ALBERT

Description: There are some active bottom currents on the northern continental slope of the South China Sea (SCS). Reflection seismic profiles show that the bottom current channels occur in the water depth range of 1000 to 2700 m, extending from the NE to the SW, leading to accumulation of discontinuous drifts with higher sedimentation rates on the eastern side of the channel. The stacking pattern of the layers suggests that these drifts propagated southwestward, following the direction of the bottom currents. One sedimentary drift to the southeast of the Dongsha Islands has the highest sedimentation rate of 97cm/ka in the last 12 ka. The sedimentary characteristics of the sediment layers indicate that these bottom currents are most likley caused by the water movement of a branch of the West Pacific Ocean Current, which enters the northern SCS via the Bashi Strait. Once formed, the bottom currents transport sediments along the northern slope of SCS southwestward and finally disappear into the central basin of the SCS. Due to the bottom current activity, the deep-sea sedimentary process in the northern SCS is complex.

Description: Cold-water coral carbonate mounds, owing their presence mainly to the framework building coral Lophelia pertusa and the activity of associated organisms, are common along the European margin with their spatial distribution allowing them to be divided into a number of mound provinces. Variation in mound attributes are explored via a series of case studies on mound provinces that have been the most intensely investigated: Belgica, Hovland, Pelagia, Logachev and Norwegian Mounds. Morphological variation between mound provinces is discussed under the premise that mound morphology is an expression of the environmental conditions under which mounds are initiated and grow. Cold-water coral carbonate mounds can be divided into those exhibiting “inherited” morphologies (where mound morphology reflects the morphology of the colonised features) and “developed” morphology (where the mounds assume their own gross morphology mainly reflecting dominant hydrodynamic controls). Finer-scale, surface morphological features mainly reflecting biological growth forms are also discussed.

Description: Sponges of warm- and temperate- but also cold-waters are known to synthesize structurally diverse primary and secondary metabolites. These compounds fulfill a variety of functions including adaptations of the cell membranes to environmental conditions. We show here that boreal sponges of the order Halichondrida are rich sources of brominated lipid fatty acids. The comparison of lipid compositions of halichondrid Demospongiae from boreal and warmer waters indicates an accumulation of brominated fatty acids in sponges from colder settings. Moreover, the spatial distribution of brominated fatty acids in the sponge tissue of one widely distributed sponge of the North-East Atlantic (Phakellia ventilabrum) hints to a function related to membrane fluidity and permeability rather than to defense against predation. However, brominated fatty acids are diagnostic for the presence of bromoperoxidases in sponges and may therefore be potentially useful as markers in a chemical screening for secondary metabolites of pharmacological interest.

Description: Two new compounds, 2, 3, 5-trimethyl-6-(3-oxobutan-2-yl)-4H-pyran-4-one (1) and (2R)-2, 3-dihydro-7-hydroxy-6, 8-dimethyl-2-[(E)-prop-1-enyl] chromen-4-one (2), together with six known compounds (3–8), were isolated from a deep-sea fungus, identified as Aspergillus sydowi, by a bioassay-guided method. Their structures were elucidated by spectroscopic methods and the cytotoxicities were evaluated by SRB method.

Description: Species of the genus Hysterothylacium are among the most common marine nematode fish parasites in the northern Atlantic. Due to recent findings of cryptic speciation in other parasitic ascaridoid nematodes, a similar pattern of sibling species was hypothesized also for Hysterothylacium aduncum. By investigating a 886- to 890-bp-long genomic DNA fragment including ITS-1, 5.8S rDNA and ITS-2 of 40 specimens of H. aduncum of sprat (Sprattus sprattus) of four different biogeographical regions (North Sea, English Channel, Bay of Biscay, Adriatic Sea), we could not detect significant genetic variability and therefore cryptic speciation. Nevertheless, while ITS-1 and 5.8S rDNA sequences were identical for all analysed specimens, ITS-2 sequences showed a population-specific pattern with the differentiation of an English Channel/Bay of Biscay group from a North Sea/Mediterranean Sea group.

Description: A stable and specific bacterial community was shown to be associated with the Mediterranean sponge Chondrilla nucula. The associated bacterial communities were demonstrated to be highly similar for all studied specimens regardless of sampling time and geographical region. In addition, analysis of 16S rDNA clone libraries revealed three constantly C. nucula-associated bacterial phylotypes belonging to the Acidobacteria, the Gamma- and Deltaproteobacteria present in sponge specimens from two Mediterranean regions with distinct water masses (Ligurian Sea and Adriatic Sea). For the first time, candidate division TM7 bacteria were found in marine sponges. A major part (79%) of the C. nucula-derived 16S rDNA sequences were closely related to other sponge-associated bacteria. Phylogenetic analysis identified 14 16S rRNA gene sequence clusters, seven of which consisted of exclusively sponge-derived sequences, whereas the other seven clusters contained additional environmental sequences. This study adds to a growing database on the stability and variability of microbial consortia associated with marine sponges.

Description: Mombacho is a deeply dissected volcano belonging to the Quaternary volcanic chain of Nicaragua. The southern, historic collapse crater (El Crater) currently hosts a fumarolic field with a maximum temperature of 121°C. Chemical and isotopic data from five gas-sampling field campaigns carried out in 2002, 2003 and 2005 highlight the presence of high-temperature gas components (e.g. SO2, HCl and HF), which indicate a significant contribution of juvenile magmatic fluids to the hydrothermal system feeding the gas discharges. This is strongly supported by the mantle-derived helium and carbon isotopic signatures, although the latter is partly masked by either a sedimentary subduction-related or a shallow carbonate component. The observed chemical and isotopic composition of the Mombacho fluids seems to indicate that this volcanic system, although it has not experienced eruptive events during the last centuries, can be considered active and possibly dangerous, in agreement with the geophysical data recorded in the region. Systematic geochemical monitoring of the fumarolic gas discharges, coupled with a seismic and ground deformation network, is highly recommended in order to monitor a possible new eruptive phase.

Description: We investigated the effect of commercially available enzymes (α-amylase, α-galactosidase, papain, trypsin, and lipase) as well as proteases from deep-sea bacteria on the larval attachment of the bryozoan Bugula neritina L. The 50% effective concentrations (EC50) of the commercial proteases were 10 times lower than those of other enzymes. Crude proteases from six deep-sea Pseudoalteromonas species significantly decreased larval attachment at concentrations of 0.03 to 1 mIU ml−1. The EC50 of the pure protease from the bacterium Pseudoalteromonas issachenkonii UST041101-043 was close to 1 ng ml−1 (0.1 mIU ml−1). The protease and trypsin individually incorporated in a water-soluble paint matrix inhibited biofouling in a field experiment. There are certain correlations between production of proteases by bacterial films and inhibition of larval attachment. None of the bacteria with biofilms that induced attachment of B. neritina produced proteolytic enzymes, whereas most of the bacteria that formed inhibitive biofilms produced proteases. Our investigation demonstrated the potential use of proteolytic enzymes for antifouling defense.

Description: We have applied the novel analytical method NanoSIMS to cephalopod statoliths for the first time in order to analyse their chemical microstructure, using a spatial resolution of 400 nm. This technique makes it possible to analyse in situ nano-scale chemical variations between increment layers. In statoliths of the boreoatlantic armhook squid Gonatus fabricii, we found distinct concentration patterns indicating a periodicity in strontium and sodium distributions. Sr and Na show a negative relation, both elements showing alternating patterns where the increments vary in width between approximately 1 and 5 μm. Results suggest, that aragonite deposited during the night is rich in Na and poor in Sr, while aragonite deposited during the day is rich in Sr and poor in Na. This study demonstrates the excellent suitability of NanoSIMS for nano-scale microchemical analyses of aragonite, providing new information on calcification processes and individual life histories. Possible future fields of application include not only cephalopod statoliths, but also virtually all biomineralized tissues in aquatic organisms like fish otoliths, gastropod statoliths, bivalve shells, foraminifers and corals.

Description: An indoor mesocosm system was set up to study the response of phytoplankton and zooplankton spring succession to winter and spring warming of sea surface temperatures. The experimental temperature regimes consisted of the decadal average of the Kiel Bight, Baltic Sea, and three elevated regimes with 2°C, 4°C, and 6°C temperature difference from that at baseline. While the peak of the phytoplankton spring bloom was accelerated only weakly by increasing temperatures (1.4 days per degree Celsius), the subsequent biomass minimum of phytoplankton was accelerated more strongly (4.25 days per degree Celsius). Phytoplankton size structure showed a pronounced response to warming, with large phytoplankton being more dominant in the cooler mesocosms. The first seasonal ciliate peak was accelerated by 2.1 days per degree Celsius and the second one by 2.0 days per degree Celsius. The over-wintering copepod populations declined faster in the warmer mesocosm, and the appearance of nauplii was strongly accelerated by temperature (9.2 days per degree Celsius). The strong difference between the acceleration of the phytoplankton peak and the acceleration of the nauplii could be one of the “Achilles heels” of pelagic systems subject to climate change, because nauplii are the most starvation-sensitive life cycle stage of copepods and the most important food item of first-feeding fish larvae.

Description: Shortly after the advent of the first imaging passive microwave sensor on board a research satellite an anomalous climate feature was observed within the Weddell Sea. During the years 1974–1976, a 250 × 103 km2 area within the seasonal sea ice cover was virtually free of winter sea ice. This feature, the Weddell Polynya, was created as sea ice formation was inhibited by ocean convection that injected relatively warm deep water into the surface layer. Though smaller, less persistent polynyas associated with topographically induced upwelling at Maud Rise frequently form in the area, there has not been a reoccurrence of the Weddell Polynya since 1976. Archived observations of the surface layer salinity within the Weddell gyre suggest that the Weddell Polynya may have been induced by a prolonged period of negative Southern Annular Mode (SAM). During negative SAM the Weddell Sea experiences colder and drier atmospheric conditions, making for a saltier surface layer with reduced pycnocline stability. This condition enables Maud Rise upwelling to trigger sustained deep-reaching convection associated with the polynya. Since the late 1970s SAM has been close to neutral or in a positive state, resulting in warmer, wetter conditions over the Weddell Sea, forestalling repeat of the Weddell Polynya. A contributing factor to the Weddell Polynya initiation may have been a La Niña condition, which is associated with increased winter sea ice formation in the polynya area. If the surface layer is made sufficiently salty due to a prolonged negative SAM period, perhaps aided by La Niña, then Maud Rise upwelling meets with positive feedback, triggering convection, and a winter persistent Weddell Polynya.

Description: Stable isotope signatures of primary producers display high inter- and intraspecific variation. This is assigned to species-specific differences in isotope fractionation and variable abiotic conditions, e.g., temperature, and nutrient and light availability. As consumers reflect the isotopic signature of their food source, such variations have direct impacts on the ecological interpretation of stable isotope data. To elucidate the variability of isotope fractionation at the primary producer level and the transfer of the signal through food webs, we used a standardised marine tri-trophic system in which the primary producers were manipulated while the two consumer levels were kept constant. These manipulations were (1) different algal species grown under identical conditions to address interspecific variability and (2) a single algal species cultivated under different nutrient regimes to address nutrient-dependent variability. Our experiments resulted in strong interspecific variation between different algal species (Thalassiosira weissflogii, Dunaliella salina, and Rhodomonas salina) and nutrient-dependent shifts in stable isotope signatures in response to nutrient limitation of R. salina. The trophic enrichment in 15N and 13C of primary and secondary consumers (nauplii of Acartia tonsa and larval herring) showed strong deviations from the postulated degree of 1.0‰ enrichment in δ13C and 3.4‰ enrichment in δ15N. Surprisingly, nauplii of A. tonsa tended to keep “isotopic homeostasis” in terms of δ15N, a pattern not described in the literature so far. Our results suggest that the diets’ nutritional composition and food quality as well as the stoichiometric needs of consumers significantly affect the degree of trophic enrichment and that these mechanisms must be considered in ecological studies, especially when lower trophic levels, where variability is highest, are concerned.

Description: Comparison of five deep-water coral (DWC)/mound ecosystems along the European Continental Margin shows that suspended particulate organic matter (sPOM), a potential food source, is lipid rich and of high quality. However, there are differences between the sites. The Darwin and Pelagia Mounds (N. Rockall Trough and N. Porcupine Bank, respectively) have higher proportions of labile particulate lipids (including high proportions of polyunsaturated fatty acids) in the benthic boundary layer than Logachev, Hovland and Belgica Mounds (Rockall Bank, S. Porcupine Bank and Porcupine Seabight, respectively). The high quality sPOM could be transported downslope from the euphotic zone. There is some evidence for inter-annual variability at some sites (e.g. Hovland and Logachev Mounds) as large differences in suspended lipid and particulate organic carbon concentrations were observed over the sampling period. Elevated total organic carbon contents of sediments at mound sites, relative to control sites in some cases (particularly Darwin Mounds), probably reflect local hydrodynamic control and the trapping of sPOM by the DWC. Fresh POM can be relatively rapidly transferred to significant depth (up to 8 cm) through bioturbation that is evident at all sites. There is no clear evidence of present day hydrocarbon seepage at any of the sites.

Description: In spite of the fundamental role the Atlantic Meridional Overturning Circulation (AMOC) plays for global climate stability, no direct current measurement of the Denmark Strait Overflow, which is the densest part of the AMOC, has been available until recently that resolve the cross-stream structure at the sill for long periods. Since 1999, an array of bottom-mounted acoustic instruments measuring current velocity and bottom-to-surface acoustic travel times was deployed at the sill. Here, the optimization of the array configuration based on a numerical overflow model is discussed. The simulation proves that more than 80% of the dense water transport variability is captured by two to three acoustic current profilers (ADCPs). The results are compared with time series from ADCPs and Inverted Echo Sounders deployed from 1999 to 2003, confirming that the dense overflow plume can be reliably measured by bottom-mounted instruments and that the overflow is largely geostrophically balanced at the sill.

Description: The experiment IGLOS (Investigation of the Greenland Boundary Layer Over Summit) was conducted in June and July 2002 in the central plateau of the Greenland inland ice. The German research aircraft Polar2, equipped with the turbulence measurement system Meteopod, was used to investigate turbulence and radiation flux profiles near research station “Summit Camp”. Aircraft measurements are combined with measurements of radiation fluxes and turbulent quantities made from a 50 m tower at Summit Camp operated by Eidgenössische Technische Hochschule (ETH) Zürich. During all six flight missions, well-developed stable boundary layers were found. Even in high-wind conditions, the surface inversion thickness did not exceed roughly 100 m. The turbulent height of the stable boundary layer (SBL) was found to be much smaller than the surface inversion thickness. Above the surface layer, significant turbulent fluxes occurred only intermittently in intervals on the order of a few kilometres. Turbulent event fraction in the upper SBL shows the same dependence on gradient Richardson number as reported for near-surface measurements. Clear-air longwave radiation divergence was always found to contribute significantly to the SBL heat budget. In low-wind cases, radiative cooling even turned out to be dominant.

Description: Methanogenic archaea from Siberian permafrost complementary to the already well-studied methanogens from non-permafrost habitats were exposed to simulated Martian conditions. After 22 days of exposure to thermo-physical conditions at Martian low- and mid-latitudes up to 90% of methanogenic archaea from Siberian permafrost survived in pure cultures as well as in environmental samples. In contrast, only 0.3%–5.8% of reference organisms from non-permafrost habitats survived at these conditions. This suggests that methanogens from terrestrial permafrost seem to be remarkably resistant to Martian conditions. Our data also suggest that in scenario of subsurface lithoautotrophic life on Mars, methanogenic archaea from Siberian permafrost could be used as appropriate candidates for the microbial life on Mars.

Description: In nature, multiple-species rather than single-species microbial associations with plant or animal (including human) hosts are the rule more than the exception. Prominent examples are the microbial consortia of vertebrate intestines and cattle rumen. As many demosponges are associated with enormous amounts of microorganisms, contributing up to 40-60% of the sponge biomass, they are excellent models for marine multi-species, microbe-host associations. Representatives of at least eight different phyla, many of which contain few or no cultivated representatives, have been identified as specific members of the sponge-associated microbiota. Recent studies show that vertical transmission of symbionts through the larval stages rather than horizontal acquisition from seawater appears to be an important mechanism by which the complex and possibly ancient microbial consortia of sponges are formed.

Description: Many sponge species contain large and diverse communities of microorganisms. Some of these microbes are suggested to be in a mutualistic interaction with their host sponges, but there is little evidence to support these hypotheses. Stable nitrogen isotope ratios of sponges in the Key Largo, Florida (USA) area grouped sponges into species with relatively low δ15N ratios and species with relatively high δ15N ratios. Using samples collected in June 2002 from Three Sisters Reef and Conch Reef in the Key Largo, Florida area, transmission electron microscopy (TEM) and denaturing gradient gel electrophoresis were performed on tissues of the sponges Ircinia felix and Aplysina cauliformis, which are in the low δ15N group, and on tissue of the sponge Niphates erecta, which is in the high δ15N group. Results showed that I. felix and A. cauliformis have large and diverse microbial communities, while N. erecta has a low biomass of one bacterial strain. As the low δ15N ratios indicated a microbial input of nitrogen, these results suggested that I. felix and A. cauliformis were receiving nitrogen from their associated microbial community, while N. erecta was obtaining nitrogen solely from external sources. Sequence analysis of the microbial communities showed a diversity of metabolic capabilities among the microbes of the low δ15N group, which are lacking in the high δ15N group, further supporting metabolic differences between the two groups. This research provides support for hypotheses of mutualisms between sponges and their associated microbial communities.

Description: The skeleton morphology of the azooxanthellate cold-water coral Lophelia pertusa can be strongly influenced by invasive boring sponges that infest corallites in the still living part of the colony. Atypically swollen corallites of live Lophelia pertusa from the Galway Mound (Belgica Carbonate Mound Province, Porcupine Seabight, NE Atlantic), heavily excavated by boring organisms, have been examined with a wide range of non-destructive and destructive methods: micro-computed tomography, macro- and microscopic observations of the outer coral skeleton, longitudinal and transversal thin sections and SEM analyses of coral skeleton casts. As a result, three excavating sponge species have been distinguished within the coral skeleton: Alectona millari, Spiroxya heteroclita and Aka infesta. Furthermore, four main coral/sponge growth stages have been recognised: (1) cylindrical juvenile corallite/no sponge cavities; (2) flared juvenile corallite/linear sponge cavities (if present); (3) slightly swollen adult corallites/chambered oval sponge cavities; (4) very swollen adult corallites/widespread cavities. The inferred correlation between corallite morphology and boring sponge infestation has been detected in micro-computed tomography (micro-CT) images and confirmed in sponge trace casts and peculiar features of coral skeleton microstructure.

Description: Cold-water coral carbonate mounds, owing their presence mainly to the framework building coral Lophelia pertusa and the activity of associated organisms, are common along the European margin with their spatial distribution allowing them to be divided into a number of mound provinces. Variation in mound attributes are explored via a series of case studies on mound provinces that have been the most intensely investigated: Belgica, Hovland, Pelagia, Logachev and Norwegian Mounds. Morphological variation between mound provinces is discussed under the premise that mound morphology is an expression of the environmental conditions under which mounds are initiated and grow. Cold-water coral carbonate mounds can be divided into those exhibiting “inherited” morphologies (where mound morphology reflects the morphology of the colonised features) and “developed” morphology (where the mounds assume their own gross morphology mainly reflecting dominant hydrodynamic controls). Finer-scale, surface morphological features mainly reflecting biological growth forms are also discussed.

Description: Sponges (Porifera) are filter feeders that take up microorganisms from seawater and digest them by phagocytosis. At the same time, many sponges are known to harbor massive consortia of symbiotic microorganisms, which are phylogenetically distinct from those in seawater, within the mesohyl matrix. In the present study, feeding experiments were performed to investigate whether phylogenetically different bacterial isolates, hereafter termed “food bacteria,” microbial seawater consortia, and sponge symbiont consortia are taken up and processed differently by the host sponge. Aplysina aerophoba retained high numbers of bacterial isolates and microbial seawater consortia with rates of up to 2.76 × 106 bacteria (g sponge wet weight)–1 h–1, whereas the retention of sponge symbionts was lower by nearly two orders of magnitude [5.37 × 104 bacteria (g sponge wet weight)−1 h–1]. In order to visualize the processing of a food bacterium within sponge tissues, the green fluorescent protein-labeled Vibrio strain MMW1, which had originally been isolated from A. aerophoba, was constructed. Incubation of this strain with A. aerophoba and subsequent visualization in tissue cryosections showed its presence in the choanocytes and/or endopinacocytes lining the canals but, unlike latex beads, not in deeper regions of the mesohyl, which suggests digestion of the bacteria upon contact with the host. Denaturing gradient gel electrophoresis (DGGE) was performed on the incubation seawater to monitor the changes in phylogenetic composition after incubation of the sponge with either seawater or sponge symbiont consortia. However, the DGGE experiment provided no evidence for selective processing of individual lineages by the host sponge. In conclusion, this study extends early studies by Wilkinson et al. (Proc R Soc London B 220:519–528, 1984) that sponges, here A. aerophoba, are able to differentiate between food bacteria and their own bacterial symbionts.

Description: The Caribbean sponge, Plakortis simplex, is known to contain a large array of secondary metabolites, including the antimalarial polyketide plakortin, several unusual glycolipids, and some hopanoids, which closely resemble typical bacterial metabolites. The hypothesis that they could be products of bacterial metabolism was tested by localizing specific metabolites in cells using physical separation of sponge cells, bacterial symbionts and supernatant by differential centrifugation. The obtained fractions were analysed separately for the typical P. simplex metabolites by NMR and mass spectrometry, and most of them were shown to be present in the bacterial cells but not in the sponge cells. In addition, PCR screening showed that the biosynthetic pathway for glycosphingolipids was present in the bacterial cells. Isolation of a Sphingomonas strain PS193 from P. simplex and subsequent glycosphingolipid analysis resulted in the detection of a known glycosphingolipid, GSL-1, that did, however, not match the glycosphingolipid profile of P. simplex. Therefore, it is unlikely that Sphingomonas strain PS193 is an abundant member of the microbial community associated with P. simplex. Other glycosphingolipid producing bacteria in P. simplex remain to be identified. In conclusion, this study provides experimental evidence that the glycolipids and hopanoids and possibly also the polyketide plakortin are produced by microbial symbionts rather than the sponge from which the metabolites were originally isolated.

Description: Two single-channel seismic (SCS) data sets collected in 2000 and 2005 were used for a four-dimensional (4D) time-lapse analysis of an active cold vent (Bullseye Vent). The data set acquired in 2000 serves as a reference in the applied processing sequence. The 4D processing sequence utilizes time- and phase-matching, gain adjustments and shaping filters to transform the 2005 data set so that it is most comparable to the conditions under which the 2000 data were acquired. The cold vent is characterized by seismic blanking, which is a result of the presence of gas hydrate in the subsurface either within coarser-grained turbidite sands or in fractures, as well as free gas trapped in these fracture systems. The area of blanking was defined using the seismic attributes instantaneous amplitude and similarity. Several areas were identified where blanking was reduced in 2005 relative to 2000. But most of the centre of Bullseye Vent and the area around it were seen to be characterized by intensified blanking in 2005. Tracing these areas of intensified blanking through the three-dimensional (3D) seismic volume defined several apparent new flow pathways that were not seen in the 2000 data, which are interpreted as newly generated fractures/faults for upward fluid migration. Intensified blanking is interpreted as a result of new formation of gas hydrate in the subsurface along new fracture pathways. Areas with reduced blanking may be zones where formerly plugged fractures that had trapped some free gas may have been opened and free gas was liberated.

Description: A generalization of the transformed Eulerian and temporal residual means is presented. The new formulation uses rotational fluxes of buoyancy, and the full hierarchy of statistical density moments, to reduce the cross-isopycnal eddy flux to the physically relevant component associated with the averaged water mass properties. The resulting eddy-induced diapycnal diffusivity vanishes for adiabatic, statistically steady flow, and is related to either the growth or decay of mesoscale density variance and/or the covariance between small-scale forcing (mixing) and density fluctuations, such as that associated with the irreversible removal of density variance by dissipation. The relationship between the new formulation and previous approaches is described and is illustrated using results from an eddying channel model. The formalism is quite general and applies to all kinds of averaging and to any tracer (not just density).

Description: In this paper it is suggested that a stochastic isotropic diffusive process, representing a spatial first order auto regressive process (AR(1)-process), can be used as a null hypothesis for the spatial structure of climate variability. By comparing the leading empirical orthogonal functions (EOFs) of a fitted null hypothesis with EOF modes of an observed data set, inferences about the nature of the observed modes can be made. The concept and procedure of fitting the null hypothesis to the observed EOFs is in analogy to time analysis, where an AR(1)-process is fitted to the statistics of the time series in order to evaluate the nature of the time scale behavior of the time series. The formulation of a stochastic null hypothesis allows one to define teleconnection patterns as those modes that are most distinguished from the stochastic null hypothesis. The method is applied to several artificial and real data sets including the sea surface temperature of the tropical Pacific and Indian Ocean and the Northern Hemisphere wintertime and tropical sea level pressure.

Description: Using the same approach as in Part I, here it is shown how sampling problems in voluntary observing ship (VOS) data affect conclusions about interannual variations and secular changes of surface heat fluxes. The largest uncertainties in linear trend estimates are found in relatively poorly sampled regions like the high-latitude North Atlantic and North Pacific as well as the Southern Ocean, where trends can locally show opposite signs when computed from the regularly sampled and undersampled data. Spatial patterns of shorter-period interannual variability, quantified through the EOF analysis, also show remarkable differences between the regularly sampled and undersampled flux datasets in the Labrador Sea and northwest Pacific. In particular, it is shown that in the Labrador Sea region, in contrast to regularly sampled NCEP–NCAR reanalysis fluxes, VOS-like sampled NCEP–NCAR reanalysis fluxes neither show significant interannual variability nor significant trends. These regions, although quite localized covering small parts of the globe, play a crucial role for the coupled atmosphere–ocean system. In the Labrador Sea, for instance, interannual and decadal-scale changes of the surface net heat fluxes are known to affect oceanic convection and, thus, the meridional overturning circulation of the Atlantic Ocean. From a discussion of current atmospheric data assimilation systems it is argued that in poorly sampled regions reanalysis products are superior to VOS-based products for studying interannual and interdecadal variations of atmosphere–ocean interaction. In well-sampled regions, on the other hand, conclusions about surface heat flux variations are relatively insensitive to the choice of the flux products used (VOS versus reanalysis data). The results are confirmed for two different datasets, that is, ECMWF 40-yr Re-Analysis (ERA-40) data and seasonal integrations with a recent version of the ECMWF model in which no actual data were assimilated.

Description: Cephalopod beaks retrieved from stomachs of dead emperor penguin chicks at Pointe Géologie, Terre Adélie, provide information on taxonomic and size composition of the penguin’s squid diet, on the trophic range of the squid species preyed upon and on the fractional trophic impact of the penguin on the whole food web. Emperor penguins prey upon four squid species (Psychroteuthis glacialis, Kondakovia longimana, Gonatus antarcticus, Alluroteuthis antarcticus) and do not take squid larger than 480 mm mantle length. Larger squid live either below the penguin’s diving range or are beyond its handling capacity. Nitrogen stable isotope ratios indicate that squids cover a range of about two trophic levels (2.5–8‰ δ15N). The impact of the emperor penguin, however, concentrates on the upper part of this range, about 68% of its squid prey being 〉6‰ δ15N. The principal components of the emperor’s diet, fish, krill and squid, differ distinctly in average trophic level. Consequently the trophic position of the emperor penguin changes accordingly with diet composition and may differ by almost one trophic level between different emperor penguin colonies.

Description: On 19 October 2000, Hurricane Michael merged with an approaching baroclinic trough over the western North Atlantic Ocean south of Nova Scotia. As the hurricane moved over cooler sea surface temperatures (SSTs; less than 25°C), it intensified to category-2 intensity on the Saffir–Simpson hurricane scale [maximum sustained wind speeds of 44 m s−1 (85 kt)] while tapping energy from the baroclinic environment. The large “hybrid” storm made landfall on the south coast of Newfoundland with maximum sustained winds of 39 m s−1 (75 kt) causing moderate damage to coastal communities east of landfall. Hurricane Michael presented significant challenges to weather forecasters. The fundamental issue was determining which of two cyclones (a newly formed baroclinic low south of Nova Scotia or the hurricane) would become the dominant circulation center during the early stages of the extratropical transition (ET) process. Second, it was difficult to predict the intensity of the storm at landfall owing to competing factors: 1) decreasing SSTs conducive to weakening and 2) the approaching negatively tilted upper-level trough, favoring intensification. Numerical hindcast simulations using the limited-area Mesoscale Compressible Community model with synthetic vortex insertion (cyclone bogus) prior to the ET of Hurricane Michael led to a more realistic evolution of wind and pressure compared to running the model without vortex insertion. Specifically, the mesoscale model correctly simulates the hurricane as the dominant circulation center early in the transition process, versus the baroclinic low to its north, which was the favored development in the runs not employing vortex insertion. A suite of experiments is conducted to establish the sensitivity of the ET to various initial conditions, lateral driving fields, domain sizes, and model parameters. The resulting storm tracks and intensities fall within the range of the operational guidance, lending support to the possibility of improving numerical forecasts using synthetic vortex insertion prior to ET in such a model.

Description: On- and off-mound sediment cores from Propeller Mound (Hovland Mound province, Porcupine Seabight) were analysed to understand better the evolution of a carbonate mound. The evaluation of benthic foraminiferal assemblages from the off-mound position helps to determine the changes of the environmental controls on Propeller Mound in glacial and interglacial times. Two different assemblages describe the Holocene and Marine Isotope Stage (MIS) 2 and late MIS 3 (∼31 kyr BP). The different assemblages are related to changes in oceanographic conditions, surface productivity and the waxing and waning of the British Irish Ice Sheet (BIIS) during the last glacial stages. The interglacial assemblage is related to a higher supply of organic material and stronger current intensities in water depth of recent coral growth. During the last glaciation the benthic faunas showed high abundances of cassidulinid species, implying cold bottom waters and a reduced availability of organic matter. High sedimentation rates and the domination of Elphidium excavatum point to shelf erosion related to sea-level lowering (∼50 m) and the progradation of the BIIS onto the shelf. A different assemblage described for the on-mound core is dominated by Discanomalina coronata, Gavelinopsis translucens, Planulina ariminensis, Cibicides lobatulus and to a lower degree by Hyrrokkin sarcophaga. These species are only found or show significantly higher relative abundances in on-mound samples and their maximum contribution in the lower part of the record indicates a higher coral growth density on Propeller Mound in an earlier period. They are less abundant during the Holocene, however. This dataset portrays the boundary conditions of the habitable range for the cold-water coral Lophelia pertusa, which dominates the deep-water reefal ecosystem on the upper flanks of Propeller Mound. The growth of this ecosystem occurs during interglacial and interstadial periods, whereas a retreat of corals is documented in the absence of glacial sediments on-mound. Glacial conditions with cold intermediate waters, a weak current regime and high sedimentation rates provide an unfavourable environmental setting for Lophelia corals to grow. A Late Pleistocene decrease is observed in the mound growth for Propeller Mound, which might face its complete burial in the future, as it already happened to the buried mounds of the Magellan Mound province further north.

Description: Quorum sensing (QS) signals have been considered to play important roles in biofilm development and in the attractiveness of biofilms to higher organisms in marine ecosystem. In this study, bacterial QS signalsacylated homoserine lactone derivatives (AHLs) were detected in 2-, 4-, and 6-day-old subtidal biofilms by using AHLs reporter strains. N-dodecanoyl-homoserine lactone (C12-HSL) was identified in 6-day-old biofilm at a concentration of 9.04 μg cm−minus;2 (3.36 mmol l−minus;1). To investigate the possible role of AHLs in the consequent eventlarval settlement of the polychaete Hydroides elegans onto subtidal biofilmsseven biofilm-derived bacteria that effectively induced larval settlement of H. elegans, were screened for AHL production. One of them, the Vibrio sp. UST950701-007, produced N-hexanoyl-homoserine lactone (C6-HSL). Larval settlement bioassay showed that C6-HSL, C12-HSL, and 3-oxo-octanoyl-homoserine lactone (3-oxo-C8-HLS) at certain concentrations induced some initial larval settlement behaviors such as reducing swimming speed, crawling on the bottom. However, these AHLs did not effectively induce larval settlement in comparison to the effective settlement inducer 3-isobutyl-1-methylxanthine. The possible chemokinetic mechanism and indirect effects of AHLs on larval settlement are suggested.

Description: Because of its chemical and radiative properties, atmospheric ozone constitutes a key element of the Earth's climate system. Absorption of sunlight by ozone in the ultraviolet wavelength range is responsible for stratospheric heating, and determines the temperature structure of the middle atmosphere. Changes in middle atmospheric ozone concentrations result in an altered radiative input to the troposphere and to the Earth's surface, with implications on the energy balance and the chemical composition of the lower atmosphere. Although a wide range of ground- and satellite-based measurements of its integrated content and of its vertical distribution have been performed since several decades, a number of uncertainties still remain as to the response of middle atmospheric ozone to changes in solar irradiance over decadal time scales. This paper presents an overview of achieved findings, including a discussion of commonly applied data analysis methods and of their implication for the obtained results. We suggest that because it does not imply least-squares fitting of prescribed periodic or proxy data functions into the considered times series, time-domain analysis provides a more reliable method than multiple regression analysis for extracting decadal-scale signals from observational ozone datasets. Applied to decadal ground-based observations, time-domain analysis indicates an average middle atmospheric ozone increase of the order of 2% from solar minimum to solar maximum, which is in reasonable agreement with model results.

Description: This study aimed at simulating different degrees of winter warming and at assessing its potential effects on ciliate succession and grazing-related patterns. By using indoor mesocosms filled with unfiltered water from Kiel Bight, natural light and four different temperature regimes, phytoplankton spring blooms were induced and the thermal responses of ciliates were quantified. Two distinct ciliate assemblages, a pre-spring and a spring bloom assemblage, could be detected, while their formation was strongly temperature-dependent. Both assemblages were dominated by Strobilidiids; the pre-spring bloom phase was dominated by the small Strobilidiids Lohmaniella oviformis, and the spring bloom was mainly dominated by large Strobilidiids of the genus Strobilidium. The numerical response of ciliates to increasing food concentrations showed a strong acceleration by temperature. Grazing rates of ciliates and copepods were low during the pre-spring bloom period and high during the bloom ranging from 0.06 (Δ0°C) to 0.23 day−1 (Δ4°C) for ciliates and 0.09 (Δ0°C) to 1.62 day−1 (Δ4°C) for copepods. During the spring bloom ciliates and copepods showed a strong dietary overlap characterized by a wide food spectrum consisting mainly of Chrysochromulina sp., diatom chains and large, single-celled diatoms.

Description: We assessed the temporal changes in and the relationships between the structures of the macroinvertebrate communities and the environmental conditions of the French Rhône River (the river from Lake Geneva to the Mediterranean Sea) over the last 20 years (1985–2004). Multisite environmental and biological datasets were analysed using multiple CO-inertia analysis (MCOA) and Procrustean analysis. Changes in environmental conditions were mainly marked by an improvement in water quality between 1985 and 1991 and by an increase in water temperature from 1985 onwards due to climate change. Improvement in water quality seemed to delay changes in community structures under global warming. We then observed trends in community structures coupled with high temperatures and a decrease in oxygen content. Interestingly, we observed both gradual changes and rapid switches in community states. These shifts seemed coupled to extreme hydroclimatic events (i.e. pulse disturbances). Floods and the 2003 heatwave enhanced the development of eurytolerant and invasive taxa which were probably able to take advantage of gradual warming environmental conditions. Despite various site-specific “press” constraints (e.g. hydropower schemes, nuclear power plants), similar changes in community structures were observed along the French Rhône River. Such consistency in temporal processes at large geographical scales underlined the strength of hydroclimatic constraints on community dynamics compared to specific local disturbances. Finally, community structures did not show any sign of recovery, and their relative sensitivities to extreme hydroclimatic events seemed to increase with time. Thus, our results suggest that global changes may reduce the resilience of current community states.

Description: The use of statolith chemistry to trace migration pathways and distinguish populations of cephalopods is based on the assumption that the elemental composition of statoliths is influenced by physicochemical properties of the ambient environment. However, such influences have not been investigated experimentally up until now. This study presents the first microchemical analyses of cephalopod statoliths obtained from laboratory experiments under different controlled temperature and salinity conditions. Our results show that statolith chemical composition is strongly related to both salinity and temperature in ambient waters. The Ba/Ca ratio is negatively related to temperature and shows no relation to salinity. The I/Ca ratio is positively related to temperature and negatively to salinity. No Sr/Ca relation was found to either salinity or temperature, suggesting that the well-established proxy strontium is not as useful in cephalopod statoliths as in other biomineralized aragonites. Microanalysis of trace elements, however, shows an enormous potential for field studies on distribution, migration and stock separation of cephalopods. Furthermore, Synchrotron X-ray Fluorescence Analysis is introduced as a promising novel method for statolith analysis, providing a spatial resolution of typically 10–15 μm combined with detection limits down to 0.5 ppm.

Description: In this paper, a version of the European Centre for Medium-Range Weather Forecasts (ECMWF) operational model is used to (i) diagnose the diabatic heating associated with the winter North Atlantic Oscillation (NAO) and (ii) assess the role of this heating in the dynamics of the NAO in the model. Over the North Atlantic sector, the NAO-related diabatic heating is dominated above the planetary boundary layer by the latent heat release associated with precipitation, and within the boundary layer by vertical diffusion associated with sensible heat flux from the ocean. An association between La Niña–El Niño–type conditions in the tropical Pacific and the positive/negative NAO is found in model runs using initial conditions and sea surface temperature (SST) lower boundary conditions from the period 1982–2001, but not in a companion set of model runs for the period 1962–81. Model experiments are then described in which the NAO-related diabatic heating diagnosed from the 1982–2001 control run is applied as a constant forcing in the model temperature equation using both 1982–2001 and 1962–81 model setups. To assess the local feedback from the diabatic heating, the specified forcing is first restricted to the North Atlantic sector alone. In this case, the model response (in an ensemble mean sense) is suggestive of a weak negative feedback, but exhibits more baroclinic structure and has its centers of action shifted compared to those of the NAO. On the other hand, forcing with only the tropical Pacific part of the diabatic heating leads to a robust model response in both the 1982–2001 and 1962–81 model setups. The model response projects on to the NAO with the same sign as that used to diagnose the forcing, arguing that the link between the tropical Pacific and the NAO is real in the 1982–2001 control run. The missing link in the corresponding run for 1962–81 is a result of a change in the tropical forcing between the two periods, and not the extratropical flow regime.

Description: The spatial structure of surface air temperature (SAT) anomalies in the extratropical latitudes of the Northern Hemisphere (NH) during the 20th century is studied from the data obtained over the period 1892–1999. The expansion of the mean (over the winter and summer periods) SAT anomalies into empirical orthogonal functions (EOFs) is used for analysis. It is shown that variations in the mean air temperature in the Arctic region (within the latitudes 60°–90°N) during both the winter and summer periods can be described with a high accuracy by two spatial orthogonal modes of variability. For the winter period, these are the EOF related to the leading mode of variability of large-scale atmospheric circulation in the NH, the North Atlantic Oscillation, and the spatially localized (in the Arctic) EOF, which describes the Arctic warming of the mid-20th century. The expansion coefficient of this EOF does not correlate with the indices of atmospheric circulation and is hypothetically related to variations in the area of the Arctic ice cover that are due to long-period variations in the influx of oceanic heat from the Atlantic. On the whole, a significantly weaker relation to the atmospheric circulation is characteristic of the summer period. The first leading variability mode describes a positive temperature trend of the past decades, which is hypothetically related to global warming, while the second leading EOF describes a long-period oscillation. On the whole, the results of analysis suggest a significant effect of natural climatic variability on air-temperature anomalies in the NH high latitudes and possible difficulties in isolating an anthropogenic component of climate changes.

Description: Ecological forecasts predict the immigration of boreal species into Arctic waters as one consequence of rising sea temperatures. Here, we report the finding of Atlantic snake pipefish (Entelurus aequoreus) off the western coast of Spitsbergen at 79°N in August 2006. This syngnathid fish species, which was presumed to be confined to waters south of Iceland, has dramatically increased in population size in its core distribution area in the northeastern Atlantic since 2002, probably in response to greater reproduction success due to higher water temperatures. We conclude that our finding is an indication of the predicted northward extension of the distribution range of boreal species.

Description: The distribution of platinum group elements (PGEs) in massive sulfides and hematite–magnetite±pyrite assemblages from the recently discovered basalt-hosted Turtle Pits hydrothermal field and in massive sulfides from the ultramafic-hosted Logatchev vent field both on the Mid-Atlantic Ridge was studied and compared to that from selected ancient volcanic-hosted massive sulfide (VHMS) deposits. Cu-rich samples from black smoker chimneys of both vent fields are enriched in Pd and Rh (Pd up to 227 ppb and Rh up to 149 ppb) when compared to hematite–magnetite-rich samples from Turtle Pits (Pd up to 10 ppb, Rh up to 1.9 ppb). A significant positive correlation was established between Cu and Rh in sulfide samples from Turtle Pits. PGE chondrite-normalized patterns (with a positive Rh anomaly and Pd and Au enrichment), Pd/Pt and Pd/Au ratios close to global MORB, and high values of Pd/Ir and Pt/Ir ratios indicate mafic source rock and seawater involvement in the hydrothermal system at Turtle Pits. Similarly shaped PGE chondrite-normalized patterns and high values of Pd/Pt and Pd/Ir ratios in Cu-rich sulfides at Logatchev likely reflect a similar mechanism of PGE enrichment but with involvement of ultramafic source rocks.

Description: Seasonal lipid dynamics of various developmental stages were investigated in Pseudocalanus minutus and Oithona similis. For P. minutus, the dominance of 16:1(n−7), 16:4(n−3) and 20:5(n−3) fatty acids indicated a diatom-based nutrition in spring, whereas 22:6(n−3), 16:0, 18:2(n−6) and 18:1(n−9) pointed to a flagellate-based diet during the rest of the year as well as omnivorous/carnivorous low-level feeding during winter. The shorter-chain fatty alcohols 14:0 and 16:0 prevailed, also reflecting biosynthetic processes typical of omnivores or carnivores. Altogether, the lipid signatures characterized P. minutus as an opportunistic feeder. In contrast, O. similis had consistently high amounts of the 18:1(n−9) fatty acid in all stages and during all seasons pointing to a generally omnivorous/carnivorous/detritivorous diet. Furthermore, the fatty alcohol 20:1(n−9) reached high percentages especially in adult females and males, and feeding on Calanus faecal pellets is suggested. Fatty alcohols, as wax ester moieties, revealed significant seasonal variations in O. similis and a seasonal trend towards wax ester accumulation in autumn in P. minutus. P. minutus utilized its lipid deposits for development in the copepodite stages III and IV and for gonad maturation in CV and females during the dark season. However, CVs and females depended on the spring phytoplankton bloom for final maturation processes and reproduction. O. similis fueled gonad maturation and egg production for reproduction in June by wax esters, whereas reproduction in August/September co-occurred with the accumulation of new depot lipids. Both species revealed significantly higher wax ester levels in deeper (〉50 m) as compared to surface (0–50 m) dwelling individuals related to a descent prior to overwintering.

Description: The depth of winter convection in the central Labrador Sea is strongly influenced by the prevailing stratification in late summer. For this late summer stratification salinity is as important as temperature, and in the upper water layers salinity even dominates. To analyze the source of the spring and summer freshening in the central region, seasonal freshwater cycles have been constructed for the interior Labrador Sea, the West Greenland Current, and the Labrador Current. It is shown that none of the local freshwater sources is responsible for the spring–summer freshening in the interior, which appears to occur in two separate events in April to May and July to September. Comparing the timing and volume estimates of the seasonal freshwater cycles of the boundary currents with the central Labrador Sea helps in understanding the origin of the interior freshwater signals. The first smaller pulse cannot be attributed clearly to either of the boundary currents. The second one is about three times stronger and supplies 60% of the seasonal summer freshwater. Transport estimates and calculated mixing properties provide evidence that its source is the West Greenland Current. The finding implies a connection also on interannual time scales between Labrador Sea surface salinity and freshwater sources in the West Greenland Current and farther upstream in the East Greenland Current. The freshwater input from the West Greenland Current thus also is the likely pathway for the known modulation of Labrador Sea Water mass formation by freshwater export from the Arctic (via the East Greenland Current), which implies some predictability on longer time scales.

Description: Multichannel singular spectrum analysis (MSSA) of surface zonal wind, sea surface temperature (SST), 20° isotherm depth, and surface zonal current observations (between 1990 and 2004) identifies three coupled ocean–atmosphere modes of variability in the tropical Pacific: the El Niño–Southern Oscillation (ENSO), the annual cycle, and a mode with a 14–18-month period, which is referred to as sub-ENSO in this study. The sub-ENSO mode accounts for the near 18-month (near annual) variability prior to (following) the 1997/98 El Niño event. It was strongest during this El Niño event, with SST anomalies exceeding 1°C. Sub-ENSO peak SST anomalies are ENSO-like in structure and are associated with eastward propagating heat content variations. However, the SST anomalies are preceded by and in near quadrature with relatively strong remotely forced westward propagating zonal current variations, suggesting the sub-ENSO mode arises from the zonal-advective feedback. The sub-ENSO mode is found to exist also in an intermediate complexity model (ICM) of the tropical Pacific. A heat budget analysis of the model’s sub-ENSO mode shows it indeed arises from the zonal-advective feedback. In the model, both ENSO and sub-ENSO modes coexist, but there is a weak nonlinear interaction between them. Experiments also show that the observed changes in sub-ENSO’s characteristics may be explained by changes in the relative importance of zonal and vertical advection SST tendencies.

Description: After the discovery of large densities of Mnemiopsis leidyi in the Baltic Sea near Kiel by Javidpour et al. (First record of Mnemiopsis leidyi A. Agassiz 1865 in the Baltic Sea, 2006) in October 2006, we investigated the gelatinous zooplankton in the North Sea near Helgoland and recorded Mnemiopsis leidyi for the first time in the North Sea, albeit in much lower densities than those recorded in the Baltic Sea.

Description: A novel selective enrichment method is described for phototrophic green sulfur bacteria even in the presence of purple sulfur and purple nonsulfur bacteria using sulfanilate, which was discovered during efforts to selectively isolate sulfanilate-metabolizing anoxygenic phototrophic bacteria from marine habitats. Samples for these experiments were obtained from beaches, saltpans, subsurface mangrove soils, fish and prawn aquaculture ponds and backwaters of the East and West coasts of India. Photoorganoheterotrophic and photolithoautotrophic enrichments in the absence of sulfanilate predominantly yielded purple bacterial enrichments. In contrast, photolithoautotrophic enrichments in the presence of sulfanilate yielded green-colored enrichments from the same samples. Whole cell absorption spectra of the enrichment cultures revealed the presence of bacteriochlorophyll c and thus green phototrophic bacteria. Microscopic observation demonstrated the presence of sulfur globules outside the bacterial cells and the presence of non-motile cells, some of which had prosthecae. 16S rDNA sequences obtained from green sulfur bacterial strains isolated from enrichment cultures confirmed the presence of representatives of the green sulfur bacterial genera Prosthecochloris and Chlorobaculum. The selective pressure of sulfanilate exerted through inhibition of phototrophic purple sulfur bacteria was demonstrated by inhibition studies using the purple sulfur bacteria Marichromatium indicum JA100 and Marichromatium sp. JA120 (JCM 13533) and the green sulfur bacterium Prosthecochloris sp. JAGS6 (JCM 13299).

Description: A coordinated set of global coupled climate model [atmosphere–ocean general circulation model (AOGCM)] experiments for twentieth- and twenty-first-century climate, as well as several climate change commitment and other experiments, was run by 16 modeling groups from 11 countries with 23 models for assessment in the Intergovernmental Panel on Climate Change (IPCC) Fourth Assessment Report (AR4). Since the assessment was completed, output from another model has been added to the dataset, so the participation is now 17 groups from 12 countries with 24 models. This effort, as well as the subsequent analysis phase, was organized by the World Climate Research Programme (WCRP) Climate Variability and Predictability (CLIVAR) Working Group on Coupled Models (WGCM) Climate Simulation Panel, and constitutes the third phase of the Coupled Model Intercomparison Project (CMIP3). The dataset is called the WCRP CMIP3 multimodel dataset, and represents the largest and most comprehensive international global coupled climate model experiment and multimodel analysis effort ever attempted. As of March 2007, the Program for Climate Model Diagnostics and Intercomparison (PCMDI) has collected, archived, and served roughly 32 TB of model data. With oversight from the panel, the multimodel data were made openly available from PCMDI for analysis and academic applications. Over 171 TB of data had been downloaded among the more than 1000 registered users to date. Over 200 journal articles, based in part on the dataset, have been published so far. Though initially aimed at the IPCC AR4, this unique and valuable resource will continue to be maintained for at least the next several years. Never before has such an extensive set of climate model simulations been made available to the international climate science community for study. The ready access to the multimodel dataset opens up these types of model analyses to researchers, including students, who previously could not obtain state-of-the-art climate model output, and thus represents a new era in climate change research. As a direct consequence, these ongoing studies are increasing the body of knowledge regarding our understanding of how the climate system currently works, and how it may change in the future.

Description: In the marine environment, biofilms on submerged surfaces can promote or discourage the settlement of invertebrate larvae and macroalgal spores. The settlement-mediating effects of biofilms are believed to involve a variety of biofilm attributes including surface chemistry, micro-topography, and a wide range of microbial products from small-molecule metabolites to high-molecular weight extracellular polymers. The settled organisms in turn can modify microbial species composition of biofilms and thus change the biofilm properties and dynamics. A better understanding of biofilm dynamics and chemical signals released and/or stored by biofilms will facilitate the development of antifouling and mariculture technologies. This review provides a brief account of 1) existing knowledge of marine biofilms that are relevant to settlement mediation, 2) biotechnological application of biofilms with respect to developing non-toxic antifouling technologies and improving the operation of aquaculture facilities, and 3) challenges and future directions for advancing our understanding of settlement-mediating functions of biofilms and for applying this knowledge to real-life situations.

Description: Sampling uncertainties in the voluntary observing ship (VOS)-based global ocean–atmosphere flux fields were estimated using the NCEP–NCAR reanalysis and ECMWF 40-yr Re-Analysis (ERA-40) as well as seasonal forecasts without data assimilation. Air–sea fluxes were computed from 6-hourly reanalyzed individual variables using state-of-the-art bulk formulas. Individual variables and computed fluxes were subsampled to simulate VOS-like sampling density. Random simulation of the number of VOS observations and simulation of the number of observations with contemporaneous sampling allowed for estimation of random and total sampling uncertainties respectively. Although reanalyses are dependent on VOS, constituting an important part of data assimilation input, it is assumed that the reanalysis fields adequately reproduce synoptic variability at the sea surface. Sampling errors were quantified by comparison of the regularly sampled (i.e., 6 hourly) and subsampled monthly fields of surface variables and fluxes. In poorly sampled regions random sampling errors amount to 2.5°–3°C for air temperature, 3 m s−1 for the wind speed, 2–2.5 g kg−1 for specific humidity, and 15%–20% of the total cloud cover. The highest random sampling errors in surface fluxes were found for the sensible and latent heat flux and range from 30 to 80 W m−2. Total sampling errors in poorly sampled areas may be higher than random ones by 60%. In poorly sampled subpolar latitudes of the Northern Hemisphere and throughout much of the Southern Ocean the total sampling uncertainty in the net heat flux can amount to 80–100 W m−2. The highest values of the uncertainties associated with the interpolation/extrapolation into unsampled grid boxes are found in subpolar latitudes of both hemispheres for the turbulent fluxes, where they can be comparable with the sampling errors. Simple dependencies of the sampling errors on the number of samples and the magnitude of synoptic variability were derived. Sampling errors estimated from different reanalyses and from seasonal forecasts yield qualitatively comparable spatial patterns, in which the actual values of uncertainties are controlled by the magnitudes of synoptic variability. Finally, estimates of sampling uncertainties are compared with the other errors in air–sea fluxes and the reliability of the estimates obtained is discussed.

Description: This is the first in-depth study of a cluster of cold-water coral reefs, the Fugløy Reefs, found at 70°N on the Norwegian margin. Combining high resolution seismic reflection data, side-scan sonar, video-images, and oceanographic measurements reveals the geologic, geomorphologic and oceanographic setting in which the reefs occur. The reefs consist mainly of the scleractinian ahermatypic Lophelia pertusa, and exist below the thermocline at water depths between 140 m and 190 m. The reefs appear as cone-shaped, acoustically transparent features on seismic reflection data, consistently located in places characterized by the availability of hard substrate, high relief, and periodical exposure to high tidal cur-rents (〉30 cm/s). These currents transport water of the Norwegian Atlantic Current to the reefs from an area with fluid expulsion-related pockmarks. The spatial relationship between reef and pockmark locations and current directions suggests that seepage of biogenic gas might be a catalyst to reef growth. With a height of more than 40 m some of the Fugløy reefs are among the highest reported from the Norwegian Margin. This indicates highly fa-vourable growth conditions, and conservative estimates indicate a net growth rate for the reefs of ~5 mm/yr. We expect that cold-water reefs will be found further north along the Barents Sea margin as general awareness on the geophysical signature and appearance of the reefs increases, because all known factors involved in reef establishment and growth are within the required intervals also further north. Introduction

Description: The symmetry or asymmetry of the process of continental breakup has been much debated over the last 20 years, with various authors proposing asymmetric simple shear models, others advocating more symmetric, pure shear models and some combinations of the two. The unroofing of vast expanses of sub-continental mantle at non-volcanic margins has led some authors to argue in favour of simple shear models, but supporting evidence is lacking. Subsidence evidence from conjugate margin pairs is equivocal, and the detailed crustal and lithospheric structure of such pairs not generally well enough known to draw firm conclusions. In the Porcupine Basin, where the final stages of break-up are preserved, the development of structural asymmetry is demonstrable, and apparently related to late stage coupling of the crust to the mantle following the complete embrittlement of the crust. This agrees with theoretical modelling results, which predict that asymmetric models can develop only on a lithospheric scale when the crust and mantle are tightly coupled. However, whether such asymmetry is maintained during continued exhumation of the mantle is unclear.

Description: Specific associations of bacteria with phytoplankton have recently been reported in the literature. In our study, we analyzed bacterial communities of microalgal cultures related to algal growth phases. Seven freshly isolated key diatom and dinoflagellate species from Helgoland Roads, North Sea, were investigated. The community composition of associated bacteria as well as the cell numbers, the photosynthetic efficiency of the algae, and the depletion of inorganic nutrients in the medium were recorded over a period of 8 weeks in batch cultures. Diversity and succession of bacterial communities was analyzed by ribosomal intergenic spacer analysis. Phylogenetic analysis of bacterial populations was performed by denaturing gradient gel electrophoresis of 16S rRNA genes followed by DNA sequence analysis. Members of Alphaproteobacteria and Gammaproteobacteria and the Flavobacteria–Sphingobacteria group within the Bacteroidetes phylum predominated in the cultures. Differences in free-living and attached bacterial populations were observed between the phylogenetic groups. Shifts in the bacterial communities could not be correlated to changes of nutrient levels or algal growth phases. Regarding our results, it should not be generalized that the compositions of the bacterial communities are strictly species specific for microalgae. The importance of factors like the composition of exudates is apparent.

Description: Output from an eddy-resolving model of the North Atlantic Ocean is used to estimate values for the thickness diffusivity κ appropriate to the Gent and McWilliams parameterization. The effect of different choices of rotational eddy fluxes on the estimated κ is discussed. Using the raw fluxes (no rotational flux removed), large negative values (exceeding −5000 m2 s−1) of κ are diagnosed locally, particularly in the Gulf Stream region and in the equatorial Atlantic. Removing a rotational flux based either on the suggestion of Marshall and Shutts or the more general theory of Medvedev and Greatbatch leads to a reduction of the negative values, but they are still present. The regions where κ 〈 0 correspond to regions where eddies are acting to increase, rather than decrease (as in baroclinic instability) the mean available potential energy. In the subtropical gyre, κ ranges between 500 and 2000 m2 s−1, rapidly decreasing to zero below the thermocline in all cases. Rotational fluxes and κ are also estimated using an optimization technique. In this case, |κ| can be reduced or increased by construction, but the regions where κ 〈 0 are still present and the optimized rotational fluxes also remain similar to a priori values given by the theoretical considerations. A previously neglected component (ν) of the bolus velocity is associated with the horizontal flux of buoyancy along, rather than across, the mean buoyancy contours. The ν component of the bolus velocity is interpreted as a streamfunction for eddy-induced advection, rather than diffusion, of mean isopycnal layer thickness, showing up when the lateral eddy fluxes cannot be described by isotropic diffusion only. All estimates show a similar large-scale pattern for ν, implying westward advection of isopycnal thickness over much of the subtropical gyre. Comparing ν with a mean streamfunction shows that it is about 10% of the mean in midlatitudes and even larger than the mean in the Tropics.

Description: Coastal areas are exposed to a variety of threats due to high population densities and rapid economic development. How will this affect human welfare and our dependence on nature's capacity to provide ecosystem goods and services? This paper is original in evaluating this concern for major habitats (macroalgae, seagrasses, blue mussel beds, and unvegetated soft bottoms) in a temperate coastal setting. More than 40 categories of goods and services are classified into provisional, regulating, and cultural services. A wide variety of Swedish examples is described for each category, including accounts of economic values and the relative importance of different habitats. For example, distinguishing characteristics would be the exceptional importance of blue mussels for mitigation of eutrophication, sandy soft bottoms for recreational uses, and seagrasses and macroalgae for fisheries production and control of wave and current energy. Net changes in the provision of goods and services are evaluated for three cases of observed coastal ecosystem shifts: i) seagrass beds into unvegetated substrate; ii) unvegetated shallow soft bottoms into filamentous algal mat dominance; and iii) macroalgae into mussel beds on hard substrate. The results are discussed in a management context including accounts of biodiversity, interconnectedness of ecosystems, and potential of economic valuation.

Description: Proteins containing the PB1 domain, a protein interaction module conserved in animals, fungi, amoebas, and plants, participate in diverse biological processes. The PB1 domains adopt a ubiquitin-like β-grasp fold, containing two α helices and a mixed five-stranded β sheet, and are classified into groups harboring an acidic OPCA motif (type I), the invariant lysine residue on the first β strand (type II), or both (type I/II). The OPCA motif of a type I PB1 domain forms salt bridges with basic residues, especially the conserved lysine, of a type II PB1 domain, thereby mediating a specific PB1-PB1 heterodimerization, whereas additional contacts contribute to high affinity and specificity of the modular interaction. The canonical PB1 dimerization is required for the formation of complexes between p40phox and p67phox (for activation of the NADPH oxidase crucial for mammalian host defense), between the scaffold Bem1 and the guanine nucleotide exchange factor Cdc24 (for polarity establishment in yeasts), and between the polarity protein Par6 and atypical protein kinase C (for cell polarization in animal cells), as well as for the interaction between the mitogen-activated protein kinase kinase kinases MEKK2 or MEKK3 and the downstream target mitogen-activated protein kinase kinase MEK5 (for early cardiovascular development in mammals). PB1 domains can also mediate interactions with other protein domains. For example, an intramolecular interaction between the PB1 and PX domains of p40phox regulates phagosomal targeting of the microbicidal NADPH oxidase; the PB1 domain of MEK5 is likely responsible for binding to the downstream kinase ERK5, which lacks a PB1 domain; and the scaffold protein Nbr1 associates through a PB1-containing region with titin, a sarcomere protein without a PB1 domain. This Review describes various aspects of PB1 domains at the molecular and cellular levels.

Description: Scleractinian corals are increasingly used as recorders of modern and paleoclimates. The microstructure of four common reef-building coral genera is documented here: Acropora, Pocillopora, Goniastrea, and Porites. This study highlights the complexity and spatial variability of skeletal growth in different coral genera and suggests that a single growth model is too generalized to allow the accurate depiction of the variability observed in the four genera studied. New models must be introduced in order for coral skeletogenesis to be understood adequately to allow coral skeletons to serve as repositories of temporally constrained geochemical data. Owing to differences in microstructural patterns in different genera, direct observation of microstructural elements and growth lines may be necessary to allow microsamples to be placed into series that represent temporal sequences with known degrees of time averaging. Such data are critical for constraining microsampling strategies aimed at developing true time series geochemical data at very fine spatial and temporal scales.

Description: We describe the feeding habits of 70 blue sharks (Prionace glauca) and 39 salmon sharks (Lamna ditropis) caught at 0–7 m depth at night by research drift gillnets in the transition region of the western North Pacific during April–May of 1999 and 2000. Blue sharks of 50–175 cm total length fed on a large variety of prey species, consisting of 24 species of cephalopods and 16 species of fishes. Salmon sharks of 69–157 cm total length fed on a few prey species, consisting of 10 species of cephalopods and one species of fish. Important prey for the blue sharks were large, non-active, gelatinous, meso- to bathypelagic cephalopods (e.g., Chiroteuthis calyx, Haliphron atlanticus, Histioteuthis dofleini and Belonella borealis) and small myctophid fishes. Important prey for the salmon sharks were mid-sized, active, muscular, epi- to mesopelagic squids (e.g. Gonatopsis borealis, Onychoteuthis borealijaponica and Berryteuthis anonychus). Our results suggest that blue sharks feed on cephalopods mainly during the daytime when they descend to deep water. Salmon sharks may feed opportunistically with no apparent diurnal feeding period. Blue sharks and salmon sharks have sympatric distribution in the transition region in spring; they have different feeding habits and strategies that reduce competition for food resources.

Description: During hydroacoustic observations in November 2002, a large concentration of chokka squid (Loligo reynaudi) was monitored for three days during fairly constant wind speed and direction, that marginally improved during the period of observations. During this period, the concentration (estimated biomass 48 t) disintegrated into small, separate aggregations. Most often, such dispersal is weather-related, but obviously not in this case. Instead, a bottom trawl made adjacent to the concentration, as well as underwater camera observations revealed an unusually large number of predators, mostly bronze whaler sharks (Carcharhinus brachyurus). Most whaler sharks caught in the trawl had chokka in their stomachs. Therefore, one explanation for the break-up of this squid concentration was the unusual predator activity. Video observations revealed, that these attacks occurred on the bottom where squid spawn; while none were observed in the water column where squid pair, mate and swim in a circular motion preparing for descent to the egg bed. The disintegration of the whole concentration suggested that disrupted spawning affects the upper part of the typical mushroom-shaped structure as well, and squid subsequently disperse and/or move away as a result of predation by whaler sharks.

Description: A two day workshop on Southern Ocean cephalopods was held in Hobart, Tasmania, Australia prior to the triennial 2006 Cephalopod International Advisory Council (CIAC) symposium. The workshop provided a second international forum to present the current state of research and new directions since the last Southern Ocean cephalopod meeting held in 1993. A major focus of the workshop was trophic ecology and the use of a variety of tools that can be applied in Southern Ocean trophic studies for both cephalopod and predator researchers. New tools that are being used as trophic indicators and tracers in food chain pathways include stable isotope, heavy metal and fatty acid signature analysis. Progress is also being made on understanding squid population dynamics in relation to other key components of the ecosystem by incorporating squid data in ecosystem models. Genetic barcoding is now of great value to fish taxonomy as well as other groups and it is expected that a cephalopod barcoding initiative will be an important tool for cephalopod taxonomy. There is a current initiative to produce a new cephalopod beak identification guide to assist predator biologists in identifying cephalopod prey items. There were also general discussions on specific taxonomic issues, Southern Ocean Cephalopod paralarvae and parasites, and suggestions for future CIAC workshop topics.

Description: The pharaoh cuttle Sepia pharaonis Ehrenberg, 1831 (Mollusca: Cephalopoda: Sepiida) is a broadly distributed species of substantial fisheries importance found from east Africa to southern Japan. Little is known about S. pharaonis phylogeography, but evidence from morphology and reproductive biology suggests that Sepia pharaonis is actually a complex of at least three species. To evaluate this possibility, we collected tissue samples from Sepia pharaonis from throughout its range. Phylogenetic analyses of partial mitochondrial 16S sequences from these samples reveal five distinct clades: a Gulf of Aden/Red Sea clade, a northern Australia clade, a Persian Gulf/Arabian Sea clade, a western Pacific clade (Gulf of Thailand and Taiwan) and an India/Andaman Sea clade. Phylogenetic analyses including several Sepia species show that S. pharaonis sensu lato may not be monophyletic. We suggest that “S. pharaonis” may consist of up to five species, but additional data will be required to fully clarify relationships within the S. pharaonis complex.

Description: Coleoid cephalopods show flexibility in their reproductive strategies or mode of spawning, which can range from simultaneous terminal spawning over a short period at the end of the animal’s life to continuous spawning over a long period of the animal’s life. Although a simultaneous terminal spawning strategy is typical of shallow water temperate octopuses, it is not known whether deep-sea octopods would have the same reproductive strategy. The reproductive strategies and fecundity were investigated in nine species of deep-sea incirrate octopuses: Bathypolypus arcticus, Bathypolypus bairdii, Bathypolypus ergasticus, Bathypolypus sponsalis, Bathypolypus valdiviae, Benthoctopus levis, Benthoctopus normani, Benthoctopus sp., and Graneledone verrucosa (total n = 85). Egg-length frequency graphs and multivariate analysis (principal components analysis) suggest that B. sponsalis has a synchronous ovulation pattern and therefore a simultaneous terminal spawning strategy. Although a simultaneous terminal spawning strategy is most likely for B. levis and B. normani, the egg-length frequency graphs and multivariate analysis also suggest a greater variation in egg-lengths which could lead to spawning over an extended period.

Description: The concept of a Barcode of Life Database (BoLD) for the Class Cephalopoda (Phylum Mollusca) was introduced at the Cephalopod International Advisory Council (CIAC) symposium in Hobart, Australia, February 2006. This suggestion was met with significant interest, concern and debate. This review attempts to describe the concept of the BoLD initiative and to outline considerations and concerns specific to a cephalopod BoLD.

Description: We describe here two new species of oegopsid squids. The first is an Asperoteuthis (Chiroteuthidae), and it is based on 18 specimens. This new species has sucker dentition and a funnel–mantle locking apparatus that are unique within the genus. The second new species is a Promachoteuthis (Promachoteuthidae), and is based on a unique specimen. This new species has tentacle ornamentation which is unique within the genus. We also describe a new genus and a new species of sepioid squid in the subfamily Heteroteuthinae (Sepiolidae) and it is based on four specimens. This new genus and species exhibits unique modifications of the arms in males.

Description: Onychoteuthid squids are among the most common cephalopods found in New Zealand waters, and comprise a major portion of the regional diets of teuthophagous marine mammals. Although several recent publications have addressed aspects of various species’ biology and reproduction, the systematics of the group remains poorly understood. Herein the ontogenetic and adult morphologies of regionally occurring known species of the genera Moroteuthis, Onychoteuthis, and Notonykia are redescribed, and Notonykia nesisi sp. nov. is described for the first time. Ontogenetic and sexually dimorphic variation in characters and character states associated with body proportions, and beak, radula, tentacular hook, palatine tooth and gladius morphologies are also described and compared between local onychoteuthid taxa for the first time.

Description: Deep-sea squids, Moroteuthis ingens and Gonatus antarcticus, were collected in the slope waters off the Falkland Islands and their reproductive systems preserved and investigated onshore. Changes in oocyte length-frequencies at maturation and spawning, and their fecundity were studied. These squids, as well as many other species, are characterised by a synchronous oocyte growth and ovulation. Oviducts are not used for ripe egg accumulation and consequently the universal scale of Lipinski (1979) cannot be applied to assign female maturity. M. ingens spawns near the bottom; its fecundity is 168–297 thousand eggs. Maximum egg size is 1.8–2.7 mm. G. antarcticus spawns midwater; its fecundity is 10–25 thousand eggs. Egg size is 3.2–3.3 mm. In M. ingens spawning takes place in the austral autumn and winter, in G. antarcticus—in austral winter. Our data and the literature data show that the so-called “synchronous ovulation” probably occurs in all deepwater squids. This pattern is very rare among fish, but is quite common among benthic octopods that brood their egg masses.

Description: Lycoteuthis lorigera is an oceanic squid that is abundant in the Benguela system. Little is known about the biology of this squid except that it is eaten in large numbers by numerous oceanic predators and that males grow to larger size than females, which is unique for oegopsid squid. The aim of this study was to better understand the biology of this species by investigating its age and growth, as well as its mating system. Toward this end, the age of 110 individuals, ranging from 35 to 110 mm, was estimated by counting statolith growth increments. Estimates of age ranged from 131 to 315 days and varied with mantle length. No significant differences were found in the size of males and females of equivalent ages. The relationship between ML and age for both sexes was best described by an exponential growth curve, probably because no early life stages were aged in this study. Only one mature male (ML 160 mm) was aged, and preliminary estimates suggest it was 386 days old. Instantaneous growth rates were low (0.54% ML/day and 1.4% BM/day) but consistent with enoploteuthid growth rates. When the growth rate of L. lorigera was corrected for temperature encountered during the animal’s life, the growth rate was fast (0.47% BM/degree-days) and consistent with the hypothesis that small cephalopods grow fast and that large cephalopods grow older, rather than fast. Mature females were often mated and had spermatangia in a seminal receptacle on the dorsal pouch behind the nuchal cartilage. Males probably transfer spermatangia to the females using their long second and/or third arm pair since the paired terminal organs open far from the mantle opening.

Description: Pholidoteuthis is unusual amongst genera of squid in that the mantle is beset with close-packed dermal cushions (scales). Despite frequent reference to species in this genus, considerable systematic confusion surrounds usage of the generic name, erected prematurely given that the same systematic characters apply for the earlier Tetronychoteuthis Pfeffer, 1900, and species attributed to it. The synonymy and ontogenetic morphology of Pholidoteuthis massyae (Pfeffer 1912) new comb., the senior synonym of P. boschmai Adam, 1950, is reported. The relationship between this species and others referred to Tetronychoteuthis, Lepidoteuthis, the Pholidoteuthidae Adam, 1950, Lepidoteuthidae Pfeffer, 1912 and Octopoteuthidae Berry, 1912, is discussed. A conjectural account of the mechanics of mating in P. massyae is provided based on the nature of spermatophore insertion in the female mantle, and modification to the terminal region of the male’s genital apparatus.

Description: The aim of this study was to determine how size, age, somatic and reproductive condition, abundance and egg production of southern calamary spawning aggregations changed during the spawning season in each of 2 years. During the spawning period in at least one of the years there was a decline as much as 20% in average size, 50% in somatic condition, 28–34% in size-at-age, 26–29% in reproductive status, as well as abundance and reproductive output of the stock declining during the spawning season. However, this change was not a function of the population becoming reproductively exhausted, as the aggregation was composed of different individuals with different biological characteristics. In each month the average age of individuals was ca. 6 mo, indicating that squid that had hatched at different times had entered the spawning aggregations, suggesting that the aggregation was made-up of a succession of microcohorts. Currently, management of many squid populations assumes that there is a single cohort in the aggregation. Therefore, estimating stock biomass at the start of the spawning season cannot be used as the population is constantly changing as micro-cohorts move into the aggregation. An instantaneous estimate of the spawning biomass, independent of fishing activity may be obtained by quantifying the density of deposited eggs. The strategy of individuals with a diversity of life history characteristics coming together in a single spawning aggregation may ensure the phenotypic and genetic diversity required to guarantee successful recruitment of this short-lived species. Therefore, temporally structured protection from harvest throughout the spawning season will ensure maintenance of this population diversity.

Description: In the northwestern Bering Sea in autumn, the epipelagic cephalopod community was represented by the boreal fauna, and was found to be composed of three families and nine species of the order Teuthida: Gonatidae (Berryteuthis magister, Boreoteuthis borealis, Gonatopsis japonicus, Gonatus madokai, Gonatus kamtschaticus, Gonatus onyx, and Gonatus pyros), Chiroteuthidae (Chiroteuthis calyx) and Onychoteuthidae (Onychoteuthis borealijaponica). Two pelagic gonatid species (B. borealis and G. kamtschaticus) dominated the cephalopod community in the upper 50 m. The distribution patterns of B. borealis and G. onyx were associated with diel vertical migrations of these squid. The distribution of two distinct size groups of G. kamtschaticus suggested ontogenetic migration of larger squid to deeper layers, and adds to previous data suggesting that this species may be a heterogeneous assemblage. Demersal B. magister rarely occurred in the surface waters. The occurrence of maturing O. borealijaponica in the southern marine area indicated that these were occasional seasonal migrants from the ocean. The occurrence of juvenile C. calyx suggested that these squid may conduct vertical forage migrations from deep waters to the surface layers.

Description: Statolith size and growth was used to determine the influence of abiotic factors on the growth of Loligo vulgaris and Sepioteuthis australis embryos. Recently spawned egg masses collected from the field were incubated in the laboratory under different levels of light intensity, photoperiod, or short periods of low salinity (30‰). Double tetracycline staining was used to follow statolith growth. In L. vulgaris constant light conditions produced significantly slower growth in the embryonic statoliths and embryos held at summer photoperiod had slower statolith growth than those held at winter photoperiods. However once they hatched out there was no evidence that photoperiod affected statolith growth. After hatching, in all photoperiods statolith growth rates decreased in comparison with late embryonic rates. In S. australis embryos, differences between the high and medium light intensities for summer and intermediate photoperiods were found, suggesting that under summer incubation temperature, longer daylengths at medium light intensity favoured higher statolith growth for this species. In comparison to controls, slower statolith growth in S. australis embryos due to low salinity only occurred when exposed for 72 h. Comparison with previous studies indicates that temperature seems to be the main abiotic factor influencing statolith growth during early stages, however, interactions among all abiotic factors needs to be determined as well as the unknown influence of other isolated factors, e.g., oxygen concentration within the egg mass.

Description: Combined simultaneous satellite observations are used to evaluate the performance of parameterizations of the microphysical and optical properties of cirrus clouds used for radiative flux computations in climate models. Atmospheric and cirrus properties retrieved from Television and Infrared Observation Satellite (TIROS-N) Operational Vertical Sounder (TOVS) observations are given as input to the radiative transfer model developed for the Met Office climate model to simulate radiative fluxes at the top of the atmosphere (TOA). Simulated cirrus shortwave (SW) albedos are then compared to those retrieved from collocated Scanner for Radiation Budget (ScaRaB) observations. For the retrieval, special care has been given to angular direction models. Three parameterizations of cirrus ice crystal optical properties are represented in the Met Office radiative transfer model. These parameterizations are based on different physical approximations and different hypotheses on crystal habit. One parameterization assumes pristine ice crystals and two ice crystal aggregates. By relating the cirrus ice water path (IWP) retrieved from the effective infrared emissivity to the cirrus SW albedo, differences between the parameterizations are amplified. This study shows that pristine crystals seem to be plausible only for cirrus with IWP less than 30 g m−2. For larger IWP, ice crystal aggregates lead to cirrus SW albedos in better agreement with the observations. The data also indicate that climate models should allow the cirrus effective ice crystal diameter (De) to increase with IWP, especially in the range up to 30 g m−2. For cirrus with IWP less than 20 g m−2, this would lead to SW albedos that are about 0.02 higher than the ones of a constant De of 55 μm.

Description: Seasonal activities of the digestive enzyme trypsin were measured between August 1998 and May 1999 to study different nutritional strategies of the two copepods Pseudocalanus minutus and Oithona similis in the Arctic Kongsfjorden (Svalbard) using a highly sensitive fluorescence technique. Stage-, depth- and season-specific characteristics of digestive activity were reflected in the trypsin activity. P. minutus females and stage V copepodids (C) had highest trypsin activities in spring during reproduction (197.5 and 145.7 nmol min−1 ng C−1, respectively). In summer stages CIII–V and in autumn stages CIV and V had high activities (80–116 nmol min−1 ng C−1) in the shallow layer (〈 100 m) presumably as a consequence of prolonged feeding before descending to overwintering depth. Trypsin activities at depth (〉 100 m) in summer and autumn were low in stages CIII and CIV (29–60 nmol min−1 ng C−1) and in winter in all stages in both layers (20–43 nmol min−1 ng C−1). Based on low trypsin activity, males most likely did not feed. In O. similis, the spring phytoplankton bloom did not significantly affect trypsin activity as compared to the other seasons. O. similis CV and females had high trypsin activities in summer in the deep stratum (304.5 nmol min−1 ng C−1), which was concomitant with reproductive processes and energy storage for overwintering. In autumn, stage CV and female O. similis had significantly higher activities than stage CIV (130–152 versus 78 nmol min−1 ng C−1), which is in accordance with still ongoing developmental and reproductive processes in CVs and females. Comparisons of both species revealed different depth-related responses emphasizing different nutritional preferences: the mainly herbivorous P. minutus is more actively feeding in the shallow layer, where primary production occurs, whereas the omnivorous O. similis is not as much restricted to a certain depth layer, when searching for food. P. minutus had lower levels of trypsin activity during all seasons. In contrast to P. minutus, higher enzyme activities in males of O. similis suggest that they continue to feed and survive after fertilization of females.

Description: Natural heterogeneity in ecological parameters, like population abundance, is more widely recognized and investigated than variability in the processes that control these parameters. Experimental ecologists have focused mainly on the mean intensity of predictor variables and have largely ignored the potential to manipulate variances in processes, which can be considered explicitly in experimental designs to explore variation in causal mechanisms. In the present study, the effect of the temporal variance of disturbance on the diversity of marine assemblages was tested in a field experiment replicated at two sites on the northeast coast of New Zealand. Fouling communities grown on artificial settlement substrata experienced disturbance regimes that differed in their inherent levels of temporal variability and timing of disturbance events, while disturbance intensity was identical across all levels. Additionally, undisturbed assemblages were used as controls. After 150 days of experimental duration, the assemblages were then compared with regard to their species richness, abundance and structure. The disturbance effectively reduced the average total cover of the assemblages, but no consistent effect of variability in the disturbance regime on the assemblages was detected. The results of this study were corroborated by the outcomes from simultaneous replicate experiments carried out in each of eight different biogeographical regions around the world.

Description: A model of the subpolar North Atlantic Ocean is used to study different aspects of ventilation and water mass transformation during a year with moderate convection intensity in the Labrador Sea. The model realistically describes the salient features of the observed hydrographic structure and current system, including boundary currents and recirculations. Ventilation and transformation rates are defined and compared. The transformation rate of Labrador Sea Water (LSW), defined in analogy to several observational studies, is 6.3 Sv (Sv ≡ 106 m3 s−1) in the model. Using an idealized ventilation tracer, mimicking analyses based on chlorofluorocarbon inventories, an LSW ventilation rate of 10 Sv is found. Differences between both rates are particularly significant for those water masses that are partially transformed into denser water masses during winter. The main export route of the ventilated LSW is the deep Labrador Current (LC). Backward calculation of particle trajectories demonstrates that about one-half of the LSW leaving the Labrador Sea within the deep LC originates in the mixed layer during that same year. Near the offshore flank of the deep LC at about 55°W, the transformation of LSW begins in January and is at a maximum in February/March. While the export of transformed LSW out of the central Labrador Sea continues for several months, LSW generated near the boundary current is exported more rapidly, with maximum transport rates during March/April within the deep LC.

Description: Climate models predict a gradual weakening of the North Atlantic meridional overturning circulation (MOC) during the twenty-first century due to increasing levels of greenhouse gas concentrations in the atmosphere. Using an ensemble of 16 different coupled climate models performed for the Fourth Assessment Report (AR4) of the Intergovernmental Panel on Climate Change (IPCC), the evolution of the MOC during the twentieth and twenty-first centuries is analyzed by combining model simulations for the IPCC scenarios Twentieth-Century Climate in Coupled Models (20C3M) and Special Report on Emission Scenarios, A1B (SRESA1B). Earlier findings are confirmed that even for the same forcing scenario the model response is spread over a large range. However, no model predicts abrupt changes or a total collapse of the MOC. To reduce the uncertainty of the projections, different weighting procedures are applied to obtain “best estimates” of the future MOC evolution, considering the skill of each model to represent present day hydrographic fields of temperature, salinity, and pycnocline depth as well as observation-based mass transport estimates. Using different methods of weighting the various models together, all produce estimates that the MOC will weaken by 25%–30% from present day values by the year 2100; however, absolute values of the MOC and the degree of reduction differ among the weighting methods.

Description: An observational-based analysis of coupled variability in the equatorial Atlantic and its seasonality is presented. Regression analysis shows that the three elements of the Bjerknes positive feedback exist in the Atlantic and are spatially similar to those of the Pacific. The cross-correlation functions of the elements of the Bjerknes feedback are also similar and consistent with an ocean–atmosphere coupled mode. However, the growth rate in the Atlantic is up to 50% weaker, and explained variance is significantly lower. The Bjerknes feedback in the Atlantic is strong in boreal spring and summer, and weak in other seasons, which explains why the largest sea surface temperature anomalies (SSTAs) occur in boreal summer. Its seasonality is determined by seasonal variations in both atmospheric sensitivity to SSTA and SSTA sensitivity to subsurface temperature anomalies.

Description: Cephalopod movement occurs during all phases of the life history, with the abundance and location of cephalopod populations strongly influenced by the prevalence and scale of their movements. Environmental parameters, such as sea temperature and oceanographic processes, have a large influence on movement at the various life cycle stages, particularly those of oceanic squid. Tag recapture studies are the most common way of directly examining cephalopod movement, particularly in species which are heavily fished. Electronic tags, however, are being more commonly used to track cephalopods, providing detailed small- and large-scale movement information. Chemical tagging of paralarvae through maternal transfer may prove to be a viable technique for tracking this little understood cephalopod life stage, as large numbers of individuals could be tagged at once. Numerous indirect methods can also be used to examine cephalopod movement, such as chemical analyses of the elemental and/or isotopic signatures of cephalopod hard parts, with growing interest in utilising these techniques for elucidating migration pathways, as is commonly done for fish. Geographic differences in parasite fauna have also been used to indirectly provide movement information, however, explicit movement studies require detailed information on parasite-host specificity and parasite geographic distribution, which is yet to be determined for cephalopods. Molecular genetics offers a powerful approach to estimating realised effective migration rates among populations, and continuing developments in markers and analytical techniques hold the promise of more detailed identification of migrants. To date genetic studies indicate that migration in squids is extensive but can be blocked by major oceanographic features, and in cuttlefish and octopus migration is more locally restricted than predictions from life history parameters would suggest. Satellite data showing the location of fishing lights have been increasingly used to examine the movement of squid fishing vessels, as a proxy for monitoring the movement of the squid populations themselves, allowing for the remote monitoring of oceanic species.

Description: A fossil primnoid gorgonian skeleton (Octocorallia) was recovered on the eastern Galician Massif in the Bay of Biscay (NE Atlantic) from 720 m water depth. The skeleton shows a growth banding of alternating Mg–calcitic and organic (gorgonin) increments in the inner part, surrounded by a ring of massive fibrous calcite. Three calcite-dominated cycles, bounded by thick organic layers, consist of five light-dark couplets of calcite and gorgonin. Two AMS-14C datings of the fossil skeleton give ages of 10,880 and 10,820 ± 45 14C years before present (BP). We arrive at a calibrated age range of 11,829–10,072 cal. years BP (two σ), which comprises the late Younger Dryas to the earliest part of the Holocene. The cyclic calcitic–organic growth banding may be controlled by a constant rate of calcite secretion with a fluctuating rate of gorgonin production, possibly related to productivity cycles. The skeletal fabric change of alternating calcitic–organic increments to massive fibrous calcite may be the result of hydrographic changes during the deglaciation as reflected by preliminary stable isotope data. If this hypothesis proves to be correct, primnoid gorgonians are able to match with varying hydrodynamic conditions by changing their biomineralisation mode.

Description: During recent cruises aboard RV Polarstern in the Antarctic Peninsula region, a new species of benthic octopodid was discovered whose generic affinities based on morphological characteristics were uncertain. Molecular sequence analysis of six mitochondrial and nuclear genes allows this species to be placed with confidence within the genus Pareledone. The species is described herein and morphological diagnostic characters are provided for its identification.

Description: This study investigates the influence of El Niño on the upper-ocean circulation in the tropical Atlantic Ocean (via changes in the Atlantic trade winds) by analyzing observed sea surface temperature (SST) together with an ocean general circulation model integration forced by the NCEP–NCAR reanalysis. During periods with anomalously warm (cold) eastern equatorial Pacific SST, the southern Atlantic tropical cell is strengthened (weakened). The difference of the cell strength between El Niño and La Niña years is about 20% of the mean cell strength. However, the variability of the cell is not dominated by the remote forcing from the eastern equatorial Pacific but seems to be caused by intrinsic tropical Atlantic variability. A strengthening (weakening) for periods with anomalously warm (cold) eastern equatorial Pacific SST is also found for the zonal surface and subsurface currents. TOPEX/Poseidon altimetry data are used to validate the results based on the OGCM integration.

Description: High resolution studies from the Propeller Mound, a cold-water coral carbonate mound in the NE Atlantic, show that this mound consists of 〉50% carbonate justifying the name ‘carbonate mound’. Through the last ~300,000 years approximately one third of the carbonate has been contributed by cold-water corals, namely Lophelia pertusa and Madrepora oculata. This coral bound contribution to the carbonate budget of Propeller Mound is probably accompanied by an unknown portion of sediments buffered from suspension by the corals. However, extended hiatuses in Propeller Mound sequences only allow the calculation of a net carbonate accumulation. Thus, net carbonate accumulation for the last 175 kyr accounts for only 〈0.3 g/cm2/kyr, which is even less than for the off-mound sediments. These data imply that Propeller Mound faces burial by hemipelagic sediments as has happened to numerous buried carbonate mounds found slightly to the north of the investigated area.