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  • 1
    Publication Date: 2018-12-20
    Description: Carbon Footprint of two different type fuel production systems, made of/from used cooking oil, i.e., Strait Vegetable Oil (SVO) and Bio Diesel Fuel (BDF), resulted a substantial GHG emission credit on SVO, -3.45 kg CO 2 e, compared with that of BDF, -2.95 kg CO 2 e, predominantly due to the emissions derived from methanol and electricity used in the BDF production. The cost analyses also favoured the SVO system at 82 JPY credit if steam use was excluded, approximately 27 JPY advantageous than the BDF system, due to the extra costs of methanol, electricity and absorbent used in the BDF production.
    Print ISSN: 1755-1307
    Electronic ISSN: 1755-1315
    Topics: Geography , Geosciences , Physics
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  • 2
    Publication Date: 2008-02-22
    Description: The human APOBEC3G (apolipoprotein B messenger-RNA-editing enzyme, catalytic polypeptide-like 3G) protein is a single-strand DNA deaminase that inhibits the replication of human immunodeficiency virus-1 (HIV-1), other retroviruses and retrotransposons. APOBEC3G anti-viral activity is circumvented by most retroelements, such as through degradation by HIV-1 Vif. APOBEC3G is a member of a family of polynucleotide cytosine deaminases, several of which also target distinct physiological substrates. For instance, APOBEC1 edits APOB mRNA and AID deaminates antibody gene DNA. Although structures of other family members exist, none of these proteins has elicited polynucleotide cytosine deaminase or anti-viral activity. Here we report a solution structure of the human APOBEC3G catalytic domain. Five alpha-helices, including two that form the zinc-coordinating active site, are arranged over a hydrophobic platform consisting of five beta-strands. NMR DNA titration experiments, computational modelling, phylogenetic conservation and Escherichia coli-based activity assays combine to suggest a DNA-binding model in which a brim of positively charged residues positions the target cytosine for catalysis. The structure of the APOBEC3G catalytic domain will help us to understand functions of other family members and interactions that occur with pathogenic proteins such as HIV-1 Vif.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Chen, Kuan-Ming -- Harjes, Elena -- Gross, Phillip J -- Fahmy, Amr -- Lu, Yongjian -- Shindo, Keisuke -- Harris, Reuben S -- Matsuo, Hiroshi -- R21 AI073167/AI/NIAID NIH HHS/ -- England -- Nature. 2008 Mar 6;452(7183):116-9. doi: 10.1038/nature06638. Epub 2008 Feb 20.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biochemistry, Molecular Biology and Biophysics, [of Minnesota, Minneapolis, Minnesota 55455, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/18288108" target="_blank"〉PubMed〈/a〉
    Keywords: Binding Sites ; Catalysis ; *Catalytic Domain ; Cytidine Deaminase/*chemistry/genetics/*metabolism ; DNA, Single-Stranded/chemistry/metabolism ; DNA-Binding Proteins/chemistry/genetics/metabolism ; HIV-1/*physiology ; Humans ; Hydrophobic and Hydrophilic Interactions ; Models, Molecular ; *Nuclear Magnetic Resonance, Biomolecular ; Protein Structure, Secondary ; Zinc/metabolism
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 3
    Publication Date: 1991-04-05
    Description: The natriuretic peptides are hormones that can stimulate natriuretic, diuretic, and vasorelaxant activity in vivo, presumably through the activation of two known cell surface receptor guanylyl cyclases (ANPR-A and ANPR-B). Although atrial natriuretic peptide (ANP) and, to a lesser extent, brain natriuretic peptide (BNP) are efficient activators of the ANPR-A guanylyl cyclase, neither hormone can significantly stimulate ANPR-B. A member of this hormone family, C-type natriuretic peptide (CNP), potently and selectively activated the human ANPR-B guanylyl cyclase. CNP does not increase guanosine 3',5'-monophosphate accumulation in cells expressing human ANPR-A. The affinity of CNP for ANPR-B is 50- or 500-fold higher than ANP or BNP, respectively. This ligand-receptor pair may be involved in the regulation of fluid homeostasis by the central nervous system.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Koller, K J -- Lowe, D G -- Bennett, G L -- Minamino, N -- Kangawa, K -- Matsuo, H -- Goeddel, D V -- New York, N.Y. -- Science. 1991 Apr 5;252(5002):120-3.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Molecular Biology, Genentech, Inc., South San Francisco 94080.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/1672777" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Atrial Natriuretic Factor/*physiology ; Cells, Cultured ; Cercopithecus aethiops ; Cloning, Molecular ; Dose-Response Relationship, Drug ; Guanylate Cyclase/metabolism ; Humans ; Natriuretic Peptide, Brain ; Natriuretic Peptide, C-Type ; Nerve Tissue Proteins/*pharmacology ; Receptors, Atrial Natriuretic Factor ; Receptors, Cell Surface/*physiology ; Recombinant Proteins ; Signal Transduction
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 4
    Publication Date: 2004-01-24
    Description: What are the components that control the assembly of subcellular organelles in eukaryotic cells? Although membranes can clearly be distorted by cytosolic factors, very little is known about the intrinsic mechanisms that control the biogenesis, shape, and organization of organellar membranes. Here, we found that the unconventional phospholipid lysobisphosphatidic acid (LBPA) could induce the formation of multivesicular liposomes that resembled the multivesicular endosomes that exist where this lipid is found in vivo. This process depended on the same pH gradient that exists across endosome membranes in vivo and was selectively controlled by Alix. In turn, Alix regulated the organization of LBPA-containing endosomes in vivo.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Matsuo, Hirotami -- Chevallier, Julien -- Mayran, Nathalie -- Le Blanc, Isabelle -- Ferguson, Charles -- Faure, Julien -- Blanc, Nathalie Sartori -- Matile, Stefan -- Dubochet, Jacques -- Sadoul, Remy -- Parton, Robert G -- Vilbois, Francis -- Gruenberg, Jean -- New York, N.Y. -- Science. 2004 Jan 23;303(5657):531-4.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biochemistry, University of Geneva, 30 quai Ernest Ansermet, 1211 Geneva 4, Switzerland.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/14739459" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Annexin A2/metabolism ; Arylsulfonates/metabolism ; Calcium-Binding Proteins/genetics/*metabolism ; Carrier Proteins/genetics/*metabolism ; Cell Cycle Proteins ; Cell Line ; Coloring Agents/metabolism ; Cytosol/metabolism ; Endocytosis ; Endosomal Sorting Complexes Required for Transport ; Endosomes/*metabolism/ultrastructure ; HeLa Cells ; Humans ; Hydrogen-Ion Concentration ; Lipid Bilayers ; Liposomes/*metabolism ; Lysophospholipids/chemistry/*metabolism ; Membrane Glycoproteins/metabolism ; Molecular Structure ; Monoglycerides ; RNA Interference ; RNA, Small Interfering/metabolism ; Vesicular stomatitis Indiana virus/physiology ; Viral Envelope Proteins/metabolism
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 5
    Publication Date: 2018-06-15
    Description: Memories are integrated into interconnected networks; nevertheless, each memory has its own identity. How the brain defines specific memory identity out of intermingled memories stored in a shared cell ensemble has remained elusive. We found that after complete retrograde amnesia of auditory fear conditioning in mice, optogenetic stimulation of the auditory inputs to the lateral amygdala failed to induce memory recall, implying that the memory engram no longer existed in that circuit. Complete amnesia of a given fear memory did not affect another linked fear memory encoded in the shared ensemble. Optogenetic potentiation or depotentiation of the plasticity at synapses specific to one memory affected the recall of only that memory. Thus, the sharing of engram cells underlies the linkage between memories, whereas synapse-specific plasticity guarantees the identity and storage of individual memories.
    Keywords: Neuroscience
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 6
    Publication Date: 2018-07-19
    Description: The structure of crystalline [60]fullerene with a lithium cation inside (Li + @C 60 ) was determined by synchrotron radiation X-ray diffraction measurements to understand the electrostatic and thermal properties of the encapsulated Li + cation. Although the C 60 cages show severe orientation disorder in [Li + @C 60 ](TFPB – )·C 4 H 10 O and [Li + @C 60 ](TFSI – )·CH 2 Cl 2 , the Li + cations are rather ordered at specific positions by electrostatic interactions with coordinated anions outside the C 60 cage. The Li + @C 60 molecules in [Li + @C 60 ](ClO 4 – ) with a rock-salt-type cubic structure are fully disordered with almost uniform spherical shell charge densities even at 100 K by octahedral coordination of ClO 4 – tetrahedra and show no orientation ordering, unlike [Li + @C 60 ](PF 6 – ) and pristine C 60 . Single-bonded (Li + @C 60 – ) 2 dimers in [Li + @C 60 – ](NiOEP)⋅CH 2 Cl 2 are thermally stable even at 400 K and form Li + –C bonds which are shorter than Li + –C bonds in [Li + @C 60 ](PF 6 – ) and suppress the rotational motion of the Li + cations.
    Keywords: materials science
    Electronic ISSN: 2054-5703
    Topics: Natural Sciences in General
    Published by Royal Society
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  • 7
    Publication Date: 1987-06-01
    Print ISSN: 0038-1098
    Electronic ISSN: 1879-2766
    Topics: Physics
    Published by Elsevier
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  • 8
    Publication Date: 1986-05-01
    Print ISSN: 0038-1098
    Electronic ISSN: 1879-2766
    Topics: Physics
    Published by Elsevier
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  • 9
    Publication Date: 1986-05-01
    Print ISSN: 0038-1098
    Electronic ISSN: 1879-2766
    Topics: Physics
    Published by Elsevier
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  • 10
    Publication Date: 1983-05-01
    Print ISSN: 0038-1098
    Electronic ISSN: 1879-2766
    Topics: Physics
    Published by Elsevier
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