Depletion of O〈sub〉2〈/sub〉 was faster in the organic matter‐ and clay‐rich aggregated topsoil and the CF extended 〉10 cm above the artificial WT. The homogeneous and less‐aggregated subsoil extended only 4 cm above the WT as indicated by ε–O〈sub〉2〈/sub〉–EH data during saturation. After drainage, 2D O〈sub〉2〈/sub〉 imaging revealed a fast aeration towards the lower depths of the topsoil, which agrees with the connected ε derived by X‐ray μCT (ε〈sub〉CT_conn〈/sub〉) of 14.9% of the total porosity. However, small‐scaled anoxic domains with O〈sub〉2〈/sub〉 saturation 〈5% were apparent even after lowering the WT (down to 0.25 cm〈sup〉2〈/sup〉 in size) for 23 days. These domains remained a nucleus for reducing soil conditions (E〈sub〉H〈/sub〉 〈 −100 mV), which made it challenging to characterise the soil redox status in the CF. In contrast, the subsoil aeration reached O〈sub〉2〈/sub〉 saturation after 8 days for the complete soil volume. Values of ε〈sub〉CT_conn〈/sub〉 around zero in the subsoil highlighted that soil aeration was independent of this parameter suggesting that other variables such as microbial activity must be considered when predicting the soil redox status from ε alone. The use of redoxtrons in combination with localised redox‐measurements and image based pore space analysis resulted in a better 2D/3D characterisation of the pore system and related O〈sub〉2〈/sub〉 transport properties. This allowed us to analyse the distribution and activity of microbiological niches highly associated with the spatiotemporal variable redox dynamics in soil environments. Highlights: The time needed to turn from reducing to oxidising (period where all platinum electrodes feature E〈sub〉H〈/sub〉 〉 300 mV) condition differ for two samples with contrasting soil structure. The subsoil with presumably low O〈sub〉2〈/sub〉 consumption rates aerated considerably faster than the topsoil and exclusively by O〈sub〉2〈/sub〉 diffusion through medium‐ and fine‐sized pores. To derive the soil redox status based upon the triplet ε–O〈sub〉2〈/sub〉–E〈sub〉H〈/sub〉 is challenging at present in heterogeneous soil domains and larger soil volumes than 250 cm〈sup〉3〈/sup〉. Undisturbed soil sampling along with 2D/3D redox measurement systems (e.g., redoxtrons) improve our understanding of redox dynamics within the capillary fringe.
    Keywords: ddc:631.4 ; environmental monitoring ; incubation experiments ; redox processes ; soil reducing conditions ; undisturbed soil ; X‐ray microtomography
    Language: English
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  • 18
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    The dilemma of analytical method changes for soil organic carbon in long‐term experiments (2023)
    Blackwell Publishing Ltd | Oxford, UK
    Details
    Publication Date: 2023-11-17
    Description: 〈title xmlns:mml="http://www.w3.org/1998/Math/MathML"〉Abstract〈/title〉〈sec xmlns:mml="http://www.w3.org/1998/Math/MathML" id="ejss13362-sec-1003" xml:lang="en"〉 〈p xml:lang="en"〉Long‐term experiments (LTEs) have provided data to modellers and agronomists to investigate changes and dynamics of soil organic carbon (SOC) under different cropping systems. As treatment changes have occurred due to agricultural advancements, so too have analytical soil methods. This may lead to method bias over time, which could affect the robust interpretation of data and conclusions drawn. This study aims to quantify differences in SOC due to changes in dry combustion methods over time, using soil samples of a LTE established in 1963 that focuses on mineral and organic fertilizer management in the temperate zone of Northeast Germany. For this purpose, 1059 soil samples, collected between 1976 and 2008, have been analysed twice, once with their historical laboratory method right after sampling, and a second time in 2016 when all samples were analysed using the same elementary analyser. In 9 of 11 soil sampling campaigns, a paired 〈italic toggle="no"〉t〈/italic〉‐test provided evidence for significant differences in the historical SOC values when compared with the re‐analysed concentrations of the same LTE sample. In the sampling years 1988 and 2004, the historical analysis obtained about 0.9 g kg〈sup〉−1〈/sup〉 lower SOC compared with the re‐analysed one. For 1990 and 1998, this difference was about 0.4 g kg〈sup〉−1〈/sup〉. Correction factors, an approach often used to correct for different analytical techniques, could only be applied for 5 of 11 sampling campaigns to account for constant and proportional systematic method error. For this particular LTE, the interpretation of SOC changes due to agronomic management (here fertilization) deviates depending on the analytical method used, which may weaken the explanatory power of the historical data. We demonstrate that analytical method changes over time present one of many challenges in the interpretation of time series data of SOC dynamics. Therefore, LTE site managers need to ensure providing all necessary protocols and data in order to retrace method changes and if necessary recalculate SOC.〈/p〉 〈/sec〉〈sec xmlns:mml="http://www.w3.org/1998/Math/MathML" id="ejss13362-sec-0003" xml:lang="en"〉 〈title〉Highlights〈/title〉 〈p xml:lang="en"〉〈list list-type="bullet" id="ejss13362-list-0001"〉 〈list-item id="ejss13362-li-0001"〉〈p〉A total of 1059 LTE soil samples taken between 1976 and 2008 were re‐analysed for SOC in 2016〈/p〉〈/list-item〉 〈list-item id="ejss13362-li-0002"〉〈p〉Several methodological changes for SOC determination led to significant different SOC concentration in the same sample〈/p〉〈/list-item〉 〈list-item id="ejss13362-li-0003"〉〈p〉Interpretation and time series of LTE soil data suffer from consideration of analytical method changes and poor documentation of the same〈/p〉〈/list-item〉 〈list-item id="ejss13362-li-0004"〉〈p〉Soil archive establishment, thorough method protocols and diligent proficiency testing after soil method changes ameliorate the dilemma〈/p〉〈/list-item〉 〈/list〉〈/p〉 〈/sec〉
    Description: Brandenburger Staatsministerium für Wissenschaft, Forschung und Kultur http://dx.doi.org/10.13039/501100004581
    Description: Bundesministerium für Bildung und Forschung http://dx.doi.org/10.13039/501100004937
    Description: https://doi.org/10.4228/zalf-acge-b683
    Keywords: ddc:631.4 ; Bland–Altman ; carbon stocks ; data trueness ; Deming regression ; method bias ; soil archive ; soil survey
    Language: English
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  • 19
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    Optimised use of data fusion and memory‐based learning with an Austrian soil library for predictions with infrared data (2023)
    Blackwell Publishing Ltd | Oxford, UK
    Details
    Publication Date: 2023-12-12
    Description: 〈title xmlns:mml="http://www.w3.org/1998/Math/MathML"〉Abstract〈/title〉〈p xmlns:mml="http://www.w3.org/1998/Math/MathML" xml:lang="en"〉Infrared spectroscopy in the visible to near‐infrared (vis–NIR) and mid‐infrared (MIR) regions is a well‐established approach for the prediction of soil properties. Different data fusion and training approaches exist, and the optimal procedures are yet undefined and may depend on the heterogeneity present in the set and on the considered scale. The objectives were to test the usefulness of partial least squares regressions (PLSRs) for soil organic carbon (SOC), total carbon (C〈sub〉t〈/sub〉), total nitrogen (N〈sub〉t〈/sub〉) and pH using vis–NIR and MIR spectroscopy for an independent validation after standard calibration (use of a general PLSR model) or using memory‐based learning (MBL) with and without spiking for a national spectral database. Data fusion approaches were simple concatenation of spectra, outer product analysis (OPA) and model averaging. In total, 481 soils from an Austrian forest soil archive were measured in the vis–NIR and MIR regions, and regressions were calculated. Fivefold calibration‐validation approaches were carried out with a region‐related split of spectra to implement independent validations with n ranging from 47 to 99 soils in different folds. MIR predictions were generally superior over vis–NIR predictions. For all properties, optimal predictions were obtained with data fusion, with OPA and spectra concatenation outperforming model averaging. The greatest robustness of performance was found for OPA and MBL with spiking with 〈italic toggle="no"〉R〈/italic〉〈sup〉2〈/sup〉 ≥ 0.77 (N), 0.85 (SOC), 0.86 (pH) and 0.88 (C〈sub〉t〈/sub〉) in the validations of all folds. Overall, the results indicate that the combination of OPA for vis–NIR and MIR spectra with MBL and spiking has a high potential to accurately estimate properties when using large‐scale soil spectral libraries as reference data. However, the reduction of cost‐effectiveness using two spectrometers needs to be weighed against the potential increase in accuracy compared to a single MIR spectroscopy approach.〈/p〉
    Description: Deutsche Forschungsgemeinschaft http://dx.doi.org/10.13039/501100001659
    Keywords: ddc:631.4 ; data fusion ; independent validation ; infrared spectroscopy ; MBL ; nitrogen ; outer product analysis ; pH ; soil organic carbon ; spiking ; total carbon
    Language: English
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  • 20
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    Mapping the 3D position of battery cathode particles in Bragg coherent diffractive imaging (2023)
    International Union of Crystallography | 5 Abbey Square, Chester, Cheshire CH1 2HU, England
    Details
    Publication Date: 2023-12-14
    Description: In Bragg coherent diffractive imaging, the precise location of the measured crystals in the interior of the sample is usually missing. Obtaining this information would help the study of the spatially dependent behavior of particles in the bulk of inhomogeneous samples, such as extra‐thick battery cathodes. This work presents an approach to determine the 3D position of particles by precisely aligning them at the instrument axis of rotation. In the test experiment reported here, with a 60 µm‐thick LiNi0.5Mn1.5O4 battery cathode, the particles were located with a precision of 20 µm in the out‐of‐plane direction, and the in‐plane coordinates were determined with a precision of 1 µm.
    Description: A method to determine the 3D position of particles in Bragg coherent diffractive imaging experiments is proposed. Test measurements demonstrate depth‐resolution with a precision of 20 µm along the beam. image
    Keywords: ddc:548 ; extra‐thick battery cathodes ; Bragg coherent X‐ray diffractive imaging ; battery cathodes ; Bragg diffraction ; sphere of confusion ; 3D mapping
    Language: English
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  • 21
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    Importance of catchment hydrological processes and calibration of hydrological‐hydrodynamic rainfall‐runoff models in small rural catchments (2023)
    Blackwell Publishing Ltd | Oxford, UK
    Details
    Publication Date: 2024-01-19
    Description: 〈title xmlns:mml="http://www.w3.org/1998/Math/MathML"〉Abstract〈/title〉〈p xmlns:mml="http://www.w3.org/1998/Math/MathML" xml:lang="en"〉In recent years, many two‐dimensional (2D) hydrodynamic models have been extended to include the direct rainfall method (DRM). This allows their application as a hydrological‐hydrodynamic model for the determination of floodplains in one model system. In previous studies on DRM, the role of catchment hydrological processes (CaHyPro) and its interaction with the calibration process was not investigated in detail. In the present, case‐oriented study, the influence of the spatiotemporal distribution of the processes precipitation and runoff formation in combination with the 2D model HEC‐RAS is investigated. In a further step, a conceptual approach for event‐based interflow is integrated. The study is performed on the basis of a single storm event in a small rural catchment (low mountain range, 38 km〈sup〉2〈/sup〉) in Hesse (Germany). The model results are evaluated against six quality criteria and compared to a simplified baseline model. Finally, the calibrated improved model is contrasted with a calibrated baseline model. The results show the enhancement of the model results due to the integration of the CaHyPro and highlight its interplay with the calibrated model parameters.〈/p〉
    Keywords: ddc:551.48 ; 2D hydrodynamic modeling ; calibration ; direct rainfall modeling ; hydrological processes ; radar data ; runoff formation
    Language: English
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  • 22
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    The soft X‐ray and XUV split‐and‐delay unit at beamlines FL23/24 at FLASH2 (2023)
    International Union of Crystallography | 5 Abbey Square, Chester, Cheshire CH1 2HU, England
    Details
    Publication Date: 2024-01-12
    Description: A split‐and‐delay unit for the extreme ultraviolet and soft X‐ray spectral regions has been built which enables time‐resolved experiments at beamlines FL23 and FL24 at the Free‐electron LASer in Hamburg (FLASH). Geometric wavefront splitting at a sharp edge of a beam splitting mirror is applied to split the incoming soft X‐ray pulse into two beams. Ni and Pt coatings at grazing incidence angles have been chosen in order to cover the whole spectral range of FLASH2 and beyond, up to hν = 1800 eV. In the variable beam path with a grazing incidence angle of ϑd = 1.8°, the total transmission (T) ranges are of the order of 0.48 〈 T 〈 0.84 for hν 〈 100 eV and T 〉 0.50 for 100 eV 〈 hν 〈 650 eV with the Ni coating, and T 〉 0.06 for hν 〈 1800 eV for the Pt coating. For a fixed beam path with a grazing incidence angle of ϑf = 1.3°, a transmission of T 〉 0.61 with the Ni coating and T 〉 0.23 with a Pt coating is achieved. Soft X‐ray pump/soft X‐ray probe experiments are possible within a delay range of −5 ps 〈 Δt 〈 +18 ps with a nominal time resolution of tr = 66 as and a measured timing jitter of tj = 121 ± 2 as. First experiments with the split‐and‐delay unit determined the averaged coherence time of FLASH2 to be τc = 1.75 fs at λ = 8 nm, measured at a purposely reduced coherence of the free‐electron laser.
    Description: The properties of the recently installed split‐and‐delay unit at beamlines FL23 and FL24 at FLASH2 are presented. Its operational range, performance parameters and results of a first experiment are described. image
    Keywords: ddc:550.724 ; time‐resolved pump–probe ; XUV ; soft X‐rays ; free‐electron laser
    Language: English
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  • 23
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    XDSGUI: a graphical user interface for XDS, SHELX and ARCIMBOLDO (2023)
    International Union of Crystallography | 5 Abbey Square, Chester, Cheshire CH1 2HU, England
    Details
    Publication Date: 2024-01-12
    Description: 〈p xmlns:mml="http://www.w3.org/1998/Math/MathML" xml:lang="en"〉〈italic〉XDSGUI〈/italic〉 is a lightweight graphical user interface (GUI) for the 〈italic〉XDS〈/italic〉, 〈italic〉SHELX〈/italic〉 and 〈italic〉ARCIMBOLDO〈/italic〉 program packages that serves both novice and experienced users in obtaining optimal processing and phasing results for X‐ray, neutron and electron diffraction data. The design of the program enables data processing and phasing without command line usage, and supports advanced command flows in a simple user‐modifiable and user‐extensible way. The GUI supplies graphical information based on the tabular log output of the programs, which is more intuitive, comprehensible and efficient than text output can be.〈/p〉
    Description: 〈p xmlns:mml="http://www.w3.org/1998/Math/MathML" xml:lang="en"〉A customizable stateless graphical user interface simplifies the processing, analysis and phasing of diffraction data.〈boxed-text position="anchor" content-type="graphic" xml:lang="en"〉〈graphic position="anchor" id="jats-graphic-1" xlink:href="urn:x-wiley:16005767:jcr2yr5110:jcr2yr5110-fig-0001"〉 〈alt-text〉image〈/alt-text〉 〈/graphic〉〈/boxed-text〉〈/p〉
    Keywords: ddc:548 ; X‐ray diffraction ; neutron diffraction ; electron diffraction ; data processing ; graphical user interfaces ; phasing ; XDS ; ARCIMBOLDO ; SHELX
    Language: English
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  • 24
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    BODIUM—A systemic approach to model the dynamics of soil functions (2023)
    Blackwell Publishing Ltd | Oxford, UK
    Details
    Publication Date: 2024-01-26
    Description: 〈title xmlns:mml="http://www.w3.org/1998/Math/MathML"〉Abstract〈/title〉〈p xmlns:mml="http://www.w3.org/1998/Math/MathML" xml:lang="en"〉The increasing demand for biomass for food, animal feed, fibre and bioenergy requires optimization of soil productivity, while at the same time, protecting other soil functions such as nutrient cycling and buffering, carbon storage, habitat for biological activity and water filter and storage. Therefore, one of the main challenges for sustainable agriculture is to produce high yields while maintaining all the other soil functions. Mechanistic simulation models are an essential tool to fully understand and predict the complex interactions between physical, biological and chemical processes of soils that generate those functions. We developed a soil model to simulate the impact of various agricultural management options and climate change on soil functions by integrating the relevant processes mechanistically and in a systemic way. As a special feature, we include the dynamics of soil structure induced by tillage and biological activity, which is especially relevant in arable soils. The model operates on a 1D soil profile consisting of a number of discrete layers with dynamic thickness. We demonstrate the model performance by simulating crop growth, root growth, nutrient and water uptake, nitrogen cycling, soil organic matter turnover, microbial activity, water distribution and soil structure dynamics in a long‐term field experiment including different crops and different types and levels of fertilization. The model is able to capture essential features that are measured regularly including crop yield, soil organic carbon, and soil nitrogen. In this way, the plausibility of the implemented processes and their interactions is confirmed. Furthermore, we present the results of explorative simulations comparing scenarios with and without tillage events to analyse the effect of soil structure on soil functions. Since the model is process‐based, we are confident that the model can also be used to predict quantities that have not been measured or to estimate the effect of management measures and climate states not yet been observed. The model thus has the potential to predict the site‐specific impact of management decisions on soil functions, which is of great importance for the development of a sustainable agriculture that is currently also on the agenda of the ‘Green Deal’ at the European level.〈/p〉
    Description: Bundesministerium für Bildung und Forschung http://dx.doi.org/10.13039/501100002347
    Description: https://git.ufz.de/bodium/bodium_v1.0
    Keywords: ddc:631.4 ; agriculture ; computational model ; simulation ; soil microbiology ; soil structure ; sustainable soil
    Language: English
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  • 25
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    Temperature and soil moisture change microbial allocation of pesticide‐derived carbon (2023)
    Blackwell Publishing Ltd | Oxford, UK
    Details
    Publication Date: 2024-03-18
    Description: 〈title xmlns:mml="http://www.w3.org/1998/Math/MathML"〉Abstract〈/title〉〈p xmlns:mml="http://www.w3.org/1998/Math/MathML" xml:lang="en"〉Temperature and soil moisture are known to control pesticide mineralization. Half‐life times (DT〈sub〉50〈/sub〉) derived from pesticide mineralization curves generally indicate longer residence times at low soil temperature and moisture but do not consider potential changes in the microbial allocation of pesticide‐derived carbon (C). We aimed to determine carbon use efficiency (CUE, formation of new biomass relative to total C uptake) to better understand microbial utilization of pesticide‐derived C under different environmental conditions and to support the conventional description of degradation dynamics based on mineralization. We performed a microcosm experiment at two MCPA (2‐methyl‐4‐chlorophenoxyacetic acid) concentrations (1 and 20 mg kg〈sup〉−1〈/sup〉) and defined 20°C/pF 1.8 as optimal and 10°C/pF 3.5 as limiting environmental conditions. After 4 weeks, 70% of the initially applied MCPA was mineralized under optimal conditions but MCPA mineralization reached less than 25% under limiting conditions. However, under limiting conditions, an increase in CUE was observed, indicating a shift towards anabolic utilization of MCPA‐derived C. In this case, increased C assimilation implied C storage or the formation of precursor compounds to support resistance mechanisms, rather than actual growth since we did not find an increase in the 〈italic toggle="no"〉tfdA〈/italic〉 gene relevant to MCPA degradation. We were able to confirm the assumption that under limiting conditions, C assimilation increases relative to mineralization and that C redistribution, may serve as an explanation for the difference between mineralization and MCPA dissipation‐derived degradation dynamics. In addition, by introducing CUE to the temperature‐ and moisture‐dependent degradation of pesticides, we can capture the underlying microbial constraints and adaptive mechanisms to changing environmental conditions.〈/p〉
    Description: 〈p xmlns:mml="http://www.w3.org/1998/Math/MathML" xml:lang="en"〉Changing environmental conditions alter the MCPA degradation dynamics and the allocation of pesticide‐derived carbon to anabolic or catabolic metabolism.〈boxed-text position="anchor" content-type="graphic" id="ejss13417-blkfxd-0001" xml:lang="en"〉 〈graphic position="anchor" id="jats-graphic-1" xlink:href="urn:x-wiley:13510754:media:ejss13417:ejss13417-toc-0001"〉 〈/graphic〉 〈/boxed-text〉〈/p〉
    Description: Collaborative Research Center 1253 CAMPOS (DFG)
    Description: Deutsche Forschungsgemeinschaft http://dx.doi.org/10.13039/501100001659
    Description: DFG Priority Program 2322 “Soil System”
    Description: Ellrichshausen Foundation
    Description: Research Training Group “Integrated Hydrosystem modeling”
    Description: https://doi.org/10.5281/zenodo.5081655
    Keywords: ddc:631.4 ; anabolism ; carbon use efficiency ; catabolism ; effect of soil moisture and temperature ; gene‐centric process model ; MCPA biodegradation
    Language: English
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  • 26
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    Fifty years after deep‐ploughing: Effects on yield, roots, nutrient stocks and soil structure (2023)
    Blackwell Publishing Ltd | Oxford, UK
    Details
    Publication Date: 2024-05-30
    Description: 〈title xmlns:mml="http://www.w3.org/1998/Math/MathML"〉Abstract〈/title〉〈p xmlns:mml="http://www.w3.org/1998/Math/MathML" xml:lang="en"〉Deep‐ploughing far beyond the common depth of 30 cm was used more than 50 years ago in Northern Germany with the aim to break root‐restricting layers and thereby improve access to subsoil water and nutrient resources. We hypothesized that effects of this earlier intervention on soil properties and yields prevailed after 50 years. Hence, we sampled two sandy soils and one silty soil (Cambisols and a Luvisol) of which half of the field had been deep‐ploughed 50 years ago (soils then re‐classified as Treposols). The adjacent other half was not deep‐ploughed and thus served as the control. At all the three sites, both deep‐ploughed and control parts were then conventionally managed over the last 50 years. We assessed yields during the dry year 2019 and additionally in 2020, and rooting intensity at the year of sampling (2019), as well as changes in soil structure, carbon and nutrient stocks in that year. We found that deep‐ploughing improved yields in the dry spell of 2019 at the sandy sites, which was supported by a more general pattern of higher NDVI indices in deep‐ploughed parts for the period from 2016 to 2021 across varying weather conditions. Subsoil stocks of soil organic carbon and total plant‐available phosphorus were enhanced by 21%–199% in the different sites. Root biomass in the subsoil was reduced due to deep‐ploughing at the silty site and was increased or unaffected at the sandy sites. Overall, the effects of deep‐ploughing were site‐specific, with reduced bulk density in the buried topsoil stripes in the subsoil of the sandy sites, but with elevated subsoil density in the silty site. Hence, even 50 years after deep‐ploughing, changes in soil properties are still detectable, although effect size differed among sites.〈/p〉
    Description: BonaRes http://dx.doi.org/10.13039/501100022576
    Keywords: ddc:631.4 ; aggregates ; carbon sequestration ; deep‐ploughing ; macronutrients ; subsoil ; Treposol
    Language: English
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  • 27
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    Floatation and control of granular sludge in a high-rate anammox reactor (2010)
    Elsevier
    In:  Water Research, 44 (11). pp. 3321-3328.
    Details
    Publication Date: 2017-07-18
    Description: The granule floatation is a serious issue of the anammox (anaerobic ammonium oxidation) process when high loading rates are applied that results in instability or even system collapse. The present study reports the granule floatation in an anammox reactor when high loading rates were applied. The comparison of enlarged photos taken for the settling and floating granules showed that the two kinds of granules both contained macroscopic gas pockets accounting for 11 +/- 14% of total volume. The settling granules had gas tunnels that could release the gas bubbles, while the floating granules did not. The presence of gas bubbles enclosed in the gas pockets led to the small density of 979.2 +/- 15.8 mg L(-1) and flotation of anammox granules. Consequently, the flotation caused washout of anammox granules and the deterioration of anammox process (volumetric removal rate decreased from 4.00 to 2.46 kg N m(-3) d(-1)). The collection of floating granules, breaking them into small pieces and then returning to the anammox reactor proved an effective control strategy. The volumetric removal rate was finally up to 16.5 kg N m(-3) d(-1) after the control strategy was put into use.
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  • 28
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    Habitats of the Cap de Creus continental shelf and Cap de Creus Canyon, Northwestern Mediterranean (2012)
    Elsevier
    In:  In: Seafloor Geomorphology as Benthic Habitat. , ed. by Harris, P. T. and Baker, E. K. Elsevier, Amsterdam, pp. 457-469. ISBN 978-0-12-385140-6
    Details
    Publication Date: 2017-06-20
    Description: The Cap de Creus continental shelf and Cap de Creus canyon are located in the southern most sector of the Gulf of Lions, in the northwestern Mediterranean. The Cap de Creus continental shelf contains sandy and muddy sediments and an abrupt morpho­ logy, with rocky outcrops, relict bioherms, erosive features, and planar bedforms. The Cap de Creus canyon breaches the shelf at a depth of 110 m and denotes a marked dif­ ference in the morphology between the northern and the southern flank, reflecting a different depositional regime. The most common substrates correspond to coarse and medium sands (28%) and silty sediments (40%). The most common megabenthic assemblages of the shelf correspond to the communities of "offshore detritic" (31.95%) and "coastal terrigenous muds" (36.99%), mostly dominated by sea pens, alcyonaceans, and ceriantharians. The northern flank of the Cap de Creus canyon is predominantly depositional, whereas the southern flank is erosional. Rocky outcrops provide the sub­ stratum for cold­water coral (CWC) communities' development, in which the white coral Madrepora oculata is the most abundant species.
    Type: Book chapter , NonPeerReviewed
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  • 29
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    Isotopic, geophysical and biogeochemical investigation of submarine groundwater discharge: IAEA-UNESCO intercomparison exercise at Mauritius Island (2012)
    Elsevier
    In:  Journal of Environmental Radioactivity, 104 . pp. 24-45.
    Details
    Publication Date: 2018-03-08
    Description: Submarine groundwater discharge (SGD) into a shallow lagoon on the west coast of Mauritius Island (Flic-en-Flac) was investigated using radioactive (3H, 222Rn, 223Ra, 224Ra, 226Ra, 228Ra) and stable (2H, 18O) isotopes and nutrients. SGD intercomparison exercises were carried out to validate the various approaches used to measure SGD including radium and radon measurements, seepage rate measurements using manual and automated meters, sediment bulk conductivity and salinity surveys. SGD measurements using benthic chambers placed on the floor of the Flic-en-Flac Lagoon showed discharge rates up to 500 cm/day. Large variability in SGD was observed over distances of a few meters, which were attributed to different geomorphological features. Deployments of automated seepage meters captured the spatial and temporal variability of SGD with a mean seepage rate of 10 cm/day. The stable isotopic composition of submarine waters was characterized by significant variability and heavy isotope enrichment and was used to predict the contribution of fresh terrestrially derived groundwater to SGD (range from a few % to almost 100%). The integrated SGD flux, estimated from seepage meters placed parallel to the shoreline, was 35 m3/m day, which was in reasonable agreement with results obtained from a hydrologic water balance calculation (26 m3/m day). SGD calculated from the radon inventory method using in situ radon measurements were between 5 and 56 m3/m per day. Low concentrations of radium isotopes observed in the lagoon water reflected the low abundance of U and Th in the basalt that makes up the island. High SGD rates contribute to high nutrients loading to the lagoon, potentially leading to eutrophication. Each of the applied methods yielded unique information about the character and magnitude of SGD. The results of the intercomparison studies have resulted a better understanding of groundwater–seawater interactions in coastal regions. Such information is an important pre-requisite for the protection and management of coastal freshwater resources. Highlights ► Large fluctuations in SGD fluxes from 0 to 360 cm/day were observed. ► The integrated shoreline SGD fluxes were between 5 and 56 m3/m day. ► The groundwater contribution in SGD varied from a few % to almost 100%. ► The observed high SGD rates contributed to high nutrients loading to the lagoon.
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  • 30
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    Evaluation of boron isotope ratio as a pH proxy in the deep sea coral Desmophyllum dianthus: Evidence of physiological pH adjustment (2012)
    Elsevier
    In:  Earth and Planetary Science Letters, 349-350 . pp. 251-260.
    Details
    Publication Date: 2018-03-07
    Description: The boron isotope ratio (δ11B) of foraminifers and tropical corals has been proposed to record seawater pH. To test the veracity and practicality of this potential paleo-pH proxy in deep sea corals, samples of skeletal material from twelve archived modern Desmophyllum dianthus (D. dianthus) corals from a depth range of 274–1470 m in the Atlantic, Pacific, and Southern Oceans, ambient pH range 7.57–8.05, were analyzed for δ11B. The δ11B values for these corals, spanning a range from 23.56 to 27.88, are found to be related to seawater borate δ11B by the linear regression: δ11Bcoral=(0.76±0.28) δ11Bborate+(14.67±4.19) (1 standard error (SE)). The D. dianthus δ11B values are greater than those measured in tropical corals, and suggest substantial physiological modification of pH in the calcifying space by a value that is an inverse function of seawater pH. This mechanism partially compensates for the range of ocean pH and aragonite saturation at which this species grows, enhancing aragonite precipitation and suggesting an adaptation mechanism to low pH environments in intermediate and deep waters. Consistent with the findings of Trotter et al. (2011) for tropical surface corals, the data suggest an inverse correlation between the magnitude of a biologically driven pH offset recorded in the coral skeleton, and the seawater pH, described by the equation: ΔpH=pH recorded by coral−seawater pH=−(0.75±0.12) pHw+(6.88±0.93) (1 SE). Error analysis based on 95% confidence interval(CI) and the standard deviation of the regression residuals suggests that the uncertainty of seawater pH reconstructed from δ11Bcoral is ±0.07 to 0.12 pH units. This study demonstrates the applicability of δ11B in D. dianthus to record ambient seawater pH and holds promise for reconstructing oceanic pH distribution and history using fossil corals.
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  • 31
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    Coral skeleton P/Ca proxy for seawater phosphate: Multi-colony calibration with a contemporaneous seawater phosphate record (2010)
    Elsevier
    In:  Geochimica et Cosmochimica Acta, 74 (4). pp. 1282-1293.
    Details
    Publication Date: 2018-03-06
    Description: A geochemical proxy for surface ocean nutrient concentrations recorded in coral skeleton could provide new insight into the connections between sub-seasonal to centennial scale nutrient dynamics, ocean physics, and primary production in the past. Previous work showed that coralline P/Ca, a novel seawater phosphate proxy, varies synchronously with annual upwelling-driven cycles in surface water phosphate concentration. However, paired contemporaneous seawater phosphate time-series data, needed for rigorous calibration of the new proxy, were lacking. Here we present further development of the P/Ca proxy in Porites lutea and Montastrea sp. corals, showing that skeletal P/Ca in colonies from geographically distinct oceanic nutrient regimes is a linear function of seawater phosphate (PO4 SW) concentration. Further, high-resolution P/Ca records in multiple colonies of Pavona gigantea and Porites lobata corals grown at the same upwelling location in the Gulf of Panamá were strongly correlated to a contemporaneous time-series record of surface water PO4 SW at this site (r2 = 0.7–0.9). This study supports application of the following multi-colony calibration equations to down-core records from comparable upwelling sites, resulting in ±0.2 and ±0.1 μmol/kg uncertainties in PO4 SW reconstructions from P. lobata and P. gigantea, respectively. Inter-colony agreement in P/Ca response to PO4 SW was good (±5–12% about mean calibration slope), suggesting that species-specific calibration slopes can be applied to new coral P/Ca records to reconstruct past changes in surface ocean phosphate. However, offsets in the y-intercepts of calibration regressions among co-located individuals and taxa suggest that biologically-regulated “vital effects” and/or skeletal extension rate may also affect skeletal P incorporation. Quantification of the effect of skeletal extension rate on P/Ca could lead to corrected calibration equations and improved inter-colony P/Ca agreement. Nevertheless, the efficacy of the P/Ca proxy is thus supported by both broad scale correlation to mean surface water phosphate and regional calibration against documented local seawater phosphate variations.
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  • 32
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    The mechanism of fucoidan-induced apoptosis in leukemic cells: Involvement of ERK1/2, JNK, glutathione, and nitric oxide (2010)
    Wiley
    In:  Molecular Carcinogenesis, 49 (8). pp. 771-782.
    Details
    Publication Date: 2018-02-20
    Description: Fucoidan, a sulfated polysaccharide in brown seaweed, has various biological activities including anti-tumor activity. We investigated the effects of fucoidan on the apoptosis of human promyeloid leukemic cells and fucoidan-mediated signaling pathways. Fucoidan induced apoptosis of HL-60, NB4, and THP-1 cells, but not K562 cells. Fucoidan treatment of HL-60 cells induced activation of caspases-8, -9, and -3, the cleavage of Bid, and changed mitochondrial membrane permeability. Fucoidan-induced apoptosis, cleavage of procaspases, and changes in the mitochondrial membrane permeability were efficiently blocked by depletion of mitogen-activated protein kinase (MAPK) kinase kinase 1 (MEKK1), and inhibitors of MAPK kinase 1 (MEK1) and c Jun NH2-terminal kinase (JNK). The phosphorylation of extracellular signal-regulated kinase 1/2 (ERK1/2) and JNK was increased in fucoidan-treated HL-60, NB4, and THP-1 cells, but not K562 cells. ERK1/2 activation occurred at earlier times than JNK activation and JNK activation was blocked by MEK1 inhibitor. In addition, fucoidan-induced apoptosis was inhibited by addition of glutathione and/or L-NAME, and fucoidan decreased intracellular glutathione concentrations and stimulated nitric oxide (NO) production. Buthionine-[R,S]-sulfoximine rendered HL-60 cells more sensitive to fucoidan. Depletion of MEKK1 and inhibition of MEK1 restored the intracellular glutathione content and abrogated NO production, whereas inhibition of JNK activation by SP600125 restored intracellular glutathione content but failed to inhibit NO production in fucoidan-treated HL-60 cells. These results suggest that activation of MEKK1, MEK1, ERK1/2, and JNK, depletion of glutathione, and production of NO are important mediators in fucoidan-induced apoptosis of human leukemic cells
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  • 33
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    Recent results based on continuous GPS observations of the GIA process in Fennoscandia from BIFROST (2010)
    Elsevier
    In:  Journal of Geodynamics, 50 (1). pp. 8-18.
    Details
    Publication Date: 2018-06-26
    Description: We present the latest 3D velocity field of the Fennoscandian glacial isostatic adjustment (GIA) process from BIFROST. It is derived from more than 4800 days (13 years) of data at more than 80 permanent GPS sites. We use the GAMIT/GLOBK and the GIPSY/OASIS II software packages for GPS analysis and compare the results. The solution has an internal accuracy at the level of 0.2 mm/year (1 sigma) for horizontal velocities at the best sites. We also present a revised GIA prediction model. At the best sites, the optimal model agrees with the observations to within 0.4 mm/year. However, the model systematically overpredicts the magnitude of horizontal rates in the north. We discuss limitations in computed and presented GNSS station velocities, where especially possible instability over time causing non-linear pattern in vertical time series are considered. In extension, preliminary results from an investigation applying revised analysis strategies on a sparse subset of the database are presented, indicating possible improvements for the future.
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  • 34
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    The enigma of reversed asymmetry in lithodid crabs: absence of evidence for heritability or induction of morphological handedness inLopholithodes foraminatus (2010)
    Wiley
    In:  Evolution & Development, 12 (1). pp. 74-83.
    Details
    Publication Date: 2017-04-03
    Description: Mutations or environmental factors that result in reversal of conspicuous left–right asymmetries provide an opportunity to study developmental mechanisms. They may also provide insight into evolutionary changes in asymmetry states within and between species. King crabs (family Lithodidae) have a larger right claw and females typically exhibit a dextrally offset abdomen. Nevertheless, I observed a high incidence of left handedness in laboratory reared box crabs (Lopholithodes foraminatus) and captured the first known egg-bearing female lithodid to exhibit reversed asymmetry. This provided a unique opportunity to characterize the reversed phenotype and to compare the incidence of reversed asymmetry in the offspring of normal and reversed females. Asymmetry of the chelae became apparent in the first postzoeal stage (glaucothoe) and handedness was maintained through subsequent instars. Females with larger left claws developed reversed abdominal asymmetry by the fourth crab stage. No reversed asymmetry was observed in the mandibles of zoea larvae or juveniles of either handedness. The incidence of reversed asymmetry in glaucothoe reared from one reversed and three normal females was high (between 20% and 30%), and independent of maternity (P=0.67). Removal of the right cheliped of fourth stage zoeae, and the major cheliped of glaucothoe, did not reverse the direction of asymmetry. Elevated larval rearing temperature also did not affect the frequency of reversed individuals. This lack of evidence for either heritability or induction of handedness is enigmatic. Further investigation of reversed asymmetry in lithodid crabs may provide valuable insights into the development and evolution of bilateral asymmetries.
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  • 35
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    Do zebrafish Rh proteins act as dual ammonia-CO2 channels? (2010)
    Wiley
    In:  Journal of Experimental Zoology Part A: Ecological Genetics and Physiology, 313A (9). pp. 618-621.
    Details
    Publication Date: 2020-07-24
    Description: Transfer of the small gaseous molecules CO2 and NH3 across biological membranes, long thought to occur solely by simple diffusion, is now known to be facilitated by members of two multigene families: aquaporins (AQP) and rhesus (Rh) proteins. Although it is accepted that AQP1 and Rh proteins are involved in CO2 and NH3 transfer, respectively, the idea that a single channel can exhibit selectivity for both gases is controversial. Indeed, studies using the same in vitro model (human red blood cells) have provided evidence both for and against a role for Rh proteins as CO2 channels. Thus, this study was initiated to provide in vivo evidence for a dual function of Rh proteins as ammonia and CO2 channels. Here, we show that in zebrafish (Danio rerio), direct ammonia–CO2 competition experiments in adults or translational knockdowns of Rh proteins in larvae affects both ammonia and CO2 excretion. These results suggest that Rh proteins in zebrafish may be common pathways for transport of ammonia and CO2.
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  • 36
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    Groundwater connections under a barrier beach: A case study in the Venice Lagoon (2010)
    Elsevier
    In:  Continental Shelf Research, 30 (2). pp. 119-126.
    Details
    Publication Date: 2018-03-08
    Description: The flow of groundwater beneath barrier islands has been cited as a possible pathway for salt water and chemical exchange between a protected embayment and the open sea. Evidence is presented that identifies an exchange of groundwater through a highly permeable paleoinlet along the barrier beach of Cavallino, which separates the northern Venice Lagoon from the Adriatic Sea. We utilized both point measurements of submarine groundwater discharge (SGD) and a geophysical investigation of the subsurface resistivity to analyze the movement of saline groundwater. Discharge of groundwater and associated nutrients, was higher at the site of a former inlet than at a similar site along the barrier and modulated by the difference in tidal water level between the lagoon and Adriatic Sea. If the measured conditions are typical, storm surge barriers could potentially result in a saline groundwater flow of up to 1.5×106 m3 d−1 into the lagoon.
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  • 37
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    The Indus–Yarlung Zangbo ophiolites from Nanga Parbat to Namche Barwa syntaxes, southern Tibet: First synthesis of petrology, geochemistry, and geochronology with incidences on geodynamic reconstructions of Neo-Tethys (2012)
    Elsevier
    In:  Gondwana Research, 22 (2). pp. 377-397.
    Details
    Publication Date: 2017-12-13
    Description: The purpose of this first synthesis is to summarize findings on the Yarlung Zangbo Suture Zone (YZSZ) ophiolites and discuss still remaining problems. The YZSZ studied for almost 30 years and is the youngest of the sutures recognized on Tibet Plateau. It is now acknowledged that the YZSZ is a complex assemblage of sedimentary, metamorphic and igneous rocks created during and shortly after the collision between India and Eurasia. The ages of the various lithologies span a time interval from the Jurassic to the Middle Miocene, with some Permian and Devonian exotic blocks from mélange zone. The YZSZ is characterized by ophiolitic complexes and ophiolitic mélange. The ophiolites are of two types: non dismembered and dismembered sections. The non disturbed sections, although tectonically reworked, are observed along the segment from Dazhuqu to Jiding in Xigaze area and Spontang ophiolite. The dismembered sequences are found in various locations such as Nidar, Kiogar, Jungbwa, Saga, Sangsang, Xigugabu, and Luobusa. The incomplete stratigraphic log could be connected to intraoceanic or orogenetic origins. The ophiolites are distributed into two groups of ages: the Luobusa, Zedang and Kiogar sequences being Jurassic-Lower Cretaceous whereas all other sequences are of Lower Cretaceous age. Compilation of geochronological data suggest that some ophiolite sequences might have evolved for over more than 70 My from their initial genesis to obduction which occurred around 70–90 My ago. Ophiolites differ in terms of petrological and geochemical aspects however, they were all generated in suprasubduction zone and more specifically in arc (few fore-arc) and back-arc settings. Synthesis of more than 700 geochemical analyses show variable mixing of components from N-MORB-type to IAT-CAB and to OIB end-members. The Jurassic ophiolites show the maximum of arc component while the Lower Cretaceous ones show little to strong mixing. In addition, most ophiolites were created in short lived (30 My) basins and generated close to the Eurasiatic continental margin. We propose that Ladakh–Tibet ophiolites were generated in a suprasubduction context similar to Mariana arc, interarc and back-arc or Tonga–Lau system. The variable arc signature of these ophiolites is directly related to their initial position within the suprasubduction system.
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  • 38
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    Uplift and denudation history at low-elevation passive margins: Insights from morphostratigraphic analysis in the SE Armorican Massif along the French Atlantic margin (2010)
    Elsevier
    In:  Comptes Rendus Geoscience, 342 (3). pp. 215-222.
    Details
    Publication Date: 2017-11-24
    Description: Like other low-elevation passive margins, the French Atlantic margin is characterized by a gradual topographic transition from the coast to low-altitude interior plains or plateaus. Here we propose a morphostratigraphic analysis to constrain long-term landscape evolution and denudation rates, through the characterization of palaeotopographies and related palaeoweatherings in an area restricted to the southeast Armorican Massif. Two regional-scale palaeosurfaces are recognized: (i) the Infraliassic palaeosurface, the truncated weathering profiles of which are sealed by Liassic marine deposits; (ii) the Eocene palaeosurface, underlain by thick kaolinite- and iron-rich palaeosaprolites and by siliceous duricrusts (silcretes). Quantitative constraints on large-scale tectonic uplift and long-term denudation are obtained from these morphostratigraphic markers. Mean uplift and denudation rates calculated on post-Eocene times range between 0.5 and 2 m.Ma-1. These low values imply high landscape stability of the inland margin over most of the Cenozoic.
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  • 39
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    Stress-dilatancy and force chain evolution (2010)
    Wiley
    In:  International Journal for Numerical and Analytical Methods in Geomechanics, 35 (2). pp. 264-292.
    Details
    Publication Date: 2018-04-11
    Description: The evolution of internal structure plays a pivotal role in the macroscopic response of granular materials to applied loads. A case in point is the so‐called ‘stress–dilatancy relation’, a cornerstone of Soil Mechanics. Numerous attempts have been made to unravel the connection between stress–dilatancy and the evolution of fabric and contact forces in a deforming granular medium. We re‐examine this connection in light of the recent findings on force chain evolution, in particular, that of collective force chain failure by buckling. This study is focussed on two‐dimensional deformation of dense granular assemblies. Analysis of individual and collective force chain bucklings is undertaken using data from a discrete element simulation. It is shown that the kinematics of force chain buckling lead to significant levels of local dilatation being developed in the buckling force chain particles and their confining first‐ring neighbors. Findings from the simulation are used to guide the development of a lattice model of collective, localized force chain buckling. Consideration of the statics and kinematics of this process yields a new stress–dilatancy relation. The physics of buckling, even at its simplest form, introduces a richness into the stress–dilatancy formulation in a way that preserves the essential aspects of fabric evolution, specifically the buckling mode.
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  • 40
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    Monitoring of earthquake precursors by multi-parameter stations in Eskisehir region (Turkey) (2010)
    Elsevier
    In:  Applied Geochemistry, 25 (4). pp. 572-579.
    Details
    Publication Date: 2018-05-04
    Description: The objective of this study was to investigate the geochemical and hydrogeological effects of earthquakes on fluids in aquifers, particularly in a seismically active area such as Eskisehir (Turkey) where the Thrace–Eskisehir Fault Zone stretches over the region. The study area is also close to the North Anatolian Fault Zone generating devastating earthquakes such as the ones experienced in 1999, reactivating the Thrace–Eskisehir Fault. In the studied area, Rn and CO2 gas concentrations, redox potential, electrical conductivity, pH, water level, water temperature, and the climatic parameters were continuously measured in five stations for about a year. Based on the gathered data from the stations, some ambiguous anomalies in geochemical parameters and Rn concentration of groundwater were observed as precursors several days prior to an earthquake. According to the mid-term observations of this study, well-water level changes were found to be a good indicator for seismic estimations in the area, as it comprises naturally filtered anomalies reflecting only the changes due to earthquakes. Also, the results obtained from this study suggest that both the changes in well-water level and gas–water chemistry need to be interpretated together for more accurate estimations. Valid for the studied area, it can be said that shallow earthquakes with epicentral distances of 〈30 km from the observation stations have more influence on hydrochemical parameters of groundwater and well-water level changes. Although some hydrochemical anomalies were observed in the area, it requires further observations in order to be able to identify them as precursors.
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  • 41
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    Meltwater and Deglaciation, SE Baffin Shelf (NE Margin Laurentide Ice Sheet) Between 13.5 and 7 KA: From O and C Stable Isotopic Data (2010)
    American Geophysical Union
    In:  Paleoceanography, 6 (5). pp. 621-637.
    Details
    Publication Date: 2020-06-15
    Description: Stable isotopic values on planktonic foraminifera in a suite of cores from basins across the SE Baffin Shelf are used to extract a record of meltwater events during Termination I deglaciation. Resolution and Hatton basins lie on the SE Baffin Shelf at water depths 〉 500 m, seaward of major conduits for ice drainage from the eastern sector of the Laurentide Ice Sheet (LIS). Accelerator mass spectrometry 14C dates are used to constrain our chronology of events in ten cores. In Resolution Basin, three cores have 14C AMS dates on foraminifera of 〉 20 ka at their bases; whereas Hatton Basin cores terminate in sediments 〈 13 kyr. Sedimentation rates varied between 0.1 to 4.5 m/ka. Stable oxygen and carbon isotopic ratios were obtained on 146 samples of the planktonic foraminifera Neogloboquadrina pachyderma (Ehrenberg) sinistral, from seven of the ten cores. No evidence was found to indicate that test morphology or size affected ∂18O. Between 7 and 13.5 ka the surface water on the shelf was on average 1 ‰ lower than the open ocean signal. Significant temporal variations were found in both ∂18O and ∂13C. Evidence for significant low ∂18O events occurred between 13 and 8 ka. The ∂13C record from the planktonic foraminifera suggests a threefold division of events between 13 and 7 ka, with positive values between 10.8 and 13.0 ka, negative values between 9 and 10.8 ka, and positive values from 7 to 9 ka. The ∂18O data suggest the presence of meltwater on the shelf some 3,000 years prior to the first late glacial dates on terrestrial deglaciation (at circa 10.4 ka). “Hudson Strait must be the real key to the importance of the calving process during deglaciation, because it is potentially the largest marine outlet for the Laurentide Ice Sheet and because it leads into the very center of the ice sheet.....the rates of calving through Hudson Strait during the period of initial ∂18O rise unfortunately are unknown.”
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  • 42
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    Efficacy of artificial shelters for roach,Rutilus rutilus, against predators in the presence of reeds (2010)
    Wiley
    In:  Fisheries Management and Ecology, 17 (4). pp. 356-365.
    Details
    Publication Date: 2017-07-03
    Description: Cormorants, Phalacocorax spp., have great potential to affect recreational fisheries and have increased substantially in abundance over the last decades in UK inland waters. Fabricated refuges provide a potential means of reducing fish losses, yet the benefits of such structures may be marginal if natural shelters are abundant and favoured, or if strong density-dependence limits refuge use. This study examined the efficacy of artificial shelters in mesocosm enclosures that allowed standardised and replicated observations of roach, Rutilus rutilus (L.), distribution. When given a choice between occupying open water, simulated reedbeds and artificial brushwood shelters, roach used brushwood shelters extensively across a range of fish densities. When fish had a choice of occupying open water or reedbeds offering no overhead cover, they actively avoided reedbeds and used open water almost exclusively. Occupation of reedbeds was positively related to the amount of overhead cover they provided. When artificial brushwood shelters and reedbeds offered complete overhead cover, brushwood shelters were occupied twice as much as reedbeds. Artificial shelters may therefore have wide application in stillwaters with abundant reedbeds unless the reedbeds are coupled with extensive overhead cover.
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  • 43
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    Global analysis of satellite tracking data shows that adult green turtles are significantly aggregated in Marine Protected Areas (2012)
    Wiley
    In:  Global Ecology and Biogeography, 21 (11). pp. 1053-1061.
    Details
    Publication Date: 2017-12-14
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  • 44
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    Journal of Environmental Radioactivity special issue: Radium and Radon Isotopes as Environmental Tracers (2010)
    Elsevier
    In:  Journal of Environmental Radioactivity, 101 (7). pp. 519-520.
    Details
    Publication Date: 2018-03-08
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  • 45
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    Determination of trace metals in seawater by an automated flow injection ion chromatograph pretreatment system with ICPMS (2010)
    Elsevier
    In:  Talanta, 82 (4). pp. 1478-1484.
    Details
    Publication Date: 2018-03-15
    Description: A novel flow injection ion chromatograph (FI-IC) system has been developed to fully automate pretreatment procedures for multi-elemental analysis of trace metals in seawater by inductively coupled plasma mass spectrometer (ICPMS). By combining 10-port, 2 position and 3-way valves in the FI-IC manifold, the system effectively increase sample throughput by simultaneously processing three seawater samples online for: sample loading, injection, buffering, preconcentration, matrix removal, metal elution, and sample collection. Forty-two seawater samples can be continuously processed without any manual handing. Each sample pretreatment takes about 10 min by consuming 25 mL of seawater and producing 5 mL of processed concentrated samples for multi-elemental offline analysis by ICPMS. The offline analysis improve analytical precision and significantly increase total numbers of isotopes determined by ICPMS, which include the metals Al, Cd, Co, Cr, Cu, Fe, Mn, Ni, Pb, Ti, V, and Zn. The blank value and detection limits of trace metals using the system with ICPMS analysis all range from 0.1 to 10 parts per trillion (ppt), except Al, Fe, and Zn. The accuracy of the pretreatment system was validated by measuring open-ocean and coastal reference seawater, NASS-5 and CASS-4. Using the system with ICPMS analysis, we have obtained reliable trace metal concentrations in the water columns of the South China Sea. Possessing the features of full automation, high throughput, low blank, and low reagent volume used, the system automates and simplifies rigorous and complicated pretreatment procedures for multi-elemental analysis of trace metals in seawater and effectively enhances analytical capacity for trace metal analysis in environmental and seawater samples.
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  • 46
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    Comparison of cyanobacterial and green algal growth rates at different temperatures (2012)
    Wiley
    In:  Freshwater Biology, 58 (3). pp. 552-559.
    Details
    Publication Date: 2018-01-29
    Description: 1. The hypothesis that cyanobacteria have higher optimum growth temperatures and higher growth rates at the optimum as compared to chlorophytes was tested by running a controlled experiment with eight cyanobacteria species and eight chlorophyte species at six different temperatures (20–35 °C) and by performing a literature survey. 2. In the experiment, all organisms except the chlorophyte Monoraphidium minutum grew well up to 35 °C. The chlorophyte Chlamydomonas reinhardtii was the fastest-growing organism over the entire temperature range (20–35 °C). 3. Mean optimum growth temperatures were similar for cyanobacteria (29.2 °C) and chlorophytes (29.2 °C). These results are concordant with published data, yielding slightly higher mean optimum growth temperatures for cyanobacteria (27.2 °C) than for chlorophytes (26.3 °C). 4. Mean growth rates of cyanobacteria at 20 °C (0.42 day−1) were significantly lower than those of chlorophytes at 20 °C (0.62 day−1). However, at all other temperatures, there were no differences between mean growth rates of cyanobacteria and chlorophytes. 5. Mean growth rates at the optimum temperature were similar for cyanobacteria (0.92 day−1) and chlorophytes (0.96 day−1). However, analysis of published data revealed that growth rates of cyanobacteria (0.65 day−1) were significantly lower than those of chlorophytes (0.93 day−1) at their optimum temperatures. 6. Although climate warming will probably lead to an intensification of cyanobacterial blooms, our results indicate that this might not be as a result of higher growth rates of cyanobacteria compared with their chlorophyte competitors. The competitive advantage of cyanobacteria can more likely be attributed to their ability to migrate vertically and prevent sedimentation in warmer and more strongly stratified waters and to their resistance to grazing, especially when warming reduces zooplankton body size.
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  • 47
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    Efficient, large-scale archaeological prospection using a true three-dimensional ground-penetrating Radar Array system (2010)
    Wiley
    In:  Archaeological Prospection, 17 (3). pp. 175-186.
    Details
    Publication Date: 2018-02-22
    Description: The Swedish UNESCO World Cultural Heritage site of the Birka and Hovgården Iron Age settlements is well suited for the testing of high-resolution archaeological prospection methods. In May 2006 ground-penetrating radar (GPR) and magnetometer test measurements were conducted at Birka, resulting in data of outstanding quality and new archaeological discoveries, but also demonstrating the need for increased spatial sampling regarding GPR prospection at complex Scandinavian sites. Therefore Birka was selected as a testing ground for a pilot study investigating the suitability of the novel multichannel GPR array system MIRA (MALÅ Imaging Radar Array) for efficient, large-scale GPR surveys with very dense spatial sampling. The study was conducted in May 2008 by MALÅ Geoscience AB in collaboration with the archaeological prospection unit of the Swedish National Heritage Board. The very high-resolution three-dimensional GPR pilot survey demonstrated that it is possible to survey 1 ha and more per day with 8 cm cross-line spacing, mapping archaeological structures in unprecedented resolution, such as postholes of only 25 cm diameter. This paper describes the tested technology and methodology as well as the fieldwork and the results of the study.
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  • 48
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    Multiscale investigation of shear bands in sand: Physical and numerical experiments (2010)
    Wiley
    In:  International Journal for Numerical and Analytical Methods in Geomechanics, 34 . pp. 1634-1650.
    Details
    Publication Date: 2018-04-11
    Description: In many geotechnical systems, it is not uncommon to observe failure in zones of high localized strain called shear bands. The existing models predict the existence and the extent of these localizations, but provide little insight into the micromechanics within the shear bands. This research captures and compares the variation in microstructure both inside and outside of shear bands that formed in physical laboratory plane strain and companion numerical two-dimensional discrete element method (DEM) biaxial compression experiments. Unsheared and sheared laboratory specimens of Ottawa 20–30 sand of varying dilatancy were solidified using a two-stage resin impregnation procedure. The solidified specimens were sectioned and the resulting surfaces were prepared for microstructure observation using optical bright-field microscopy and stereological analysis. Statistical properties of microstructural parameters for sub-regions in a grid pattern and along predefined inclined zones were determined. Similar measurements were performed on 2D DEM simulation specimens at varying strain levels to characterize the evolution of microstructure with increasing strain. The results showed how differences evolved in the mean, standard deviation, and entropy of void distributions with increasing global strain levels. The results indicate how disorder increases and that the material within the shear band does not adhere to the classical concept of critical state, but reaches a terminal void ratio that is largely a function of initial void ratio. Furthermore, there appears to be a transition zone between the far field and the fully formed shear block, as opposed to an abrupt delineation as is traditionally inferred.
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  • 49
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    Application of Tephrochronology in the Kurile-Kamchatka and Aleutean Marginal Sea-Island Arc Systems (KALMAR-Project) (2012)
    Elsevier
    In:  Quaternary International, 279-280 . p. 511.
    Details
    Publication Date: 2017-01-26
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  • 50
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    Varying sediment sources (Hudson Strait, Cumberland Sound, Baffin Bay) to the NW Labrador Sea slope between and during Heinrich events 0 to 4 (2012)
    Wiley
    In:  Journal of Quaternary Science, 27 (5). pp. 475-484.
    Details
    Publication Date: 2020-07-20
    Description: Core HU97048-007PC was recovered from the continental Labrador Sea slope at a water depth of 945 m, 250km seaward from the mouth of Cumberland Sound, and 400km north of Hudson Strait. Cumberland Sound is a structural trough partly floored by Cretaceous mudstones and Paleozoic carbonates. The record extends from 10 to 58 ka. On-board logging revealed a complex series of lithofacies, including buff-colored detrital carbonate-rich sediments [Heinrich (H)-events] frequently bracketed by black facies. We investigate the provenance of these facies using quantitative X-ray diffraction on drill-core samples from Paleozoic and Cretaceous bedrock from the SE Baffin Island Shelf, and on the〈2-mm sediment fraction in a transect of five cores from Cumberland Sound to the NW Labrador Sea. A sediment unmixing program was used to discriminate between sediment sources, which included dolomite-rich sediments from Baffin Bay, calcite-rich sediments from Hudson Strait and discrete sources from Cumberland Sound. Results indicated that the bulk of the sediment was derived from Cumberland Sound, but Baffin Bay contributed to sediments coeval with H-0 (Younger Dryas), whereas Hudson Strait was the source during H-events 1–4. Contributions from the Cretaceous outcrops within Cumberland Sound bracket H-events, thus both leading and lagging Hudson Strait-sourced H-events.
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  • 51
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    Stable Cu and Zn isotope ratios as tracers of sources and transport of Cu and Zn in contaminated soil (2010)
    Elsevier
    In:  Geochimica et Cosmochimica Acta, 74 (23). pp. 6801-6813.
    Details
    Publication Date: 2017-03-09
    Description: Copper and Zn metals are produced in large quantities for different applications. During Cu production, large amounts of Cu and Zn can be released to the environment. Therefore, the surroundings of Cu smelters are frequently metal-polluted. We determined Cu and Zn concentrations and Cu and Zn stable isotope ratios (δ65Cu, δ66Zn) in three soils at distances of 1.1, 3.8, and 5.3 km from a Slovak Cu smelter and in smelter wastes (slag, sludge, ash) to trace sources and transport of Cu and Zn in soils. Stable isotope ratios were measured by multicollector inductively coupled plasma mass spectrometry (MC-ICP-MS) in total digests. Soils were heavily contaminated with concentrations up to 8087 μg g−1 Cu and 2084 μg g−1 Zn in the organic horizons. The δ65Cu values varied little (−0.12‰ to 0.36‰) in soils and most wastes and therefore no source identification was possible. In soils, Cu became isotopically lighter with increasing depth down to 0.4 m, likely because of equilibrium reactions between dissolved and adsorbed Cu species during transport of smelter-derived Cu through the soil. The δ66ZnIRMM values were isotopically lighter in ash (−0.41‰) and organic horizons (−0.85‰ to −0.47‰) than in bedrock (−0.28‰) and slag (0.18‰) likely mainly because of kinetic fractionation during evaporation and thus allowed for separation of smelter-Zn from native Zn in soil. In particular in the organic horizons large variations in δ66Zn values occur, probably caused by biogeochemical fractionation in the soil–plant system. In the mineral horizons, Zn isotopes showed only minor shifts to heavier δ66Zn values with depth mainly because of the mixing of smelter-derived Zn and native Zn in the soils. In contrast to Cu, Zn isotope fractionation between dissolved and adsorbed species was probably only a minor driver in producing the observed variations in δ66Zn values. Our results demonstrate that metal stable isotope ratios may serve as tracer of sources, vertical dislocation, and biogeochemical behavior in contaminated soil.
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  • 52
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    A Heinrich-like event, H-0 (DC-0): Source(s) for detrital carbonate in the North Atlantic during the Younger Dryas Chronozone (2010)
    American Geophysical Union
    In:  Paleoceanography, 10 (5). pp. 943-952.
    Details
    Publication Date: 2020-06-15
    Description: In the North Atlantic we define H-0 as a Heinrich-like event which occurred during the Younger Dryas chron. On the SE Baffin shelf prior to 11 ka, surface water productivity was reasonably high, as measured by the numbers of diatom and planktic foraminifera per gram, but an abrupt increase in detrital carbonate (DC-0 event) (from approximately 15% up to 50% carbonate by weight) occurred at 11 ± 14C ka and continued to circa 10 ka. These deposits, 2–6 m thick, are dominated by detrital calcite and silt- and clay-sized sediments. During this event (DC-0/H-0), ice extended onto the inner shelf but did not reach the shelf break and probably originated from a center over Labrador-Ungava. As a consequence, the pattern of ice-rafted debris and sediment provenance shown by H-O in the North Atlantic is different from that during H-1 (14.5 ka) or H-2 (20 ka) when the ice sheet extended along the axis of Hudson Strait and may have reached the shelf break; for example, there is no concrete evidence for DC-O is cores on the floor of the Labrador Sea due east of Hudson Strait (HU75-55,-56), but H-O has been noted in cores off Newfoundland and west of Ireland. A coeval carbonate event to DC-0, but this one dominated by dolomite, occurs in HU82-SU5 on the west side of Davis Strait with a source either from northern Baffin Bay or Cumberland Sound. Although other sources for North Atlantic detrital carbonate cannot be totally excluded, our evidence suggests that H-0 represents the expression of glaciological instability of the Laurentide Ice Sheet within the general region of Hudson Strait and probably to the north (Cumberland Sound and northernmost Baffin Bay). There is one younger DC event, dated circa 8.4 ka, present in sediments along the Labrador margin and in Hudson Strait, which represents the final collapse of the ice sheet within Hudson Strait and Hudson Bay.
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  • 53
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    The contribution of the sensitive high-resolution ion microprobe (SHRIMP) to lunar geochronology (2010)
    Elsevier
    In:  Precambrian Research, 183 (1). pp. 44-49.
    Details
    Publication Date: 2020-06-10
    Description: The sensitive high-resolution ion microprobe (SHRIMP) developed at the Australian National University (ANU) was the first of the high-resolution ion microprobes. The impact of this instrument on geochronological research over the last twenty years has been immense. This is particularly so for lunar geochronology where it has opened up avenues of research that were not possible using conventional TIMS techniques. The great advantage of SHRIMP is that it provides a means for determining precise U–Pb isotopic ratios on selected micron-size areas on polished grains of zircon and other U-bearing minerals. One of the first projects undertaken on the newly invented SHRIMP I was an investigation of U–Pb ages of lunar zircon. Using SHRIMP, multiple analyses could be made on areas of individual zircons to test the stability of U–Pb systems in shocked grains. Also, by analysing grains “in situ”, textural relationships between the analysed zircon and the components of the sample breccia could be used in the interpretation of the SHRIMP data. As a result of this research it was realised that most lunar zircons have ages up to 500Ma older than the Imbrium and Serenitatis impacts at ca. 3.9 Ga, demonstrating that the zircons have not been affected by the these impact events although heating and shock effects have profoundly disturbed other dating systems. This has opened the way for research into the early lunar magmatic and bombardment record. For example, recent SHRIMP results have revealed profound differences in the ages of zircons from breccias from the Apollo 14 and Apollo 17 sample sites, raising new questions about the evolution of lunar magmatism. Also, multiple SHRIMP analyses on complex lunar zircons have shown that these grains can record U–Pb disturbance by later impact events. SHRIMP U–Pb age determinations on phosphates in lunar meteorites has identified lunar events not recognised in samples from the Apollo program. SHRIMP-based research on lunar materials is ongoing and, in combination with other chemical and structural evidence, continues to stimulate new ideas on the early evolution of the Moon.
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  • 54
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    The distribution and speciation of dissolved trace metals in a shallow subterranean estuary (2010)
    Elsevier
    In:  Marine Chemistry, 121 (1-4). pp. 145-156.
    Details
    Publication Date: 2018-03-08
    Description: Geochemical cycles occurring at the interface between terrestrial and marine groundwaters, in the so-called subterranean estuary (STE), are not well understood for most elements. This is particularly true of the transition metals, many of which have particular ecological relevance as micronutrients or toxicants. To gain a first approximation of trace metal geochemistry in the mixing zone, we examined the distribution of nine dissolved metals (Fe, Mn, Mo, V, Co, Ni, Cu, Pb, and Al) through a shallow STE in Great South Bay, New York, USA. We also performed a simple kinetic and chemical separation of labile and organic-complexed metal species in the STE. Dissolved Mn showed marked subsurface enrichment (up to 755 µM at 15 cm depth) that was suggestive of diagenetic remobilization. Dissolved Fe, however, was higher by more than three orders-of-magnitude in fresh groundwater (90 µM) as compared to marine groundwater (0.02 µM), and pH-mediated removal was evident as slightly acidic fresh groundwater (pH 6.8) mixed with marine groundwater (pH ∼ 8.0). Dissolved Mo, Co, and Ni were primarily cycled with Mn, and highly elevated concentrations relative to bay surface waters (up to 300, 75, and 44 nM, respectively) were observed in the STE. High levels of dissolved Pb (up to 4250 pM) observed in the fresh groundwater were nearly quantitatively removed within the salinity mixing zone, in conjunction with marked reduction of dissolved Al. Dissolved Cu exhibited non-conservative removal throughout the STE, and was correlated with the redox potential of the porewaters. Substantial percentages (〉 15%) of organic-metal species were only observed for Cu and Ni, suggesting that these complexes were not generally very important for metal cycling in the STE. Kinetically labile species were observed for all metals examined except Cu and Pb, and represented an approximately constant proportion (between 10% and 70%) of the total dissolved pool for each metal, indicating equilibrium between labile and non-labile species throughout the mixing zone. The non-conservative behavior observed for all metals examined in this study suggests that reactions occurring in the STE are vastly important to the source/sink function of permeable sediments, and studies seeking to quantify SGD-derived trace metal fluxes must take into account biogeochemical processes occurring in the subterranean estuary.
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  • 55
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    Cultivation-independent characterization of ‘Candidatus Magnetobacterium bavaricum’ via ultrastructural, geochemical, ecological and metagenomic methods (2010)
    Wiley
    In:  Environmental Microbiology, 12 (9). pp. 2466-2478.
    Details
    Publication Date: 2018-03-08
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  • 56
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    Time-series sampling of 223Ra and 224Ra at the inlet to Great South Bay (New York): a strategy for characterizing the dominant terms in the Ra budget of the bay (2010)
    Elsevier
    In:  Journal of Environmental Radioactivity, 101 (7). pp. 582-588.
    Details
    Publication Date: 2018-03-08
    Description: Ra isotopes are a powerful tool for quantifying the flux of submarine groundwater discharge (SGD) into the sea. Previous studies of 223Ra and 224Ra mass balances in coastal embayments have shown that the Ra balance is dominated by supply via SGD, exchange with the open ocean and radioactive decay. The current study shows that a single time series over a tidal cycle at the principal inlet to Great South Bay (NY, US) is sufficient to determine the net flux of Ra across the inlet, and also can be used to estimate the decay of short-lived Ra in the bay. Estimates of the net Ra flux obtained from a single tidal time-series by using three different approaches agree with those determined from a more time-consuming survey of Ra within the bay, and may represent a first step of estimating SGD in bays and coastal lagoons.
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  • 57
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    Distal tephra record for the last ca 105,000 years from core PRAD 1-2 in the central Adriatic Sea: implications for marine tephrostratigraphy (2010)
    Elsevier
    In:  Quaternary Science Reviews, 29 (23-24). pp. 3079-3094.
    Details
    Publication Date: 2017-12-04
    Description: Core PRAD 1-2, located on the western flank of the Mid-Adriatic Deep, contains a continuous sediment record extending back to upper MIS-11. The upper part of the record which spans the mid Holocene to MIS 5–4 (the last ca 105,000 years) has been investigated for tephra content. A total of 25 discrete tephra layers were discovered, only one of which was visible in the core sequence. The other 24 are not visible to the naked eye, nor were the majority detected by routine down-core scanning methods. A total of 625 geochemical measurements obtained from individual glass shards using WDS-EPMA enabled 21 of the 25 tephras to be assigned to known volcanic events emanating from the Campanian Province (Campi Flegrei, Somma-Vesuvius and Ischia Island). The results provide an independent basis for establishing an age–depth profile for the upper part of the PRAD 1-2 record. This study demonstrates that the number of non-visible tephra layers can significantly exceed the number of visible layers in some deep marine sequences. Routine testing for the presence of non-visible tephra layers can therefore prove rewarding, leading to the detection of additional isochrons for dating and correlating marine sequences, and for their synchronisation with terrestrial records.
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  • 58
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    Calcium isotope ratios in animal and human bone (2010)
    Elsevier
    In:  Geochimica et Cosmochimica Acta, 74 (13). pp. 3735-3750.
    Details
    Publication Date: 2018-02-22
    Description: Calcium isotopes in tissues are thought to be influenced by an individual’s diet, reflecting parameters such as trophic level and dairy consumption, but this has not been carefully assessed. We report the calcium isotope ratios (δ44/42Ca) of modern and archaeological animal and human bone (n = 216). Modern sheep raised at the same location show 0.14 ± 0.08‰ higher δ44/42Ca in females than in males, which we attribute to lactation by the ewes. In the archaeological bone samples the calcium isotope ratios of the herbivorous fauna vary by location. At a single site, the archaeological fauna do not show a trophic level effect. Humans have lower δ44/42Ca than the mean site fauna by 0.22 ± 0.22‰, and the humans have a greater δ44/42Ca range than the animals. No effect of sex or age on the calcium isotope ratios was found, and intra-individual skeletal δ44/42Ca variability is negligible. We rule out dairy consumption as the main cause of the lower human δ44/42Ca, based on results from sites pre-dating animal domestication and dairy availability, and suggest instead that individual physiology and calcium intake may be important in determining bone calcium isotope ratios.
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  • 59
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    Preliminary interpretation of electromagnetic, heat flow, seismic, and geochemical data for gas hydrate distribution across the Porangahau Ridge, New Zealand (2010)
    Elsevier
    In:  Marine Geology, 272 (1-4). pp. 89-98. Date online first: 2009
    Details
    Publication Date: 2017-08-07
    Description: Porangahau Ridge, located offshore the Wairarapa on the Hikurangi Margin, is an active ocean-continent collision region in northeastern New Zealand coastal waters. Bottom simulating reflections (BSRs) in seismic data indicate the potential for significant gas hydrate deposits across this part of the margin. Beneath Porangahau Ridge a prominent high-amplitude reflection band has been observed to extend from a deep BSR towards the seafloor. Review of the seismic data suggest that this high-amplitude band is caused by local shoaling of the base of gas hydrate stability due to advective heat flow and it may constitute the location of elevated gas hydrate concentrations. During R/V Tangaroa cruise TAN0607 in 2006 heat flow probing for measurements of vertical fluid migration, sediment coring for methane concentrations, and additional seismic profiles were obtained across the ridge. In a subsequent 2007 expedition, on R/V Sonne cruise SO191, a controlled source electromagnetic (CSEM) experiment was conducted along the same seismic, geochemical, and heat flow transect to reveal the electrical resistivity distribution. CSEM data highlight a remarkable coincidence of anomalously high resistivity along the western, landward flank of the ridge which point to locally higher gas hydrate concentration above the high amplitude reflection band. Measured sediment temperature profiles, also along the western flank, consistently show non-linear and concave geothermal gradients typical of advective heat flow. Geochemical data reveal elevated methane concentrations in surface sediments concomitant with a rapid decline in sulfate concentrations indicating elevated methane flux and oxidation of methane in conjunction with sulfate reduction at the landward ridge base. Together, these data sets suggest that the western rim of Porangahau Ridge is a tectonically driven zone of rising fluids that transport methane and cause an upward inflection of the base of gas hydrate stability and the formation of locally enriched gas hydrate above the reflective zone.
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  • 60
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    Late Quaternary climatic events and sea-level changes recorded by turbidite activity, Dakar Canyon, NW Africa (2010)
    Elsevier
    In:  Quaternary Research, 73 . pp. 385-392.
    Details
    Publication Date: 2016-09-19
    Description: The relationship of sea-level changes and short-term climatic changes with turbidite deposition is poorly documented, although the mechanisms of gravity-driven sediment transport in submarine canyons during sea-level changes have been reported from many regions. This study focuses on the activity of the Dakar Canyon off southern Senegal in response to major glacial/interglacial sea-level shifts and variability in the NW-African continental climate. The sedimentary record from the canyon allows us to determine the timing of turbidite events and, on the basis of XRF-scanning element data, we have identified the climate signal at a sub-millennial time scale from the surrounding hemipelagic sediments. Over the late Quaternary the highest frequency in turbidite activity in the Dakar Canyon is confined to major climatic terminations when remobilisation of sediments from the shelf was triggered by the eustatic sea-level rise. However, episodic turbidite events coincide with the timing of Heinrich events in the North Atlantic. During these times continental climate has changed rapidly, with evidence for higher dust supply over NW Africa which has fed turbidity currents. Increased aridity and enhanced wind strength in the southern Saharan–Sahelian zone may have provided a source for this dust.
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  • 61
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    Significant portion of dissolved organic Fe complexes in fact is Fe colloids (2010)
    Elsevier
    In:  Marine Chemistry, 122 (1-4). pp. 20-27.
    Details
    Publication Date: 2020-03-24
    Description: Vertical distributions of iron and iron binding ligands were determined in 2 size classes (dissolved 〈 0.2 μm, soluble 〈 200 kDa, e.g., ~ 0.03 μm) in the Southern Ocean. Colloidal iron and complexing capacity (〉 200 kDa–〈 0.2 μm) were inferred as the difference between the dissolved and soluble fractions. Dissolved iron and ligands exist primarily in the soluble size range in the surface waters, although iron-complexing colloids still represent a significant portion of the dissolved pool and this fraction increases markedly with depth. This work presents evidence for the colloidal nature of a significant portion (37–51% on average) of the ‘dissolved’ organic Fe pool in these oceanic waters. From the data it was not possible to discern whether iron colloids exist as discrete organic complexes and/or inorganic amorphous colloids. Iron-complexing colloids are the most saturated with iron at the thermodynamic equilibrium, whereas soluble organic ligands occur in larger excess compared to soluble iron. It suggests that the exchangeable fraction for iron uptake through dissociation of Fe complexes likely occurs in the soluble fraction, and that soluble ligands have the potential to buffer iron inputs to surface waters whereas iron colloids may aggregate and settle. Expectations based on Fe diffusion rates, distributions and the stability of the soluble iron complexes and iron colloids also suggest that the weaker soluble Fe complexes may be more bio-available, while the strongest colloids may be a major route for iron removal from oceanic waters. Investigations of the size classes of the dissolved organic iron thus can significantly increase our understanding of the oceanic iron cycle.
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  • 62
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    13C-18O isotope signatures and ‘clumped isotope’ thermometry in foraminifera and coccoliths (2010)
    Elsevier
    In:  Geochimica et Cosmochimica Acta, 74 . pp. 5697-5717.
    Details
    Publication Date: 2017-09-27
    Description: Accurate constraints on past ocean temperatures and compositions are critical for documenting climate change and resolving its causes. Most proxies for temperature are not thermodynamically based, appear to be subject to biological processes, require regional calibrations, and/or are influenced by fluid composition. As a result, their interpretation becomes uncertain when they are applied in settings not necessarily resembling those in which they were empirically calibrated. Independent proxies for past temperature could provide an important means of testing and/or expanding on existing reconstructions. Here we report measurements of abundances of stable isotopologues of calcitic and aragonitic benthic and planktic foraminifera and coccoliths, relate those abundances to independently estimated growth temperatures, and discuss the possible scope of equilibrium and kinetic isotope effects. The proportions of 13C–18O bonds in these samples exhibits a temperature dependence that is generally similar to that previously been reported for inorganic calcite and other biologically precipitated carbonatecontaining minerals (apatite from fish, reptile, and mammal teeth; calcitic brachiopods and molluscs; aragonitic coral and mollusks). Most species that exhibit non-equilibrium 18O/16O (d18O) and 13C/12C (δ13C) ratios are characterized by 13C–18O bond abundances that are similar to inorganic calcite and are generally indistinguishable from apparent equilibrium, with possible exceptions among benthic foraminiferal samples from the Arctic Ocean where temperatures are near-freezing. Observed isotope ratios in biogenic carbonates can be explained if carbonate minerals generally preserve a state of ordering that reflects the extent of isotopic equilibration of the dissolved inorganic carbon species.
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    The ecophysiology of Sprattus sprattus in the Baltic and North Seas (2012)
    Elsevier
    In:  Progress in Oceanography, 103 . pp. 42-57.
    Details
    Publication Date: 2020-10-16
    Description: The European sprat (Sprattus sprattus) was a main target species of the German GLOBEC program that investigated the trophodynamic structure and function of the Baltic and North Seas under the influence of physical forcing. This review summarizes literature on the ecophysiology of sprat with an emphasis on describing how environmental factors influence the life-history strategy of this small pelagic fish. Ontogenetic changes in feeding and growth, and the impacts of abiotic and biotic factors on vital rates are discussed with particular emphasis on the role of temperature as a constraint to life-history scheduling of this species in the Baltic Sea. A combination of field and laboratory data suggests that optimal thermal windows for growth and survival change during early life and are wider for eggs (5–17 °C) than in young (8- to 12-mm) early feeding larvae (5–12 °C). As larvae become able to successfully capture larger prey, thermal windows expand to include warmer waters. For example, 12- to 16-mm larvae can grow well at 16 °C and larger, transitional-larvae and early juveniles display the highest rates of feeding and growth at ∼18–22 °C. Gaps in knowledge are identified including the need for additional laboratory studies on the physiology and behavior of larvae (studies that will be particularly critical for biophysical modeling activities) and research addressing the role of overwinter survival as a factor shaping phenology and setting limits on the productivity of this species in areas located at the northern limits of its latitudinal range (such as the Baltic Sea). Based on stage- and temperature-specific mortality and growth potential of early life stages, our analysis suggests that young-of-the year sprat would benefit from inhabiting warmer, near-shore environments rather than the deeper-water spawning grounds such as the Bornholm Basin (central Baltic Sea). Utilization of warmer, nearshore waters (or a general increase in Baltic Sea temperatures) is expected to accelerate growth rates but also enhance the possibility for density-dependent regulation of recruitment (e.g., top-down control of zooplankton resources) acting during the late-larval and juvenile stages, particularly when sprat stocks are at high levels. Highlights ► Field, laboratory and modeling research on the ecophysiology of all sprat life stages is summarized. ► Environmental factors influencing growth and survival are revealed. ► Ontogenetic changes in thermal tolerance and prey requirements constrain life cycle scheduling. ► Gaps in knowledge are identified and future research efforts recommended on sprat recruitment dynamics. ► Exploring seasonal energy allocation will allow a mechanistic understanding of climate impacts.
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    The spatial dimension of climate-driven temperature change in the Baltic Sea and its implication for cod and sprat early life stage survival (2012)
    Elsevier
    In:  Journal of Marine Systems, 100-101 . pp. 1-8.
    Details
    Publication Date: 2019-09-23
    Description: Throughout the last decades there has been a world-wide, general warming trend. In this study, we use the example of the Baltic Sea to resolve the overall estimated temperature trend into smaller, meso-scale spatial units. Afterwards, we investigate the spatially resolved potential impact of the temperature trend on larval survival for two important fish species, cod and sprat. We used two different sets of hydrographic data: (i) long-term temporally and depth-resolved data measured in situ originating from one geographic position and (ii) long-term horizontally resolved data, originating from a circulation model. In contrast to basin-wide integrated results, our modelling approach revealed different results related to smaller spatial scales. In shallow and coastal areas non-significant long-term temperature trends were observed. In some cases even decreasing temperature trends were found. Average distribution maps (1973–2010) of cod and sprat eggs and larvae confirmed the higher importance of central, deep basins as nursery grounds. Applying the temperature trends when calculating cod larval window of opportunity values, resulted in decreased durations of 1–3 days (~ 3–13%) in most areas. Sprat larval window of opportunity values mainly increased up to 4 days (~ 45%), indicating a potential reproduction advantage of sprat over cod under anticipated future temperature increase. Highlights ► We resolve the overall positive temperature trend in the Baltic into meso-scale spatial units and investigate the impact on larval survival for two important fish species, cod and sprat. ► In shallow and coastal areas non-significant or even negative temperature trends occurred. ► Cod larval window of opportunity values decreased by 1–3 days (~ 3–13%). ► Sprat larval window of opportunity values increased up to 4 days (~ 45%). ► Sprat will have a reproduction advantage over cod under anticipated future temperature change.
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    Timing of trap formation and petroleum generation in the northern East China Sea Shelf Basin (2012)
    Elsevier
    In:  Marine and Petroleum Geology, 36 . pp. 154-163.
    Details
    Publication Date: 2017-07-26
    Description: Basin modeling and cross-section restoration from the northern East China Sea Shelf Basin reveal the timing of trap formation and petroleum generation. Cross-section restoration suggest that extension started in the Late Cretaceous and was interrupted by inversion at the end of Miocene that created large anticline structures, providing numerous petroleum traps. One-dimensional basin modeling of the JDZ-VII-I well show that the main phase of oil generation in the synrift fluvial shales in the Jeju Basin occurred during the Early Oligocene–middle Miocene period, predating the regional inversion. Thus, potential for large oil accumulations in the southern part of the basin is probably limited. Most of the petroleum are likely to have flowed toward the basin margin as well as basin center until the Late Miocene because no structures were available to capture them. The formation of anticline structures overlapped and/or postdated the main phase of gas generation in the Jeju Basin. This is probably why the JDZ-VII-1 is gas-prone with the gas trapped mainly in the anticlinal structures formed by the tectonic uplift. The source rocks in the southwestern part of the Domi Basin are immature for petroleum generation.
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    Authigenic Pb isotopes from the Laurentian Fan: Changes in chemical weathering and patterns of North American freshwater runoff during the last deglaciation (2010)
    Elsevier
    In:  Earth and Planetary Science Letters, 299 (3-4). pp. 458-465.
    Details
    Publication Date: 2013-05-15
    Description: Climate-dependent chemical weathering trends have a strong impact on the dissolved Pb isotopic composition of continental runoff during glacial terminations, so that this tracer can be used to reconstruct the impact of the North American deglaciation on aspects of freshwater runoff and ocean chemistry. Here we present authigenic Fe–Mn oxyhydroxide-derived Pb isotope records from lower Laurentian Fan sediments that trace the local deglacial continental runoff signal through the Gulf of St. Lawrence. We use these records to investigate changes in the Pb isotopic composition of the North American runoff, and their relationship to deglacial processes. The new Pb isotope records are very similar to those from the subtropical deep NW Atlantic locations, though the new data are at higher resolution and exhibit much greater amplitudes of change due to their Laurentide Ice Sheet-proximal setting. Unradiogenic compositions (206Pb/204Pb as low as 18.8 at 18.5 ka) during the latest glacial change towards highly radiogenic compositions during the early Holocene (206Pb/204Pb = 20.1 at 11.2 ka). Late Holocene 206Pb/204Pb values return to intermediate values around 206Pb/204Pb = 19.6. These new data support previous inferences that the Pb isotopic composition of the deep Atlantic is controlled during deglaciation by changes in the pattern and intensity of continental chemical weathering. In more detail, the most significant change in the entire Pb isotope record starts at 12.5 ka and lasts until about 11 ka. This observation, of strong Pb isotopic changes across a climatically cold period in the North Atlantic region, suggests that at this location Pb isotopic compositions recorded in deep marine authigenic Fe–Mn oxyhydroxides not only trace deglacial changes in chemical weathering intensity but also highly depend on major freshwater runoff routes in interior North America. Our data suggest a gradual opening of the eastward freshwater runoff route in the course of the Younger Dryas.
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    Reduced inflammatory response to Aeromonas salmonicida infection in common carp (Cyprinus carpio L.) fed with β-glucan supplements (2012)
    Elsevier
    In:  Fish & Shellfish Immunology, 32 (6). pp. 1051-1057.
    Details
    Publication Date: 2020-07-31
    Description: The objective of the present study was to determine the action of beta-glucans as feed additives on the gene expression profile of some inflammatory-related cytokines from common carp (Cyprinus carpio L) during the early stages of a non-lethal bacterial infection with Aeromonas salmonicida. beta-glucan (MacroGard (R)), was administered daily to carp (6 mg per kg body weight) in the form of supplemented commercial food pellets for 14 days prior to infection. Control and treated fish were then intraperitoneally injected with PBS or 4 x 10(8) bacteria per fish and were sampled at time 0 and 6 h, 12 h, I day, 3 days and 5 days post-injection. Head kidney and gut were collected and the gene expression patterns for tnf alpha 1, tnf alpha 2, il1 beta, il6 and il10 were analyzed by quantitative PCR. Results obtained showed that treatment with beta-glucans generally down-regulated the expression of all measured genes when compared to their corresponding controls. After injection, highest changes in the gene expression levels were obtained at 6 h: particularly, in head kidney there was higher up-regulation of tnfa1 and tnfa2 in infected fish fed beta-glucans in comparison to control feed: however, in gut there was a significant down-regulation of tnf alpha 1, tnf alpha 2, il1 beta and il6 in infected fish fed beta-glucans. Analysis of carp specific antibodies against A. salmonicida 30 days after injection revealed their levels were reduced in the infected beta-glucan group. In conclusion, a diet supplemented with beta-glucan (MacroGard (R)) reduced the gene expression levels of some inflammation-related cytokines in common carp. Such a response appears to be dependent of organ studied and therefore the immunostimulant may be preventing an acute and potential dangerous response in gut, whilst enhancing the inflammatory response in head kidney when exposed to A. salmonicida
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    History of climate modeling (2010)
    Wiley
    In:  Wiley Interdisciplinary Reviews: Climate Change, 2 (1). pp. 128-139.
    Details
    Publication Date: 2016-02-23
    Description: The history of climate modeling begins with conceptual models, followed in the 19th century by mathematical models of energy balance and radiative transfer, as well as simple analog models. Since the 1950s, the principal tools of climate science have been computer simulation models of the global general circulation. From the 1990s to the present, a trend toward increasingly comprehensive coupled models of the entire climate system has dominated the field. Climate model evaluation and intercomparison is changing modeling into a more standardized, modular process, presenting the potential for unifying research and operational aspects of climate science
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    Measuring the geotherm with gas hydrate bottom-simulating reflectors: a novel approach using three-dimensional seismic data from the eastern Black Sea (2010)
    Wiley
    In:  Terra Nova, 22 (2). pp. 131-136.
    Details
    Publication Date: 2016-04-18
    Description: Gas hydrate-related bottom-simulating reflectors mark the phase boundary between hydrate and free gas in the subsurface, and therefore may be used to estimate geothermal gradients and hence heat flow. The depth and temperature of the phase boundary depend on the composition of the hydrateforming gas and of the pore fluid. In the absence of direct sampling, these compositions remain unknown. We develop an alternative approach that is less sensitive to compositional uncertainties and can be applied when the bottom-simulating reflector is densely sampled in a region with significant seabed relief. We apply this approach to a three-dimensional seismic dataset from the eastern Black Sea.
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    Deformation and ultrafine dynamic recrystallization of quartz in pseudotachylyte-bearing brittle faults: A matter of a few seconds (2012)
    Elsevier
    In:  Journal of Structural Geology, 38 . pp. 21-38.
    Details
    Publication Date: 2016-03-03
    Description: Tectonic pseudotachylytes, i.e. quenched friction-induced silicate melts, record coseismic slip along faults and are mainly reported from the brittle crust in association with cataclasites. In this study, we document the occurrence of recrystallization of quartz to ultrafine-grained (grain size 1–2 μm) aggregates along microshear zones (50–150 μm thick) in the host rock adjacent to pseudotachylytes from two different faults within quartzite (Schneeberg Normal Fault Zone, Eastern Alps), and tonalite (Adamello fault, Southern Alps) in the brittle crust. The transition from the host quartz to microshear zone interior includes: (i) formation of high dislocation densities; (ii) fine (0.3–0.5 μm) polygonization to subgrains defined by disordered to well-ordered dislocation walls; (iii) development of a mosaic aggregate of dislocation-free new grains. The crystallographic preferred orientation (CPO) of quartz towards the microshear zone shows a progressive misorientation from the host grain, by subgrain rotation recrystallization, to a nearly random CPO possibly related to grain boundary sliding. These ultrafine aggregates appear to be typically associated with pseudotachylytes in nature. We refer the crystal plastic deformation of quartz accompanied by dramatic grain size refinement to the coseismic stages of fault slip due to high differential stress and temperature transients induced by frictional heating. Microshear zones localized on precursory fractures developed during the stages of earthquake rupture propagation and the very initial stages of fault slip. Thermal models indicate that the process of recrystallization, including recovery processes, occurred in a time lapse of a few tens of seconds.
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    How does dynamical spatial variability impact 234Th-derived estimates of organic export? (2012)
    Elsevier
    In:  Deep-Sea Research Part I-Oceanographic Research Papers, 68 . pp. 24-45.
    Details
    Publication Date: 2014-12-08
    Description: In this study we first evaluate the small-scale spatial variability of particulate export, using a set of synoptic thorium-234 activity observations sampled within a one-degree radius. These data show significant variability of surface thorium activity on scales of the order of 100 km (∼270–550 dpm m−3). This patchiness of export potentially affects the robustness of point observations and our interpretation of them. Motivated by these observations we subsequently couple an explicit model of thorium-234 dynamics to a coupled physical–biogeochemical basin model capable of resolving these small-scales. The model supports the observations in displaying marked thorium variability on spatial scales of the order of 100 km and smaller, with highest values in the regions of large eddy kinetic energy and large primary productivity. The model is also used to quantify the impact of small-scale variability on export estimates. Our model shows that the primary source of error associated with the presence of small-scale spatial variability is related to the standard assumptions of steady state and non-steady state (〉40% during bloom condition). The non-steady state method can misinterpret variations due to patchiness in thorium activity as temporal changes and lead to errors larger than those introduced by the simpler steady state approach. We show that the non-steady state approach could improve the flux estimates in some cases if the sampling was conducted in a Lagrangian framework. Undersampling the spatial variability results in further bias (〉20%) that can be reduced when the sampling density is increased. Finally, errors due to the dynamical transport of thorium associated with small-scale structures are relatively low (〈20%) except in regions of high eddy kinetic energy.
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    Benthic respiration in a novel seep habitat dominated by dense beds of ampharetid polychaetes at the Hikurangi Margin (New Zealand) (2010)
    Elsevier
    In:  Marine Geology, 272 (1/4). pp. 223-232.
    Details
    Publication Date: 2017-08-08
    Description: Many biological seep studies focused on the distribution, structure, nutrition and food web architecture of seep communities as well as on their interaction with the seep geochemistry. However, overall respiration at cold seeps received only little attention. We conducted in-situ oxygen flux measurements in combination with ex-situ oxygen micro-profiles, respiration measurements, as well as rate determinations of microbial methane and sulfate turnover to assess respiration pathways as well as carbon turnover at a seep habitat that was recently discovered alongside the Hikurangi Margin offshore northern New Zealand. This habitat is dominated by dense beds of tube-building, heterotrophic ampharetid polychaetes. Average total oxygen uptake (TOU) from this habitat was very high (83.7 mmol m− 2 day− 1). TOU at a non-seep reference site ranged between 2.7 and 5.8 mmol m− 2 day− 1. About 37% (30.8 mmol m− 2 day− 1) of the average TOU was consumed by ampharetids. Considering mean diffusive oxygen uptake (8.5 mmol m− 2 day− 1) the remaining fraction of ~ 53% of the TOU (44.4 mmol m− 2 day− 1) might be explained by respiration of epibenthic organisms as well as aerobic methane and sulfide oxidation at the sediment–water interface. The strongly negative carbon isotopic signatures (− 52.9 ± 5‰ VPDB) of the ampharetid tissues indicate a methane derived diet. However, carbon production via anaerobic oxidation of methane (AOM) was too low (0.1 mmol C m− 2 day− 1) to cover the mean carbon demand of the ampharetid communities (21 mmol C m− 2 day− 1). Likely, organic carbon generated via aerobic methane oxidation represents their major carbon source. This is in contrast to other seep habitats, where energy bound in methane is partly transferred to sulfide via AOM and finally consumed by sulfide-oxidizing chemoautotrophs providing carbon that subsequently enters the benthic food web.
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    Paternally derived immune priming for offspring in the red flour beetle, Tribolium castaneum (2010)
    Wiley
    In:  Journal of Animal Ecology, 79 (2). pp. 403-413.
    Details
    Publication Date: 2017-06-09
    Description: Summary 1. Parasitized females in mammals, fish and birds can enhance the immune defence of their offspring by transferring specific antibodies for the embryo. Likewise, social insect mothers transfer immunity despite the fact that invertebrates lack antibodies. 2.  Female trans-generational immune priming is consistent with parental investment theory, because mothers invest more into rearing their offspring than fathers. However, when immune priming is not directly linked to parental care, as is often the case in insects that abandon their eggs after oviposition, both sexes might benefit from protecting their offspring. 3. Using the red flour beetle, Tribolium castaneum, we show that after parental exposure to heat-killed bacteria, trans-generational immune priming occurs through fathers as well as mothers. 4. This novel finding challenges the traditional view that males provide only genes to their offspring in species without paternal care, and raises the possibility of a division of tasks with respect to immune protection between parents.
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    Flux comparison of Eulerian and Lagrangian estimates of Agulhas leakage: A case study using a numerical model (2010)
    Elsevier
    In:  Deep Sea Research Part I: Oceanographic Research Papers, 57 (3). pp. 319-327.
    Details
    Publication Date: 2019-09-23
    Description: Estimating the magnitude of Agulhas leakage, the volume flux of water from the Indian to the Atlantic Ocean, is difficult because of the presence of other circulation systems in the Agulhas region. Indian Ocean water in the Atlantic Ocean is vigorously mixed and diluted in the Cape Basin. Eulerian integration methods, where the velocity field perpendicular to a section is integrated to yield a flux, have to be calibrated so that only the flux by Agulhas leakage is sampled. Two Eulerian methods for estimating the magnitude of Agulhas leakage are tested within a high-resolution two-way nested model with the goal to devise a mooring-based measurement strategy. At the GoodHope line, a section halfway through the Cape Basin, the integrated velocity perpendicular to that line is compared to the magnitude of Agulhas leakage as determined from the transport carried by numerical Lagrangian floats. In the first method, integration is limited to the flux of water warmer and more saline than specific threshold values. These threshold values are determined by maximizing the correlation with the float-determined time series. By using the threshold values, approximately half of the leakage can directly be measured. The total amount of Agulhas leakage can be estimated using a linear regression, within a 90% confidence band of 12 Sv. In the second method, a subregion of the GoodHope line is sought so that integration over that subregion yields an Eulerian flux as close to the float-determined leakage as possible. It appears that when integration is limited within the model to the upper 300 m of the water column within 900 km of the African coast the time series have the smallest root-mean-square difference. This method yields a root-mean-square error of only 5.2 Sv but the 90% confidence band of the estimate is 20 Sv. It is concluded that the optimum thermohaline threshold method leads to more accurate estimates even though the directly measured transport is a factor of two lower than the actual magnitude of Agulhas leakage in this model.
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    Age and geochemistry of volcanic rocks from the Hikurangi and Manihiki oceanic Plateaus (2010)
    Elsevier
    In:  Geochimica et Cosmochimica Acta, 74 (24). pp. 7196-7219.
    Details
    Publication Date: 2020-10-21
    Description: Here we present the first radiometric age data and a comprehensive geochemical data set (including major and trace element and Sr–Nd–Pb–Hf isotope ratios) for samples from the Hikurangi Plateau basement and seamounts on and adjacent to the plateau obtained during the R/V Sonne 168 cruise, in addition to age and geochemical data from DSDP Site 317 on the Manihiki Plateau. The 40Ar/39Ar age and geochemical data show that the Hikurangi basement lavas (118–96 Ma) have surprisingly similar major and trace element and isotopic characteristics to the Ontong Java Plateau lavas (ca. 120 and 90 Ma), primarily the Kwaimbaita-type composition, whereas the Manihiki DSDP Site 317 lavas (117 Ma) have similar compositions to the Singgalo lavas on the Ontong Java Plateau. Alkalic, incompatible-element-enriched seamount lavas (99–87 Ma and 67 Ma) on the Hikurangi Plateau and adjacent to it (Kiore Seamount), however, were derived from a distinct high time-integrated U/Pb (HIMU)-type mantle source. The seamount lavas are similar in composition to similar-aged alkalic volcanism on New Zealand, indicating a second wide-spread event from a distinct source beginning ca. 20 Ma after the plateau-forming event. Tholeiitic lavas from two Osbourn seamounts on the abyssal plain adjacent to the northeast Hikurangi Plateau margin have extremely depleted incompatible element compositions, but incompatible element characteristics similar to the Hikurangi and Ontong Java Plateau lavas and enriched isotopic compositions intermediate between normal mid-ocean-ridge basalt (N-MORB) and the plateau basement. These younger (not, vert, similar52 Ma) seamounts may have formed through remelting of mafic cumulate rocks associated with the plateau formation. The similarity in age and geochemistry of the Hikurangi, Ontong Java and Manihiki Plateaus suggest derivation from a common mantle source. We propose that the Greater Ontong Java Event, during which not, vert, similar1% of the Earth’s surface was covered with volcanism, resulted from a thermo-chemical superplume/dome that stalled at the transition zone, similar to but larger than the structure imaged presently beneath the South Pacific superswell. The later alkalic volcanism on the Hikurangi Plateau and the Zealandia micro-continent may have been part of a second large-scale volcanic event that may have also triggered the final breakup stage of Gondwana, which resulted in the separation of Zealandia fragments from West Antarctica.
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  • 76
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    Sorbifuranones A–C, sorbicillinoid metabolites from Penicillium strains isolated from Mediterranean sponges (2010)
    Elsevier
    In:  Tetrahedron, 66 (52). pp. 9894-9901.
    Details
    Publication Date: 2019-01-24
    Description: Three novel natural products, sorbifuranones A–C (4–6), were isolated from a Penicillium chrysogenum fungus isolated from the marine sponge Ircinia fasciculata. Sorbifuranones B (5) and C (6) and 2′,3′-dihydrosorbicillin, a putative precursor to sorbifuranone B, were also found in the culture of another Penicillium strain, which was isolated from the sponge Tethya aurantium. Their constitutions were elucidated mainly by 2D NMR. NOE correlations in combination with quantum chemical calculations and comparison of experimental and calculated electronic circular dichroism (CD) spectra permitted assignment of the absolute configuration of sorbifuranone C. The structures hint at a two-step cleavage-cyclization sequence of sorbifuranone A (4) leading to the spiro compound sorbifuranone C, while sorbifuranone B is likely to be the respective cleavage product of a putative 2′,3′-dihydrosorbifuranone A, which cannot cyclize further.
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  • 77
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    Sub-littoral and supra-littoral amphipods respond differently to acute thermal stress (2010)
    Elsevier
    In:  Comparative Biochemistry and Physiology Part B: Biochemistry and molecular biology, 155 (4). pp. 413-418.
    Details
    Publication Date: 2020-08-04
    Description: Thermal tolerance was determined in two closely related amphipod species from contrasting environments (sub-littoral and supra-littoral zones of the sea) using HSP expression and the activity of antioxidant enzymes. The levels of HSP70 and small HSPs present in untreated control animals were higher in the supra-littoral Orchestia gammarellus than in the sub-littoral Gammarus oceanicus. Under the acute thermal stress, HSP levels increased less strongly in O. gammarellus than in G. oceanicus. Activities of antioxidant enzymes peroxidase, catalase and glutathione S-transferase, were more pronounced in the supra-littoral O. gammarellus then in the sub-littoral G. oceanicus. We conclude that the environmental temperature regime modifies key cellular defense mechanisms in amphipods. Higher levels of constitutive HSP synthesis and higher levels of antioxidant enzymes in the supra-littoral species likely reflects adaptation to this highly thermally variable environment.
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  • 78
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    Prospects for decadal climate prediction (2010)
    Wiley
    In:  Wiley Interdisciplinary Reviews: Climate Change, 1 (5). pp. 627-635.
    Details
    Publication Date: 2019-01-21
    Description: During the last decade, global surface temperatures did not increase as rapidly as in the preceding decades. Although relatively small compared to the observed centennial scale global warming, it has renewed interest in understanding and even predicting climate on time scales of decades, and sparked a community initiative on near‐term prediction that will feature in the fifth intergovernmental panel on climate change assessment report. Decadal prediction, however, is in its infancy, with only a few publications existing. This article has three aims. The first is to make the case for decadal prediction. Decadal fluctuations in global climate similar to that of recent decades were observed during the past century. Associated with large regional changes in precipitation and climate extremes, they are of socioeconomic importance. Climate models, which capture some aspects of observed decadal variability, indicate that such variations might be partly predictable. The second aim is to describe the major challenges to skilful decadal climate prediction. One is poor understanding of mechanisms of decadal climate variability, with climate models showing little agreement. Sparse observations in the past, particularly in the ocean, are also a limiting factor to developing and testing of initialization and prediction systems. The third aim is to stress that despite promising initial results, decadal prediction is in a highly experimental stage, and care is needed in interpreting results and utilizing data from such experiments. In the long‐term, decadal prediction has the potential to improve models, reduce uncertainties in climate change projections, and be of socioeconomic benefit. Copyright © 2010 John Wiley & Sons, Ltd.
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  • 79
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    Seismic imaging of gas conduits beneath seafloor seep sites in a shallow marine gas hydrate province, Hikurangi Margin, New Zealand (2010)
    Elsevier
    In:  Marine Geology, 272 (1/4). pp. 114-126.
    Details
    Publication Date: 2020-07-09
    Description: We present recently-acquired high-resolution seismic data and older lower-resolution seismic data from Rock Garden, a shallow marine gas hydrate province on New Zealand's Hikurangi Margin. The seismic data reveal plumbing systems that supply gas to three general sites where seeps have been observed on the Rock Garden seafloor: the ‘LM3’ sites (including LM3 and LM3-A), the ‘Weka’ sites (including Weka-A, Weka-B, and Weka-C), and the ‘Faure’ sites (including Faure-A, Faure-B, and Rock Garden Knoll). At the LM3 sites, seismic data reveal gas migration from beneath the bottom simulating reflection (BSR), through the gas hydrate stability zone (GHSZ), to two separate seafloor seeps (LM3 and LM3-A). Gas migration through the deeper parts of GHSZ below the LM3 seeps appears to be influenced by faulting in the hanging wall of a major thrust fault. Closer to the seafloor, the dominant migration pathways appear to occupy vertical chimneys. At the Weka sites, on the central part of the ridge, seismic data reveal a very shallow BSR. A distinct convergence of the BSR with the seafloor is observed at the exit point of one of the Weka seep locations (Weka-A). Gas supply to this seep is predicted to be focused along the underside of a permeability contrast at the BGHS caused by overlying gas hydrates. The Faure sites are associated with a prominent arcuate slump feature. At Faure-A, high-amplitude reflections, extending from a shallow BSR towards the seafloor, are interpreted as preferred gas migration pathways that exploit relatively-high-permeability sedimentary layers. At Faure-B, we interpret gas migration to be channelled to the seep along the underside of the BGHS — the same scenario interpreted for the Weka-A site. At Rock Garden Knoll, gas occupies shallow sediments within the GHSZ, and is interpreted to migrate up-dip along relatively high-permeability layers to the area of seafloor seepage. We predict that faulting, in response to uplift and flexural extension of the ridge, may be an important mechanism in creating fluid flow conduits that link the reservoir of free gas beneath the BGHS with the shallow accumulations of gas imaged beneath Rock Garden Knoll. From a more regional perspective, much of the gas beneath Rock Garden is focused along a northwest-dipping fabric, probably associated with subduction-related deformation of the margin.
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  • 80
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    Focussed fluid flow on the Hikurangi Margin, New Zealand — Evidence from possible local upwarping of the base of gas hydrate stability (2010)
    Elsevier
    In:  Marine Geology, 272 (1/4). pp. 99-113.
    Details
    Publication Date: 2017-08-07
    Description: The southern Hikurangi Subduction Margin is characterized by significant accretion with predicted high rates of fluid expulsion. Bottom simulating reflections (BSRs) are widespread on this margin, predominantly occurring beneath thrust ridges. We present seismic data across the Porangahau Ridge on the outer accretionary wedge. The data show high-amplitude reflections above the regional BSR level. Based on polarity and reflection strength, we interpret these reflections as being caused by free gas. We propose that the presence of gas above the regional level of BSRs indicates local upwarping of the base of gas hydrate stability caused by advective heatflow from upward migrating fluids, although we cannot entirely rule out alternative processes. Simplified modelling of the increase of the thermal gradient associated with fluid flow suggests that funnelling of upward migrating fluids beneath low-permeability slope basins into the Porangahau Ridge would not lead to the pronounced thermal anomaly inferred from upwarping of the base of gas hydrate stability. Focussing of fluid flow is predicted to take place deep in the accretionary wedge and/or the underthrust sediments. Above the high-amplitude reflections, sediment reflectivity is low. A lack of lateral continuity of reflections suggests that reflectivity is lost because of a destruction of sediment layering from deformation rather than gas-hydrate-related amplitude blanking. Structural permeability from fracturing of sediments during deformation may facilitate fluid expulsion on the ridge. A gap in the BSR in the southern part of the study area may be caused by a loss of gas during fluid expulsion. We speculate that gaps in otherwise continuous BSRs that are observed beneath some thrusts on the Hikurangi Margin may be characteristic of other locations experiencing focussed fluid expulsion.
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  • 81
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    Tectonic and geological framework for gas hydrates and cold seeps on the Hikurangi subduction margin, New Zealand (2010)
    Elsevier
    In:  Marine Geology, 272 (1/4). pp. 26-48.
    Details
    Publication Date: 2017-08-08
    Description: The imbricated frontal wedge of the central Hikurangi subduction margin is characteristic of wide (ca. 150 km), poorly drained and over pressured, low taper (not, vert, similar 4°) thrust systems associated with a relatively smooth subducting plate, a thick trench sedimentary sequence (not, vert, similar 3–4 km), weak basal décollement, and moderate convergence rate (not, vert, similar 40 mm/yr). New seismic reflection and multibeam bathymetric data are used to interpret the regional tectonic structures, and to establish the geological framework for gas hydrates and fluid seeps. We discuss the stratigraphy of the subducting and accreting sequences, characterize stratigraphically the location of the interplate décollement, and describe the deformation of the upper plate thrust wedge together with its cover sequence of Miocene to Recent shelf and slope basin sediments. We identify approximately the contact between an inner foundation of deforming Late Cretaceous and Paleogene rocks, in which widespread out-of-sequence thrusting occurs, and a 65–70 km-wide outer wedge of late Cenozoic accreted turbidites. Although part of a seamount ridge is presently subducting beneath the deformation front at the widest part of the margin, the morphology of the accretionary wedge indicates that frontal accretion there has been largely uninhibited for at least 1–2 Myr. This differs from the offshore Hawkes Bay sector of the margin to the north where a substantial seamount with up to 3 km of relief has been subducted beneath the lower margin, resulting in uplift and complex deformation of the lower slope, and a narrow (10–20 km) active frontal wedge. Five areas with multiple fluid seep sites, referred to informally as Wairarapa, Uruti Ridge, Omakere Ridge, Rock Garden, and Builders Pencil, typically lie in 700–1200 m water depth on the crests of thrust-faulted, anticlinal ridges along the mid-slope. Uruti Ridge sites also lie in close proximity to the eastern end of a major strike-slip fault. Rock Garden sites lie directly above a subducting seamount. Structural permeability is inferred to be important at all levels of the thrust system. There is a clear relationship between the seeps and major seaward-vergent thrust faults, near the outer edge of the deforming Cretaceous and Paleogene inner foundation rocks. This indicates that thrust faults are primary fluid conduits and that poor permeability of the Cretaceous and Paleogene inner foundation focuses fluid flow to its outer edge. The sources of fluids expelling at active seep sites along the middle slope may include the inner parts of the thrust wedge and subducting sediments below the décollement. Within anticlinal ridges beneath the active seep sites there is a conspicuous break in the bottom simulating reflector (BSR), and commonly a seismically-resolvable shallow fault network through which fluids and gas percolate to the seafloor. No active fluid venting has yet been recognized over the frontal accretionary wedge, but the presence of a widespread BSR, an extensive protothrust zone (〉 200 km by 20 km) in the Hikurangi Trough, and two unconfirmed sites of possible previous fluid expulsion, suggest that the frontal wedge could be actively dewatering. There are presently no constraints on the relative fluid flux between the frontal wedge and the active mid-slope fluid seeps. Article Outline
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  • 82
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    Terminal velocities of pure and hydrate coated CO〈sub〉2〈\sub〉 droplets and CH〈sub〉4〈\sub〉 bubbles rising in a simulated oceanic environment (2010)
    Elsevier
    In:  Deep Sea Research Part I: Oceanographic Research Papers, 57 (9). pp. 1102-1110.
    Details
    Publication Date: 2016-11-01
    Description: Understanding the upward motion of CO2 droplets or CH4 bubbles in oceanic waters is prerequisite to predict the vertical distribution of the two most important greenhouse gases in the water column after these have been released from the seabed. One of the key parameters governing the fate of droplets or bubbles dissolving into the surrounding seawater as they rise, is the terminal velocity, uT. The latter is strongly influenced by the ability of both compounds to form skins of gas hydrate, if pressure and temperature satisfy thermodynamic framework conditions. Experimental efforts aiming to elucidate the rise properties of CO2 droplets and CH4 bubbles and specifically the influence of hydrate skins open the possibility to obtain a parameterization of uT applicable to both hydrate-coated and pure fluid particles of CH4 and CO2. With the present study, we report on experimentally determined terminal velocities of single CH4 bubbles released to pressurized and temperature-regulated seawater. Hydrate skins were identified by high bubble sphericities and changed motion characteristics. Based on these experiments as well as published data on the rise of hydrate-coated and pure liquid CO2 droplets and physical principles previously successfully used for clean bubbles near atmospheric pressures, a new parameterization of uT is proposed. Model predictions show a good agreement with the data base established from the laboratory-based measurements.
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  • 83
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    Serpentinization in the trench-outer rise region offshore of Nicaragua: constraints from seismic refraction and wide-angle data (2010)
    Wiley
    In:  Geophysical Journal International, 180 . pp. 1253-1264.
    Details
    Publication Date: 2019-09-23
    Description: Recent seismic evidence suggested that most oceanic plate hydration is associated with trench-outer rise faulting prior to subduction. Hydration at trenches may have a significant impact on the subduction zone water cycle. Previous seismic experiments conducted to the northwest of Nicoya Peninsula, Northern Costa Rica, have shown that the subducting Cocos lithosphere is pervasively altered, which was interpreted to be due to both hydration (serpentinization) and fracturing of the crustal and upper-mantle rocks. New seismic wide-angle reflection and refraction data were collected along two profiles, running parallel to the Middle American trench axis offshore of central Nicaragua, revealing lateral changes of the seismic properties of the subducting lithosphere. Seismic structure along both profiles is characterized by low velocities both in the crust and upper mantle. Velocities in the uppermost mantle are found to be in the range 7.3–7.5 km s−1; thus are 8–10 per cent lower than velocities typical for unaltered peridotites and hence confirm the assumption that serpentinization is a common process at the trench-outer rise area offshore of Nicaragua. In addition, a prominent velocity anomaly occurred within the crust beneath two seamounts. Here, velocity reduction may indicate increased porosity and perhaps permeability, supporting the idea that seamounts serve as sites for water percolation and circulation.
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  • 84
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    Structural evolution in accretionary prism toe revealed by magnetic fabric analysis from IODP NanTroSEIZE Expedition 316 (2010)
    Elsevier
    In:  Earth and Planetary Science Letters, 292 . pp. 221-230.
    Details
    Publication Date: 2017-02-21
    Description: This paper presents magnetic fabric analysis to examine the internal structure of the accretionary prism toe in the Nankai Trough, off the east coast of Japan. Two sites (C0006 and C0007) drilled during Integrated Ocean Drilling Program (IODP) Expedition 316 penetrated the sediment section, including intra wedge thrusts and the frontal thrust. Anisotropy of magnetic susceptibility (AMS) measurements provides insight into recorded strain during sedimentary and tectonic processes. Results from the upper part of the wedge show sedimentary acquired compaction fabric in general. In the lower part, AMS fabrics occasionally rotate almost ninety degrees and suggest horizontal compression. In contrast, magnetic fabrics did not show any correspondence to the thrusts or minor normal faults, which implies that those faults develop with concentrated shear deformation without disturbing surrounding sediments. Two adjacent drilling sites and dense sampling demonstrated clearly the change in strain field which is reported by previous studies. Based on these results, we propose a model of structural evolution at the toe of the prism. Underthrusting sediments induce horizontal stress in the lower part of the wedge, which reduces the effective stress and forms a high pore pressure anomaly and zones of fracturing. The frontal thrust is bent geometrically and terminates its activity in response to an increase of friction that triggers initiation of the next-generation frontal thrust. The upper part of the wedge tilts accordingly, resulting in an unstable slope.
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  • 85
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    Large-volume silicic volcanism in Kamchatka: Ar-Ar and U-Pb ages, isotopic, and geochemical characteristics of major pre-Holocene caldera-forming eruptions (2010)
    Elsevier
    In:  Journal of Volcanology and Geothermal Research, 189 (1/2). pp. 57-80.
    Details
    Publication Date: 2017-08-09
    Description: The Kamchatka Peninsula in far eastern Russia represents the most volcanically active arc in the world in terms of magma production and the number of explosive eruptions. We investigate large-scale silicic volcanism in the past several million years and present new geochronologic results from major ignimbrite sheets exposed in Kamchatka. These ignimbrites are found in the vicinity of morphologically-preserved rims of partially eroded source calderas with diameters from ∼ 2 to ∼ 30 km and with estimated volumes of eruptions ranging from 10 to several hundred cubic kilometers of magma. We also identify and date two of the largest ignimbrites: Golygin Ignimbrite in southern Kamchatka (0.45 Ma), and Karymshina River Ignimbrites (1.78 Ma) in south-central Kamchatka. We present whole-rock geochemical analyses that can be used to correlate ignimbrites laterally. These large-volume ignimbrites sample a significant proportion of remelted Kamchatkan crust as constrained by the oxygen isotopes. Oxygen isotope analyses of minerals and matrix span a 3‰ range with a significant proportion of moderately low-δ18O values. This suggests that the source for these ignimbrites involved a hydrothermally-altered shallow crust, while participation of the Cretaceous siliceous basement is also evidenced by moderately elevated δ18O and Sr isotopes and xenocryst contamination in two volcanoes. The majority of dates obtained for caldera-forming eruptions coincide with glacial stages in accordance with the sediment record in the NW Pacific, suggesting an increase in explosive volcanic activity since the onset of the last glaciation 2.6 Ma. Rapid changes in ice volume during glacial times and the resulting fluctuation of glacial loading/unloading could have caused volatile saturation in shallow magma chambers and, in combination with availability of low-δ18O glacial meltwaters, increased the proportion of explosive vs effusive eruptions. The presented results provide new constraints on Pliocene–Pleistocene volcanic activity in Kamchatka, and thus constrain an important component of the Pacific Ring of Fire.
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  • 86
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    Controls on the 129I/I ratio of deep-seated marine interstitial fluids: 'Old' organic versus fissiogenic 129-iodine (2010)
    Elsevier
    In:  Earth and Planetary Science Letters, 294 . pp. 27-36.
    Details
    Publication Date: 2019-09-23
    Description: Iodine and its radioisotope 129I have been successfully used to trace the origin of pore waters in submarine fluid escape structures because of their close association with organic material in deeply buried sediments. We report here halogen concentrations and 129I/I ratios for fluids of five mud volcanoes sampled along an E–W transect across the Gulf of Cadiz in the NE Atlantic Ocean. Concentrations of iodide and bromide increase consistently seaward accompanied by a decrease in 129I/I ratios from 6490 × 10− 15 to 663 × 10− 15. The exceptionally high 129I/I ratios at the near-shore locations reflect the presence of fissiogenic 129I, produced in situ by spontaneous fission of 238U within terrigenous sediments and released into pore water during clay mineral diagenetic processes. The observed 129I/I and halogen trends, together with similar changes in 87Sr/86Sr ratios, indicate a progressive seaward transition from inorganic-terrigenous to organic-marine fluid sources. Comparison of our results with literature data for varying geological settings reveals a general relationship between fissiogenic 129I, radiogenic 87Sr and the lithology or provenance of rocks and sediments, respectively. While 129I/I ratios in continental rock-hosted aquifers and terrigenous sedimentary systems are dominated by in situ production of fissiogenic 129I, iodine isotopes in oceanic settings or volcanogenic marine sediments reflect the release of ‘old’ iodine from deeply buried organic matter. The Gulf of Cadiz represents the full transition between these continental and oceanic 129I/I and 87Sr/86Sr end members. This is the first systematic investigation of fissiogenic 129I production in marine sedimentary environments.
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  • 87
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    Lithium isotope geochemistry of marine pore waters: Insights from cold seep fluids (2010)
    Elsevier
    In:  Geochimica et Cosmochimica Acta, 74 . pp. 3459-3475.
    Details
    Publication Date: 2019-09-23
    Description: Lithium concentration and isotope data (δ7Li) are reported for pore fluids from 18 cold seep locations together with reference fluids from shallow marine environments, a sediment-hosted hydrothermal system and two Mediterranean brine basins. The new reference data and literature data of hydrothermal fluids and pore fluids from the Ocean Drilling Program follow an empirical relationship between Li concentration and δ7Li (δ7Li = −6.0(±0.3) · ln[Li] + 51(±1.2)) reflecting Li release from sediment or rocks and/or uptake of Li during mineral authigenesis. Cold seep fluids display δ7Li values between +7.5‰ and +45.7‰, mostly in agreement with this general relationship. Ubiquitous diagenetic signals of clay dehydration in all cold seep fluids indicate that authigenic smectite–illite is the major sink for light pore water Li in deeply buried continental margin sediments. Deviations from the general relationship are attributed to the varying provenance and composition of sediments or to transport-related fractionation trends. Pore fluids on passive margins receive disproportionally high amounts of Li from intensely weathered and transported terrigenous matter. By contrast, on convergent margins and in other settings with strong volcanogenic input, Li concentrations in pore water are lower because of intense Li uptake by alteration minerals and, most notably, adsorption of Li onto smectite. The latter process is not accompanied by isotope fractionation, as revealed from a separate study on shallow sediments. A numerical transport-reaction model was applied to simulate Li isotope fractionation during upwelling of pore fluids. It is demonstrated that slow pore water advection (order of mm a−1) suffices to convey much of the deep-seated diagenetic Li signal into shallow sediments. If carefully applied, Li isotope systematics may, thus, provide a valuable record of fluid/mineral interaction that has been inherited several hundreds or thousands of meters below the actual seafloor fluid escape structure.
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  • 88
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    Arctic ocean shelf-basin interaction: An active continental shelf CO2 pump and its impact on the degree of calcium carbonate solubility (2010)
    Elsevier
    In:  Deep Sea Research Part I: Oceanographic Research Papers, 57 (7). pp. 869-879.
    Details
    Publication Date: 2019-09-23
    Description: The Arctic Ocean has wide shelf areas with extensive biological activity including a high primary productivity and an active microbial loop within the surface sediment. This in combination with brine production during sea ice formation result in the decay products exiting from the shelf into the deep basin typically at a depth of about 150 m and over a wide salinity range centered around S not, vert, similar33. We present data from the Beringia cruise in 2005 along a section in the Canada Basin from the continental margin north of Alaska towards the north and from the International Siberian Shelf Study in 2008 (ISSS-08) to illustrate the impact of these processes. The water rich in decay products, nutrients and dissolved inorganic carbon (DIC), exits the shelf not only from the Chukchi Sea, as has been shown earlier, but also from the East Siberian Sea. The excess of DIC found in the Canada Basin in a depth range of about 50–250 m amounts to 90±40 g C m−2. If this excess is integrated over the whole Canadian Basin the excess equals 320±140×1012 g C. The high DIC concentration layer also has low pH and consequently a low degree of calcium carbonate saturation, with minimum aragonite values of 60% saturation and calcite values just below saturation. The mean age of the waters in the top 300 m was calculated using the transit time distribution method. By applying a future exponential increase of atmospheric CO2 the invasion of anthropogenic carbon into these waters will result in an under-saturated surface water with respect to aragonite by the year 2050, even without any freshening caused by melting sea ice or increased river discharge.
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  • 89
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    Evaluation of gas hydrate deposits in an active seep area using marine controlled source electromagnetics: Results from Opouawe Bank, Hikurangi Margin, New Zealand (2010)
    Elsevier
    In:  Marine Geology, 272 (1-4). pp. 79-88.
    Details
    Publication Date: 2019-09-23
    Description: Several known gas seep sites along the Hikurangi Margin off the east coast of New Zealand were surveyed by marine controlled source electromagnetic (CSEM) experiments. A bottom-towed electric dipole–dipole system was used to reveal the occurrence of gas hydrate and methane related to the seeps. The experiments were part of the international multidisciplinary research program “New Vents” carried out on German R/V Sonne in 2007 (cruise SO191) to study key parameters controlling the release and transformation of methane from marine cold vents and shallow gas hydrate deposits. Two CSEM lines have been surveyed over known seep sites on Opouawe Bank in the Wairarapa region off the SE corner of the North Island. The data have been inverted to sub-seafloor apparent resistivity profiles and one-dimensional layered models. Clearly anomalous resistivities are coincident with the location of two gas seep sites, North Tower and South Tower on Opouawe Bank. A layer of concentrated gas hydrate within the uppermost 100 m below the seafloor is likely to cause the anomalous resistivities, but free gas and thick carbonate crusts may also play a role. Seismic data show evidence of fault related venting which may also indicate the distribution of gas hydrates and/or authigenic carbonate. Geochemical profiles indicate an increase of methane flux and the formation of gas hydrate in the shallow sediment section around the seep sites. Takahe is another seep site in the area where active venting, higher heat flow, shallow gas hydrate recovered from cores, and seismic fault planes, but only moderately elevated resistivities have been observed. The reasons could be a) the gas hydrate concentration is too low, even though methane venting is evident, b) strong temporal or spatial variation of the seep activity, and c) the thermal anomaly indicates rather temperature driven fluid expulsion that hampers the formation of gas hydrate beneath the vent.
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  • 90
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    Rapid 20th century warming in the Caribbean and impact of remote forcing on climate in the northern tropical Atlantic as recorded in a Guadeloupe coral (2010)
    Elsevier
    In:  Palaeogeography, Palaeoclimatology, Palaeoecology, 296 (1/2). pp. 111-124.
    Details
    Publication Date: 2020-08-07
    Description: We have generated 104-year long (1895–1999) monthly δ18O and Sr/Ca time series from a fast-growing Diploria strigosa coral core drilled off Guadeloupe Island, Lesser Antilles. Coral Sr/Ca reliably records interannual to decadal surface air temperature (SAT) variations in the region and shows a pronounced warming of approximately 1.5 °C since 1950, with the strongest warming (1.2 °C) occurring since 1975. This warming is also evident in SAT measured at Guadeloupe, which ends in 1951. Thus, our Sr/Ca series extends the air temperature record by 56 years. We find that the past few decades are the warmest years over the entire period of record. The accelerated warming since 1950 is accompanied by a pronounced decrease in regional precipitation. This dampens the warming signal indicated by coral δ18O, which is too low (only 0.7– 0.8 °C since 1951). Consistently, δ18Osw estimated from the coral proxies also shows a strong decrease since 1950. Our data suggest an inverse relationship between SAT and precipitation (i.e. warmer and drier) for the latter half of the 20th century with the strongest trends since the mid-1970s. This is consistent with recent observational and model data, which report that while over the tropical oceans rainfall has increased due to an increase in sea surface temperatures, precipitation over land regions is reduced. A continuation of this warming and drying trend over Caribbean land regions would have severe societal consequences, especially in the context of anthropogenic warming. The El Niño Southern-Oscillation (ENSO) and the North Atlantic Oscillation (NAO) are the two major climate modes affecting large-scale SST variability in the northern tropical Atlantic. Both Sr/Ca and δ18O show a close relationship to ENSO and the NAO. A quantitative comparison between extremes in mean March–May coral δ18O and the Nino3 and NAO indices imply that climate variability in the northern tropical Atlantic is mainly forced by tropical Pacific and North Atlantic variability. Spectral analysis suggests that the relative importance of ENSO and the NAO is frequency dependent, with ENSO dominating at interannual, and the NAO dominating at interdecadal time scales.
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  • 91
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    Widespread active seepage activity on the Nile Deep Sea Fan (offshore Egypt) revealed by high-definition geophysical imagery (2010)
    Elsevier
    In:  Marine Geology, 275 . pp. 1-19.
    Details
    Publication Date: 2017-08-08
    Description: Fluid escape structures on the Nile Deep Sea Fan were investigated during the MEDIFLUX MIMES expedition in 2004. Mud volcanoes, pockmarks and authigenic carbonate structures were surveyed for the first time with a high-resolution deep-towed 75 kHz sidescan sonar and a 2–8 kHz Chirp sediment echosounder. In combination with existing multibeam bathymetry and detailed seafloor in situ geological observations, these new data allowed detailed seep analyses. About 60 gas flares were detected acoustically in the water column from the sidescan sonar raw data atwater depths from 770 to 1700 m. These gas flares coincide at the seabed with 1) the centres of the mud volcanoes where mud is also extruded, 2) the borders of the mud volcanoes where the emitted gases contribute to the precipitation of authigenic carbonates, and 3) to the edges of broad sheets of authigenic carbonates. Subsurface sediments are commonly disturbed by ascending fluids throughout the delta, with an abundance of seep-related carbonate structures on the seafloor. The feeder channels below mud volcanoes, similar to the gas conduits below the widespread carbonate crust structures and pockmarks, are relatively narrow and, for the vast majority of them, do not exceed a few metres in diameter. The seeps on the Nile Deep Sea Fan clearly follow lineations on the seafloor that ee can relate to faults.
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  • 92
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    Margin architecture and seismic attenuation in the central Costa Rican forearc (2010)
    Elsevier
    In:  Marine Geology, 276 . pp. 30-41.
    Details
    Publication Date: 2017-08-08
    Description: Seismic attenuation across the central Costa Rican margin wedge is determined fromamplitude analysis ofwideangle seismic data. Travel time and amplitude modeling are applied to ocean bottom hydrophones along two trench-parallel profiles, located 30 km (P21) and 35 km (P18) landward of the deformation front northeast of Quepos Plateau. Tomographic inversion images a progressively thinning margin wedge from the coast to the lower slope at the trench. A 1–1.5 km thick décollement zone with seismic velocities of 3.5–4.5 km/s is sandwiched between the marginwedge and the subducting Cocos plate. For strike line P21, amplitude modeling indicates a Qp value of 50–150 for the upper margin wedge with seismic velocities ranging from 3.9 km/s to 4.9 km/s. Along strike line P18, Qp values of 50–150 are determined with velocities of 4.3–5.0 km/s in the upper margin wedge, increasing to 5.1–5.4 km/s in the lower margin wedge. Quantitative amplitude decay curves support the observed upper plate Qp values. In conjunction with earlier results from offshore Nicoya Peninsula, our study documents landward decreasing attenuation across the margin wedge, consistent with a change in lithology from the sediment-dominated frontal prism to the igneous composition of the forearc middle prism
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  • 93
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    Uplift at lithospheric swells-I: seismic and gravity constraints on the crust and uppermost mantle structure of the Cape Verde mid-plate swell (2010)
    Wiley
    In:  Geophysical Journal International, 182 (2). pp. 531-550.
    Details
    Publication Date: 2018-07-10
    Description: Wide-angle seismic data have been used to determine the velocity and density structure of the crust and uppermost mantle beneath the Cape Verdes mid-plate swell. Seismic modelling reveals a ‘standard’ oceanic crust, ∼8 km in thickness, with no direct evidence for low-density bodies at the base of the crust. Gravity anomaly modelling within the constraints and resolution provided by the seismic model, does not preclude, however, a layer of crustal underplate up to 3 km thick beneath the swell crest. The modelling shows that while the seismically constrained crustal structure accounts for the short-wavelength free-air gravity anomaly, it fails to fully explain the long-wavelength anomaly. The main discrepancy is over the swell crest where the gravity anomaly, after correcting for crustal structure, is higher by about 30 mGal than it is over its flanks. The higher gravity can be explained if the top 100 km of the mantle beneath the swell crest is less dense than its surroundings by 30 kg m−3. The lack of evidence for low densities and velocities in the uppermost mantle, and high densities and velocities in the lower crust, suggests that neither a depleted swell root or crustal underplate are the origin of the observed shallower-than-predicted bathymetry and that, instead, the swell is most likely supported by dynamic uplift associated with an anomalously low density asthenospheric mantle.
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  • 94
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    Does primary colonization or community structure determine the succession of fouling communities? (2010)
    Elsevier
    In:  Journal of Experimental Marine Biology and Ecology, 395 (1-2). pp. 10-20.
    Details
    Publication Date: 2017-07-11
    Description: Predicting the relevance of initial colonization and subsequent species interactions for succession in marine sessile communities is difficult because the effects of both factors depend on highly variable environmental processes (e.g. currents, topography, upwelling and others). Depending on the successional stage at which a new species arrives, it can either rapidly colonize in large numbers or its colonization success might be suppressed by resident species. In order to assess the roles of (i) initial colonization and (ii) subsequent species interactions on community development, we examined the succession of fouling assemblages that established on artificial substrata during two different seasonal periods, i.e. austral winter/spring and spring/summer. At 16 weeks of age communities that were initiated in different seasons varied significantly in composition and diversity. During each period (winter/spring and spring/summer), multispecies fouling consortia of different ages (hereafter termed “old” and “young”) were reciprocally transplanted between two neighbouring study sites and their succession was documented. After 8 weeks of transplantation communities of different ages maintained their differences in diversity even in the face of environmental change. However, during winter/spring the spreading of the dominant species P. chilensis caused more rapid convergence between all communities at both sites. During the spring/summer period, the high initial abundances of the weak competitor Bugula neritina led to the maintenance of differences between resident and transplanted assemblages within each site. Later colonizers, including the dominant competitor P. chilensis, however, could recruit onto B. neritina and started to spread in the communities. These results suggest that the early and intermediate succession of fouling communities in highly productive marine environments such as the Humboldt Current System is driven by the temporal and spatial variability of propagule supply, while the long-term stability of these communities depends on the identity of colonizers and their competitiveness.
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  • 95
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    Pathways and regulation of carbon, sulfur and energy transfer in marine sediments overlying methane gas hydrates on the Opouawe Bank (New Zealand) (2010)
    Elsevier
    In:  Geochimica et Cosmochimica Acta, 74 . pp. 5763-5784.
    Details
    Publication Date: 2017-09-27
    Description: This study combines sediment geochemical analysis, in situ benthic lander deployments and numerical modeling to quantify the biogeochemical cycles of carbon and sulfur and the associated rates of Gibbs energy production at a novel methane seep. The benthic ecosystem is dominated by a dense population of tube-building ampharetid polychaetes and conspicuous microbial mats were unusually absent. A 1D numerical reaction-transport model, which allows for the explicit growth of sulfide and methane oxidizing microorganisms, was tuned to the geochemical data using a fluid advection velocity of 14 cm yr−1. The fluids provide a deep source of dissolved hydrogen sulfide and methane to the sediment with fluxes equal to 4.1 and 18.2 mmol m−2 d−1, respectively. Chemosynthetic biomass production in the subsurface sediment is estimated to be 2.8 mmol m−2 d−1 of C biomass. However, carbon and oxygen budgets indicate that chemosynthetic organisms living directly above or on the surface sediment have the potential to produce 12.3 mmol m−2 d−1 of C biomass. This autochthonous carbon source meets the ampharetid respiratory carbon demand of 23.2 mmol m−2 d−1 to within a factor of 2. By contrast, the contribution of photosynthetically-fixed carbon sources to ampharetid nutrition is minor (3.3 mmol m−2 d−1 of C). The data strongly suggest that mixing of labile autochthonous microbial detritus below the oxic layer sustains high measured rates of sulfate reduction in the uppermost 2 cm of the sulfidic sediment (100–200 nmol cm−3 d−1). Similar rates have been reported in the literature for other seeps, from which we conclude that autochthonous organic matter is an important substrate for sulfate reducing bacteria in these sediment layers. A system-scale energy budget based on the chemosynthetic reaction pathways reveals that up to 8.3 kJ m−2 d−1 or 96 mW m−2 of catabolic (Gibbs) energy is dissipated at the seep through oxidation reactions. The microorganisms mediating sulfide oxidation and anaerobic oxidation of methane (AOM) produce 95% and 2% of this energy flux, respectively. The low power output by AOM is due to strong bioenergetic constraints imposed on the reaction rate by the composition of the chemical environment. These constraints provide a high potential for dissolved methane efflux from the sediment (12.0 mmol m−2 d−1) and indicates a much lower efficiency of (dissolved) methane sequestration by AOM at seeps than considered previously. Nonetheless, AOM is able to consume a third of the ascending methane flux (5.9 mmol m−2 d−1 of CH4) with a high efficiency of energy expenditure (35 mmol CH4 kJ−1). It is further proposed that bioenergetic limitation of AOM provides an explanation for the non-zero sulfate concentrations below the AOM zone observed here and in other active and passive margin sediments.
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  • 96
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    Tracing the effects of high-pressure metasomatic fluids and seawater alteration in blueschist-facies overprinted eclogites: Implications for subduction channel processes (2012)
    Elsevier
    In:  Chemical Geology, 292/293 . pp. 69-87.
    Details
    Publication Date: 2019-09-23
    Description: Eclogites from the Tian Shan high-pressure/low-temperature (HP/LT) metamorphic belt show evidence for successively increasing metasomatic alteration with increasing retrograde, blueschist-facies overprint. To constrain the source(s) of the metasomatizing fluid and to evaluate elemental and isotopic changes during this overprint, two sequences of eclogite-blueschist transitions were investigated: A layered transition from eclogite to blueschist (FTS 9–1 sequence) and blueschist-facies overprinted pillow metabasalts (FTS 4 samples). Geochemical trends based on the relationships of K, Ba, Rb and Th are consistent with HP metasomatism, but distinct from typical seafloor alteration trends. In contrast, oxygen isotope ratios in garnet (δ18OV-SMOW = 7.3–8.7‰) and omphacite (δ18OV-SMOW = 8.2–9.7‰) are similar to δ18OV-SMOW in bulk low-temperature altered oceanic crust (AOC), suggesting O isotopic preservation of a seafloor alteration signature. Carbonate crystallization related to the metasomatic overprint demonstrate CO2 mobility during subduction and potential C storage in HP metamorphic rocks. Carbon isotope ratios in the two sequences differ markedly: Disseminated calcite in the layered FTS 9–1 sequence has δ13CV-PDB = − 9.14 ± 0.19‰, whereas vein-forming ankerite in the pillow metabasalts has δ13CV-PDB = − 2.08 ± 0.12‰. The ankerite reflects an inorganic marine/hydrothermal signature, as observed in ophiolites, whereas the low δ13CV-PDB values from the calcite point to a contribution of organic carbon. The time when the metasomatic overprint occurred is estimated to be ~ 320 ± 11 Ma based on a Rb-Sr isochron age of six blueschist samples from the pillow metabasalts, which is in agreement with active subduction in this region. Initial (T = 320 Ma) 87Sr/86Sr ratios for all HP/LT rocks range from 0.7059 – 0.7085, and εNd320Ma varies from − 0.4 to + 10.9. Both eclogite-blueschist sequences have initial Sr isotope compositions (87Sr/86Sr ~ 0.707) that are significantly higher than those of typical oceanic mantle-derived basalts. They are thought to derive from a fluid that preserved the Sr isotopic signature of seawater by fluid-rock interaction with seawater-altered oceanic lithosphere in a subduction channel. Mixing models between eclogite and various fluids suggest that the contribution of a sediment-derived fluid was likely less than 20%. A fluid predominantly derived from seawater-altered oceanic lithosphere is also supported by the calculated O isotope composition of the fluids (10.2 – 11.2‰). It is thus evident that subduction channel fluids carry complex, mixed elemental and isotopic signatures, which reflect the composition of their source rocks modified by interaction with various other lithologies. Highlights ► Eclogites from the Tian Shan show blueschist-facies metasomatic overprint ► Fluid-induced metasomatism occurred at 320 ± 11 Ma ► Fluid predominantly derived from seawater-altered oceanic lithosphere ► Carbonates reflect C sequestration of mixture of organic and inorganic components
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  • 97
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    Towards an assessment of simple global marine biogeochemical models of different complexity (2010)
    Elsevier
    In:  Progress in Oceanography, 86 (3-4). pp. 337-360.
    Details
    Publication Date: 2019-09-23
    Description: We present a suite of experiments with a hierarchy of biogeochemical models of increasing complexity coupled to an offline global ocean circulation model based on the “transport matrix method”. Biogeochemical model structures range from simple nutrient models to more complex nutrient-phytoplankton–zooplankton-detritus-DOP models. The models’ skill is assessed by various misfit functions with respect to observed phosphate and oxygen distributions. While there is generally good agreement between the different metrics employed, an exception is a cost function based on the relative model-data misfit. We show that alterations in parameters and/or structure of the models – especially those that change particle export or remineralization profile – affect subsurface and mesopelagic phosphate and oxygen, particularly in the upwelling regions. Visual inspection of simulated biogeochemical tracer distributions as well as the evaluation of different cost functions suggest that increasing complexity of untuned, unoptimized models, simulated with parameters commonly used in large-scale model studies does not necessarily improve performance. Instead, variations in individual model parameters may be of equal, if not greater, importance.
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  • 98
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    Solubility of H2O and CO2-bearing fluids in tholeiitic basalts at pressures up to 500 MPa (2010)
    Elsevier
    In:  Chemical Geology, 277 (1/2). pp. 115-125.
    Details
    Publication Date: 2017-12-07
    Description: The solubility of H2O- and CO2-bearing fluids in tholeiitic basalts has been investigated experimentally at temperature of 1250 °C and pressures of 50, 100, 200, 300, 400 and 500 MPa. The concentrations of dissolved H2O and CO2 have been determined using FTIR spectroscopy with an accurate calibration of the absorption coefficients for hydrogen- and carbon-bearing species using synthesized standards of the same tholeiitic composition. The absorption coefficients are 0.65 ± 0.08 and 0.69 ± 0.08 L/(mol cm) for molecular H2O and OH groups by Near-Infrared (NIR), respectively, and 68 ± 10 L/(mol cm) for bulk H2O by Mid-Infrared (MIR). The carbonate groups determined by MIR have an absorption coefficient of 317 ± 23 L/(mol cm) for the band at 1430 cm−1.The solubility of H2O in the melt in equilibrium with pure H2O fluid increases from about 2.3 ± 0.12 wt.% at 50 MPa to about 8.8 ± 0.16 wt.% at 500 MPa, whereas the concentration of CO2 increases from about 175 ± 15 to 3318 ± 276 ppm in the melts which were equilibrated with the most CO2-rich fluids (with mole fraction of CO2 in the fluid, XflCO2, from 0.70 to 0.95). In melts coexisting with H2O- and CO2-bearing fluids, the concentrations of dissolved H2O and CO2 in basaltic melt show a non-linear dependence on both total pressure and mole fraction of volatiles in the equilibrium fluid, which is in agreement with previous studies. A comparison of new experimental data with existing numerical solubility models for mixed H2O–CO2 fluids shows that the models do not adequately predict the solubility of volatiles in basaltic liquids at pressures above 200 MPa, in particular for CO2, implying that the models need to be recalibrated. The experimental dataset presented in this study enables a quantitative interpretation of volatile concentrations in glass inclusions to evaluate the magma storage conditions and degassing paths of natural island arc basaltic systems. The experimental database covers the entire range of volatile compositions reported in the literature for natural melt inclusions in olivine from low- to mid-K basalts indicating that most melt inclusions were trapped or equilibrated at intermediate to shallow levels in magmatic systems (〈 12–15 km).
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  • 99
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    Methods for greenhouse gas offset accounting: A case study of ocean iron fertilization (2010)
    Elsevier
    In:  Ecological Economics, 69 (12). pp. 2495-2509.
    Details
    Publication Date: 2019-09-23
    Description: Reducing atmospheric carbon concentration by removing past emissions can extend our rapidly diminishing emission budgets corresponding to the target of limiting the temperature increase to 2 °C above preindustrial levels. Forestation measures to offset carbon emissions have already entered the Kyoto Protocol. Other carbon offset options like ocean iron fertilization or chemically enhanced weathering are currently being analyzed. The analysis and comparison of such options requires determination of the amount of carbon credits generated that can be used for compliance. In our analysis we assess the impact of various accounting methods applied to large-scale sink enhancement projects, taking into account the partly temporary storage characteristics arising from such projects. We apply the various accounting methods to hypothetical large-scale Southern Ocean iron fertilization projects for different durations. From an economic perspective, issuing temporary carbon credits would provide the largest number of carbon credits at an early stage. This is equivalent to the existing tCER regulation under the Kyoto Protocol. Issuing temporary carbon credits for short-term ocean iron fertilization would also benefit the environment, as all credits would have to be replaced in the next commitment period. As some carbon will be stored permanently, this reduces atmospheric carbon concentration.
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  • 100
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    Expanded view of the local-regional richness relationship by incorporating functional richness and time: a large-scale perspective (2010)
    Wiley
    In:  Global Ecology and Biogeography, 19 . pp. 875-885.
    Details
    Publication Date: 2018-10-10
    Description: Aim: We investigate the relationship between local and regional richness in marine fouling assemblages using an expanded and globally replicated approach by incorporating two dimensions of diversity (taxonomic and functional) and different successional stages. Location: Global. Methods: In eight different biogeographic regions (Australia, Brazil, Chile, England, Italy, Japan, Portugal and Sweden) 68 polyvinylchloride (PVC) panels (15 × 15 × 0.3 cm) were deployed for colonization. Communities colonizing panels were analysed by measuring percentage cover at each of four different successional ages: 2, 4, 6 and 8 months. Local richness was assessed as the average number of species and functional groups (FGs) per panel and regional richness was evaluated as the estimated (Jack2) asymptote of the sample-accumulation curves for species and FG on experimental panels. Results: We found that the shape of the relationship between local and regional richness depended on successional stage and the type of richness considered, i.e. taxonomic or functional richness. Hardly any relationship was detectable between local taxonomic richness and regional taxonomic richness at any successional stage. In contrast, the relation between local functional and regional functional richness shows a unimodal pattern of change during succession, passing through the stages ‘independent’, ‘unsaturated rising’, ‘saturated rising’ and once again ‘independent’. Main conclusions: The relationship between local and regional richness, whether taxonomic or functional, frequently displays independence of the two scales, particularly in early and late phases of the successional process.
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