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  • 1
    Publication Date: 2013-12-18
    Description: How biological systems generate reproducible patterns with high precision is a central question in science. The shoot apical meristem (SAM), a specialized tissue producing plant aerial organs, is a developmental system of choice to address this question. Organs are periodically initiated at the SAM at specific spatial positions and this spatiotemporal pattern defines phyllotaxis. Accumulation of the plant hormone auxin triggers organ initiation, whereas auxin depletion around organs generates inhibitory fields that are thought to be sufficient to maintain these patterns and their dynamics. Here we show that another type of hormone-based inhibitory fields, generated directly downstream of auxin by intercellular movement of the cytokinin signalling inhibitor ARABIDOPSIS HISTIDINE PHOSPHOTRANSFER PROTEIN 6 (AHP6), is involved in regulating phyllotactic patterns. We demonstrate that AHP6-based fields establish patterns of cytokinin signalling in the meristem that contribute to the robustness of phyllotaxis by imposing a temporal sequence on organ initiation. Our findings indicate that not one but two distinct hormone-based fields may be required for achieving temporal precision during formation of reiterative structures at the SAM, thus indicating an original mechanism for providing robustness to a dynamic developmental system.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Besnard, Fabrice -- Refahi, Yassin -- Morin, Valerie -- Marteaux, Benjamin -- Brunoud, Geraldine -- Chambrier, Pierre -- Rozier, Frederique -- Mirabet, Vincent -- Legrand, Jonathan -- Laine, Stephanie -- Thevenon, Emmanuel -- Farcot, Etienne -- Cellier, Coralie -- Das, Pradeep -- Bishopp, Anthony -- Dumas, Renaud -- Parcy, Francois -- Helariutta, Yka -- Boudaoud, Arezki -- Godin, Christophe -- Traas, Jan -- Guedon, Yann -- Vernoux, Teva -- England -- Nature. 2014 Jan 16;505(7483):417-21. doi: 10.1038/nature12791. Epub 2013 Dec 15.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉1] Laboratoire de Reproduction et Developpement des Plantes, CNRS, INRA, ENS Lyon, UCBL, Universite de Lyon, 69364 Lyon, France [2] IBENS, ENS, 75005 Paris, France (F.B.); UMR CNRS 5534, Universite Claude Bernard Lyon I, Batiment Gregor Mendel, 16 rue Raphael Dubois, 69622 Villeurbanne, France (V.M.); University of Nottingham, University Park, Nottingham NG7 2RD, UK (E.F); University of Nottingham, Sutton Bonington LE12 5RD, UK (A.Bi.). ; Virtual Plants INRIA/CIRAD/INRA Project Team, UMR AGAP, Institut de Biologie Computationelle, 34095 Montpellier, France. ; 1] Laboratoire de Reproduction et Developpement des Plantes, CNRS, INRA, ENS Lyon, UCBL, Universite de Lyon, 69364 Lyon, France [2] IBENS, ENS, 75005 Paris, France (F.B.); UMR CNRS 5534, Universite Claude Bernard Lyon I, Batiment Gregor Mendel, 16 rue Raphael Dubois, 69622 Villeurbanne, France (V.M.); University of Nottingham, University Park, Nottingham NG7 2RD, UK (E.F); University of Nottingham, Sutton Bonington LE12 5RD, UK (A.Bi.). [3]. ; 1] Laboratoire de Reproduction et Developpement des Plantes, CNRS, INRA, ENS Lyon, UCBL, Universite de Lyon, 69364 Lyon, France [2]. ; Laboratoire de Reproduction et Developpement des Plantes, CNRS, INRA, ENS Lyon, UCBL, Universite de Lyon, 69364 Lyon, France. ; 1] Laboratoire de Reproduction et Developpement des Plantes, CNRS, INRA, ENS Lyon, UCBL, Universite de Lyon, 69364 Lyon, France [2] Laboratoire Joliot-Curie, CNRS, ENS Lyon, Universite de Lyon, 69364 Lyon, France. ; 1] Laboratoire de Reproduction et Developpement des Plantes, CNRS, INRA, ENS Lyon, UCBL, Universite de Lyon, 69364 Lyon, France [2] Virtual Plants INRIA/CIRAD/INRA Project Team, UMR AGAP, Institut de Biologie Computationelle, 34095 Montpellier, France [3] Laboratoire Joliot-Curie, CNRS, ENS Lyon, Universite de Lyon, 69364 Lyon, France. ; Laboratoire Physiologie Cellulaire et Vegetale, CEA, CNRS, INRA, UJF, 38041 Grenoble, France. ; 1] Virtual Plants INRIA/CIRAD/INRA Project Team, UMR AGAP, Institut de Biologie Computationelle, 34095 Montpellier, France [2] IBENS, ENS, 75005 Paris, France (F.B.); UMR CNRS 5534, Universite Claude Bernard Lyon I, Batiment Gregor Mendel, 16 rue Raphael Dubois, 69622 Villeurbanne, France (V.M.); University of Nottingham, University Park, Nottingham NG7 2RD, UK (E.F); University of Nottingham, Sutton Bonington LE12 5RD, UK (A.Bi.). ; 1] Institute of Biotechnology/Department of Biosciences, University of Helsinki, FIN-00014, Finland [2] IBENS, ENS, 75005 Paris, France (F.B.); UMR CNRS 5534, Universite Claude Bernard Lyon I, Batiment Gregor Mendel, 16 rue Raphael Dubois, 69622 Villeurbanne, France (V.M.); University of Nottingham, University Park, Nottingham NG7 2RD, UK (E.F); University of Nottingham, Sutton Bonington LE12 5RD, UK (A.Bi.). ; Institute of Biotechnology/Department of Biosciences, University of Helsinki, FIN-00014, Finland.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/24336201" target="_blank"〉PubMed〈/a〉
    Keywords: Arabidopsis/anatomy & histology/cytology/*growth & development/*metabolism ; Arabidopsis Proteins/*metabolism ; *Biological Transport ; Cytokinins/*antagonists & inhibitors/metabolism ; Indoleacetic Acids/metabolism ; Meristem/metabolism ; Plant Growth Regulators/antagonists & inhibitors/metabolism ; Plant Shoots/metabolism ; *Signal Transduction
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 2
    Publication Date: 2014-01-18
    Description: Transcription factors (TFs) are key players in evolution. Changes affecting their function can yield novel life forms but may also have deleterious effects. Consequently, gene duplication events that release one gene copy from selective pressure are thought to be the common mechanism by which TFs acquire new activities. Here, we show that LEAFY, a major regulator of flower development and cell division in land plants, underwent changes to its DNA binding specificity, even though plant genomes generally contain a single copy of the LEAFY gene. We examined how these changes occurred at the structural level and identify an intermediate LEAFY form in hornworts that appears to adopt all different specificities. This promiscuous intermediate could have smoothed the evolutionary transitions, thereby allowing LEAFY to evolve new binding specificities while remaining a single-copy gene.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Sayou, Camille -- Monniaux, Marie -- Nanao, Max H -- Moyroud, Edwige -- Brockington, Samuel F -- Thevenon, Emmanuel -- Chahtane, Hicham -- Warthmann, Norman -- Melkonian, Michael -- Zhang, Yong -- Wong, Gane Ka-Shu -- Weigel, Detlef -- Parcy, Francois -- Dumas, Renaud -- New York, N.Y. -- Science. 2014 Feb 7;343(6171):645-8. doi: 10.1126/science.1248229. Epub 2014 Jan 16.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉CNRS, Laboratoire de Physiologie Cellulaire et Vegetale (LPCV), UMR 5168, 38054 Grenoble, France.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/24436181" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Arabidopsis Proteins/chemistry/classification/genetics ; DNA, Plant/*chemistry ; DNA-Binding Proteins/*chemistry/classification/*genetics ; Electrophoretic Mobility Shift Assay ; *Evolution, Molecular ; Gene Dosage ; Molecular Sequence Data ; Mutation ; Phylogeny ; Plant Proteins/*chemistry/classification/*genetics ; Protein Binding/genetics ; Protein Structure, Tertiary ; Species Specificity ; Transcription Factors/chemistry/classification/genetics
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 3
    Publication Date: 2015-02-07
    Description: Brunkard et al. propose that the identification of novel LEAFY sequences contradicts our model of evolution through promiscuous intermediates. Based on the debate surrounding land plant phylogeny and on our analysis of these interesting novel sequences, we explain why there is no solid evidence to disprove our model.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Brockington, Samuel F -- Moyroud, Edwige -- Sayou, Camille -- Monniaux, Marie -- Nanao, Max H -- Thevenon, Emmanuel -- Chahtane, Hicham -- Warthmann, Norman -- Melkonian, Michael -- Zhang, Yong -- Wong, Gane Ka-Shu -- Weigel, Detlef -- Dumas, Renaud -- Parcy, Francois -- New York, N.Y. -- Science. 2015 Feb 6;347(6222):621. doi: 10.1126/science.1256011.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge CB2 3EA, UK. ; Wellcome Trust Center for Cell Biology, Michael Swann Building 5.1, King's Buildings. Edinburgh, EH9 3JR, UK. ; Department of Comparative Development and Genetics, Max Planck Institute for Plant Breeding Research, Carl-von-Linne Weg 10, 50829, Koln, Germany. ; European Molecular Biology Laboratory (EMBL), 6 Rue Jules Horowitz, BP 181, 38042 Grenoble, France. Unit of Virus Host-Cell Interactions, Universite Grenoble Alpes (UGA), Centre National de la Recherche Scientifique (CNRS), EMBL, UMI 3265, 6 Rue Jules Horowitz, 38042 Grenoble Cedex 9, France. francois.parcy@cea.fr mnanao@embl.fr. ; CNRS, Laboratoire de Physiologie Cellulaire et Vegetale (LPCV), UMR 5168, 38054 Grenoble, France. UGA, LPCV, F-38054 Grenoble, France. Commissariat a l'energie atomique et aux energies alternatives, Direction des Sciences du Vivant, Institut de Recherches en Technologies et Sciences pour le Vivant, LPCV, F-38054 Grenoble, France. Institut National de la Recherche Agronomique, LPCV, F-38054 Grenoble, France. ; Research School of Biology, The Australian National University, Acton, ACT 0200, Australia. ; Botanisches Institut, Lehrstuhl I, Universitat zu Koln, Biozentrum Koln, Zulpicher Strasse 47b, 50674 Koln, Germany. ; Beijing Genomics Institute, Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China. ; Beijing Genomics Institute, Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China Department of Biological Sciences, Department of Medicine, University of Alberta, Edmonton AB, T6G 2E9, Canada. ; Department of Molecular Biology, Max Planck Institute for Developmental Biology, 72076 Tubingen, Germany. ; CNRS, Laboratoire de Physiologie Cellulaire et Vegetale (LPCV), UMR 5168, 38054 Grenoble, France. UGA, LPCV, F-38054 Grenoble, France. Commissariat a l'energie atomique et aux energies alternatives, Direction des Sciences du Vivant, Institut de Recherches en Technologies et Sciences pour le Vivant, LPCV, F-38054 Grenoble, France. Institut National de la Recherche Agronomique, LPCV, F-38054 Grenoble, France. francois.parcy@cea.fr mnanao@embl.fr.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/25657241" target="_blank"〉PubMed〈/a〉
    Keywords: DNA, Plant/*chemistry ; DNA-Binding Proteins/*chemistry/*genetics ; *Evolution, Molecular ; Plant Proteins/*chemistry/*genetics
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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