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  • 1
    facet.materialart.
    Unknown
    Global distributions of diazotrophs abundance, biomass and nitrogen fixation rates - Gridded data product (NetCDF) - Contribution to the MAREDAT World Ocean Atlas of Plankton Functional Types (2012)
    PANGAEA
    In:  Supplement to: Luo, Yawei; Doney, Scott C; Anderson, L A; Benavides, Mar; Berman-Frank, I; Bode, Antonio; Bonnet, S; Boström, Kjärstin H; Böttjer, D; Capone, D G; Carpenter, E J; Chen, Yaw-Lin; Church, Matthew J; Dore, John E; Falcón, Luisa I; Fernández, A; Foster, R A; Furuya, Ken; Gomez, Fernando; Gundersen, Kjell; Hynes, Annette M; Karl, David Michael; Kitajima, Satoshi; Langlois, Rebecca; LaRoche, Julie; Letelier, Ricardo M; Marañón, Emilio; McGillicuddy Jr, Dennis J; Moisander, Pia H; Moore, C Mark; Mouriño-Carballido, Beatriz; Mulholland, Margaret R; Needoba, Joseph A; Orcutt, Karen M; Poulton, Alex J; Rahav, Eyal; Raimbault, Patrick; Rees, Andrew; Riemann, Lasse; Shiozaki, Takuhei; Subramaniam, Ajit; Tyrrell, Toby; Turk-Kubo, Kendra A; Varela, Manuel; Villareal, Tracy A; Webb, Eric A; White, Angelicque E; Wu, Jingfeng; Zehr, Jonathan P (2012): Database of diazotrophs in global ocean: abundance, biomass and nitrogen fixation rates. Earth System Science Data, 4, 47-73, https://doi.org/10.5194/essd-4-47-2012
    Details
    Publication Date: 2023-03-27
    Description: The MAREDAT atlas covers 11 types of plankton, ranging in size from bacteria to jellyfish. Together, these plankton groups determine the health and productivity of the global ocean and play a vital role in the global carbon cycle. Working within a uniform and consistent spatial and depth grid (map) of the global ocean, the researchers compiled thousands and tens of thousands of data points to identify regions of plankton abundance and scarcity as well as areas of data abundance and scarcity. At many of the grid points, the MAREDAT team accomplished the difficult conversion from abundance (numbers of organisms) to biomass (carbon mass of organisms). The MAREDAT atlas provides an unprecedented global data set for ecological and biochemical analysis and modeling as well as a clear mandate for compiling additional existing data and for focusing future data gathering efforts on key groups in key areas of the ocean. This is a gridded data product about diazotrophic organisms . There are 6 variables. Each variable is gridded on a dimension of 360 (longitude) * 180 (latitude) * 33 (depth) * 12 (month). The first group of 3 variables are: (1) number of biomass observations, (2) biomass, and (3) special nifH-gene-based biomass. The second group of 3 variables is same as the first group except that it only grids non-zero data. We have constructed a database on diazotrophic organisms in the global pelagic upper ocean by compiling more than 11,000 direct field measurements including 3 sub-databases: (1) nitrogen fixation rates, (2) cyanobacterial diazotroph abundances from cell counts and (3) cyanobacterial diazotroph abundances from qPCR assays targeting nifH genes. Biomass conversion factors are estimated based on cell sizes to convert abundance data to diazotrophic biomass. Data are assigned to 3 groups including Trichodesmium, unicellular diazotrophic cyanobacteria (group A, B and C when applicable) and heterocystous cyanobacteria (Richelia and Calothrix). Total nitrogen fixation rates and diazotrophic biomass are calculated by summing the values from all the groups. Some of nitrogen fixation rates are whole seawater measurements and are used as total nitrogen fixation rates. Both volumetric and depth-integrated values were reported. Depth-integrated values are also calculated for those vertical profiles with values at 3 or more depths.
    Keywords: MAREMIP; MARine Ecosystem Model Intercomparison Project
    Type: Dataset
    Format: application/zip, 1.7 MBytes
    Location Call Number Expected Availability
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    DATA PANGAEA
  • 2
    facet.materialart.
    Unknown
    Global distributions of diazotrophs abundance and biomass - Depth integrated values computed from a collection of source datasets - Contribution to the MAREDAT World Ocean Atlas of Plankton Functional Types (2013)
    PANGAEA
    In:  Supplement to: Luo, Yawei; Doney, Scott C; Anderson, L A; Benavides, Mar; Berman-Frank, I; Bode, Antonio; Bonnet, S; Boström, Kjärstin H; Böttjer, D; Capone, D G; Carpenter, E J; Chen, Yaw-Lin; Church, Matthew J; Dore, John E; Falcón, Luisa I; Fernández, A; Foster, R A; Furuya, Ken; Gomez, Fernando; Gundersen, Kjell; Hynes, Annette M; Karl, David Michael; Kitajima, Satoshi; Langlois, Rebecca; LaRoche, Julie; Letelier, Ricardo M; Marañón, Emilio; McGillicuddy Jr, Dennis J; Moisander, Pia H; Moore, C Mark; Mouriño-Carballido, Beatriz; Mulholland, Margaret R; Needoba, Joseph A; Orcutt, Karen M; Poulton, Alex J; Rahav, Eyal; Raimbault, Patrick; Rees, Andrew; Riemann, Lasse; Shiozaki, Takuhei; Subramaniam, Ajit; Tyrrell, Toby; Turk-Kubo, Kendra A; Varela, Manuel; Villareal, Tracy A; Webb, Eric A; White, Angelicque E; Wu, Jingfeng; Zehr, Jonathan P (2012): Database of diazotrophs in global ocean: abundance, biomass and nitrogen fixation rates. Earth System Science Data, 4, 47-73, https://doi.org/10.5194/essd-4-47-2012
    Details
    Publication Date: 2023-12-09
    Description: The MAREDAT atlas covers 11 types of plankton, ranging in size from bacteria to jellyfish. Together, these plankton groups determine the health and productivity of the global ocean and play a vital role in the global carbon cycle. Working within a uniform and consistent spatial and depth grid (map) of the global ocean, the researchers compiled thousands and tens of thousands of data points to identify regions of plankton abundance and scarcity as well as areas of data abundance and scarcity. At many of the grid points, the MAREDAT team accomplished the difficult conversion from abundance (numbers of organisms) to biomass (carbon mass of organisms). The MAREDAT atlas provides an unprecedented global data set for ecological and biochemical analysis and modeling as well as a clear mandate for compiling additional existing data and for focusing future data gathering efforts on key groups in key areas of the ocean. The present data set presents depth integrated values of diazotrophs abundance and biomass, computed from a collection of source data sets.
    Keywords: 33KB20020923; 33RR20030714; A2/19921126; A2/1992-11-27; AMT8/1999-05-05; AMT8/1999-05-06; AMT8/1999-05-07; AMT8/1999-05-08; AMT8/1999-05-10; AMT8/1999-05-12; AMT8/1999-05-13; AMT8/1999-05-18; AMT8/1999-05-20; AMT8/1999-05-21; AMT8/1999-05-23; AMT8/1999-05-25; AMT8/1999-05-26; AMT8/1999-05-28; AMT8/1999-05-29; AT19641122; AT19641123; AT19641202; AT19641203; AT19641208; Atlantic; Barbados; Barbados_1974-07-09_1; Barbados_1974-07-16_1; Barbados_1974-07-23_1; Barbados_1974-07-28_1; Barbados_1974-08-07_1; Barbados_1974-08-11_1; Barbados_1974-08-21_1; Barbados_1974-08-27_1; Barbados_1974-09-03_1; Barbados_1974-09-10_1; Barbados_1974-09-17_1; Barbados_1974-09-24_1; Barbados_1974-10-03_1; Barbados_1974-10-08_1; Barbados_1974-10-15_1; Barbados_1974-10-22_1; Barbados_1974-10-29_1; Barbados_1974-11-05_1; Barbados_1974-11-12_1; Barbados_1974-11-19_1; Barbados_1974-11-29_1; Barbados_1974-12-03_1; Barbados_1974-12-10_1; Barbados_1974-12-17_1; Barbados_1974-12-23_1; Barbados_1974-12-30_1; Barbados_1975-01-07_1; Barbados_1975-01-14_1; Barbados_1975-01-21_1; Barbados_1975-01-31_1; Barbados_1975-02-04_1; Barbados_1975-02-11_1; Barbados_1975-02-15_1; Barbados_1975-03-05_1; Barbados_1975-03-18_1; Barbados_1975-04-01_1; Barbados_1975-04-18_1; Barbados_1975-04-29_1; Barbados_1975-05-13_1; Barbados_1975-05-21_1; Barbados_1975-05-27_1; Barbados_1975-06-10_1; Barbados_1975-06-24_1; Barbados_1975-07-08_1; Barbados_1975-08-05_1; Barbados_1975-08-25_1; Barbados_1975-10-15_1; Barbados_1975-11-17_1; Barbados_1975-12-10_1; Barbados_1976-01-02_1; Barbados_1976-01-19_1; Barbados_1976-02-10_1; Barbados_1976-03-12_1; Barbados_1976-04-15_1; Barbados_1976-05-14_1; BATS1995-05-15; BATS1996-10-10; Bermuda, Atlantic Ocean; Bottle, Niskin; CAIBEX-I; CAIBEX-I_2; CAIBEX-I_3; CAIBEX-I_5; CAIBEX-I_6; CAIBEX-II; CAIBEX-II_01; CAIBEX-II_02; CAIBEX-II_03; CAIBEX-II_04; CAIBEX-II_05; CAIBEX-II_06; CAIBEX-II_07; CAIBEX-II_08; CAIBOX; CAIBOX_01; CAIBOX_02; CAIBOX_03; CAIBOX_04; CAIBOX_05; CAIBOX_06; CAIBOX_07; CAIBOX_08; CAIBOX_09; CAIBOX_10; CAIBOX_11; CAIBOX_12; CAIBOX_13; CAIBOX_14; CAIBOX_15; CAIBOX_16; CAIBOX_17; Calculated; Calothrix, associated species; Calothrix, carbon per cell; Calothrix abundance, cells; China Sea; Chlorophyll total, areal concentration; CTD, Seabird; CTD/Rosette; CTD-R; CTD-RO; Date/Time of event; Depth, bottom/max; Depth, top/min; DEPTH, water; Diazotrophs, total biomass as carbon; East China Sea; ECS1993-11-15_1; ECS1993-11-15_2; ECS1993-11-15_3; ECS1993-11-15_4; ECS1993-11-15_5; ECS1993-11-15_6; ECS1994-03-15_1; ECS1994-03-15_2; ECS1994-03-15_3; ECS1994-03-15_4; ECS1994-03-15_5; ECS1994-05-05_1; ECS1994-05-05_2; ECS1994-07-05_1; ECS1994-07-05_2; ECS1994-07-05_3; ECS1994-07-05_4; ECS1995-03-28_1; ECS1995-03-28_2; ECS1995-04-17_1; ECS1995-04-17_2; ECS1995-04-17_3; ECS1995-04-17_4; ECS1995-04-17_5; ECS1995-10-01_1; ECS1995-10-01_10; ECS1995-10-01_11; ECS1995-10-01_12; ECS1995-10-01_13; ECS1995-10-01_2; ECS1995-10-01_3; ECS1995-10-01_4; ECS1995-10-01_5; ECS1995-10-01_6; ECS1995-10-01_7; ECS1995-10-01_8; ECS1995-10-01_9; ECS1996-01-04; ECS1996-04-26_1; ECS1996-04-26_2; ECS1996-04-26_3; ECS1996-04-26_4; ECS1996-04-26_5; ECS1996-04-26_6; ECS1996-04-26_7; ECS1996-04-26_8; ECS1996-04-26_9; Event label; GOFLO; Go-Flo bottles; Gomez2004-10-26; Gomez2004-10-30; Gomez2004-11-03; Gomez2004-11-07; Gomez2004-11-11; Gomez2004-11-15; Gomez2004-11-19; Gomez2004-11-23; Gomez2004-11-27; Gomez2004-12-01; Gomez2004-12-05; Gomez2004-12-09; HakuhoMaru2002-12-07; HakuhoMaru2002-12-09; HakuhoMaru2002-12-11; HakuhoMaru2002-12-13; HakuhoMaru2002-12-15; HakuhoMaru2002-12-17; HakuhoMaru2002-12-18; Heterocyst, biomass; Indian Ocean; Iron; Latitude of event; Longitude of event; MAREMIP; MARine Ecosystem Model Intercomparison Project; Measured at sea surface; Meville2002-06-24; Meville2002-06-26; Meville2002-06-28; Meville2002-06-30; Meville2002-07-02; Meville2002-07-03; Meville2002-07-04; Meville2002-07-05; Meville2002-07-06; Meville2002-07-07; Meville2002-07-08; Meville2002-07-11; Meville2002-07-12; Mirai2003-01-15; Mirai2003-01-17; Mirai2003-01-18; Mirai2003-01-20; Mirai2003-01-21; Mirai2003-01-23; Mirai2003-01-24; Mirai2003-01-26; Mirai2003-01-28; MP-6; MP-6_01; MP-6_02; MP-6_03; MP-6_04; MP-6_05; MP-6_06; MP-6_07; MP-6_08; MP-6_09; MP-6_10; MP-6_11; MP-6_12; MP-6_13; MP-6_14; MP-6_15; MP-6_16; MP-6_17; MP-6_19; MP-6_20; MP-6_21; MP-6_22; MP-6_23; MP-9; MP-9_01; MP-9_02; MP-9_03; MP-9_04; MP-9_05; MP-9_06; MP-9_08; MP-9_09; MP-9_10; MP-9_11; MP-9_12; MP-9_13; MP-9_14; MP-9_15; MP-9_16; MP-9_17; MP-9_18; MP-9_19; MP-9_20; MP-9_21; MP-9_22; MP-9_23; MP-9_24; MP-9_25; MP-9_27; MULT; Multiple investigations; MW19950822_21; NA1975-05-25; NA19750526; NA19750527; NA19750528; NA1975-05-29; NA19750530; NA19750531; NA1975-06-01; NA1975-06-02; NA1975-06-03; NA1975-06-04; NA1975-06-05; NA1975-06-06; NewHorizon2003-08-22; NewHorizon2003-08-25; NewHorizon2003-08-26; NewHorizon2003-08-27; NewHorizon2003-08-28; NewHorizon2003-08-30; NewHorizon2003-08-31; NewHorizon2003-09-01; NewHorizon2003-09-03; NewHorizon2003-09-04; NewHorizon2003-09-05; NewHorizon2003-09-07; NewHorizon2003-09-08; NewHorizon2003-09-09; NewHorizon2003-09-11; NewHorizon2003-09-12; NewHorizon2003-09-13; NewHorizon2003-09-14; NIS; Nitrate; North Atlantic; Northeast Atlantic; North Pacific; North Pacific Ocean; Northwest Pacific; NPO1969-08-28; NPO1969-09-01; NPO1969-09-05; NPO1969-09-09; NPO1969-09-11; NPO1969-09-14; NPO1969-09-17; NPO1969-09-19; NPO1969-09-23; NPO1969-09-27; NPO1969-10-01; NPO1969-10-05; NPO1969-10-10; NWP2002-10-21_1; NWP2002-10-21_2; NWP2002-10-21_3; NWP2002-10-21_4; NWP2002-10-21_5; NWP2004-02-11; NWP2004-02-22; NWP2004-05-05; NWP2004-06-26; NWP2004-06-30; NWP2004-07-04; NWP2004-08-07; NWP2004-11-06; NWP2005-03-31; NWP2005-04-22; NWP2005-04-23; NWP2005-04-24; NWP2005-04-25_1; NWP2005-04-25_2; NWP2005-04-26; NWP2005-04-27; NWP2005-04-28; NWP2005-04-29; NWP2005-04-30_1; NWP2005-04-30_2; NWP2005-05-01; NWP2005-08-10; NWP2005-08-15; NWP2005-11-10; NWP2005-12-26; NWP2006-07-03; NWP2006-10-21; NWP2006-12-20; NWP2006-12-25; NWP2007-01-15; OR-I/414_1; OR-I/414_2; OR-I/448; OR-II/034; OR-II/111_1; OR-II/111_2; OR-II/149_1; OR-II/149_2; Phosphate; Richelia, associated species; Richelia, carbon per cell; Richelia abundance, cells; Roger A. Revelle; RV Kilo Moana; Salinity; Sample comment; Sample method; Sargasso Sea; SargassoSea_1973-09-17; SargassoSea_1973-09-19; SargassoSea_1973-09-20; SargassoSea_1973-09-21; SargassoSea_1973-09-28; SargassoSea_1973-09-29; SargassoSea_1973-10-01; SargassoSea_1973-10-02; SargassoSea_1973-10-03; SargassoSea_1974-02-06; SargassoSea_1974-02-08; SargassoSea_1974-02-11; SargassoSea_1974-02-12; SargassoSea_1974-02-13; SargassoSea_1974-02-14; SargassoSea_1974-02-16; SargassoSea_1974-02-17; SargassoSea_1974-02-18; SargassoSea_1974-02-19; SargassoSea_1974-02-20; SargassoSea_1974-02-21; SargassoSea_1974-02-22; SargassoSea_1974-02-26; SargassoSea_1974-02-27; SargassoSea_1974-03-01; SargassoSea_1974-03-02; SargassoSea_1974-03-03; SargassoSea_1974-03-04; SargassoSea_1974-03-05; SargassoSea_1974-08-08; SargassoSea_1974-08-09; SargassoSea_1974-08-10_1; SargassoSea_1974-08-10_2; SargassoSea_1974-08-11; SargassoSea_1974-08-12; SargassoSea_1974-08-13; SargassoSea_1974-08-14; SargassoSea_1974-08-15; SargassoSea_1974-08-16; SargassoSea_1974-08-17; SargassoSea_1974-08-18; SargassoSea_1974-08-19; SargassoSea_1974-08-20; SargassoSea_1974-08-21; Sarmiento de Gamboa; SCS2000-07-04; SCS2000-07-08; SCS2000-07-12; SCS2000-10-05; SCS2000-10-06; SCS2000-10-07; SCS2000-10-08; SCS2000-10-09; SCS2000-10-10; SCS2000-10-11; SCS2000-10-12; SCS2001-03-21; SCS2001-03-22; SCS2001-03-23; SCS2001-03-24; SCS2001-03-25; SCS2001-03-26; SCS2001-03-27; SCS2001-03-28; SCS2001-03-29; SCS2001-03-30; SCS2001-06-28; SCS2001-06-30; SCS2001-07-02; SCS2001-07-04; SCS2001-07-06; SCS2001-10-23; SCS2001-10-25; SCS2001-10-27; SCS2001-10-29; SCS2001-10-31; SCS2002-03-04; SCS2002-03-05; SCS2002-03-06; SCS2002-03-07; SCS2002-03-08; SCS2002-03-09; SCS2002-03-10;
    Type: Dataset
    Format: text/tab-separated-values, 8546 data points
    Location Call Number Expected Availability
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    DATA PANGAEA
  • 3
    facet.materialart.
    Unknown
    Global distributions of diazotrophs nitrogen fixation rates - Depth integrated values computed from a collection of source datasets - Contribution to the MAREDAT World Ocean Atlas of Plankton Functional Types (2013)
    PANGAEA
    In:  Supplement to: Luo, Yawei; Doney, Scott C; Anderson, L A; Benavides, Mar; Berman-Frank, I; Bode, Antonio; Bonnet, S; Boström, Kjärstin H; Böttjer, D; Capone, D G; Carpenter, E J; Chen, Yaw-Lin; Church, Matthew J; Dore, John E; Falcón, Luisa I; Fernández, A; Foster, R A; Furuya, Ken; Gomez, Fernando; Gundersen, Kjell; Hynes, Annette M; Karl, David Michael; Kitajima, Satoshi; Langlois, Rebecca; LaRoche, Julie; Letelier, Ricardo M; Marañón, Emilio; McGillicuddy Jr, Dennis J; Moisander, Pia H; Moore, C Mark; Mouriño-Carballido, Beatriz; Mulholland, Margaret R; Needoba, Joseph A; Orcutt, Karen M; Poulton, Alex J; Rahav, Eyal; Raimbault, Patrick; Rees, Andrew; Riemann, Lasse; Shiozaki, Takuhei; Subramaniam, Ajit; Tyrrell, Toby; Turk-Kubo, Kendra A; Varela, Manuel; Villareal, Tracy A; Webb, Eric A; White, Angelicque E; Wu, Jingfeng; Zehr, Jonathan P (2012): Database of diazotrophs in global ocean: abundance, biomass and nitrogen fixation rates. Earth System Science Data, 4, 47-73, https://doi.org/10.5194/essd-4-47-2012
    Details
    Publication Date: 2023-12-18
    Description: The MAREDAT atlas covers 11 types of plankton, ranging in size from bacteria to jellyfish. Together, these plankton groups determine the health and productivity of the global ocean and play a vital role in the global carbon cycle. Working within a uniform and consistent spatial and depth grid (map) of the global ocean, the researchers compiled thousands and tens of thousands of data points to identify regions of plankton abundance and scarcity as well as areas of data abundance and scarcity. At many of the grid points, the MAREDAT team accomplished the difficult conversion from abundance (numbers of organisms) to biomass (carbon mass of organisms). The MAREDAT atlas provides an unprecedented global data set for ecological and biochemical analysis and modeling as well as a clear mandate for compiling additional existing data and for focusing future data gathering efforts on key groups in key areas of the ocean. The present data set presents depth integrated values of diazotrophs nitrogen fixation rates, computed from a collection of source data sets.
    Keywords: 33KB20020923; 33RR20030714; Alis; ALOHA2000-07-26; ALOHA2000-11-30; ALOHA2001-03-21; ALOHA2001-06-14; ALOHA2004-11-28; ALOHA2005-02-02; ALOHA2005-03-05; ALOHA2005-06-15; ALOHA2005-07-16; ALOHA2005-08-14; ALOHA2005-09-09; ALOHA2005-10-08; ALOHA2005-11-16; ALOHA2005-12-13; ALOHA2006-01-25; ALOHA2006-02-15; ALOHA2006-03-10; ALOHA2006-04-01; ALOHA2006-05-26; ALOHA2006-06-13; ALOHA2006-07-12; ALOHA2006-08-08; ALOHA2006-09-15; ALOHA2006-10-19; ALOHA2006-11-08; ALOHA2006-12-09; ALOHA2007-02-06; ALOHA2007-03-20; ALOHA2007-05-03; ALOHA2007-06-09; ALOHA2007-07-07; ALOHA2007-08-02; ALOHA2007-09-02; ALOHA2007-12-20; ALOHA2008-01-28; ALOHA2008-02-23; ALOHA2008-05-27; ALOHA2008-06-25; ALOHA2008-07-26; ALOHA2008-08-17; ALOHA2008-10-11; ALOHA2008-12-01; ALOHA2009-01-21; ALOHA2009-02-18; ALOHA2009-04-29; ALOHA2009-05-28; ALOHA2009-07-04; ALOHA2009-07-25; ALOHA2009-09-26; ALOHA2009-11-05; ALOHA2010-04-08; ALOHA2010-05-20; ALOHA2010-06-10; ALOHA2010-07-10; ALOHA2010-08-09; ALOHA2010-09-05; ALOHA2010-10-05; AMT17/01; AMT17/02; AMT17/03; AMT17/04; AMT17/05; AMT17/06; AMT17/07; AMT17/08; AMT17/09; AMT17/10; Arabian Sea; AT19641122; AT19641123; AT19641202; AT19641203; Atalante20080627; Atalante20080628; Atalante20080704; Atalante20080705; Atalante20080709/1; Atalante20080710; Atalante20080712; Atalante20080713; Atalante20080714; Atlantic; BIOSOPE_EGY; BIOSOPE_GYR; BIOSOPE_HLNC; BIOSOPE_MAR; BIOSOPE_UPW; BIOSOPE04-10-28; BIOSOPE04-10-30; BIOSOPE04-11-03; BIOSOPE04-11-04; BIOSOPE04-11-06; BIOSOPE04-11-07; BIOSOPE04-11-08; BIOSOPE04-11-10; BIOSOPE04-11-12; BIOSOPE04-11-20; BIOSOPE04-11-21; BIOSOPE04-11-23; BIOSOPE04-11-24; BIOSOPE04-11-28; BIOSOPE04-12-01; BIOSOPE04-12-02; BIOSOPE04-12-03; BIOSOPE04-12-04; BIOSOPE04-12-05; Bottle, Niskin; CAIBEX-I; CAIBEX-I_1; CAIBEX-I_2; CAIBEX-I_3; CAIBEX-I_4; CAIBEX-I_5; CAIBEX-I_6; CAIBEX-I_7; CAIBEX-II; CAIBEX-II_01; CAIBEX-II_02; CAIBEX-II_03; CAIBEX-II_04; CAIBEX-II_05; CAIBEX-II_06; CAIBEX-II_07; CAIBEX-II_08; CAIBOX; CAIBOX_01; CAIBOX_02; CAIBOX_03; CAIBOX_04; CAIBOX_05; CAIBOX_06; CAIBOX_07; CAIBOX_08; CAIBOX_09; CAIBOX_10; CAIBOX_11; CAIBOX_12; CAIBOX_13; CAIBOX_14; CAIBOX_15; CAIBOX_16; CAIBOX_17; Calculated; Cape Verde; CATO-I/9; Chlorophyll total, areal concentration; CLIMAX_VII/1973-08-18; CLIMAX_VII/1973-08-27; CLIMAX_VII/1973-08-29; CLIMAX_VII/1973-08-31; CLIMAX_VII/1973-09-02; CLIMAX_VII/1973-09-04; CLIMAX_VII/1973-09-07; CLIMAX_VII/1973-09-09; Cook25_7; CTD/Rosette; CTD-RO; D325_Stn-A-01; D325_Stn-C-01; D325_Stn-D-07; D325_Stn-E-01; D325_Stn-F-07; Date/Time of event; Depth, bottom/max; Depth, top/min; DEPTH, water; Diapalis-3; Diapalis-3_1; Diapalis-3_2; Diapalis-3_3; Diapalis-3_4; Diapalis-4; Diapalis-4_1; Diapalis-4_2; Diapalis-4_3; Diapalis-4_4; Diapalis-5; Diapalis-5_1; Diapalis-5_3; Diapalis-5_4; Diapalis-5_5; Diapalis-6; Diapalis-6_1; Diapalis-6_2; Diapalis-6_3; Diapalis-6_4; Diapalis-6_5; Diapalis-6_6; Diapalis-7; Diapalis-7_1; Diapalis-7_2; Diapalis-7_3; Diapalis-7_4; Diapalis-7_6; Diapalis-7_7; Diapalis-9; Diapalis-9_1; Diapalis-9_2; Diapalis-9_3; Diapalis-9_4; Diapalis-9_5; DIAPAZON_Diapalis-3; DIAPAZON_Diapalis-4; DIAPAZON_Diapalis-5; DIAPAZON_Diapalis-6; DIAPAZON_Diapalis-7; DIAPAZON_Diapalis-9; DYFAMED2003-03-26; DYFAMED2003-03-30; DYFAMED2004-01-25; DYFAMED2004-02-24; DYFAMED2004-04-25; DYFAMED2004-05-27; DYFAMED2004-07-01; DYFAMED2004-07-31; DYFAMED2004-08-31; DYFAMED2004-09-18; DYFAMED2004-10-14; Equatorial Pacific; Event label; GoA_StnA2010-03-18; GOFLO; Go-Flo bottles; Gulf of Aqaba; Gundersen_1; Gundersen_2; Hawaiian Islands, North Central Pacific; Hesperides_03a; Hesperides_05a; Hesperides_06a; Hesperides_07a; Hesperides_08a; Hesperides_12a; Hesperides_13a; Hesperides_14a; Hesperides_17a; Hesperides_18a; Hesperides_19a; Hesperides_20a; Hesperides_21a; Hesperides_23a; Hesperides_24a; Hesperides_25a; Hesperides_26a; Hesperides_27a; Hesperides_28a; Hesperides_29a; Hesperides_30a; Hesperides_31a; Hesperides_32a; Hesperides_33a; Hesperides_34a; Hesperides_36a; Hesperides_37a; Hesperides_38a; Hesperides_39a; Hesperides_40a; Hesperides_41a; Hesperides_42a; Heterocyst, nitrogen fixation rate; Iron; KiloMoana20060609/1; KiloMoana20060609/2; KiloMoana20060821; KiloMoana20060826; KiloMoana20060922; KiloMoana20060923; KiloMoana20060925; KiloMoana20060927; KiloMoana20060930; KiloMoana20061009; Latitude of event; LB2008-09-12; LB2008-09-16; Levantine Basin; Ligurian Sea, Mediterranean; Longitude of event; MAREMIP; MARine Ecosystem Model Intercomparison Project; Measured at sea surface; Mediterranean Sea; Mooring (long time); MOORY; MP-6; MP-6_01; MP-6_02; MP-6_03; MP-6_04; MP-6_05; MP-6_06; MP-6_07; MP-6_08; MP-6_09; MP-6_10; MP-6_11; MP-6_12; MP-6_13; MP-6_14; MP-6_15; MP-6_16; MP-6_18; MP-6_19; MP-6_20; MP-6_21; MP-6_22; MP-6_23; MP-9; MP-9_01; MP-9_02; MP-9_03; MP-9_04; MP-9_05; MP-9_06; MP-9_07; MP-9_09; MP-9_10; MP-9_11; MP-9_12; MP-9_13; MP-9_14; MP-9_15; MP-9_16; MP-9_17; MP-9_18; MP-9_19; MP-9_20; MP-9_21; MP-9_22; MP-9_23; MP-9_24; MP-9_25; MP-9_26; MP-9_27; MR07-01/02; MR07-01/03; MR07-01/04; MR07-01/05; MR07-01/06; MR07-01/07; MR07-01/08; MR07-01/09; MR07-01/10; MR07-01/11; Mulholland_2006-07-01; Mulholland_2006-07-02; Mulholland_2006-07-03; Mulholland_2006-07-04; Mulholland_2006-07-05; Mulholland_2006-07-06; Mulholland_2006-07-07; Mulholland_2006-07-08; Mulholland_2006-07-09; Mulholland_2006-07-10; Mulholland_2006-07-11; Mulholland_2006-07-12; Mulholland_2006-07-13; Mulholland_2006-07-14; Mulholland_2006-10-25; Mulholland_2006-10-26; Mulholland_2006-10-27; Mulholland_2006-10-28; Mulholland_2006-10-29; Mulholland_2006-10-30; Mulholland_2006-10-31; Mulholland_2006-11-01; Mulholland_2006-11-02; Mulholland_2006-11-03; Mulholland_2006-11-04; Mulholland_2006-11-05; Mulholland_2006-11-06; Mulholland_2006-11-07; Mulholland_2006-11-08; Mulholland_2006-11-09; Mulholland_2008-05-03_1; Mulholland_2008-05-04_1; Mulholland_2008-05-05_1; Mulholland_2008-05-05_2; Mulholland_2008-05-06_1; Mulholland_2008-05-07_1; Mulholland_2008-05-10_1; Mulholland_2008-05-11_1; Mulholland_2008-05-12_1; Mulholland_2008-05-13_1; Mulholland_2008-05-14_1; Mulholland_2008-05-15_1; Mulholland_2008-05-16_1; Mulholland_2008-05-17_1; Mulholland_2008-05-18_1; Mulholland_2008-05-19_1; Mulholland_2008-05-20_1; Mulholland_2008-05-21_1; Mulholland_2008-05-22_1; Mulholland_2008-05-24_1; Mulholland_2009-08-17_1; Mulholland_2009-08-18_1; Mulholland_2009-08-18_2; Mulholland_2009-08-19_1; Mulholland_2009-08-19_2; Mulholland_2009-08-20_1; Mulholland_2009-08-20_3; Mulholland_2009-08-21_1; Mulholland_2009-08-21_3; Mulholland_2009-08-22_1; Mulholland_2009-08-22_3; Mulholland_2009-08-23; Mulholland_2009-08-24_1; Mulholland_2009-08-24_3; Mulholland_2009-08-25_3; Mulholland_2009-08-26_3; Mulholland_2009-08-27_2; Mulholland_2009-08-27_3; Mulholland_2009-11-04_2; Mulholland_2009-11-05_1; Mulholland_2009-11-08_1; Mulholland_2009-11-09_3; Mulholland_2009-11-10_3; Mulholland_2009-11-11_1; Mulholland_2009-11-18_1; Mulholland_2009-11-18_3; NA19750526; NA19750527; NA19750528; NA19750530; NA19750531; NIS; Nitrate; Nitrogen fixation rate, integrated per day; Nitrogen fixation rate, whole seawater; North Atlantic; Northeast Atlantic; North Pacific; Pacific; Phosphate; PUMP; Rahav_2009-07-13_1; Rahav_2009-07-14_1; Rahav_2009-07-16_1; Rahav_2009-12-07_1; Rees2004-03-05/01; Rees2004-04-05; Rees2004-05-16; Rees2004-05-19/01; Rees2004-05-21/01; Rees2004-07-05/01; Rees2004-09-05/01; Roger A. Revelle; RV Kilo Moana; Salinity; Sample comment; Sample method; Sargasso Sea; SargassoSea_1973-09-17; SargassoSea_1973-09-19; SargassoSea_1973-09-20; SargassoSea_1973-09-21; SargassoSea_1973-09-28; SargassoSea_1973-09-29; SargassoSea_1973-10-01; SargassoSea_1973-10-02; SargassoSea_1973-10-03; SargassoSea_1974-02-06; SargassoSea_1974-02-08; SargassoSea_1974-02-11; SargassoSea_1974-02-13; SargassoSea_1974-02-14; SargassoSea_1974-02-16; SargassoSea_1974-02-17; SargassoSea_1974-02-18; SargassoSea_1974-02-19; SargassoSea_1974-02-20; SargassoSea_1974-02-21; SargassoSea_1974-02-26;
    Type: Dataset
    Format: text/tab-separated-values, 5926 data points
    Location Call Number Expected Availability
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    DATA PANGAEA
  • 4
    facet.materialart.
    Unknown
    Global distributions of diazotrophs abundance, biomass and nitrogen fixation rates - Collection of source datasets - Contribution to the MAREDAT World Ocean Atlas of Plankton Functional Types (2013)
    PANGAEA
    Details
    Publication Date: 2024-03-30
    Description: The MAREDAT atlas covers 11 types of plankton, ranging in size from bacteria to jellyfish. Together, these plankton groups determine the health and productivity of the global ocean and play a vital role in the global carbon cycle. Working within a uniform and consistent spatial and depth grid (map) of the global ocean, the researchers compiled thousands and tens of thousands of data points to identify regions of plankton abundance and scarcity as well as areas of data abundance and scarcity. At many of the grid points, the MAREDAT team accomplished the difficult conversion from abundance (numbers of organisms) to biomass (carbon mass of organisms). The MAREDAT atlas provides an unprecedented global data set for ecological and biochemical analysis and modeling as well as a clear mandate for compiling additional existing data and for focusing future data gathering efforts on key groups in key areas of the ocean. The present collection presents the original data sets used to compile Global distributions of diazotrophs abundance, biomass and nitrogen fixation rates
    Keywords: MAREDAT_Diazotrophs_Collection; MAREMIP; MARine Ecosystem Model Intercomparison Project
    Type: Dataset
    Format: application/zip, 94 datasets
    Location Call Number Expected Availability
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    DATA PANGAEA
  • 5
    facet.materialart.
    Unknown
    Global distributions of diazotrophs Gamma-A nifH genes abundance - Depth integrated values computed from a collection of source datasets - Contribution to the MAREDAT World Ocean Atlas of Plankton Functional Types (2013)
    PANGAEA
    In:  Supplement to: Luo, Yawei; Doney, Scott C; Anderson, L A; Benavides, Mar; Berman-Frank, I; Bode, Antonio; Bonnet, S; Boström, Kjärstin H; Böttjer, D; Capone, D G; Carpenter, E J; Chen, Yaw-Lin; Church, Matthew J; Dore, John E; Falcón, Luisa I; Fernández, A; Foster, R A; Furuya, Ken; Gomez, Fernando; Gundersen, Kjell; Hynes, Annette M; Karl, David Michael; Kitajima, Satoshi; Langlois, Rebecca; LaRoche, Julie; Letelier, Ricardo M; Marañón, Emilio; McGillicuddy Jr, Dennis J; Moisander, Pia H; Moore, C Mark; Mouriño-Carballido, Beatriz; Mulholland, Margaret R; Needoba, Joseph A; Orcutt, Karen M; Poulton, Alex J; Rahav, Eyal; Raimbault, Patrick; Rees, Andrew; Riemann, Lasse; Shiozaki, Takuhei; Subramaniam, Ajit; Tyrrell, Toby; Turk-Kubo, Kendra A; Varela, Manuel; Villareal, Tracy A; Webb, Eric A; White, Angelicque E; Wu, Jingfeng; Zehr, Jonathan P (2012): Database of diazotrophs in global ocean: abundance, biomass and nitrogen fixation rates. Earth System Science Data, 4, 47-73, https://doi.org/10.5194/essd-4-47-2012
    Details
    Publication Date: 2024-03-30
    Description: The MAREDAT atlas covers 11 types of plankton, ranging in size from bacteria to jellyfish. Together, these plankton groups determine the health and productivity of the global ocean and play a vital role in the global carbon cycle. Working within a uniform and consistent spatial and depth grid (map) of the global ocean, the researchers compiled thousands and tens of thousands of data points to identify regions of plankton abundance and scarcity as well as areas of data abundance and scarcity. At many of the grid points, the MAREDAT team accomplished the difficult conversion from abundance (numbers of organisms) to biomass (carbon mass of organisms). The MAREDAT atlas provides an unprecedented global data set for ecological and biochemical analysis and modeling as well as a clear mandate for compiling additional existing data and for focusing future data gathering efforts on key groups in key areas of the ocean. The present data set presents depth integrated values of diazotrophs Gamma-A nifH genes abundance, computed from a collection of source data sets.
    Keywords: 06MT60_5; 06MT60_5/158; 06MT60_5/159; 06MT60_5/161; 06MT60_5/173; 06MT60_5/180; 06MT60_5/181; 06MT60_5/184; 06MT60_5/187; 06MT60_5/188; 06MT60_5/189; 06MT60_5/190; 06MT60_5/192; 06MT60_5/199; ALOHA2002-12-13; ALOHA2002-12-14; ALOHA2005-07-16; ALOHA2005-07-26_01; ALOHA2005-07-26_02; ALOHA2005-07-26_03; ALOHA2005-07-26_04; ALOHA2005-07-26_05; ALOHA2005-07-26_06; ALOHA2005-07-26_07; ALOHA2005-07-26_08; ALOHA2005-08-13; Arabian Sea; Bottle, Niskin; Calculated; Calothrix, abundance expressed in number of nifH gene copies; Calothrix, associated species; Calothrix, biological trait, ratio expressed in mass of carbon per amount of nifH gene copies; CD132; CD132 _AMBITION; CD132_AMBITION/1; CD132_AMBITION/2; CD132_AMBITION/3; CD132_AMBITION/4; CD132/1; CD132/2; CD132/3; CD132/4; Charles Darwin; China Sea; Chlorophyll a; CTD, Seabird; CTD/Rosette; CTD-R; CTD-RO; Date/Time of event; Depth, bottom/max; Depth, top/min; DEPTH, water; Diazotrophs, total biomass as carbon; Eastern equatorial Atlantic; EEA2007-06-14_Stn8; EEA2007-06-15_Stn9; Event label; Foster2008-07-12; Foster2008-07-14; Foster2008-07-15; Foster2008-07-18; Hawaiian Islands, North Central Pacific; Heterocyst, biomass; In situ pump; Iron; ISP; Latitude of event; Longitude of event; M55_30a; M55_36a; M55_38a; M55_44a; M55_45; M55_48a; M55/1; M60/5; M60/5_158; M60/5_159; M60/5_161; M60/5_163a; M60/5_173; M60/5_180; M60/5_181; M60/5_184; M60/5_187; M60/5_188; M60/5_189; M60/5_190; M60/5_192; M60/5_199; MAREMIP; MARine Ecosystem Model Intercomparison Project; Measured at sea surface; Meteor (1986); NIS; Nitrate; North Atlantic sub-tropical gyre; North Pacific; Phosphate; Proteobacteria, abundance expressed in number of nifH gene copies; Richelia, abundance expressed in number of nifH gene copies; Richelia, associated species; Richelia, biological trait, ratio expressed in mass of carbon per amount of nifH gene copies; Salinity; Sample comment; Sample method; SCS2009-08-10; SCS2009-08-15; SCS2009-08-20; SCS2009-08-25; SO187/2; SO187/2_33-1; SO187/2_44-1; SO187/2_45-1-1a; SO187/2_45-4; SO187/2_46-1; SO187/2_48-1; SO187/2_53-1a; SO187/2_54-2; Sonne; South China Sea; South Pacific Ocean; SPO2003-03-17; SPO2003-03-18; SPO2003-03-19; SPO2003-03-20; SPO2003-03-21; SPO2003-03-22-1; SPO2003-03-22-2; SPO2003-03-24; SPO2003-03-25; SPO2003-03-28; SPO2003-03-29; SPO2003-03-30; SPO2003-03-31; SPO2003-04-02; SPO2003-04-03; SPO2003-04-05; SPO2003-04-06; SPO2003-04-07; SPO2003-04-08; SPO2003-04-09; SPO2003-04-10; SPO2003-04-12; SPO2003-04-13; SW2006-06-22; SW2006-06-23; SW2006-06-27; SW2006-06-28; SW2006-06-29; SW2006-06-30; SW2006-07-01; SW2006-07-03; SW2006-07-04; SW2006-07-06; SW2006-07-07; SW2006-07-12; SW2006-07-13; SW2006-07-14_1; SW2006-07-14_2; SW2006-07-15; SW2006-07-17; SW2006-07-19; SW2006-07-20; SW2006-07-21; Temperature, water; Trichodesmium, abundance expressed in number of nifH gene copies; Trichodesmium, biological trait, ratio expressed in mass of carbon per amount of nifH gene copies; Trichodesmium, biomass as carbon; Tropical Atlantic; Unicellular cyanobacteria, biomass; Unicellular cyanobacteria-A, abundance expressed in number of nifH gene copies; Unicellular cyanobacteria-B, abundance expressed in number of nifH gene copies; Unicellular cyanobacteria-B, biological trait, ratio expressed in mass of carbon per amount of nifH gene copies; Unicellular cyanobacteria-C, abundance expressed in number of nifH gene copies; Unicellular cyanobacteria-C, biological trait, ratio expressed in mass of carbon per amount of nifH gene copies; Uniform resource locator/link to source data file; VIETNAM; Water sample; WesternFlyer2005-10-25; Western tropical north Atlantic; WS; WTNA2003-04-24_01; WTNA2003-04-26; WTNA2003-05-01; WTNA2003-05-04; WTNA2003-05-11; WTNA2003-05-12; WTNA2003-05-13; WTNA2003-05-14; WTNA2003-05-18; WTNA2003-05-20
    Type: Dataset
    Format: text/tab-separated-values, 2032 data points
    Location Call Number Expected Availability
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    DATA PANGAEA
  • 6
    Electronic Resource
    Electronic Resource
    Two crystal forms of ModE, the molybdate-dependent transcriptional regulator from Escherichia coli (1999)
    Copenhagen : International Union of Crystallography (IUCr)
    Acta crystallographica 55 (1999), S. 542-543 
    Details
    ISSN: 1399-0047
    Source: Crystallography Journals Online : IUCR Backfile Archive 1948-2001
    Topics: Chemistry and Pharmacology , Geosciences , Physics
    Notes: The molybdenum-responsive ModE regulatory protein from Escherichia coli has been purified and used in crystallization trials. Two crystal forms have been observed. Form I is tetragonal, P41212 (or enantiomorph), with a = b = 72.3, c = 246.2 Å and diffracts to medium resolution. Form II is orthorhombic, P21212, with a = 82.8, b = 127.9, c = 64.0 Å and diffraction has been observed beyond 2.8 Å resolution. Structural analysis, in combination with ongoing biochemical characterization, will assist the elucidation of the structure–activity relationship in regulating the uptake of molybdate in bacteria.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1107/S0907444998011354
    Location Call Number Expected Availability
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    Paper (German National Licenses)
    Fulltext
  • 7
    Electronic Resource
    Electronic Resource
    Antiplasmodial activity of Artemisia annua plant cell cultures (1989)
    Springer
    Plant cell reports 8 (1989), S. 425-428 
    Details
    ISSN: 1432-203X
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Extracts of Artemisia annua cultures have been assessed for in vitro activity against the malarial parasite Plasmodium falciparum. Callus and suspension cells and medium were analysed and examined for their activity at different stages of growth and development. Time-course experiments were carried out to investigate the influence of various basal media, plant growth regulators and light on both growth and possible artemisinin production. Two active fractions were obtained but artemisinin was not detected.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF00270085
    Location Call Number Expected Availability
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    Paper (German National Licenses)
    Fulltext
  • 8
    Electronic Resource
    Electronic Resource
    Studies on Ailanthus altissima cell suspension cultures (1986)
    Springer
    Plant cell reports 5 (1986), S. 387-390 
    Details
    ISSN: 1432-203X
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The uptake of L-[methylene 14C]-tryptophan from culture medium and the subsequent incorporation of the radiolabel into canthin-6-one, 1-hydroxycanthin-6-one and 1-methoxycanthin-6-one has been demonstrated in cell suspension cultures of Ailanthus altissima. Efficient incorporation has been shown to depend significantly on the time of feeding. Furthermore, feeding of L-tryptophan, at levels of 500 mg/l resulted in improved alkaloid yields, particularly when fed during the lag phase of the growth cycle.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF00268609
    Location Call Number Expected Availability
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    Paper (German National Licenses)
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  • 9
    Electronic Resource
    Electronic Resource
    Studies on Ailanthus altissima cell suspension cultures. The effect of basal media on growth and alkaloid production (1987)
    Springer
    Plant cell reports 6 (1987), S. 239-241 
    Details
    ISSN: 1432-203X
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Time-course experiments have been carried out to investigate the relationship between growth and alkaloid accumulation in A. altissima cell suspension cultures. Results indicate that the type of basal medium, viz. Murashige and Skoog, Linsmaier and Skoog, Schenk and Hildebrandt or Gamborg's B5, has a significant influence on both growth and alkaloid production.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF00268489
    Location Call Number Expected Availability
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    Paper (German National Licenses)
    Fulltext
  • 10
    Electronic Resource
    Electronic Resource
    Studies on Ailanthus altissima cell suspension cultures. Uptake of L-[methyl-14C]methionine and incorporation of label into 1-methoxycanthin-6-one (1987)
    Springer
    Plant cell reports 6 (1987), S. 242-243 
    Details
    ISSN: 1432-203X
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Time-course studies of the uptake of L-[methyl 14C]-methionine have shown rapid uptake by Ailanthus altissima cells when fed at weekly stages throughout the growth cycle. The radio-label from [14C]-methionine was shown to be incorporated into 1-methoxycanthin-6-one with the highest level of incorporation being achieved with cells fed late in the growth phase.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF00268490
    Location Call Number Expected Availability
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    Paper (German National Licenses)
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