ALBERT

Description: Experimental studies linking community composition to functioning are typically confined to small and closed micro- or mesocosms. Such restricted conditions may affect both species’ biology and their environment. Yet, targeting simple features in the behaviour of species may circumvent these constraints. Focusing on ecological functions provided by dung beetles, we test whether large, open-top cages – MESOCLOSURES – will intercept the flight trajectories of beetles, thereby allowing manipulation of local community composition. MESOCLOSURES were built in both tropical forest (Brazil) and temperate grasslands (Finland), thus testing their general efficiency. Within the respective environments, we varied different aspects of MESOCLOSURE design: in the tropical forest, we examined the impact of MESOCLOSURE dimensions on exclusion efficiency, whereas in the temperate grassland, we assessed the potential for selectively excluding and including community members by different mesh sizes. In the temperate environment, we also went from method to application, using MESOCLOSURES to relate community composition to functioning under two simulated grazing regimes. MESOCLOSURES allowed efficient manipulation of dung beetle communities, maintaining dung beetle densities at intended levels in both temperate and tropical systems. In the tropics, the smallest cages (1 × 1 m) offered the highest contrast in beetle densities inside vs. outside of the fence, whereas the largest cages (9 × 9 m) offered the lowest. Nonetheless, densities inside cages never exceed one-fifth of those outside. At the temperate site, manipulations of community structure through mesh size yielded significant differences in functioning and suggested an interaction between small dung-dwelling species and large tunnelling species. Within cages, higher grazing was reflected in augmented dung removal. We conclude that MESOCLOSURES can be effectively used to study dung beetle functions across habitats and latitudes. As applied insights, the present study adds resolution to the significance of different functional groups of dung beetles and shows that grazing pressure may have an important impact on the ecosystem functions that they provide. Overall, this study suggests that targeted manipulation of dispersal may offer new solutions for linking fauna to ecosystem functions with minimal impact on the processes measured.

Description: At the largest time and space scales, the pace of erosion and chemical weathering is determined by tectonic uplift rates. Deviations from equilibrium arise from the transient response of landscape denudation to climatic and tectonic perturbations. We posit that the constraint of mass balance, however, makes it unlikely that such disequilibrium persists at the global scale over millions of years, as has been proposed for late Cenozoic erosion. We synthesize weathering fluxes, global sedimentation rates, sediment yields and tectonic motions to show a remarkable constancy in the pace of Earth-surface evolution over the last 10 Ma and support the null hypothesis – that global rates of landscape change have remained constant over this time period, despite global climate change and mountain building events. This work undermines the hypothesis that increased weathering due to mountain building or climate change was the primary agent for a decrease in global temperatures.

Description: Intercellular adhesion molecule-1 (ICAM-1) is distributed and expressed on cell surface and is present in circulation as soluble form (sICAM-1). Tumor necrosis factor-alpha (TNFα) and radical oxygen species (ROS) up-regulate the expression of ICAM-1. This study demonstrates for the first time in 18 Co cells, a myofibroblast cell line derived from human colonic mucosa, an up-regulation of ICAM-1 expression and sICAM-1 release induced by oxidative stress and TNFα stimulation. The intracellular redox state was modulated by L-buthionine-S,R-sulfoximine (BSO) or N-acetylcysteine (NAC), inhibitor and precursor respectively of GSH synthesis. ROS production increases in cells treated with BSO or TNFα, and this has been related to an up-regulation of ICAM-1 expression and sICAM-1 release. The involvement of metalloproteinases in ICAM-1 release has been demonstrated. Moreover, also expression and activation of A disintegrin and metalloproteinase 17, a membrane-bound enzyme known as TNFα-converting enzyme (TACE), have been related to ROS levels. This suggests the possible involvement of TACE in the cleavage of ICAM-1 on cell surface in condition of oxidative stress. NAC down-regulates the expression and release of ICAM-1 as well as the expression and activation of TACE. However, in TNFα stimulated cells NAC treatment reduces only in part ICAM-1 expression and sICAM-1 release. Given this TNFα may also act on these events by a redox-independent mechanism.

Description: Throughout at least the past several centuries, El Niño-Southern Oscillation (ENSO) has played a significant role in human response to climate. Over time, increased attention on ENSO has led to a better understanding of both the physical mechanisms, and the environmental and societal consequences of the phenomenon. The prospects for seasonal climate forecasting emerged from ENSO studies, and were first pursued in ENSO studies. In this paper, we review ENSO's impact on society, specifically with regard to agriculture, water, and health; we also explore the extent to which ENSO-related forecasts are used to inform decision making in these sectors. We find that there are significant differences in the uptake of forecasts across sectors, with the highest use in agriculture, intermediate use in water resources management, and the lowest in health. Forecast use is low in areas where ENSO linkages to climate are weak, but the strength of this linkage alone does not guarantee use. Moreover, the differential use of ENSO forecasts by sector shows the critical role of institutions that work at the boundary between science and society. In a long-term iterative process requiring continual maintenance, these organizations serve to enhance the salience, credibility, and legitimacy of forecasts and related climate services. WIREs Clim Change 2015, 6:17–34. doi: 10.1002/wcc.294.

Description: The analysis of high-resolution vector magnetic data acquired by deep-sea submersibles (DSSs) requires the development of specific approaches adapted to their uneven tracks. We present a method that takes advantage of (1) the varying altitude of the DSS above the seafloor and (2) high-resolution multibeam bathymetric data acquired separately, at higher altitude, by an Autonomous Underwater Vehicle, to estimate the absolute magnetization intensity and the magnetic polarity of the shallow subseafloor along the DSS path. We apply this method to data collected by DSS Nautile on a small active basalt-hosted hydrothermal site. The site is associated with a lack of magnetization, in agreement with previous findings at the same kind of sites: the contrast between nonmagnetic sulfide deposits/stockwork zone and strongly magnetized basalt is sufficient to explain the magnetic signal observed at such a low altitude. Both normal and reversed polarities are observed in the lava flows surrounding the site, suggesting complex history of accumulating volcanic flows.

Description: Current limitations in technology have prevented an extensive analysis of the connections among neurons, particularly within nonmammalian organisms. We developed a transsynaptic viral tracer originally for use in mice, and then tested its utility in a broader range of organisms. By engineering the vesicular stomatitis virus (VSV) to encode a fluorophore and either the rabies virus glycoprotein (RABV-G) or its own glycoprotein (VSV-G), we created viruses that can transsynaptically label neuronal circuits in either the retrograde or anterograde direction, respectively. The vectors were investigated for their utility as polysynaptic tracers of chicken and zebrafish visual pathways. They showed patterns of connectivity consistent with previously characterized visual system connections, and revealed several potentially novel connections. Further, these vectors were shown to infect neurons in several other vertebrates, including Old and New World monkeys, seahorses, axolotls, and Xenopus. They were also shown to infect two invertebrates, Drosophila melanogaster, and the box jellyfish, Tripedalia cystophora, a species previously intractable for gene transfer, although no clear evidence of transsynaptic spread was observed in these species. These vectors provide a starting point for transsynaptic tracing in most vertebrates, and are also excellent candidates for gene transfer in organisms that have been refractory to other methods.

Description: The diversity of stony corals displays one of the most exemplary latitudinal gradients on the planet, yet the evolutionary dynamics that produced this pattern remains unclear. Using both paleontological and distributional data, we compare the origination, extinction and immigration levels between low and high latitudes since the earliest proliferation of the group during the mid‐Triassic. Altogether, first and last occurrence localities in the fossil record do not support a positive preference towards either latitudinal bin. Nonetheless, considering past and present scleractinian fauna, the process of extinction has been apparently more pronounced at higher latitudes based on face values and correlation coefficients. Far above these differences, immigration of extant taxa has been substantially higher towards the tropics than to temperate regions. While the net dispersal toward low latitudes persists in all temporal intervals, the gradient of diversity was largely built up during the Cenozoic Era and only becomes significantly steep from the Neogene Period onwards. This dynamic supports the ‘into the tropical museum’ model, which suggests that tropics have historically acted as a center of accumulation for marine biodiversity.

Description: The movement of magma through the shallow crust and the impact of subsurface sill complexes on the hydrocarbon systems of prospective sedimentary basins has long been an area of interest and debate. Based on 3D seismic reflection and well data, we present a regional analysis of the emplacement and magmatic plumbing system of the Palaeogene Faroe‐Shetland Sill Complex (FSSC), which is intruded into the Mesozoic and Cenozoic sequences of the Faroe‐Shetland Basin (FSB). Identification of magma flow directions through detailed seismic interpretation of approximately 100 sills indicates that the main magma input zones into the FSB were controlled primarily by the NE–SW basin structure that compartmentalise the FSB into its constituent sub‐basins. An analysis of well data shows that potentially up to 88% of sills in the FSSC are 〈40 m in thickness, and thus below the vertical resolution limit of seismic data at depths at which most sills occur. This resolution limitation suggests that caution needs to be exercised when interpreting magmatic systems from seismic data alone, as a large amount of intrusive material could potentially be missed. The interaction of the FSSC with the petroleum systems of the FSB is not well understood. Given the close association between the FSSC and potential petroleum migration routes into some of the oil/gas fields (e.g. Tormore), the role the intrusions may have played in compartmentalisation of basin fill needs to be taken fully into account to further unlock the future petroleum potential of the FSB.

Description: Mesoscale eddies are ubiquitous features in the Southern Ocean, yet their phenomenology is not well quantified. To tackle this task, we use satellite observations of sea level anomalies and sea surface temperature (SST) as well as in situ temperature and salinity measurements from profiling floats. Over the period 1997–2010, we identified over a million mesoscale eddy instances and were able to track about 105 of them over 1 month or more. The Antarctic Circumpolar Current (ACC), the boundary current systems, and the regions where they interact are hot spots of eddy presence, representing also the birth places and graveyards of most eddies. These hot spots contrast strongly to areas shallower than about 2000 m, where mesoscale eddies are essentially absent, likely due to topographical steering. Anticyclones tend to dominate the southern subtropical gyres, and cyclones the northern flank of the ACC. Major causes of regional polarity dominance are larger formation numbers and lifespans, with a contribution of differential propagation pathways of long-lived eddies. Areas of dominance of one polarity are generally congruent with the same polarity being longer-lived, bigger, of larger amplitude, and more intense. Eddies extend down to at least 2000 m. In the ACC, eddies show near surface temperature and salinity maxima, whereas eddies in the subtropical areas generally have deeper anomaly maxima, presumably inherited from their origin in the boundary currents. The temperature and salinity signatures of the average eddy suggest that their tracer anomalies are a result of both trapping in the eddy core and stirring.

Description: Genome-scan methods are used for screening genomewide patterns of DNA polymorphism to detect signatures of positive selection. There are two main types of methods: (i) ‘outlier’ detection methods based on inline image that detect loci with high differentiation compared to the rest of the genome and (ii) environmental association methods that test the association between allele frequencies and environmental variables. We present a new inline image-based genome-scan method, BayeScEnv, which incorporates environmental information in the form of ‘environmental differentiation’. It is based on the F model, but, as opposed to existing approaches, it considers two locus-specific effects: one due to divergent selection and the other due to various other processes different from local adaptation (e.g. range expansions, differences in mutation rates across loci or background selection). The method was developped in C++ and is available at http://github.com/devillemereuil/bayescenv. A simulation study shows that our method has a much lower false positive rate than an existing inline image-based method, BayeScan, under a wide range of demographic scenarios. Although it has lower power, it leads to a better compromise between power and false positive rate. We apply our method to a human data set and show that it can be used successfully to study local adaptation. We discuss its scope and compare it to other existing methods.

Description: In a recent letter, Thomsen and Wernberg (2015) reanalyzed data compiled for our recent paper (Lyons et al. 2014). In that paper, we examined the effects of macroalgal blooms and macroalgal mats on seven important measures of community structure and ecosystem functioning, and explored several ecological and methodological factors that might explain some of the variation in the observed effects. Thomsen and Wernberg (2015) reanalyzed two small subsets of the data, focusing on experimental studies examining effects of blooms/mats on invertebrate abundance. Their analyses revealed two interesting patterns.

Description: The diversity of stony corals displays one of the most exemplary latitudinal gradients on the planet, yet the evolutionary dynamics that produced this pattern remains unclear. Using both paleontological and distributional data, we compare the origination, extinction and immigration levels between low and high latitudes since the earliest proliferation of the group during the mid-Triassic. Altogether, first and last occurrence localities in the fossil record do not support a positive preference towards either latitudinal bin. Nonetheless, considering past and present scleractinian fauna, the process of extinction has been apparently more pronounced at higher latitudes based on face values and correlation coefficients. Far above these differences, immigration of extant taxa has been substantially higher towards the tropics than to temperate regions. While the net dispersal toward low latitudes persists in all temporal intervals, the gradient of diversity was largely built up during the Cenozoic Era and only becomes significantly steep from the Neogene Period onwards. This dynamic supports the ‘into the tropical museum’ model, which suggests that tropics have historically acted as a center of accumulation for marine biodiversity.

Description: Palaeoglaciological reconstructions of the North Sea sector of the last British Ice Sheet have, as other shelf areas, suffered from a lack of dates directly related to ice-front positions. In the present study new high-resolution TOPAS seismic data, bathymetric records and sediment core data from the Witch Ground Basin, central North Sea, were compiled. This compilation made it possible to map out three ice-marginal positions, partly through identification of terminal moraines and partly through location of glacial-fed debrisflows. The interfingering of the distal parts of the glacial-fed debrisflows with continuous marine sedimentation enabled the development of a chronology for glacial events based on previously published and some new radiocarbon dates on marine molluscs and foraminifera. From these data it is suggested that after the central Witch Ground Basin was deglaciated at c. 27 cal. ka BP, the eastern part was inundated by glacial ice from the east in the Tampen advance at c. 21 cal. ka BP. Subsequently, the basin was inundated by ice from northeast during the Fladen 1 (c. 17.5 cal. ka BP) and the Fladen 2 (16.2 cal. ka BP) events. It should be emphasized that the Fladen 1 and 2 events, individually, may represent dynamics of relatively small lobes of glacial ice at the margin of the British Ice Sheet and that the climatic significance of these may be questioned. However, the Fladen Events probably correlate in time with the Clogher Head and Killard Point re-advances previously documented from Ireland and the Bremanger event from off western Norway, suggesting that the British and Fennoscandian ice sheets both had major advances in their northwestern parts, close to the northwestern European seaboard, at this time.

Description: The Eastern Tropical South Pacific oxygen minimum zone (ETSP-OMZ) is a site of intense nitrous oxide (N2O) flux to the atmosphere. This flux results from production of N2O by nitrification and denitrification, but the contribution of the two processes is unknown. The rates of these pathways and their distributions were measured directly using 15N tracers. The highest N2O production rates occurred at the depth of peak N2O concentrations at the oxic-anoxic interface above the oxygen deficient zone (ODZ) because slightly oxygenated waters allowed (1) N2O production from both nitrification and denitrification and (2) higher nitrous oxide production yields from nitrification. Within the ODZ proper (i.e., anoxia), the only source of N2O was denitrification (i.e., nitrite and nitrate reduction), the rates of which were reflected in the abundance of nirS genes (encoding nitrite reductase). Overall, denitrification was the dominant pathway contributing the N2O production in the ETSP-OMZ.

Description: Performance of several library search algorithms (against EI mass spectral databases) implemented in commercial software products ( acd/specdb, chemstation, gc/ms solution and ms search) was estimated. Test set contained 1000 mass spectra, which were randomly selected from NIST'08 (RepLib) mass spectral database. It was shown that composite (also known as identity) algorithm implemented in ms search (NIST) software gives statistically the best results: the correct compound occupied the first position in the list of possible candidates in 81% of cases; the correct compound was within the list of top ten candidates in 98% of cases. It was found that use of presearch option can lead to rejection of the correct answer from the list of possible candidates (therefore presearch option should not be used, if possible). Overall performance of library search algorithms was estimated using receiver operating characteristic curves.

Description: Twenty-four strains of marine Roseobacter clade bacteria were isolated from macroalgae and investigated for the production of quorum-sensing autoinducers, N-acylhomoserine lactones (AHLs). GC/MS analysis of the extracellular metabolites allowed us to evaluate the release of other small molecules as well. Nineteen strains produced AHLs, ranging from 3-OH-C10:0-HSL (homoserine lactone) to (2E,11Z)-C18:2-HSL, but no specific phylogenetic or ecological pattern of individual AHL occurrence was observed when cluster analysis was performed. Other identified compounds included indole, tropone, methyl esters of oligomers of 3-hydroxybutyric acid, and various amides, such as N-9-hexadecenoylalanine methyl ester (9-C16:1-NAME), a structural analogue of AHLs. Several compounds were tested for their antibacterial and antialgal activity on marine isolates likely to occur in the habitat of the macroalgae. Both AHLs and 9-C16:1-NAME showed high antialgal activity against Skeletonema costatum, whereas their antibacterial activity was low.

Description: Fucoidan, a natural component of seaweeds, is reported to have immunomodulatory and anti-tumor effects. The mechanisms underpinning these activities remain poorly understood. In this study, the cytotoxicity and anti-tumor activities of fucoidan were investigated in acute myeloid leukemia (AML) cells. The human AML cell lines NB4, KG1a, HL60, and K562 were treated with fucoidan and cell cycle, cell proliferation, and expression of apoptotic pathways molecules were analyzed. Fucoidan suppressed the proliferation and induced apoptosis through the intrinsic and extrinsic pathways in the acute promyelocytic leukemia (APL) cell lines NB4 and HL60, but not in KG1a and K562 cells. In NB4 cells, apoptosis was caspase-dependent as it was significantly attenuated by pre-treatment with a pan-caspase inhibitor. P21/WAF1/CIP1 was significantly up-regulated leading to cell cycle arrest. Fucoidan decreased the activation of ERK1/2 and down-regulated the activation of AKT through hypo-phosphorylation of Thr(308) residue but not Ser(473). In vivo, a xenograft model using the NB4 cells was employed. Mice were fed with fucoidan and tumor growth was measured following inoculation with NB4 cells. Subsequently, splenic natural killer (NK) cell cytotoxic activity was also examined. Oral doses of fucoidan significantly delayed tumor growth in the xenograft model and increased cytolytic activity of NK cells. Taken together, these data suggest that the selective inhibitory effect of fucoidan on APL cells and its protective effect against APL development in mice warrant further investigation of fucoidan as a useful agent in treatment of certain types of leukemia.

Description: Intercellular adhesion molecule-1 (ICAM-1) is distributed and expressed on cell surface and is present in circulation as soluble form (sICAM-1). Tumor necrosis factor-alpha (TNFα) and radical oxygen species (ROS) up-regulate the expression of ICAM-1. This study demonstrates for the first time in 18 Co cells, a myofibroblast cell line derived from human colonic mucosa, an up-regulation of ICAM-1 expression and sICAM-1 release induced by oxidative stress and TNFα stimulation. The intracellular redox state was modulated by L-buthionine-S,R-sulfoximine (BSO) or N-acetylcysteine (NAC), inhibitor and precursor respectively of GSH synthesis. ROS production increases in cells treated with BSO or TNFα, and this has been related to an up-regulation of ICAM-1 expression and sICAM-1 release. The involvement of metalloproteinases in ICAM-1 release has been demonstrated. Moreover, also expression and activation of A disintegrin and metalloproteinase 17, a membrane-bound enzyme known as TNFα-converting enzyme (TACE), have been related to ROS levels. This suggests the possible involvement of TACE in the cleavage of ICAM-1 on cell surface in condition of oxidative stress. NAC down-regulates the expression and release of ICAM-1 as well as the expression and activation of TACE. However, in TNFα stimulated cells NAC treatment reduces only in part ICAM-1 expression and sICAM-1 release. Given this TNFα may also act on these events by a redox-independent mechanism.

Description: The diversity of stony corals displays one of the most exemplary latitudinal gradients on the planet, yet the evolutionary dynamics that produced this pattern remains unclear. Using both paleontological and distributional data, we compare the origination, extinction and immigration levels between low and high latitudes since the earliest proliferation of the group during the mid‐Triassic. Altogether, first and last occurrence localities in the fossil record do not support a positive preference towards either latitudinal bin. Nonetheless, considering past and present scleractinian fauna, the process of extinction has been apparently more pronounced at higher latitudes based on face values and correlation coefficients. Far above these differences, immigration of extant taxa has been substantially higher towards the tropics than to temperate regions. While the net dispersal toward low latitudes persists in all temporal intervals, the gradient of diversity was largely built up during the Cenozoic Era and only becomes significantly steep from the Neogene Period onwards. This dynamic supports the ‘into the tropical museum’ model, which suggests that tropics have historically acted as a center of accumulation for marine biodiversity.

Description: This study investigated the effects of diet supplementation with poly-β-hydroxybutyrate (PHB) on growth performance, digestive enzyme activity, lipid metabolism, mineral uptake and bacterial challenge of the rainbow trout fry (initial weight: 111.3 ± 13.7 mg) during a 6-week experimental period. In the experimental set-up, the commercial diet of rainbow trout fry was replaced with 0.5%, 1% and 2% PHB. The results of our work showed that the replacing of diets with PHB in experimental treatments decreases the weight of rainbow trout fry during the first 2 weeks before significantly increasing final weight at the end of the 6-week period. PHB also improved digestive enzyme activity in experimental treatments. The highest total protease, pepsin activity and pancreatic enzyme secretion were observed with the 0.5% PHB treatment. A higher concentration of Na and K was observed in the whole body of the fry fed on 1% and 2% PHB-supplemented diets. Enhanced survival rates occurred in all groups of fry after bath exposure to Yersinia ruckeri compared to rates in those fed the control diet. Our results suggest that the diet supplemented with PHB may improve growth performance, digestive enzyme activity and the functioning of the immune system. These positive effects could be considered for new applications in aquaculture.

Description: Glycogen synthase kinase 3 (GSK-3) was first discovered in 1980 as one of the key enzymes of glycogen metabolism. Since then, GSK-3 has been revealed as one of the master regulators of a diverse range of signaling pathways, including those activated by Wnts, participating in the regulation of numerous cellular functions, suggesting that its activity is tightly regulated. Numerous studies have pointed to an association of GSK-3 dysregulation with the onset and progression of human diseases, including diabetes mellitus, obesity, inflammation, neurological illnesses, and cancer. Therefore, GSK-3 is recognized as an attractive therapeutic target in multiple disorders. However, the great number of substrates that are phosphorylated by GSK-3 has raised the question of whether this limits its feasibility as a therapeutic target because of the potential disruption of many cellular processes and also by the fear that inhibition of GSK-3 may stimulate or aid in malignant transformation, as GSK-3 can phosphorylate pro-oncogenic factors. This mini review focuses on the role played by GSK-3 in Wnt signaling pathway and cancer using as model colon cancer.

Description: Low seawater pH can be harmful to many calcifying marine organisms, but the calcifying macroalgae Padina spp. flourish at natural submarine carbon dioxide seeps where seawater pH is low. We show that the microenvironment created by the rolled thallus margin of Padina australis facilitates supersaturation of CaCO3 and calcifi-cation via photosynthesis-induced elevated pH. Using microsensors to investigate oxygen and pH dynamics in the microenvironment of P. australis at a shallow CO2 seep, we found that, under saturating light, the pH inside the microenvironment (pHME) was higher than the external seawater (pHSW) at all pHSW levels investigated, and the difference (i.e., pHME − pHSW) increased with decreasing pHSW (0.9 units at pHSW 7.0). Gross photosynthesis (Pg) inside the microenvironment increased with decreasing pHSW, but algae from the control site reached a threshold at pH 6.5. Seep algae showed no pH threshold with respect to Pg within the pHSW range investigated. The external carbonic anhydrase (CA) inhibitor, acetazolamide, strongly inhibited Pg of P. australis at pHSW 8.2, but the effect was diminished under low pHSW (6.4–7.5), suggesting a greater dependence on membrane-bound CA for the dehydration of HCO3− ions during dissolved inorganic carbon uptake at the higher pHSW. In comparison, a calcifying green alga, Halimeda cuneata f. digitata, was not inhibited by AZ, suggesting efficient bicarbonate transport. The ability of P. australis to elevate pHME at the site of calcification and its strong dependence on CA may explain why it can thrive at low pHSW.

Description: Natural CO2 venting systems can mimic conditions that resemble intermediate to high pCO2 levels as predicted for our future oceans. They represent ideal sites to investigate potential long-term effects of ocean acidification on marine life. To test whether microbes are affected by prolonged exposure to pCO2 levels, we examined the composition and diversity of microbial communities in oxic sandy sediments along a natural CO2 gradient. Increasing pCO2 was accompanied by higher bacterial richness and by a strong increase in rare members in both bacterial and archaeal communities. Microbial communities from sites with CO2 concentrations close to today's conditions had different structures than those of sites with elevated CO2 levels. We also observed increasing sequence abundance of several organic matter degrading types of Flavobacteriaceae and Rhodobacteraceae, which paralleled concurrent shifts in benthic cover and enhanced primary productivity. With increasing pCO2, sequences related to bacterial nitrifying organisms such as Nitrosococcus and Nitrospirales decreased, and sequences affiliated to the archaeal ammonia-oxidizing Thaumarchaeota Nitrosopumilus maritimus increased. Our study suggests that microbial community structure and diversity, and likely key ecosystem functions, may be altered in coastal sediments by long-term CO2 exposure to levels predicted for the end of the century.

Description: By molecular analysis of a high number of gammarids, including 29 out-group genera, we could assure the monophyly of Gammaridae. To avoid the paraphyly of the family, we propose the omission of Pontogammaridae, Typhlogammaridae, and all Baikalian families. Similarly, the genera Fontogammarus, Sinogammarus, Lagunogammarus, Pephredo, Neogammarus, and Laurogammarus may be cancelled. But, tens of Baikal genera, nested within Gammarus, are so diverse that they must be retained, although rendering Gammarus paraphyletic. Besides we propose the polyphyletic Echinogammarus–Chaetogammarus group to be divided into monophyletic genera Echinogammarus s. str., Homoeogammarus, Parhomoeogammarus, Marinogammarus, Relictogammarus gen. nov., Chaetogammarus, and Trichogammarus gen. nov. These solutions made it possible to complete the first analysis of the family evolution in light of its phylogeny. Perimarine clades are mainly basally split clades, whereas in some ancient lakes extremely rich endemic faunas had developed polyphyletically. The troglobiotic Typhlogammarus group from Dinarides and Caucasus formed a monophylum, whereas the troglobiotic assemblage of Gammarus species is highly polyphyletic. Reduction of the uropod III endopodite, which classically distinguishes between the genera Gammarus and Echinogammarus, appeared to be highly polyphyletic. Protective dorsal pleonal projections occur scattered across the family and beyond, whereas lateral projections were limited to species of ancient lakes, so both structures were polyphyletic. The evolutionary history of Gammaridae was investigated with ten different calibration schemes, which produced incompatible results; however, the most probable scenario is a late rise of the family, which can only explain the absence of Gammaridae species around the Indo-Pacific.

Description: The Ionian and Gavrovo Zones in the external Hellenide fold-and-thrust belt of western Greece are a southern extension of the proven Albanian oil and gas province. Two petroleum systems have been identified here: a Mesozoic mainly oil-prone system, and a Cenozoic system with gas potential. Potential Mesozoic source rocks include organic-rich shales within Triassic evaporites and dissolution-collapse breccias; marls at the base of the Early Jurassic (lower Toarcian) Ammonitico Rosso; the Lower and Upper Posidonia beds (Toarcian–Aalenian and Callovian–Tithonian respectively); and the Late Cretaceous (Cenomanian–Turonian) Vigla Shales, part of the Vigla Limestone Formation. These potential source rocks contain Types I-II kerogen and are mature for oil generation if sufficiently deeply buried. The Vigla Shales have TOC up to 2.5% and good to excellent hydrocarbon generation potential with kerogen Type II. Potential Cenozoic gas-prone source rocks with Type III kerogen comprise organic-rich intervals in Eocene–Oligocene and Aquitanian–Burdigalian submarine fan deposits, which may generate biogenic gas. The complex regional deformation history of the external Hellenide foldbelt, with periods of both crustal extension and shortening, has resulted in the development of structural traps. Mesozoic extensional structures have been overprinted by later Hellenide thrusts, and favourable trap locations may occur along thrust back-limbs and in the crests of anticlines. Trapping geometries may also be provided by lateral discontinuities in the basal detachment in the thin-skinned fold-and-thrust belt, or associated with strike-slip fault zones. Regional-scale seals are provided by Triassic evaporites, and Eocene-Oligocene and Neogene shales. Onshore oil- and gasfields in Albania are located in the Peri-Adriatic Depression and Ionian Zone. Numerous oil seeps have been recorded in the Kruja Zone but no commercial hydrocarbon accumulations. Source rocks in the Ionian Zone comprise Upper Triassic – Lower Jurassic carbonates and shales of Middle Jurassic, Late Jurassic and Early Cretaceous ages. Reservoir rocks in both oil- and gas-fields in general consist of silicilastics in the Peri-Adriatic Depression succession and the underlying Cretaceous–Eocene carbonates with minimal primary porosity improved by fracturing in the Albanian Ionian Zone. Oil accumulations in thrust-related structures are sealed by the overlying Oligocene flysch whereas seals for gas accumulations are provided by Upper Miocene–Pliocene shales. Thin-kinned thrusting along flysch décollements, resulting in stacked carbonate sequences, has clearly been demonstrated on seismic profiles and in well data, possibly enhanced by evaporitic horizons. Offshore Albania in the South Adriatic basin, exploration targets in the SW include possible compressional structures and topographic highs proximal to the relatively unstructured boundary of the Apulian platform. Further to the north, there is potential for oil accumulations both in the overpressured siliciclastic section and in the underlying deeply buried platform carbonates. Biogenic gas potential is related to structures in the overpressured Neogene (Miocene–Pliocene) succession.

Description: This paper reports a physicochemical study (thermodynamic and kinetic data) describing the ability of Rubus ulmifolius biomass (dead leaves) for metal uptake. The toxicity of aluminum is a major problem for crops in acidic soils and therefore, aluminum has been selected. The results obtained indicate that dead R. ulmifolius leaves uptake up to 10000mg/kg on its surface in less than 60min. This suggests that R. ulmifolius can be an excellent component with adsorbent properties for aquatic environments and in particular for amendments to be used in acidic soils in order to control aluminum levels, thus its toxicity. The results obtained have been critically analyzed and compared with literature on aluminum bioaccumulation. The application of a pseudo-second order kinetic equation, not previously used in toxicity studies, is discussed. Moreover, a good linear correlation between stability constants for Al3+ complexes with several defined ligands and the Langmuir affinity constants obtained from the corresponding adsorption isotherm has been found. Therefore, in addition to its ethno-botanical relevance, applications of R. ulmifolius as a detoxifier for aluminum in a simulated acidic gastrointestinal fluid, as phytostabilization agent in amendments or in natural attenuation cycles or as biomass for wastewater treatment containing aluminum, are suggested.

Description: 1) With ambitious renewable energy targets, pile driving associated with offshore wind farm construction will become widespread in the marine environment. Many proposed wind farms overlap with the distribution of seals, and sound from pile driving has the potential to cause auditory damage. 2) We report on a behavioural study during the construction of a wind farm using data from GPS/GSM tags on 24 harbour seals Phoca vitulina L. Pile driving data and acoustic propagation models, together with seal movement and dive data, allowed the prediction of auditory damage in each seal. 3) Growth and recovery functions for auditory damage were combined to predict temporary auditory threshold shifts in each seal. Further, M-weighted cumulative sound exposure levels [cSELs(Mpw)] were calculated and compared to permanent auditory threshold shift exposure criteria for pinnipeds in water exposed to pulsed sounds. 4) The closest distance of each seal to pile driving varied from 4·7 to 40·5 km, and predicted maximum cSELs(Mpw) ranged from 170·7 to 195·3 dB re 1μPa2-s for individual seals. Comparison to exposure criteria suggests that half of the seals exceeded estimated permanent auditory damage thresholds. 5) Prediction of auditory damage in marine mammals is a rapidly evolving field and has a number of key uncertainties associated with it. These include how sound propagates in shallow water environments and the effects of pulsed sounds on seal hearing; as such, our predictions should be viewed in this context. 6) Policy implications. We predicted that half of the tagged seals received sound levels from pile driving that exceeded auditory damage thresholds for pinnipeds. These results have implications for offshore industry and will be important for policymakers developing guidance for pile driving. Developing engineering solutions to reduce sound levels at source or methods to deter animals from damage risk zones, or changing temporal patterns of piling could potentially reduce auditory damage risk. Future work should focus on validating these predictions by collecting auditory threshold information pre- and post-exposure to pile driving. Ultimately, information on population-level impacts of exposure to pile driving is required to ensure that offshore industry is developed in an environmentally sustainable manner.

Description: An integral concept of ecological research is the constraint of biodiversity along latitudinal and environmental gradients. The Red Sea features a natural example of a latitudinal gradient of salinity, temperature and nutrient richness. Coral reefs along the Red Sea coasts are supported with allochthonous resources such as oceanic and neritic phytoplankton and zooplankton; however, relatively little is known about how the ecohydrography correlates with plankton biodiversity and abundance. In this article we present the biodiversity of phytoplankton and zooplankton in Red Sea coral reefs. Oceanographic data (temperature, salinity), water samples for nutrient analysis, particulate organic matter, phytoplankton and zooplankton, the latter with special reference to Copepoda (Crustacea), were collected at nine coral reefs over ~1500 km distance along the Red Sea coast of Saudi Arabia. The trophic state of ambient waters [as indicated by chlorophyll a (Chl a)] changed from strong oligotrophy in the north to mesotrophy in the south and was associated with increasing biomasses of Bacillariophyceae, picoeukaryotes and Synechococcus as indicated by pigment fingerprinting (CHEMTAX) and flow cytometry. Net-phytoplankton microscopy revealed a Trichodesmium erythraeum (Cyanobacteria) bloom north of the Farasan Islands. Several potentially harmful algae, including Dinophysis miles and Gonyaulax spinifera (Dinophyceae), were encountered in larger numbers in the vicinity of the aquaculture facilities at Al Lith. Changes in zooplankton abundance were mainly correlated to the phytoplankton biomass following the latitudinal gradient. The largest zooplankton abundance was observed at the Farasan Archipelago, despite high abundances of copepodites, veligers (Gastropoda larvae) and Chaetognatha at Al Lith. Although the community composition changed over latitude, biodiversity indices of phytoplankton and zooplankton did not exhibit a systematic pattern. As this study constitutes the first current account of the plankton biodiversity in Red Sea coral reefs at a large spatial scale, the results will be informative for ecosystem-based management along the coastline of Saudi Arabia.

Description: VALUE is an open European network to validate and compare downscaling methods for climate change research. VALUE aims to foster collaboration and knowledge exchange between climatologists, impact modellers, statisticians, and stakeholders to establish an interdisciplinary downscaling community. A key deliverable of VALUE is the development of a systematic validation framework to enable the assessment and comparison of both dynamical and statistical downscaling methods. In this paper, we present the key ingredients of this framework. VALUE's main approach to validation is user- focused: starting from a specific user problem, a validation tree guides the selection of relevant validation indices and performance measures. Several experiments have been designed to isolate specific points in the downscaling procedure where problems may occur: what is the isolated downscaling skill? How do statistical and dynamical methods compare? How do methods perform at different spatial scales? Do methods fail in representing regional climate change? How is the overall representation of regional climate, including errors inherited from global climate models? The framework will be the basis for a comprehensive community-open downscaling intercomparison study, but is intended also to provide general guidance for other validation studies.

Description: IODP Expedition 340 successfully drilled a series of sites offshore Montserrat, Martinique and Dominica in the Lesser Antilles from March to April 2012. These are among the few drill sites gathered around volcanic islands, and the first scientific drilling of large and likely tsunamigenic volcanic island-arc landslide deposits. These cores provide evidence and tests of previous hypotheses for the composition and origin of those deposits. Sites U1394, U1399, and U1400 that penetrated landslide deposits recovered exclusively seafloor-sediment, comprising mainly turbidites and hemipelagic deposits, and lacked debris avalanche deposits. This supports the concepts that i/ volcanic debris avalanches tend to stop at the slope break, and ii/ widespread and voluminous failures of pre-existing low-gradient seafloor sediment can be triggered by initial emplacement of material from the volcano. Offshore Martinique (U1399 and 1400), the landslide deposits comprised blocks of parallel strata that were tilted or micro-faulted, sometimes separated by intervals of homogenized sediment (intense shearing), while Site U1394 offshore Montserrat penetrated a flat-lying block of intact strata. The most likely mechanism for generating these large-scale seafloor-sediment failures appears to be propagation of a decollement from proximal areas loaded and incised by a volcanic debris avalanche. These results have implications for the magnitude of tsunami generation. Under some conditions, volcanic island landslide deposits comprised of mainly seafloor sediment will tend to form smaller magnitude tsunamis than equivalent volumes of subaerial block-rich mass flows rapidly entering water. Expedition 340 also successfully drilled sites to access the undisturbed record of eruption fallout layers intercalated with marine sediment which provide an outstanding high-resolution dataset to analyze eruption and landslides cycles, improve understanding of magmatic evolution as well as offshore sedimentation processes. This article is protected by copyright. All rights reserved.

Description: The iron hypothesis suggests that in large areas of the ocean phytoplankton growth and thus photosynthetic CO2-uptake is limited by the micronutrient iron. Phytoplankton requires iron in particular for nitrate uptake, light harvesting and electron transport in photosynthesis, suggesting a tight coupling of iron and light limitation. One important source of iron to the open ocean is dust deposition. Previous global biogeochemical modeling studies have suggested a low sensitivity of oceanic CO2-uptake to changes in dust deposition. Here we show that this sensitivity is increased significantly when iron-light colimitation, i.e. the impact of iron bioavailability on light harvesting capabilities, is explicitly considered. Accounting for iron-light colimitation increases the shift of export production from tropical and subtropical regions to the higher latitudes of subpolar regions at high dust deposition and amplifies iron limitation at low dust deposition. Our results re-emphasize the role of iron as a key limiting nutrient for phytoplankton.

Description: On average, 10.52% of the total population was found to fish for recreation across the industrialised world (N = 27 countries), amounting to an estimated 118 million (95% confidence interval 81–154 million) people in North America, Europe and Oceania. Participation rates declined with population density and gross domestic product, indicating a negative effect of urbanisation and post-modernisation on fishing interest. Participation rates also declined with increasing median age, average household size and unemployment rate, suggesting resource limitation to constrain participation in fishing. By contrast, two indicators of the cultural importance of fish (fish landings and per capita fish consumption) and an indicator of perceived need for leisure (weekly working hours) were positively correlated with fishing participation. Based on these findings, which explained 60% of the variance in fishing participation across the industrialised world, reduced fishing interest is to be expected with post-industrialisation. Dedicated management and marketing intervention is needed to reverse the track of diminishing fishing interest in industrialised countries.

Description: A long-standing problem in climate modeling is the inaccurate simulation of tropical Atlantic (TA) sea surface temperature (SST), known as the TA SST bias. It has far-reaching consequences for climate prediction in that area as it goes along, among others, with erroneous precipitation patterns. We show that the TA SST bias can be largely reduced by increasing both the atmospheric horizontal and vertical resolution in a climate model. At high horizontal resolution, enhanced vertical resolution is indispensable to substantially improve the simulation of TA SST by enhancing surface wind stress. This also reduces biases in the upper ocean thermal structure and precipitation patterns. Although, enhanced horizontal resolution alone leads to some improvement in the mean climate, typical bias patterns characterized by a reversed zonal SST gradient at the equator and too warm SST in the Benguela upwelling region are mostly unchanged at a coarser vertical resolution.

Description: Seagrass meadows are a crucial component of tropical marine reef ecosystems. Seagrass plants are colonized by a multitude of epiphytic organisms that contribute to broadening the ecological role of seagrasses. To better understand how environmental changes like ocean acidification might affect epiphytic assemblages, the microbial community composition of the epiphytic biofilm of Enhalus acroides was investigated at a natural CO2 vent in Papua New Guinea using molecular fingerprinting and next generation sequencing of 16S and 18S rRNA genes. Both bacterial and eukaryotic epiphytes formed distinct communities at the CO2-impacted site compared to the control site. This site-related CO2 effect was also visible in the succession pattern of microbial epiphytes. We further found an increased abundance of bacterial types associated with coral diseases at the CO2-impacted site (Fusobacteria, Thalassomonas) whereas eukaryotes such as certain crustose coralline algae commonly related to healthy reefs were less diverse. These trends in the epiphytic community of E. acroides suggest a potential role of seagrasses as vectors of coral pathogens and may support previous predictions of a decrease in reef health and prevalence of diseases under future ocean acidification scenarios.

Description: The Late Quaternary variability of the South Asian (or Indian) monsoon has been linked with glacial-interglacial and millennial scale climatic changes but past rainfall intensity in the river catchments draining into the Andaman Sea remains poorly constrained. Here we use radiogenic Sr, Nd, and Pb isotope compositions of the detrital clay-size fraction and clay mineral assemblages obtained from sediment core NGHP Site 17 in the Andaman Sea to reconstruct the variability of the South Asian monsoon during the past 60 kyr. Over this time interval eNd values changed little, generally oscillating between 27.3 and 25.3 and the Pb isotope signatures are essentially invariable, which is in contrast to a record located further northeast in the Andaman Sea. This indicates that the source of the detrital clays did not change significantly during the last glacial and deglaciation suggesting the monsoon was spatially stable. The most likely source region is the Irrawaddy river catchment including the Indo-Burman Ranges with a possible minor contribution from the Andaman Islands. High smectite/(illite1chlorite) ratios (up to 14), as well as low 87Sr/86Sr ratios (0.711) for the Holocene period indicate enhanced chemical weathering and a stronger South Asian monsoon compared to marine oxygen isotope stages 2 and 3. Short, smectite-poor intervals exhibit markedly radiogenic Sr isotope compositions and document weakening of the South Asian monsoon, which may have been linked to short-term northern Atlantic climate variability on millennial time scales.

Description: Denmark Strait Overflow Water (DSOW) supplies the densest contribution to North Atlantic Deep Water and is monitored at several locations in the subpolar North Atlantic. Hydrographic (temperature and salinity) and velocity time series from three multiple-mooring arrays at the Denmark Strait sill, at 180 km downstream (south of Dohrn Bank) and at a further 320 km downstream on the east Greenland continental slope near Tasiilaq (formerly Angmagssalik), were analyzed to quantify the variability and track anomalies in DSOW in the period 2007-2012. No long-term trends were detected in the time series, while variability on time scales from interannual to weekly was present at all moorings. The hydrographic time series from different moorings within each mooring array showed coherent signals, while the velocity fluctuations were only weakly correlated. Lagged correlations of anomalies between the arrays revealed a propagation from the sill of Denmark Strait to the Angmagssalik array in potential temperature with an average propagation time of 13 days, while the correlations in salinity were low. Entrainment of warm and saline Atlantic Water and fresher water from the East Greenland Current (via the East Greenland Spill Jet) can explain the whole range of hydrographic changes in the DSOW measured downstream of the sill. Changes in the entrained water masses and in the mixing ratio can thus strongly influence the salinity variability of DSOW. Fresh anomalies found in downstream measurements of DSOW within the Deep Western Boundary Current can therefore not be attributed to Arctic climate variability in a straightforward way

Description: An empirical function is derived for predicting the rate-depth profile of particulate organic carbon (POC) degradation in surface marine sediments including the bioturbated layer. The rate takes the form of a power law analogous to the Middelburg function. The functional parameters were optimized by simulating measured benthic O2 and NO3− fluxes at 185 stations worldwide using a diagenetic model. The novelty of this work rests with the finding that the vertically-resolved POC degradation rate in the bioturbated zone can be determined using a simple function where the POC rain rate is the governing variable. Although imperfect, the model is able to fit 71 % of paired O2 and NO3− fluxes to within 50% of measured values. It further provides realistic geochemical concentration-depth profiles, NO3− penetration depths and apparent first-order POC mineralization rate constants. The model performs less well on the continental shelf due to the high heterogeneity there. When applied to globally resolved maps of rain rate, the model predicts a global denitrification rate of 182 ± 88 Tg yr−1 of N and a POC burial rate of 107 ± 52 Tg yr−1 of C with a mean carbon burial efficiency of 6.1%. These results are in very good agreement with published values. Our proposed function is conceptually simple, requires less parameterization than multi-G type models and is suitable for non-steady state applications. It provides a basis for more accurately simulating benthic nutrient fluxes and carbonate dissolution rates in Earth system models.

Description: We present measurements of pCO2, O2 concentration, biological oxygen saturation (ΔO2/Ar), and N2 saturation (ΔN2) in Southern Ocean surface waters during austral summer, 2010–2011. Phytoplankton biomass varied strongly across distinct hydrographic zones, with high chlorophyll a (Chl a) concentrations in regions of frontal mixing and sea ice melt. pCO2 and ΔO2/Ar exhibited large spatial gradients (range 90 to 450 µatm and −10 to 60%, respectively) and covaried strongly with Chl a. However, the ratio of biological O2 accumulation to dissolved inorganic carbon (DIC) drawdown was significantly lower than expected from photosynthetic stoichiometry, reflecting the differential time scales of O2 and CO2 air-sea equilibration. We measured significant oceanic CO2 uptake, with a mean air-sea flux (~ −10 mmol m−2 d−1) that significantly exceeded regional climatological values. N2 was mostly supersaturated in surface waters (mean ΔN2 of +2.5%), while physical processes resulted in both supersaturation and undersaturation of mixed layer O2 (mean ΔO2phys = 2.1%). Box model calculations were able to reproduce much of the spatial variability of ΔN2 and ΔO2phys along the cruise track, demonstrating significant effects of air-sea exchange processes (e.g., atmospheric pressure changes and bubble injection) and mixed layer entrainment on surface gas disequilibria. Net community production (NCP) derived from entrainment-corrected surface ΔO2/Ar data, ranged from ~ −40 to 〉 300 mmol O2 m−2 d−1 and showed good coherence with independent NCP estimates based on seasonal mixed layer DIC deficits. Elevated NCP was observed in hydrographic frontal zones and stratified regions of sea ice melt, reflecting physical controls on surface water light fields and nutrient availability.

Description: Siberian river water is a first-order contribution to the Arctic freshwater budget, with the Ob, Yenisey, and Lena supplying nearly half of the total surface freshwater flux. However, few details are known regarding where, when, and how the freshwater transverses the vast Siberian shelf seas. This paper investigates the mechanism, variability, and pathways of the fresh Kara Sea outflow through Vilkitsky Strait toward the Laptev Sea. We utilize a high-resolution ocean model and recent shipboard observations to characterize the freshwater-laden Vilkitsky Strait Current (VSC), and shed new light on the little-studied region between the Kara and Laptev Seas, characterized by harsh ice conditions, contrasting water masses, straits, and a large submarine canyon. The VSC is 10-20 km wide, surface intensified, and varies seasonally (maximum from August to March) and interannually. Average freshwater (volume) transport is 500 ± 120 km3 a-1 (0.53 ± 0.08 Sv), with a baroclinic flow contribution of 50-90%. Interannual transport variability is explained by a storage-release mechanism, where blocking-favorable summer winds hamper the outflow and cause accumulation of freshwater in the Kara Sea. The year following a blocking event is characterized by enhanced transports driven by a baroclinic flow along the coast that is set up by increased freshwater volumes. Eventually, the VSC merges with a slope current and provides a major pathway for Eurasian river water toward the western Arctic along the Eurasian continental slope. Kara (and Laptev) Sea freshwater transport is not correlated with the Arctic Oscillation, but rather driven by regional summer pressure patterns.

Description: Widespread seepage of methane from seafloor sediments offshore Svalbard close to the landward limit of the gas hydrate stability zone (GHSZ) may, in part, be driven by hydrate destabilization due to bottom water warming. To assess whether this methane reaches the atmosphere where it may contribute to further warming, we have undertaken comprehensive surveys of methane in seawater and air on the upper slope and shelf region. Near the GHSZ limit at ∼400 m water depth, methane concentrations are highest close to the seabed, reaching 825 nM. A simple box model of dissolved methane removal from bottom waters by horizontal and vertical mixing and microbially mediated oxidation indicates that ∼60% of methane released at the seafloor is oxidized at depth before it mixes with overlying surface waters. Deep waters are therefore not a significant source of methane to intermediate and surface waters; rather, relatively high methane concentrations in these waters (up to 50 nM) are attributed to isopycnal turbulent mixing with shelf waters. On the shelf, extensive seafloor seepage at 〈100 m water depth produces methane concentrations of up to 615 nM. The diffusive flux of methane from sea to air in the vicinity of the landward limit of the GHSZ is ∼4-20 μmol m-2 d-1, which is small relative to other Arctic sources. In support of this, analyses of mole fractions and the carbon isotope signature of atmospheric methane above the seeps do not indicate a significant local contribution from the seafloor source.

Description: We performed simulations with a global model of ocean biogeochemistry forced with orbitally driven anomalies of oceanic conditions for the mid-Holocene, known as Holocene climate optimum, to investigate natural variability in the eastern equatorial Pacific oxygen minimum zone (EEP OMZ). While the global mean temperature during the mid-Holocene was likely slightly higher than the 1961–1990 mean, the sea surface temperature in the EEP was slightly lower. Mid-Holocene oxygen concentrations in the EEP OMZ are generally increased, locally by up to 50%, and the EEP OMZ volume was, depending on definition of the OMZ threshold, at least 6% lower. These higher oxygen levels are the combined result of competing physical and biogeochemical processes. Our results imply that mechanisms for past changes in the EEP OMZ intensity and extension can differ from the global warming driven decline in oxygen levels observed for the recent decades and predicted for the future.

Description: Foulden Maar is a highly resolved maar lake deposit from the South Island of New Zealand comprising laminated diatomite punctuated by numerous diatomaceous turbidites. Basaltic clasts found in debris flow deposits near the base of the cored sedimentary sequence yielded two new ⁴⁰Ar/³⁹Ar dates of 24.51 ± 0.24 and 23.38 ± 0.24 Ma (2σ). The younger date agrees within error with a previously published ⁴⁰Ar/³⁹Ar date of 23.17 ± 0.19 Ma from a basaltic dyke adjacent to the maar crater. The diatomite is inferred to have been deposited over several tens of thousands of years in the latest Oligocene/earliest Miocene, and may have been coeval with the period of rapid glaciation and subsequent deglaciation of Antarctica known as the Mi-1 event. Sediment magnetic properties and SEM measurements indicate that the magnetic signal is dominated by pseudo-single domain pyrrhotite. The most likely source of detrital pyrrhotite is schist country rock fragments from the inferred tephra ring created by the phreatomagmatic eruption that formed the maar. Variations in magnetic mineral concentration indicate a decrease in erosional input throughout the depositional period, suggesting long-term (tens of thousands of years) environmental change in New Zealand in the latest Oligocene/earliest Miocene.

Description: Lanthipeptides are ribosomally synthesized and post-translationally modified microbial secondary metabolites. Here, we report the identification and isolation of streptocollin from Streptomyces collinus Tü 365, a new member of class IV lanthipeptides. Insertion of the constitutive ermE* promoter upstream of the lanthipeptide synthetase gene stcL resulted in peptide production. The streptocollin gene cluster was heterologously expressed in S. coelicolor M1146 and M1152 with 3.5- and 5.5-fold increased yields, respectively. The structure and ring topology of streptocollin were determined by high resolution MS/MS analysis. Streptocollin contains four macrocyclic rings, with one lanthionine and three methyllanthionine residues. To the best of our knowledge, this is the first report on the isolation of a class IV lanthipeptide in preparative amounts, and on the successful heterologous expression of a class IV lanthipeptide gene cluster.

Description: A precise age for the collision of the Kohistan-Ladakh block with Eurasia along the Shyok suture zone (SSZ) is one key to understanding the accretionary history of Tibet and the tectonics of Eurasia during the India-Eurasia collision. Knowing the age of the SSZ also allows the suture to be used as a piercing line for calculating total offset along the Karakoram Fault, which effectively represents the SE border of the Tibetan Plateau and has played a major role in plateau evolution. We present a combined structural, geochemical, and geochronologic study of the SSZ as it is exposed in the Nubra region of India to test two competing hypotheses: that the SSZ is of Late Cretaceous or, alternatively, of Eocene age. Coarse-continental strata of the Saltoro Molasse, mapped in this area, contain detrital zircon populations suggestive of derivation from Eurasia despite the fact that the molasse itself is deposited unconformably onto Kohistan-Ladakh rocks, indicating that the molasse is postcollisional. The youngest population of detrital zircons in these rocks (approximately 92 Ma) and a U/Pb zircon date for a dike that cuts basal molasse outcrops (approximately 85 Ma) imply that deposition of the succession began in the Late Cretaceous. This establishes a minimum age for the SSZ and rules out the possibility of an Eocene collision between Kohistan-Ladakh and Eurasia. Our results support correlation of the SSZ with the Bangong suture zone in Tibet, which implies a total offset across the Karakoram Fault of approximately 130–190 km.

Description: Key Points: Daily snapshots of TIL strength; synoptic-Scale behavior of the TIL and shear/curl contributions to relative vorticity; TIL within ridges in midlatitude winter is stronger than polar summer TIL High-resolution GPS radio occultation temperature profiles from the COSMIC satellite mission (2007–2013) are used to obtain daily snapshots of the strength of the extratropical tropopause inversion layer (TIL). Its horizontal structure and day-to-day variability are linked to the synoptic situation at near-tropopause level. The strength of the TIL in cyclonic as well as anticyclonic conditions is investigated by separating relative vorticity into curl and shear terms. The analysis shows that the TIL has high zonal variability, and its strength is instantaneously adjusted to the synoptic situation at near-tropopause level. Our key finding is that the TIL within midlatitude ridges in winter is as strong as or stronger than the TIL in polar summer. The strongest TIL in anticyclonic conditions is related to the shear term, while the weaker TIL in cyclonic conditions is enhanced by the curl term.

Description: Seismicity and tectonic structure of the Alboran Sea were derived from a large amphibious seismological network deployed in the offshore basins and onshore in Spain and Morocco, an area where the convergence between the African and Eurasian plates causes distributed deformation. Crustal structure derived from local earthquake data suggests that the Alboran Sea is underlain by thinned continental crust with a mean thickness of about 20 km. During the 5 months of offshore network operation, a total of 229 local earthquakes were located within the Alboran Sea and neighboring areas. Earthquakes were generally crustal events, and in the offshore domain, most of them occurred at crustal levels of 2 to 15 km depth. Earthquakes in the Alboran Sea are poorly related to large-scale tectonic features and form a 20 to 40 km wide NNE-SSW trending belt of seismicity between Adra (Spain) and Al Hoceima (Morocco), supporting the case for a major left-lateral shear zone across the Alboran Sea. Such a shear zone is in accord with high-resolution bathymetric data and seismic reflection imaging, indicating a number of small active fault zones, some of which offset the seafloor, rather than supporting a well-defined discrete plate boundary fault. Moreover, a number of large faults known to be active as evidenced from bathymetry, seismic reflection, and paleoseismic data such as the Yusuf and Carboneras faults were seismically inactive. Earthquakes below the Western Alboran Basin occurred at 70 to 110 km depth and hence reflected intermediate depth seismicity related to subducted lithosphere.

Description: Observations show that the Equatorial Atlantic Zonal Mode (ZM) obeys similar physics to the El Niño Southern Oscillation (ENSO): positive Bjerknes and delayed negative feedbacks. This implies the ZM may be predictable on seasonal timescales, but models demonstrate little prediction skill in this region. In this study using different configurations of the Kiel Climate Model (KCM) exhibiting different levels of systematic error, we show that a reasonable simulation of the ZM depends on realistic representation of the mean state, i.e., surface easterlies along the equator, upward sloping thermocline to the east, with an equatorial SST cold tongue in the east. We further attribute the differences in interannual variability among the simulations to the individual components of the positive Bjerknes and delayed negative feedbacks. Differences in the seasonality of the variability are similarly related to the impact of seasonal biases on the Bjerknes feedback. Our results suggest that model physics must be enhanced to enable skillful seasonal predictions in the Tropical Atlantic Sector, although some improvement with regard to the simulation of Equatorial Atlantic interannual variability may be achieved by momentum flux correction. This pertains especially to the seasonal phase locking of interannual SST variability.

Description: Cell size is one of the ecologically most important traits of phytoplankton. The cell size variation is frequently related to temperature and nutrient limitation. In order to disentangle the role of both factors, an experiment was conducted to determine the possible interactions of these factors. Baltic Sea water containing the natural plankton community was used. We performed a factorial combined experiment of temperature, type of nutrient limitation (N vs. P), and strength of nutrient limitation. The type of nutrient limitation was manipulated by altering the N:P ratio of the medium (balanced, N and P limitation) and strength by the dilution rate (0% and 50%) of the semicontinuous cultures. The negative effect of temperature on cell size was strongest under N limitation, intermediate under P limitation, and weakest when N and P were supplied at balanced ratios. However, temperature also influenced the intensity of nutrient imitation, because at higher temperature there was a tendency for dissolved nutrient concentrations to be lower, while the C:N or C:P ratio being higher... higher at identical dilution rates and medium composition. Analyzing the response of cell size to C:N ratios (as index of N limitation) and C:P ratios (as index of P limitation) indicated a clear dominance of the nutrient effect over the direct temperature effect, although the temperature effect was also significant.

Description: The RNA/DNA ratio commonly used as proxy for the nutritional condition of fish larvae is affected by RNA degradation during analysis. For evaluation of two strategies to improve RNA integrity, a three-week feeding trial was carried out to assess the suitability of two nematode species (fam. Panagrolaimidae) as feed for newly hatched carp larvae (Cyprinus carpio) in comparison to Artemia nauplii (Artemia sp.) and a commercial dry feed. Aiming for an increased reproducibility of RNA/DNA determination, a high-salt inactivation (RNA later) as well as a targeted approach with a recombinant RNase inhibitor were compared to the classical protocol using lab chip technology. Improved RNA integrity was observed with high-salt inactivation when compared with a strategy applying a specific RNase inhibitor or the classic protocol. Carp larvae fed Artemia for 2 weeks and then dry feed for 1 week revealed the best overall growth performance as well as survival [83.0 ± 35.2 mg fresh weight (FW), 20.0 ± 2.4 mm total length (TL), 86.6 ± 11.7% survival]. Larvae fed the nematode species Panagrellus redivivus for 1 week and subsequently dry feed for 2 weeks (37.4 ± 29.1 mg FW, 14.7 ± 2.8 mm TL, 76.0 ± 6.0% survival) performed better than larvae fed with dry feed alone (28.2 ± 29.6 mg FW, 14.3 ± 2.9 mm TL, 54.3 ± 14.2% survival) or those receiving Panagrellus for 2 weeks. Between both nematode species, Panagrellus was a better feed with regard to growth performance and survival. RNA/DNA ratios ranged between 0.65 ± 0.27 (8 days post-hatch) and 1.96 ± 0.63 (22 days post-hatch) and were in the same treatment order as the other growth parameters. RNA/DNA ratios were significantly correlated with the growth rate, and decreasing RNA/DNA ratios in larger larvae may reflect decreasing growth rates with size rather than decreased nutritional status. Here, an improved RNA/DNA ratio protocol is presented in a feeding trial that reveals the suitability of nematodes as a first feed for common carp larvae.

Description: We investigate how well a suite of regional climate models (RCMs) from the ENSEMBLES project represents the residual spatial dependence of daily precipitation. The study area we consider is a 200 km×200 km region in south central Norway, with RCMs driven by ERA-40 boundary conditions at a horizontal resolution of approximately 25 km×25 km. We model the residual spatial dependence with pair-copula constructions, which allows us to assess both the overall and tail dependence in precipitation, including uncertainty estimates. The selected RCMs reproduce the overall dependence rather well, though the discrepancies compared to observations are substantial. All models overestimate the overall dependence in the west-east direction. They also overestimate the upper tail dependence in the north-south direction during winter, and in the west-east direction during summer, whereas they tend to underestimate this dependence in the north-south direction in summer. Moreover, many of the climate models do not simulate the small-scale dependence patterns caused by the pronounced orography well. However, the misrepresented residual spatial dependence does not seem to affect estimates of high quantiles of extreme precipitation aggregated over a few grid boxes. The underestimation of the area-aggregated extreme precipitation is due mainly to the well-known underestimation of the univariate margins for individual grid boxes, suggesting that the correction of RCM biases in precipitation might be feasible

Description: Growing slowly, marine N2 fixers are generally expected to be competitive only where nitrogen (N) supply is low relative to that of phosphorus (P) with respect to the cellular N:P ratio (R) of non-fixing phytoplankton. This is at odds with observed high N2 fixation rates in the oligotrophic North Atlantic where the ratio of nutrients supplied to the surface is elevated in N relative to the average R (16:1). In this study, we investigate several mechanisms to solve this puzzle: iron limitation, phosphorus enhancement by preferential remineralization or stoichiometric diversity of phytoplankton, and dissolved organic phosphorus (DOP) utilization. Combining resource competition theory and a global coupled ecosystem-circulation model we find that the additional N and energy investments required for exo-enzymatic break-down of DOP gives N2 fixers a competitive advantage in oligotrophic P-starved regions. Accounting for this mechanism expands the ecological niche of N2-fixers also to regions where the nutrient supply is high in N relative to R, yielding, in our model, a pattern consistent with the observed high N2-fixation rates in the oligotrophic North Atlantic.

Description: Mesoscale eddies in Oxygen Minimum Zones (OMZ's) have been identified as important fixed nitrogen (N) loss hotspots that may significantly impact both the global rate of N-loss as well as the ocean's N isotope budget. They also represent ‘natural tracer experiments’ with intensified biogeochemical signals that can be exploited to understand the large-scale processes that control N-loss and associated isotope effects (ε; the ‰ deviation from 1 in the ratio of reaction rate constants for the light versus the heavy isotopologues). We observed large ranges in the concentrations and N and O isotopic compositions of nitrate (NO3−), nitrite (NO2−) and biogenic N2 associated with an anticyclonic eddy in the Peru OMZ during two cruises in November and December 2012. In the eddy's center where NO3− was nearly exhausted, we measured the highest δ15N values for both NO3− and NO2− (up to ~70‰ and 50‰) ever reported for an OMZ. Correspondingly, N deficit and biogenic N2-N concentrations were also the highest near the eddy's center (up to ~40 µmol L−1). δ15N-N2 also varied with biogenic N2 production, following kinetic isotopic fractionation during NO2− reduction to N2 and, for the first time, provided an independent assessment of N isotope fractionation during OMZ N-loss. We found apparent variable ε for NO3− reduction (up to ~30‰ in the presence of NO2−). However, the overall ε for N-loss was calculated to be only ~13-14‰ (as compared to canonical values of ~20-30‰) assuming a closed system and only slightly higher assuming an open system (16-19‰). Our results were similar whether calculated from the disappearance of DIN (NO3− + NO2−) or from the appearance of N2 and changes in isotopic composition. Further, we calculated the separate ε for NO3− reduction to NO2− and NO2− reduction to N2 of ~16-21‰ and ~12‰, respectively, when the effect of NO2− oxidation could be removed. These results, together with the relationship between N and O of NO3− isotopes and the difference in δ15N between NO3− and NO2-, confirm a role for NO2− oxidation in increasing the apparent ε associated with NO3− reduction. The lower ε for NO3− and NO2− reduction as well as N-loss calculated in this study could help reconcile the current imbalance in the global N budget if they are representative of OMZ N-loss.

Description: The observed geomorphology and calculated thermal histories of the Bhutan Himalaya provide an excellent platform to test ideas regarding the influence of tectonics and climate on the evolution of a convergentmountain range. However, little consensus has been reached regarding the late Cenozoic history of the Bhutan Himalaya. Some researchers have argued that observed geologic relationships show slowing deformation rates, such that the range is decaying from a geomorphic perspective, while others see the range as growing and steepening. We suggest that a better understanding is possible through the integrated interpretation of geomorphic and thermochronometric data from the comparison of predictions from models of landscape evolution and thermal-kinematic models of orogenic systems. New thermochronometric data throughout Bhutan aremost consistent with a significant decrease in erosion rates, from2 to 3 km/Ma down to 0.1–0.3 km/Ma, around 6–4Ma. We interpret this pattern as a decrease in rock uplift rates due to the activation of contractional structures of the Shillong Plateau, an uplifted region approximately 100 km south of Bhutan. However, low-relief, fluvial landscapes throughout the Bhutanese hinterland record a late pulse of surface uplift likely due to a recent increase in rock uplift rates. Constraints from our youngest thermochronometers suggest that this increase in rock uplift and surface uplift occurred within the last 1.75Ma. These results imply that the dynamics of the Bhutan Himalaya and Shillong Plateau have been linked during the late Cenozoic, with structural elements of both regions active in variable ways and times over that interval.

Description: Within the Sea of Marmara, the highly active North Anatolian Fault (NAF) is responsible for major earthquakes (Mw ≥ 7), and acts as a pathway for fluid migration from deep sources to the seafloor. This work reports on pore water geochemistry from three sediment cores collected in the Gulfs of Izmit and Gemlik, along the Northern and the Middle strands of the NAF, respectively. The resulting data set shows that anaerobic oxidation of methane (AOM) is the major process responsible for sulfate depletion in the shallow sediment. In the Gulf of Gemlik, depth concentration profiles of both sulfate and alkalinity exhibit a kink-type profile. The Sulfate Methane Transition Zone (SMTZ) is located at moderate depth in the area. In the Gulf of Izmit, the low concentrations observed near the seawater-sediment interface for sulfate, calcium, strontium, and magnesium result from rapid geochemical processes, AOM, and carbonate precipitation, occurring in the uppermost part of the sedimentary column and sustained by free methane accumulation. Barite dissolution and carbonate recrystallization have also been identified at deeper depth at the easternmost basin of the Gulf of Izmit. This is supported by the profile of the strontium isotope ratios (87Sr/86Sr) as a function of depth which exhibits negative anomalies compared to the modern seawater value. The strontium isotopic signature also shows that these carbonates had precipitated during the reconnection of the Sea of Marmara with the Mediterranean Sea. Finally, a first attempt to interpret the sulfate profiles observed in the light of the seismic activity at both sites is presented. We propose the hypothesis that seismic activity in the areas is responsible for the transient sulfate profile, and that the very shallow SMTZ depths observed in the Gulf of Izmit is likely due to episodic release of significant amount of methane.

Description: Understanding of the evolution of fluid-fault interactions during earthquake cycles is a challenge that acoustic gas emission studies can contribute. A survey of the Sea of Marmara using a shipborne, multibeam echo sounder, with water column records, provided an accurate spatial distribution of offshore seeps. Gas emissions are spatially controlled by a combination of factors, including fault and fracture networks in connection to the Main Marmara Fault system and inherited faults, the nature and thickness of sediments (e.g., occurrence of impermeable or gas-bearing sediments and landslides), and the connectivity between the seafloor and gas sources, particularly in relation to the Eocene Thrace Basin. The relationship between seepage and fault activity is not linear, as active faults do not necessarily conduct gas, and scarps corresponding to deactivated fault strands may continue to channel fluids. Within sedimentary basins, gas is not expelled at the seafloor unless faulting, deformation, or erosional processes affect the sediments. On topographic highs, gas flares occur along the main fault scarps but are also associated with sediment deformation. The occurrence of gas emissions appears to be correlated with the distribution of microseismicity. The relative absence of earthquake-induced ground shaking along parts of the Istanbul-Silivri and Princes Islands segments is likely the primary factor responsible for the comparative lack of gas emissions along these fault segments. The spatiotemporal distribution of gas seeps may thus provide a complementary way to constrain earthquake geohazards by focusing the study on some key fault segments, e.g., the northern part of the locked Princes Islands segment.

Description: We examine the impact of sea surface temperature (SST) bias on inter-annual variability during boreal summer over the equatorial Atlantic using two suites of partially coupled model (PCM) experiments with and without surface heat flux correction. In the experiments, surface wind stress anomalies are specified from observations while the thermodynamic coupling between the atmospheric and oceanic components is still active as in the fully coupled model. The results show that the PCM can capture around 50% of the observed variability associated with the Atlantic Niño from 1958 to 2013, but only when the bias is substantially reduced using heat flux correction, with no skill otherwise. We further show that ocean dynamics explain a large part of the SST variability in the eastern equatorial Atlantic in both observations (50-60%) and the PCM experiments (50-70%) with heat flux correction, implying that the seasonal predictability potential may be higher than currently thought.

Description: Galvanic distortion of magnetotelluric (MT) data due to small-scale surficial bodies or due to topography is one of the major factors that prevents accurate imaging of the subsurface. We present a 3-D algorithm for joint inversion of MT impedance tensor data and a frequency-independent full distortion matrix that circumvents this problem. We perform several tests of our algorithm on synthetic data affected by different amounts of distortion. These tests show that joint inversion leads to a better conductivity model compared to the inversion of the MT impedance tensor without any correction for distortion effects. For highly distorted data, inversion without any distortion correction results in strong artefacts and we cannot fit the data to the specified noise level. When the distortion is reduced, we can fit the data to an RMS of one, but still observe artefacts in the shallow part of the model. In contrast, in both cases our joint inversion can fit the data within the assumed noise level and the resulting models are comparable to the inversion of undistorted data. In addition, we show that the elements of the full distortion matrix can be well resolved by our algorithm. Finally, when inverting undistorted data, including the distortion matrix in the inversion only results in a minor loss of resolution. We therefore consider our new approach a promising tool for the general analysis of field MT data.

Description: Submarine landslides can cause damaging tsunamis, the height of which scales up with the volume of the displaced mass. The largest underwater landslides are far bigger than any landslides on land, and these submarine megaslides tend to occur on open continental slopes with remarkably low gradients of less than 2°. For geohazard assessments it is essential to understand what preconditions and triggers slope failure on such low gradients. Previous work has suggested that generation of high excess pore pressure due to rapid sediment deposition plays a key role in such failures. However, submarine slope failure also occurs where sedimentation rates are low (〈0.15 m/kyr), such as off northwest Africa. We use a fully coupled stress and fluid flow finite element model to test whether such low sedimentation rates can generate sufficient excess pore pressures to cause failure of a 2° slope. The sensitivity of overpressure generation and slope stability is assessed with respect to different sedimentation rates and patterns, sediment consolidation properties, and stratigraphic layer configurations. The simulations show that, in general, it is difficult to generate significant excess pore pressure if sediment accumulation is slow and the only pressure source. However, we identify a sediment compression behavior that can lead to submarine landslides in locations worldwide. Our results imply that compressibility is an important factor for the stability of low gradient continental slopes.

Description: The Baltic Sea is a marginal sea, located in a highly industrialized region in Central Northern Europe. Saltwater inflows from the North Sea and associated ventilation of the deep exert crucial control on the entire Baltic Sea ecosystem. This study explores the impact of anticipated sea level changes on the dynamics of those inflows. We use a numerical oceanic general circulation model covering both the Baltic and the North Sea. The model successfully retraces the essential ventilation dynamics throughout the period 1961–2007. A suite of idealized experiments suggests that rising sea level is associated with intensified ventilation as saltwater inflows become stronger, longer, and more frequent. Expressed quantitatively as a salinity increase in the deep central Baltic Sea, we find that a sea level rise of 1 m triggers a saltening of more than 1 PSU. This substantial increase in ventilation is the consequence of the increasing cross section in the Danish Straits amplified by a reduction of vertical mixing

Description: Current estimates suggest that more than 60% of the global seafloor are covered by millions of abyssal hills and mountains. These features introduce spatial fluid-dynamic granularity whose influence on deep-ocean sediment biogeochemistry is unknown. Here we compare biogeochemical surface-sediment properties from a fluid-dynamically well-characterized abyssal hill and upstream plain: (1) In hill sediments, organic-carbon and -nitrogen contents are only about half as high as on the plain while proteinaceous material displays less degradation; (2) on the hill, more coarse-grained sediments (reducing particle surface area) and very variable calcite contents (influencing particle surface charge) are proposed to reduce the extent, and influence compound-specificity, of sorptive organic-matter preservation. Further studies are needed to estimate the representativeness of the results in a global context. Given millions of abyssal hills and mountains, their integrative influence on formation and composition of deep-sea sediments warrants more attention.

Description: Estimating the spatial position of organisms is essential to quantify interactions between the organism and the characteristics of its surroundings, for example, predator–prey interactions, habitat selection, and social associations. Because marine mammals spend most of their time under water and may appear at the surface only briefly, determining their exact geographic location can be challenging. Here, we developed a photogrammetric method to accurately estimate the spatial position of marine mammals or birds at the sea surface. Digital recordings containing landscape features with known geographic coordinates can be used to estimate the distance and bearing of each sighting relative to the observation point. The method can correct for frame rotation, estimates pixel size based on the reference points, and can be applied to scenarios with and without a visible horizon. A set of R functions was written to process the images and obtain accurate geographic coordinates for each sighting. The method is applied to estimate the spatiotemporal fine-scale distribution of harbour porpoises in a tidal inlet. Video recordings of harbour porpoises were made from land, using a standard digital single-lens reflex (DSLR) camera, positioned at a height of 9.59 m above mean sea level. Porpoises were detected up to a distance of ~3136 m (mean 596 m), with a mean location error of 12 m. The method presented here allows for multiple detections of different individuals within a single video frame and for tracking movements of individuals based on repeated sightings. In comparison with traditional methods, this method only requires a digital camera to provide accurate location estimates. It especially has great potential in regions with ample data on local (a)biotic conditions, to help resolve functional mechanisms underlying habitat selection and other behaviors in marine mammals in coastal areas.

Description: The Southern Ocean (SO) is an important CO2 reservoir, some of which enters via the production, sinking, and remineralization of organic matter. Recent work suggests that the fraction of production that sinks is inversely related to production in the SO, a suggestion that we confirm from 20 stations in the Scotia Sea. The efficiency with which exported material is transferred to depth (transfer efficiency) is believed to be low in high-latitude systems. However, our estimates of transfer efficiency are bimodal, with stations in the seasonal ice zone showing intense losses and others displaying increases in flux with depth. Zooplankton fecal pellets dominated the organic carbon flux and at stations with transfer efficiency 〉100% fecal pellets were brown, indicative of fresh phytodetritus. We suggest that active flux mediated by zooplankton vertical migration and the presence of sea ice regulates the transfer of organic carbon into the oceans interior in the Southern Ocean.

Description: Information about oceanic nitrate is crucial for making inferences about marine biological production and the efficiency of the biological carbon pump. While there are no optical properties that allow direct estimation of inorganic nitrogen, its correlation with other biogeochemical variables may permit its inference from satellite data. Here we report a new method for estimating monthly mean surface nitrate concentrations employing local multiple linear regressions on a global 1° by 1° resolution grid, using satellite-derived sea surface temperature, chlorophyll, and modeled mixed layer depth. Our method is able to reproduce the interannual variability of independent in situ nitrate observations at the Bermuda Atlantic Time Series, the Hawaii Ocean Time series, the California coast, and the southern New Zealand region. Our new method is shown to be more accurate than previous algorithms and thus can provide improved information on temporal and spatial nutrient variations beyond the climatological mean at regional and global scales.

Description: Arctic primary production is sensitive to reductions in sea ice cover, and will likely increase into the future. Whether this increased primary production (PP) will translate into increased export of particulate organic carbon (POC) is currently unclear. Here we report on the POC export efficiency during summer 2012 in the Atlantic sector of the Arctic Ocean. We coupled 234-thorium based estimates of the export flux of POC to onboard incubation-based estimates of PP. Export efficiency (defined as the fraction of PP that is exported below 100 m depth: ThE-ratio) showed large variability (0.09 ± 0.19–1.3 ± 0.3). The highest ThE-ratio (1.3 ± 0.3) was recorded in a mono-specific bloom of Phaeocystis pouchetii located in the ice edge. Blooming diatom dominated areas also had high ThE-ratios (0.1 ± 0.1–0.5 ± 0.2), while mixed and/or prebloom communities showed lower ThE-ratios (0.10 ± 0.03–0.19 ± 0.05). Furthermore, using oxygen saturation, bacterial abundance, bacterial production, and zooplankton oxygen demand, we also investigated spatial variability in the degree to which this sinking material may be remineralized in the upper mesopelagic (〈300 m). Our results suggest that blooming diatoms and P. pouchetii can export a significant fraction of their biomass below the surface layer (100 m) in the open Arctic Ocean. Also, we show evidence that the material sinking from a P. pouchetii bloom may be remineralized (〉100 m) at a similar rate as the material sinking from diatom blooms in the upper mesopelagic, contrary to previous findings.

Description: There is growing concern that modifications to the global environment such as ocean acidification and increased ultraviolet radiation may interact with anthropogenic pollutants to adversely affect the future marine environment. Despite this, little is known about the nature of the potential risks posed by such interactions. Here, we performed a multifactorial microcosm experiment to assess the impact of ocean acidification, ultraviolet B (UV-B) radiation and oil hydrocarbon contamination on sediment chemistry, the microbial community (composition and function) and biochemical marker response of selected indicator species. We found that increased ocean acidification and oil contamination in the absence of UV-B will significantly alter bacterial composition by, among other things, greatly reducing the relative abundance of Desulfobacterales, known to be important oil hydrocarbon degraders. Along with changes in bacterial composition, we identified concomitant shifts in the composition of oil hydrocarbons in the sediment and an increase in oxidative stress effects on our indicator species. Interestingly, our study identifies UV-B as a critical component in the interaction between these factors, as its presence alleviates harmful effects caused by the combination of reduced pH and oil pollution. The model system used here shows that the interactive effect of reduced pH and oil contamination can adversely affect the structure and functioning of sediment benthic communities, with the potential to exacerbate the toxicity of oil hydrocarbons in marine ecosystems.

Description: Large amounts of methane hydrate locked up within marine sediments are vulnerable to climate change. Changes in bottom water temperatures may lead to their destabilization and the release of methane into the water column or even the atmosphere. In a multimodel approach, the possible impact of destabilizing methane hydrates onto global climate within the next century is evaluated. The focus is set on changing bottom water temperatures to infer the response of the global methane hydrate inventory to future climate change. Present and future bottom water temperatures are evaluated by the combined use of hindcast high-resolution ocean circulation simulations and climate modeling for the next century. The changing global hydrate inventory is computed using the parameterized transfer function recently proposed by Wallmann et al. (2012). We find that the present-day world's total marine methane hydrate inventory is estimated to be 1146Gt of methane carbon. Within the next 100years this global inventory may be reduced by ∼0.03% (releasing ∼473Mt methane from the seafloor). Compared to the present-day annual emissions of anthropogenic methane, the amount of methane released from melting hydrates by 2100 is small and will not have a major impact on the global climate. On a regional scale, ocean bottom warming over the next 100years will result in a relatively large decrease in the methane hydrate deposits, with the Arctic and Blake Ridge region, offshore South Carolina, being most affected.

Description: The cyanobacterium Trichodesmium is responsible for a significant proportion of the annual "new" nitrogen introduced into the global ocean. Despite being arguably the best studied marine diazotroph, the factors controlling the distribution and growth of Trichodesmium remain a subject of debate, with sea surface temperature, the partial pressure of CO2, and nutrients including iron (Fe) and phosphorus (P), all suggested to be important. Synthesizing data from seven cruises collectively spanning large temporal and spatial scales across the Atlantic Ocean, including two previously unreported studies crossing the largely undersampled South Atlantic gyre, we assessed the relationship between proposed environmental drivers and both community N2 fixation rates and the distribution of Trichodesmium. Simple linear regression analysis would suggest no relationship between any of the sampled environmental variables and N2 fixation rates. However, considering the concentrations of iron and phosphorus together within a simplified resource-ratio framework, illustrated using an idealized numerical model, indicates the combined effects these nutrients have on Trichodesmium and broader diazotroph biogeography, alongside the reciprocal maintenance of different biogeographic provinces of the (sub)tropical Atlantic in states of Fe or P oligotrophy by diazotrophy. The qualitative principles of the resource-ratio framework are argued to be consistent with both the previously described North-South Atlantic contrast in Trichodesmium abundance and the presence and consequence of a substantial non-Trichodesmium diazotrophic community in the western South Atlantic subtropical gyre. A comprehensive, observation-based explanation of the interactions between Trichodesmium and the wider diazotrophic community with iron and phosphorus in the Atlantic Ocean is thus revealed.

Description: Quantifying marine methane fluxes of free gas (bubbles) from the seafloor into the water column is of importance for climate related studies, for example, in the Arctic, reliable methodologies are also of interest for studying man-made gas and oil leakage systems at hydrocarbon production sites. Hydroacoustic surveys with singlebeam and nowadays also multibeam systems have been proven to be a successful approach to detect bubble release from the seabed. A number of publications used singlebeam echosounder data to indirectly quantify free gas fluxes via empirical correlations between gas fluxes observed at the seafloor and the hydroacoustic response. Others utilize the hydroacoustic information in an inverse modeling approach to derive bubble fluxes. Here, we present an advanced methodology using data from splitbeam echosounder systems for analyzing gas release water depth (〉 100m). We introduce a new MATLAB-based software for processing and interactively editing data and we present how bubble-size distribution, bubble rising speed and the model used for calculating the backscatter response of single bubbles influence the final gas flow rate calculations. As a result, we highlight the need for further investigations on how large, wobbly bubbles, bubble clouds, and multi-scattering influence target strength. The results emphasize that detailed studies of bubble-size distributions and rising speeds need to be performed in parallel to hydroacoustic surveys to achieve realistic mediated methane flow rate and flux quantifications.

Description: Literature data on benthic dissolved iron (DFe) fluxes (µmol m−2 d−1), bottom water oxygen concentrations (O2BW, μM), and sedimentary carbon oxidation rates (COX, mmol m−2 d−1) from water depths ranging from 80 to 3700 m were assembled. The data were analyzed with a diagenetic iron model to derive an empirical function for predicting benthic DFe fluxes: inline image where γ (= 170 µmol m−2 d−1) is the maximum flux for sediments at steady state located away from river mouths. This simple function unifies previous observations that COX and O2BW are important controls on DFe fluxes. Upscaling predicts a global DFe flux from continental margin sediments of 109 ± 55 Gmol yr−1, of which 72 Gmol yr−1 is contributed by the shelf (〈200 m) and 37 Gmol yr−1 by slope sediments (200–2000 m). The predicted deep-sea flux (〉2000 m) of 41 ± 21 Gmol yr−1 is unsupported by empirical data. Previous estimates of benthic DFe fluxes derived using global iron models are far lower (approximately 10–30 Gmol yr−1). This can be attributed to (i) inadequate treatment of the role of oxygen on benthic DFe fluxes and (ii) improper consideration of continental shelf processes due to coarse spatial resolution. Globally averaged DFe concentrations in surface waters simulated with the intermediate-complexity University of Victoria Earth System Climate Model were a factor of 2 higher with the new function. We conclude that (i) the DFe flux from marginal sediments has been underestimated in the marine iron cycle and (ii) iron scavenging in the water column is more intense than currently presumed.

Description: Identification of breeding sites remains a critical step in species conservation, particularly in procellariiform seabirds whose threat status is of global concern. We designed and conducted an integrative radiotelemetry approach to uncover the breeding grounds of the critically endangered New Zealand Storm Petrel Fregetta maoriana (NZSP), a species considered extinct before its rediscovery in 2003. Solar-powered automated radio receivers and hand-held telemetry were used to detect the presence of birds on three island groups in the Hauraki Gulf near Auckland, New Zealand. At least 11 NZSP captured and radiotagged at sea were detected at night near Te Hauturu-o-Toi/Little Barrier Island with the detection of an incubating bird leading to the discovery of the first known breeding site for this species. In total, four NZSP breeding burrows were detected under mature forest canopy and three adult NZSP and two NZSP chicks were ringed. Telemetry data indicated NZSP showed strong moonlight avoidance behaviour over the breeding site, had incubation shifts of approximately 5 days and had a breeding season extending from February to June/July, a different season from other Procellariiformes in the region. Radiotelemetry, in combination with rigorously collected field data on species distribution, offers a valuable technique for locating breeding grounds of procellariiform seabirds and gaining insights into breeding biology while minimizing disturbance to sensitive species or damage to fragile habitat. Our study suggests an avenue for other breeding ground searches in one of the most threatened avian Orders, and highlights the general need for information on the location of breeding sites and understanding the breeding biology in data-deficient birds.

Description: Dissolved organic nitrogen (DON) and phosphorus (DOP) represent the most abundant form of their respective nutrient pool in the surface layer of the oligotrophic oceans and play an important role in nutrient cycling and productivity. Since DOP is generally more labile than DON, it provides additional P that may stimulate growth of nitrogen-fixing diazotrophs that supply fixed nitrogen to balance denitrification in the ocean. In this study, we introduce semirecalcitrant components of DON and DOP as state variables in an existing global ocean-atmosphere-sea ice-biogeochemistry model of intermediate complexity to assess their impact on the spatial distribution of nitrogen fixation and the size of the marine fixed nitrogen inventory. Large-scale surface data sets of global DON and Atlantic Ocean DOP are used to constrain the model. Our simulations suggest that both preferential DOP remineralization and phytoplankton DOP uptake are important "non-Redfield" processes (i.e., deviate from molar N:P=16) that need to be accounted for to explain the observed patterns of DOP. Additional non-Redfield DOP sensitivity experiments testing dissolved organic matter (DOM) production rate uncertainties that best reproduce the observed spatial patterns of DON and DOP stimulate additional nitrogen fixation that increases the size of the global marine fixed nitrogen inventory by 4.7±1.7% compared to the simulation assuming Redfield DOM stoichiometry that underestimates the observed nitrogen inventory. The extra 8Tgyr-1 of nitrogen fixation stimulated in the Atlantic Ocean is mainly responsible for this increase due to its large spatial separation from water column denitrification, which buffers any potential nitrogen surplus in the Pacific Ocean. Our study suggests that the marine fixed nitrogen budget is sensitive to non-Redfield DOP dynamics because access to the relatively labile DOP pool expands the ecological niche for nitrogen-fixing diazotrophs.

Description: Geophysical data from the MEDOC experiment across the Northern Tyrrhenian backarc basin has mapped a failed rift during backarc extension of cratonic Variscan lithosphere. In contrast, data across the Central Tyrrhenian have revealed the presence of magmatic accretion followed by mantle exhumation after continental breakup. Here we analyse the MEDOC transect E–F, which extends from Sardinia to the Campania margin at 40.5°N, to define the distribution of geological domains in the transition from the complex Central Tyrrhenian to the extended continental crust of the Northern Tyrrhenian. The crust and uppermost mantle structure along this ∼400-km-long transect have been investigated based on wide-angle seismic data, gravity modelling and multichannel seismic reflection imaging. The P-wave tomographic model together with a P-wave-velocity-derived density model and the multichannel seismic images reveal seven different domains along this transect, in contrast to the simpler structure to the south and north. The stretched continental crust under Sardinia margin abuts the magmatic crust of Cornaglia Terrace, where accretion likely occurred during backarc extension. Eastwards, around Secchi seamount, a second segment of thinned continental crust (7–8 km) is observed. Two short segments of magmatically modified continental crust are separated by the ∼5-km-wide segment of the Vavilov basin possibly made of exhumed mantle rocks. The eastern segment of the 40.5°N transect E–F is characterized by continental crust extending from mainland Italy towards the Campania margin. Ground truthing and prior geophysical information obtained north and south of transect E–F was integrated in this study to map the spatial distribution of basement domains in the Central Tyrrhenian basin. The northward transition of crustal domains depicts a complex 3-D structure represented by abrupt spatial changes of magmatic and non-magmatic crustal domains. These observations imply rapid variations of magmatic activity difficult to reconcile with current models of extension of continental lithosphere essentially 2-D over long distances.

Description: Cold-water coral ecosystems present common carbonate factories along the Atlantic continental margins, where they can form large reef structures. There is increasing knowledge on their ecology, molecular genetics, environmental controls and threats available. However, information on their carbo-nate production and accumulation is still very limited, even though this information is essential for their evaluation as carbonate sinks. The aim of this study is to provide high-resolution reef aggradation and carbonate accumulation rates for Norwegian cold-water coral reefs from various settings (sunds, inner shelf and shelf margin). Furthermore, it introduces a new approach for the evaluation of the cold-water coral preservation within cold-water coral deposits by computed tomography analysis. This approach allows the differentiation of various kinds of cold-water coral deposits by their macrofossil clast size and orientation signature. The obtained results suggest that preservation of cold-water coral frameworks in living position is favoured by high reef aggradation rates, while preservation of coral rubble prevails by moderate aggradation rates. A high degree of macrofossil fragmentation indicates condensed intervals or unconformities. The observed aggradation rates with up to 1500 cm kyr−1 exhibit the highest rates from cold-water coral reefs so far. Reef aggradation within the studied cores was restricted to the Early and Late Holocene. Available datings of Norwegian cold-water corals support this age pattern for other fjords while, on the shelf, cold-water coral ages are reported additionally from the early Middle Holocene. The obtained mean carbonate accumulation rates of up to 103 g cm−2 kyr−1 exceed previous estimates of cold-water coral reefs by a factor of two to three and by almost one order of magnitude to adjacent sedimentary environments (shelf, slope and deep sea). Only fjord basins locally exhibit carbonate accumulation rates in the range of the cold-water coral reefs. Furthermore, cold-water coral reef carbonate accumulation rates are in the range of tropical reef carbonate accumulation rates. These results clearly suggest the importance of cold-water coral reefs as local, maybe regional to global, carbonate sinks

Description: Spaceborne sea surface salinity (SSS) measurements provided by the European Space Agency's (ESA) “Soil Moisture and Ocean Salinity” (SMOS) and the National Aeronautical Space Agency's (NASA) “Aquarius/SAC-D” missions, covering the period from May 2012 to April 2013, are compared against in situ salinity measurements obtained in the northern North Atlantic between 20°N and 80°N. In cold water, SMOS SSS fields show a temperature-dependent negative SSS bias of up to −2 g/kg for temperatures 〈5°C. Removing this bias significantly reduces the differences to independent ship-based thermosalinograph data but potentially corrects simultaneously also other effects not related to temperature, such as land contamination or radio frequency interference (RFI). The resulting time-mean bias, averaged over the study area, amounts to 0.1 g/kg. A respective correction applied previously by the Jet Propulsion Laboratory to the Aquarius data is shown here to have successfully removed an SST-related bias in our study area. For both missions, resulting spatial structures of SSS variability agree very well with those available from an eddy-resolving numerical simulation and from Argo data and, additionally they also show substantial salinity changes on monthly and seasonal time scales. Some fraction of the root-mean-square difference between in situ, and SMOS and Aquarius data (approximately 0.9 g/kg) can be attributed to short time scale ocean processes, notably at the Greenland shelf, and could represent associated sampling errors there.

Description: The western boundary current system off Brazil is a key region for diagnosing variations of the Atlantic meridional overturning circulation (AMOC) and the southern subtropical cell. In July 2013 a mooring array was installed off the coast at 11°S similar to an array installed between 2000 and 2004 at the same location. Here we present results from two research cruises and the first 10.5 months of moored observations in comparison to the observations a decade ago. Average transports of the North Brazil Undercurrent and the Deep Western Boundary Current (DWBC) have not changed between the observational periods. DWBC eddies that are predicted to disappear with a weakening AMOC are still present. Upper layer changes in salinity and oxygen within the last decade are consistent with an increased Agulhas leakage, while at depths water mass changes are likely related to changes in the North Atlantic as well as tropical circulation changes.

Description: Variability of mid-latitude blocking in the boreal winter northern hemisphere is investigated for the period 1960/61 to 2001/02 by means of relaxation experiments with the model of the European Center for Medium-Range Weather Forecasts. It is shown that there is pronounced interannual and decadal variability in blocking, especially over the Eurasian continent, consistent with previous studies. The relaxation experiments show that realistic variability in the tropics can account for a significant part of observed interannual blocking variability, but also that about half of the observed variability can only be explained by extratropical tropospheric variability. On the quasi-decadal time scale, extratropical sea surface temperature and sea-ice, in addition to tropical variability, play a more important role. The stratosphere, which has been shown to influence interannual variability of the North Atlantic Oscillation in previous studies, has no significant influence on blocking according to our analysis.

Description: The significance of bacteria for eukaryotic functioning is increasingly recognized. Coral reef ecosystems critically rely on the relationship between coral hosts and their intracellular photosynthetic dinoflagellates, but the role of the associated bacteria remains largely theoretical. Here, we set out to relate coral-associated bacterial communities of the fungid host species Ctenactis echinata to environmental settings (geographic location, substrate cover, summer/winter, nutrient and suspended matter concentrations) and coral host abundance. We show that bacterial diversity of C.echinata aligns with ecological differences between sites and that coral colonies sampled at the species' preferred habitats are primarily structured by one bacterial taxon (genus Endozoicomonas) representing more than 60% of all bacteria. In contrast, host microbiomes from lower populated coral habitats are less structured and more diverse. Our study demonstrates that the content and structure of the coral microbiome aligns with environmental differences and denotes habitat adequacy. Availability of a range of coral host habitats might be important for the conservation of distinct microbiome structures and diversity.

Description: Global climate change during the Late Pleistocene periodically encroached and then released habitat during the glacial cycles, causing range expansions and contractions in some species. These dynamics have played a major role in geographic radiations, diversification and speciation. We investigate these dynamics in the most widely distributed of marine mammals, the killer whale (Orcinus orca), using a global data set of over 450 samples. This marine top predator inhabits coastal and pelagic ecosystems ranging from the ice edge to the tropics, often exhibiting ecological, behavioural and morphological variation suggestive of local adaptation accompanied by reproductive isolation. Results suggest a rapid global radiation occurred over the last 350000years. Based on habitat models, we estimated there was only a 15% global contraction of core suitable habitat during the last glacial maximum, and the resources appeared to sustain a constant global effective female population size throughout the Late Pleistocene. Reconstruction of the ancestral phylogeography highlighted the high mobility of this species, identifying 22 strongly supported long-range dispersal events including interoceanic and interhemispheric movement. Despite this propensity for geographic dispersal, the increased sampling of this study uncovered very few potential examples of ancestral dispersal among ecotypes. Concordance of nuclear and mitochondrial data further confirms genetic cohesiveness, with little or no current gene flow among sympatric ecotypes. Taken as a whole, our data suggest that the glacial cycles influenced local populations in different ways, with no clear global pattern, but with secondary contact among lineages following long-range dispersal as a potential mechanism driving ecological diversification.

Description: We present results of marine MT acquisition in the Alboran sea that also incorporates previously acquired land MT from southern Spain into our analysis. The marine data show complex MT response functions with strong distortion due to seafloor topography and the coastline, but inclusion of high resolution topography and bathymetry and a seismically defined sediment unit into a 3D inversion model has allowed us to image the structure in the underlying mantle. The resulting resistivity model is broadly consistent with a geodynamic scenario that includes subduction of an eastward trending plate beneath Gibraltar, which plunges nearly vertically beneath the Alboran. Our model contains three primary features of interest: a resistive body beneath the central Alboran, which extends to a depth of ~150 km. At this depth, the mantle resistivity decreases to values of ~100 Ohm-m, slightly higher than those seen in typical asthenosphere at the same depth. This transition suggests a change in slab properties with depth, perhaps reflecting a change in the nature of the seafloor subducted in the past. Two conductive features in our model suggest the presence of fluids released by the subducting slab or a small amount of partial melt in the upper mantle (or both). Of these, the one in the center of the Alboran basin, in the uppermost-mantle (20-30km depth) beneath Neogene volcanics and west of the termination of the Nekkor Fault, is consistent with geochemical models, which infer highly thinned lithosphere and shallow melting in order to explain the petrology of seafloor volcanics.

Description: Climate model resolution can affect both the climate change signal and present-day representation of extreme precipitation. The need to parametrize convective processes raises questions about how well the response to warming of convective precipitation extremes is captured in such models. In particular, coastal precipitation extremes can be sensitive to sea surface temperature (SST) increase. Taking a recent coastal precipitation extreme as a showcase example, we explore the added value of convection-permitting models by comparing the response of the extreme precipitation to a wide range of SST forcings in an ensemble of regional climate model simulations using parametrized and explicit convection. Compared at the same spatial scale, we find that the increased local intensities of vertical motion and precipitation in the convection-permitting simulations play a crucial role in shaping a strongly nonlinear extreme precipitation response to SST increase, which is not evident when convection is parametrized. In the convection-permitting simulations, SST increase causes precipitation intensity to increase only until a threshold is reached, beyond which further SST increase does not enhance the precipitation. This flattened response results from an improved representation of convective downdrafts and near-surface cooling, which damp the further intensification of precipitation by stabilizing the lower troposphere locally and also create cold-pools that cause subsequent convection to be triggered at sea, rather than by the coastal orography. These features are not well represented in the parametrized convection simulations, resulting in precipitation intensity having a much more linear response to increasing SSTs

Description: The major geochemical characteristics of Red Sea brine are summarized for 11 brine-filled deeps located along the central graben axis between 19°N and 27°N. The major element composition of the different brine pools is mainly controlled by variable mixing situations of halite-saturated solution (evaporite dissolution) with Red Sea deep water. The brine chemistry is also influenced by hydrothermal water/rock interaction, whereas magmatic and sedimentary rock reactions can be distinguished by boron, lithium, and magnesium/calcium chemistry. Moreover, hydrocarbon chemistry (concentrations and δ 13 C data) of brine indicates variable injection of light hydrocarbons from organic source rocks and strong secondary (bacterial or thermogenic) degradation processes. A simple statistical cluster analysis approach was selected to look for similarities in brine chemistry and to classify the various brine pools, as the measured chemical brine compositions show remarkably strong concentration variations for some elements. The cluster analysis indicates two main classes of brine. Type I brine chemistry (Oceanographer and Kebrit Deeps) is controlled by evaporite dissolution and contributions from sediment alteration. The Type II brine (Suakin, Port Sudan, Erba, Albatross, Discovery, Atlantis II, Nereus, Shaban, and Conrad Deeps) is influenced by variable contributions from volcanic/ magmatic rock alteration. The chemical brine classification can be correlated with the sedimentary and tectonic setting of the related depressions. Type I brine-filled deeps are located slightly off-axis from the central Red Sea graben. A typical " collapse structure formation " which has been defined for the Kebrit Deep by evaluating seismic and geomorphological data probably corresponds to our Type I brine. Type II brine located in depressions in the northern Red Sea (i.e., Conrad and Shaban Deeps) could be correlated to " volcanic intrusion-/extrusion-related " deep formation. The chemical indications for hydrothermal influence on Conrad and Shaban Deep brine can be related to brines from the multi-deeps region in the central Red Sea, where volcanic/magmatic fluid/rock interaction is most obvious. The strongest hydrothermal influence is observed in Atlantis II brine (central multi-deeps region), which is also the hottest Red Sea brine body in 2011 (*68.2 °C).

Description: The Atlantis II Deep of the Red Sea hosts the largest known hydrothermal ore deposit on the ocean floor and the only modern analog of brine pool-type metal deposition. The deposit consists mainly of chemical-clastic sediments with input from basin-scale hydrothermal and detrital sources. A characteristic feature is the millimeter-scale layering of the sediments, which bears a strong resemblance to banded iron formation (BIF). Quantitative assessment of the mineralogy based on relogging of archived cores, detailed petrography, and sequential leaching experiments shows that Fe-(oxy)hydroxides, hydrothermal carbonates, sulfides, and authigenic clays are the main “ore” minerals. Mn-oxides were mainly deposited when the brine pool was more oxidized than it is today, but detailed logging shows that Fe-deposition and Mn-deposition also alternated at the scale of individual laminae, reflecting short-term fluctuations in the Lower Brine. Previous studies underestimated the importance of nonsulfide metal-bearing components, which formed by metal adsorption onto poorly crystalline Si-Fe-OOH particles. During diagenesis, the crystallinity of all phases increased, and the fine layering of the sediment was enhanced. Within a few meters of burial (corresponding to a few thousand years of deposition), biogenic (Ca)-carbonate was dissolved, manganosiderite formed, and metals originally in poorly crystalline phases or in pore water were incorporated into diagenetic sulfides, clays, and Fe-oxides. Permeable layers with abundant radiolarian tests were the focus for late-stage hydrothermal alteration and replacement, including deposition of amorphous silica and enrichment in elements such as Ba and Au.

Description: Coastal parts of Croatia are dominated by the SW-verging Dinaric foldbelt, to the west and SW of which is the Adriatic Basin (the stable foreland). In both areas, the stratigraphic column is dominated by a thick carbonate succession ranging from Carboniferous to Miocene. Four megasequences have been identified: (i) a pre-platform succession ranging in age from Late Carboniferous (Middle Pennsylvanian: Moscovian) to Early Jurassic (Early Toarcian; Brušane and Baške Ostarije Formations); (ii) an Early Jurassic to Late Cretaceous platform megasequence (Mali Alan Formation); (iii) a Paleogene to Neogene post-platform megasequence (Raša Formation); and (iv) a Neogene to Quaternary (Pliocene to Holocene) megasequence (Istra and Ivana Formations). A number of organic-rich intervals with source rock potential have been identified on- and offshore Croatia: Middle and Upper Carboniferous, Upper Permian, Lower and Middle Triassic, Lower and Upper Jurassic, Lower and Upper Cretaceous, Eocene, and Pliocene – Pleistocene. Traps and potential plays have been identified from seismic data in the Dinaric belt and adjacent foreland. Evaporites of Permian, Triassic and Neogene (Messinian) ages form potential regional seals, and carbonates with secondary porosity form potential reservoirs. Oil and gas shows in wells in the Croatian part of the Adriatic Basin have been recorded but no oil accumulations of commercial value have yet been discovered. In the northern Adriatic offshore Croatia, Pliocene hemi-pelagic marlstones and shales include source rocks which produce commercial volumes of biogenic gas. The gas is reservoired in unconsolidated sands of the Pleistocene Ivana Formation.

Description: Summary: Environmental stress can influence species traits and performance considerably. Using a seaweed-snail system from NW (Nova Scotia) and NE (Helgoland) Atlantic rocky shores, we examined how physical stress (wave exposure) modulates traits in the seaweed Fucus vesiculosus and indirectly in its main consumer, the periwinkle Littorina obtusata. In both regions, algal tissue toughness increased with wave exposure. Reciprocal-transplant experiments showed that tissue toughness adjusted plastically to the prevailing level of wave exposure. Choice experiments tested the feeding preference of snails from sheltered, exposed and very exposed habitats for algae from such wave exposures. Snails from exposed and very exposed habitats consumed algal tissues at similar rates irrespective of the exposure of origin of the algae. However, snails from sheltered habitats consumed less algal tissues from very exposed habitats than tissues from sheltered and exposed habitats. Choice assays using reconstituted algal food (triturated during preparation) identified high thallus toughness as the explanation for the low preference of snails from sheltered habitats for algae from very exposed habitats. Ultrastructural analyses of radulae indicated that rachidian teeth were longest and the number of cusps in lateral teeth (grazing-relevant traits) was highest in snails from very exposed habitats, suggesting that radulae are best suited to rupture tough algal tissues in such snails. No-choice feeding experiments revealed that these radular traits were also phenotypically plastic, as they adjusted to the toughness of the algal food. Synthesis. This study indicates that the observed plasticity in the feeding ability of snails is mediated by wave exposure through phenotypic plasticity in the tissue toughness of algae. Thus, plasticity in consumers and their resource species may reduce the potential effects of physical stress on their interaction. Experiments revealed that environmental stress (wave exposure) modulated a structural seaweed trait (thallus toughness) and, indirectly, feeding-relevant traits (radular morphology) in the seaweed's main consumer (snail), enabling snails to maintain consumption efficacy across the observed range in seaweed toughness. Thus, plasticity in consumers and their resource species may reduce the potential effects of physical stress on their interaction.

Description: The age of the subducting Nazca Plate off Chile increases northward from 0 Ma at the Chile Triple Junction (46°S) to 37 Ma at the latitude of Valparaíso (32°S). Age-related variations in the thermal state of the subducting plate impact on (a) the water influx to the subduction zone, as well as on (b) the volumes of water that are released under the continental fore arc or, alternatively, carried beyond the arc. Southern Central Chile is an ideal setting to study this effect, because other factors for the subduction zone water budget appear constant. We determine the water influx by calculating the crustal water uptake and by modeling the upper mantle serpentinization at the outer rise of the Chile Trench. The water release under fore arc and arc is determined by coupling FEM thermal models of the subducting plate with stability fields of water-releasing mineral reactions for upper and lower crust and hydrated mantle. Results show that both the influx of water stored in, and the outflux of water released from upper crust, lower crust, and mantle vary drastically over segment boundaries. In particular, the oldest and coldest segments carry roughly twice as much water into the subduction zone as the youngest and hottest segments, but their release flux to the fore arc is only about one fourth of the latter. This high variability over a subduction zone of 〈1500 km length shows that it is insufficient to consider subduction zones as uniform entities in global estimates of subduction zone fluxes.

Description: High-resolution magnetic surveys have been acquired over the partially sedimented Palinuro massive sulfide deposits in the Aeolian volcanic arc, Tyrrhenian Sea. Surveys flown close to the seafloor using an autonomous underwater vehicle (AUV) show that the volcanic-arc-related basalt-hosted hydrothermal site is associated with zones of lower magnetization. This observation reflects the alteration of basalt affected by hydrothermal circulation and/or the progressive accumulation of a nonmagnetic deposit made of hydrothermal and volcaniclastic material and/or a thermal demagnetization of titanomagnetite due to the upwelling of hot fluids. To discriminate among these inferences, estimate the shape of the nonmagnetic deposit and the characteristics of the underlying altered area—the stockwork—we use high-resolution vector magnetic data acquired by the AUV Abyss (GEOMAR) above a crater-shaped depression hosting a weakly active hydrothermal site. Our study unveils a relatively small nonmagnetic deposit accumulated at the bottom of the depression and locked between the surrounding volcanic cones. Thermal demagnetization is unlikely but the stockwork extends beyond the limits of the nonmagnetic deposit, forming lobe-shaped zones believed to be a consequence of older volcanic episodes having contributed in generating the cones.

Description: High-resolution vector magnetic measurements were performed on five hydrothermal vent fields of the back-arc spreading region of the southern Mariana Trough using Shinkai 6500, a deep-sea manned submersible. A new 3-D forward scheme was applied that exploits the surrounding bathymetry and varying altitudes of the submersible to estimate absolute crustal magnetization. The results revealed that magnetic-anomaly-derived absolute magnetizations show a reasonable correlation with natural remanent magnetizations of rock samples collected from the seafloor of the same region. The distribution of magnetic-anomaly-derived absolute magnetization suggests that all five andesite-hosted hydrothermal fields are associated with a lack of magnetization, as is generally observed at basalt-hosted hydrothermal sites. Furthermore, both the Pika and Urashima sites were found to have their own distinct low-magnetization zones, which could not be distinguished in magnetic anomaly data collected at higher altitudes by autonomous underwater vehicle due to their limited extension. The spatial extent of the resulting low magnetization is approximately 10 times wider at off-axis sites than at on-axis sites, possibly reflecting larger accumulations of nonmagnetic sulfides, stockwork zones, and/or alteration zones at the off-axis sites.

Description: The cause of massive blooms of Ethmodiscus rex laminated diatom mats (LDMs) in the eastern Philippine Sea (EPS) during the Last Glacial Maximum (LGM) remains uncertain. In order to better understand the mechanism of formation of E. rex LDMs from the perspective of dissolved silicon (DSi) utilization, we determined the silicon isotopic composition of single E. rex diatom frustules (δ30SiE. rex) from two sediment cores in the Parece Vela Basin of the EPS. In the study cores, δ30SiE. rex varies from −1.23‰ to −0.83‰ (average −1.04‰), a range that is atypical of marine diatom δ30Si and that corresponds to the lower limit of reported diatom δ30Si values of any age. A binary mixing model (upwelled silicon versus eolian silicon) accounting for silicon isotopic fractionation during DSi uptake by diatoms was constructed. The binary mixing model demonstrates that E. rex dominantly utilized DSi from eolian sources (i.e., Asian dust) with only minor contributions from upwelled seawater sources (i.e., advected from Subantarctic Mode Water, Antarctic Intermediate Water, or North Pacific Intermediate Water). E. rex utilized only ~24% of available DSi, indicating that surface waters of the EPS were eutrophic with respect to silicon during the LGM. Our results suggest that giant diatoms did not always use a buoyancy strategy to obtain nutrients from the deep nutrient pool, thus revising previously proposed models for the formation of E. rex LDMs.

Description: We use surface air temperature to evaluate the decadal forecast skill of the fully coupled Max Planck Institut Earth System Model (MPI-ESM) initialized using only surface wind stress applied to the ocean component of the model (Modini: Model initialization by partially coupled spin-up). Our analysis shows that the greenhouse gas forcing alone results in a significant forecast skill on the 2–5 and 6–9 year range even for uninitialized hindcasts. For the first forecast year, the forecast skill of Modini is generally comparable with previous initialization procedures applied to MPI-ESM. But only Modini is able to generate a significant skill (correlation) in the tropical Pacific for a 2–5 year (and to a lesser extent for a 6–9 year) hindcast. Modini is also better able to capture the observed hiatus in global warming in hindcast mode than the other methods. Finally, we present forecasts for 2015 and the average of years 2016–2019 and 2020–2024, predicting an end to the hiatus.

Description: Ocean–atmosphere interactions play a key role in climate variability on a wide range of time scales from seasonal to decadal and longer. The extratropical oceans are thought to exert noticeable feedbacks on the atmosphere especially on decadal and longer time scales, yet the large-scale atmospheric response to anomalous extratropical sea surface temperature (SST) is still under debate. Here we show, by means of dedicated high-resolution atmospheric model experiments, that sufficient daily variability in the extratropical background SST needs to be resolved to force a statistically significant large-scale atmospheric response to decadal North Pacific SST anomalies associated with the Pacific Decadal Oscillation (PDO), which is consistent with observations. The large-scale response is mediated by atmospheric eddies. This implies that daily extratropical SST fluctuations must be simulated by the ocean components and resolved by the atmospheric components of global climate models to enable realistic simulation of decadal North Pacific sector climate variability.

Description: The source mantle of the basaltic ocean crust on the western half of the Pacific Plate was examined using Pb–Nd–Hf isotopes. The results showed that the subducted Izanagi–Pacific Ridge (IPR) formed from both Pacific (180–∼80 Ma) and Indian (∼80–70 Ma) mantles. The western Pacific Plate becomes younger westward and is thought to have formed from the IPR. The ridge was subducted along the Kurile–Japan–Nankai–Ryukyu (KJNR) Trench at 60–55 Ma and leading edge of the Pacific Plate is currently stagnated in the mantle transition zone. Conversely, the entire eastern half of the Pacific Plate, formed from isotopically distinct Pacific mantle along the East Pacific Rise and the Juan de Fuca Ridge, largely remains on the seafloor. The subducted IPR is inaccessible; therefore, questions regarding which mantle might be responsible for the formation of the western half of the Pacific Plate remain controversial. Knowing the source of the IPR basalts provides insight into the Indian–Pacific mantle boundary before the Cenozoic. Isotopic compositions of the basalts from borehole cores (165–130 Ma) in the western Pacific show that the surface oceanic crust is of Pacific mantle origin. However, the accreted ocean floor basalts (∼80–70 Ma) in the accretionary prism along the KJNR Trench have Indian mantle signatures. This indicates the younger western Pacific Plate of IPR origin formed partly from Indian mantle and that the Indian–Pacific mantle boundary has been stationary in the western Pacific at least since the Cretaceous.

Description: A global ocean model with 1/12∘ horizontal resolution is used to assess the seasonal cycle of surface Eddy Kinetic Energy (EKE). The model reproduces the salient features of the observed mean surface EKE, including amplitude and phase of its seasonal cycle in most parts of the ocean. In all subtropical gyres of the Pacific and Atlantic, EKE peaks in summer down to a depth of ∼350 m, below which the seasonal cycle is weak. Investigation of the possible driving mechanisms reveals the seasonal changes in the thermal interactions with the atmosphere to be the most likely cause of the summer maximum of EKE. The development of the seasonal thermocline in spring and summer is accompanied by stronger mesoscale variations in the horizontal temperature gradients near the surface which corresponds, by thermal wind balance, to an intensification of mesoscale velocity anomalies towards the surface.

Description: The timing of initiation of human impacts on the global climate system is actively debated. Anthropogenic effects on the global climate system are evident since the Industrial Revolution, but humans may have altered biomass burning, and hence the climate system, for millennia. We use the specific biomarker levoglucosan to produce the first high-temporal resolution hemispheric reconstruction of Holocene fire emissions inferred from ice core analyses. Levoglucosan recorded in the Greenland North Greenland Eemian ice core significantly increases since the last glacial, resulting in a maximum around ~2.5 ka and then decreasing until the present. Here we demonstrate that global climate drivers fail to explain late Holocene biomass burning variations and that the levoglucosan maximum centered on ~2.5 ka may be due to anthropogenic land clearance.

Description: The West Spitsbergen Current, which flows northward along the western Svalbard continental slope, transports warm and saline Atlantic water (AW) into the Arctic Ocean. A combined analysis of highresolution seismic images and hydrographic sections across this current has uncovered the oceanographic processes involved in horizontal and vertical mixing of AW. At the shelf break, where a strong horizontal temperature gradient exists east of the warmest AW, isopycnal interleaving of warm AW and surrounding colder waters is observed. Strong seismic reflections characterize these interleaving features, with a negative polarity reflection arising from an interface of warm water overlying colder water. A seismic-derived sound speed image reveals the extent and lateral continuity of such interleaving layers. There is evidence of obliquely aligned internal waves emanating from the slope at 450–500 m. They follow the predicted trajectory of internal S2 tidal waves and can promote vertical mixing between Atlantic and Arctic-origin waters.

Description: International Workshop: Applications and Perspectives of Cavity Enhanced Optical Detection Techniques in Ocean Sciences; Kiel, Germany, 20–21 April 2015