ALBERT

Description: In this study, a series of drained triaxial tests were performed in order to examine the effect of cementation on the shear behavior of granular soil. It was observed that the brittle nature and dilative tendency of granular soil is dominant under a low confining stress level, while high confining stress results in a contractive behavior despite the strong cementation bond. Based on experimental results, an idealized concept is suggested to define the shear strength of cemented sand in three distinctive zones: the cementation control zone with a constant cohesion intercept at a low confining stress level, the transition zone in which the cohesion intercept is gradually reduced after a breaking point, and the stress control zone with almost zero cohesion intercept due to breakage of cementation bonds at a high confining stress level. It was shown that the sitting pressures during cementation have little effect on the strength parameters of cemented sand, while the increase of gypsum content and relative density, and the decrease of particle size, result in an increase of the cohesion intercept and the breaking point. In addition, the prediction equations for the shear strength and cohesion intercept in the cementation control zone and the transition zone are suggested from the analytical and experimental interpretation.

Description: A new 30-arc second resolution global topography/bathymetry grid (SRTM30_PLUS) has been developed from a wide variety of data sources. Land and ice topography comes from the SRTM30 and ICESat topography, respectively. Ocean bathymetry is based on a new satellite-gravity model where the gravity-to-topography ratio is calibrated using 298 million edited soundings. The main contribution of this study is the compilation and editing of the raw soundings, which come from NOAA, individual scientists, SIO, NGA, JAMSTEC, IFREMER, GEBCO, and NAVOCEANO. The gridded bathymetry is available for ftp download in the same format as the 33 tiles of SRTM30 topography. There are 33 matching tiles of source identification number to convey the provenance of every grid cell. The raw sounding data, converted to a simple common format, are also available for ftp download.

Description: Cirripedes are one of the major groups of fouling organism in the marine environment. The cyprid can, before a permanent attachment, actively explore and walk on the substratum using its antennules in a bipedal fashion without leaving the surface. Studying the structure of the cyprid antennule is therefore important for understanding the events that culminate in biofouling by barnacles. There are at present no complete, standardised accounts of the structure of the cyprid antennules in thoracican barnacles, and moreover, the existing accounts vary in their use of terminology. This article describes the cyprid antennule of the barnacle Megabalanus rosa. This barnacle species is common in E Asia, and the cyprids have previously been used in several biofouling studies. All externally visible setae on the antennules have been mapped; these comprise both chemosensors with a terminal pore, a putative aesthetasc-like seta and mechano-sensory setae. More setae were found on the attachment disc than in previous scanning electron microscope-based studies, but not all structures that can be seen with transmission electron microscopy were visible. The disc itself seems to have a variable surface area, which could assist in exploring rough surfaces. The various lengths of the antennular setae, coupled with the disposition of the segments, enable the cyprid to cover a wide swath of substratum during exploratory walking. A new terminology is proposed for cyprid antennular setae, which will form a basis for future comparative and functional studies of cirripede settlement.

Description: Data from New Zealand and northern Victoria Land, Antarctica, indicate that the Cambrian Takaka Terrane intra-oceanic arc/backarc assemblage and the Bowers Terrane intra-oceanic arc/back-arc assemblage were accreted to the Gondwana margin by the Late Cambrian. Compelling similarities between the arc rocks and the immediate post-arc sediments firmly place the two regions in the same tectonic framework and imply close paleogeographic proximity. Currently, the Ross Orogen is thought to be the result of sinistral oblique convergence with west-directed subduction, and accretion of the arc assemblages is attributed to closure of backarc basins. Syntectonic fluvial conglomerates in both regions attest to the development of fluvial systems draining both the accreted arc and the contemporaneous continental margin arc. Trilobite faunas indicate that fluvial sedimentation commenced earlier in New Zealand than in northern Victoria Land. In the context of the widely accepted sinistral oblique convergence model, these data suggest an original position for New Zealand to the south of northern Victoria Land, probably in the region of the southern Ross Sea.

Description: The regional dust model system LM-MUSCAT-DES was developed in the framework of the SAMUM project. Using the unique comprehensive data set of near-source dust properties during the 2006SAMUMfield campaign, the performance of the model system is evaluated for two time periods in May and June 2006. Dust optical thicknesses, number size distributions and the position of the maximum dust extinction in the vertical profiles agree well with the observations. However, the spatio-temporal evolution of the dust plumes is not always reproduced due to inaccuracies in the dust source placement by the model. While simulated winds and dust distributions are well matched for dust events caused by dry synoptic-scale dynamics, they are often misrepresented when dust emissions are caused by moist convection or influenced by small-scale topography that is not resolved by the model. In contrast to long-range dust transport, in the vicinity of source regions the model performance strongly depends on the correct prediction of the exact location of sources. Insufficiently resolved vertical grid spacing causes the absence of inversions in the model vertical profiles and likely explains the absence of the observed sharply defined dust layers.

Description: Screening for pathogenic micro-organisms is an essential component of translocation-based conservation management. While there are some data on pathogens in New Zealand passerines, little is known about the distribution and prevalence of pathogens infecting New Zealand Psittaciformes. We conducted a survey for pathogens of the vulnerable New Zealand endemic red-crowned parakeet Cyanoramphus novaezelandiae in two wild populations (Little Barrier Island and Raoul Island), and in a translocated population (Tiritiri Matangi Island). A total of 101 cloacal samples were tested for Salmonella and Yersinia. Of these, 82 samples were also tested for Campylobacter. None of these microorganisms were detected. Although our sampling effort was insufficient to detect a low prevalence of Campylobacter, modelling of minimum detectable prevalence of Salmonella and Yersinia indicates that these micro-organisms would have been detected if present as common or chronic conditions of red-crowned parakeets at these sites.

Description: Cephalopods play a significant role in coastal and oceanic ecosystems, both as consumers of invertebrates and small fish and as the prey of some fish, seabirds and marine mammals and other large predators. Approximately 30 species of cephalopod have been recorded in the north-eastern Atlantic and adjacent waters, including 18 teuthid (squid), seven sepiolid (bobtail), three sepiid (cuttlefish) and 10 octopod (octopus) species. A number of these are exploited commercially and support important target and by-catch fisheries in Western Europe. During the past decade, annual landings of cephalopods from the north-eastern Atlantic (International Council for the Exploration of the Sea [ICES] area) have ranged from 40,000 to 55,000 t, including substantial catches of long-fin (loliginid) squid (7000–11,000 t per annum), short-fin (ommastrephid) squid (3000–10,000 t), cuttlefish (including sepiolids; 16,000–24,000 t) and octopods (12,000–18,000 t). The most important exploited species in the north-eastern Atlantic are Eledone cirrhosa, Illex coindetii, Loligo forbesi, Loligo vulgaris, Octopus vulgaris, Todarodes sagittatus, Todaropsis eblanae and Sepia officinalis. Other species including Alloteuthis subulata, Gonatus fabricii and certain sepiolids, appear to be abundant and may be marketable. Cephalopods tend to rapidly concentrate heavy metals and other toxic substances in their tissues and this plays an important role in the bioaccumulation of these pollutants in marine predators as well as having implications for human consumption. High levels of cadmium and mercury are often recorded in cephalopod tissues. Another important environmental issue concerns the potential impact of widespread human activity on cephalopod spawning areas, particularly bottom-fishing operations but also shipping, and oil exploration and production. In contrast to many finfish species that spawn annually over a number of years, most cephalopods live only 1–2 yr and die after spawning. Therefore, failure to reproduce and recruit adequately in any given year may seriously impact the long-term viability of cephalopod stocks. Climate change is expected to have a significant effect on many species in the north-eastern Atlantic. This review provides a detailed account of the zoogeography, biology and ecology of cephalopods in the north-eastern Atlantic, on a species-by-species basis. Important economic, ecological and conservation issues affecting cephalopods in this area are also discussed

Description: The SAMUM field campaign in southern Morocco in May/June 2006 provides valuable data to study the emission, and the horizontal and vertical transports of mineral dust in the Northern Sahara. Radiosonde and lidar observations show differential advection of air masses with different characteristics during stable nighttime conditions and up to 5-km deep vertical mixing in the strongly convective boundary layer during the day. Lagrangian and synoptic analyses of selected dust periods point to a topographic channel from western Tunisia to central Algeria as a dust source region. Significant emission events are related to cold surges from the Mediterranean in association with eastward passing upper-level waves and lee cyclogeneses south of the Atlas Mountains. Other relevant events are local emissions under a distinct cut-off low over northwestern Africa and gust fronts associated with dry thunderstorms over the Malian and Algerian Sahara. The latter are badly represented in analyses from the European Centre for Medium–Range Weather Forecasts and in a regional dust model, most likely due to problems with moist convective dynamics and a lack of observations in this region. This aspect needs further study. The meteorological source identification is consistent with estimates of optical and mineralogical properties of dust samples.

Description: Two Gram-positive, aerobic actinomycete strains, designated YIM 48771(T) and YIM 48782(T), were isolated from virgin forest soil samples collected in Hunan Province, China. 16S rRNA gene sequence similarities of the two novel isolates ranged from 96.3 to 97.6% with species of the genus Sphaerisporangium with validly published names but, in the tree based on 16S rRNA gene sequences, the isolates formed distinct phyletic lines. The level of 16S rRNA gene sequence similarity between the two novel isolates was 97.1%. DNA-DNA hybridization of strains YIM 48771(T) and YIM 48782(T) with recognized species of the genus Sphaerisporangium revealed that the level of DNA-DNA relatedness was below 70%. The DNA G+C contents of strains YIM 48771(T) and YIM 48782(T) were 67.1 and 71 mol%, respectively. Chemotaxonomic data [major menaquinone, MK-9(H(4)); major polar lipids, diphosphatidylglycerol, phosphatidylinositol mannoside, phosphatidylethanolamine and phosphoglycolipids; major fatty acids, iso-C(16:0) and 10-methyl C(17:0)] supported the affiliation of the two isolates with the genus Sphaerisporangium. The results of DNA-DNA hybridization and physiological and biochemical tests allowed genotypic and phenotypic differentiation of the two isolates from recognized Sphaerisporangium species. Based on morphological, chemotaxonomical and phylogenetic data, strains YIM 48771(T) and YIM 48782(T) are considered to represent two novel species of the genus Sphaerisporangium, for which the names Sphaerisporangium flaviroseum sp. nov. (type strain, YIM 48771(T)=DSM 45170(T)=KCTC 19393(T)) and Sphaerisporangium album sp. nov. (type strain, YIM 48782(T)=DSM 45172(T)=CCTCC AA 208026(T)) are proposed.

Description: A Gram-positive, milk-white coloured, aerobic strain, YIM 48868(T), was isolated from the rhizosphere soil of Maytenus hookeri Loes in Xishuangbanna, China. 16S rRNA gene sequence similarity studies showed that strain YIM 48868(T) was a member of the genus Actinopolymorpha, showing 96.8% sequence similarity to Actinopolymorpha singaporensis IM 7744(T) and 97.0% similarity to Actinopolymorpha rutila YIM 45725(T). Chemotaxonomic data (peptidoglycan type 1, LL-diaminopimelic acid; sugar pattern C, glucose, rhamnose and ribose; polar lipids PI, diphosphatidylglycerol, phosphaticlylglycerol, phosphatidylinositol mannosides and phosphatidylinositol) were characteristic of the genus Actinopolymorpha. A phylogenetic tree based on 16S rRNA gene sequences showed that strain YIM 48868(T) formed a distinct phylogenetic lineage within the genus Actinopolymorpha. Strain YIM 48868(T) could be differentiated from recognized species by means of phenotypic properties and the predominant menaquinones [MK-9(H(6)), MK-9(H(8)), MK-10(H(6)), MK-10(H(8))]. The DNA G+C content was 66.6 mol%. The DNA-DNA relatedness values between strain YIM 48868(T) and the type strains of A. singaporensis and A. rutila were 48.7% and 53.1%, respectively. These data, in combination with phenotypic and chemotaxonomic data, demonstrate that strain YIM 48868(T) represents a novel species in the genus Actinopolymorpha, for which the name Actinopolymorpha alba sp. nov. is proposed. The type strain is YIM 48868(T) (=CCTCC AA 208030(T) =DSM 45243(T)).

Description: Barnacle cypris larvae respond to many cues when selecting a settlement site. The settlement of over a million larvae on tiles of different textures, orientations and densities of incumbent settlers was measured on the rocky intertidal at Great Cumbrae, Scotland. Half of the tiles were replaced every tide whereas the others simultaneously accumulated settlers. Factor effects varied on each tide, and converged in the accumulating deployment. Increasing incumbent density led to net loss of settlement, which was less probable on the textures on which fastest settlment occurred ('very fine'), and more probable on those on which settlement was slowest ('smooth'). More settlement occurred on down-facing orientations during daylight and vice versa. Cue ranks were non-linear, so a path analysis model quantified the relative influence of each factor. Gregariousness was the most influential cue measured, although unmeasured factors had greater effects, highlighting the complexity of settlement influences in this species.

Description: Fluorescence excitation-emission matrices showed the spectral signature of dissolved organic matter (DOM) downstream in the River Tet at all seasons corresponding to humic substances with maximum fluorescence emission em=420-460nm for excitations of ex=340-360nm and the occasional presence of tryptophan, tracer of anthropogenic pressure, spectroscopically identified by ex/em=310/350nm. A factorial discriminant analysis, performed using the parameters selected (ex/em pairs of wavelength), succeeded in a better discrimination of seasons than stations, and clearly showed the presence of two fluorophores. Fluorophore 1, with two absorption bands: ex=260-320nm and 330-390nm for em=440-500nm, and Fluorophore 2, with one absorption band: ex=300-360nm for em=410nm, which are attributed to humic acid (HA) and fulvic acid (FA), respectively. Variations of DOM relative contents downstream in the River Tet, according to seasons and stations, showed high amounts of DOM (pedogenic character) along the river in the humid period, with the highest value obtained in the mountain section. In contrast, in summer, the DOM contents were low (aquagenic character). Moreover, DOM presents a relatively constant composition with a percentage of FA ranging from 40% at the mountain station to 48% at the mouth river, whatever the season.

Description: A spherical-shaped, phototrophic, purple sulfur bacterium was isolated in pure culture from anoxic sediment in a marine aquaculture pond near Bheemli (India). Strain JA142T is Gram-negative and non-motile. It has a requirement for NaCl (optimum of 2 % and maximum of 6 % w/v NaCl). Intracellular photosynthetic membranes are of the vesicular type. In vivo absorption spectra indicate the presence of bacteriochlorophyll a and carotenoids of the okenone series as photosynthetic pigments. Phylogenetic analysis on the basis of 16S rRNA gene sequences showed that strain JA142T is related to halophilic purple sulfur bacteria of the genera Thiohalocapsa and Halochromatium, with the highest sequence similarity to Thiohalocapsa halophila DSM 6210T (97.5 %). Morphological and physiological characteristics differentiate strain JA142T from other species of the genera Halochromatium and Thiohalocapsa. Strain JA142T is sufficiently different from Thiohalocapsa halophila based on 16S rRNA gene sequence analysis and morphological and physiological characteristics to allow the proposal of a novel species, Thiohalocapsa marina sp. nov., with the type strain JA142T (=JCM 14780T =DSM 19078T). The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain JA142T is AM491592. A phase-contrast micrograph of cells of strain JA142T, whole-cell and acetone absorption spectra and 16S rRNA gene sequence-based neighbour-joining, maximum-likelihood, minimum-evolution and maximum-parsimony trees are available as supplementary material with the online version of this paper.

Description: Since early 2008, an increasing number of countries have ratified an international treaty to ban the application of antifouling (AF) coatings based on organotin compounds (eg tributyltin (TBT) and triphenyltin). As a result, the demand for environmentally friendly, non-toxic or low-toxicity AF compounds and technologies (green AF agents) has become an urgent reality. Marine coatings based on Cu2O and various other biocides have a negative impact on the environment and they must eventually be replaced by new, effective, and environmentally friendly AF compounds. This mini-review describes important AF compounds discovered from a variety of organisms from 2004 until mid 2009, and discusses recent and general trends in the discovery of AF compounds. Finally, a perspective on the future of AF compound development is presented. The discussion is aimed at updating scientists and engineers on the current challenges facing AF research.

Description: The presented study assessed the heavy metal contamination risk in a former sludge deposit field of the River Ruhr in Essen, Germany. Therefore, the temporal and spatial distribution in soils and plants, chemical fractionation, mobilization potential, and transfer characteristics have been investigated. Soil samples, roots and shoots of rushes (Juncus sp.), and stem wood disks of willows (Salix sp.) were analyzed for Zn, Cu, Pb, Ni, Cr, and Cd. Plant available and mobile heavy metal portions have been determined using a sequential extraction procedure. The results show that the soils and the rushes are highly contaminated, although there is a considerable decrease compared to initial concentrations some 20 years ago. The willows show only small heavy metal enrichment. pH induced mobilization potential in soil is high for Cd, Zn and Ni. Additionally, these elements contain high portions of plant-available fractions. High transfer rates from soil to roots and very high rates from roots to shoots of rushes have been determined for Cd and Zn, indicating an accumulation of these elements in shoots of rushes. The rushes reflect the temporal and spatial heavy metal distribution in soil and might thus be used as a bioindicator or for phytoremediation.

Description: A novel alphaproteobacterium, strain LD81(T), was isolated from the marine macroalga. Laminaria saccharina. The bacterium is mesophilic and shows a typical marine growth response. It is a chemoheterotrophic aerobe with the potential for denitrification. Growth optima are 25 degrees C, pH 5.5 and 3% NaCl. Strain LD81(T) has a unique phylogenetic position, not fitting any of the known families of the Alphaproteobacteria. The 16S rRNA gene sequence revealed a distant relationship to species of several orders of the Alphaproteobacteria, with less than 90% sequence similarity. Phylogenetically, strain LD81(T) is related to the type strains of Terasakiella pusilla (88.4% 16S rRNA gene sequence similarity) and the three Thalassospira species (88.9-89.2%. It forms a cluster with these bacteria and a novel as-yet undescribed isolate (KOPRI 13522; 96.6% sequence similarity). Strain LD81(T) has a relatively low DNA G + C content (51.1 mol%) and, due to its distant phylogenetic position from all other alphaprotecibacteria, strain LD81(T) (=NCIMB 14374(T) =JCM 14845(T)) is considered as the type strain of a novel species within a new genus, for which the name Kiloniella laminariae gen. nov., sp. nov. is proposed. The genus Kiloniella represents the type of the new family Kiloniellaceae fam. nov. and order Kiloniellales ord. nov.

Description: Draft regulations for prospecting and exploration of polymetallic sulphides in the “Area” are currently being considered for implementation by the International Seabed Authority. This paper examines possible models for allocation of lease blocks for exploration and the proposed schedule for relinquishing blocks during the exploration phase. One model for granting of exploration licenses under the proposed regulations involves contiguous lease blocks, similar to that being considered for nodules and crusts; another model involves non-contiguous blocks. An analysis of the occurrence and distribution of known polymetallic sulphides in 32 training areas shows that the regulations for prospecting and exploration of crusts likely cannot be applied equally to polymetallic sulphides.

Description: A wide variety of terrestrial biomass feed stocks have been identified as suitable candidates for fractionation and conversion into biofuels. In particular, microalgae have been promoted as a future source of transportation fuels primarily because of their stated potential to produce up to 10 times more oil per acre than traditional biofuel crops. Their ability to grow relatively fast, be harvested on a daily basis, and grown in earthen ponds or closed photobioreactors that occupy marginal or poor crop lands using salt or brackish water, are often referenced. When these attractive traits are coupled with the potential to concomitantly harvest valuable co‐products such as biopolymers, proteins, and animal feeds, one can see why microalgae are often touted as biotechnology's “green gold”. The development of large‐scale microalgae farms, however, has been slowed by limitations in downstream processing technology. For example, traditional methods to dewater, extract, and recover bio‐oil from oil‐seeds possess little utility for microalgae. The extreme requirement of dewatering poses tremendous hurdles for any technology processing biofuels from microalgae. To further complicate matters, identifying the most appropriate paths for appropriate extraction technology depends heavily on the microalgal species and its cultivation status, both of which are highly characterized for higher plants as compared to microalgae. In this review we discuss existing extraction methodologies as they have and can be applied to microalgae. Commentary is provided on their potential as a unit operation that exists within the framework of an industrial‐scale microalgal cultivation process that extends from the production of biomass in photobioreactors to the fractionation of the recovered bio‐oil.

Description: Cephalopods are increasingly acknowledged as an ecologically important group in Chilean ecosystems, but are also one of their less-known biogeographic components. Notably, this group is represented virtually exclusively by non-endemic species, although we hypothesized that their distribution over the coast should be constrained by similar physical determinants to those affecting endemic taxa. We thus present a first evaluation of the latitudinal patterns of diversity and distribution of cephalopod species in Chile, based on geographical data obtained from a review of the available literature. We constructed presence–absence binary matrices of coastal and oceanic species in 20 latitudinal units (2°), for then calculating the respective similarity matrices to obtain a distribution dendrogram using hierarchical cluster analysis (UPGM). The original binary matrices were resampled performing 1000 stochastic reassignments to calculating the 95th percentile as the criterion to identify significant clusters. Statistical comparisons between distributional groupings were performed using ANOSIM. We recorded 86 cephalopods in Chile, including oceanic (71) and coastal (15) species. Species richness showed two major breaks at 30° S and 42° S, and decreased toward higher latitudes. Cephalopod species showed well-defined endpoints of distribution within the Chilean coast, differentiating three main biogeographical units: northern (18–30° S), central (30–42° S) and southern (42–56° S) areas. Biogeographical patterns of cephalopod species in Chile showed no particular difference with those already described for most Chilean taxa. The marked distribution breaks of cephalopods at 30° and 42° S suggest that external forcing and physical factors other than temperature gradients may strongly constrain their dispersal.

Description: During studies of moderately halophilic strains of Ectothiorhodospira from steppe soda lakes, we found a novel group of bacteria related to Ectothiorhodospira haloalkaliphila with salt optima at 50–80 g NaCl l”1. Phylogenetic analysis using 16S rRNA gene sequences of strains from soda lakes in Mongolia, Egypt and Siberia revealed separation of the group of new isolates from other Ectothiorhodospira species, including the closely related Ect. haloalkaliphila. DNA–DNA hybridization studies demonstrated that the new isolates form a homogeneous group at the species level, but at the same time are distinct from related species such as Ect. haloalkaliphila, Ect. vacuolata, Ect. shaposhnikovii and Ect. marina. The new isolates are considered to be strains of a novel species, for which the name Ectothiorhodospira variabilis sp. nov. is proposed, with the type strain WN22T (5VKM B-2479T 5DSM 21381T). Photosynthetic pigments of the novel species are bacteriochlorophyll a and carotenoids of the spirilloxanthin series with spirilloxanthin and derivatives thereof, together with small amounts of lycopene and rhodopin. Gas vesicles are formed by most of the strains, particularly in media containing yeast extract (0.5 g l”1) and acetate (0.5–2.0 g l”1). Sequence analysis of nifH (nitrogenase) and cbbL (RuBisCO) confirmed the assignment of the strains to the genus Ectothiorhodospira and in particular the close relationship to Ect. haloalkaliphila. The novel species Ect. variabilis is found in soda lakes separated by great geographical distances and is an alkaliphilic and halophilic bacterium that tolerates salt concentrations up to 150–200 g NaCl l”1.

Description: A Gram-positive, non-spore-forming actinomycete, designated strain CC 0387(T), was isolated from a sediment sample from the Baltic Sea, Germany. Classification using a polyphasic approach and comparative 16S rRNA gene sequencing showed that strain CC 0387(T) belonged to the genus Promicromonospora and displayed more than 3% 16S rRNA gene sequence divergence from all Promicromonospora species with validly published names. Strain CC 0387(T) did not produce aerial mycelium. Substrate mycelia were yellowish white to pale orange-yellow and fragmented into bacillary or coccoid elements. The cell wall contained lysine and alanine. Whole-cell hydrolysates contained galactose, glucose, rhamnose and ribose. The polar lipid profile consisted of diphosphatidylglycerol, phosphatidylglycerol, an unknown phospholipid and an unknown glycolipid. The predominant menaquinone was MK-9(H-4) (86%). The G+C content of the DNA was 71.87 mol%. Based on morphological, chemotaxonomic, phenotypic and genetic characteristics, strain CC 0387(T) (=CCTCC AA208024(T)=DSM 21481(T)) represents a novel species, for which the name Promicromonospora flava sp. nov. is proposed.

Description: Symptoms characteristic of wasting disease, thought to result from infection by protozoan pathogens (i.e. Labyrinthula spp.), are a common phenomenon affecting seagrass species worldwide. However relatively little is known about factors that control the survival and success of Labyrinthula in part due to the difficulty associated with quantifying the growth of this organism. Here we describe a simple and inexpensive method for measuring growth of Labyrinthula in liquid culture that takes into consideration both cell density and areal spread. The technique allows for examination of the effects of both abiotic and biotic factors on the growth of Labyrinthula apart from its seagrass host, separating the effects of environmental condition on the host from their effects on the pathogen.

Description: The bacterial strain Gp_4_7.1T, isolated from the marine sponge Isops phlegraei collected at the Sula Ridge off the Norwegian coast, was characterized. The isolate was a motile spirillum that was monopolarly and monotrichously flagellated. It was aerobic, Gram-negative, oxidase-positive and catalase-negative. Optimal growth occurred between 20 and 30 °C, at pH 7–8 and with a salt concentration of 2–3 % (w/v). The isolate showed a relatively restricted nutritional profile. Substrate utilization tests were only positive for arabinose. Enzyme tests were positive for esterase lipase C8, lipase C14, leucine arylamidase and naphthol-AS-BI-phosphohydrolase. The strain was not able to reduce nitrate. The major cellular fatty acids were C16 : 1 ω7 and C16 : 0. The DNA G+C content was 62.6 mol%. Phylogenetic analysis based on 16S rRNA gene sequence comparison classified the strain as a member of the order Oceanospirillales in the class Gammaproteobacteria. Strain Gp_4_7.1T formed a distinct phyletic line with less than 94 % 16S rRNA gene sequence similarity to its closest relatives with validly published names. Based on the determined data, it is proposed that the strain represents a novel species in a new genus, Spongiispira norvegica gen. nov., sp. nov.; the type strain of Spongiispira norvegica is Gp_4_7.1T (=DSM 17749T =NCIMB 14401T).

Description: Strain HAL40bT was isolated from the marine sponge Haliclona sp. 1 collected at the Sula Ridge off the Norwegian coast and characterized by physiological, biochemical and phylogenetic analyses. The isolate was a small rod with a polar flagellum. It was aerobic, Gram-negative and oxidase- and catalase-positive. Optimal growth was observed at 20–30 °C, pH 7–9 and in 3 % NaCl. Substrate utilization tests were positive for arabinose, Tween 40 and Tween 80. Enzyme tests were positive for alkaline phosphatase, esterase lipase (C8), leucine arylamidase, acid phosphatase, naphthol-AS-BI-phosphohydrolase and N-acetyl-β-glucosaminidase. The predominant cellular fatty acid was C17 : 1 ω8, followed by C17 : 0 and C18 : 1 ω7. Analysis by matrix-assisted laser desorption/ionization time-of-flight MS was used to characterize the strain, producing a characteristic low-molecular-mass protein pattern that could be used as a fingerprint for identification of members of this species. The DNA G+C content was 69.1 mol%. Phylogenetic analysis supported by 16S rRNA gene sequence comparison classified the strain as a member of the class Gammaproteobacteria. Strain HAL40bT was only distantly related to other marine bacteria including Neptunomonas naphthovorans and Marinobacter daepoensis (type strain sequence similarity 〉90 %). Based on its phenotypic, physiological and phylogenetic characteristics, it is proposed that the strain should be placed into a new genus as a representative of a novel species, Spongiibacter marinus gen. nov., sp. nov.; the type strain of Spongiibacter marinus is HAL40bT (=DSM 17750T =CCUG 54896T).

Description: Sediments of upwelling regions off Namibia, Peru, and Chile contain dense populations of large nitrate-storing sulfide-oxidizing bacteria, Thiomargarita, Beggiatoa, and Thioploca. Increased contents of monounsaturated C16 and C18 fatty acids have been found at all stations studied, especially when a high density of sulfide oxidizers in the sediments was observed. The distribution of lipid biomarkers attributed to sulfate reducers (10MeC16:0 fatty acid, ai-C15:0 fatty acid, and mono-O-alkyl glycerol ethers) compared to the distribution of sulfide oxidizers indicate a close association between these bacteria. As a consequence, the distributions of sulfate reducers in sediments of Namibia, Peru, and Chile are closely related to differences in the motility of the various sulfide oxidizers at the three study sites. Depth profiles of mono-O-alkyl glycerol ethers have been found to correlate best with the occurrence of large sulfide-oxidizing bacteria. This suggests a particularly close link between mono-O-alkyl glycerol ether-synthesizing sulfate reducers and sulfide oxidizers. The interaction between sulfide-oxidizing bacteria and sulfate-reducing bacteria reveals intense sulfur cycling and degradation of organic matter in different sediment depths.

Description: A coccoid, phototrophic purple sulfur bacterium was isolated in pure culture from a mud sample collected from brackish water in the Bhitarkanika mangrove forest of Orissa, India, in a medium containing 2 % NaCl (w/v). This bacterium, strain JA304T, was Gram-negative and had a requirement for NaCl. Intracellular photosynthetic membranes were of the vesicular type. The colour of the phototrophically grown culture was saddle-brown. Bacteriochlorophyll a and the carotenoid lycopene were present as photosynthetic pigments. Strain JA304T was able to grow photolithoautotrophically and could photoassimilate a number of organic substrates. Yeast extract was required for growth of strain JA304T. The DNA G+C content was 68.1–68.9 mol%. 16S rRNA gene sequence comparisons indicate that the isolate represents a member of the Chromatiaceae within the class Gammaproteobacteria. According to sequence comparison data, strain JA304T is positioned distinctly outside the group formed by the four genera Thiocystis, Chromatium, Allochromatium and Thermochromatium, with only 86.7–91.0 % sequence similarity. Distinct morphological, physiological and genotypic differences from these previously described taxa support the classification of this isolate as a representative of a novel species in a new genus, for which the name Thiophaeococcus mangrovi gen. nov., sp. nov. is proposed. The type strain of Thiophaeococcus mangrovi is JA304T (=JCM 14889T =DSM 19863T). PABA, para-aminobenzoic acid The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain JA304T is AM748925. A phase-contrast micrograph and whole-cell absorption spectrum and an acetone spectrum of extracted pigments of strain JA304T are available as supplementary material with the online version of this paper.

Description: A novel Gram-negative, motile, aerobic rod-shaped bacterium was isolated from a Bathymodiolus sp. specimen collected from the Logatchev hydrothermal vent field at the Mid-Atlantic Ridge. The novel strain, M41(T), was catalase- and oxidase-positive and metabolised various carbohydrates and amino acids. It grew well in marine broth with an optimal growth temperature of 31 degrees C to 34 degrees C (range 4-40 degrees C and salinity requirement of 3% (range 0.3-9%). The pH range for growth was pH 4.6 to 9.5, with an optimum at pH 8.0. The predominant fatty acids were C-16: (1)omega 7c, C-16: 0 and C-18: 1 omega 7c. The DNA G + C content of strain M41(T) was 52.2 mol%. The 16S rRNA gene sequence was 94 % similar to that of the type strain of Oceanospirillum beijerinckii, the closest cultivated relative. Other related type strains were Oceanospirillum multiglobuliferum (93% gene sequence similarity), Neptunomonas naphthovorans (92%) and Marinobacterium jannaschii (92 %). According to phylogenetic analysis and physiological characteristics, it is suggested that strain M41(T) represents a new genus and novel species for which the name Amphritea atlantica gen. nov., sp. nov. is proposed. The type strain is M41(T) (= DSM 18887(T) = LMG 24143(T)).

Description: Greywacke, argillite, greyschist and hypabyssal igneous rocks have been obtained from an Ocean Drilling Program core on the Queensland Plateau and from xenoliths in a volcanic breccia dredged from the crest of the Lord Howe Rise. Low to intermediate detrital quartz contents, 260 – 240 Ma K – Ar ages, and only moderately radiogenic Sr and Nd isotope compositions, suggest a correlation with the New England Orogen of eastern Australia, rather than with Australia's Lachlan Orogen or other adjacent geological provinces. Our results indicate that the New England Orogen terranes continue towards New Zealand at least as far as the southern Lord Howe Rise. The projected offshore boundaries of the major east Australian orogens are now known with more confidence, and do not appear to require any major cross-orogen offsets.

Description: The properties of the body surface play a crucial role in most interactions of marine organisms. Critical ecological properties such as drag, morphology, uptake and release of radiation and organic matter are linked to the body surface of an aquatic organism. The properties and functions of this interface may be modified substantially by the presence and activities of epibiotic communities. This, in turn, may lead to substantial modulation of the interactions between the organism bearing epiphytes and its environment, with consequences for the relative fitness of the host organism (basibiont) and its interactors, and ultimately, the structure and functioning of the assemblage. Epibiosis may act as an ecological lever via these indirect effects, greatly amplifying or buffering biotic and abiotic stress.

Description: A novel actinonmycete strain, YIM 0006(T), was isolated from soil of a tropical rainforest in northern Thailand. The isolate displayed the following characteristics: aerial mycelium is absent, short spore chains are formed directly on the substrate mycelium, contains meso-diaminopimelic acid, arabinose and galactose (cell-wall chemotype IV), the diagnostic phospholipid is phosphaticlylcholine, MK-9(H-4) is the predominant menaquinone and the G + C content of the genomic DNA is 69.0 mol%. Phylogenetic analysis and phenotypic characteristics showed that strain YIM 0006(T) belongs to the family Pseudonocardiaceae but can be distinguished from representatives of all genera classified in the family. The novel genus and species Actinomycetospora chiangmaiensis gen. nov., sp. nov. are proposed, with strain YIM 0006(T) (=CCTCC AA 205017(T) =DSM 45062(T)) as the type strain of Actinomycetospora chiangmaiensis.

Description: The importance of crustal fluid chemical composition in driving the marine deep subseafloor biosphere was examined in northeast Pacific ridge-flank sediments. At IODP Site U1301, sulfate from crustal fluids diffuses into overlying sediments, forming a transition zone where sulfate meets in situ-produced methane. Enhanced cell counts and metabolic activity suggest that sulfate stimulates microbial respiration, specifically anaerobic methane oxidation coupled to sulfate reduction. Cell counts and activity are also elevated in basement-near layers. Owing to the worldwide expansion of the crustal aquifer, we postulate that crustal fluids may fuel the marine deep subseafloor biosphere on a global scale.

Description: A rod-shaped, translucent yellow-pigmented, Gram-negative bacterium, strain B390(T), was isolated from the bryozoan Schizobrachiella sanguinea collected in the Adriatic Sea, near Rovinj, Croatia. 16S rRNA gene sequence analysis indicated affiliation to the genus Tenacibaculum, with sequence similarity levels of 94.8-97.3 % to type strains of species with validly published names. It grew at 5-34 degrees C, with optimal growth at 18-26 degrees C, and only in the presence of NaCl or sea salts. In contrast to other type strains of the genus, strain B390(T) was able to hydrolyse aesculin. The predominant menaquinone was MK-6 and major fatty acids were iso-C-15:0, iso-C-15:0 3-OH and iSO-C-15:1. The DNA G + C content was 31.6 mol%. DNA-DNA hybridization and comparative physiological tests were performed with type strains Tenacibaculum aestuarii JCM 13491(T) and Tenacibaculum lutimaris DSM 16505 T, since they exhibit 16S rRNA gene sequence similarities above 97%. These data, as well as phylogenetic analyses, suggest that strain B390(T) (=DSM 18961(T) =JCM 14633(T)) should be classified as the type strain of a novel species within the genus Tenacibaculum, for which the name Tenacibaculum adriaticum sp. nov. is proposed.

Description: Octopuses of the family Octopodidae adopt two major life-history strategies. The first is the production of relatively few, large eggs resulting in well-developed hatchlings that resemble the adults and rapidly adopt the benthic habit of their parents. The second strategy is production of numerous small eggs that hatch into planktonic, free-swimming hatchlings with few suckers, simple chromatophores and transparent musculature. These distinctive planktonic stages are termed paralarvae and differ from conspecific adults in their morphology, physiology, ecology and behaviour. This study aims to review available knowledge on this subject. In benthic octopuses with planktonic stages, spawning characteristics and duration of planktonic life seem to play an important role in their dispersal capacities. Duration of the hatching period of a single egg mass can range from 2 days to 11 wk, while duration of the planktonic stage can range from 3 wk to half a year, depending on the species and temperature. Thus these paralarvae possess considerable potential for dispersal. In some species, individuals reach relatively large sizes while living as part of the micronekton of oceanic, epipelagic waters. Such forms appear to delay settlement for an unknown period that is suspected to be longer than for paralarvae in more coastal, neritic waters. During the planktonic period, paralarval octopuses feed on crustaceans as their primary prey. In addition to the protein, critical to the protein-based metabolism of octopuses (and all cephalopods), the lipid and copper contents of the prey also appear important in maintaining normal growth. Littoral and oceanic fishes are their main predators and defence behaviours may involve fast swimming speeds, use of ink decoys, dive responses and camouflage. Sensory systems of planktonic stages include photo-, mechano- and chemoreceptors controlled by a highly evolved nervous system that follows the general pattern described for adult cephalopods. On settlement, a major metamorphosis occurs in morphology, physiology and behaviour. Morphological changes associated with the settlement process include positive allometric arm growth; chromatophore, iridophore and leucophore genesis; development of skin sculptural components and a horizontal pupillary response. At the same time, animals lose the Kölliker organs that cover the body surface, the ‘lateral line system’ and the oral denticles of the beaks. Strong positive phototaxis is a common response for hatchlings and some later paralarval stages but this response reduces, disappears or reverses after settlement. There are many gaps in our knowledge of the planktonic phases of benthic octopuses. Most of our understanding of octopus paralarvae comes from studies of just two species (Octopus vulgaris and Enteroctopus dofleini) and knowledge of the vast majority of benthic octopus species with planktonic stages is considered rudimentary or non-existent. Research is needed in a variety of fields, from taxonomy to ecology. Studies of feeding and nutrition are critical in order to develop the nascent aquaculture of key species and ageing studies are necessary to understand planktonic population dynamics,particularly in commercially valuable species targeted by fisheries. Current and potential anthropogenic impacts on these early life stages of octopuses, such as pollution, overfishing and global warming, are also identified.

Description: Reproductive features of the poorly known oceanic squid Octopoteuthis sicula are described and quantified to gain insight into the reproductive biology of the species. The data are based on 39 complete and partial specimens from southern African waters, collected between 1975 and 2005. The specimens ranged in mantle length from 38 mm to 290 mm and included juveniles and mature females and males. The species shows female-biased sexual size dimorphism. Ovulation is asynchronous, indicating a repeated spawning strategy. Males transfer spermatophores presumably by using their long terminal organ. Spermatangia (discharged spermatophores) were found implanted in several parts of the body in both females and males, including in the anterior dorsal and ventral rugose, semi-gelatinous mantle tissue of maturing and mature females. This modified mantle tissue was only well developed in females. The morphologies of the spermatophore and the spermatangium of O. sicula are described. The spermatophoric reaction is reconstructed, using various stages of discharge, to provide insight into the process of intradermal implantation of spermatangia of this species.

Description: To construct in situ velocity-porosity relationships for oceanic basalt, considering crack features, P- and S-wave velocity measurements on basaltic samples obtained from the eastern flank of the Juan de Fuca Ridge were carried out under confining pressures up to 40 MPa. Assuming that the changes in velocities with confining pressures are originated by micro-crack closure, we estimated micro-crack aspect ratio spectra using the Kuster-Toksöz theory. The result demonstrates that the normalised aspect ratio spectra of the different samples have similar characteristics. From the normalised aspect ratio spectrum, we then constructed theoretical velocity-porosity relationships by calculating an aspect ratio spectrum for each porosity. In addition, by considering micro-crack closure due to confining pressure, a velocity-porosity relationship as a function of confining pressure could be obtained. The theoretical relationships that take into account the aspect ratio spectra are consistent with the observed relationships for over 100 discrete samples measured at atmospheric pressure, and the commonly observed pressure dependent relationships for a wide porosity range. The agreement between the laboratory-derived data and theoretically estimated values demonstrates that the velocity-porosity relationships of the basaltic samples obtained from the eastern flank of the Juan de Fuca Ridge, and their pressure dependence, can be described by the crack features (i.e. normalised aspect ratio spectra) and crack closure.

Description: This review about the genus Laminaria sensu lato summarizes the extensive literature that has been published since the overview of the genus given by Kain in 1979. The recent proposal to divide the genus into the two genera Laminaria and Saccharina is acknowledged, but the published data are discussed under a 'sensu lato' concept, introduced here. This includes all species which have been considered to be 'Laminaria' before the division of the genus. In detail, after an introduction the review covers recent insights into phylogeny and taxonomy, and discusses morphotypes, ecotypes, population genetics and demography. It describes growth and photosynthetic performance of sporophytes with special paragraphs on the regulation of sporogenesis, regulation by endogenous rhythms, nutrient metabolism, storage products, and salinity tolerance. The biology of microstages is discussed separately. The ecology of these kelps is described with a focus on stress defence against abiotic and biotic factors and the role of Laminaria as habitat, its trophic interactions and its competition is discussed. Finally, recent developments in aquaculture are summarized. In conclusion to each section, as a perspective and guide to future research, we draw attention to the remaining gaps in the knowledge about the genus and kelps in general.

Description: For many coastal areas of the world, a decrease in abundance and depth penetration of perennial macroalgae and seagrasses has been documented and attributed to eutrophication. A surplus of nutrients impairs perennial seaweeds in at least two ways: increased phytoplankton densities reduce the depth penetration of light and in addition filamentous seaweeds and microalgae growing epiphytically shade their perennial hosts. A reduction of depth limit and total abundance has also been observed for the brown seaweed Fucus vesiculosus at many sites in the Baltic Sea. However, in most cases the mechanistic reason for the loss of Fucus has been deduced from observations rather than from experimental evidence. Here, we present results of a two-factorial (water depth/light supply and epibionts) experiment that was run in the Kiel Fjord, western Baltic, from August to October 2005. Performance of F. vesiculosus was recorded by growth and chlorophyll measurements, PI-curves and in situ measurements of the photosynthetic activity as the relative rate of electron transport (rETR). rETR and growth decreased with water depth. Chlorophyll a concentrations increased with reduced light intensities, but this apparently could not compensate for the light deficiency. Epibionts enhanced the negative effect of reduced light conditions on growth. According to these findings we estimated the physiological depth limit of F. vesiculosus in the Kiel Fjord to lie between 4 and 6 m water depth.

Description: This article analyzes the legal status of unmanned instruments (particularly, floats and gliders) for observation purposes in the ocean environment. These new kinds of instruments are being deployed by the thousands into the oceans, not the least as part of the Argo Project of the International Oceanographic Commission. Their uncontrolled drifting has raised legal questions, especially when such instruments enter waters subject to the jurisdiction of foreign states. The authors argue that the current international legal framework is insufficient to address the pertinent issues, and that a new legal regime is needed.

Description: A novel actinomycete, designated strain YIM 46034(T), was isolated from an evergreen broadleaved forest at Menghai, in southern Yunnan Province, China. Phenotypic characterization and 16S rRNA gene sequence analysis indicated that the strain belonged to the family Micromanosporaceae. Strain YIM 46034(T) showed more than 3% 16S rRNA gene sequence divergence from recognized species of genera in the family Micromonosporaceae. Characteristic features of strain YIM 46034(T) were the production of two types of spores, namely motile spores, which were formed in sporangia produced on substrate mycelia, and single globose spores, which were observed on short sporophores of the substrate mycelia. The cell wall contained meso-diaminopimelic acid, glycine, arabinose and xylose, which are characteristic components of cell-wall chemotype 11 of actinomycetes. Phosphatidylethanolamine was the major phospholipid (phospholipid type 11). Based on morphological, chemotaxonomic, phenotypic and genetic characteristics, strain YIM 46034(T) is considered to represent a novel species of a new genus in the family Micromonosporaceae, for which the name Planosporangium flavigriseum gen. nov., sp. nov. is proposed. The type strain of Planosporangium flavigriseum is YIM 46034(T) (=CCTCC AA 205013(T) =DSM 44991(T)).

Description: The deep-sea smelt Bathylagus euryops, caught in July 2004 at the Charlie-Gibbs Fracture Zone (CGFZ) of the Mid-Atlantic Ridge (North Atlantic), was studied for metazoan parasites and diet composition. A total of 86 specimens with standard lengths between 6.4 and 22.1 cm (mean 13.6 cm) were examined. The parasite fauna consisted of five species: three Digenea, one Cestoda and one Nematoda. The predominant parasites were Lecithaster sp. (Digenea) and an unidentified bothriocephalidean cestode. The only nematode, Anisakis sp., occurred with a low prevalence. Bathylagus euryops at CGFZ serves as final host for the three digeneans, and as intermediate host for the cestodes and Anisakis sp. Stomach content analysis revealed a mesozooplankton crustacean diet, while 95.3% of the stomachs contained unidentified tissue.

Description: The Central Indian Ocean Basin (CIOB) is the most studied basin in the Indian Ocean because of the Indian Manganese Nodules program. During the last two and half decades (and also on going), immense efforts have been made to investigate the nodule domain so as to locate the first generation nodule mine field. Over 4 million sq.km of the sea floor in the CIOB was surveyed using different samplers and echo sounders (single and multibeam). The basic requirement to identify the mine site was the abundance of the nodules (weight in kg/m2), grade of the nodule (i.e., combined percentage of Ni + Cu + Co) and the topography of the area. Various aspects related with nodules have been inspected resulting in a number of research publications, and a model derived for the growth and location of mineable ferromanganese deposits in the CIOB. Besides the ferromanganese deposits, this paper also deals with the physiographic features (seamounts, fracture zones), sediment types and on a variety of volcanics and hydrothermal materials recovered from the CIOB. It is inferred that the volcanics constitute an important part of the basin and have influenced the growth of the ferromanganese deposits. We observe that in the CIOB the presence of seamounts, types of volcanics, episodes of volcanism and altered products vis-à-vis the distribution of ferromanganese deposits are intrinsically woven and complement one another.

Description: Based upon the molecular and isotopic composition of hydrocarbons it has been proposed that the source of CH4 in Gulf of Cadiz mud volcanoes (MV) is a mixture of deep sourced thermogenic CH4 and shallow biogenic CH4. We directly investigated this possibility by comparing porewater CH4 concentrations and their δ13Cvalues with the potential for Archaeal methanogenesis in Gulf of Cadiz mud volcano (MV) sediments (Captain Arutyunov, Bonjardim, Ginsburg and Porto) using 14C-rate measurements. The CH4 has a deep sourced thermogenic origin (δ13C ∼ −49‰) but becomes 13C-depleted in and beneath the zone of anaerobic oxidation of methane (AOM) where the rates of hydrogenotrophic methanogenesis increase. Thus we infer that a portion of AOMproduced CO2 is being recycled to CH4 by methanogens yielding further 13C-depleted CH4, which might be misinterpreted as indicative of a fully shallow biogenic origin for this gas. Production of H2 is related to compositional changes in sedimentary organic matter, or to upward flux of substrate-enriched fluids. In contrast to otherMVsin the Gulf of Cadiz, GinsburgMVfluids are enriched in SO2−4 and contain very high concentrations of acetate (2478 μM below 150 cmbsf); however, the high levels of acetate did not stimulate methanogenesis but instead were oxidized to CO2 coupled to sulphate reduction. Both anaerobic oxidation of thermogenic CH4 linked to shallow methanogenesis and fluid geochemistry control the recycling of deep-sourced carbon at Gulf of Cadiz MVs, impacting near-surface δ13C-CH4 values.

Description: Force chain buckling, leading to unjamming and shear banding, is examined quantitatively via a discrete element analysis of a two-dimensional, densely-packed, cohesionless granular assembly subject to quasistatic, boundary-driven biaxial compression. A range of properties associated with the confined buckling of force chains has been established, including: degree of buckling, buckling modes, spatial and strain evolution distributions, and relative contributions to non-affine deformation, dilatation and decrease in macroscopic shear strength and potential energy. Consecutive cycles of unjamming–jamming events, akin to slip–stick events arising in other granular systems, characterize the strain-softening regime and the shear band evolution. Peaks in the dissipation rate, kinetic energy and local non-affine strain are strongly correlated: the largest peaks coincide with each unjamming event that is evident in the concurrent drops in the macroscopic shear stress and potential energy. Unjamming nucleates from the buckling of a few force chains within a small region inside the band. A specific mode of force chain buckling, prevalent in and confined to the shear band, leads to above-average levels of local non-affine strain and release of potential energy during unjamming. Ongoing studies of this and other buckling modes from a structural stability standpoint serve as the basis for the formulation of internal variables and associated evolution laws, central to the development of thermomicromechanical constitutive theory for granular materials.

Description: A simple unified critical state constitutive model for bonded geomaterials is presented in this paper. The model, which is called CASM-n, is an enhancement of an existing unified critical state model for reconstituted geomaterials (CASM). Characteristic behaviours of a bonded geomaterial such as the pre-yield higher strength and stiffness and the cohesive–frictional shearing mode in the post-yield region are taken into account and included in the reference model. The salient feature of the proposed model is the incorporation of cohesive component into the stress–dilatancy relationship. Consideration of the contribution of cohesion to plastic flow allows the modelling of delayed dilatancy and softening–contraction behaviour, which are two interesting phenomena observed in bonded geomaterials.

Description: Tropical cyclones (TC) under different climate conditions in the Northern Hemisphere have been investigated with the Max Planck Institute (MPI) coupled (ECHAM5/MPI-OM) and atmosphere (ECHAM5) climate models. The intensity and size of the TC depend crucially on resolution with higher wind speed and smaller scales at the higher resolutions. The typical size of the TC is reduced by a factor of 2.3 from T63 to T319 using the distance of the maximum wind speed from the centre of the storm as a measure. The full three-dimensional structure of the storms becomes increasingly more realistic as the resolution is increased. For the T63 resolution, three ensemble runs are explored for the period 1860 until 2100 using the IPCC SRES scenario A1B and evaluated for three 30 yr periods at the end of the 19th, 20th and 21st century, respectively. While there is no significant change between the 19th and the 20th century, there is a considerable reduction in the number of the TC by some 20% in the 21st century, but no change in the number of the more intense storms. Reduction in the number of storms occurs in all regions. A single additional experiment at T213 resolution was run for the two latter 30-yr periods. The T213 is an atmospheric only experiment using the transient sea surface temperatures (SST) of the T63 resolution experiment. Also in this case, there is a reduction by some 10% in the number of simulated TC in the 21st century compared to the 20th century but a marked increase in the number of intense storms. The number of storms with maximum wind speeds greater than 50 m s−1 increases by a third. Most of the intensification takes place in the Eastern Pacific and in the Atlantic where also the number of storms more or less stays the same. We identify two competing processes effecting TC in a warmer climate. First, the increase in the static stability and the reduced vertical circulation is suggested to contribute to the reduction in the number of storms. Second, the increase in temperature and water vapour provide more energy for the storms so that when favourable conditions occur, the higher SST and higher specific humidity will contribute to more intense storms. As the maximum intensity depends crucially on resolution, this will require higher resolution to have its full effect. The distribution of storms between different regions does not, at first approximation, depend on the temperature itself but on the distribution of the SST anomalies and their influence on the atmospheric circulation. Two additional transient experiments at T319 resolution where run for 20 yr at the end of the 20th and 21st century, respectively, using the same conditions as in the T213 experiments. The results are consistent with the T213 study. The total number of TC were similar to the T213 experiment but were generally more intense. The change from the 20th to the 21st century was also similar with fewer TC in total but with more intense cyclones.

Description: Two coccoid phototrophic purple sulfur bacteria were isolated from marine habitats (marine aquaculture pond near Bheemli, Visakhapatnam and marine tidal waters from a fishing harbour, Kakinada) in a medium that contained 3 % NaCl (w/v). Strains JA132T and JA130T are Gram-negative, motile cocci with a single flagellum. Both have an obligate requirement for NaCl. Intracellular photosynthetic membranes are of the vesicular type. Bacteriochlorophyll a and most probably carotenoids of the spirilloxanthin series were present as photosynthetic pigments. Both strains were able to grow photolithoautotrophically and photolithoheterotrophically. Chemotrophic and fermentative growth could not be demonstrated. There is no vitamin requirement for strain JA132T, while strain JA130T requires niacin, biotin and pantothenate as growth factors. Phylogenetic analysis on the basis of 16S rRNA gene sequences showed that both strains cluster with species of the genus Thiorhodococcus belonging to the Gammaproteobacteria. The DNA G+C contents of strains JA132T and JA130T were 65.5 and 57.5 mol%, respectively. Based on the 16S rRNA gene sequence analysis, morphological and physiological characteristics, strains JA132T and JA130T are significantly different from each other and from other species of the genus Thiorhodococcus and are recognized as two novel species, for which the names Thiorhodococcus bheemlicus sp. nov. and Thiorhodococcus kakinadensis sp. nov. are proposed. The type strains of T. bheemlicus sp. nov. and T. kakinadensis sp. nov. are JA132T (=MTCC 8120T=ATCC BAA-1362T=JCM 14149T=DSM 18805T) and JA130T (=ATCC BAA-1353T=DSM 18858T=JCM 14150T), respectively

Description: A rod-shaped, phototrophic, purple sulfur bacterium, strain JA124(T), was isolated in pure culture from a marine aquaculture pond, located near Bhimunipatnam, in a medium that contained 3 % NaCl (w/v). Strain JA124(T) is a Gram-negative, motile rod with a single polar flagellum. Strain JA124(T) has a requirement for NaCl, with optimum growth at 1.5-8.5 %, and tolerates up to 11 % NaCl. Intracellular photosynthetic membranes are of the vesicular type. Bacteriochlorophyll a and probably carotenoids of the spirilloxanthin series are present as photosynthetic pigments. Strain JA124(T) was able to utilize sulfide, sulfate, thiosulfate, sulfite, thioglycollate and cysteine as sulfur sources. Strain JA124(T) was able to grow photolithoautotrophically, photolithoheterotrophically and photo-organoheterotrophically. Chemotrophic and fermentative growth could not be demonstrated. Strain JA124(T) lacks diazotrophic growth and acetylene reduction activity. Pyridoxal phosphate is required for growth. During growth on reduced sulfur sources as electron donors, sulfur is deposited intermediately as a number of small granules within the cell. Phylogenetic analysis on the basis of 16S rRNA gene sequences showed that strain JA124(T) clusters with species of the genus Marichromatium belonging to the class Gammaproteobacteria. The highest sequence similarities of strain JA124(T) were found with the type strains of Marichromatium indicum (98 %), Marichromatium purpuratum (95 %) and Marichromatium gracile (93 %). However, DNA-DNA hybridization with Marichromatium indicum DSM 15907(T) revealed relatedness of only 65 % with strain JA124(T). The DNA base composition of strain JA124(T) was 67 mol% G+C (by HPLC). Based on 16S rRNA gene sequence analysis, morphological and physiological characteristics and DNA-DNA hybridization studies, strain JA124(T) (=ATCC BAA-1316(T)=JCM 13911(T)) is sufficiently different from other Marichromatium species to merit its description as the type strain of a novel species, Marichromatium bheemlicum sp. nov.

Description: A Gram-negative, rod-shaped, phototrophic bacterium (JA181T) was isolated from a tidal water sample. On the basis of 16S rRNA gene sequence similarity, strain JA181T was shown to belong to the class Alphaproteobacteria, most closely related to Rhodovulum sulfidophilum (97.8 % similarity to the type strain), Rhodovulum adriaticum (93 %), Rhodovulum robiginosum (93 %), Rhodovulum iodosum (94 %), Rhodovulum imhoffii (94 %), Rhodovulum strictum (95 %), Rhodovulum euryhalinum (94.6 %) and Rhodovulum marinum (94.6 %). DNA–DNA hybridization with Rdv. sulfidophilum DSM 1374T (relatedness of 39 % with strain JA181T) and physiological and biochemical tests allowed genotypic and phenotypic differentiation of strain JA181T from the eight Rhodovulum species with validly published names. Strain JA181T therefore represents a novel species, for which the name Rhodovulum visakhapatnamense sp. nov. is proposed (type strain JA181T =JCM 13531T =ATCC BAA-1274T =DSM 17937T).

Description: A novel isolate belonging to the genus Streptomyces, strain YIM 47672(T), was obtained from soil from Hainan, an island in China. The characterization of this isolate was performed by using a polyphasic approach. The strain formed long spore chains in the aerial mycelia. The cell wall contained L-diaminopimelic acid, traces of meso-diaminopimelic acid and glycine. Whole-cell hydrolysates contained galactose and xylose. The phospholipid was of type II. The 16S rRNA gene sequence similarities for YIM 47672(T) with respect to the most closely related type strains of species of the genus Streptomyces were less than 96.3%. Therefore strain YIM 47672(T) represents a novel member of the genus Streptomyces, for which the name Streptomyces hainanensis sp. nov. is proposed. The type strain is YIM 47672 (T) (=CCTCC AA 205017(T) = DSM 41 900(T)).

Description: A pink-pigmented, phototrophic, purple nonsulfur bacterium, strain JA173T, was isolated in pure culture from a saltern in Gokarna, India, in a medium containing 2 % (w/v) NaCl. Strain JA173T was a non-motile Gram-negative rod that multiplied by budding. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain JA173T clusters with the class Alphaproteobacteria; highest sequence similarity (98 %) was to the type strain of Rhodobium orientis and 94 % similarity was observed to the 16S rRNA gene sequence of the type strain of Rhodobium marinum. However, DNA–DNA hybridization with R. orientis DSM 11290T revealed a relatedness value of only 35.1 % with strain JA173T. Strain JA173T contained lamellar internal membranes, bacteriochlorophyll a and carotenoids of the spirilloxanthin series. Strain JA173T had an obligate requirement for NaCl (optimum growth at 2–6 %, w/v) and grew photoheterotrophically with a number of organic compounds as carbon source or electron donor. Photoautotrophic, chemoautotrophic and fermentative growth could not be demonstrated. Yeast extract was required for growth. Based on 16S rRNA gene sequence analysis, DNA–DNA hybridization data and morphological and physiological characteristics, strain JA173T is sufficiently different from other species of the genus Rhodobium to be recognized as a representative of a novel species, Rhodobium gokarnense sp. nov. The type strain is JA173T (=ATCC BAA-1215T=DSM 17935T=JCM 13532T).

Description: The measurements of dissolved organic carbon (DOC) and total dissolved nitrogen (TDN) in seawater are key in global change and coastal eutrophication studies. Nowadays, the high-temperature combustion (HTC) technique is a widely used method for DOC and TDN analysis. However, uncertainties exist about the operation of the catalyst in the conversion process of DOC and TDN in the HTC method. In this study, five different 'catalyst' materials were tested for their blanks, calibration slopes, and conversion efficiency of DOC and TDN using the Shimadzu TOC 5000A total organic carbon analyser coupled to a Sievers NCD 255 nitrogen chemiluminescence detector. The materials included four metallic catalysts (Shimadzu and Johnson 0.5 Pt-alumina, 13 Cu(II)O-alumina, 0.5 Pd-alumina) and quartz beads. The results indicated that DOC blank signals for the HTC approach using metallic catalysts with an alumina support are higher compared with quartz beads, as a result of the amphoteric nature of the alumina. However, the slopes of the standard calibration graphs were lowest for DOC and TDN determinations on the quartz beads. The DOC recoveries for the metallic catalysts were close to 100 for all compounds tested, with the exception of ammonium pyrrolidine dithiocarbamate. Using quartz beads, poor recoveries were obtained for a range of organic compounds, including the commonly used calibration compounds potassium hydrogen phthalate and glycine. The TDN recoveries for all compounds were typically >90, with the exception of NaNO2. Furthermore, analysis using the CuO-alumina and Pd-alumina catalysts and quartz beads showed low recoveries for NH4Cl. This study showed that catalyst performance should be verified on a regular basis using model compounds and blank checks made during every run, and that the Shimadzu 0.5 Pt-alumina material was an efficient catalyst for DOC and TDN analyses using the coupled total organic carbon-nitrogen chemiluminescence detector (TOC-NCD) analyser. © 2007 Taylor & Francis.

Description: Data from two cross-shelf sediment sampling cruises were used to explain reasons for the sediment biogeochemical variability in respect of carbon, nitrogen and sulphur, and how the cycling of these elements governs the biogeochemistry of the overlying water through their control of the redox conditions. The spatial extent of this benthic–pelagic flux link is limited to the innershelf mud belt system on the Namibian shelf. The inshore mud belt is the primary deposition area of the carbon and nitrogen new production export flux. The offshore organic-rich zones are thought to be relict particulate organic matter originating from the inshore mud belt rather than from an overlying pelagic source. These data were used to set up a multi-layer sediment model that was used through sensitivity analyses to elucidate the input characteristics that result in the most significant feedbacks on hypoxia in the overlying water. The analyses showed that, although the new production flux is a requirement to drive an oxygen demand in the sediments, the onset and persistence of anoxia may depend critically on a low-oxygen boundary condition threshold. This is thought to be a key differentiating factor between systems that, despite comparable carbon export fluxes, are characterised by a persistent hypoxia/anoxia signal and those that are characterised by episodic hypoxia events. It was concluded that sediment oxygen demand and methane and 'sulphide' emissions from the central Benguela sediments are responses to external hypoxia boundary conditions rather than the local drivers of oxygen variability.

Description: The functional response of Sepia officinalis early stages, preying on mysids of the species Mesopodopsis slabberi was investigated. The effects of five prey densities (12.5, 25, 37.5, 50 and 125 mysids l−1) and two hatchling ages (1-day-old and 7-day-old) on consumption rate and the frequency of non-feeding animals were tested. Older animals were approximately 50% heavier than newly hatched ones. Hatchlings were individually assayed under 0.25 W m−2 natural light, 37.8 psu in salinity and 19°C. The effect of prey density on consumption rate was highly significant and no effect of age was detected within the age range tested. Maximal values recorded for consumption rate were about 0.45 mysids h−1. The frequency of non-feeding individuals was strongly reduced at saturating prey densities. The functional response curve showed an interval of prey densities for which density-dependent prey mortality is probable.

Description: We report data on the stomach contents of the long‐finned pilot whale, Globicephala melas, recovered from a group of whales stranded on Ruakaka Beach, northeastern New Zealand, in November 2006. In nine whales for which identifiable stomach contents were recovered (three that stranded on 10 November and six that stranded on 11 November) prey remains comprised exclusively cephalopod beaks attributed to five squid species. The stomachs of a further two whales contained unidentifiable upper beaks only, while the stomachs of five whales were completely empty. No whale appeared to have been satiated immediately before stranding, given that the maximum biomass of prey recently consumed by any one whale was calculated to be 〈5 kg. All squids ingested represented oceanic species, found from 50 to 1000 m but more common towards the deeper end of this range. These data both complement and contrast with the only other dietary information available for this species in New Zealand waters, reported from stomach contents of whales stranded on Farewell Spit, South Island in December 2005.

Description: Stomach contents of the long‐finned pilot whale, Globicephala melas, are reported for the first time from New Zealand waters. Analyses based on two male and three female whales (2.5–5.3 m in length) that stranded on Farewell Spit, Golden Bay, South Island in December 2005 revealed a diet comprised exclusively of cephalopods (2-33 lower cephalopod beaks per stomach). Two genera of cephalopod from two orders; arrow squid, Nototodarus spp. (Teuthoidea: Ommastrephidae), and common octopus, Pinnoctopus cordiformis (Octopoda: Octopodidae) were represented. A further five pilot whale stomachs were examined and found to be empty.

Description: A rod-shaped, phototrophic, purple non-sulfur bacterium was isolated in pure culture from seawater collected from the seashore of Visakhapatnam, on the east coast of India, in a medium that contained 2 % NaCl (w/v). Strain JA123(T) was Gram-negative and non-motile and had a requirement for NaCl. Photo-organoheterotrophic and chemo-organoheterotrophic growth occurred with organic compounds as carbon sources and electron donors. Photolithoautotrophic, chemolithoautotrophic and fermentative growth could not be demonstrated. Strain JA123(T) contained vesicular intracellular photosynthetic membrane structures. Bacteriochlorophyll a and probably carotenoids of the spheroidene series were present as photosynthetic pigments. Biotin was required for growth. Phylogenetic analysis on the basis of 16S rRNA gene sequences showed that strain JA123(T) clustered with species of the genus Rhodobacter. Based on 16S rRNA gene sequence analysis and morphological and physiological characteristics, strain JA123(T) is sufficiently different from other Rhodobacter species to propose a novel species, Rhodobacter vinaykumarii sp. nov., to accommodate this strain; the type strain is JA123(T) (=DSM 18714(T) =JCM 14544(T) =CCUG 54311(T)).

Description: A variety of methods were successfully applied to examine the efficacy of a modular ballast water system according to the standards as adopted by the International Maritime Organization. The ballast water treatment system had a capacity of 530 m3 h−1 consisted of a pump system, a hydrocyclone, a 50 μm mesh-size self-cleaning filter and an installation for the addition of a chemical disinfectant (PERACLEAN® Ocean). The land-based testing facility used natural sea water of high turbidity during the spring phytoplankton bloom. The mesozooplankton fraction was inspected with a standard binocular. Larger zooplankton were effectively removed with the filter; the smaller sized fraction containing larvae and nauplia were killed after chemical treatment. The phytoplankton component was monitored using flow cytometry. The huge colonies of the phytoplankton Phaeocystis globosa were disrupted in the hydrocyclone liberating the colony cells which passed as single cells through the filter. These cells remained viable but were finally killed in the secondary (chemical) step. Bacteria also passed all mechanical treatment steps unharmed but were killed in the final step. Viability tests with SYTOX Green, which were specifically designed for phytoplankton, showed that mechanical treatment did not affect the percentage of viable cells a short-term, but after several hours the viable cell counts dropped down to 70%. Phytoplankton cells recovered within a single day and formed a new dense bloom rapidly. The bacteriostatic component of the chemical disinfectant (H2O2) remained present for several days preventing regrowth of bacteria for up to 15 days after addition. In conclusion, the IMO standards were met using the modular ballast water treatment unit and the applied instruments and assays were effective and rapid tools to qualify and quantify the organisms present as well as their viability.

Description: A marine bacterium, strain Pol012T, was isolated from the Mediterranean sponge Axinella polypoides and subsequently characterized as belonging to subphylum 1 of the phylum ‘Verrucomicrobia’. Strain Pol012T was non-motile, Gram-negative, coccoid or rod-shaped and red in colour. The menaquinones MK-8 and MK-9 were detected. The G+C content of the genomic DNA was 50.9 mol%. Growth was possible at temperatures between 8 and 30 °C and at pH values between 6.8 and 8.2. The closest cultured relative of strain Pol012T was Akkermansia muciniphila (83 % sequence similarity), while the closest environmental 16S rRNA gene sequence was the marine clone Arctic96BD-2 (95 % sequence similarity). Strain Pol012T is the first marine pure-culture representative of ‘Verrucomicrobia’ subphylum 1 and represents a novel genus and species, for which the name Rubritalea marina gen. nov., sp. nov. is proposed. The type strain is Pol012T (=DSM 177716T=CIP 108984T). The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain Pol012T is DQ302104, and those for verrucomicrobial 16S rRNA gene sequences from sponges and seawater are DQ302105–DQ302120.

Description: Bacterial strains UST030701-097T and UST030701-084T were isolated from a marine sponge in the Bahamas. Both strains were pink-pigmented, Gram-negative, strictly aerobic and chemo-organotrophic. Cells of strain UST030701-097T were short, curved rods with fast-gliding motility, whereas those of strain UST030701-084T were straight rods with a less rapid gliding motion. The two strains had MK-7 as the major respiratory quinone and did not produce flexirubin-type pigments. The DNA G+C contents of strains UST030701-097T and UST030701-084T were 42.5 and 43.7 mol%, respectively. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the two strains belonged to the family 'Flexibacteraceae' of the phylum Bacteroidetes. 16S rRNA gene sequence similarity between strains UST030701-097T and UST030701-084T was 95.0 %; their closest relative was [Marinicola] seohaensis, with 93.3 % and 96.0 % sequence similarity, respectively. Phylogenetic tree topology indicated that the two strains belonged to the same lineage, but were on separate branches. Whilst strain UST030701-084T and [Marinicola] seohaensis were found on one branch, strain UST030701-097T was in another branch that had no species with validly published names. Based on the polyphasic taxonomic data obtained in the present study, we propose that strain UST030701-097T represents a novel genus and that strain UST030701-084T represents a novel species in the phylum Bacteroidetes. The genus Fabibacter gen. nov. is proposed, with strain UST030701-097T (=NRRL B-41220T=JCM 13334T) as the type strain of the type species, Fabibacter halotolerans sp. nov. Strain UST030701-084T (=NRRL B-41219T=JCM 13337T) is proposed as the type strain of Roseivirga spongicola sp. nov. In an earlier study, it was suggested that the genus Marinicola is a later heterotypic synonym of the genus Roseivirga. However, a formal proposal to reclassify [Marinicola] seohaensis, the only member of the genus Marinicola, has not yet been made. The results of phylogenetic analyses in this study support the reclassification of [Marinicola] seohaensis as Roseivirga seohaensis comb. nov.

Description: Shells of the blue mussel Mytilus edulis remain free of fouling organisms as long as they possess an intact periostracum, and a multiple antifouling defence that comprises a ripple-like microtopography and the production of chemical antifouling compounds has been suggested previously. This study investigates the chemical defence strategy of blue mussels for the first time. Six crude extracts of the periostracum of intact shells were made using solvents of increasing polarity. These extracts were tested against common fouling organisms in laboratory based bioassays. Non-polar and moderately polar fractions showed the highest activities: the diethyl ether fraction strongly inhibited attachment of Balanus amphitrite cyprids and the marine bacteria Cobetia marina and Marinobacter hydrocarbonoclasticus. Attachment of the benthic diatom Amphora coffeaeformis was significantly reduced by the dichloromethane extract, whereas both ethyl acetate and diethyl ether fractions slowed diatom growth. These results provide the first evidence of surface bound compounds that may moderate surface colonisation.

Description: A brown-coloured bacterium was isolated from photoheterotrophic (benzoate) enrichments of flooded paddy soil from Andhra Pradesh, India. On the basis of 16S rRNA gene sequence analysis, strain JA2(T) was shown to belong to the class Betaproteobacteria, related to Rubrivivax gelatinosus (99 % sequence similarity). Cells of strain JA2(T) are Gram-negative, motile rods with monopolar single flagella. The strain contained bacteriochlorophyll a and most probably the carotenoids spirilloxanthin and sphaeroidene, but did not have internal membrane structures. Intact cells had absorption maxima at 378, 488, 520, 590, 802 and 884 nm. No growth factors were required. Strain JA2(T) grew on benzoate, 2-aminobenzoate (anthranilate), 4-aminobenzoate, 4-hydroxybenzoate, phthalate, phenylalanine, trans-cinnamate, benzamide, salicylate, cyclohexanone, cyclohexanol and cyclohexane-2-carboxylate as carbon sources and/or electron donors. The DNA G+C content was 74.9 mol%. Based on DNA-DNA hybridization studies, 16S rRNA gene sequence analysis and morphological and physiological characteristics, strain JA2(T) is different from representatives of other photosynthetic species of the Betaproteobacteria and was recognised as representing a novel species, for which the name Rubrivivax benzoatilyticus sp. nov. is proposed. The type strain is JA2(T) (=ATCC BAA-35(T)=JCM 13220(T)=MTCC 7087(T)).

Description: Sea level changes in the Baltic Sea are dominated by internal, short-term variations that are mostly caused by the ephemeral nature of atmospheric conditions over the Baltic area. Tides are small and their influence decreases from western parts of the Baltic Sea to the Baltic Proper. Superimposed to the large short-term sea level changes (up to few decimeters from day to day) are seasonal and interannual variations (centimeters to decimeters). This study focuses on the comparison of sea surface heights obtained from observations and from a high resolution oceanographic model of the Baltic Sea. From this comparison, the accuracy of the modeled sea surface variations is evaluated, which is a necessary precondition for the further use of the oceanographic model in geodetic applications. The model reproduces all observed Baltic sea level variations very reliably with an accuracy of 5 to 9 cm (rms) for short-term variations (up to 2 months) and 8 cm (rms) for long-term variations (〉2 months). An additional improvement of the model can be attained by including long-period sea level variations of the North Sea. The model performs well also in the case of extreme sea level events, as is shown for a major storm surge that occurred at the southern coast of the Baltic Sea in November 1995.

Description: Strain UST040317-058(T), comprising non-pigmented, rod-shaped, facultatively anaerobic, Gram-negative cells that are motile by means of single polar flagella, was isolated from the surface of a marine sponge (Ircinia dendroides) collected from the Mediterranean Sea. Comparative 16S rRNA gene sequence-based phylogenetic analysis placed the strain in a separate cluster with the recognized bacterium Shewanella algae IAM 14159(T), with which it showed a sequence similarity of 95.0 %. The sequence similarity between strain UST040317-058(T) and its other (six) closest relatives ranged from 91.6 to 93.8 %. Strain UST040317-058(T) showed oxidase, catalase and gelatinase activities. The typical respiratory quinones for shewanellas, menaquinone MK-7 and ubiquinones Q-7 and Q-8, were also detected. The predominant fatty acids in strain UST040317-058(T) were i15 : 0, 16 : 0, 17 : 1omega8c and summed feature 3 (comprising i15 : 0 2-OH and/or 16 : 1omega7c), altogether representing 56.9 % of the total. The DNA G+C content was 39.9 mol%. The strain could be differentiated from other Shewanella species by its inability to reduce nitrate or produce H(2)S and by 10-22 additional phenotypic characteristics. On the basis of the phylogenetic and phenotypic data presented in this study, strain UST040317-058(T) represents a novel species in the genus Shewanella, for which the name Shewanella irciniae sp. nov. is proposed. The type strain is UST040317-058(T) (=JCM 13528(T)=NRRL B-41466(T)).

Description: Modern antifouling coatings use heavy metals and toxic organic molecules to prevent biofouling, the undesirable growth of marine organisms on man-made substrata. In an ongoing survey of deep-sea microorganisms aimed at finding low toxic antifouling metabolites, an actinomycete bacterium was isolated from the Pacific sediment at the depth of about 5000 m. The bacterium was closely related to Streptomyces fungicidicus (99% similarity) according to 16S ribosomal RNA sequence information. The spent culture medium of this bacterium inhibited barnacle larval attachment. Bioassay-guided fractionation was employed to isolate antifouling compounds. The ethyl acetate extract was fractionated by using an open silica gel column. Active fractions were further purified on a HPLC C18 column. Five diketopiperazines, cyclo-(L-Leu-L-Pro), cyclo-(L-Phe-L-Pro), cyclo-(L-Val-L-Pro), cyclo-(L-Trp-L-Pro), and cyclo-(L-Leu-L-Val) were isolated for the first time from a deep sea bacterium, and the structures of the compounds were elucidated by nuclear magnetic resonance spectroscopy and mass spectrometry. The pure diketopiperazines were tested for antilarval activity using the barnacle Balanus amphitrite. Effective concentrations that inhibited 50% larval attachment (EC50) after 24 h ranged from 0.10- 0.27 mM. The data suggest that diketopiperazines and other compounds from deep-sea bacteria may be used as novel antifoulants.

Description: A yellow-pigmented, Gram-negative, rod-shaped, strictly aerobic bacterium (strain UST050418-085(T)) was isolated from the surface of a marine sponge, Myxilla incrustans, at Friday Harbor, WA, USA. The DNA G+C content of this strain was 34.6 mol%. The predominant fatty acids were i15 : 0, a15 : 0, i15 : 1, i16 : 0, i17 : 0 3-OH, 17 : 0 2-OH and summed feature 3, comprising i15 : 0 2-OH and/or 16 : 1omega7c (altogether representing 69.0 % of the total fatty acids). MK-6 was the only respiratory quinone detected. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the closest relatives of UST050418-085(T) were members of the genus Gillisia, with sequence similarities of 93.2-96.6 %. Strain UST050418-085(T) differed from its closest relatives by 11 to 18 phenotypic traits. Molecular evidence and phenotypic characteristics suggest that strain UST050418-085(T) represents a novel species within the genus Gillisia. The name Gillisia myxillae sp. nov. is proposed, with UST050418-085(T) (=JCM 13564(T)=NRRL B-41416(T)) [corrected] as the type strain

Description: A novel purple sulfur bacterium, strain WS(T), was isolated from a microbial mat from an estuary of the White Sea. Individual cells are coccoid shaped, motile by flagella and do not contain gas vesicles. The mean cell diameter is 1.85 mum (range 1.5-2.0 mum). Cell suspensions exhibit a purple-violet colour. They contain bacteriochlorophyll a and carotenoids of the rhodopinal series as photosynthetic pigments. The novel bacterium is an anoxygenic photoautotroph, using sulfide, thiosulfate, sulfite and elemental sulfur as electron donors for photosynthesis and is capable of photoassimilating several organic carbon sources in the presence of carbonate and a reduced sulfur source (sulfide and/or thiosulfate). Sulfur globules, formed during oxidation of sulfide, are stored transiently inside the cells. Optimal salinity and pH for growth are at 0.5-2.0 % NaCl and pH 7.0-7.5. The DNA base composition of strain WS(T) is 61.8 mol% G+C. 16S rRNA gene sequence analysis showed that the new isolate belongs to the genus Thiorhodococcus, with Thiorhodococcus minor CE2203(T) as the nearest relative (sequence similarity of 97.3 %). Several distinct differences from described species necessitate the description of a novel species. Thiorhodococcus mannitoliphagus sp. nov. is the proposed name, with strain WS(T) (=ATCC BAA-1228(T)=VKM B-2393(T)) as the type strain.

Description: A yellow-pigmented, Gram-negative, slowly gliding, rod-shaped, strictly aerobic bacterium (UST040801-001T) was isolated from marine sediment. The DNA G+C content was 39?9 mol%. The predominant fatty acids were a15 : 0, i15 : 0, i15 : 0 3-OH, i17 : 1v9c, i17 : 0 3-OH and summed feature 3, comprising i15 : 0 2-OH and/or 16 : 1v7c (altogether representing 76?2% of the total). MK-6 was the only respiratory quinone. Flexirubin-type pigments were not produced. Phylogenetic analysis based on 16S rRNA gene sequences indicated that Gramella echinicola KMM 6050T (the only species in the genus) was the closest relative of UST040801-001T, sharing 98?0% sequence similarity. The DNA–DNA relatedness between UST040801-001T and Gramella echinicola KMM 6050T was 13 %. Strain UST040801-001T can be distinguished from G. echinicola by means of 11 phenotypic traits. The results of molecular and phenotypic analyses suggested that UST040801-001T represents a novel species of Gramella. The name Gramella portivictoriae sp. nov. is proposed for this bacterium, with UST040801-001T (=NRRL 41137T=JCM 13192T) as the type strain.

Description: Development of microbial biofilms and the recruitment of propagules on the surfaces of man-made structures in the marine environment cause serious problems for the navies and for marine industries around the world. Current antifouling technology is based on the application of toxic substances that can be harmful to the natural environment. For this reason and the global ban of tributyl tin (TBT), there is a need for the development of “environmentally-friendly” antifoulants. Marine microbes are promising potential sources of non-toxic or less-toxic antifouling compounds as they can produce substances that inhibit not only the attachment and/or growth of microorganisms but also the settlement of invertebrate larvae and macroalgal spores. However, so far only few antilarval settlement compounds have been isolated and identified from bacteria. In this review knowledge about antifouling compounds produced by marine bacteria and diatoms are summarised and evaluated and future research directions are highlighted.

Description: The purpose of this study was to monitor and evaluate the specific characteristics and properties of the most important water resources in Dalmatia, located in Southern Croatia, for a period of five years (1999–2003). The paper presents a detailed account of the water's chemical content, classification and concentration of salts. The bacteriological pollution levels are indicated by the total coliform bacterial levels (MPN coli/100 ml). The water characteristics are expressed by coefficients which represent the ratios between water ingredients. The Ca/Mg eq ratio, SO4/Cl eq ratio and K1, K2 for bicarbonate hardness were calculated. The hygienic characteristics of the water samples were expressed by the total coliform bacteria estimation (MPN coli/100 ml), the permanganate consumption (KMnO4) and biological oxygen demand (BOD5). Karst waters, i.e. rain waters, in Dalmatia are moderately hard, the SO4/Cl ratio is 0.38-1.6, non corrosive (K1 lower than 0.2) and not significantly mineralised (〈500 mg/L minerals). Sulfate waters are generally hard, the SO4/Cl ratio is higher than 1.6, K1 is 0.2-0.65. Marine waters are quite hard or hard, particularly at the river estuaries, the SO4/Cl ratio is lower than 0.38, and K1 is higher than 0.65. Rain water direction equation, marine direction equation and sulfate direction equation are calculated on the base of SO4/Cl ratio. The groundwater and springs in Dalmatia are less polluted than surface waters. A majority of the water observed, 24 of 42 locations, have geometric average values of MPN coli〈150/100 ml of water. This group includes the majority of springs in Dalmatia, as well as some sections of rivers studied. The highest bacteriological pollution was found at nine locations where MPN coli〉1000/100 ml. Moderate pollution was found at nine locations where MPN coli is between 150–1000/100 ml of water. The water in Dalmatia is quite safe and mainly preserves its natural properties.

Description: A study of Rossia macrosoma in Portuguese waters with emphasis on its biogeographical, biological and biochemical characteristics is presented. Approximately 1000 specimens collected in 32 cruises between 1990 and 2003 were used to determine the distribution and abundance of the species and some population biology parameters (weight, length, sex and maturation). The first biochemical characterization of the species at different stages of gonad development was made. The species was found at depths up to 860 m along the whole Portuguese coast. The sex ratio was approximately 1:1 and did not vary with depth or position along the coast (P≫0.05). Females grew larger (84:67 mm mantle length) and heavier (161:100 g total body weight) than males. Mature specimens of both sexes constituted 〈1% of all records. Immature and maturing specimens were found year round, without significant differences between female monthly distributions (P 〉 0.05). No significant difference between sexes in the distribution of maturity stages with depth or position along the coast was noted (P≫0.05). During sexual maturation there was a significant increase (P 〈 0.05) in total amino acid, protein, lipid and fatty acid contents in the gonad, but the allocation of these organic compounds from digestive gland and muscle was not evident. In the three tissues analysed, the major fatty acids were 16:0, 18:0, 18:1, 20:1, 20:4n-6, 20:5n-3 and 22:6n-3, the major essential amino acids were lysine, leucine and arginine and the major non-essential amino acids were glutamic acid, aspartic acid and serine.

Description: A visible pathological condition located in the arms and mantle of the Hubb octopus Octopus hubbsorum from the Northeast Pacific waters is described for the first time. Histological sections confirmed later stages (fibrosis) of a chronic inflammatory condition of unknown aetiology.

Description: Sexual dimorphism in size and morphology of the lower beak of the warty onychoteuthid squid Moroteuthis ingens is analysed. Beaks of maturing males exhibit a band of weak, clear cartilage across the shoulder region, while mature males exhibit a pronounced excavation of this area; the hood remains intact. Female beaks attain greater size, but relatively shorter lower rostral lengths (LRL) than those of males; they display neither the shoulder cartilage nor later erosion, but the hood is consistently eroded in mature specimens. The angle ridge in females is considerably longer than in males. Due to the difference in LRL relative to overall beak size, M. ingens beaks from predator stomachs should be sexed prior to calculating prey size using LRL; for both sexes, the LRL‐mantle length (ML) relationship is linear while the LRL‐weight relationship is exponential. Sex‐specific equations are provided for reconstructing ML and weight using LRL. Based on several incidences of male‐female pairs collected with beaks interlocked, M. ingens is postulated to mate in a head‐to‐head position, with both individuals incurring beak damage during the event.

Description: A long-synonymized species Benthoctopus normani (Massy 1907) (Cephalopoda: Octopodidae) is redescribed from material collected over 30 years by the National Oceanography Centre, Southampton and the National Museums of Scotland. It can be distinguished from other octopodid specimens found in deep waters of the Northeast Atlantic by its biserial suckers, lack of ink sac, and simple ligula, which lacks transverse ridges. Examination of the collections led to the identification of a new species of Benthoctopus from the Northeast Atlantic, which is described herein.

Description: A bacterial strain, UST030701-156T, was isolated from a marine sponge in the Bahamas. Strain UST030701-156T was orange-pigmented, Gram-negative, rod-shaped with tapered ends, slowly motile by gliding and strictly aerobic. The predominant fatty acids were a15 : 0, i15 : 0, i15 : 0 3-OH, i17 : 0 3-OH, i17 : 1ω9c and summed feature 3, comprising i15 : 0 2-OH and/or 16 : 1ω7c. MK-6 was the only respiratory quinone. Flexirubin-type pigments were not produced. Phylogenetic analysis based on 16S rRNA gene sequences placed UST030701-156T within a distinct lineage in the family Flavobacteriaceae, with 93·3 % sequence similarity to the nearest neighbour, Nonlabens tegetincola. The DNA G+C content of UST030701-156T was 41·0 mol% and was much higher than that of N. tegetincola (33·6 mol%). Strain UST030701-156T can be distinguished from other members of the Flavobacteriaceae by means of a number of chemotaxonomic and phenotypic characteristics. It is proposed, therefore, that UST030701-156T represents a novel taxon designated Stenothermobacter spongiae gen. nov., sp. nov. The type strain is UST030701-156T (=NRRL B-41138T=JCM 13191T). Carbon-source utilization by N. tegetincola was re-examined and an emended description is therefore included.

Description: A yellowish-brown bacterium was isolated from enrichment cultures inoculated with seawater samples from the eastern coast of India (Visakhapatnam) under photoheterotrophic conditions. Enrichment and isolation in a medium containing 2 % NaCl (w/v) yielded strain JA128T, which has ovoid to rod-shaped cells, also forms chains and is non-motile. Phylogenetic analysis on the basis of 16S rRNA gene sequences showed that strain JA128T clusters with the Alphaproteobacteria and the sequence similarity with its closest relatives, Rhodovulum iodosum and Rhodovulum sulfidophilum, was 95 %. Strain JA128T contained vesicular intracytoplasmic membranes, bacteriochlorophyll a and carotenoids of the spheroidene series. Strain JA128T was mesophilic, slightly acidophilic, slightly halophilic and grew photoheterotrophically with a number of organic compounds as carbon source and electron donor. It was unable to grow photoautotrophically, chemoautotrophically or by fermentative modes. It did not utilize sulfide, thiosulfate or hydrogen as electron donors. Thiamine was required as a growth factor. Based on the 16S rRNA gene sequence analysis, morphological and physiological characteristics, strain JA128T was significantly different from other species of the genus Rhodovulum and was recognized as a novel species for which the name Rhodovulum marinum sp. nov. is proposed. The type strain is JA128T (=ATCC BAA 1215T=CCUG 52183T=JCM 13300T).

Description: A new method of generating two-dimensional and three-dimensional cloud fields is presented, which share several important statistical properties with real measured cloud fields.Well-known algorithms such as the Fourier method and the Bounded Cascade method generate fields with a specified Fourier spectrum. The new iterative method allows for the specification of both the power spectrum and the amplitude distribution of the parameter of interest, e.g. the liquid water content or liquid water path. As such, the method is well suited to generate cloud fields based on measured data, and it is able to generate broken cloud fields. Important applications of such cloud fields are e.g. closure studies. The algorithm can be supplied with additional spatial constraints which can reduce the number of measured cases needed for such studies. In this study the suitability of the algorithm for radiative questions is evaluated by comparing the radiative properties of cloud fields from cloud resolving models of cumulus and stratocumulus with their surrogate fields at nadir, and for a solar zenith angle of 0◦ and 60◦. The cumulus surrogate clouds ended up to be identical to the large eddy simulation (LES) clouds on which they are based, except for translations and reflections. The root mean square differences of the stratocumulus transmittance and reflectance fields are less than 0.03% of the radiative budget. The radiances and mean actinic fluxes fit better than 2%. These results demonstrate that these LES clouds are well described from a radiative point of view, using only a power spectrum together with an amplitude distribution.

Description: The distribution of five dominant calanoid copepods was related to different water masses in the Angola-Benguela Front system. Five water bodies were identified by principal component analysis, on the basis of abiotic parameter such as temperature, salinity, dissolved oxygen, phosphate, silicate, nitrate and nitrite. These parameters were reduced to single factors and arranged along two principal component axes. The copepod species incuded females and copepodites C5 of Calanoides carinatus and females of Metridia lucens, Centropages brachiatus, Nannocalanus minor and Aetideopsis carinata. The water bodies identified in the frontal system were related to currents, upwelling processes, an oxygen minimum layer and biological modification. The different copepod species, as well as the two ontogenetic stages of C. carinatus, showed clear preference for specific water bodies, and their behavioural and physiological adaptations to the environment are discussed.

Description: Three new species of siphonophores (Rhodaliidae), a little known, uniquely benthic, family of Physonectae (Hydrozoa, Cnidaria), are described from specimens observed and collected at depths between 120 and 360 m off Indonesia and South Africa by the submersible JAGO. Special reference is made to in situ observations and video close‐ups that revealed detailed information on locomotory, fishing and feeding behaviour.

Description: A simple method for initializing coupled general circulation models (CGCMs) using only sea surface temperature (SST) data is comprehensively tested in an extended set of ensemble hindcasts with the Max-Planck-Institute (MPI) climate model, MPI-OM/ECHAM5. In the scheme, initial conditions for both atmosphere and ocean are generated by running the coupled model with SST nudged strongly to observations. Air–sea interaction provides the mechanism through which SST influences the subsurface. Comparison with observations indicates that the scheme is performing well in the tropical Pacific. Results from a 500-yr control run show that the model's El Niño Southern Oscillation (ENSO) variability is quite realistic, in terms of strength, structure and period. The hindcasts performed were six months long, initiated four times per year, consisted of nine ensemble members, and covered the period 1969–2001. The ensemble was generated by only varying atmospheric initial conditions, which were sampled from the initialization run to capture intraseasonal variability. At six-month lead, the model is able to capture all the major ENSO extremes of the period. However, because of poor sampling of ocean initial conditions and model deficiencies, the ensemble-mean anomaly correlation skill for Niño3 SST is only 0.6 at six-month lead. None the less, the results presented here demonstrate the potential of such a simple scheme, and provide a simple method by which SST information may be better used in more complex initialization schemes.

Description: Meteorite impacts cause conversion of kinetic energy into thermal energy. Part of this thermal energy is used to form a melt sheet, part is dissipated to heat the target rocks and these together with the hot rocks that elastically rebound from the depth of several kilometres (central uplift) activate hydrothermal circulation. Impact-generated hydrothermal systems have been documented from several impact structures world-wide. Three Australian examples—Shoemaker, Woodleigh and Yarrabubba—provide evidence of hydrothermal fluid flow both within and around the structures. Field observations, and petrographic and geochemical data suggest a common evolutionary trend of post-impact hydrothermal activity from early high-temperature alkali metasomatism to a later lower temperature H + metasomatism, resulting in the overprinting by hydrous mineral assemblages. Hydrothermal systems activated by meteorite-impact events are important because they may also form economic mineral deposits, as is documented for several impact structures in the world. A working model of hydrothermal circulation in terrestrial impact structures posits two main stages: (i) initial high-temperature fluids percolate downward causing widespread alkali metasomatism of the shattered target rocks below the melt sheet, resulting in their modification to rocks of syenitic affinity; and (ii) inflow of meteoric water and progressive cooling of the melt sheet leads to a lower temperature stage, in which hydrothermal fluid flow tends to move upward, resulting in mineral assemblages and alteration patterns that resemble those of epithermal systems. In addition, these fluids can discharge at the surface as hot springs.

Description: Meteorite impacts cause conversion of kinetic energy into thermal energy. Part of this thermal energy is used to form a melt sheet, part is dissipated to heat the target rocks and these together with the hot rocks that elastically rebound from the depth of several kilometres (central uplift) activate hydrothermal circulation. Impact-generated hydrothermal systems have been documented from several impact structures world-wide. Three Australian examples—Shoemaker, Woodleigh and Yarrabubba—provide evidence of hydrothermal fluid flow both within and around the structures. Field observations, and petrographic and geochemical data suggest a common evolutionary trend of post-impact hydrothermal activity from early high-temperature alkali metasomatism to a later lower temperature H+ metasomatism, resulting in the overprinting by hydrous mineral assemblages. Hydrothermal systems activated by meteorite-impact events are important because they may also form economic mineral deposits, as is documented for several impact structures in the world. A working model of hydrothermal circulation in terrestrial impact structures posits two main stages: (i) initial high-temperature fluids percolate downward causing widespread alkali metasomatism of the shattered target rocks below the melt sheet, resulting in their modification to rocks of syenitic affinity; and (ii) inflow of meteoric water and progressive cooling of the melt sheet leads to a lower temperature stage, in which hydrothermal fluid flow tends to move upward, resulting in mineral assemblages and alteration patterns that resemble those of epithermal systems. In addition, these fluids can discharge at the surface as hot springs.

Description: A reddish-brown bacterium was isolated from photoheterotrophic enrichments of mangrove soil from the western coast of India, in a medium that contained 10 % (w/v) NaCl. Phylogenetic analysis on the basis of 16S rRNA gene sequences showed that strain JA100T clusters with species of the genus Marichromatium of the class ‘Gammaproteobacteria’. Cells of strain JA100T are Gram-negative, motile rods with monopolar single flagella; they require NaCl, the optimum concentration being 1–4 %, and tolerate concentrations up to 13 %. The strain has vesicular internal membrane structures, bacteriochlorophyll a and, most probably, carotenoids of the spirilloxanthin series. No growth factors are required. A reduced sulfur source is required for growth, and, during growth on reduced sulfur sources as electron donors, sulfur is intermediately deposited as a single large granule within the cell. Strain JA100T could not grow at the expense of other tricarboxylic acid cycle intermediates, except malate. On the basis of 16S rRNA gene sequence analysis and its morphological and physiological characteristics, strain JA100T is sufficiently different from other Marichromatium species to justify its designation as a novel species, for which the name Marichromatium indicum sp. nov. is proposed. The type strain is JA100T (=DSM 15907T=ATCC BAA-741T=JCM 12653T).

Description: From September to October 2002, shallow drilling, using the submersible (5 m) Rockdrill of the British Geological Survey and the German R/V Sonne revealed critical information on the subsurface nature of two distinct hydrothermal systems in the New Ireland fore-arc and the Manus Basin of Papua New Guinea. Drilling at Conical Seamount significantly extends the known surface extent of the previously discovered vein-style gold mineralization (up to 230 g/t Au) at this site. Drilling the conventional PACMANUS volcanic-hosted massive sulfide deposit recovered complexly textured massive sulfide with spectacular concentrations of gold in several core sections including 0.5 m @ 28 g/t Au, 0.35 m @ 30 g/t Au, and 0.20 m @ 57 g/t Au. Shallow drilling is a fast and cost efficient method that bridges the gap between surface sampling and deep (ODP) drilling and will become a standard practice in the future study of seafloor hydrothermal systems and massive sulfide deposits.

Description: Improved monitoring of non-CO2 greenhouse gases in air samples is presented, achieved using a new analytical system based on preconcentration, gas-chromatography and mass spectrometry. In addition to the major HFCs, HCFCs and CFCs, the new observations include the first in situ time series of the C1–C3 PFCs (CF4, C2F6 and C3F8) and the more volatile of the HFCs (CHF3, CH2F2, CH3CF3) alongside SF6, all of which are now monitored routinely as part of the Advanced Global Atmospheric Gases Experiment (AGAGE). Observed trends in newly monitored species are shown, obtained from 1–2 years continuous in situ air analyses at remote monitoring sites at Mace Head (Ireland) and Cape Grim (Australia). Observed deviations in the air background for these gas species are linked to modelled trajectories of air masses arriving at the monitoring stations to indicate potential source regions for emissions in Europe and Australia. In addition, preliminary estimates of 2004 mixing ratio growth rates of compounds are deduced from the observations, which highlight the importance of continuous atmospheric monitoring for verification of consumption-based emission estimates of non-CO2 greenhouse gases.

Description: Physiological studies have shown that the epidermal head and arm lines in cephalopods are a mechanoreceptive system that is similar to the fish and amphibian lateral lines (. A lateral line analogue in cephalopods: Water waves generate microphonic potentials in the epidermal head lines of Sepia officinalis and Lolliguncula brevis. J. Comp. Physiol. A 164:1–5.); however, the biological significance of the epidermal lines remains unclear. To test whether cuttlefish show behavioural responses to local water movements, juvenile Sepia officinalis were exposed to local sinusoidal water movements of different frequencies (0.01–1000 Hz) produced by a vibrating sphere. Five behavioural responses were recorded: body pattern changing, moving, burrowing, orienting, and swimming. Cuttlefish responded to a wide range of frequencies (20–600 Hz), but not to all of the frequencies tested within that range. No habituation to repeated stimuli was seen. Results indicate that cuttlefish can detect local water movements (most likely with the epidermal head and arm lines) and are able to integrate that information into behavioural responses.

Description: Precipitation and evaporation budgets over the Baltic Sea were studied in a concerted project called PEP in BALTEX (Pilot study of Evaporation and Precipitation in the Baltic Sea), combining extensive field measurements and modelling efforts. Eddy-correlation-measurements of turbulent heat flux were made on a semi-continuous basis for a 12 month period at four well-exposed coastal sites in the Baltic Proper (the main basin of the Baltic Sea). Precipitation was measured at land-based sites with standard gauges and on four merchant ships travelling between Germany and Finland with the aid of specially designed ship rain gauges (SRGs). The evaporation and precipitation regime of the Baltic Sea was modelled for a 12 month period by applying a wide range of numerical models: the operational atmospheric High Resolution Limited Area Model (HIRLAM, Swedish and Finnish versions), the German atmospheric REgional-scale MOdel, REMO, the operational German Europe Model (only precipitation), the oceanographic model PROBE-Baltic, and two models that use interpolation of ground-based data, the Swedish MESAN model of SMHI and a German model of IFM-GEOMAR Kiel. Modelled precipitation was compared with SRG measurements on board the ships. A reasonable correlation was obtained, but the regional-scale models and MESAN gave some 20% higher precipitation over the sea than is measured. Bulk parameterisation schemes for evaporation were evaluated against measurements. A constant value of C HN and C EN with wind speed, underestimated large fluxes of both sensible and latent heat flux. The limited area models do not resolve the influence of the height of the marine boundary layer in coastal zones and the entrainment (on the surface fluxes), which may explain the observed low correlations between modelled and measured latent heat fluxes. Estimates of evaporation, E, and precipitation, P, for the entire Baltic Proper were made with several models for a 12 month period. While the annual variation was well represented by all predictions, there are still important differences in the annual means. Evaporation ranges from 509 to 625 mm year−1 and precipitation between 624 and 805 mm year−1 for this particular 12 month period. Taking the results of model verification from the present study into account, the best estimate of P–E is about 100 ± 50 mm for this particular 12 month period. But the annual mean of P–E varies considerably from year to year. This is reflected in simulations with the PROBE-Baltic model for an 18 year period, which gave 95 mm year−1 for the 12 month period studied here and 32 mm year−1 as an average for 18 years.

Description: Description of 64 species of fresh‐water Fishes of the suborder Characoidei (Cypriniformes), collected by Dr. K. H. Lüling during his 1959/60 Expedition in lower Ucayali and Iquitos regions. New forms for science (about 10 per cent of the collected species) are: a new genus, Oxybrycon, which seems to be close to Leptobrycon and Macropsobrycon; a Hemigrammus‐species and 2 Hyphessobrycon‐species; a Cheirodon (the genus was not signaled from Peruvian Amazon); and a Serrasalmus. Besides, 10 species seem to be new for the concerned territory, whereas 2 other forms have been described in former papers (see References). Some identification‐Keys are given, concerning Amazonian Triportheus and Schizodon, as well as concerning one Curimatus‐group of species. Finally a list of the characoid Fishes, known to occur in the Iquitos surroundings and in the lower Ucayali, is given.

Description: Sixty-six species of cephalopods are listed from South Africa from the area bounded on the east by Delagoa Bay and on the west by Luderitz Bay. Four new species are described and illustrated: Idiosepius biserialis, Idiosepius macrocheir, Inioteuthis capensis and Eledone thysanophora. In addition some of the species of cephalopods described by Robson from South Africa are redescribed or evaluated based on re-examination of the types in the British Museum. The history of cephalopod studies in South Africa is reviewed and all pertinent literature is cited.