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  • 05. General::05.09. Miscellaneous::05.09.99. General or miscellaneous
  • Bacteria
  • Elsevier  (44)
  • Frontiers Media SA  (14)
  • Windermere, UK  (14)
  • Istituto Nazionale di Geofisica e Vulcanologia  (5)
  • American Chemical Society
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  • 1
    Publication Date: 2022-01-31
    Description: Biodegradation mediated by indigenous microbial communities is the ultimate fate of the majority of oil hydrocarbon that enters the marine environment. The aim of this Research Topic is to highlight recent advances in our knowledge of the pathways and controls of microbially-catalyzed hydrocarbon degradation in marine ecosystems, with emphasis on the response of microbial communities to the Deepwater Horizon oil spill in the Gulf of Mexico. In this Research Topic, we encouraged original research and reviews on the ecology of hydrocarbon-degrading bacteria, the rates and mechanisms of biodegradation, and the bioremediation of discharged oil under situ as well as near in situ conditions.
    Keywords: GC1-1581 ; QR1-502 ; Q1-390 ; Biodegradation ; Metagenomics ; oil spill ; metatran ; bacterioplankton ; Bacteria ; Gulf of Mexico ; microbial communities ; hydrocarbon ; Deepwater Horizon
    Language: English
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  • 2
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    Frontiers Media SA
    Publication Date: 2024-04-04
    Description: This eBook is a collection of articles from a Frontiers Research Topic. Frontiers Research Topics are very popular trademarks of the Frontiers Journals Series: they are collections of at least ten articles, all centered on a particular subject. With their unique mix of varied contributions from Original Research to Review Articles, Frontiers Research Topics unify the most influential researchers, the latest key findings and historical advances in a hot research area! Find out more on how to host your own Frontiers Research Topic or contribute to one as an author by contacting the Frontiers Editorial Office: frontiersin.org/about/contact
    Keywords: Bacteria ; Secretion ; Membrane ; Transport ; Protein Complex ; Pathogen ; thema EDItEUR::P Mathematics and Science::PD Science: general issues ; thema EDItEUR::M Medicine and Nursing::MK Medical specialties, branches of medicine::MKF Pathology::MKFM Medical microbiology and virology ; thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PSG Microbiology (non-medical)
    Language: English
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  • 3
    Publication Date: 2024-04-05
    Description: During spontaneous food/beverage fermentations, the microbiota associated with the raw material has a considerable importance: this microbial consortium evolves in reason of the nutrient content and of the physical, chemical, and biological determinants present in the food matrix, shaping fermentation dynamics with significant impacts on the ‘qualities’ of final productions. The selection from the indigenous micro-biodiversity of ‘virtuous’ ecotypes that coupled pro-technological and biotechnological aptitudes provide the basis for the formulation of ‘tailored’ starter cultures. In the fermenting food and beverage arena, the wine sector is generally characterized by the generation of a high added value. Together with a pronounced seasonality, this feature strongly contributes to the selection of a large group of starter cultures. In the last years, several studies contributed to describe the complexity of grapevine-associated microbiota using both culture-dependent and culture-independent approaches. The grape-associated microbial communities continuously change during the wine-making process, with different dominances that correspond to the main biotechnological steps that take place in wine. In order to simplify, following a time trend, four major dominances can be mainly considered: non-Saccharomyces, Saccharomyces, lactic acid bacteria (LAB), and spoilage microbes. The first two dominances come in succession during the alcoholic fermentation: the impact of Saccharomyces (that are responsible of key enological step of ethanol production) can be complemented/integrated by the contributions of compatible non-Saccharomyces strains. Lactic acid bacteria constitute the malolactic consortium responsible of malolactic fermentation, a microbial bioconversion often desired in wine (especially in red wine production). Finally, the fourth dominance, the undesired microbiota, represents a panel of microorganisms that, coupling spoilage potential to the resistance to the harsh conditions typical of wine environment, can cause important economic losses. In each of these four dominances a complex microbial biodiversity has been described. The studies on the enological significance of the micro-biodiversity connected with each of the four dominances highlighted the presence of a dichotomy: in each consortia there are species/strains that, in reason of their metabolisms, are able to improve wine ‘qualities’ (resource of interest in starter cultures design), and species/strains that with their metabolism are responsible of depreciation of wine. Articles describing new oenological impacts of yeasts and bacteria belonging to the four main categories above mentioned (non-Saccharomyces, Saccharomycetes, lactic acid bacteria, and spoilage microbes) are welcome. Moreover, in this Research Topic, we encourage mini-review submissions on topics of immediate interest in wine microbiology that link microbial biodiversity with positive/negative effects in wine.
    Keywords: QR1-502 ; Q1-390 ; Wine ; Yeasts ; Microbial Diversity ; Bacteria ; Safety ; alcoholic fermentation ; malolactic fermentation ; grapes ; quality ; thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PSG Microbiology (non-medical)
    Language: English
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  • 4
    Publication Date: 2024-04-05
    Description: The most common quorum sensing (QS) system in Gram-negative bacteria occurs via N-acyl homoserine lactone (AHLs) signals. An archetypical system consists of a LuxI-family protein synthesizing the AHL signal which binds at quorum concentrations to the cognate LuxR-family transcription factors which then control gene expression by binding to specific sequences in target gene promoters. QS LuxR-family proteins are approximately 250 amino acids long and made up of two domains; at the N-terminus there is an autoinducer-binding domain whereas the C-terminus contains a DNA-binding helix-turn-helix (HTH) domain. QS LuxRs display surprisingly low similarities (18-25%) even if they respond to structurally similar AHLs. 95% of LuxRs share 9 highly conserved amino acid residues; six of these are hydrophobic or aromatic and form the cavity of the AHL-binding domain and the remaining three are in the HTH domain. With only very few exceptions, the luxI/R cognate genes of AHL QS systems are located adjacent to each other. The sequencing of many bacterial genomes has revealed that many proteobacteria also possess LuxRs that do not have a cognate LuxI protein associated with them. These LuxRs have been called orphans and more recently solos. LuxR solos are widespread in proteobacterial species that possess a canonical complete AHL QS system as well as in species that do not. In many cases more than one LuxR solo is present in a bacterial genome. Scientists are beginning to investigate these solos. Are solos responding to AHL signals? If present in a bacterium which possesses a canonical AHL QS system are solos an integral part of the regulatory circuit? Are LuxR solos eavesdropping on AHLs produced by neighboring bacteria? Have they evolved to respond to different signals instead of AHLs, and are these signals endogenously produced or exogenously provided? Are they involved in interkingdom signaling by responding to eukaryotic signals? Recent studies have revealed that LuxR solos are involved in several mechanisms of cell-cell communication in bacteria implicating them in bacterial intraspecies and interspecies communication as well as in interkingdom signaling by responding to molecules produced by eukaryotes. LuxR solos are likely to become major players in signaling since they are widespread among proteobacterial genomes and because initial studies highlight their different roles in bacterial communication. This Research Topic allows scientists studying or interested in LuxR solos to report their data and/or express their hypotheses and thoughts on this important and currently understudied family of signaling proteins.
    Keywords: QH301-705.5 ; Q1-390 ; LuxR solos ; Quorum Sensing ; signaling ; AHL ; Bacteria ; thema EDItEUR::P Mathematics and Science::PS Biology, life sciences
    Language: English
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  • 5
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    Frontiers Media SA
    Publication Date: 2024-04-05
    Description: Proteins suffer many conformational changes and interactions through their life, from their synthesis at ribosomes to their controlled degradation. Only folded and soluble proteins are functional. Thus, protein folding and solubility are controlled genetically, transcriptionally, and at the protein sequence level. In addition, a well-conserved cellular machinery assists the folding of polypeptides to avoid misfolding and ensure the attainment of soluble and functional structures. When these redundant protective strategies are overcome, misfolded proteins are recruited into aggregates. Recombinant protein production is an essential tool for the biotechnology industry and also supports expanding areas of basic and biomedical research, including structural genomics and proteomics. Although bacteria still represent a convenient production system, many recombinant polypeptides produced in prokaryotic hosts undergo irregular or incomplete folding processes that usually result in their accumulation as insoluble aggregates, narrowing thus the spectrum of protein-based drugs that are available in the biotechnology market. In fact, the solubility of bacterially produced proteins is of major concern in production processes, and many orthogonal strategies have been exploited to try to increase soluble protein yields. Importantly, contrary to the usual assumption that the bacterial aggregates formed during protein production are totally inactive, the presence of a fraction of molecules in a native-like structure in these assemblies endorse them with a certain degree of biological activity, a property that is allowing the use of bacteria as factories to produce new functional materials and catalysts. The protein embedded in intracellular bacterial deposits might display different conformations, but they are usually enriched in beta-sheet-rich assemblies resembling the amyloid fibrils characteristic of several human neurodegenerative diseases. This makes bacterial cells simple, but biologically relevant model systems to address the mechanisms behind amyloid formation and the cellular impact of protein aggregates. Interestingly, bacteria also exploit the structural principles behind amyloid formation for functional purposes such as adhesion or cytotoxicity. In the present research topic we collect papers addressing all the issues mentioned above from both the experimental and computational point of view.
    Keywords: QR1-502 ; Q1-390 ; protein aggregation ; bacterial chaperones ; Bacteria ; Functional amyloids ; protein expression ; Protein Folding ; Prion-like proteins ; thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PSG Microbiology (non-medical)
    Language: English
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  • 6
    Publication Date: 2024-04-05
    Description: According to the World Health Organization (WHO), in 2012 infectious diseases and related conditions account for more than 70% of premature deaths across 22 African countries and estimated 450 000 people worldwide developed multi-drug resistant tuberculosis. This alarming situation, of great public health concern, calls for the urgent development of novel and efficient responding strategies. The employment of important research platforms, such as genomics and proteomics, has contributed significant insight into the mechanisms underlying microbial infection and microbe-host interaction. In this Frontiers Research Topic, we aim to produce a timely and pertinent discussion regarding the current status of “Proteomics of microbial Human pathogens” and the role of proteomics in combating the challenges posed by microbial infection and indeed acquired anti-microbial resistance. As the field of proteomics progressed from 2-DE gel based approaches to modern LC-MS/MS based workflows, remarkable advances have been reported in terms of data quantity and quality. Given the immediate and enormous advantages that high resolution and accurate mass spectrometers have brought to the field, proteomics has now evolved into a robust platform capable of generating large amounts of comprehensive data comparable to that reported previously in genomics studies. For example, detection of the complete yeast proteome has been reported and other small proteomes, such as those of bacteria, are within reach. Mass spectrometry-based proteomics has become an essential tool for biologists and biochemists, and is now considered by many as an essential component of modern structural biology. Additionally, the introduction of high-resolution mass spectrometers has driven the development of various different strategies aimed at accurate quantification of absolute and relative amount of protein(s) of interest. Emerging targeted mass spectrometry methodologies such as; Selected Reaction Monitoring (SRM), Parallel Reaction Monitoring (PRM) and SWATH, are perhaps the latest breakthrough within the proteomics community. Indeed, through a label free approach, targeted mass spectrometry offers an unequalled capability to characterize and quantify a specific set of proteins reproducibility, in any biological sample. Usefully, Aebersold and colleagues have recently generated and validated a number of assays to quantify 97% of the 4,012 annotated Mycobacterium tuberculosis (Mtb) proteins by SRM. As such, the Mtb Proteome library represents a valuable experimental resource that will undoubtedly bring new insight to the complex life cycle of Mtb. Finally, as reviewed recently in Frontiers Research Topic, mass spectrometry-based proteomics has had a tremendous impact on our current understanding of post translational modification (PTM) in bacteria including the key role of PTMs during interaction of pathogenic bacteria and host interactions. We believe that our understanding of microbial Human pathogens has benefited enormously from both 2-DE gel and modern LC-MS/MS based proteomics. It is our wish to produce an integrated discussion surrounding this topic to highlight the existing synergy between these research fields. We envisage this Research Topic as a window to expert opinions and perspectives on the realistic practicalities of proteomics as an important tool to address healthcare problems caused by microbial pathogens.
    Keywords: QR1-502 ; Q1-390 ; Mass Spectrometry ; Proteomics ; infectious diseases ; Bacteria ; pathogen ; Microbes ; Protein posttranslational modifications ; thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PSG Microbiology (non-medical)
    Language: English
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  • 7
    Publication Date: 2024-04-04
    Description: This eBook is a collection of articles from a Frontiers Research Topic. Frontiers Research Topics are very popular trademarks of the Frontiers Journals Series: they are collections of at least ten articles, all centered on a particular subject. With their unique mix of varied contributions from Original Research to Review Articles, Frontiers Research Topics unify the most influential researchers, the latest key findings and historical advances in a hot research area! Find out more on how to host your own Frontiers Research Topic or contribute to one as an author by contacting the Frontiers Editorial Office: frontiersin.org/about/contact
    Keywords: Alzheimer's disease ; Amyloid ; Bacteria ; Infection ; Spirochetes ; Dementia ; Pathogens ; Biofilm ; Senile plaque ; Beta amyloid ; Tau ; Inflammation ; Bacterial amyloid ; HSV1 ; Virus ; thema EDItEUR::P Mathematics and Science::PD Science: general issues ; thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PSA Life sciences: general issues::PSAN Neurosciences
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  • 8
    Publication Date: 2024-04-05
    Description: This eBook presents all 10 articles published under the Frontiers Research Topic "Evolutionary Feedbacks Between Population Biology and Genome Architecture", edited by Scott V. Edwards and Tariq Ezaz. With the rise of rapid genome sequencing across the Tree of Life, challenges arise in understanding the major evolutionary forces influencing the structure of microbial and eukaryotic genomes, in particular the prevalence of natural selection versus genetic drift in shaping those genomes. Additional complexities in understanding genome architecture arise with the increasing incidence of interspecific hybridization as a force for shaping genotypes and phenotypes. A key paradigm shift facilitating a more nuanced interpretation of genomes came with the rise of the nearly neutral theory in the 1970s, followed by a greater appreciation for the contribution of nonadaptive forces such as genetic drift to genome structure in the 1990s and 2000s. The articles published in this eBook grapple with these issues and provide an update as to the ways in which modern population genetics and genome informatics deepen our understanding of the subtle interplay between these myriad forces. From intraspecific to macroevolutionary studies, population biology and population genetics are now major tools for understanding the broad landscape of how genomes evolve across the Tree of Life. This volume is a celebration across diverse taxa of the contributions of population genetics thinking to genome studies. We hope it spurs additional research and clarity in the ongoing search for rules governing the evolution of genomes.
    Keywords: QK1-989 ; Q1-390 ; Genetic Drift ; intron ; natural selection ; gene ; plant ; vertebrate ; Bacteria ; Sex Chromosomes ; Genome ; thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PST Botany and plant sciences
    Language: English
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  • 9
    Publication Date: 2023-12-20
    Description: Periodontitis is an infection-induced inflammatory disease of the tooth supporting tissues. Treatment of periodontal diseases and regeneration of the effected tissues can be possible only in the early diagnosis of the disease. If left undiagnosed or untreated, periodontitis leads to irreversible soft and hard tissue destruction and finally to tooth loss. Saliva is known to contain inflammatory mediators, host tissue and cell degradation products as well as microbial metabolites and enzymes, reflecting the health status of the oral cavity. In this topic, in collaboration with the well-known scientists working on the field of salivary diagnostics, we demonstrate evidence on monitoring periodontitis by salivary analysis.
    Keywords: Q1-390 ; RC109-216 ; host response ; Chair-side ; diagnostics ; Periodontal disease ; Salivary ; Bacteria ; bic Book Industry Communication::G Reference, information & interdisciplinary subjects::GP Research & information: general
    Language: English
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  • 10
    Publication Date: 2023-12-21
    Description: In recent years there has been a substantial increase in the number of diseases with the inflammatory component such as such as allergy, asthma, rheumatoid arthritis, inflammatory bowl disease (IBD, which includes ulcerative colitis and Crohn's disease), chronic sinusitis, and many other conditions. The majority of these diseases are multifactorial, with the contribution of genetic and environmental factors. Among the latter, the role of certain microorganisms and viruses in triggering or sustaining the inflammatory process is most controversial. In rheumatoid arthritis, for example, the following bacteria and viruses have been implicated in triggering the disease: Mycoplasma spp., Proteus mirabilis, Escherichia coli, Staphylococcus spp., Bordetella spp., Acinetobacter spp., the parvoviruses, Epstein-Barr virus, and retroviruses. The list of putative microbial triggers of rheumatoid arthritis is still growing, and it becomes essentially impossible to make a causation link between certain infectious agents and the disease. In the light of these disappointing results there are calls for even larger studies with the use of more advanced and large-scale technologies. The primary function of the immune system is the maintenance of body homeostasis and protection against any threats to it via several lines of elaborate and complex immune defense. Given even higher complexity that involves the microbiota and the corresponding host-microbe interaction, the conditions for this equilibrium become even more challenging. In the absence of a defined pathogen, for example, the spectrum of microorganisms involved in triggering inappropriate immune responses may include polymicrobial communities or the cumulative effect of several microbial/viral factors. Under the normal circumstances there is a fine-tuned balance between commensal microbiota and the host’s immune responses. However, when this balance is compromised, for example in IBD, a massive immune response is launched against commensal microbiota resulting in chronic inflammation. Besides the microbial/viral factors, the balance of the immune system can be compromised by other causes. Given, for example, the close and inclusive interaction of the immune, nervous and endocrine systems, the list of these provoking factors can expand even more. For instance, it has been demonstrated that even mild sleep deprivation may increase the production of interleukin-6 and C-reactive protein. Understanding the complex role of microbial and environmental factors in inflammatory and autoimmune diseases, therefore, is the main subject of this topic.
    Keywords: R5-920 ; RC581-607 ; QR1-502 ; Q1-390 ; environment ; Autoimmune ecology ; Silica exposure ; Rheumatoid arthritis ; Viruses ; Bacteria ; bic Book Industry Communication::M Medicine
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  • 11
    Publication Date: 2024-04-05
    Description: Post-translational modifications (PTMs) are widely employed by all living organisms to control the enzymatic activity, localization or stability of proteins on a much shorter time scale than the transcriptional control. In eukarya, global analyses consistently reveal that proteins are very extensively phosphorylated, acetylated and ubiquitylated. Glycosylation and methylation are also very common, and myriad other PTMs, most with a proven regulatory potential, are being discovered continuously. The emergent picture is that PTM sites on a single protein are not independent; modification of one residue often affects (positively or negatively) modification of other sites on the same protein. The best example of this complex behavior is the histone “bar-code” with very extensive cross-talk between phosphorylation, acetylation and methylation sites. Traditionally it was believed that large networks of PTMs exist only in complex eukaryal cells, which exploit them for coordination and fine-tuning of various cellular functions. PTMs have also been detected in bacteria, but the early examples focused on a few important regulatory events, based mainly on protein phosphorylation. The global importance (and abundance) of PTMs in bacterial physiology was systematically underestimated. In recent years, global studies have reported large datasets of phosphorylated, acetylated and glycosylated proteins in bacteria. Other modifications of bacterial proteins have been recently described: pupylation, methylation, sirtuin acetylation, lipidation, carboxylation and bacillithiolation. As the landscape of PTMs in bacterial cells is rapidly expanding, primarily due to advances of detection methods in mass spectrometry, our research field is adapting to comprehend the potential impact of these modifications on the cellular physiology. The field of protein phosphorylation, especially of the Ser/Thr/Tyr type, has been profoundly transformed. We have become aware that bacterial kinases phosphorylate many protein substrates and thus constitute regulatory nodes with potential for signal integration. They also engage in cross-talk and eukaryal-like mutual activation cascades. The regulatory potential of protein acetylation and glycosylation in bacteria is also rapidly emerging, and the cross-talk between acetylation and phosphorylation has been documented. This topic deals with the complexity of the PTM landscape in bacteria, and focus in particular on the physiological roles that PTMs play and methods to study them. The topic is associated to the 1st International Conference on Post-Translational Modifications in Bacteria (September 9-10, 2014, Göttingen, Germany).
    Keywords: QR1-502 ; Q1-390 ; Infection ; Phosphorylation ; Hydroxylation ; Protein Kinases ; S-thiolation ; Proteomics ; Bacteria ; Dehydration ; N-glycosylation ; antimicrobial peptides ; thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PSG Microbiology (non-medical)
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  • 12
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    Frontiers Media SA
    Publication Date: 2024-04-05
    Description: DNA replication, a central event for cell proliferation, is the basis of biological inheritance. Complete and accurate DNA replication is integral to the maintenance of the genetic integrity of organisms. In all three domains of life, DNA replication begins at replication origins. In bacteria, replication typically initiates from a single replication origin (oriC), which contains several DnaA boxes and the AT-rich DNA unwinding element (DUE). In eukaryotic genomes, replication initiates from significantly more replication origins, activated simultaneously at a specific time. For eukaryotic organisms, replication origins are best characterized in the unicellular eukaryote budding yeast Saccharomyces cerevisiae and the fission yeast Schizosaccharomyces pombe. The budding yeast origins contain an essential sequence element called the ARS (autonomously replicating sequence), while the fission yeast origins consist of AT-rich sequences. Within the archaeal domain, the multiple replication origins have been identified by a predict-and-verify approach in the hyperthermophilic archaeon Sulfolobus. The basic structure of replication origins is conserved among archaea, typically including an AT-rich unwinding region flanked by several short repetitive DNA sequences, known as origin recognition boxes (ORBs). It appears that archaea have a simplified version of the eukaryotic replication apparatus, which has led to considerable interest in the archaeal machinery as a model of that in eukaryotes. The research on replication origins is important not only in providing insights into the structure and function of the replication origins but also in understanding the regulatory mechanisms of the initiation step in DNA replication. Therefore, intensive studies have been carried out in the last two decades. The pioneer work to identify bacterial oriCs in silico is the GC-skew analysis. Later, a method of cumulative GC skew without sliding windows was proposed to give better resolution. Meanwhile, an oligomer-skew method was also proposed to predict oriC regions in bacterial genomes. As a unique representation of a DNA sequence, the Z-curve method has been proved to be an accurate and effective approach to predict bacterial and archaeal replication origins. Budding yeast origins have been predicted by Oriscan using similarity to the characterized ones, while the fission yeast origins have been identified initially from AT content calculation. In comparison with the in silico analysis, the experimental methods are time-consuming and labor-intensive, but convincing and reliable. To identify microbial replication origins in vivo or in vitro, a number of experimental methods have been used including construction of replicative oriC plasmids, microarray-based or high-throughput sequencing-based marker frequency analysis, two-dimensional gel electrophoresis analysis and replication initiation point mapping (RIP mapping). The recent genome-wide approaches to identify and characterize replication origin locations have boosted the number of mapped yeast replication origins. In addition, the availability of increasing complete microbial genomes and emerging approaches has created challenges and opportunities for identification of their replication origins in silico, as well as in vivo and in vitro. The Frontiers in Microbiology Research Topic on DNA replication origins in microbial genomes is devoted to address the issues mentioned above, and aims to provide a comprehensive overview of current research in this field.
    Keywords: QR1-502 ; Q1-390 ; orisome ; Replication Origin ; Cell-cycle ; Archaea ; origin recognition complex (ORC) ; Bacteria ; DNA Replication ; Replication regulation ; yeast ; Regulatory proteins ; thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PSG Microbiology (non-medical)
    Language: English
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  • 13
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    Frontiers Media SA
    Publication Date: 2023-12-21
    Description: The Nod-like receptor (NLR) family of proteins are evolutionary conserved molecules that in plants and mammals have been implicated in innate immune sensing of microbes and infection-associated physiological changes, contributing to immune protection of the challenged host organism through the instruction of inflammatory responses, antimicrobial defense and adaptive immunity. Recent data however suggests that the biological roles of NLR go beyond the function of classical pattern recognition molecules (PRM) as they have been implicated in essential cellular processes including autophagy, apoptosis, modification of signal transduction and gene transcription as well as reproductive biology. In this research topic, we aim to provide a comprehensive state-of the art overview of the emerging functions of NLR in plant and mammalian immunity, cell biology and reproductive biology. Potential topics may include, but are not limited to the following areas: • Functions of NLRs as PRMs in infection • Cross-talk of NLRs with other PRMs • Signal transduction pathways of NLRs • New functions of NLRs other than pattern recognition • Structural aspects of NLR activation • Mechanisms of NLRs in cell biological processes • Aspects of NLRs in reproductive biology • Functions of NLRs in plant immune responses
    Keywords: R5-920 ; RC581-607 ; Adaptive Immunity ; PAMP ; pathogens ; MAMP ; innate immunity ; Bacteria ; Sensing ; virus ; LRR ; DAMP ; bic Book Industry Communication::M Medicine
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  • 14
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    Frontiers Media SA
    Publication Date: 2024-04-11
    Description: This eBook is a collection of articles from a Frontiers Research Topic. Frontiers Research Topics are very popular trademarks of the Frontiers Journals Series: they are collections of at least ten articles, all centered on a particular subject. With their unique mix of varied contributions from Original Research to Review Articles, Frontiers Research Topics unify the most influential researchers, the latest key findings and historical advances in a hot research area! Find out more on how to host your own Frontiers Research Topic or contribute to one as an author by contacting the Frontiers Editorial Office: frontiersin.org/about/contact
    Keywords: Airborne ; Andean highland ; Bacteria ; fish ; hydrothermal vent ; hot spring ; microorganisms ; Plants ; thema EDItEUR::T Technology, Engineering, Agriculture, Industrial processes::TN Civil engineering, surveying and building ; thema EDItEUR::T Technology, Engineering, Agriculture, Industrial processes::TC Biochemical engineering::TCB Biotechnology
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  • 15
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    Freshwater Biological Association | Windermere, UK
    In:  http://aquaticcommons.org/id/eprint/4787 | 1256 | 2011-09-29 15:54:01 | 4787 | Freshwater Biological Association
    Publication Date: 2021-07-06
    Description: Many sides of the biology of Polyphemus pediculus are adequately studied at the present time. Most complicated is the question of its feeding. Dissection does not give an idea of the composition of the food, since Polyphemus strongly grinds its food with its mandibles. For clarification of the composition of the food of Polyphemus pediculus, the authors carried out in July and August 1962 a series of experiments with the application of radio-carbon methods in order to judge the degree of utilization of one or other foods by the quantity of C14, accumulated in the body of the crustacean after feeding. Particular attention in these experiments was given to the question of the possibility of the utilization by polyphemus of plant food - bacteria, algae and detritus.
    Description: Translated from Russian into English
    Keywords: Biology ; Ecology ; Limnology ; Freshwater crustaceans ; Food composition ; Feeding ; Algae ; Carbon 14 ; Bacteria ; Detritus ; Polyphemus pediculus
    Repository Name: AquaDocs
    Type: monograph
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  • 16
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    Freshwater Biological Association | Windermere, UK
    In:  http://aquaticcommons.org/id/eprint/4793 | 1256 | 2011-09-29 15:52:47 | 4793 | Freshwater Biological Association
    Publication Date: 2021-07-06
    Description: Recent research has shown that the biomass of bacteria in lakes and other water-bodies can attain significant values. The huge production of bacteria is brought about by their great rate of reproduction. In a series of cases their biomass exceeds the biomass of phytoplankton. Therefore in a study of the biological productivity of water bodies it is necessary to calculate the biomass and production not only of the phyto- and zooplankton, but also of bacteria.The authors uses different methods and formulae to to compare the time of one generation of the bacteria.
    Description: Translated from Russian into English
    Keywords: Biology ; Ecology ; Limnology ; Bacteria ; Biomass ; Formulae ; Growth rate ; Russia ; Lake Batorin
    Repository Name: AquaDocs
    Type: monograph
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  • 17
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    Freshwater Biological Association | Windermere, UK
    In:  http://aquaticcommons.org/id/eprint/4812 | 1256 | 2011-09-29 15:51:26 | 4812 | Freshwater Biological Association
    Publication Date: 2021-07-06
    Description: By now a great deal of work is known concerning the methods of determining the production of bacteria or similar questions; among these the problems of a common terminology is discussed. The article discusses formulae of production of bacterial populations over time.
    Description: Translated into English
    Keywords: Biology ; Limnology ; Bacteria ; Population number ; Formulae ; Terminology
    Repository Name: AquaDocs
    Type: monograph
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  • 18
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    Freshwater Biological Association | Windermere, UK
    In:  http://aquaticcommons.org/id/eprint/4844 | 1256 | 2011-09-29 15:49:32 | 4844 | Freshwater Biological Association
    Publication Date: 2021-07-06
    Description: A modified method of the Biochemical oxygen demand (BOD)test was applied in order to find out the seasonal changing activity of the nitrifying bacteria in surface waters. Samples were taken from the River Elbe near Teufelsbrueck.
    Description: Translated from German into English
    Keywords: Ecology ; Limnology ; Experimental research ; Dissolved oxygen ; Analytical techniques ; Water analysis ; Nitrification ; Bacteria ; Surface water
    Repository Name: AquaDocs
    Type: monograph
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  • 19
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    Freshwater Biological Association | Windermere, UK
    In:  http://aquaticcommons.org/id/eprint/4848 | 1256 | 2011-09-29 15:49:18 | 4848 | Freshwater Biological Association
    Publication Date: 2021-07-06
    Description: When dissolved in water, compounds of nitrogen and phosphorus ought to contain the basic assimilated food requirements for autotrophic plants and therefore autotrophic algae. This article summarises the occurrence of nitrogen in water, how species of algae utilize nitrogen and phosphorus forms for growth and the capacities of algae to adapt to environments of different nutrient wealth. This topic has unquestionable importance not only for the purpose of survival of a species but also in deciding indirectly about the stability of ecosystems.
    Description: Translated from Polish into English
    Keywords: Biology ; Chemistry ; Limnology ; Algae ; Nitrogen fixation ; Nitrogen ; Phosphorus ; Nutritional requirements ; Bacteria ; Organic compounds
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    Freshwater Biological Association | Windermere, UK
    In:  http://aquaticcommons.org/id/eprint/4856 | 1256 | 2011-09-29 15:48:26 | 4856 | Freshwater Biological Association
    Publication Date: 2021-07-06
    Description: Pseudomonas aeruginosa has for some time been known as a denitrifier. Pseudomonas aeruginosa was chosen for further studies, because P. aeruginosa occurs abundantly in Plusssee and moreover there are contradictory assertions on the gas products of denitrification by this bacteria. In experimental research the pattern of growth and gas production of Pseudomonas aeruginosa on nutrient broth was studied.
    Description: Translated from German into English
    Keywords: Chemistry ; Ecology ; Limnology ; Experimental research ; Bacteria ; Freshwater lakes ; Growth ; Microbiological culture ; Plusssee
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    Type: monograph
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    Freshwater Biological Association | Windermere, UK
    In:  http://aquaticcommons.org/id/eprint/4850 | 1256 | 2011-09-29 15:48:48 | 4850 | Freshwater Biological Association
    Publication Date: 2021-07-06
    Description: In a lake the nitrogen compounds are liable to regular cycling in which nitrate is reduced and ammonium oxidised. As a nitrate maximum is regularly established in the upper part of the hypolimnion of a stratified summer lake, the authors have dealt in particular with the oxidising side of the nitrogen cycle. Described here are partial results of the nitrification in Plusssee. The Plusssee was chosen, since it is almost entirely without inflows, and, lying in a wooded basin, is well protected from the wind, and therefore stably stratified. In order to determine the number of autotrophic nitrificants the distribution of the Nitrosomonas and Nitrobacter spores in the lake were analysed. From the estimates on the determination of spore numbers of the heterotrophic nitrificants, 14 species in the pure culture were isolated and examined from morphological, biochemical and taxonomic viewpoints.
    Description: Translated from German into English
    Keywords: Ecology ; Limnology ; Bacteria ; Ammonia ; Freshwater lakes ; Nitrification ; Nitrogen cycle
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    Type: monograph
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    Freshwater Biological Association | Windermere, UK
    In:  http://aquaticcommons.org/id/eprint/4884 | 1256 | 2011-09-29 15:46:23 | 4884 | Freshwater Biological Association
    Publication Date: 2021-07-07
    Description: The radioautographic method of determination of the number of autotrophic microorganisms was initially suggested for counting methane-oxidizing bacteria. With the help of this method colonies of hydrogen-oxidizing bacteria are differentiated even more clearly from heterotrophic. Under laboratory conditions it was shown that colonies grown on membrane filters from a pure culture of thionic bacteria on a nutrient medium with radio- active carbonate, give better prints on film. This method was tested by the authors for determining the number of these bacteria in the meromictic Lake Vae de San Juan during the expedition to Cuba in the summer of 1973. The study showed that that the thionic bacteria are found throughout the pelagial. It proved that the thionic bacteria can be well considered in water-bodies by the radioautographic method.
    Description: Translated from Russian into English
    Keywords: Ecology ; Limnology ; Freshwater lakes ; Photography ; Bacteria ; Methodology ; Analytical techniques ; Cuba
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    Freshwater Biological Association | Windermere, UK
    In:  http://aquaticcommons.org/id/eprint/4903 | 1256 | 2011-09-29 15:44:11 | 4903 | Freshwater Biological Association
    Publication Date: 2021-07-07
    Description: Description of a simple method for counting bacteria with active electron transport systems in water and sediment samples. Sodium succinate, NADH and NADPH served as electron donors. It is possible to see several sites of electron transport in the larger cells. Especially impressive are the plankton-algae, protozoa, and small metazoa. This is a partial translation of the ”method” section only.
    Description: Translated from German into English
    Keywords: Biology ; Limnology ; Water samples ; Bacteria ; Bacterial counters ; Bacterial filtration ; Methodology
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    Freshwater Biological Association | Windermere, UK
    In:  http://aquaticcommons.org/id/eprint/4964 | 1256 | 2011-09-29 15:39:04 | 4964 | Freshwater Biological Association
    Publication Date: 2021-07-07
    Description: The nitrification in the ocean is influenced by several environmental factors and the importance of these is more or less known. There are very likely many more to be discovered in the study of the interaction of nitrification bacteria and other micro-organisms in the ocean. Some of the factors to be considered will briefly be dealt with in this paper. Then the authors give the results of an incubation experiment in the Baltic Sea and from a detailed study in Gullmarn.
    Description: Translated from Swedish into English
    Keywords: Chemistry ; Ecology ; Oceanography ; Marine ecology ; Nitrification ; Experimental research ; Sediment analysis ; Bacteria ; Carbon fixation ; Nitrosococcus oceanus ; Nitrococcus mobilis
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    Freshwater Biological Association | Windermere, UK
    In:  http://aquaticcommons.org/id/eprint/4967 | 1256 | 2011-09-29 15:36:52 | 4967 | Freshwater Biological Association
    Publication Date: 2021-07-07
    Description: Utilization of the heavy isotope of nitrogen as a tracer has found numerous applications in soil biology. It allows better definition of different stages of the nitrogen cycle, in particular the immobilization-mineralization cycle. In this work, the authors report the results of calculations of natural isotope ratios of nitrogen in samples of water, soil and vegetation prevailing in Dombes and discuss the possibilities of errors and coefficients of fractionation.
    Description: Translated from French into English
    Keywords: Chemistry ; Ecology ; Limnology ; Nitrogen isotopes ; Soils ; Tracers ; Bacteria ; Nitrogen compounds ; France ; Dombes
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    Freshwater Biological Association | Windermere, UK
    In:  http://aquaticcommons.org/id/eprint/4975 | 1256 | 2011-09-29 15:37:31 | 4975 | Freshwater Biological Association
    Publication Date: 2021-07-07
    Description: Despite the fact that it is a long time sinc e the methods of collection and quantitative estimatio n of protozoa were worked out data on the abundance of these animals in freshwaters are not very numerous. Nevertheless, Infusoria and Rhizopoda at high densities are widespread in the water and sediments of lakes and reservoirs. In order to find ou t the importance of infusoria as a food source for cyclopoids we carried out experimental investigations using C14. For this three species of cyclopoids, widely distributed in open regions of Rybinsk reservoir were selected: Cyclops vicinus, Mesocyclops oithonoides and Kesocyclops leuckarti. The data presented give evidence that the species investigated are able as predators to consume infusorian plankton arid bacteria in the form of flocs or small clumps of detritus.
    Description: Translated from Russian into English
    Keywords: Ecology ; Limnology ; Freshwater lakes ; Freshwater crustaceans ; Feeding experiments ; Bacteria ; Feeding ; Russia ; Cyclops vicinus ; Mesocyclops oithonoides ; Kesocyclops leuckarti
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    Freshwater Biological Association | Windermere, UK
    In:  http://aquaticcommons.org/id/eprint/5047 | 1256 | 2011-09-29 15:28:19 | 5047 | Freshwater Biological Association
    Publication Date: 2021-07-08
    Description: Laboratory research was done in order to study the feeding of larval Cricotopus silvestris F. in relation to characters of structure of oral apparatus. Results of the experiments are summarised and the oral apparatus morhologically described.
    Description: Translated from Russian into English
    Keywords: Biology ; Limnology ; Freshwater lakes ; Zooplankton ; Nutrition ; Carbon 14 ; Bacteria ; Algae ; Russia ; Asplanchna priodonta ; Asplanchna herricki
    Repository Name: AquaDocs
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    Freshwater Biological Association | Windermere, UK
    In:  http://aquaticcommons.org/id/eprint/5064 | 1256 | 2011-09-29 15:30:02 | 5064 | Freshwater Biological Association
    Publication Date: 2021-07-08
    Description: The morphology, increase and systematica of Sphaerotilus natans is studied and culture methods examined.
    Description: Translated from German into English
    Keywords: Biology ; Limnology ; Bacteria ; Bacteriology ; Identification ; Experimental culture ; Laboratory culture ; Methodology
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  • 29
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Gosselin, K. M., Nelson, R. K., Spivak, A. C., Sylva, S. P., Van Mooy, B. A. S., Aeppli, C., Sharpless, C. M., O’Neil, G. W., Arrington, E. C., Reddy, C. M., & Valentine, D. L. Production of two highly abundant 2-methyl-branched fatty acids by blooms of the globally significant marine cyanobacteria Trichodesmium erythraeum. ACS Omega, 6(35), (2021): 22803–22810, https://doi.org/10.1021/acsomega.1c03196.
    Description: The bloom-forming cyanobacteria Trichodesmium contribute up to 30% to the total fixed nitrogen in the global oceans and thereby drive substantial productivity. On an expedition in the Gulf of Mexico, we observed and sampled surface slicks, some of which included dense blooms of Trichodesmium erythraeum. These bloom samples contained abundant and atypical free fatty acids, identified here as 2-methyldecanoic acid and 2-methyldodecanoic acid. The high abundance and unusual branching pattern of these compounds suggest that they may play a specific role in this globally important organism.
    Description: This work was funded with grants from the National Science Foundation grants OCE-1333148, OCE-1333162, and OCE-1756254 and the Woods Hole Oceanographic Institution (IR&D). GCxGC analysis made possible by WHOI’s Investment in Science Fund.
    Keywords: Lipids ; Alkyls ; Bacteria ; Genetics ; Chromatography
    Repository Name: Woods Hole Open Access Server
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  • 30
    Publication Date: 2020-02-24
    Description: The time for a first book on Geoethics has come. The faster, greedier pace of society and globalization demands it. The comfortable life of scholars in the ivory tower is coming to a rude awakening. People demand understandable information on geohazards, judges condemn scientist and engineers for lack of communication, indigenous people rise in anger accusing experts of misleading them, attempts to avoid transparency in developments still exist, the helplessness of technology to deal with nuclear waste becomes more evident everyday and nature exposes shortcuts in constructing critical facilities with her own awesome force.....
    Description: Published
    Description: XXI-XXII
    Description: 3T. Pericolosità sismica e contributo alla definizione del rischio
    Description: 4V. Vulcani e ambiente
    Description: 4A. Clima e Oceani
    Description: 5A. Energia e georisorse
    Description: 6A. Monitoraggio ambientale, sicurezza e territorio
    Description: reserved
    Keywords: Geoethics ; Philosophy ; Geosciences ; Geoscientists ; Ethics ; Earth Sciences ; Sustainability ; Research Integrity ; Professional Ethics ; Geoscience communication ; Responsibility ; Stewardship ; Planet ; Earth ; 05. General::05.03. Educational, History of Science, Public Issues::05.03.99. General or miscellaneous ; 05. General::05.08. Risk::05.08.99. General or miscellaneous ; 05. General::05.09. Miscellaneous::05.09.99. General or miscellaneous
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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    Publication Date: 2017-04-04
    Description: Key Features. Written by a global group of contributors with backgrounds ranging from philosopher to geo-practitioner, providing a balance of voices. Includes case studies, showing where experts have gone wrong and where key organizations have ignored facts, wanting assessments favorable to their agendas. Provides a much needed basis for discussion to guide scientists to consider their responsibilities and to improve communication with the public. Description. Edited by two experts in the area, Geoethics: Ethical Challenges and Case Studies in Earth Sciences addresses a range of topics surrounding the concept of ethics in geoscience, making it an important reference for any Earth scientist with a growing concern for sustainable development and social responsibility. This book will provide the reader with some obvious and some hidden information you need for understanding where experts have not served the public, what more could have been done to reach and serve the public and the ethical issues surrounding the Earth Sciences, from a global perspective. Table of contents. Section 1: Introduction Section 2: Philosophical reflections Section 3: The ethics of practice Section 4: Man made hazards Section 5: Natural hazards Section 6: Exploitation of resources Section 7: Low income and indigenous communities Section 8: Geoscience community
    Description: Published
    Description: 3T. Pericolosità sismica e contributo alla definizione del rischio
    Description: 5T. Sorveglianza sismica e operatività post-terremoto
    Description: 4V. Vulcani e ambiente
    Description: 5V. Sorveglianza vulcanica ed emergenze
    Description: 4A. Clima e Oceani
    Description: 6A. Monitoraggio ambientale, sicurezza e territorio
    Description: open
    Keywords: Geoethics ; Philosophy ; Natural hazards ; Man made hazards ; Georesources ; Low income countries ; Geoscience community ; Communication ; Geoeducation ; Natural risks ; 04. Solid Earth::04.06. Seismology::04.06.11. Seismic risk ; 04. Solid Earth::04.08. Volcanology::04.08.08. Volcanic risk ; 05. General::05.03. Educational, History of Science, Public Issues::05.03.99. General or miscellaneous ; 05. General::05.08. Risk::05.08.99. General or miscellaneous ; 05. General::05.09. Miscellaneous::05.09.99. General or miscellaneous
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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    Elsevier
    Publication Date: 2017-04-04
    Description: This chapter outlines a framework of the issues addressed by geoethics. Starting from an etymological analysis of the word “geoethics,” we identify the cultural basis on which to expand the debate on geoethics, while also proposing for consideration by the scientific community some questions that may guide the development of future research and practice in geosciences. We attempt to define some fundamental points that, in our opinion, will strengthen geoethics and help its development. The goal of geoethics is to suggest practical solutions and provide useful techniques, and also to promote cultural renewal in how humans perceive and relate to the planet, through greater attention to the protection of life and the richness of the Earth, in all its forms. As each science does, geoethics should also be able to present an image of the world, pointing out the manner in which it can be understood, investigated, designed, and experienced.
    Description: Published
    Description: 3-14
    Description: 3T. Pericolosità sismica e contributo alla definizione del rischio
    Description: 4V. Vulcani e ambiente
    Description: 4A. Clima e Oceani
    Description: 5A. Energia e georisorse
    Description: 6A. Monitoraggio ambientale, sicurezza e territorio
    Description: reserved
    Keywords: Etymological analysis ; Geoethics ; Geoscientists oath ; Responsibility ; Society ; 05. General::05.03. Educational, History of Science, Public Issues::05.03.99. General or miscellaneous ; 05. General::05.09. Miscellaneous::05.09.99. General or miscellaneous
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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    Istituto Nazionale di Geofisica e Vulcanologia
    Publication Date: 2017-04-04
    Description: This is the first volume of an international scientific journal that is dedicated to issues of geoethics and geological culture. Its goal is to inform the Italian and international scientific communities about what emerged at the GeoItalia 2011 conference, attended by not only Italian geoscientists. At this conference, the geoscientists questioned their role in society and the responsibilities that they have to assume as scholars of the planet Earth and experts of the territory. They highlighted the need for rediscovery of the cultural values of geology as a science that can contribute to the construction of correct social knowledge, and the need to be aware that geoethics cannot exist without a real awareness among geoscientists of the cultural value of the Earth sciences.
    Description: Published
    Description: 331
    Description: 5.9. Formazione e informazione
    Description: JCR Journal
    Description: open
    Keywords: Geoethics ; Geoetica ; Geological Culture ; Earth Sciences ; Philosophy ; Education ; 05. General::05.03. Educational, History of Science, Public Issues::05.03.99. General or miscellaneous ; 05. General::05.09. Miscellaneous::05.09.99. General or miscellaneous
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    Istituto Nazionale di Geofisica e Vulcanologia
    Publication Date: 2017-04-04
    Description: Prof. Giulio Giorello is amongst the most prominent philosophers of science in Italy and in the world. He is currently Professor of the Philosophy of Science at the University of Milan, Director of the Series ‘Science and Ideas’ (Raffaele Cortina Books Editor), and Literary Journalist of the cultural pages of the Corriere della Sera, one of the most important of the Italian newspapers. In this keynote presentation, in interview form, he talks about the value that the Earth sciences have had through history, framing this group of disciplines in ethical and epistemological terms, and highlighting some important elements that have to be considered in geological activities.
    Description: Published
    Description: 343-346
    Description: 5.9. Formazione e informazione
    Description: JCR Journal
    Description: open
    Keywords: Geoethics ; Geological Culture ; Geoetica ; Giulio Giorello ; Earth Sciences ; Interview ; Philosophy ; Epistemology ; 05. General::05.03. Educational, History of Science, Public Issues::05.03.99. General or miscellaneous ; 05. General::05.09. Miscellaneous::05.09.99. General or miscellaneous
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    Istituto Nazionale di Geofisica e Vulcanologia
    Publication Date: 2017-04-04
    Description: The international debate in the field of geoethics focuses on some of the most important environmental emergencies, while highlighting the great responsibilities of geoscientists, whatever field they work in, and the important social, cultural and economic repercussions that their choices can have on society. The GeoItalia 2009 and 2011 conferences that were held in Rimini and Turin, respectively, and were organized by the Italian Federation of Earth Science, were two important moments for the promotion of geoethics in Italy. They were devoted to the highlighting of how, and with what tools and contents, can the geosciences contribute to the cultural renewal of society. They also covered the active roles of geoscientists in the dissemination of scientific information, contributing in this way to the correct construction of social knowledge. Geology is culture, and as such it can help to dispel misconceptions and cultural stereotypes that concern natural phenomena, disasters, resources, and land management. Geological culture consists of methods, goals, values, history, ways of thinking about nature, and specific sensitivity for approaching problems and their solutions. So geology has to fix referenced values, as indispensable prerequisites for geoethics. Together, geological culture and geoethics can strengthen the bond that joins people to their territory, and can help to find solutions and answers to some important challenges in the coming years regarding natural risks, resources, and climate change. Starting from these considerations, we stress the importance of establishing an ethical criterion for Earth scientists, to focus attention on the issue of the responsibility of geoscientists, and the need to more clearly define their scientific identity and the value of their specificities.
    Description: Published
    Description: 335-341
    Description: 5.9. Formazione e informazione
    Description: JCR Journal
    Description: open
    Keywords: Geoethics ; Education ; History of science ; Public issues ; General (Philosophy of Earth sciences) ; 04. Solid Earth::04.04. Geology::04.04.99. General or miscellaneous ; 05. General::05.03. Educational, History of Science, Public Issues::05.03.99. General or miscellaneous ; 05. General::05.09. Miscellaneous::05.09.99. General or miscellaneous
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    Istituto Nazionale di Geofisica e Vulcanologia
    Publication Date: 2017-04-04
    Description: Franco Ferrarotti, Professor emeritus at ‘La Sapienza’ University of Rome; since winning the first Chair in this discipline in Italy in 1961, he has been considered the Father of Italian Sociology. An independent Member of Italian Parliament in the third government (1958-1963), a member of the New York Academy of Sciences, and a ‘visiting Professor’ at many universities in Europe, North America, Russia, Japan and Latin America. Franco Ferrarotti has taught and still teaches in Europe and America, and he has received many awards throughout his career. In this interview, he talks about the social aspects and consequences of Earth sciences studies.
    Description: Published
    Description: 347-348
    Description: 5.9. Formazione e informazione
    Description: JCR Journal
    Description: open
    Keywords: Geoethics ; Geological Culture ; Geoetica ; Social aspects ; Geologists activity ; Scientific information ; Society ; 05. General::05.03. Educational, History of Science, Public Issues::05.03.99. General or miscellaneous ; 05. General::05.09. Miscellaneous::05.09.99. General or miscellaneous
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    Istituto Nazionale di Geofisica e Vulcanologia
    Publication Date: 2017-04-04
    Description: We argue here that the introduction of an ethical code of conduct that follows the example of the Hippocratic Oath of physicians will help geologists to acquire binding awareness of their professional and social responsibilities. The ethical behavior and obligations of modern geologists involve, but are not limited to, the following issues: correct land/ environment use and management; respect of truth and science; and protection of the Earth systems, on both the local and global scales, and therefore, of our well-being. We believe that for geoligists, the explicit acceptance of an ethical code will help to promote: (i) an awareness of their social role, expertise and sense of belonging to a professional community; (ii) an understanding of the expectations of citizens and society; and (iii) cultural growth, with better use of research and implementation of scientific and professional skills. All this should enhance the public recognition of the social mission of geologists, which is essential for the well-being of society. Therefore, we suggest that like in the majority of medical schools, ethical training should be a part of the university curriculum for students in geology.
    Description: Published
    Description: 365-369
    Description: 5.9. Formazione e informazione
    Description: JCR Journal
    Description: open
    Keywords: Geoethics ; Geological Culture ; Geoetica ; Hippocratic Oath ; Geologists ; Social responsibility ; 05. General::05.03. Educational, History of Science, Public Issues::05.03.99. General or miscellaneous ; 05. General::05.09. Miscellaneous::05.09.99. General or miscellaneous
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  • 38
    Publication Date: 2017-04-04
    Description: The significant amounts of selenium(Se)emitted by volcanoesmay have important impact on human health due to the narrow range between nutrition requirement and toxic effects for living organisms upon Se exposure. Although soils play a key role in determining the level in food and water and thereby human health, little is known about the behaviour of Se in volcanic soils. In this work we evaluated the Se release during rainwater–soil interaction under controlled conditions using soils collected on the flanks of Etna volcano and synthetic rain. Seleniumconcentrations in soil leachate solutions displayed a spatial distribution, which cannot be explained by plume deposition, total Se soil concentrations or the presence of Fe oxides. Instead, Al compounds and to a minor extent SOM were identified as the active phases controlling the selenate mobilization during interaction with sulphate-containing rainwater. This shows the importance of soils as reactive interfaces. Selenium is mobilized when volcanic-derived acid rain interacts with poorly developed soils close to the crater. This geogenic process might influence the chemical composition of groundwater and as a result, human health.
    Description: Published
    Description: 235–244
    Description: 4.4. Scenari e mitigazione del rischio ambientale
    Description: JCR Journal
    Description: reserved
    Keywords: Selenium ; Volcanic soils ; Geogenic ; Volcanoes ; Contamination ; Groundwater ; 05. General::05.02. Data dissemination::05.02.01. Geochemical data ; 05. General::05.08. Risk::05.08.01. Environmental risk ; 05. General::05.09. Miscellaneous::05.09.99. General or miscellaneous
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  • 39
    Publication Date: 2017-04-04
    Description: Tephra fallout constitutes a serious threat to communities around active volcanoes. Reliable short-term 13 forecasts represent a valuable aid for scientists and civil authorities to mitigate the effects of fallout on the 14 surrounding areas during an episode of crisis. We present a platform-independent automatic procedure with Q1 15 the aim to daily forecast transport and deposition of volcanic particles. The procedure builds on a series of 16 programs and interfaces that automate the data flow and the execution and subsequent postprocess of fallout 17 models. Firstly, the procedure downloads regional meteorological forecasts for the area and time interval of 18 interest, filters and converts data from its native format, and runs the CALMET diagnostic model to obtain the 19 wind field and other micro-meteorological variables on a finer local-scale 3-D grid defined by the user. 20 Secondly, it assesses the distribution of mass along the eruptive column, commonly by means of the radial 21 averaged buoyant plume equations depending on the prognostic wind field and on the conditions at the vent 22 (granulometry, mass flow rate, etc). All these data serve as input for the fallout models. The initial version of 23 the procedure includes only two Eulerian models, HAZMAP and FALL3D, the latter available as serial and 24 parallel implementations. However, the procedure is designed to incorporate easily other models in a near 25 future with minor modifications on the model source code. The last step is to postprocess the outcomes of 26 models to obtain maps written in standard file formats. These maps contain plots of relevant quantities such 27 as predicted ground load, expected deposit thickness and, for the case of or 3-D models, concentration on air 28 or flight safety concentration thresholds
    Description: Published
    Description: 767-777
    Description: 3.6. Fisica del vulcanismo
    Description: 4.3. TTC - Scenari di pericolosità vulcanica
    Description: JCR Journal
    Description: reserved
    Keywords: Tephra fallout ; volcanoes ; 04. Solid Earth::04.08. Volcanology::04.08.08. Volcanic risk ; 05. General::05.09. Miscellaneous::05.09.99. General or miscellaneous
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  • 40
    Publication Date: 2017-04-04
    Description: Red Pompeian paintings, very famous for their deep intensity, are currently suffering from darkening. The origins of this darkening degradation are not clearly identified yet and remain a major issue for curators. In the specific case of cinnabar (HgS)-based red pigment, a photoinduced conversion into black metacinnabar is usually suspected. This work is focused on the blackening of red cinnabar paintings coated on a sparry calcite mortar. Different samples exhibiting different levels of degradation were selected upon visual observations and analyzed by synchrotron-based microanalytical techniques. Atomic and molecular compositions of the different debased regions revealed two possible degradation mechanisms. On one hand, micro X-ray fluorescence elemental maps show peculiar distributions of chlorine and sulfur. On the other hand, X-ray absorption spectroscopy performed at both Cl and S K-edges confirms the presence of characteristic degradation products: (i) Hg- Cl compounds (e.g., corderoite, calomel, and terlinguaite), which may result from the reaction with exogenous NaCl, in gray areas; (ii) gypsum, produced by the calcite sulfation, in black coatings. Metacinnabar is never detected. Finally, a cross section was analyzed to map the in-depth alteration gradient. Reduced and oxidized sulfur distributions reveal that the sulfated black coating consists of a 5-ím-thick layer covering intact cinnabar.
    Description: Published
    Description: 7484-7492
    Description: reserved
    Keywords: Microspectroscopy Analysis ; 05. General::05.09. Miscellaneous::05.09.99. General or miscellaneous
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 41
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    Journal of Photochemistry and Photobiology B: Biology 21 (1993), S. 81-86 
    ISSN: 1011-1344
    Keywords: Bacteria ; Genotoxicity ; Photosensitivity ; Singlet oxygen
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  • 42
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    Biochimica et Biophysica Acta (BBA)/Gene Structure and Expression 1087 (1990), S. 303-308 
    ISSN: 0167-4781
    Keywords: (Rat liver) ; Bacteria ; Chloramphenicol acetyltransferase ; Thin layer chromatography ; Transcription system ; Transfection
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    Topics: Biology , Chemistry and Pharmacology , Medicine , Physics
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  • 43
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    Free Radical Biology and Medicine 16 (1994), S. 571-580 
    ISSN: 0891-5849
    Keywords: Bacteria ; Catalase ; Cationization ; Free radicals ; Induction ; Oxidative stress ; Prevention ; Superoxide dismutase
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
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  • 44
    ISSN: 0003-2670
    Keywords: Adenosine triphosphate ; Bacteria ; Chemiluminescence ; Sterility
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Chemistry and Pharmacology
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  • 45
    ISSN: 0378-1119
    Keywords: Bacteria ; amino-acid homologies ; thermophile
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  • 46
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    Biosystems 28 (1992), S. 75-90 
    ISSN: 0303-2647
    Keywords: Algae ; Bacteria ; Endosymbiosis ; Land Plants ; Plastids
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
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  • 47
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    Postharvest Biology and Technology 3 (1993), S. 293-304 
    ISSN: 0925-5214
    Keywords: Antagonist ; Bacteria ; Green mould ; Packing-line
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
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  • 48
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    Free Radical Biology and Medicine 10 (1991), S. 297-303 
    ISSN: 0891-5849
    Keywords: 6-Hydroxydopamine ; Bacteria ; Dopamine ; Free radicals ; Oxidation ; Scavenger Enzymes
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  • 49
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    FEBS Letters 311 (1992), S. 246-250 
    ISSN: 0014-5793
    Keywords: Bacillus subtilis ; Bacteria ; Ion channel ; Lipid bilayer ; Plasma membrane
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    Topics: Biology , Chemistry and Pharmacology , Physics
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  • 50
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    FEBS Letters 294 (1991), S. 43-46 
    ISSN: 0014-5793
    Keywords: Bacteria ; Cytoplasmic membrane ; Fourier transform infrared spectroscopy (FT-IR) ; Gas chromatography ; In vivo spectroscopy ; Outer membrane
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Biology , Chemistry and Pharmacology , Physics
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  • 51
    ISSN: 0014-5793
    Keywords: Bacteria ; Chemokinesis ; Flagellar motor ; Membrane potential ; Motility ; Rhodobacter sphaeroides
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    Topics: Biology , Chemistry and Pharmacology , Physics
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  • 52
    ISSN: 0014-5793
    Keywords: Bacteria ; Fingerprint ; Glutathione transferase ; N-terminal sequence
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  • 53
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    FEBS Letters 144 (1982), S. 157-161 
    ISSN: 0014-5793
    Keywords: Bacteria ; Hypochlorous acid ; Microbicide ; Myeloperoxidase ; Oxidation ; Respiration
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  • 54
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    FEBS Letters 243 (1989), S. 61-64 
    ISSN: 0014-5793
    Keywords: Amino acid sequence ; Bacteria ; Nitrile hydratase
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  • 55
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    Journal of Experimental Marine Biology and Ecology 173 (1993), S. 273-289 
    ISSN: 0022-0981
    Keywords: Adaptation ; Antarctica ; Bacteria ; Physiology ; Phytoplankton ; Sea-ice formation
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Biology
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  • 56
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    Journal of Experimental Marine Biology and Ecology 171 (1993), S. 201-223 
    ISSN: 0022-0981
    Keywords: Bacteria ; Interstitial ; Mangrove ; Nutrient ; Production ; Sediment
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
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  • 57
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    Journal of Insect Physiology 39 (1993), S. 601-608 
    ISSN: 0022-1910
    Keywords: American cockroach ; Bacteria ; Cell division ; Flow cytometry DNA analysis ; Hemocyte ; Hemocytopoiesis ; Insect immunity ; Periplaneta americana
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Biology
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  • 58
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    Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis 309 (1994), S. 17-28 
    ISSN: 0027-5107
    Keywords: Bacteria ; High LET radiation ; Mutation induction
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Biology , Medicine
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  • 59
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    Phytochemistry 13 (1974), S. 905-910 
    ISSN: 0031-9422
    Keywords: Bacillus acidocaldarius ; Bacteria ; biosynthesis. ; fatty acids ; new fatty acid types ; ω-cyclohexyl fatty acids
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Biology , Chemistry and Pharmacology
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  • 60
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    Phytochemistry 12 (1973), S. 1117-1123 
    ISSN: 0031-9422
    Keywords: Bacillus acidocaldarius ; Bacteria ; acidophilic thermophilic bacteria ; menaquinone-9 ; mevalonate-[^1^4C] incorporation in hopene-b. ; polyprenols ; squalene and pentacyclic triterpene hydrocarbons
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
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  • 61
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    Phytochemistry 12 (1973), S. 1309-1313 
    ISSN: 0031-9422
    Keywords: Bacteria ; Mycobacterium marinum ; biosynthesis ; cyclization of lycopene ; inhibition by nicotine and CPTA. ; β-carotene
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
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  • 62
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    Phytochemistry 36 (1994), S. 849-852 
    ISSN: 0031-9422
    Keywords: 1,5-d-anhydrofructose. ; Bacteria ; ascopyrone T ; dihydroascopyrone T ; fungi ; haliclonol ; pyranones ; pyrones ; reductive bioconversion ; sponges ; truffles
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
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  • 63
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    FEBS Letters 251 (1989), S. 183-186 
    ISSN: 0014-5793
    Keywords: Amylase, α- ; Bacteria ; Glycosylation ; Secretion ; Yeast
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  • 64
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    Journal of Photochemistry and Photobiology B: Biology 5 (1990), S. 281-293 
    ISSN: 1011-1344
    Keywords: Bacteria ; Gram negative ; Gram positive ; hemin. ; porphyrin hematoporphyrin
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  • 65
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    Annual Review of Fish Diseases 3 (1993), S. 37-68 
    ISSN: 0959-8030
    Keywords: Bacteria ; Fish ; Gram-negative ; Pathogenesis ; Virulence
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Biology , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
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  • 66
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    Annual Review of Fish Diseases 4 (1994), S. 219-240 
    ISSN: 0959-8030
    Keywords: Bacteria ; Bivalve ; Immunity ; Shell disease
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Biology , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
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  • 67
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    Peptides 14 (1993), S. 629-632 
    ISSN: 0196-9781
    Keywords: Artifact ; Bacteria ; Contamination ; Cytokine ; Eicosenoid ; Endotoxin ; Fungi ; Hormone ; Lipopolysaccharide ; Microbial cell-wall product ; Mycoplasma ; Nitric oxide ; Peptidoglycan ; Physiology ; Pyrogen
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
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  • 68
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    Journal of Thermal Biology 3 (1978), S. 129-130 
    ISSN: 0306-4565
    Keywords: Aeromonas hydrophila ; Bacteria ; Bluegill ; Endotoxin ; Escherichia coli ; Fever ; Lepomis macrochirus ; Staphylococcus auereus ; Thermoregulation
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Biology
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  • 69
    ISSN: 0146-6380
    Keywords: Bacteria ; Recent sediments ; analysis of lipids ; bacterial markers ; cyanobacterial mat ; gypsum crust ; hydroxy fatty acids ; markers for environmental conditions ; methanogenic sediment ; mode of occurrence of lipids
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Chemistry and Pharmacology , Geosciences
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  • 70
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    Enzyme and Microbial Technology 7 (1985), S. 235-238 
    ISSN: 0141-0229
    Keywords: Bacteria ; Xanthomonas campestris ; xanthan ; zeta potential measurement
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Biology , Process Engineering, Biotechnology, Nutrition Technology
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  • 71
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    Biochimica et Biophysica Acta (BBA)/Protein Structure and Molecular 1077 (1991), S. 141-146 
    ISSN: 0167-4838
    Keywords: (S. marcescens) ; Bacteria ; Enzyme characterization ; Glutathione transferase
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  • 72
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    Mutation Research Letters 263 (1991), S. 231-236 
    ISSN: 0165-7992
    Keywords: Bacteria ; CHO cells ; Comutagenesis ; Mouse bone marrow ; N-Methyl-N'-nitro-N-nitroso-guanidine ; N-Methylnitrosourea ; Selenium ; Tobacco smoke
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
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  • 73
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    Journal of Analytical and Applied Pyrolysis 11 (1987), S. 329-340 
    ISSN: 0165-2370
    Keywords: Bacteria ; Salmonella. ; direct chemical ionization ; discriminant analysis ; mass spectrometry ; principal components analysis ; pyrolysis
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Chemistry and Pharmacology
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  • 74
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    Journal of Analytical and Applied Pyrolysis 24 (1992), S. 1-21 
    ISSN: 0165-2370
    Keywords: Bacteria ; biomarker compounds ; pyrolysis ; tandem mass spectrometry.
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  • 75
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    Journal of Analytical and Applied Pyrolysis 24 (1992), S. 23-38 
    ISSN: 0165-2370
    Keywords: Bacteria ; gas chromatography ; ion trap mass spectrometry ; pyrolysis. ; quartz tube pyrolysis
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  • 76
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    Journal of Analytical and Applied Pyrolysis 24 (1993), S. 199-210 
    ISSN: 0165-2370
    Keywords: Bacteria ; gas chromatography ; ion trap mass spectrometry ; pyrolysis.
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  • 77
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    Journal of Biochemical and Biophysical Methods 15 (1987), S. 215-227 
    ISSN: 0165-022X
    Keywords: Bacteria ; Calcium ; DNA ; Potassium ; Transition metal ; X-ray microanalysis
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  • 78
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    Mutation Research/Environmental Mutagenesis and Related Subjects 216 (1989), S. 251-257 
    ISSN: 0165-1161
    Keywords: Bacteria ; Radiations ; SOS Chromotest ; Short-term test
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
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  • 79
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    FEBS Letters 320 (1993), S. 28-30 
    ISSN: 0014-5793
    Keywords: Bacteria ; Behl ; Conformational change ; Crosslinker ; DSP ; Light-harvesting complex ; SDS ; Thermostability ; bacteriochlorophyll ; dithiobis(succinimidyl propionate) ; sodium dodecylsulfate
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
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