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  • 1
    Publication Date: 2008-03-28
    Description: The retinotectal projection has long been studied experimentally and theoretically, as a model for the formation of topographic brain maps. Neighbouring retinal ganglion cells (RGCs) project their axons to neighbouring positions in the optic tectum, thus re-establishing a continuous neural representation of visual space. Mapping along this axis requires chemorepellent signalling from tectal cells, expressing ephrin-A ligands, to retinal growth cones, expressing EphA receptors. High concentrations of ephrin A, increasing from anterior to posterior, prevent temporal axons from invading the posterior tectum. However, the force that drives nasal axons to extend past the anterior tectum and terminate in posterior regions remains to be identified. We tested whether axon-axon interactions, such as competition, are required for posterior tectum innervation. By transplanting blastomeres from a wild-type (WT) zebrafish into a lakritz (lak) mutant, which lacks all RGCs, we created chimaeras with eyes that contained single RGCs. These solitary RGCs often extended axons into the tectum, where they branched to form a terminal arbor. Here we show that the distal tips of these arbors were positioned at retinotopically appropriate positions, ruling out an essential role for competition in innervation of the ephrin-A-rich posterior tectum. However, solitary arbors were larger and more complex than under normal, crowded conditions, owing to a lack of pruning of proximal branches during refinement of the retinotectal projection. We conclude that dense innervation is not required for targeting of retinal axons within the zebrafish tectum but serves to restrict arbor size and shape.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2885002/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2885002/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Gosse, Nathan J -- Nevin, Linda M -- Baier, Herwig -- R01 EY012406/EY/NEI NIH HHS/ -- R01 EY012406-06A2/EY/NEI NIH HHS/ -- R01 EY012406-07/EY/NEI NIH HHS/ -- R01 EY012406-08/EY/NEI NIH HHS/ -- R01 EY012406-09/EY/NEI NIH HHS/ -- R01 EY013855/EY/NEI NIH HHS/ -- R01 EY013855-01A1/EY/NEI NIH HHS/ -- R01 EY013855-02/EY/NEI NIH HHS/ -- R01 EY013855-03/EY/NEI NIH HHS/ -- R01 EY013855-04/EY/NEI NIH HHS/ -- R01 EY013855-05/EY/NEI NIH HHS/ -- R01 EY013855-06/EY/NEI NIH HHS/ -- R01 EY013855-07/EY/NEI NIH HHS/ -- R01 EY013855-08/EY/NEI NIH HHS/ -- England -- Nature. 2008 Apr 17;452(7189):892-5. doi: 10.1038/nature06816. Epub 2008 Mar 26.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Program in Developmental Biology, University of California, San Francisco, Department of Physiology, 1550 Fourth Street, San Francisco, California 94158-2324, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/18368050" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Axons/*physiology ; DNA-Binding Proteins/genetics/metabolism ; Models, Neurological ; Retinal Ganglion Cells/*cytology/*physiology ; Superior Colliculi/*cytology/*physiology ; Zebrafish/*physiology ; Zebrafish Proteins/genetics/metabolism
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 2
    Publication Date: 2008-10-17
    Description: The ability to process temporal information is fundamental to sensory perception, cognitive processing and motor behaviour of all living organisms, from amoebae to humans. Neural circuit mechanisms based on neuronal and synaptic properties have been shown to process temporal information over the range of tens of microseconds to hundreds of milliseconds. How neural circuits process temporal information in the range of seconds to minutes is much less understood. Studies of working memory in monkeys and rats have shown that neurons in the prefrontal cortex, the parietal cortex and the thalamus exhibit ramping activities that linearly correlate with the lapse of time until the end of a specific time interval of several seconds that the animal is trained to memorize. Many organisms can also memorize the time interval of rhythmic sensory stimuli in the timescale of seconds and can coordinate motor behaviour accordingly, for example, by keeping the rhythm after exposure to the beat of music. Here we report a form of rhythmic activity among specific neuronal ensembles in the zebrafish optic tectum, which retains the memory of the time interval (in the order of seconds) of repetitive sensory stimuli for a duration of up to approximately 20 s. After repetitive visual conditioning stimulation (CS) of zebrafish larvae, we observed rhythmic post-CS activities among specific tectal neuronal ensembles, with a regular interval that closely matched the CS. Visuomotor behaviour of the zebrafish larvae also showed regular post-CS repetitions at the entrained time interval that correlated with rhythmic neuronal ensemble activities in the tectum. Thus, rhythmic activities among specific neuronal ensembles may act as an adjustable 'metronome' for time intervals in the order of seconds, and serve as a mechanism for the short-term perceptual memory of rhythmic sensory experience.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2896960/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2896960/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Sumbre, German -- Muto, Akira -- Baier, Herwig -- Poo, Mu-ming -- R01 EY012406/EY/NEI NIH HHS/ -- R01 EY012406-01/EY/NEI NIH HHS/ -- R01 EY012406-02/EY/NEI NIH HHS/ -- R01 EY012406-03/EY/NEI NIH HHS/ -- R01 EY012406-04/EY/NEI NIH HHS/ -- R01 EY012406-05/EY/NEI NIH HHS/ -- R01 EY012406-06A2/EY/NEI NIH HHS/ -- R01 EY012406-07/EY/NEI NIH HHS/ -- R01 EY012406-08/EY/NEI NIH HHS/ -- R01 EY012406-09/EY/NEI NIH HHS/ -- R01 NS053358/NS/NINDS NIH HHS/ -- R01 NS053358-01A2/NS/NINDS NIH HHS/ -- R01 NS053358-02/NS/NINDS NIH HHS/ -- R01 NS053358-02S1/NS/NINDS NIH HHS/ -- R01 NS053358-03/NS/NINDS NIH HHS/ -- R01 NS053358-04/NS/NINDS NIH HHS/ -- England -- Nature. 2008 Nov 6;456(7218):102-6. doi: 10.1038/nature07351. Epub 2008 Oct 15.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Division of Neurobiology, Department of Molecular and Cell Biology, Helen Wills Neuroscience Institute, University of California, Berkeley, California 94720, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/18923391" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Calcium/metabolism ; Conditioning (Psychology) ; Larva/physiology ; Memory/*physiology ; Neurons/*physiology ; *Periodicity ; Photic Stimulation ; Superior Colliculi/cytology/physiology ; Swimming/physiology ; Tail/physiology ; Time Factors ; Zebrafish/embryology/growth & development/*physiology
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 3
    Publication Date: 2009-09-18
    Description: Locomotion relies on neural networks called central pattern generators (CPGs) that generate periodic motor commands for rhythmic movements. In vertebrates, the excitatory synaptic drive for inducing the spinal CPG can originate from either supraspinal glutamatergic inputs or from within the spinal cord. Here we identify a spinal input to the CPG that drives spontaneous locomotion using a combination of intersectional gene expression and optogenetics in zebrafish larvae. The photo-stimulation of one specific cell type was sufficient to induce a symmetrical tail beating sequence that mimics spontaneous slow forward swimming. This neuron is the Kolmer-Agduhr cell, which extends cilia into the central cerebrospinal-fluid-containing canal of the spinal cord and has an ipsilateral ascending axon that terminates in a series of consecutive segments. Genetically silencing Kolmer-Agduhr cells reduced the frequency of spontaneous free swimming, indicating that activity of Kolmer-Agduhr cells provides necessary tone for spontaneous forward swimming. Kolmer-Agduhr cells have been known for over 75 years, but their function has been mysterious. Our results reveal that during early development in zebrafish these cells provide a positive drive to the spinal CPG for spontaneous locomotion.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2770190/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2770190/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Wyart, Claire -- Del Bene, Filippo -- Warp, Erica -- Scott, Ethan K -- Trauner, Dirk -- Baier, Herwig -- Isacoff, Ehud Y -- 5PN2EY018241/EY/NEI NIH HHS/ -- R01 NS035549/NS/NINDS NIH HHS/ -- R01 NS035549-12/NS/NINDS NIH HHS/ -- R01 NS053358/NS/NINDS NIH HHS/ -- England -- Nature. 2009 Sep 17;461(7262):407-10. doi: 10.1038/nature08323.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Helen Wills Neuroscience Institute and Department of Molecular and Cell Biology, University of California in Berkeley, Berkeley, California 94720, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/19759620" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Animals, Genetically Modified ; Axons/physiology ; Cilia/physiology ; Female ; Larva/genetics/physiology/radiation effects ; *Light ; Locomotion/genetics/*physiology/radiation effects ; Male ; Models, Neurological ; Neurons/physiology/radiation effects ; Spinal Cord/cytology/*physiology/radiation effects ; Swimming/physiology ; Tail/physiology ; Zebrafish/embryology/*genetics/growth & development/*physiology
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 4
    Publication Date: 2010-11-13
    Description: The cardiac pacemaker controls the rhythmicity of heart contractions and can be substituted by a battery-operated device as a last resort. We created a genetically encoded, optically controlled pacemaker by expressing halorhodopsin and channelrhodopsin in zebrafish cardiomyocytes. Using patterned illumination in a selective plane illumination microscope, we located the pacemaker and simulated tachycardia, bradycardia, atrioventricular blocks, and cardiac arrest. The pacemaker converges to the sinoatrial region during development and comprises fewer than a dozen cells by the time the heart loops. Perturbation of the activity of these cells was entirely reversible, demonstrating the resilience of the endogenous pacemaker. Our studies combine optogenetics and light-sheet microscopy to reveal the emergence of organ function during development.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Arrenberg, Aristides B -- Stainier, Didier Y R -- Baier, Herwig -- Huisken, Jan -- HL54737/HL/NHLBI NIH HHS/ -- R01 NS053358/NS/NINDS NIH HHS/ -- New York, N.Y. -- Science. 2010 Nov 12;330(6006):971-4. doi: 10.1126/science.1195929.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Physiology, University of California, San Francisco, CA 94158, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21071670" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Animals, Genetically Modified ; Atrioventricular Block/physiopathology ; Bradycardia/physiopathology ; Embryo, Nonmammalian/physiology ; Embryonic Development ; Halorhodopsins/genetics/metabolism ; Heart/embryology/growth & development/*physiology ; Heart Arrest/physiopathology ; Heart Conduction System/cytology/embryology/*physiology ; *Heart Rate ; Light ; Myocardial Contraction ; Myocytes, Cardiac/metabolism ; Rhodopsin/genetics/metabolism ; Sinoatrial Node/cytology/*physiology ; Tachycardia/physiopathology ; Zebrafish/embryology/genetics/growth & development/*physiology
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 5
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 1992-01-24
    Description: Spatial gradients of axon guiding molecules have long been suspected to provide positional and directional cues for retinal ganglion cell axons growing within the optic tectum. With the identification of a guiding activity from tectal cell membranes, it has become possible to investigate the potential physiological significance of molecular gradients for retinal growth cone behavior in vitro. A subset of retinal growth cones, those from the temporal half, were highly sensitive to small concentration changes of the guiding component. The degree of response was correlated with the strength of the gradient. These findings demonstrate that the neural growth cone can read gradients of surface-associated information.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Baier, H -- Bonhoeffer, F -- New York, N.Y. -- Science. 1992 Jan 24;255(5043):472-5.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Max-Planck-Institut fur Entwicklungsbiologie, Abteilung Physikalische Biologie, Tubingen, Germany.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/1734526" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Axons/*physiology ; Cell Membrane/physiology ; Chick Embryo ; Culture Techniques ; Retina/*cytology ; Superior Colliculi/*physiology/ultrastructure ; Visual Pathways/*cytology/embryology
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 6
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 1994-09-09
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Baier, H -- Bonhoeffer, F -- New York, N.Y. -- Science. 1994 Sep 9;265(5178):1541-2.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Max-Planck-Institut fur Entwicklungsbiologie, Tubingen, Germany.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/8079167" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Axons/*physiology ; Caenorhabditis elegans ; *Caenorhabditis elegans Proteins ; Cell Movement ; Chick Embryo ; Cloning, Molecular ; Helminth Proteins/genetics/metabolism ; Nerve Growth Factors/chemistry/genetics/*physiology ; *Nerve Tissue Proteins ; Rats ; Tumor Suppressor Proteins
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 7
    Publication Date: 2010-10-30
    Description: The optic tectum of zebrafish is involved in behavioral responses that require the detection of small objects. The superficial layers of the tectal neuropil receive input from retinal axons, while its deeper layers convey the processed information to premotor areas. Imaging with a genetically encoded calcium indicator revealed that the deep layers, as well as the dendrites of single tectal neurons, are preferentially activated by small visual stimuli. This spatial filtering relies on GABAergic interneurons (using the neurotransmitter gamma-aminobutyric acid) that are located in the superficial input layer and respond only to large visual stimuli. Photo-ablation of these cells with KillerRed, or silencing of their synaptic transmission, eliminates the size tuning of deeper layers and impairs the capture of prey.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3243732/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3243732/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Del Bene, Filippo -- Wyart, Claire -- Robles, Estuardo -- Tran, Amanda -- Looger, Loren -- Scott, Ethan K -- Isacoff, Ehud Y -- Baier, Herwig -- PN2 EY018241/EY/NEI NIH HHS/ -- R01 EY012406/EY/NEI NIH HHS/ -- R01 EY012406-06A2/EY/NEI NIH HHS/ -- R01 EY012406-07/EY/NEI NIH HHS/ -- R01 EY012406-08/EY/NEI NIH HHS/ -- R01 EY012406-09/EY/NEI NIH HHS/ -- R01 MH060711/MH/NIMH NIH HHS/ -- R01 NS050833/NS/NINDS NIH HHS/ -- R01 NS053358/NS/NINDS NIH HHS/ -- R01 NS053358-01A2/NS/NINDS NIH HHS/ -- R01 NS053358-02/NS/NINDS NIH HHS/ -- R01 NS053358-02S1/NS/NINDS NIH HHS/ -- R01 NS053358-03/NS/NINDS NIH HHS/ -- R01 NS053358-04/NS/NINDS NIH HHS/ -- Howard Hughes Medical Institute/ -- New York, N.Y. -- Science. 2010 Oct 29;330(6004):669-73. doi: 10.1126/science.1192949.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Physiology, University of California, San Francisco, CA 94158, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21030657" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Animals, Genetically Modified ; Axons/physiology ; Bicuculline/pharmacology ; Dendrites/physiology ; GABA Antagonists/pharmacology ; Interneurons/*physiology ; Neural Inhibition ; Neurons/*physiology ; Neuropil/physiology ; Optic Lobe, Nonmammalian/cytology/*physiology ; Photic Stimulation ; Retina/*physiology ; Retinal Neurons/physiology ; Synaptic Transmission ; Visual Pathways/*physiology ; *Visual Perception ; Zebrafish ; gamma-Aminobutyric Acid/metabolism
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 8
    Publication Date: 2009-01-21
    Print ISSN: 0027-8424
    Electronic ISSN: 1091-6490
    Topics: Biology , Medicine , Natural Sciences in General
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  • 9
    Publication Date: 2001-03-26
    Print ISSN: 0163-1829
    Electronic ISSN: 1095-3795
    Topics: Physics
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  • 10
    Publication Date: 1994-11-22
    Print ISSN: 0027-8424
    Electronic ISSN: 1091-6490
    Topics: Biology , Medicine , Natural Sciences in General
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