ALBERT

Description: Biodiversity is critical for maintaining and stabilizing ecosystem processes. There is a need for high-resolution biodiversity maps that cover large sea areas in order to address ecological questions related to biodiversity-ecosystem functioning relationships and to provide data for marine environmental protection and management decisions. However, traditional sampling-point-wise field work is not suitable for covering extensive areas in high detail. Spatial predictive modeling using biodiversity data from sampling points and georeferenced environmental data layers covering the whole study area is a potential way to create biodiversity maps for large spatial extents. Random forest (RF), generalized additive models (GAM), and boosted regression trees (BRT) were used in this study to produce benthic (macroinvertebrates, macrophytes) biodiversity maps in the northern Baltic Sea. Environmental raster layers (wave exposure, salinity, temperature, etc.) were used as independent variables in the models to predict the spatial distribution of species richness. A validation dataset containing data that was not included in model calibration was used to compare the prediction accuracy of the models. Each model was also evaluated visually to check for possible modeling artifacts that are not revealed by mathematical validation. All three models proved to have high predictive ability. RF and BRT predictions had higher correlations with validation data and lower mean absolute error than those of GAM. Both mathematically and visually, the predictions by RF and BRT were very similar. Depth and seabed sediments were the most influential abiotic variables in predicting the spatial patterns of biodiversity.

Description: A long-standing difficulty of climate models is to capture the annual cycle (AC) of eastern equatorial Pacific (EEP) sea surface temperature (SST). In this study, we first examine the EEP SST AC in a set of integrations of the coupled Kiel Climate Model, in which only atmosphere model resolution differs. When employing coarse horizontal and vertical atmospheric resolution, significant biases in the EEP SST AC are observed. These are reflected in an erroneous timing of the cold tongue’s onset and termination as well as in an underestimation of the boreal spring warming amplitude. A large portion of these biases are linked to a wrong simulation of zonal surface winds, which can be traced back to precipitation biases on both sides of the equator and an erroneous low-level atmospheric circulation over land. Part of the SST biases also is related to shortwave radiation biases related to cloud cover biases. Both wind and cloud cover biases are inherent to the atmospheric component, as shown by companion uncoupled atmosphere model integrations forced by observed SSTs. Enhancing atmosphere model resolution, horizontal and vertical, markedly reduces zonal wind and cloud cover biases in coupled as well as uncoupled mode and generally improves simulation of the EEP SST AC. Enhanced atmospheric resolution reduces convection biases and improves simulation of surface winds over land. Analysis of a subset of models from the Coupled Model Intercomparison Project phase 5 (CMIP5) reveals that in these models, very similar mechanisms are at work in driving EEP SST AC biases.

Description: Methane gas hydrates have increasingly become a topic of interest because of their potential as a future energy resource. There are significant economical and environmental risks associated with extraction from hydrate reservoirs, so a variety of multiphysics models have been developed to analyze prospective risks and benefits. These models generally have a large number of empirical parameters which are not known a priori. Traditional optimization-based parameter estimation frameworks may be ill-posed or computationally prohibitive. Bayesian inference methods have increasingly been found effective for estimating parameters in complex geophysical systems. These methods often are not viable in cases of computationally expensive models and high-dimensional parameter spaces. Recently, methods have been developed to effectively reduce the dimension of Bayesian inverse problems by identifying low-dimensional structures that are most informed by data. Active subspaces is one of the most generally applicable methods of performing this dimension reduction. In this paper, Bayesian inference of the parameters of a state-of-the-art mathematical model for methane hydrates based on experimental data from a triaxial compression test with gas hydrate-bearing sand is performed in an efficient way by utilizing active subspaces. Active subspaces are used to identify low-dimensional structure in the parameter space which is exploited by generating a cheap regression-based surrogate model and implementing a modified Markov chain Monte Carlo algorithm. Posterior densities having means that match the experimental data are approximated in a computationally efficient way.

Description: The deglacial history of CO2 release from the deep North Pacific remains unresolved. This is due to conflicting indications about subarctic Pacific ventilation changes based on various marine proxies, especially for Heinrich Stadial 1 (HS-1) when a rapid atmospheric CO2 rise occurs. Here, we use a complex Earth System Model to investigate the deglacial North Pacific overturning and its control on ocean stratification. Our results show an enhanced intermediate-to-deep ocean stratification coeval with intensified North Pacific Intermediate Water (NPIW) formation during HS-1, compared to the Last Glacial Maximum. The stronger NPIW formation causes lower salinities and higher temperatures at intermediate depths. By lowering NPIW densities, this enlarges vertical density gradient and thus enhances intermediate-to-deep ocean stratification during HS-1. Physically, this process prevents the North Pacific deep waters from a better communication with the upper oceans, thus prolongs the existing isolation of glacial Pacific abyssal carbons during HS-1.

Description: A strong warm event occurred in the southeastern tropical Atlantic Ocean off Angola and Namibia in January and February 2016 with sea surface temperature anomalies reaching 3 °C. In contrast to classical Benguela Niño events, the analysis of various direct observations indicates that the warming was not predominantly forced by an equatorial Kelvin wave exciting a coastally trapped wave but instead resulted from a combination of local processes that are related to (1) a weakening of the alongshore, i.e. mainly southerly, winds and (2) enhanced freshwater input through local precipitation and river discharge. Consistent with the weakened winds, we find a reduction in latent heat loss from the ocean and a poleward surface current anomaly. The surface freshening, which is detected in satellite observations of sea surface salinity, caused a very shallow mixed layer and enhanced upper ocean stratification. This is supported by the analysis of the velocity structure of the Angola Current at 11°S, which shows that at the time of the event subsurface velocities were directed northward while surface velocities were directed southward. The shallow layer of warm and fresh surface water was thus advected poleward by the surface current. In addition, a reduction of the local upwelling and the formation of a barrier layer that inhibits the entrainment of cool subsurface waters into the surface mixed layer might have contributed to the warm surface anomaly. The sudden termination of the warm event was accompanied by a re-intensification of southerly winds in March

Description: Extratropical volcanic eruptions are commonly thought to be less effective at driving large-scale surface cooling than tropical eruptions. However, recent minor extratropical eruptions have produced a measurable climate impact, and proxy records suggest that the most extreme Northern Hemisphere cold period of the Common Era was initiated by an extratropical eruption in 536 CE. Using ice-core-derived volcanic stratospheric sulfur injections and Northern Hemisphere summer temperature reconstructions from tree rings, we show here that in proportion to their estimated stratospheric sulfur injection, extratropical explosive eruptions since 750 CE have produced stronger hemispheric cooling than tropical eruptions. Stratospheric aerosol simulations demonstrate that for eruptions with a sulfur injection magnitude and height equal to that of the 1991 Mount Pinatubo eruption, extratropical eruptions produce time-integrated radiative forcing anomalies over the Northern Hemisphere extratropics up to 80% greater than tropical eruptions, as decreases in aerosol lifetime are overwhelmed by the enhanced radiative impact associated with the relative confinement of aerosol to a single hemisphere. The model results are consistent with the temperature reconstructions, and elucidate how the radiative forcing produced by extratropical eruptions is strongly dependent on the eruption season and sulfur injection height within the stratosphere.

Description: Sponges host a remarkable diversity of microbial symbionts, however, the benefit their microbes provide is rarely understood. Here, we describe two new sponge species from deep-sea asphalt seeps and show that they live in a nutritional symbiosis with methane-oxidizing (MOX) bacteria. Metagenomics and imaging analyses revealed unusually high amounts of MOX symbionts in hosts from a group previously assumed to have low microbial abundances. These symbionts belonged to the Marine Methylotrophic Group 2 clade. They are host-specific and likely vertically transmitted, based on their presence in sponge embryos and streamlined genomes, which lacked genes typical of related free-living MOX. Moreover, genes known to play a role in host–symbiont interactions, such as those that encode eukaryote-like proteins, were abundant and expressed. Methane assimilation by the symbionts was one of the most highly expressed metabolic pathways in the sponges. Molecular and stable carbon isotope patterns of lipids confirmed that methane-derived carbon was incorporated into the hosts. Our results revealed that two species of sponges, although distantly related, independently established highly specific, nutritional symbioses with two closely related methanotrophs. This convergence in symbiont acquisition underscores the strong selective advantage for these sponges in harboring MOX bacteria in the food-limited deep sea.

Description: Periodic changes in sediment composition are usually ascribed to insolation forcing controlled by Earth’s orbital parameters. During the Cretaceous Thermal Maximum at 97–91 Myr ago (Ma), a 37–50-kyr-long cycle that is generally believed to reflect obliquity forcing dominates the sediment record. Here, we use a numerical ocean model to show that a cycle of this length can be generated by marine biogeochemical processes without applying orbital forcing. According to our model, the restricted proto-North Atlantic and Tethys basins were poorly ventilated and oscillated between iron-rich and sulfidic (euxinic) states. The Panthalassa Basin was fertilized by dissolved iron originating from the proto-North Atlantic. Hence, it was less oxygenated while the proto-North Atlantic was in an iron-rich state and better oxygenated during euxinic periods in the proto-North Atlantic. This redox see-saw was strong enough to create significant changes in atmospheric pCO2. We conclude that most of the variability in the mid-Cretaceous ocean–atmosphere system can be ascribed to the internal redox see-saw and its response to external orbital forcing.

Description: The potential for imminent abyssal polymetallic nodule exploitation has raised considerable scientific attention. The interface between the targeted nodule resource and sediment in this unusual mosaic habitat promotes the development of some of the most biologically diverse communities in the abyss. However, the ecology of these remote ecosystems is still poorly understood, so it is unclear to what extent and timescale these ecosystems will be affected by, and could recover from, mining disturbance. Using data inferred from seafloor photo-mosaics, we show that the effects of simulated mining impacts, induced during the “DISturbance and reCOLonization experiment” (DISCOL) conducted in 1989, were still evident in the megabenthos of the Peru Basin after 26 years. Suspension-feeder presence remained significantly reduced in disturbed areas, while deposit-feeders showed no diminished presence in disturbed areas, for the first time since the experiment began. Nevertheless, we found significantly lower heterogeneity diversity in disturbed areas and markedly distinct faunal compositions along different disturbance levels. If the results of this experiment at DISCOL can be extrapolated to the Clarion-Clipperton Zone, the impacts of polymetallic nodule mining there may be greater than expected, and could potentially lead to an irreversible loss of some ecosystem functions, especially in directly disturbed areas.

Description: Water strongly influences the physical properties of the mantle and enhances its ability to melt or convect. Its presence can also be used to trace recycling of surface reservoirs down to the deep mantle1, which makes knowledge of the water content in the Earth's interior and its evolution crucial for understanding global geodynamics. Komatiites (MgO-rich ultramafic magmas) result from a high degree of mantle melting at high pressures2 and thus are excellent probes of the chemical composition and water contents of the deep mantle. An excess of water over elements that show similar geochemical behaviour during mantle melting (for example, cerium) was recently found in melt inclusions in the most magnesium-rich olivine in 2.7-billion-year-old komatiites from Canada3 and Zimbabwe4. These data were taken as evidence for a deep hydrated mantle reservoir, probably the transition zone, in the Neoarchaean era (2.8 to 2.5 billion years ago). Here we confirm the mantle source of this water by measuring deuterium-to-hydrogen ratios in these melt inclusions and present similar data for 3.3-billion-year-old komatiites from the Barberton greenstone belt. From the hydrogen isotope ratios, we show that the mantle sources of these melts contained excess water, which implies that a deep hydrous mantle reservoir has been present in the Earth's interior since at least the Palaeoarchaean era (3.6 to 3.2 billion years ago). The reconstructed initial hydrogen isotope composition of komatiites is more depleted in deuterium than surface reservoirs or typical mantle but resembles that of oceanic crust that was initially altered by seawater and then dehydrated during subduction. Together with an excess of chlorine and depletion of lead in the mantle sources of komatiites, these results indicate that seawater-altered lithosphere recycling into the deep mantle, arguably by subduction, started before 3.3 billion years ago.

Description: Almost all the inorganic carbon on Earth is converted into biomass via the Calvin–Benson–Bassham (CBB) cycle. Here, the central carboxylation reaction is catalyzed by ribulose-1,5-bisphosphate carboxylase/oxygenase (RubisCO), which can be found in numerous primary producers including plants, algae, cyanobacteria, and many autotrophic bacteria. Although RubisCO possesses a crucial role in global biomass production, it is not a perfect catalyst. Therefore, research interest persists on accessing the full potential of yet unexplored RubisCOs. We recently developed an activity-based screen suited to seek active recombinant RubisCOs from the environment—independent of the native host’s culturability. Here, we applied this screen to twenty pre-selected genomic fosmid clones from six cultured proteobacteria to demonstrate that a broad range of phylogenetically distinct RubisCOs can be targeted. We then screened 12,500 metagenomic fosmid clones from six distinct hydrothermal vents and identified forty active RubisCOs. Additional sequence-based screening uncovered eight further RubisCOs, which could then also be detected by a modified version of the screen. Seven were active form III RubisCOs from yet uncultured Archaea. This indicates the potential of the activity-based screen to detect RubisCO enzymes even from organisms that would not be expected to be targeted.

Description: Oceanic anoxic events have been associated with warm climates in Earth history, and there are concerns that current ocean deoxygenation may eventually lead to anoxia. Here we show results of a multi-millennial global-warming simulation that reveal, after a transitory deoxygenation, a marine oxygen inventory 6% higher than preindustrial despite an average 3 °C ocean warming. An interior-ocean oxygen source unaccounted for in previous studies explains two thirds of the oxygen excess reached after a few thousand years. It results from enhanced denitrification replacing part of today’s ocean’s aerobic respiration in expanding oxygen-deficient regions: The resulting loss of fixed nitrogen is equivalent to an oceanic oxygen gain and depends on an incomplete compensation of denitrification by nitrogen fixation. Elevated total oxygen in a warmer ocean with larger oxygen-deficient regions poses a new challenge for explaining global oceanic anoxic events and calls for an improved understanding of environmental controls on nitrogen fixation.

Description: Ocean acidification is expected to negatively impact calcifying organisms, yet we lack understanding of their acclimation potential in the natural environment. Here we measured geochemical proxies (δ11B and B/Ca) in Porites astreoides corals that have been growing for their entire life under low aragonite saturation (Ωsw: 0.77–1.85). This allowed us to assess the ability of these corals to manipulate the chemical conditions at the site of calcification (Ωcf), and hence their potential to acclimate to changing Ωsw. We show that lifelong exposure to low Ωsw did not enable the corals to acclimate and reach similar Ωcf as corals grown under ambient conditions. The lower Ωcf at the site of calcification can explain a large proportion of the decreasing P. astreoides calcification rates at low Ωsw. The naturally elevated seawater dissolved inorganic carbon concentration at this study site shed light on how different carbonate chemistry parameters affect calcification conditions in corals.

Description: In the Arctic Ocean ice algae constitute a key ecosystem component and the ice algal spring bloom a critical event in the annual production cycle. The bulk of ice algal biomass is usually found in the bottom few cm of the sea ice and dominated by pennate diatoms attached to the ice matrix. Here we report a red tide of the phototrophic ciliate Mesodinium rubrum located at the ice-water interface of newly formed pack ice of the high Arctic in early spring. These planktonic ciliates are not able to attach to the ice. Based on observations and theory of fluid dynamics, we propose that convection caused by brine rejection in growing sea ice enabled M. rubrum to bloom at the ice-water interface despite the relative flow between water and ice. We argue that red tides of M. rubrum are more likely to occur under the thinning Arctic sea ice regime

Description: Rhodophyta (red algae) is one of three lineages of Archaeplastida1, a supergroup that is united by the primary endosymbiotic origin of plastids in eukaryotes2,3. Red algae are a diverse and species-rich group, members of which are typically photoautotrophic, but are united by a number of highly derived characteristics: they have relatively small intron-poor genomes, reduced metabolism and lack cytoskeletal structures that are associated with motility, flagella and centrioles. This suggests that marked gene loss occurred around their origin4; however, this is difficult to reconstruct because they differ so much from the other archaeplastid lineages, and the relationships between these lineages are unclear. Here we describe the novel eukaryotic phylum Rhodelphidia and, using phylogenomics, demonstrate that it is a closely related sister to red algae. However, the characteristics of the two Rhodelphis species described here are nearly opposite to those that define red algae: they are non-photosynthetic, flagellate predators with gene-rich genomes, along with a relic genome-lacking primary plastid that probably participates in haem synthesis. Overall, these findings alter our views of the origins of Rhodophyta, and Archaeplastida evolution as a whole, as they indicate that mixotrophic feeding—that is, a combination of predation and phototrophy—persisted well into the evolution of the group.

Description: Fluctuations in abundance of dominant species can cause competitive release of resources with consequences on community structure and functioning. In the present study, changes in the intertidal macroinfauna community of an exposed sandy beach were evaluated during two contrasting periods characterized by low and high densities of the yellow clam Amarilladesma mactroides. The increase in clam abundance and biomass was associated with a significant decrease in abundance of the rest of the community. In particular, a decline was observed for the pea crab Austinixa patagoniensis, a commensal species that lives in the burrows of the shrimp Sergio mirim. Our study demonstrates that fluctuations in clam abundance lead to long-term changes in community structure, suggesting the presence of competitive interactions. The environmental stability over the two periods strengthens the hypothesis that the competition between species is crucial for shaping the ecological community. Stable isotope analysis allows discarding trophic competition as mechanism of exclusion. Image maps reveal complementary distribution of species, showing the relevance of the spatial competition, which is mediated by changes in abundance of a third species. Indeed, high densities of A. mactroides reduce the available area for the establishment of the S. mirim burrows, limiting the foraging behavior of its commensal, the pea crab. Such an interaction drives density-dependent exclusion of the pea crab from the intertidal zone following the establishment of the yellow clam population. This study illustrates that spatial competition triggered by the increase of a bed-forming species can have community-wide consequences in exposed sandy beaches

Description: The NW-SE striking volcanic front in Nicaragua is dissected into a western and an eastern segment separated by 20 km of N-S offset. The Chiltepe volcanic complex lies at the eastern end of the western segment and at the northern tip of the Nejapa-Miraflores tectonic and volcanic lineament that traces the arc offset. The Chiltepe peninsula attained its present shape and composition during highly explosive and effusive volcanic activity through the Late Pleistocene and Holocene, which formed the Chiltepe Formation (CF) and culminated in the 1.9 ka plinian eruption of the Chiltepe tephra. The previous evolution of this volcanic system is recorded in the volcaniclastic Mateare Formation (MF) exposed west (downwind) of the peninsula and separated from the CF by a large regional erosional unconformity. We divide the MF into the lower MF-1 member (22 volcaniclastic units) and the upper MF-2 member (17 volcaniclastic units), which are separated by a major erosional unconformity. The MF-1 was formed by variably evolved (basalt to dacite) magmas from a mantle source that was moderately metasomatized by fluids derived from subducted sediments. These high-Al moderately hydrous magmas fractionated in a tholeiitic fashion, with early plagioclase but delayed magnetite fractionation (initial Fe-Ti enrichments). Apart from the variable degree of differentiation, magmatic conditions during MF-1 remained fairly constant. While MF-1 contains several erosional unconformities suggesting tectonic activity, MF-2 is conformably stratified and the tholeiitic magmas persisted during this time. However, during MF-2, Al-poor tholeiitic compositions gradually replaced the Al-rich of MF-1 without significant changes in metasomatism or degree of melting at their mantle sources. At the same time, a different mantle source was tapped that was richer in the sediment components, and which produced more hydrous magmas that differentiated in a calc-alkaline fashion with early fractionation of both plagioclase and magnetite. Hence, two mantle source compositions were active during MF-2. The erosional interval between MF and CF, associated with strike-slip motion at the Mateare Fault, correlates with initiation of Nejapa-Miraflores volcanism. We postulate that extension along the Najapa-Miraflores fault system facilitated rapid ascent of mafic magmas from a mantle source laterally away from the arc axis that was less metasomatized than sources directly below the arc. On the Chiltepe peninsula, the Nejapa-Miraflores and Chiltepe magma systems interacted to form tholeiitic, less hydrous types of magmas (andesite to dacite) that erupted intermittently with the dominant calc-alkaline hydrous dacites. While associations of tholeiitic and calc-alkaline magmas at other subduction zones have often been attributed to variable intracrustal processes, we here argue for changes in the mantle source, particularly hydration by slab-derived fluids, as the main control on subsequent differentiation behavior. We further attribute the long-term changes in mantle source conditions through MF and CF, possibly over about 1 My, to result from temporal heterogeneity caused by mantle wedge solid flow and possibly variable fluid flow from the slab.

Description: Marine phytoplankton growth at high latitudes is extensively limited by iron availability. Icebergs are a vector transporting the bioessential micronutrient iron into polar oceans. Therefore, increasing iceberg fluxes due to global warming have the potential to increase marine productivity and carbon export, creating a negative climate feedback. However, the magnitude of the iceberg iron flux, the subsequent fertilization effect and the resultant carbon export have not been quantified. Using a global analysis of iceberg samples, we reveal that iceberg iron concentrations vary over 6 orders of magnitude. Our results demonstrate that, whilst icebergs are the largest source of iron to the polar oceans, the heterogeneous iron distribution within ice moderates iron delivery to offshore waters and likely also affects the subsequent ocean iron enrichment. Future marine productivity may therefore be not only sensitive to increasing total iceberg fluxes, but also to changing iceberg properties, internal sediment distribution and melt dynamics.

Description: Background The interplay between hosts and their associated microbiome is now recognized as a fundamental basis of the ecology, evolution, and development of both players. These interdependencies inspired a new view of multicellular organisms as “metaorganisms.” The goal of the Collaborative Research Center “Origin and Function of Metaorganisms” is to understand why and how microbial communities form long-term associations with hosts from diverse taxonomic groups, ranging from sponges to humans in addition to plants. Methods In order to optimize the choice of analysis procedures, which may differ according to the host organism and question at hand, we systematically compared the two main technical approaches for profiling microbial communities, 16S rRNA gene amplicon and metagenomic shotgun sequencing across our panel of ten host taxa. This includes two commonly used 16S rRNA gene regions and two amplification procedures, thus totaling five different microbial profiles per host sample. Conclusion While 16S rRNA gene-based analyses are subject to much skepticism, we demonstrate that many aspects of bacterial community characterization are consistent across methods. The resulting insight facilitates the selection of appropriate methods across a wide range of host taxa. Overall, we recommend single- over multi-step amplification procedures, and although exceptions and trade-offs exist, the V3 V4 over the V1 V2 region of the 16S rRNA gene. Finally, by contrasting taxonomic and functional profiles and performing phylogenetic analysis, we provide important and novel insight into broad evolutionary patterns among metaorganisms, whereby the transition of animals from an aquatic to a terrestrial habitat marks a major event in the evolution of host-associated microbial composition.

Description: Oceanic emissions represent a highly uncertain term in the natural atmospheric methane (CH4) budget, due to the sparse sampling of dissolved CH4 in the marine environment. Here we overcome this limitation by training machine-learning models to map the surface distribution of methane disequilibrium (∆CH4). Our approach yields a global diffusive CH4 flux of 2-6TgCH4yr-1 from the ocean to the atmosphere, after propagating uncertainties in ∆CH4 and gas transfer velocity. Combined with constraints on bubble-driven ebullitive fluxes, we place total oceanic CH4 emissions between 6-12TgCH4yr-1, narrowing the range adopted by recent atmospheric budgets (5-25TgCH4yr-1) by a factor of three. The global flux is dominated by shallow near-shore environments, where CH4 released from the seafloor can escape to the atmosphere before oxidation. In the open ocean, our models reveal a significant relationship between ∆CH4 and primary production that is consistent with hypothesized pathways of in situ methane production during organic matter cycling.

Description: Phytoplankton and associated microbial communities provide organic carbon to oceanic food webs and drive ecosystem dynamics. However, capturing those dynamics is challenging. Here, an in situ, semi-Lagrangian, robotic sampler profiled pelagic microbes at 4 h intervals over ~2.6 days in North Pacific high-nutrient, low-chlorophyll waters. We report on the community structure and transcriptional dynamics of microbes in an operationally large size class (〉5 μm) predominantly populated by dinoflagellates, ciliates, haptophytes, pelagophytes, diatoms, cyanobacteria (chiefly Synechococcus), prasinophytes (chiefly Ostreococcus), fungi, archaea, and proteobacteria. Apart from fungi and archaea, all groups exhibited 24-h periodicity in some transcripts, but larger portions of the transcriptome oscillated in phototrophs. Periodic photosynthesis-related transcripts exhibited a temporal cascade across the morning hours, conserved across diverse phototrophic lineages. Pronounced silica:nitrate drawdown, a high flavodoxin to ferredoxin transcript ratio, and elevated expression of other Fe-stress markers indicated Fe-limitation. Fe-stress markers peaked during a photoperiodically adaptive time window that could modulate phytoplankton response to seasonal Fe-limitation. Remarkably, we observed viruses that infect the majority of abundant taxa, often with total transcriptional activity synchronized with putative hosts. Taken together, these data reveal a microbial plankton community that is shaped by recycled production and tightly controlled by Fe-limitation and viral activity.

Description: Proxy-based reconstructions and modeling of Holocene spatiotemporal precipitation patterns for China and Mongolia have hitherto yielded contradictory results indicating that the basic mechanisms behind the East Asian Summer Monsoon and its interaction with the westerly jet stream remain poorly understood. We present quantitative reconstructions of Holocene precipitation derived from 101 fossil pollen records and analyse them with the help of a minimal empirical model. We show that the westerly jet-stream axis shifted gradually southward and became less tilted since the middle Holocene. This was tracked by the summer monsoon rain band resulting in an early-Holocene precipitation maximum over most of western China, a mid-Holocene maximum in north-central and northeastern China, and a late-Holocene maximum in southeastern China. Our results suggest that a correct simulation of the orientation and position of the westerly jet stream is crucial to the reliable prediction of precipitation patterns in China and Mongolia.

Description: Sediment community oxygen consumption (SCOC) rates provide important information about biogeochemical processes in marine sediments and the activity of benthic microorganisms and fauna. Therefore, several databases of SCOC data have been compiled since the mid-1990s. However, these earlier databases contained much less data records and were not freely available. Additionally, the databases were not transparent in their selection procedure, so that other researchers could not assess the quality of the data. Here, we present the largest, best documented, and freely available database of SCOC data compiled to date. The database is comprised of 3,540 georeferenced SCOC records from 230 studies that were selected following the procedure for systematic reviews and meta-analyses. Each data record states whether the oxygen consumption was measured ex situ or in situ , as total oxygen uptake, diffusive or advective oxygen uptake, and which measurement device was used. The database will be curated and updated annually to secure and maintain an up-to-date global database of SCOC data.

Description: Olivine-hosted melt inclusions are commonly used to determine pre-eruptive storage conditions. However, this approach relies on the assumption that co-erupted olivines have a simple association with their carrier melts. We show that primitive olivine crystal cargoes and their melt inclusions display a high degree of geochemical disequilibrium with their carrier melts at Kīlauea Volcano, Hawai’i. Within a given eruption, melt inclusions trapped in primitive olivine crystals exhibit compositional diversity exceeding that in erupted lava compositions since 1790 CE. This demonstrates that erupting liquids scavenge crystal cargoes from mush piles accumulating diverse melt inclusion populations over timescales of centuries or longer. Entrainment of hot primitive olivines into cooler, evolved carrier melts drives post-entrapment crystallization and sequestration of CO2 into vapour bubbles, producing spurious barometric estimates. While scavenged melt inclusion records may not be suitable for the investigation of eruption-specific processes, they record timescales of crystal storage and remobilization within magmatic mush piles.

Description: The increasing use of rare earth elements (REEs) in diverse technological applications has augmented the demand and exploitation of these worldwide, leading to a higher input of REEs + Yttrium (Y) in the marine environment. The present study investigated the ecotoxicity of Lanthanum (La) and Y to Mytilus galloprovincialis developing embryos and juveniles. This was achieved by quantifying the embryogenesis success after 48 h, and survival of juveniles after 96 h of exposure to different concentrations of La and Y. Results show that both La and Y are more toxic to developing embryos and larvae than to juveniles of M. galloprovincialis. Predicted no-effect concentration (PNEC) values were also derived for the embryo development as a preliminary approach to assess the environmental risk for these compounds to marine organisms. Results revealed that La is more toxic than Y. The high sensitivity of the early developmental stages to these compounds highlight the relevance of including these stages when evaluating the toxicity of chemicals where little information is available. Although older life stages may be more tolerant to toxicants, the population survival will be compromised if new recruits are not viable, with implications to the whole ecosystem health and functioning of the impacted area. Information on the ecotoxicity of chemicals with expanded technological use and that may be released during deep-sea mining activities is urgent in order to help estimate environmental impacts.

Description: Abyssal plains of the Clarion Clipperton Fracture Zone (CCZ) in the NE Pacific Ocean probably harbour one of the world’s most diverse ecosystems. Gaining a basic understanding of the mechanisms underlying the evolution and persistence of CCZ biodiversity in terms of biogeography and connectivity has both scientific merit and informs the development of policy related to potential future deep-sea mining of mineral resources at an early stage in the process. Existing archives of polychaetes and isopods were sorted using a combined molecular and morphological approach, which uses nucleotide sequences (cytochrome c oxidase subunit I (COI)) and morphological information to identify appropriate sample sets for further investigations. Basic patterns of genetic diversity, divergence and demographic history of five polychaete and five isopod species were investigated. Polychaete populations were found to be genetically diverse. Pronounced long- and short-distance dispersal produces large populations that are continuously distributed over large geographic scales. Although analyses of isopod species suggest the same, spatial genetic structuring of populations do imply weak barriers to gene flow. Mining-related, large-scale habitat destruction has the potential to impact the continuity of both isopod and polychaete populations as well as their long-term dispersal patterns, as ecosystem recovery after major impacts is predicted to occur slowly at evolutionary time scales.

Description: A vast array of microorganisms from all three domains of life can produce electrical current and transfer electrons to the anodes of different types of bioelectrochemical systems. These exoelectrogens are typically iron-reducing bacteria, such as Geobacter sulfurreducens, that produce high power densities at moderate temperatures. With the right media and growth conditions, many other microorganisms ranging from common yeasts to extremophiles such as hyperthermophilic archaea can also generate high current densities. Electrotrophic microorganisms that grow by using electrons derived from the cathode are less diverse and have no common or prototypical traits, and current densities are usually well below those reported for model exoelectrogens. However, electrotrophic microorganisms can use diverse terminal electron acceptors for cell respiration, including carbon dioxide, enabling a variety of novel cathode-driven reactions. The impressive diversity of electroactive microorganisms and the conditions in which they function provide new opportunities for electrochemical devices, such as microbial fuel cells that generate electricity or microbial electrolysis cells that produce hydrogen or methane.

Description: The Earth will exhibit continued global surface warming in response to a sustained increase of atmospheric carbon dioxide (CO2) levels. Massive meltwater input from the Antarctic ice sheet into the Southern Ocean could be one consequence of this warming. Here we investigate the impacts which this meltwater input may have on Earth’s surface climate and ocean circulation in a warming world. To this end a set of ensemble experiments has been conducted with a global climate model forced by increasing atmospheric CO2-concentration and an idealized Antarctic meltwater input to the Southern Ocean with varying amplitude and spatial pattern. As long as the atmospheric CO2-concentration stays moderate, i.e. below approximately twice the preindustrial concentration, and if a strong meltwater forcing of either 0.05 or 0.1 Sv is applied, enhanced Antarctic sea–ice cover and surface air temperature cooling over most parts of the Southern Ocean is observed. When the atmospheric CO2-concentration becomes larger than twice the preindustrial concentration, the meltwater only plays a minor role. The Antarctic meltwater drives significant slowing of the Southern Ocean meridional overturning circulation (MOC). Again, the meltwater influence only is detectable as long as the CO2-forcing is moderate. Much larger MOC changes develop in response to highly elevated atmospheric CO2-levels independent of whether or not a meltwater forcing is applied. The response of the Antarctic circumpolar current (ACC) is nonlinear. Substantial and persistent ACC slowing is simulated when solely the meltwater forcing of 0.1 Sv is applied, which is due to the halt of Weddell Sea deep convection and subsequent collapse of the Southern Ocean MOC. When the increasing atmospheric CO2-concentration additionally drives the model the ACC partly recovers in the long run. The partial recovery is due to strengthening westerly wind stress over the Southern Ocean, which intensifies the Ekman Cell. This study suggests that Southern Hemisphere climate projections for the twenty-first century could benefit from incorporating interactive Antarctic ice sheet.

Description: An interactive (multi-access) global identification key (OncIdent) has been developed for the pelagic marine microcopepod family Oncaeidae and made accessible online. Details of the general approach and development of the key are given in Bottger-Schnack and Schnack (J Nat Hist 49:2727-2741, 2015). After beta-testing, new additions include illustrations for all species and feature attributes considered, plus a textual summary of each species' feature states in the key. Additional taxonomic notes are given where required, highlighting morphological or molecular genetic peculiarities or problems, with links to large data bases leading directly to more comprehensive information about each species. The present paper briefly reviews the taxonomic background for key construction, summarizes the opportunities and limitations of the current online version OncIdent2.0, and provides guidance for its practical use.