ALBERT

Description: Cold-water coral (CWC) reefs constitute one of the most complex deep-sea habitats harboring a vast diversity of associated species. Like other tropical or temperate framework builders, these systems are facing an uncertain future due to several threats, such as global warming and ocean acidification. In the case of Mediterranean CWC communities, the effect may be exacerbated due to the greater capacity of these waters to absorb atmospheric CO2 compared to the global ocean. Calcification in these organisms is an energy-demanding process, and it is expected that energy requirements will be greater as seawater pH and the availability of carbonate ions decrease. Therefore, studies assessing the effect of a pH decrease in skeletal growth, and metabolic balance are critical to fully understand the potential responses of these organisms under a changing scenario. In this context, the present work aims to investigate the medium- to long-term effect of a low pH scenario on calcification and the biochemical composition of two CWCs from the Mediterranean, Dendrophyllia cornigera and Desmophyllum dianthus. After 314 d of exposure to acidified conditions, a significant decrease of 70 % was observed in Desmophyllum dianthus skeletal growth rate, while Dendrophyllia cornigera showed no differences between treatments. Instead, only subtle differences between treatments were observed in the organic matter amount, lipid content, skeletal microdensity, or porosity in both species, although due to the high variability of the results, these differences were not statistically significant. Our results also confirmed a heterogeneous effect of low pH on the skeletal growth rate of the organisms depending on their initial weight, suggesting that those specimens with high calcification rates may be the most susceptible to the negative effects of acidification.

Description: The Atlantic meridional overturning circulation (AMOC) carries large amounts of heat into the North Atlantic influencing climate regionally as well as globally. Palaeo-records and simulations with comprehensive climate models suggest that the positive salt-advection feedback may yield a threshold behaviour of the system. That is to say that beyond a certain amount of freshwater flux into the North Atlantic, no meridional overturning circulation can be sustained. Concepts of monitoring the AMOC and identifying its vicinity to the threshold rely on the fact that the volume flux defining the AMOC will be reduced when approaching the threshold. Here we advance conceptual models that have been used in a paradigmatic way to understand the AMOC, by introducing a density-dependent parameterization for the Southern Ocean eddies. This additional degree of freedom uncovers a mechanism by which the AMOC can increase with additional freshwater flux into the North Atlantic, before it reaches the threshold and collapses: an AMOC that is mainly wind-driven will have a constant upwelling as long as the Southern Ocean winds do not change significantly. The downward transport of tracers occurs either in the northern sinking regions or through Southern Ocean eddies. If freshwater is transported, either atmospherically or via horizontal gyres, from the low to high latitudes, this would reduce the eddy transport and by continuity increase the northern sinking which defines the AMOC until a threshold is reached at which the AMOC cannot be sustained. If dominant in the real ocean this mechanism would have significant consequences for monitoring the AMOC.

Description: Marine habitats worldwide are increasingly pressurized by climate change, especially along the Antarctic Peninsula. Well-studied areas in front of rapidly retreating tidewater glaciers like Potter Cove are representative for similar coastal environments and, therefore, shed light on habitat formation and development on not only a local but also regional scale. The objective of this study was to provide insights into habitat distribution in Potter Cove, King George Island, Antarctica, and to evaluate the associated environmental processes. Furthermore, an assessment concerning the future development of the habitats is provided. To describe the seafloor habitats in Potter Cove, an acoustic seabed discrimination system (RoxAnn) was used in combination with underwater video images and sediment samples. Due to the absence of wave and current measurements in the study area, bed shear stress estimates served to delineate zones prone to sediment erosion. On the basis of the investigations, two habitat classes were identified in Potter Cove, namely soft-sediment and stone habitats that, besides influences from sediment supply and coastal morphology, are controlled by sediment erosion. A future expansion of the stone habitat is predicted if recent environmental change trends continue. Possible implications for the Potter Cove environment, and other coastal ecosystems under similar pressure, include changes in biomass and species composition.

Description: In this study we present a comparative quantification of CaCO3 production rates by rhodolith-forming coralline red algal communities situated in high polar latitudes and assess which environmental parameters control these production rates. The present rhodoliths act as ecosystem engineers, and their carbonate skeletons provide an important ecological niche to a variety of benthic organisms. The settings are distributed along the coasts of the Svalbard archipelago, being Floskjeret (78◦180N) in Isfjorden, Krossfjorden (79◦080N) at the eastern coast of Haakon VII Land, Mosselbukta (79◦530N) at the eastern coast of Mosselhalvøya, and Nordkappbukta (80◦310N) at the northern coast of Nordaustlandet. All sites feature Arctic climate and strong seasonality.

Description: The family Rhodobacteraceae can be considered a paradigm of modern taxonomy of prokaryotes. Taking into account the number of species and genera that conforms the family, together with the knowledge about their abundance and vast global distribution, it surprises that most of them have been described relatively recent to our days. Two notable exceptions are Rhodonostoc capsulatum (Molisch, Die purpurbakterien nach neuen untersuchungen, vols i–vii. G. Fischer, Jena, pp 1–95, 1907) and Micrococcus denitrificans Beijerinck and Minkman (Zentbl Bakteriol, Parasitenkd, Infektionskr Hyg. Abt II 25:30–63, 1910), early basonyms of Rhodobacter capsulatus and Paracoccus denitrificans, respectively. The fact that so many descriptions within this family are recent means that some studies have been concomitant and pose a challenge not only for pure taxonomic studies but also for interpreting other studies in which a rapidly evolving nomenclature had to be used anyway. The metabolic and ecological diversity of the group adds further complexity. In spite of all these difficulties, the picture is far from being a chaos and it can be considered an exciting and important bacterial group to study. Rhodobacteraceae are, fundamentally, aquatic bacteria that frequently thrive in marine environments. They comprise mainly aerobic photo- and chemoheterotrophs but also purple non-sulfur bacteria which perform photosynthesis in anaerobic environments. They are deeply involved in sulfur and carbon biogeochemical cycling and symbiosis with aquatic micro- and macroorganisms. One hundred genera are currently recognized as members of the family although the Stappia group, Ahrensia, Agaricicola, and Rhodothalassium do not belong, phylogenetically, to the family. The 90 other genera are distributed in 5 phylogenetic groups (the Rhodobacter, the Paracoccus, the Rhodovulum, the Amaricoccus, and the Roseobacter clades) that might be considered a family on its own.

Description: Bacterial light production involves enzymes-luciferase, fatty acid reductase, and flavin reductase-and substrates-reduced flavin mononucleotide and long-chain fatty aldehyde-that are specific to bioluminescence in bacteria. The bacterial genes coding for these enzymes, luxA and luxB for the subunits of luciferase; luxC, luxD, and luxE for the components of the fatty acid reductase; and luxG for flavin reductase, are found as an operon in light-emitting bacteria, with the gene order, luxCDABEG. Over 30 species of marine and terrestrial bacteria, which cluster phylogenetically in Aliivibrio, Photobacterium, and Vibrio (Vibrionaceae), Shewanella (Shewanellaceae), and Photorhabdus (Enterobacteriaceae), carry lux operon genes. The luminescence operons of some of these bacteria also contain genes involved in the synthesis of riboflavin, ribEBHA, and in some species, regulatory genes luxI and luxR are associated with the lux operon. In well-studied cases, lux genes are coordinately expressed in a population density-responsive, self-inducing manner called quorum sensing. The evolutionary origins and physiological function of bioluminescence in bacteria are not well understood but are thought to relate to utilization of oxygen as a substrate in the luminescence reaction.

Description: Fertilization depends on distribution and aggregation patterns of sea urchins which influence gamete contact time and may potentially enhance their vulnerability to ocean acidification. In this study, we conducted fertilization experiments to assess the effects of selected pH scenarios on fertilization success of Strongylocentrotus droebachiensis, from Spitsbergen, Arctic. Acidification was achieved by aerating seawater with different CO2 partial pressures to represent pre-industrial and present conditions (measured ~180–425 µatm) and future acidification scenarios (~550–800, ~1,300, ~2,000 µatm). Fertilization success was defined as the proportion of successful/unsuccessful fertilizations per treatment; eggs were classified according to features of their fertilization envelope (FE), hyaline layer (HL) and achievement of cellular division. The diagnostic findings of specific pathological aberrations were described in detail. We additionally measured intracellular pH changes in unfertilized eggs exposed for 1 h to selected acidification treatments using BCECF/AM. We conclude that (a) acidified conditions increase the proportion of eggs that failed fertilization, (b) acidification may increase the risk of polyspermy due to failures in the FE formation supported by the occasional observation of multiple sperms in the perivitelline space and (c) irregular formation of the embryo may arise due to impaired formation of the HL. The decrease in fertilization success could be also related to the observed changes in intracellular pH at pCO2 ~ 1,000 μatm or higher.

Description: The 5th International Workshop on Modeling the Ocean (IWMO http://www.uib.no/en/IWMO2013/-58927/iwmo-2013-bergen-norway) was held in June 17–20, in Bergen, Norway. The historic city of Bergen is the gateway to the fjords and a center for oceanic research. The workshop was hosted by the University of Bergen and also sponsored by the Research Council of Norway. Approximately 80 researchers worldwide participated in the workshop. Professor Mellor, Princeton University, gave the keynote lecture. The 5th IWMO meeting in Bergen was the first IWMO held in Europe, followed on the footsteps of previous meetings, IWMO-2009 in Taipei, Taiwan (Oey et al. 2010a, b), IWMO-2010 in Norfolk, USA (Ezer et al. 2011), IWMO-2011 in Qingdao, China (Oey et al. 2013a), and IWMO-2012 in Yokohama, Japan (Oey et al. 2013b). The participants presented approximately 60 oral talks and 20 posters, covering a wide range of ocean modeling and data analysis topics, as described below. In the spirit of promoting young s ...

Description: Linking lower and higher trophic levels requires special focus on the essential role played by mid-trophic levels, i.e., the zooplankton. One of the most relevant pieces of information regarding zooplankton in terms of flux of energy lies in its size structure. In this study, an extensive data set of size measurements is presented, covering parts of the western European continental shelf and slope, from the Galician coast to the Ushant front, during the springs from 2005 to 2012. Zooplankton size spectra were estimated using measurements carried out in situ with the Laser Optical Plankton Counter (LOPC) and with an image analysis of WP2 net samples (200 μm mesh size) performed following the ZooScan methodology. The LOPC counts and sizes particles within 100–2000 μm of spherical equivalent diameter (ESD), whereas the WP2/ZooScan allows for counting, sizing and identification of zooplankton from ~ 400 μm ESD. The difference between the LOPC (all particles) and the WP2/ZooScan (zooplankton only) was assumed to provide the size distribution of non-living particles, whose descriptors were related to a set of explanatory variables (including physical, biological and geographic descriptors). A statistical correction based on these explanatory variables was further applied to the LOPC size distribution in order to remove the non-living particles part, and therefore estimate the size distribution of zooplankton. This extensive data set provides relevant information about the zooplankton size distribution variability, productivity and trophic transfer efficiency in the pelagic ecosystem of the Bay of Biscay at a regional and interannual scale.

Description: The Adula Nappe in the Central Alps is a mixture of various pre-Mesozoic continental basement rocks, metabasics, ultrabasics, and Mesozoic cover rocks, which were pervasively deformed during Alpine orogeny. Metabasics, ultrabasics, and locally garnet–mica schists preserve eclogite-facies assemblages while the bulk of the nappe lacks such evidence. We provide garnet major-element data, Lu profiles, and Lu–Hf garnet geochronology from eclogites sampled along a north–south traverse. A southward increasing Alpine overprint over pre-Alpine garnets is observed throughout the nappe. Garnets in a sample from the northern Adula Nappe display a single growth cycle and yield a Variscan age of 323.8 ± 6.9 Ma. In contrast, a sample from Alpe Arami in the southernmost part contains unzoned garnets that fully equilibrated to Alpine high-pressure (HP) metamorphic conditions with temperatures exceeding 800 °C. We suggest that the respective Eocene Lu–Hf age of 34.1 ± 2.8 Ma is affected by partial re-equilibration after the Alpine pressure peak. A third sample from the central part of the nappe contains separable Alpine and Variscan garnet populations. The Alpine population yields a maximum age of 38.8 ± 4.3 Ma in line with a previously published garnet maximum age from the central nappe of 37.1 ± 0.9 Ma. The Adula Nappe represents a coherent basement unit, which preserves a continuous Alpine high-pressure metamorphic gradient. It was subducted as a whole in a single, short-lived event in the upper Eocene. Controversial HP ages and conditions in the Adula Nappe may result from partly preserved Variscan assemblages in Alpine metamorphic rocks.

Description: Ecosystems and their biodiversity have to be protected and preserved as sources of services and goods. The human population controls and modifies ecosystems to improve its health conditions and welfare. The consequences of human activities should be carefully monitored and ecosystems should be managed to protect all of the species and preserve their functioning. The development of strategies for ecosystem management benefits from the use of computational techniques to model the dynamics of species that interact with their abiotic and biotic environment. Life scientists and computer scientists need to work together to define and analyse ecosystem models. However, there is a multifaceted gap between the approaches used in life science and those used in computer science. Such gap is both cultural and technical, and results in a number of challenges. In this paper we identify these challenges and provide technical and cultural proposals for solving them.

Description: Knowledge of calcium phosphate (Ca-P) solubility is crucial for understanding temporal and spatial variations of phosphorus (P) concentrations in water bodies and sedimentary reservoirs. In situ relationships between liquid-and solid-phase levels cannot be fully explained by dissolved analytes alone and need to be verified by determining particular sediment P species. Lack of quantification methods for these species limits the knowledge of the P cycle. To address this issue, we (i) optimized a specifically developed conversion-extraction (CONVEX) method for P species quantification using standard additions, and (ii) simultaneously determined solubilities of Ca-P standards by measuring their pH-dependent contents in the sediment matrix. Ca-P minerals including various carbonate fluorapatite (CFAP) specimens from different localities, fluorapatite (FAP), fish bone apatite, synthetic hydroxylapatite (HAP) and octacalcium phosphate (OCP) were characterized by XRD, Raman, FTIR and elemental analysis. Sediment samples were incubated with and without these reference minerals and then sequentially extracted to quantify Ca-P species by their differential dissolution at pH values between 3 and 8. The quantification of solid-phase phosphates at varying pH revealed solubilities in the following order: OCP〉 HAP〉 CFAP (4.5% CO3)〉 CFAP (3.4% CO3)〉 CFAP (2.2% CO3)〉 FAP. Thus, CFAP was less soluble in sediment than HAP, and CFAP solubility increased with carbonate content. Unspiked sediment analyses together with standard addition analyses indicated consistent differential dissolution of natural sediment species vs. added reference species and therefore verified the applicability of the CONVEX method in separately determining the most prevalent Ca-P minerals. We found surprisingly high OCP contents in the coastal sediments analyzed, which supports the hypothesis of apatite formation by an OCP precursor mechanism.

Description: Dedicated to the memory of our colleague Klaus Hochheim, who tragically lost his life in the Arctic expedition in September 2013. A distinct, subsurface density front along the eastern St. Anna Trough in the northern Kara Sea is inferred from hydrographic observations in 1996 and 2008–2010. Direct velocity measurements show a persistent northward subsurface current (~ 18 cm s−1) along the St. Anna Trough eastern flank. This sheared flow, carrying the outflow from the Barents and Kara seas to the Arctic Ocean, is also evident from shipboard observations as well as from geostrophic velocities and numerical model simulations. Although we cannot substantiate our conclusions by direct observation-based estimates of mixing rates in the area, we hypothesize that the enhanced vertical mixing along the St. Anna Trough eastern flank favors the upward heat loss from the intermediate warm Atlantic water layer. Modeling results support this hypothesis. The upward heat flux inferred from hydrographic data and model simulations is of O(30–100) W m−2. The region of lowered sea ice thickness and concentration seen both in sea ice remote sensing observations and model simulations marks the Atlantic water pathway in the St. Anna Trough and adjacent Nansen Basin continental margin. In fact, the sea ice shows a delayed freeze-up onset during fall and a reduction in the sea ice thickness during winter. This is consistent with our results on the enhanced Atlantic water heat loss along the Atlantic water pathway in the St. Anna Trough.

Description: Following the launch of ESA's Soil Moisture and Ocean Salinity (SMOS) mission, it has been shown that brightness temperatures at a low microwave frequency of 1.4 GHz (L-band) are sensitive to sea ice properties. In the first demonstration study, sea ice thickness up to 50 cm has been derived using a semi-empirical algorithm with constant tie-points. Here, we introduce a novel iterative retrieval algorithm that is based on a thermodynamic sea ice model and a three-layer radiative transfer model, which explicitly takes variations of ice temperature and ice salinity into account. In addition, ice thickness variations within the SMOS spatial resolution are considered through a statistical thickness distribution function derived from high-resolution ice thickness measurements from NASA's Operation IceBridge campaign. This new algorithm has been used for the continuous operational production of a SMOS-based sea ice thickness data set from 2010 on. The data set is compared to and validated with estimates from assimilation systems, remote sensing data, and airborne electromagnetic sounding data. The comparisons show that the new retrieval algorithm has a considerably better agreement with the validation data and delivers a more realistic Arctic-wide ice thickness distribution than the algorithm used in the previous study (Kaleschke et al., 2012).

Description: Subfossil Cladocera were sampled and examined from the surface sediments of 35 thermokarst lakes along a temperature gradient crossing the tree line in the Anabar-river basin in northwestern Yakutia, northeastern Siberia. The lakes were distributed through three environmental zones: typical tundra, southern tundra and forest tundra. All lakes were situated within the continuous permafrost zone. Our investigation showed that the cladoceran communities in the lakes of the Anabar region are diverse and abundant, as reflected by taxonomic richness, and high diversity and evenness indices (H = 1.89 ± 0.51; I = 0.8 ± 0.18). CONISS cluster analysis indicated that the cladoceran communities in the three ecological zones (typical tundra, southern tundra and forest-tundra) differed in their taxonomic composition and structure. Differences in the cladoceran assemblages were related to limnological features and geographical position, vegetation type, climate and water chemistry. The constrained redundancy analysis indicated that TJuly, water depth and both sulphate (SO4 2−) and silica (Si4+) concentrations significantly (p ≤ 0.05) explained variance in the cladoceran assemblage. TJuly featured the highest percentage (17.4 %) of explained variance in the distribution of subfossil Cladocera. One of the most significant changes in the structure of the cladoceran communities in the investigated transect was the replacement of closely related species along the latitudinal and vegetation gradient. The results demonstrate the potential for a regional cladoceran-based temperature model for the Arctic regions of Russia, and for and Yakutia in particular.

Description: A large monothalamous foraminiferan, Toxisarcon taimyr sp. nov., has been isolated from the benthic samples from the Kara Sea inner shelf near the mouth of Yenisey river estuary, at a depth of 50–100 m. In its overall morphology, the new species closely resembles T. synsuicidica, one of the two species of Toxisarcon described to date. It possesses a large irregularly shaped cell body, covered by a thin layer of a fibrous organic coating. Numerous reticulopodia typically extend from all over the cell surface; the species is very motile and rapidly changes cell shape. Long and thick reticulopodial bundles form in the direction of movement. In the phylogenetic tree based on partial small-subunit ribosomal DNA (SSU rDNA) sequences, T. taimyr branches together with the two other known species of Toxisarcon within the clade C of monothalamous foraminifera.

Description: The first long-term aerosol sampling and chemical characterization results from measurements at the Cape Verde Atmospheric Observatory (CVAO) on the island of São Vicente are presented and are discussed with respect to air mass origin and seasonal trends. In total 671 samples were collected using a high-volume PM10 sampler on quartz fiber filters from January 2007 to December 2011. The samples were analyzed for their aerosol chemical composition, including their ionic and organic constituents. Back trajectory analyses showed that the aerosol at CVAO was strongly influenced by emissions from Europe and Africa, with the latter often responsible for high mineral dust loading. Sea salt and mineral dust dominated the aerosol mass and made up in total about 80% of the aerosol mass. The 5-year PM10 mean was 47.1 ± 55.5 μg m−2, while the mineral dust and sea salt means were 27.9 ± 48.7 and 11.1 ± 5.5 μg m−2, respectively. Non-sea-salt (nss) sulfate made up 62% of the total sulfate and originated from both long-range transport from Africa or Europe and marine sources. Strong seasonal variation was observed for the aerosol components. While nitrate showed no clear seasonal variation with an annual mean of 1.1 ± 0.6 μg m−3, the aerosol mass, OC (organic carbon) and EC (elemental carbon), showed strong winter maxima due to strong influence of African air mass inflow. Additionally during summer, elevated concentrations of OM were observed originating from marine emissions. A summer maximum was observed for non-sea-salt sulfate and was connected to periods when air mass inflow was predominantly of marine origin, indicating that marine biogenic emissions were a significant source. Ammonium showed a distinct maximum in spring and coincided with ocean surface water chlorophyll a concentrations. Good correlations were also observed between nss-sulfate and oxalate during the summer and winter seasons, indicating a likely photochemical in-cloud processing of the marine and anthropogenic precursors of these species. High temporal variability was observed in both chloride and bromide depletion, differing significantly within the seasons, air mass history and Saharan dust concentration. Chloride (bromide) depletion varied from 8.8 ± 8.5% (62 ± 42%) in Saharan-dust-dominated air mass to 30 \textpm 12% (87 ± 11%) in polluted Europe air masses. During summer, bromide depletion often reached 100% in marine as well as in polluted continental samples. In addition to the influence of the aerosol acidic components, photochemistry was one of the main drivers of halogenide depletion during the summer; while during dust events, displacement reaction with nitric acid was found to be the dominant mechanism. Positive matrix factorization (PMF) analysis identified three major aerosol sources: sea salt, aged sea salt and long-range transport. The ionic budget was dominated by the first two of these factors, while the long-range transport factor could only account for about 14% of the total observed ionic mass.

Description: Submarine slope failures of various types and sizes are common along the tectonic and seismically active Ligurian margin, northwestern Mediterranean Sea, primarily because of seismicity up to ~M6, rapid sediment deposition in the Var fluvial system, and steepness of the continental slope (average 11°). We present geophysical, sedimentological and geotechnical results of two distinct slides in water depth 〉1,500 m: one located on the flank of the Upper Var Valley called Western Slide (WS), another located at the base of continental slope called Eastern Slide (ES). WS is a superficial slide characterized by a slope angle of ~4.6° and shallow scar (~30 m) whereas ES is a deep-seated slide with a lower slope angle (~3°) and deep scar (~100 m). Both areas mainly comprise clayey silt with intermediate plasticity, low water content (30–75 %) and underconsolidation to strong overconsolidation. Upslope undeformed sediments have low undrained shear strength (0–20 kPa) increasing gradually with depth, whereas an abrupt increase in strength up to 200 kPa occurs at a depth of ~3.6 m in the headwall of WS and ~1.0 m in the headwall of ES. These boundaries are interpreted as earlier failure planes that have been covered by hemipelagite or talus from upslope after landslide emplacement. Infinite slope stability analyses indicate both sites are stable under static conditions; however, slope failure may occur in undrained earthquake condition. Peak earthquake acceleration from 0.09 g on WS and 0.12 g on ES, i.e. M5–5.3 earthquakes on the spot, would be required to induce slope instability. Different failure styles include rapid sedimentation on steep canyon flanks with undercutting causing superficial slides in the west and an earthquake on the adjacent Marcel fault to trigger a deep-seated slide in the east.

Description: An earth system model of intermediate complexity (CLIMate and BiosphERe – CLIMBER-2) and a land surface model (JSBACH), which dynamically represent vegetation, are used to simulate natural fire dynamics through the last 8000 yr. Output variables of the fire model (burned area and fire carbon emissions) are used to compare model results with sediment-based charcoal reconstructions. Several approaches for processing model output are also tested. Charcoal data are reported in Z-scores with a base period of 8000–200 BP in order to exclude the strong anthropogenic forcing of fire during the last two centuries. The model–data comparison reveals a robust correspondence in fire activity for most regions considered, while for a few regions, such as Europe, simulated and observed fire histories show different trends. The difference between modelled and observed fire activity may be due to the absence of anthropogenic forcing (e.g. human ignitions and suppression) in the model simulations, and also due to limitations inherent to modelling fire dynamics. The use of spatial averaging (or Z-score processing) of model output did not change the directions of the trends. However, Z-score-transformed model output resulted in higher rank correlations with the charcoal Z-scores in most regions. Therefore, while both metrics are useful, processing model output as Z-scores is preferable to areal averaging when comparing model results to transformed charcoal records.

Description: This Encyclopedia comprises the current knowledge in marine geosciences whereby not only basic but also applied and technical sciences are covered. Through this concept a broad scale of users in the field of marine sciences and techniques is addressed, from students and scholars in academia to engineers and decision makers in industry and politics. Globally growing demand of energy and mineral resources, reliable future projection of climate processes and the protection of coasts to mitigate the threats of disasters and hazards require a comprehensive understanding of the structure, ongoing processes and genesis of the marine geosphere. Beyond the “classical” research fields in marine geology in current time more general concepts have been evolved integrating marine geophysics, hydrography, marine biology, climatology and ecology. As an umbrella the term “marine geosciences” has been broadly accepted for this new complex field of research and the solutions of practical tasks in the marine realm.

Description: Oceanic eddies having scales from several hundred meters to several hundred kilometers are ubiquitous phenomena in the World’s ocean. This became evident only after they could be observed from satellites and space shuttles. Here we present several images taken in different spectral bands which show signatures of eddies of different spatial scales in sea areas around Africa. In particular, we present a series of satellite images showing the propagation of a small-scale cyclonic (cold) eddy generated at Cap-Vert at the coast of Senegal into the open ocean. We show that this small-scale eddy transported nutrients from the Senegal upwelling region westward into the oligotrophic North Atlantic thus giving rise to enhanced chlorophyll-a concentration there. Since eddies are also areas of high fish population, knowledge of their position and properties is of great importance for fishery.

Description: Satellite observations of microwave brightness temperatures between 19 GHz and 85 GHz are the main data sources for operational sea-ice monitoring and retrieval of ice concentrations. However, microwave brightness temperatures depend on the emissivity of snow and ice, which is subject to pronounced seasonal variations and shows significant hemispheric contrasts. These mainly arise from differences in the rate and strength of snow metamorphism and melt. We here use the thermodynamic snow model SNTHERM forced by European Re-Analysis (ERA) interim data and the Microwave Emission Model of Layered Snowpacks (MEMLS), to calculate the sea-ice surface emissivity and to identify the contribution of regional patterns in atmospheric conditions to its variability in the Arctic and Antarctic. The computed emissivities reveal a pronounced seasonal cycle with large regional variability. The emissivity variability increases from winter to early summer and is more pronounced in the Antarctic. In the pre-melt period (January–May, July–November) the standard deviations in surface microwave emissivity due to diurnal, regional and inter-annual variability of atmospheric forcing reach up to Δε = 0.034, 0.043, and 0.097 for 19 GHz, 37 GHz and 85 GHz channels, respectively. Between 2000 and 2009, small but significant positive emissivity trends were observed in the Weddell Sea during November and December as well as in Fram Strait during February, potentially related to earlier melt onset in these regions. The obtained results contribute to a better understanding of the uncertainty and variability of sea-ice concentration and snow-depth retrievals in regions of high sea-ice concentrations.

Description: The main migrations of the Polar front (PF) during the last 300 ka were identified using planktic foraminiferal census data and derived from them sea surface paleotemperature (SST) estimates in two synchronized AMK-4438 and M23414 cores recovered directly beneath the main stream of the North Atlantic Current (NAC) south of Iceland. During the summer seasons, the cold waters adjacent to the PF did not reach the studied sites. These waters occurred here only during the winter seasons of MIS 2, 6, and 8. The northern part of the study area was influenced by the arctic waters more often than its southern part. During MIS 8 and 6 isotherms in the North Atlantic had mainly the subzonal orientation, while during MIS 2-4 they had the submeridional orientation. During the interglacials, the PF was located northward and westward from the study area. During MIS 7, the front was presumably situated closer to the study area in comparison with its modern position, and the isotherms were oriented mainly subzonal. For the MIS 5e period, we observed the most distant retreat of PF from the investigated area in the western and northwestern direction in relation to the anomalous deflection of the NAC to the north-west (intensification of the Irminger current) and the predominance of the submeridional orientation of the isotherms in the study area. During MIS 1, as well as MIS 7, the isotherms in the study area had mainly the subzonal orientation.

Description: Three bottom sediment cores (140–190 cm long) taken from Isfjorden, West Spitsbergen, were analysed for pollen and spores with the main aim of elucidating the local pattern of pollen and spore succession in order to establish age control and define the stratigraphy of marine sediments. Isfjorden bottom sediments consist of greyish-green silty pelite with gruss, detritus, and pebble inclusions. The upper 25 cm are water-saturated and nonplastic. In spite of extremely low concentrations, and the predominance of reworked pre-Quaternary microfossils, the marine pollen spectra appear quite similar to those known from radiocarbon-dated lake sediments and peat exposures on the coasts of neighbouring Billefjorden, Van Mijenfjorden, and Hornsundfjorden, provided that long-distance transported pollen of conifers, tree birches, and spores of ferns are eliminated from marine pollen spectra compositions. The correlation of pollen zones (PZ) established in fjord sediments with those known from peat and lake sections enables the pollen-based stratigraphy of Isfjorden bottom sediments to be established and further reconstruction to be made of the major stages of the late Holocene terrestrial vegetation history of West Spitsbergen. The oldest pollen records date back to about 2.8–3 ka. They characterize the lowermost silty pelite layer (intervals 180–150 cm in core 11 and 190–60 cm in core 14 from the southwestern part of the fjord). At this time, moss–cereal–sedge fens and heather bogs in the coastal areas coexisted with rocky tundra vegetation at higher elevations. A marked increase in the content of Salix sp., Betula sect. Nanae-type, and Ericales pollen is recorded in the upper part of the pelite layer in cores 11 and 14. Similar spectra dominate core 9 from the northeastern inner part of the fjord. The percentage of green moss spores is extremely low. This type of spectra is suggestive of a warmer-than-present climate in West Spitsbergen. The upper water-saturated layer of all three cores contains pollen assemblages that are very similar to those identified in the Isfjorden surface sediment samples. Therefore, they have been likely accumulated during the last 2000 years. These uppermost pollen assemblages show a sharp increase in sedge pollen. This suggests the expansion of coastal fens, which can be attributed to an increase in the amount of precipitation. Extremely low pollen concentrations in Isfjorden bottom sediments possibly reflect very high accumulation rates during the time of silty pelite layer sedimentation.

Description: Lake Mogilnoe (Kildin Island, the Barents Sea) is a marine stratified lake, a refuge for landlocked populations of marine organisms. Unlike other known marine lakes from polar areas, which communicate with the sea by water percolation at the surface, Mogilnoe has a subterranean connection with the sea like tropical and subtropical anchialine lakes. Similarly to some other marine lakes, Mogilnoe has traditionally been considered to be biologically isolated from the sea and subject to little change. We review the current status of the physical features, zooplankton and benthos of Mogilnoe and trace changes that have occurred in the lake since the start of observations in 1894. The anaerobic bottom water layer has expanded by 100 %, while the upper freshwater layer has diminished by 40 %. The species diversity of zooplankton and macrobenthos has halved. The occurrence of Atlantic cod likens Mogilnoe to some other Arctic marine lakes while the presence of large flocks of sea anemones, scyphomedusae and suberitid sponges makes it similar to tropical anchialine lakes. Lake Mogilnoe is not entirely biologically isolated; accidental introduction of species from the sea does occur. We argue that the idealised model of an isolated steady-state ecosystem can be applied to a marine lake with caution. A model of fluctuating abiotic environment and partial biological isolation portrays the real situation better.

Description: Two sediment cores retrieved from the southern Lomonosov Ridge (LR) in 2007 (core ALR07-26C from the top of the ridge, water depth 1359 m, and core ALR07-15C from the base of Geophysicists’ Spur, water depth 2500 m) were investigated for lithology (wt % 〉 63 μm, terrigenous lithic grains 〉500 μm) and microfossils. Prominent peaks of coarse-grained material in ALR07-26C represented largely by quartz and clastic rocks are regarded as inputs of ice and, especially, iceberg-rafted debris (IRD) of Eurasian origin. In accordance with previously obtained evidence from age-constrained cores from the central LR, the highest peak 4 is correlated with the MIS 6–5 boundary and the disintegration of the Saalian ice sheet. The three younger IRD peaks are provisionally correlated with the MIS 5–4, MIS 4–3, and MIS 2–1 boundaries, respectively. Small peaks of coarse-grained material in ALR07-15C dominated by various rocks in contrast represent local material transported by downslope slides mixed with some IRD. No calcareous microfossils occur in the cores, but only agglutinated benthic foraminifers are found. In ALR07-26C, they correlate with IRD-rich layers, which correspond to glacial terminations with more open-sea ice conditions and, probably, higher productivity in the sea-ice marginal zone. The Cyclammina-dominated assemblage in ALR07-26C below IRD peak 4 supports the proposed age estimate for this peak (MIS 6–5), as similar foraminiferal assemblages in other LR cores are recorded in sediments of MIS 7–9 and older. Younger assemblages show a transition from a Recurvoides-dominated assemblage in the early Late Pleistocene to a more “oligotrophic” recent assemblage with a predominance of Reophax and Rhabdammina.

Description: Epibenthos communities play an important role in the marine ecosystems of the Weddell Sea. Information on the factors controlling their structure and distribution are, however, still rare. In particular, the interactions between environmental factors and biotic assemblages are not fully understood. Nachtigaller Hill, a newly discovered seabed structure on the over-deepened shelf of the northwest Weddell Sea (Southern Ocean), offers a unique site to study these interactions in a high-latitude Antarctic setting. Based on high-resolution bathymetry and georeferenced biological data, the effect of the terrain and related environmental parameters on the epibenthos was assessed. At Nachtigaller Hill, both geomorphological and biological data showed complex distribution patterns, reflecting local processes such as iceberg scouring and locally amplified bottom currents. This variability was also generally reflected in the variable epibenthos distribution patterns although statistical analyses did not show strong correlations between the selected environmental parameters and species abundances. By analysing the interactions between environmental and biological patterns, this study provides crucial information towards a better understanding of the factors and processes that drive epibenthos communities on the shelves of the Weddell Sea and probably also on other Antarctic shelves.

Description: Mediterranean Outflow Water (MOW) is thought to be a key contributor to the strength and stability of Atlantic Meridional Overturning Circulation (AMOC), but the future of Mediterranean-Atlantic water exchange is uncertain. It is chiefly dependent on the difference between Mediterranean and Atlantic temperature and salinity characteristics, and as a semi-enclosed basin, the Mediterranean is particularly vulnerable to future changes in climate and water usage. Certainly, there is strong geologic evidence that the Mediterranean underwent dramatic salinity and sea-level fluctuations in the past. Here, we use a fully coupled atmosphere–ocean General Circulation Model to examine the impact of changes in Mediterranean-Atlantic exchange on global ocean circulation and climate. Our results suggest that MOW strengthens and possibly stabilises the AMOC not through any contribution towards NADW formation, but by delivering relatively warm, saline water to southbound Atlantic currents below 800 m. However, we find almost no climate signal associated with changes in Mediterranean-Atlantic flow strength. Mediterranean salinity, on the other hand, controls MOW buoyancy in the Atlantic and therefore affects its interaction with the shallow-intermediate circulation patterns that govern surface climate. Changing Mediterranean salinity by a factor of two reorganises shallow North Atlantic circulation, resulting in regional climate anomalies in the North Atlantic, Labrador and Greenland-Iceland-Norwegian Seas of ±4 °C or more. Although such major variations in salinity are believed to have occurred in the past, they are unlikely to occur in the near future. However, our work does suggest that changes in the Mediterranean’s hydrological balance can impact global-scale climate.

Description: Seafloormethane emission from the Quepos Slide on the submarine segment of the Costa Rica fore-arc margin was estimated by extrapolating flux measurements from individual seeps to the total area covered by bacterial mats. This approach is based on the combination of detailed mapping to determine the abundance of seeps and the application of a numerical model to estimate the amount of benthic methane fluxes. Model results suggest that the majority of the studied seeps transport rather limited amount of methane (on average: *177 lmol cm-2 a-1) into the water column due to moderate upward advection, allowing for intense anaerobic oxidation of methane (AOM; on average: 53 % of the methane flux is consumed). Depth-integrated AOM rates (56–1,538 lmol CH4 cm-2 a-1) are comparable with values reported from other active seep sites. The overall amount of dissolved methane released into the water column from the entire area covered by bacterial mats on the Quepos Slide is estimated to be about 0.28 9 106 mol a-1. This conservative estimate which relies on rather accurate determinations of seafloor methane fluxes emphasizes the potential importance of submarine slides as sites of natural methane seepage; however, at present the global extent of methane seepage from submarine slides is largely unknown.

Description: The surface sediments of two mud mounds (‘‘Mound 11’’ and ‘‘Mound 12’’) offshore southwest Costa Rica contain abundant authigenic carbonate concretions dominated by high-Mg calcite (14–20 mol-% MgCO3). Pore fluid geochemical profiles (sulfate, sulfide, methane, alkalinity, Ca and Mg) indicate recent carbonate precipitation within the zone of anaerobic oxidation of methane (AOM) at variable depths. The current location of the authigenic carbonate concretions is, however, not related to the present location of the AOM zone, suggesting mineral precipitation under past geochemical conditions as well as changes in the flow rates of upward migrating fluids. Stable oxygen and carbon isotope analysis of authigenic carbonate concretions yielded d18Ocarbonate values ranging between 34.0 and 37.7 % Vienna standard mean ocean water (VSMOW) and d13Ccarbonate values from -52.2 to -14.2 % Vienna Pee Dee belemnite (VPDB). Assuming that no temperature changes occurred during mineral formation, the authigenic carbonate concretions have been formed at in situ temperature of 4–5 °C. The d18Ocarbonate values suggest mineral formation from seawater-derived pore fluid (d18Oporefluid = 0 % VSMOW) for Mound 12 carbonate concretions but also the presence of an emanating diagenetic fluid (d18Oporefluid &5 %) in Mound 11. A positive correlation between d13Ccarbonate and d18Ocarbonate is observed, indicating the admixing of two different sources of dissolved carbon and oxygen in the sediments of the two mounds. The carbon of these sources are (1) marine bicarbonate (d13Cporefluid &0 %) and (2) bicarbonate which formed during the AOM (d13Cporefluid &-70 %). Furthermore, the d18Oporefluid composition, with values up to ?4.7 % Vienna standard mean ocean water (VSMOW), is interpreted to be affected by the presence of emanating, freshened and boronenriched fluids. Earlier, it has been shown that the origin of 18O-enriched fluids are deep diagenetic processes as it was indicated by the presence of methane with thermogenic signature (d13CCH4 = -38 %). A combination of present geochemical data with geophysical observations indicates that Mounds 11 and 12 represent a single fluid system interconnected by deep-seated fault(s).

Description: Larval fish growth and survival depends not only on prey quantity, but also on prey quality. To investigate effects of prey fatty acid concentration on larval herring growth, we collected different prey organisms and larval herring (Clupea harengus L.) in the Kiel Canal during the spring season of 2009. Along with biotic background data, we analysed fatty acids both in prey organisms and in the larvae and used biochemically derived growth rates of the larvae as the response variable. Larval herring reached their highest RNA/DNA derived growth rates only at high docosahexaenoic acid (DHA) concentration. When the ratio of copepodids to lesser quality cirriped nauplii was low, larval growth and larval DHA concentration were both significantly negatively affected. This was true even as prey abundance was increasing. This finding indicates that even in mixed, natural feeding conditions, growth variations are associated with DHA availability in larval fish.

Description: Understanding and quantifying ocean–atmosphere exchanges of the long-lived greenhouse gases carbon dioxide (CO2), nitrous oxide (N2O) and methane (CH4) are important for understanding the global biogeochemical cycles of carbon and nitrogen in the context of ongoing global climate change. In this chapter we summarise our current state of knowledge regarding the oceanic distributions, formation and consumption pathways, and oceanic uptake and emissions of CO2, N2O and CH4, with a particular emphasis on the upper ocean. We specifically consider the role of the ocean in regulating the tropospheric content of these important radiative gases in a world in which their tropospheric content is rapidly increasing and estimate the impact of global change on their present and future oceanic uptake and/or emission. Finally, we evaluate the various uncertainties associated with the most commonly used methods for estimating uptake and emission and identify future research needs.

Description: In analysis of climate variability or change it is often of interest how the spatial structure in modes of variability in two datasets differ from each other, e.g. between past and future climate or between models and observations. Often such analysis is based on Empirical Orthogonal Function (EOF) analysis or other simple indices of large-scale spatial structures. The present analysis lays out a concept on how two datasets of multivariate climate variability can be compared against each other on basis of EOF analysis and how the differences in the multivariate spatial structure between the two datasets can be quantified in terms of explained variance in the leading spatial patterns. It is also illustrated how the patterns of largest differences between the two datasets can be defined and interpreted. We illustrate this method on the basis of several well-defined artificial examples and by comparing our approach with examples of climate change studies from the literature. These literature examples include analysis of changes in the modes of variability under climate change for the sea level pressure (SLP) of the North Atlantic and Europe, the SLP of the Southern Hemisphere, the surface temperature of the Northern Hemisphere, the sea surface temperature of the North Pacific and for precipitation in the tropical Indo-Pacific.

Description: Recent studies show that mid-latitude SST variations over the Kuroshio-Oyashio Extension influence the atmospheric circulation. However, the impact of variations in SST in the Gulf Stream region on the atmosphere has been less studied. Understanding the atmospheric response to such variability can improve the climate predictability in the North Atlantic Sector. Here we use a relatively high resolution (∼1°) Atmospheric General Circulation Model to investigate the mechanisms linking observed 5-year low-pass filtered SST variability in the Gulf Stream region and atmospheric variability, with focus on precipitation. Our results indicate that up to 70 % of local convective precipitation variability on these timescales can be explained by Gulf Stream SST variations. In this region, SST and convective precipitation are strongly correlated in both summer (r = 0.73) and winter (r = 0.55). A sensitivity experiment with a prescribed local warm SST anomaly in the Gulf Stream region confirms that local SST drives most of the precipitation variability over the Gulf Stream. Increased evaporation connected to the anomalous warm SST plays a crucial role in both seasons. In summer there is an enhanced local SLP minimum, a concentrated band of low level convergence, deep upward motion and enhanced precipitation. In winter we also get enhanced precipitation, but a direct connection to deep vertical upward motion is not found. Nearly all of the anomalous precipitation in winter is connected to passing atmospheric fronts. In summer the connection between precipitation and atmospheric fronts is weaker, but still important.

Description: Subduction zones of continental, transitional, and oceanic settings, relative to the nature of the overriding plate, are compared in terms of trace element compositions of mafic to intermediate arc rocks, in order to evaluate the relationship between subduction parameters and the presence of subduction fluids. The continental Chilean Southern Volcanic Zone (SVZ) and the transitional to oceanic Central American Volcanic Arc (CAVA) show increasing degrees of melting with increasing involvement of slab fluids, as is typical for hydrous flux melting beneath arc volcanoes. At the SVZ, the central segment with the thinnest continental crust/lithosphere erupted the highest-degree melts from the most depleted sources, similar to the oceanic-like Nicaraguan segment of the CAVA. The northern part of the SVZ, located on the thickest continental crust/lithosphere, exhibits features more similar to Costa Rica situated on the Caribbean Large Igneous Province, with lower degrees of melting from more enriched source materials. The composition of the slab fluids is characteristic for each arc system, with a particularly pronounced enrichment in Pb at the SVZ and in Ba at the CAVA. A direct compositional relationship between the arc rocks and the corresponding marine sediments that are subducted at the trenches clearly shows that the compositional signature of the lavas erupted in the different arcs carries an inherited signal from the subducted sediments.

Description: The variability of the East Asian summer monsoon (EASM) is studied using a partially coupled climate model (PCCM) in which the ocean component is driven by observed monthly mean wind stress anomalies added to the monthly mean wind stress climatology from a fully coupled control run. The thermodynamic coupling between the atmospheric and oceanic components is the same as in the fully coupled model and, in particular, sea surface temperature (SST) is a fully prognostic variable. The results show that the PCCM simulates the observed SST variability remarkably well in the tropical and North Pacific and Indian Oceans. Analysis of the rainfall-SST and rainfall-SST tendency correlation shows that the PCCM exhibits local air-sea coupling as in the fully coupled model and closer to what is seen in observations than is found in an atmospheric model driven by observed SST. An ensemble of experiments using the PCCM is analysed using a multivariate EOF analysis to identify the two major modes of variability of the EASM. The PCCM simulates the spatial pattern of the first two modes seen in the ERA40 reanalysis as well as part of the variability of the first principal component (correlation up to 0.5 for the model ensemble mean). Different from previous studies, the link between the first principal component and ENSO in the previous winter is found to be robust for the ensemble mean throughout the whole period of 1958–2001. Individual ensemble members nevertheless show the breakdown in the relationship before the 1980’s as seen in the observations.

Description: Melt inclusions in olivine Fo83–72 from tephras of 1867, 1971 and 1992 eruptions of Cerro Negro volcano represent a series of basaltic to andesitic melts of narrow range of MgO (5.6–8 wt %) formed by ~46 wt % fractional crystallization of olivine (~6 wt %), plagioclase (~27 wt %), pyroxene (~13 wt %) and magnetite (〈1 wt %) from primitive basaltic melt (average SiO2 = 49 wt %, MgO = 7.6 wt %, H2O = 6 wt %) as it ascended to the surface from the depth of about 14 km. The crystallization occurred at increasing liquidus temperature from 1,050 to 1,090 °C in the pressure range from 400 to 50 MPa and was induced by release of mixed H2O–CO2 fluid from the melt at decreasing pressure. Matrix glass compositions fall at the high-Si end of the melt inclusion trend and represent the final stage of melt crystallization during and after eruption. The bulk compositions of erupted Cerro Negro magmas (tephras and lavas) range from high- to low-MgO (3–10 wt %) basalts, which form a compositional array crossing the trend of melt inclusions so that virtually no rock from Cerro Negro has composition akin to true melt represented by the inclusions. The variations of the bulk magma (rocks) and melt (melt inclusions) compositions can be generated in a dyke connecting a deep primitive magma reservoir with the Cerro Negro edifice. While the melt inclusions represent the compositional trend of instantaneous melts along the magma pathway at decreasing pressure and H2O content, occurrence of low-Mg to high-Mg basalts reflects the process of phenocryst re-distribution in progressively evolving melt. The crystallization scenario is anticipated to operate everywhere in dykes feeding basaltic volcanoes and can explain the predominance of plagioclase-rich high-Al basalts in island arc as well as typical compositional variations of magmas during single eruptions.

Description: Transition from subduction of normal to thickened oceanic crust occurs in the central portion of the Costa Rican margin, where large interplate earthquakes (M * 7) and abundant interseismic seismicity have been associated with subduction of bathymetric highs. We relocated *1,300 earthquakes recorded for 6 months by a combined on- and offshore seismological network using probabilistic earthquake relocation in a 3D P-wave velocity model. Most of the seismicity originated at the seismogenic zone of the plate boundary, appearing as an 18° dipping, planar cluster from 15 to 25–30 km depth, beneath the continental shelf. Several reverse focal mechanisms were resolved within the cluster. The upper limit of this interseismic interplate seismicity seems to be controlled primarily by the overlying-plate thickness and coherency, which in turn is governed by the erosional processes and fluid release and escape at temperatures lower than *100 to 120° C along the plate boundary. The downdip limit of the stick–slip behaviour collocates with relative low temperatures of *150 to 200° C, suggesting that it is controlled by serpentinization of the mantle wedge. The distribution of the interseismic interplate seismicity is locally modified by the presence of subducted seamounts at different depths. Unlike in northern Costa Rica, rupture of large earthquakes in the last two decades seems to coincide with the area defined by the interseismic interplate seismicity.

Description: Llaima and Villarrica are two of the most active volcanoes in the Chilean Southern Volcanic Zone and presently show contrasting types of activity. Llaima is a closed vent edifice with fumarolic activity, while Villarrica has an open vent with a lava lake, continuous degassing and tremor activity. This study is focused on characterizing the relationships between volcanic and seismic activity in the months before and after the 2010 M8.8 Maule earthquake, which was located in NNW direction from the volcanoes. Time series for tremors, long-period and volcano-tectonic events were obtained from the catalogue of the Volcanic Observatory of the Southern Andes (OVDAS) and from the SFB 574 temporary volcanic network. An increase in the amount of tremor activity, long-period events and degassing rates was observed at Villarrica weeks before the mainshock and continued at a high level also after it. This increase in activity is interpreted to be caused by enhanced magma influx at depth and may be unrelated to the Maule event. In Llaima, an increase in the volcano-tectonic activity was observed directly after the earthquake. The simultaneous post-earthquake activity at both volcanoes is consistent with a structural adjustment response. Since this enhanced activity lasted for more than a year, we suggest that it is related to a medium-term change in the static stress. Thus, the Maule earthquake may have affected both volcanoes, but did not trigger eruptions, from which we assume that none of the volcanoes were in a critical state.

Description: Here we present the first systematic investigation of volatile geochemistry along the Southern Volcanic Zone (SVZ) of Chile. Holocene olivine-hosted melt inclusions in the most mafic tephras sampled from 16 volcanoes along the volcanic front of the SVZ between 33°S and 43°S were analysed for pre-eruptive sulphur, chlorine, and major element contents. These results are combined with trace element compositions of the host whole rocks. The highest fractionation-corrected gas contents occur in the least-degassed melt inclusions from small monogenetic cones of Los Hornitos, Cabeza de Vaca, and Apagado from both the transitional and the southern-central SVZ, reaching ~3,000 μg/g S and 1,400 μg/g Cl, while the lowest abundances of ~1,100 μg/g S and ~600 μg/g Cl were found in the central SVZ at Volcán Lonquimay, Volcán Llaima, and Volcán Villarrica. Chlorine co-varies with trace element indicators for the degree of melting and/or source enrichment, such that the lowest Cl contents are found in high-degree melts from the most depleted mantle sources. The size of the volcanic edifices correlates inversely with Cl abundances in the melt. This could reflect more extensive degassing during ascent through the complex magma plumbing systems beneath the stratovolcanoes or greater dilution during larger degrees of melting of more depleted sources, or a combination of these factors. Compared to other subduction zones, the SVZ melt inclusions exhibit Cl and S abundances in the same range as most of those from the Central American and those from the Marianas arcs.

Description: There is evidence that the observed changes in winter North Atlantic Oscillation (NAO) drive a significant portion of Atlantic Multi Decadal Variability (AMV). However, whether the observed decadal NAO changes can be forced by the ocean is controversial. There is also evidence that artificially imposed multi-decadal stratospheric changes can impact the troposphere in winter. But the origins of such stratospheric changes are still unclear, especially in early to mid winter, where the radiative ozone-impact is negligible. Here we show, through observational analysis and atmospheric model experiments, that large-scale Atlantic warming associated with AMV drives high-latitude precursory stratospheric warming in early to mid winter that propagates downward resulting in a negative tropospheric NAO in late winter. The mechanism involves stratosphere/troposphere dynamical coupling, and can be simulated to a large extent, but only with a stratosphere resolving model (i.e., high-top). Further analysis shows that this precursory stratospheric response can be explained by the shift of the daily extremes toward more major stratospheric warming events. This shift cannot be simulated with the atmospheric (low-top) model configuration that poorly resolves the stratosphere and implements a sponge layer in upper model levels. While the potential role of the stratosphere in multi-decadal NAO and Atlantic meridional overturning circulation changes has been recognised, our results show that the stratosphere is an essential element of extra-tropical atmospheric response to ocean variability. Our findings suggest that the use of stratosphere resolving models should improve the simulation, prediction, and projection of extra-tropical climate, and lead to a better understanding of natural and anthropogenic climate change.

Description: The continental shelf and slope of southern Central Chile have been subject to a number of international as well as Chilean research campaigns over the last 30 years. This work summarizes the geologic setting of the southern Central Chilean Continental shelf (33°S–43°S) using recently published geophysical, seismological, sedimentological and bio-geochemical data. Additionally, unpublished data such as reflection seismic profiles, swath bathymetry and observations on biota that allow further insights into the evolution of this continental platform are integrated. The outcome is an overview of the current knowledge about the geology of the southern Central Chilean shelf and upper slope. We observe both patches of reduced as well as high recent sedimentation on the shelf and upper slope, due to local redistribution of fluvial input, mainly governed by bottom currents and submarine canyons and highly productive upwelling zones. Shelf basins show highly variable thickness of Oligocene-Quaternary sedimentary units that are dissected by the marine continuations of upper plate faults known from land. Seismic velocity studies indicate that a paleo-accretionary complex that is sandwiched between the present, relatively small active accretionary prism and the continental crust forms the bulk of the continental margin of southern Central Chile.

Description: Methane (CH4) concentrations and CH4 stable carbon isotopic composition (d13CCH4 ) were investigated in the water column within Jaco Scar. It is one of several scars formed by massive slides resulting from the subduction of seamounts offshore Costa Rica, a process that can open up structural and stratigraphical pathways for migrating CH4. The release of large amounts of CH4 into the adjacent water column was discovered at the outcropping lowermost sedimentary sequence of the hanging wall in the northwest corner of Jaco Scar, where concentrations reached up to 1,500 nmol L-1. There CH4-rich fluids seeping from the sedimentary sequence stimulate both growth and activity of a dense chemosynthetic community. Additional point sources supplying CH4 at lower concentrations were identified in density layers above and below the main plume from light carbon isotope ratios. The injected CH4 is most likely a mixture of microbial and thermogenic CH4 as suggested by d13CCH4 values between -50 and -62 % Vienna Pee Dee Belemnite. This CH4 spreads along isopycnal surfaces throughout the whole area of the scar, and the concentrations decrease due to mixing with ocean water and microbial oxidation. The supply of CH4 appears to be persistent as repeatedly high CH4 concentrations were found within the scar over 6 years. The maximum CH4 concentration and average excess CH4 concentration at Jaco Scar indicate that CH4 seepage from scars might be as significant as seepage from other tectonic structures in the marine realm. Hence, taking into account the global abundance of scars, such structures might constitute a substantial, hitherto unconsidered contribution to natural CH4 sources at the seafloor.

Description: The response of coccolithophore calcification to ocean acidification has been studied in culture experiments as well as in present and past oceans. The response, however, is different between species and strains, and for the relatively small carbonate chemistry changes observed in natural environments, a uniform response of the entire coccolithophore community has not been documented so far. Moreover, previous palaeo-studies basically focus on changes in coccolith weight due to increasing CO2 and the resulting changes in the carbonate system, and only few studies focus on the influence of other environmental factors. In order to untangle changes in coccolithophore calcification due to environmental factors such as temperature and/or productivity from changes caused by increasing pCO2 and decreasing carbonate ion concentration, we here present a study on coccolith calcification from the Holocene North Atlantic Ocean. The pre-industrial Holocene, with its predominantly stable atmospheric CO2, provides the conditions for such a comprehensive analysis. For an analysis on changes in major components of Holocene coccolithophores under natural conditions, the family Noelaerhabdaceae was selected, which constitutes the main part of the assemblage in the North Atlantic. Records of average coccolith weights from three Holocene sediment cores along a north–south transect in the North Atlantic were analysed. During the Holocene, mean weight (and therefore calcification) of Noelaerhabdaceae (Emiliania huxleyi and Gephyrocapsa) coccoliths decreased at the Azores (Geofar KF 16) from around 7 to 6 pg, but increased at the Rockall Plateau (ODP site 980) from around 6 to 8 pg, and at the Vøring Plateau (MD08-3192) from 7 to 10 pg. The amplitude of average weight variability is within the range of glacial–interglacial changes that were interpreted to be an effect of decreasing carbonate ion concentration. By comparison with SEM assemblage counts, we show that weight changes are not only partly due to variations in the coccolithophore assemblage but also an effect of a change in calcification and/or morphotype variability within single species. Our results indicate that there is no single key factor responsible for the observed changes in coccolith weight. A major increase in coccolith weight occurs during a slight decrease in carbonate ion concentration in the late Holocene at the Rockall Plateau and Vøring Plateau. Here, more favourable productivity conditions apparently lead to an increase in coccolith weight, either due to the capability of coccolithophore species, especially E. huxleyi, to adapt to decreasing carbonate ion concentration or due to a shift towards heavier calcifying morphotypes.

Description: Four sediment cores from the central and northern Greenland Sea basin, a crucial area for the renewal of North Atlantic deep water, were analyzed for planktic foraminiferal fauna, planktic and benthic stable oxygen and carbon isotopes as well as ice-rafted debris to reconstruct the environmental variability in the last 23 kyr. During the Last Glacial Maximum, the Greenland Sea was dominated by cold and sea-ice bearing surface water masses. Meltwater discharges from the surrounding ice sheets affected the area during the deglaciation, influencing the water mass circulation. During the Younger Dryas interval the last major freshwater event occurred in the region. The onset of the Holocene interglacial was marked by an increase in the advection of Atlantic Water and a rise in sea surface temperatures (SST). Although the thermal maximum was not reached simultaneously across the basin, benthic isotope data indicate that the rate of overturning circulation reached a maximum in the central Greenland Sea around 7 ka. After 6–5 ka a SST cooling and increasing sea-ice cover is noted. Conditions during this so-called "Neoglacial" cooling, however, changed after 3 ka, probably due to enhanced sea-ice expansion, which limited the deep convection. As a result, a well stratified upper water column amplified the warming of the subsurface waters in the central Greenland Sea, which were fed by increased inflow of Atlantic Water from the eastern Nordic Seas. Our data reveal that the Holocene oceanographic conditions in the Greenland Sea did not develop uniformly. These variations were a response to a complex interplay between the Atlantic and Polar water masses, the rate of sea-ice formation and melting and its effect on vertical convection intensity during times of Northern Hemisphere insolation changes.

Description: We investigate the respective role of variations in subpolar deep water formation and Nordic Seas overflows for the decadal to multidecadal variability of the Atlantic meridional overturning circulation (AMOC). This is partly done by analysing long (order of 1000 years) control simulations with five coupled climate models. For all models, the maximum influence of variations in subpolar deep water formation is found at about 45° N, while the maximum influence of variations in Nordic Seas overflows is rather found at 55 to 60° N. Regarding the two overflow branches, the influence of variations in the Denmark Strait overflow is, for all models, substantially larger than that of variations in the overflow across the Iceland–Scotland Ridge. The latter might, however, be underestimated, as the models in general do not realistically simulate the flow path of the Iceland–Scotland overflow water south of the Iceland–Scotland Ridge. The influence of variations in subpolar deep water formation is, on multimodel average, larger than that of variations in the Denmark Strait overflow. This is true both at 45° N, where the maximum standard deviation of decadal to multidecadal AMOC variability is located for all but one model, and at the more classical latitude of 30° N. At 30° N, variations in subpolar deep water formation and Denmark Strait overflow explain, on multimodel average, about half and one-third respectively of the decadal to multidecadal AMOC variance. Apart from analysing multimodel control simulations, we have performed sensitivity experiments with one of the models, in which we suppress the variability of either subpolar deep water formation or Nordic Seas overflows. The sensitivity experiments indicate that variations in subpolar deep water formation and Nordic Seas overflows are not completely independent. We further conclude from these experiments that the decadal to multidecadal AMOC variability north of about 50° N is mainly related to variations in Nordic Seas overflows. At 45° N and south of this latitude, variations in both subpolar deep water formation and Nordic Seas overflows contribute to the AMOC variability, with neither of the processes being very dominant compared to the other.

Description: Methyl iodide (CH3I}, bromoform (CHBr3) and dibromomethane (CH2Br2), which are produced naturally in the oceans, take part in ozone chemistry both in the troposphere and the stratosphere. The significance of oceanic upwelling regions for emissions of these trace gases in the global context is still uncertain although they have been identified as important source regions. To better quantify the role of upwelling areas in current and future climate, this paper analyzes major factors that influenced halocarbon emissions from the tropical North East Atlantic including the Mauritanian upwelling during the DRIVE expedition. Diel and regional variability of oceanic and atmospheric CH3I, CHBr3 and CH2Br2 was determined along with biological and meteorological parameters at six 24 h-stations. Low oceanic concentrations of CH3I from 0.1–5.4 pmol L-1 were equally distributed throughout the investigation area. CHBr3 of 1.0–42.4 pmol L-1 and CH2Br2 of 1.0–9.4 pmol L-1 were measured with maximum concentrations close to the Mauritanian coast. Atmospheric mixing rations of CH3I of up to 3.3, CHBr3 to 8.9 and CH2Br2 to 3.1 ppt above the upwelling and 1.8, 12.8, respectively 2.2 ppt at a Cape Verdean coast were detected during the campaign. While diel variability in CH3I emissions could be mainly ascribed to oceanic non-biological production, no main driver was identified for its emissions in the entire study region. In contrast, oceanic bromocarbons resulted from biogenic sources which were identified as regional drivers of their sea-to-air fluxes. The diel impact of wind speed on bromocarbon emissions increased with decreasing distance to the coast. The height of the marine atmospheric boundary layer (MABL) was determined as an additional factor influencing halocarbon emissions. Oceanic and atmospheric halocarbons correlated well in the study region and in combination with high oceanic CH3I, CHBr3 and CH2Br2 concentrations, local hot spots of atmospheric halocarbons could solely be explained by marine sources. This conclusion is in contrast with previous studies that hypothesized the occurrence of elevated atmospheric halocarbons over the eastern tropical Atlantic mainly originating from the West-African continent.

Description: Marine ecosystem models used to investigate how global change affects ocean ecosystems and their functioning typically omit pelagic plankton diversity. Diversity, however, may affect functions such as primary production and their sensitivity to environmental changes. Here we use a global ocean ecosystem model that explicitly resolves phytoplankton diversity by defining subtypes within four phytoplankton functional types (PFTs). We investigate the model's ability to capture diversity effects on primary production under environmental change. An idealized scenario with a sudden reduction in vertical mixing causes diversity and primary-production changes that turn out to be largely independent of the number of coexisting phytoplankton subtypes. The way diversity is represented in the model provides a small number of niches with respect to nutrient use in accordance with the PFTs defined in the model. Increasing the number of phytoplankton subtypes increases the resolution within the niches. Diversity effects such as niche complementarity operate between, but not within PFTs, and are constrained by the variety of traits and trade-offs resolved in the model. The number and nature of the niches formulated in the model, for example via trade-offs or different PFTs, thus determines the diversity effects on ecosystem functioning captured in ocean ecosystem models.

Description: In a recent study it was illustrated that the El Nino Southern Oscillation (ENSO) mode can exist in the absence of any ocean dynamics. This oscillating mode exists just due to the interaction between atmospheric heat fluxes and ocean heat capacity. The primary purpose of this study is to further explore these atmospheric Slab Ocean ENSO dynamics and therefore the role of positive atmospheric feedbacks in model simulations and observations. The positive solar radiation feedback to sea surface temperature (SST), due to reduced cloud cover for anomalous warm SSTs, is the main positive feedback in the Slab Ocean El Nino dynamics. The strength of this positive cloud feedback is strongly related to the strength of the equatorial cold tongue. The combination of positive latent and sensible heat fluxes to the west and negative ones to the east of positive anomalies leads to the westward propagation of the SST anomalies, which allows for oscillating behavior with a preferred period of 6-7 years. Several indications are found that parts of these dynamics are indeed observed and simulated in other atmospheric or coupled general circulation models (AGCMs or CGCMs). The CMIP3 AGCM-slab ensemble of 13 different AGCM simulations shows unstable ocean-atmosphere interactions along the equatorial Pacific related to stronger cold tongues. In observations and in the CMIP3 and CMIP5 CGCM model ensemble the strength and sign of the cloud feedback is a function of the strength of the cold tongue. In summary, this indicates that the Slab Ocean El Nino dynamics are indeed a characteristic of the equatorial Pacific climate that is only dominant or significantly contributing to the ENSO dynamics if the SST cold tongue is sufficiently strong. In the observations this is only the case during strong La Nina conditions. The presence of the Slab Ocean ENSO atmospheric feedbacks in observations and CGCM model simulations implies that the family of physical ENSO modes does have another member, which is entirely driven by atmospheric processes and does not need to have the same spatial pattern nor the same time scales as the main ENSO dynamics.

Description: Sediments of Lake Van, Turkey, preserve one of the most complete records of continental climate change in the Near East since the Middle Pleistocene. We used seismic reflection profiles to infer past changes in lake level and discuss potential causes related to changes in climate, volcanism, and regional tectonics since the formation of the lake ca. 600 ka ago. Lake Van's water level ranged by as much as 600 m during the past 600 ka. Five major lowstands occurred, at 600, 365-340, 290-230, 150-130 and 30-14 ka. During Stage A, between about 600 and 230 ka, lake level changed dramatically, by hundreds of meters, but phases of low and high stands were separated by long time intervals. Changes in the lake level were more frequent during the past 230 ka, but less dramatic, on the order of a few tens of meters. We identified period B1 as a time of stepwise transgressions between 230 and 150 ka, followed by a short regression between ca. 150 and 130 ka. Lake level rose stepwise during period B2, until 30 ka. During the past 30 ka, a regression and a final transgression occurred, each lasting about 15 ka. The major lowstand periods in Lake Van occurred during glacial periods, suggesting climatic control on water level changes (i.e. greatly reduced precipitation led to lower lake levels). Although climate forcing was the dominant cause for dramatic water level changes in Lake Van, volcanic and tectonic forcing factors may have contributed as well. For instance, the number of distinct tephra layers, some several meters thick, increases dramatically in the uppermost 100 m of the sediment record (i.e. the past 230 ka), an interval that coincides largely with low-magnitude lake level fluctuations. Tectonic activity, highlighted by extensional and/or compressional faults across the basin margins, probably also affected the lake level of Lake Van in the past.

Description: In this paper, we constrain the input and output fluxes of H2O, Cl and S into the southern-central Chilean subduction zone (31°S–46°S). We determine the input flux by calculating the amounts of water, chlorine and sulfur that are carried into the subduction zone in subducted sediments, igneous crust and hydrated lithospheric mantle. The applied models take into account that latitudinal variations in the subducting Nazca plate impact the crustal porosity and the degree of upper mantle serpentinization and thus water storage in the crust and mantle. In another step, we constrain the output fluxes of the subduction zone both to the subcontinental lithospheric mantle and to the atmosphere–geosphere–ocean by the combined use of gas flux determinations at the volcanic arc, volume calculations of volcanic rocks and the combination of mineralogical and geothermal models of the subduction zone. The calculations indicate that about 68 Tg/m/Ma of water enters the subduction zone, as averaged over its total length of 1,480 km. The volcanic output on the other hand accounts for 2 Tg/m/Ma or 3 % of that input. We presume that a large fraction of the volatiles that are captured within the subducting sediments (which accounts for roughly one-third of the input) are cycled back into the ocean through the forearc. This assumption is however questioned by the present lack of evidence for major venting systems of the submarine forearc. The largest part of the water that is carried into the subduction zone in the crust and hydrated mantle (accounting for two-thirds of the input) appears to be transported beyond the volcanic arc.

Description: After more than a decade of multidisciplinary studies of the Central American subduction zone mainly in the framework of two large research programmes, the US MARGINS program and the German Collaborative Research Center SFB 574, we here review and interpret the data pertinent to quantify the cycling of mineral-bound volatiles (H2O, CO2, Cl, S) through this subduction system. For input-flux calculations, we divide the Middle America Trench into four segments differing in convergence rate and slab lithological profiles, use the latest evidence for mantle serpentinization of the Cocos slab approaching the trench, and for the first time explicitly include subduction erosion of forearc basement. Resulting input fluxes are 40–62 (53) Tg/Ma/m H2O, 7.8–11.4 (9.3) Tg/Ma/m CO2, 1.3–1.9 (1.6) Tg/Ma/m Cl, and 1.3–2.1 (1.6) Tg/Ma/m S (bracketed are mean values for entire trench length). Output by cold seeps on the forearc amounts to 0.625–1.25 Tg/Ma/m H2O partly derived from the slab sediments as determined by geochemical analyses of fluids and carbonates. The major volatile output occurs at the Central American volcanic arc that is divided into ten arc segments by dextral strike-slip tectonics. Based on volcanic edifice and widespread tephra volumes as well as calculated parental magma masses needed to form observed evolved compositions, we determine long-term (105 years) average magma and K2O fluxes for each of the ten segments as 32–242 (106) Tg/Ma/m magma and 0.28–2.91 (1.38) Tg/Ma/m K2O (bracketed are mean values for entire Central American volcanic arc length). Volatile/K2O concentration ratios derived from melt inclusion analyses and petrologic modelling then allow to calculate volatile fluxes as 1.02–14.3 (6.2) Tg/Ma/m H2O, 0.02–0.45 (0.17) Tg/Ma/m CO2, and 0.07–0.34 (0.22) Tg/Ma/m Cl. The same approach yields long-term sulfur fluxes of 0.12–1.08 (0.54) Tg/Ma/m while present-day open-vent SO2-flux monitoring yields 0.06–2.37 (0.83) Tg/Ma/m S. Input–output comparisons show that the arc water fluxes only account for up to 40 % of the input even if we include an “invisible” plutonic component constrained by crustal growth. With 20–30 % of the H2O input transferred into the deeper mantle as suggested by petrologic modeling, there remains a deficiency of, say, 30–40 % in the water budget. At least some of this water is transferred into two upper-plate regions of low seismic velocity and electrical resistivity whose sizes vary along arc: one region widely envelopes the melt ascent paths from slab top to arc and the other extends obliquely from the slab below the forearc to below the arc. Whether these reservoirs are transient or steady remains unknown.

Description: Two consecutive summer upwelling events, each lasting for less than 24 h, were surveyed in high temporal and vertical resolution close to the Boknis Eck time-series station (BE) in the western Belt Sea (Baltic Sea) in summer 2010 with an autonomous glider. Driven only by moderate offshore winds both events resulted in more than 5 K cooling of surface waters, while only for the second event were significant irreversible changes in the vertical stratification observed. Generalizing the glider survey observations with hourly wind data from nearby meteorological stations, it is found that upwelling in the BE area occurs for wind directions between 190 to 260° and wind speed exceeding 4 m s−1. Based on these thresholds the wind-induced summer (June to September) upwelling conditions in the BE area for the period 1982 to 2012 are reconstructed. On average about 18 days of upwelling favourable wind conditions are found for the four summer months, with significant interannual variability ranging from 7.7 days (2006) to more than 28 days (1985). By aligning upwelling favourable wind conditions with the monthly BE surveys it is found that extreme anomalies in BE surveys follow extended periods of upwelling favourable winds.

Description: The Surface Ocean CO2 Atlas (SOCAT), an activity of the international marine carbon research community, provides access to synthesis and gridded fCO2 (fugacity of carbon dioxide) products for the surface oceans. Version 2 of SOCAT is an update of the previous release (version 1) with more data (increased from 6.3 million to 10.1 million surface water fCO2 values) and extended data coverage (from 1968–2007 to 1968–2011). The quality control criteria, while identical in both versions, have been applied more strictly in version 2 than in version 1. The SOCAT website (http://www.socat.info/) has links to quality control comments, metadata, individual data set files, and synthesis and gridded data products. Interactive online tools allow visitors to explore the richness of the data. Applications of SOCAT include process studies, quantification of the ocean carbon sink and its spatial, seasonal, year-to-year and longerterm variation, as well as initialisation or validation of ocean carbon models and coupled climate-carbon models.

Description: Estuarine turbidity maxima (ETM) play an impor- tant role in zooplankton and larval fish productivity in many estuaries. Yet in many of these systems, little is known about the food web that supports this secondary production. To see if phytoplankton have the potential to be a component of the ETM food web in the Chesapeake Bay estuary a series of cruises were carried out to determine the biomass distribution and floral composition of phytoplankton in and around the ETM during the winter and spring using fluorometry, high- performance liquid chromatography (HPLC), and microscopy. Two distinct phytoplankton communities were observed along the salinity gradient. In lower salinity waters, biomass was low and the community was composed mostly of diatoms, while in more saline waters biomass was high and the community was composed mostly of mixotrophic dinoflagellates, which were often concentrated in a thin layer below the pycnocline. Phytoplankton biomass was always low in the ETM, but high concentrations of phytoplankton pigment degradation products and cellular remains were often observed suggesting that this was an area of high phytoplankton mortality and/or an area where phytoplankton derived particulate organic matter was being trapped. These results, along with a box model analysis, suggest that under certain hydrodynamic conditions phyto- plankton derived organic matter can be trapped in ETM and potentially play a role in fueling secondary production.

Description: Production pathways of the prominent volatile organic halogen compound methyl iodide (CH3I) are not fully understood. Based on observations, production of CH3I via photochemical degradation of organic material or via phytoplankton production has been proposed. Additional insights could not be gained from correlations between observed biological and environmental variables or from biogeochemical modeling to identify unambiguously the source of methyl iodide. In this study, we aim to address this question of source mechanisms with a three-dimensional global ocean general circulation model including biogeochemistry (MPIOM-HAMOCC (MPIOM - Max Planck Institute Ocean Model HAMOCC - HAMburg Ocean Carbon Cycle model)) by carrying out a series of sensitivity experiments. The simulated fields are compared with a newly available global data set. Simulated distribution patterns and emissions of CH3I differ largely for the two different production pathways. The evaluation of our model results with observations shows that, on the global scale, observed surface concentrations of CH3I can be best explained by the photochemical production pathway. Our results further emphasize that correlations between CH3I and abiotic or biotic factors do not necessarily provide meaningful insights concerning the source of origin. Overall, we find a net global annual CH3I air-sea flux that ranges between 70 and 260 Gg yr(-1). On the global scale, the ocean acts as a net source of methyl iodide for the atmosphere, though in some regions in boreal winter, fluxes are of the opposite direction (from the atmosphere to the ocean).

Description: In this paper we provide an overview of new knowledge on oxygen depletion (hypoxia) and related phenomena in aquatic systems resulting from the EU-FP7 project HYPOX ("In situ monitoring of oxygen depletion in hypoxic ecosystems of coastal and open seas, and landlocked water bodies", www.hypox.net). In view of the anticipated oxygen loss in aquatic systems due to eutrophication and climate change, HYPOX was set up to improve capacities to monitor hypoxia as well as to understand its causes and consequences. Temporal dynamics and spatial patterns of hypoxia were analyzed in field studies in various aquatic environments, including the Baltic Sea, the Black Sea, Scottish and Scandinavian fjords, Ionian Sea lagoons and embayments, and Swiss lakes. Examples of episodic and rapid (hours) occurrences of hypoxia, as well as seasonal changes in bottom-water oxygenation in stratified systems, are discussed. Geologically driven hypoxia caused by gas seepage is demonstrated. Using novel technologies, temporal and spatial patterns of water-column oxygenation, from basin-scale seasonal patterns to meter-scale sub-micromolar oxygen distributions, were resolved. Existing multidecadal monitoring data were used to demonstrate the imprint of climate change and eutrophication on long-term oxygen distributions. Organic and inorganic proxies were used to extend investigations on past oxygen conditions to centennial and even longer timescales that cannot be resolved by monitoring. The effects of hypoxia on faunal communities and biogeochemical processes were also addressed in the project. An investigation of benthic fauna is presented as an example of hypoxia-devastated benthic communities that slowly recover upon a reduction in eutrophication in a system where naturally occurring hypoxia overlaps with anthropogenic hypoxia. Biogeochemical investigations reveal that oxygen intrusions have a strong effect on the microbially mediated redox cycling of elements. Observations and modeling studies of the sediments demonstrate the effect of seasonally changing oxygen conditions on benthic mineralization pathways and fluxes. Data quality and access are crucial in hypoxia research. Technical issues are therefore also addressed, including the availability of suitable sensor technology to resolve the gradual changes in bottom-water oxygen in marine systems that can be expected as a result of climate change. Using cabled observatories as examples, we show how the benefit of continuous oxygen monitoring can be maximized by adopting proper quality control. Finally, we discuss strategies for state-of-the-art data archiving and dissemination in compliance with global standards, and how ocean observations can contribute to global earth observation attempts.

Description: Late Miocene tectonic changes in Mediterranean–Atlantic connectivity and climatic changes caused Mediterranean salinity to fluctuate dramatically, including a ten-fold increase and near-freshening. Recent proxy- and model-based evidence suggests that at times during this Messinian Salinity Crisis (MSC, 5.96–5.33 Ma), highly saline and highly fresh Mediterranean water flowed into the North Atlantic Ocean, whilst at others, no Mediterranean Outflow Water (MOW) reached the Atlantic. By running extreme, sensitivity-type experiments with a fully coupled ocean–atmosphere general circulation model, we investigate the potential of these various MSC MOW scenarios to impact global-scale climate. The simulations suggest that although the effect remains relatively small, MOW had a greater influence on North Atlantic Ocean circulation and climate than it does today. We also find that depending on the presence, strength and salinity of MOW, the MSC could have been capable of cooling mid–high northern latitudes by a few degrees, with the greatest cooling taking place in the Labrador, Greenland–Iceland–Norwegian and Barents seas. With hypersaline MOW, a component of North Atlantic Deep Water formation shifts to the Mediterranean, strengthening the Atlantic Meridional Overturning Circulation (AMOC) south of 35° N by 1.5–6 Sv. With hyposaline MOW, AMOC completely shuts down, inducing a bipolar climate anomaly with strong cooling in the north (mainly −1 to −3 °C, but up to −8 °C) and weaker warming in the south (up to +0.5 to +2.7 °C). These simulations identify key target regions and climate variables for future proxy reconstructions to provide the best and most robust test cases for (a) assessing Messinian model performance, (b) evaluating Mediterranean–Atlantic connectivity during the MSC and (c) establishing whether or not the MSC could ever have affected global-scale climate.

Description: Most of the short-lived biogenic and anthropogenic chemical species that are emitted into the atmosphere break down efficiently by reaction with OH and do not reach the stratosphere. Here we show the existence of a pronounced minimum in the tropospheric column of ozone over the West Pacific, the main source region for stratospheric air, and suggest a corresponding minimum of the tropospheric column of OH. This has the potential to amplify the impact of surface emissions on the stratospheric composition compared to the impact when assuming globally uniform OH conditions. Specifically, the role of emissions of biogenic halogenated species for the stratospheric halogen budget and the role of increasing emissions of SO2 in Southeast Asia or from minor volcanic eruptions for the increasing stratospheric aerosol loading need to be reassessed in light of these findings. This is also important since climate change will further modify OH abundances and emissions of halogenated species. Our study is based on ozone sonde measurements carried out during the TransBrom cruise with the RV Sonne roughly along 140-150 degrees E in October 2009 and corroborating ozone and OH measurements from satellites, aircraft campaigns and FTIR instruments. Model calculations with the GEOS-Chem Chemistry and Transport Model (CTM) and the ATLAS CTM are used to simulate the tropospheric OH distribution over the West Pacific and the transport pathways to the stratosphere. The potential effect of the OH minimum on species transported into the stratosphere is shown via modeling the transport and chemistry of CH2Br2 and SO2.

Description: Silvetia babingtonii is a potentially economic brown alga for sources of food and high-value added utilization. So far, sporeling nursery and field cultivation has not been successful. The lack of knowledge on development and life cycle of this alga hinder the development of techniques for the sporeings and cultivation. In this study, internal structure of oogonium and antherium of S. babingtonii was observed with hematoxylin and eosin staining and through microscope. Meanwhile, early development from zygotes to juvenile sporelings was studied at 20 degrees C under 60-100 mu mol photons m(-2) s(-1). Zygotes germinated and divided into thallus and rhizoid cells. The larger thallus cells further divided and developed into juvenile sporelings; while the smaller rhizoid cells divided and elongated into rhizoid hairs. These findings documented the life cycle of S. babingtonii and provided fundamental knowledge for sporeling nursery in the near future.

Description: It has been proposed that increasing levels of pCO(2) in the surface ocean will lead to more partitioning of the organic carbon fixed by marine primary production into the dissolved rather than the particulate fraction. This process may result in enhanced accumulation of dissolved organic carbon (DOC) in the surface ocean and/or concurrent accumulation of transparent exopolymer particles (TEPs), with important implications for the functioning of the marine carbon cycle. We investigated this in shipboard bioassay experiments that considered the effect of four different pCO(2) scenarios (ambient, 550, 750 and 1000 mu atm) on unamended natural phytoplankton communities from a range of locations in the northwest European shelf seas. The environmental settings, in terms of nutrient availability, phytoplankton community structure and growth conditions, varied considerably between locations. We did not observe any strong or consistent effect of pCO(2) on DOC production. There was a significant but highly variable effect of pCO(2) on the production of TEPs. In three of the five experiments, variation of TEP production between pCO(2) treatments was caused by the effect of pCO(2) on phytoplankton growth rather than a direct effect on TEP production. In one of the five experiments, there was evidence of enhanced TEP production at high pCO(2) (twice as much production over the 96 h incubation period in the 750 mu atm treatment compared with the ambient treatment) independent of indirect effects, as hypothesised by previous studies. Our results suggest that the environmental setting of experiments (community structure, nutrient availability and occurrence of phytoplankton growth) is a key factor determining the TEP response to pCO(2) perturbations.

Description: Four carbonate system variables were measured in surface waters during a cruise aimed at investigating ocean acidification impacts traversing northwestern European shelf seas in the summer of 2011. High-resolution surface water data were collected for partial pressure of carbon dioxide (pCO2; using two independent instruments) and pH using the total pH scale (pHT), in addition to discrete measurements of total alkalinity and dissolved inorganic carbon. We thus overdetermined the carbonate system (four measured variables, two degrees of freedom), which allowed us to evaluate the level of agreement between the variables on a cruise whose main aim was not intercomparison, and thus where conditions were more representative of normal working conditions. Calculations of carbonate system variables from other measurements generally compared well with direct observations of the same variables (Pearson's correlation coefficient always greater than or equal to 0.94; mean residuals were similar to the respective accuracies of the measurements). We therefore conclude that four of the independent data sets of carbonate chemistry variables were of high quality. A diurnal cycle with a maximum amplitude of 41 μatm was observed in the difference between the pCO2 values obtained by the two independent analytical pCO2 systems, and this was partly attributed to irregular seawater flows to the equilibrator and partly to biological activity inside the seawater supply and one of the equilibrators. We discuss how these issues can be addressed to improve carbonate chemistry data quality on future research cruises.

Description: Nitrate (NO3-) is the major nutrient responsible for coastal eutrophication worldwide and its production is related to intensive food production and fossil-fuel combustion. In the Baltic Sea NO3- inputs have increased 4-fold over recent decades and now remain constantly high. NO3- source identification is therefore an important consideration in environmental management strategies. In this study focusing on the Baltic Sea, we used a method to estimate the proportional contributions of NO3- from atmospheric deposition, N-2 fixation, and runoff from pristine soils as well as from agricultural land. Our approach combines data on the dual isotopes of NO3- (delta N-15-NO3- and delta O-18-NO3-) in winter surface waters with a Bayesian isotope mixing model (Stable Isotope Analysis in R, SIAR). Based on data gathered from 47 sampling locations over the entire Baltic Sea, the majority of the NO3- in the southern Baltic was shown to derive from runoff from agricultural land (33-100 %), whereas in the northern Baltic, i.e. the Gulf of Bothnia, NO3- originates from nitrification in pristine soils (34-100 %). Atmospheric deposition accounts for only a small percentage of NO3- levels in the Baltic Sea, except for contributions from northern rivers, where the levels of atmospheric NO3- are higher. An additional important source in the central Baltic Sea is N-2 fixation by diazotrophs, which contributes 49-65% of the overall NO3- pool at this site. The results obtained with this method are in good agreement with source estimates based upon delta N-15 values in sediments and a three-dimensional ecosystem model, ERGOM. We suggest that this approach can be easily modified to determine NO3- sources in other marginal seas or larger near-coastal areas where NO3- is abundant in winter surface waters when fractionation processes are minor.

Description: Since the discovery of the green sulfur bacteria and the first description by Larsen (1952), this group of bacteria has gained much interest because of a number of highly interesting features. These include the unique structures of the photosynthetic apparatus and the presence of small organelles, the chlorosomes, which act as light-harvesting antenna. Chlorosomes are very powerful light receptors that can capture minute amounts of light and enable the green sulfur bacteria to perform photosynthesis and to grow at very low-light intensities. This has important ecological consequences, because the efficient light harvesting determines the ecological niche of these bacteria at the lowermost part of stratified environments, where the least of light is available. Furthermore, the strict dependency on photosynthesis to provide energy for growth and the obligate phototrophy of the green sulfur bacteria together with their characteristic sulfur metabolism has provoked much interest in their physiology, ecology, and genomics. The oxidation of sulfide as the outmost important photosynthetic electron donor of the green sulfur bacteria involves the deposition of elemental sulfur globules outside the cells and separates the process of sulfide oxidation to sulfate clearly into two steps. In the phylogenetic-based taxonomy, the green sulfur bacteria are treated as family Chlorobiaceae with the genera Chlorobium, Chlorobaculum, Prosthecochloris, and Chloroherpeton.

Description: The Kiloniellaceae family is represented currently by a single genus Kiloniella with the species Kiloniella laminariae as type species. Kiloniella laminariae was isolated from the marine macroalga Saccharina latissima (former Laminaria saccharina) obtained from the Baltic Sea. The bacterium is a mesophilic, typical marine bacterium. It is a chemoheterotrophic aerobic bacterium with the potential of denitrification. Growth optima are at 25 °C, pH 5.5, and 3 % NaCl. The distinguished phylogenetic position separates Kiloniella from other alphaproteobacterial orders. The 16S rRNA gene sequence revealed a distant relationship to species of several orders of the Alphaproteobacteria with less than 91 % sequence similarity. This gives rise to the recognition of Kiloniella as a representative of a new order of the Alphaproteobacteria, the Kiloniellales. Phylogenetic analyses revealed a distinct cluster of Kiloniella with an uncharacterized bacterium (isolate KOPRI 13522) from hydrothermal plumes. This cluster forms a larger group together with the distantly related Terasakiella pusilla (88.4 % sequence similarity of the 16S rRNA gene) and the Thalassospira species (88.9–90.2 % sequence similarity). These genera are supposed to form separate families within the Kiloniellales.

Description: A multi-model analysis of Atlantic multidecadal variability is performed with the following aims: to investigate the similarities to observations; to assess the strength and relative importance of the different elements of the mechanism proposed by Delworth et al. (J Clim 6:1993–2011, 1993) (hereafter D93) among coupled general circulation models (CGCMs); and to relate model differences to mean systematic error. The analysis is performed with long control simulations from ten CGCMs, with lengths ranging between 500 and 3600 years. In most models the variations of sea surface temperature (SST) averaged over North Atlantic show considerable power on multidecadal time scales, but with different periodicity. The SST variations are largest in the mid-latitude region, consistent with the short instrumental record. Despite large differences in model configurations, we find quite some consistency among the models in terms of processes. In eight of the ten models the mid-latitude SST variations are significantly correlated with fluctuations in the Atlantic meridional overturning circulation (AMOC), suggesting a link to northward heat transport changes. Consistent with this link, the three models with the weakest AMOC have the largest cold SST bias in the North Atlantic. There is no linear relationship on decadal timescales between AMOC and North Atlantic Oscillation in the models. Analysis of the key elements of the D93 mechanisms revealed the following: Most models present strong evidence that high-latitude winter mixing precede AMOC changes. However, the regions of wintertime convection differ among models. In most models salinity-induced density anomalies in the convective region tend to lead AMOC, while temperature-induced density anomalies lead AMOC only in one model. However, analysis shows that salinity may play an overly important role in most models, because of cold temperature biases in their relevant convective regions. In most models subpolar gyre variations tend to lead AMOC changes, and this relation is strong in more than half of the models.

Description: Cold seeps on the Hikurangi Margin off New Zealand exhibit various seabed morphologies producing different intensity patterns in backscatter images. Acoustic backscatter characteristics of 25 investigated seep sites do not show a continuous range of patterns between two end members, but fall into four distinct types characterised by variations in backscatter intensity, distribution and inferred structural heights. The types reflect different carbonate morphologies including up to 20 m high structures (type 1), low-relief crusts (type 2), scattered blocks (type 3) and carbonate free sites (type 4). Each seep corresponds to a single type; ntermediates were not observed. Although the observed morphologies and backscatter patterns may have been caused by variations in sediment burial of seep carbonates or differential exhumation by erosion, they probably epresent varying onsets of authigenic carbonate precipitation. Precipitation of carbonate is episodic, which is likely the result of internal forcing. Blocking and subsequent reorganisation of the seep plumbing system lead to abandonment of old seeps and formation of new sites.

Description: Why a chapter on Perspectives and Integration in SOLAS Science in this book? SOLAS science by its nature deals with interactions that occur: across a wide spectrum of time and space scales, involve gases and particles, between the ocean and the atmosphere, across many disciplines including chemistry, biology, optics, physics, mathematics, computing, socio-economics and consequently interactions between many different scientists and across scientific generations. This chapter provides a guide through the remarkable diversity of cross-cutting approaches and tools in the gigantic puzzle of the SOLAS realm. Here we overview the existing prime components of atmospheric and oceanic observing systems, with the acquisition of ocean–atmosphere observables either from in situ or from satellites, the rich hierarchy of models to test our knowledge of Earth System functioning, and the tremendous efforts accomplished over the last decade within the COST Action 735 and SOLAS Integration project frameworks to understand, as best we can, the current physical and biogeochemical state of the atmosphere and ocean commons. A few SOLAS integrative studies illustrate the full meaning of interactions, paving the way for even tighter connections between thematic fields. Ultimately, SOLAS research will also develop with an enhanced consideration of societal demand while preserving fundamental research coherency. The exchange of energy, gases and particles across the air-sea interface is controlled by a variety of biological, chemical and physical processes that operate across broad spatial and temporal scales. These processes influence the composition, biogeochemical and chemical properties of both the oceanic and atmospheric boundary layers and ultimately shape the Earth system response to climate and environmental change, as detailed in the previous four chapters. In this cross-cutting chapter we present some of the SOLAS achievements over the last decade in terms of integration, upscaling observational information from process-oriented studies and expeditionary research with key tools such as remote sensing and modelling. Here we do not pretend to encompass the entire legacy of SOLAS efforts but rather offer a selective view of some of the major integrative SOLAS studies that combined available pieces of the immense jigsaw puzzle. These include, for instance, COST efforts to build up global climatologies of SOLAS relevant parameters such as dimethyl sulphide, interconnection between volcanic ash and ecosystem response in the eastern subarctic North Pacific, optimal strategy to derive basin-scale CO2 uptake with good precision, or significant reduction of the uncertainties in sea-salt aerosol source functions. Predicting the future trajectory of Earth’s climate and habitability is the main task ahead. Some possible routes for the SOLAS scientific community to reach this overarching goal conclude the chapter.

Description: The features of 30-60-day convection oscillations over the subtropical western North Pacific (WNP) were investigated, along with the degree of tropical-subtropical linkage between the oscillations over the WNP during summer 1998. It was found that 30-60-day oscillations were extremely strong in that summer over both the subtropical and tropical WNP, providing a unique opportunity to study the behavior of subtropical oscillations and their relationship to tropical oscillations. Further analyses indicated that 30-60-day oscillations propagate westwards over the subtropical WNP and reach eastern China. In addition, 30-60-day oscillations in the subtropics are affected by those over the South China Sea (SCS) and tropical WNP through two mechanisms: (1) direct propagation from the tropics into the subtropics; and (2) a seesaw pattern between the tropics and subtropics, with the latter being predominant

Description: Marine calcareous sediments provide a fundamental basis for paleoceanographic studies aiming to reconstruct past oceanic conditions and understand key biogeochemical element cycles. Calcifying unicellular phytoplankton (coccolithophores) are a major contributor to both carbon and calcium cycling by photosynthesis and the production of calcite (coccoliths) in the euphotic zone and the subsequent long-term deposition and burial into marine sediments. Here we present data from controlled laboratory experiments on four coccolithophore species and elucidate the relation between the divalent cation (Sr, Mg and Ca) partitioning in coccoliths and cellular physiology (growth, calcification and photosynthesis). Coccolithophores were cultured under different seawater temperature and carbonate chemistry conditions. The partition coefficient of strontium (DSr) was positively correlated with both carbon dioxide (pCO2) and temperature but displayed no coherent relation to particulate organic and inorganic carbon production rates. Furthermore, DSr correlated positively with cellular growth rates when driven by temperature but no correlation was present when changes in growth rates were pCO2-induced. The results demonstrate the complex interaction between environmental forcing and physiological control on the strontium partitioning in coccolithophore calcite. The partition coefficient of magnesium (DMg) displayed species-specific differences and elevated values under nutrient limitation. No conclusive correlation between coccolith DMg and temperature was observed but pCO2 induced a rising trend in coccolith DMg. Interestingly, the best correlation was found between coccolith DMg and chlorophyll a production suggesting that chlorophyll a and calcite associated Mg originate from the same intracellular pool. These results give an extended insight into the driving factors that lead to variations in the coccolith Mg / Ca ratio and can be used for Sr / Ca and Mg / Ca paleoproxy calibration.

Description: We report fossil coral records from the Seychelles comprising individual time slices of 14–20 sclerochronological years between 2 and 6.2 kyr BP to reconstruct changes in the seasonal cycle of western Indian Ocean sea surface temperature (SST) compared to the present (1990–2003). These reconstructions allowed us to link changes in the SST bimodality to orbital changes, which were causing a reorganization of the seasonal insolation pattern. Our results reveal the lowest seasonal SST range in the Mid-Holocene (6.2–5.2 kyr BP) and around 2 kyr BP, while the highest range is observed around 4.6 kyr BP and between 1990 and 2003. The season of maximum temperature shifts from austral spring (September to November) to austral autumn (March to May), following changes in seasonal insolation over the past 6 kyr. However, the changes in SST bimodality do not linearly follow the insolation seasonality. For example, the 5.2 and 6.2 kyr BP corals show only subtle SST differences in austral spring and autumn. We use paleoclimate simulations of a fully coupled atmosphere–ocean general circulation model to compare with proxy data for the Mid-Holocene around 6 kyr BP. The model results show that in the Mid-Holocene the austral winter and spring seasons in the western Indian Ocean were warmer while austral summer was cooler. This is qualitatively consistent with the coral data from 6.2 to 5.2 kyr BP, which shows a similar reduction in the seasonal amplitude compared to the present day. However, the pattern of the seasonal SST cycle in the model appears to follow the changes in insolation more directly than indicated by the corals. Our results highlight the importance of ocean–atmosphere interactions for Indian Ocean SST seasonality throughout the Holocene. In order to understand Holocene climate variability in the countries surrounding the Indian Ocean, we need a much more comprehensive analysis of seasonally resolved archives from the tropical Indian Ocean. Insolation data alone only provides an incomplete picture.

Description: Seasonal to interannual variations of the Equatorial Undercurrent (EUC) in the central Atlantic at 23°W are studied using shipboard observation taken during the period 1999-2011 as well as moored velocity time series covering the period May 2005-June 2011. The seasonal variations are dominated by an annual harmonic of the EUC transport and the EUC core depth (both at maximum during September), and a semiannual harmonic of the EUC core velocity (maximum during April and September). Substantial interannual variability during the period of moored observation included anomalous cold/warm equatorial Atlantic cold tongue events during 2005/2008. The easterly winds in the western equatorial Atlantic during boreal spring that represent the preconditioning of cold/warm events were strong/weak during 2005/2008 and associated with strong/weak boreal summer EUC transport. The anomalous year 2009 was instead associated with weak preconditioning and smallest EUC transport on record from January to July, but during August coldest SST anomalies in the eastern equatorial Atlantic were observed. The interannual variations of the EUC are discussed with respect to recently described variability of the tropical Atlantic Ocean.

Description: In a pilot study conducted in October and November 2011, air–sea gas transfer velocities of the two sparingly soluble trace gases hexafluorobenzene and 1,4-difluorobenzene were measured in the unique High-Speed Wind-Wave Tank at Kyoto University, Japan. This air–sea interaction facility is capable of producing hurricane strength wind speeds of up to u10=67 m s−1. This constitutes the first lab study of gas transfer at such high wind speeds. The measured transfer velocities k600 spanned two orders of magnitude, lying between 11 cm h−1 and 1180 cm h−1 with the latter being the highest ever measured wind induced gas transfer velocity. The measured gas transfer velocities are in agreement with the only available dataset at hurricane wind speeds (McNeil and D'Asaro, 2007). The disproportionately large increase of the transfer velocities found at highest wind speeds indicates a new regime of air–sea gas transfer, which is characterized by strong wave breaking, enhanced turbulence and bubble cloud entrainment. It was found that tracers spanning a wide range of solubilities and diffusivities are needed to separate the effects of enhanced surface area and turbulence due to breaking waves from the effects of bubble and spray mediated gas transfer.

Description: Mass deposition fluxes of mineral dust to the tropical northeast Atlantic Ocean were determined within this study. In the framework of SOPRAN (Surface Ocean Processes in the Anthropocene), the interaction between the atmosphere and the ocean in terms of material exchange were investigated at the Cape Verde atmospheric observatory (CVAO) on the island Sao Vicente for January 2009. Five different methods were applied to estimate the deposition flux, using different meteorological and physical measurements, remote sensing, and regional dust transport simulations. The set of observations comprises micrometeorological measurements with an ultra-sonic anemometer and profile measurements using 2-D anemometers at two different heights, and microphysical measurements of the size-resolved mass concentrations of mineral dust. In addition, the total mass concentration of mineral dust was derived from absorption photometer observations and passive sampling. The regional dust model COSMO-MUSCAT was used for simulations of dust emission and transport, including dry and wet deposition processes. This model was used as it describes the AOD's and mass concentrations realistic compared to the measurements and because it was run for the time period of the measurements. The four observation-based methods yield a monthly average deposition flux of mineral dust of 12–29 ng m−2 s−1. The simulation results come close to the upper range of the measurements with an average value of 47 ng m−2 s−1. It is shown that the mass deposition flux of mineral dust obtained by the combination of micrometeorological (ultra-sonic anemometer) and microphysical measurements (particle mass size distribution of mineral dust) is difficult to compare to modeled mass deposition fluxes when the mineral dust is inhomogeneously distributed over the investigated area.

Description: Enhanced permafrost warming and increased arctic river discharges have heightened concern about the input of terrigeneous matter into Arctic coastal waters. We used optical operational satellite data from the Ocean Colour sensor MERIS onboard the ENVISAT satellite mission for synoptic monitoring of the pathways of terrigeneous matter in the southern Laptev Sea. MERIS satellite data from 2006 on to 2011 were processed using the Case2Regional Processor, C2R, installed in the open-source software ESA BEAM-VISAT. Since optical remote sensing using Ocean Colour satellite data has seen little application in Siberian Arctic coastal and shelf waters, we assess the applicability of the calculated MERIS parameters with surface water sampling data from the Russian-German ship expeditions LENA2010 and TRANSDRIFT-XVII taking place in August and September 2010 in the southern Laptev Sea. The surface waters of the southern Laptev Sea are characterized by low transparencies, due to turbid river water input, terrestrial input by coastal erosion, resuspension events and, therefore, high background concentrations of Suspended Particulate Matter, SPM, and coloured Dissolved Organic Matter, cDOM. The mapped calculated optical water parameters, such as the first attenuation depth, Z90, the attenuation coefficient, k, and Suspended Particulate Matter, SPM, visualize resuspension events that occur in shallow coastal and shelf waters indicating vertical mixing events. The mapped optical water parameters also visualize that the hydrography of the Laptev Sea is dominated by frontal meanders with amplitudes up to 30 km and eddies and filaments with diameters up to 100 km that prevail throughout the ice-free season. The meander crests, filaments and eddy-like structures that become visible through the mapped MERIS C2R parameters indicate enhanced vertical and horizontal transport energy for the transport of terrigenous and living biological matter in the surface waters during the ice-free season.

Description: The volcano Cotopaxi in South America is 5,897 m high and is one of the highest active volcanoes of the world and the second highest volcano in the Andes after the Chimborazo (6,310 m). In Ecuador, there are more than 20 volcanoes contributing to the spectacular mountain range diving this country between the western and eastern lowlands. There have been more than 50 reports of volcanic activity at Cotopaxi since 1738, among which those from the years 1744, 1768, and 1877 are the largest. During the 1877 eruption, the whole summit glacier collapsed and a huge mudflow spread out for more than 100 km and flooded the city of Latacunga. Five years prior to this catastrophic event, the German geologist Wilhelm Reiss from the University of Heidelberg ascended Cotopaxi for the first time together with his supporter Angel M. Escobar from Columbia.

Description: Sea ice thickness information is important for sea ice modelling and ship operations. Here a method to detect the thickness of sea ice up to 50 cm during the freeze-up season based on high incidence angle observations of the Soil Moisture and Ocean Salinity (SMOS) satellite working at 1.4 GHz is suggested. By comparison of thermodynamic ice growth data with SMOS brightness temperatures, a high correlation to intensity and an anticorrelation to the difference between vertically and horizontally polarised brightness temperatures at incidence angles between 40 and 50° are found and used to develop an empirical retrieval algorithm sensitive to thin sea ice up to 50 cm thickness. The algorithm shows high correlation with ice thickness data from airborne measurements and reasonable ice thickness patterns for the Arctic freeze-up period.

Description: Accurate assessment of anthropogenic carbon dioxide (CO2) emissions and their redistribution among the atmosphere, ocean, and terrestrial biosphere is important to better understand the global carbon cycle, support the development of climate policies, and project future climate change. Here we describe data sets and a methodology to quantify all major components of the global carbon budget, including their uncertainties, based on the combination of a range of data, algorithms, statistics and model estimates and their interpretation by a broad scientific community. We discuss changes compared to previous estimates, consistency within and among components, alongside methodology and data limitations. CO2 emissions from fossil-fuel combustion and cement production (EFF) are based on energy statistics, while emissions from land-use change (ELUC), mainly deforestation, are based on combined evidence from land-cover change data, fire activity associated with deforestation, and models. The global atmospheric CO2 concentration is measured directly and its rate of growth (GATM) is computed from the annual changes in concentration. The mean ocean CO2 sink (SOCEAN) is based on observations from the 1990s, while the annual anomalies and trends are estimated with ocean models. The variability in SOCEAN is evaluated for the first time in this budget with data products based on surveys of ocean CO2 measurements. The global residual terrestrial CO2 sink (SLAND) is estimated by the difference of the other terms of the global carbon budget and compared to results of independent dynamic global vegetation models forced by observed climate, CO2 and land cover change (some including nitrogen–carbon interactions). All uncertainties are reported as ±1σ, reflecting the current capacity to characterise the annual estimates of each component of the global carbon budget. For the last decade available (2003–2012), EFF was 8.6 ± 0.4 GtC yr−1, ELUC 0.9 ± 0.5 GtC yr−1, GATM 4.3 ± 0.1 GtC yr−1, SOCEAN 2.5 ± 0.5 GtC yr−1, and SLAND 2.8 ± 0.8 GtC yr−1. For year 2012 alone, EFF grew to 9.7 ± 0.5 GtC yr−1, 2.2% above 2011, reflecting a continued growing trend in these emissions, GATM was 5.1 ± 0.2 GtC yr−1, SOCEAN was 2.9 ± 0.5 GtC yr−1, and assuming an ELUC of 1.0 ± 0.5 GtC yr−1 (based on the 2001–2010 average), SLAND was 2.7 ± 0.9 GtC yr−1. GATM was high in 2012 compared to the 2003–2012 average, almost entirely reflecting the high EFF. The global atmospheric CO2 concentration reached 392.52 ± 0.10 ppm averaged over 2012. We estimate that EFF will increase by 2.1% (1.1–3.1%) to 9.9 ± 0.5 GtC in 2013, 61% above emissions in 1990, based on projections of world gross domestic product and recent changes in the carbon intensity of the economy. With this projection, cumulative emissions of CO2 will reach about 535 ± 55 GtC for 1870–2013, about 70% from EFF (390 ± 20 GtC) and 30% from ELUC (145 ± 50 GtC). This paper also documents any changes in the methods and data sets used in this new carbon budget from previous budgets (Le Quéré et al., 2013). All observations presented here can be downloaded from the Carbon Dioxide Information Analysis Center (doi:10.3334/CDIAC/GCP_2013_V2.3).

Description: The neighbouring volcanoes Villarrica and Llaima are two of the most active volcanoes in Chile and both currently degas continuously. We present a semi-continuous time series of SO2 fluxes for Villarrica and Llaima volcanoes. The time series was obtained using five scanning Mini-Differential Optical Absorption Spectrometers (Mini-DOAS, UV spectrometers) over 6 months (13 February to 31 July 2010) and is based on 6,829 scans for Villarrica and 7,165 scans for Llaima. Statistical analyses of the SO2 flux time series reveal a periodicity of degassing maxima about every 7 days, and further a conspicuous synchronicity of the degassing maxima and minima between the two volcanoes. Intra-day variations in SO2 fluxes also show a striking correlation between Villarrica and Llaima. All these patterns correlate well with the trend of the modelled solid Earth tide curves, where the 7-day degassing maxima correspond with both the fortnightly tidal maxima and minima. The intra-day degassing peaks mostly correlate well with the periods of maximum deformation rates during the diurnal tidal cycle, and further with semidiurnal minima in atmospheric pressure, a phenomenon we refer to as “the tidal pump”. As there is little time lag between the tidal action and the changes in degassing rates, we infer that degassing at both volcanoes is controlled by conduit convection, involving physical separation between gas and magma at comparatively shallow levels. Variations in daily degassing rates were up to a factor of ca. 12 and 10 for Villarrica and Llaima, respectively, without any noticeable changes in the periodicity. We thus suggest that the described cyclic variations must be taken into account for all comparable volcanoes when using gas monitoring as a tool for volcanic hazard mitigation.

Description: We provide a time series of Agulhas leakage anomalies over the last 20-years from satellite altimetry. Until now, measuring the interannual variability of Indo-Atlantic exchange has been the major barrier in the investigation of the dynamics and large scale impact of Agulhas leakage. We compute the difference of transport between the Agulhas Current and Agulhas Return Current, which allows us to deduce Agulhas leakage. The main difficulty is to separate the Agulhas Return Current from the southern limb of the subtropical "supergyre" south of Africa. For this purpose, an algorithm that uses absolute dynamic topography data is developed. The algorithm is applied to a state-of-the-art ocean model. The comparison with a Lagrangian method to measure the leakage allows us to validate the new method. An important result is that it is possible to measure Agulhas leakage in this model using the velocity field along a section that crosses both the Agulhas Current and the Agulhas Return Current. In the model a good correlation is found between measuring leakage using the full depth velocities and using only the surface geostrophic velocities. This allows us to extend the method to along-track absolute dynamic topography from satellites. It is shown that the accuracy of the mean dynamic topography does not allow us to determine the mean leakage but that leakage anomalies can be accurately computed.

Description: Due to the unprecedented rate at which our climate is changing, the ultimate consequence for many species is likely to be either extinction or migration to an alternate habitat. Certain species might, however, evolve at a rate that could make them resilient to the effects of a rapidly changing environment. This scenario is most likely to apply to species that have large population sizes and rapid generation times, such that the genetic variation required for adaptive evolution can be readily supplied. Emiliania huxleyi (Lohm.) Hay and Mohler (Prymnesiophyceae) is likely to be such a species, as it is the most conspicuous extant calcareous phytoplankton species in our oceans with growth rates of 1 day−1. Here we report on a validated set of microsatellites, in conjunction with the coccolithophore morphology motif genetic marker, to genotype 93 clonal isolates collected from across the world. Of these, 52 came from a single bloom event in the North Sea collected on the D366 United Kingdom Ocean Acidification cruise in June–July 2011. There were 26 multilocus genotypes (MLGs) encountered only once in the North Sea bloom and 8 MLGs encountered twice or up to six times. Each of these repeated MLGs exhibited Psex values of less than 0.05, indicating each repeated MLG was the product of asexual reproduction and not separate meiotic events. In addition, we show that the two most polymorphic microsatellite loci, EHMS37 and P01E05, are reporting on regions likely undergoing rapid genetic drift during asexual reproduction. Despite the small sample size, there were many more repeated genotypes than previously reported for other bloom-forming phytoplankton species, including a previously genotyped E. huxleyi bloom event. This study challenges the current assumption that sexual reproduction predominates during bloom events. Whilst genetic diversity is high amongst extant populations of E. huxleyi, the root cause for this diversity and ultimate fate of these populations still requires further examination. Nonetheless, we show that certain CMM genotypes are found everywhere, while others appear to have a regional bias.

Description: In this study we report diapycnal diffusive fluxes of dissolved iron (dFe), dissolved aluminium (dAl) and the major macronutrients to the surface waters of the North Atlantic subpolar gyre. Turbulent diffusivities at the base of the summer mixed layer ranged from 0.01 to 0.5 (median 0.07) cm2 s−1 and daily macronutrient fluxes into the surface mixed layer typically represented 〈 0.5% of integrated mixed layer inventories, although fluxes were highly variable. Elevated nutrient fluxes of up to 4% of mixed layer inventories were identified on the Greenland Shelf, where integrated nutrient pools were lowest due to localised shoaling of the mixed layer. Diffusive fluxes of dFe and dAl were typically 〈0.1% of mixed layer inventories but were also highly variable between stations. Approximations of daily phytoplankton nutrient and Fe uptake indicate that the diffusive flux may at best represent 〈10% of phytoplankton macronutrient uptake, and only 1% of daily phytoplankton Fe uptake. The daily turbulent diffusive flux of dFe was comparable in magnitude to coincident estimates of aeolian Fe supply but despite shallower than normal convective mixing in winter 2010 the diffusive supply was 22 and 59 times smaller than the annual convective supply of Fe to the Irminger and Iceland basins respectively. The general picture obtained from this study is one of small magnitude diffusive nutrient and Fe fluxes to the subpolar North Atlantic during the period of annual nutrient minima and indicates that the diffusive supply mechanism is unlikely to alleviate the recently identified presence of seasonal iron limitation within the North Atlantic subpolar gyre; a condition exacerbated by low dFe:NO3− ratios in subsurface source waters.

Description: This study investigates the global warming response of the Walker Circulation and the other zonal circulation cells (represented by the zonal stream function), in CMIP3 and CMIP5 climate models. The changes in the mean state are presented as well as the changes in the modes of variability. The mean zonal circulation weakens in the multi model ensembles nearly everywhere along the equator under both the RCP4.5 and SRES A1B scenarios. Over the Pacific the Walker Circulation also shows a significant eastward shift. These changes in the mean circulation are very similar to the leading mode of interannual variability in the tropical zonal circulation cells, which is dominated by El Niño Southern Oscillation variability. During an El Niño event the circulation weakens and the rising branch over the Maritime Continent shifts to the east in comparison to neutral conditions (vice versa for a La Niña event). Two-thirds of the global warming forced trend of the Walker Circulation can be explained by a long-term trend in this interannual variability pattern, i.e. a shift towards more El Niño-like conditions in the multi-model mean under global warming. Further, interannual variability in the zonal circulation exhibits an asymmetry between El Niño and La Niña events. El Niño anomalies are located more to the east compared with La Niña anomalies. Consistent with this asymmetry we find a shift to the east of the dominant mode of variability of zonal stream function under global warming. All these results vary among the individual models, but the multi model ensembles of CMIP3 and CMIP5 show in nearly all aspects very similar results, which underline the robustness of these results. The observed data (ERA Interim reanalysis) from 1979 to 2012 shows a westward shift and strengthening of the Walker Circulation. This is opposite to what the results in the CMIP models reveal. However, 75 % of the trend of the Walker Circulation can again be explained by a shift of the dominant mode of variability, but here towards more La Niña-like conditions. Thus in both climate change projections and observations the long-term trends of the Walker Circulation seem to follow to a large part the pre-existing dominant mode of internal variability.

Description: Lycoteuthis lorigera is among the most abundant mesopelagic squid on the continental slope of the south Atlantic. It is the dominant prey in some commercially harvested groundfish. Despite its abundance and importance in the mesopelagic foodweb, its general biology is poorly known. In this study, the spawning pattern and fecundity of L. lorigera from southern African waters were investigated. Both histological examination and length frequency analysis of ovaries in various stages of development revealed that the ovulation pattern of L. lorigera is asynchronous, which indicates a spawning strategy where batches of eggs are spawned repeatedly over time. More specifically, ovulation is group synchronous, where distinct batches of 1,200–2,400 eggs ripen in the ovary and accumulate in the oviducts. The potential fecundity was estimated to be 20,000–50,000 in immature females (n = 6) and 8,000–25,000 in mature females (n = 21). The number of ripe eggs in the oviducts suggests that batches of spawned egg masses contain between 1,000 and 4,000 eggs. The reproductive strategy of L. lorigera is discussed and compared to the reproductive strategies of oceanic squid inhabiting the continental slope of southern Africa.

Description: Calcifying foraminifera are expected to be endangered by ocean acidification, However, the response of a complete community kept in natural sediment and over multiple generations under controlled laboratory conditions has not been constrained to date. During 5 six month incubation, foraminiferal assemblages were treated with pCO2 enriched seawater of 430, 907, 1865 and 3247 μatm pCO2. The fauna was dominated by Ammonia aomoriensis and Elphidium species, whereas agglutinated species were rare. After 6 months incubation, pore water alkalinity was much higher in comparison to the overlying seawater. Consequently, the saturation state of Òcalc was much higher in the sedi10 ment than in the water column in all pCO2 treatments and remained close to saturation. As a result, the life cycle of living assemblages was largely unaffected by the tested pCO2 treatments. Growth rates, reproduction and mortality, and therefore population densities and size-frequency distribution of Ammonia aomoriensis varied markedly during the experimental period. Growth rates varied between 25 and 50 μm per month, 15 which corresponds to an addition of 1 or 2 new chambers per month. According to the size-frequency distribution, foraminifera start reproduction at a diameter of 250 μm. Mortality of large foraminifera was recognized, commencing at a test size of 285 μm at a pCO2 ranging from 430 to 1865 μatm, and of 258 μm at 3247 μatm. The total organic content of living Ammonia aomoriensis has been determined to be 4.3% of dry 20 weight. Living individuals had a calcium carbonate production rate of 0.47 gm−2 yr−1, whereas dead empty tests accumulated at a rate of 0.27 gm−2a−1. Although Òcalc was close to 1, some empty tests of Ammonia aomoriensis showed dissolution features at the end of incubation. In contrast, tests of the subdominant species, Elphidium incertum, stayed intact. This species specific response could be explained by differences in 25 the elemental test composition, in particular the higher Mg-concentrations in Ammonia aomoriensis tests. Our results emphasize that the sensitivity to ocean acidification of endobenthic foraminifera in their natural sediment habitat is much lower compared to the experimental response of specimens isolated from the sediment.

Description: Mt. Etna is the largest and one of the best-studied volcanoes in Europe. It represents a highly active basaltic volcano on top of the active Apennine thrust belt. The instability of its eastern flank has been described as an important preconditioning factor for the occurrence of submarine mass wasting events. In order to better understand the processes that may cause submarine slope failures, a new dataset including seismic, hydroacoustic and core data was collected during RV Meteor cruise M86/2 from December 2011 to January 2012. Seismic profiles and sediment cores reveal repeated mass transport deposits (MTD), indicating a long history of landslides in the working area. Some of the sampled MTDs and their surrounding strata contain volcaniclastic debris, indicating that slope failures may be controlled by volcanic and non-volcanic processes. Several tephra layers directly cover MTDs, which is regarded as an indicator for the possibility that several flank failures occur immediately before or very early during an eruption.

Description: In 1996, after 150 years of relative calm, Turrialba Volcano was reawakening. A visible plume and serious damage to surrounding vegetation due to acid rain are the most obvious signals. As part of the Network for Observation of Volcanic and Atmospheric Change project, four gas-monitoring stations were initially installed on the west flank of the volcano with the purpose of measuring sulphur dioxide emissions during this period of increased activity using the scanning-differential optical absorption spectroscopy technique. We present here the results of semicontinuous gas flux measurements over a period of 5 years (from 2008 to 2012), providing a novel data set that documents a relatively rapid increase in SO2 fluxes from around 350 t day−1 to around 4,000 t day−1 leading up to an eruptive period, followed by a gradual return to the former baseline values. Gas flux data were also compared with seismic data for selected periods of interest, providing insights into the link between degassing and seismicity. The most important result from this comparison is the identification of an inflexion point in the gas emissions followed by a clearly increasing trend in seismic activity, distinguishable 6 months prior to a phreatic eruptive event that occurred on 5 January 2010. This signal can be interpreted as a possible indicator of future eruptive events. Monitoring of SO2 thus complements seismic monitoring as a forecasting tool for eruptive events. Such monitoring is critical considering the proximity of Turrialba to the Central Valley, an area inhabited by more than 50 % of Costa Rica’s population.

Description: A general pattern in water mass distribution and potential shelf–basin exchange is revealed at the Laptev Sea continental slope based on hydrochemical and stable oxygen isotope data from the summers 2005–2009. Despite considerable interannual variations, a frontal system can be inferred between shelf, continental slope and central Eurasian Basin waters in the upper 100 m of the water column along the continental slope. Net sea-ice melt is consistently found at the continental slope. However, the sea-ice meltwater signal is independent from the local retreat of the ice cover and appears to be advected from upwind locations. In addition to the along-slope frontal system at the continental shelf break, a strong gradient is identified on the Laptev Sea shelf between 122° E and 126° E with an eastward increase of riverine and sea-ice related brine water contents. These waters cross the shelf break at ~ 140° E and feed the low-salinity halocline water (LSHW, salinity S 〈 33) in the upper 50 m of the water column. High silicate concentrations in Laptev Sea bottom waters may lead to speculation about a link to the local silicate maximum found within the salinity range of ~ 33 to 34.5, typical for the Lower Halocline Water (LHW) at the continental slope. However brine signatures and nutrient ratios from the central Laptev Sea differ from those observed at the continental slope. Thus a significant contribution of Laptev Sea bottom waters to the LHW at the continental slope can be excluded. The silicate maximum within the LHW at the continental slope may be formed locally or at the outer Laptev Sea shelf. Similar to the advection of the sea-ice melt signal along the Laptev Sea continental slope, the nutrient signal at 50–70 m water depth within the LHW might also be fed by advection parallel to the slope. Thus, our analyses suggest that advective processes from upstream locations play a significant role in the halocline formation in the northern Laptev Sea.

Description: Ash layers from explosive volcanic eruptions (i.e. tephra) represent isochronous surfaces independent from the environment in which they are deposited and the distance from their source. In comparison to eastern Beringia (non-glaciated Yukon and Alaska), few Plio-Pleistocene distal tephra are known from western Beringia (non-glaciated arctic and subarctic eastern Russia), hindering the dating and correlation of sediments beyond the limit of radiocarbon and luminescence methods. The identification of eight visible tephra layers (T0–T7) in sediment cores extracted from Lake El'gygytgyn, in the Far East Russian Arctic, indicates the feasibility of developing a tephrostratigraphic framework for this region. These tephra range in age from ca. 45 ka to 2.2 Ma, and each is described and characterized by its major-, minor-, trace-element and Pb isotope composition. These data show that subduction zone related volcanism from the Kurile–Kamchatka–Aleutian–Arc and Alaska Peninsula is the most likely source, with Pb isotope data indicating a Kamchatkan volcanic source for tephra layers T0–T5 and T7, while a source in the Aleutian Arc is possible probable for Tephra T6. The location of Lake El'gygytgyn relative to potential source volcanoes (〉1000 km) suggests these tephra are distributed over a vast area. These deposits provide a unique opportunity to correlate the high-resolution paleoenvironmental records of Lake El'gygytgyn to other terrestrial paleoenvironmental archives from western Beringia and marine records from the northwest Pacific and Bering Sea. This is an important first step towards the development of a robust integrated framework between the continuous paleoclimatic records of Lake El'gygytgyn and other terrestrial and marine records in NE Eurasia.

Description: Under modern conditions only North Pacific Intermediate Water is formed in the Northwest Pacific Ocean. This situation might have changed in the past. Recent studies with General Circulation Models indicate a switch to deep-water formation in the Northwest Pacific during Heinrich Stadial 1 (17.5–15.0 kyr) of the last glacial termination. Reconstructions of past ventilation changes based on paleoceanographic proxy records are still insufficient to test whether a deglacial mode of deep-water formation in the North Pacific Ocean existed. Here we present deglacial ventilation records based on radiocarbon-derived ventilation ages in combination with epibenthic stable carbon isotopes from the Northwest Pacific including the Okhotsk Sea and Bering Sea, the two potential source regions for past North Pacific ventilation changes. Evidence for most rigorous ventilation of the mid-depth North Pacific occurred during Heinrich Stadial 1 and the Younger Dryas, simultaneous to significant reductions in Atlantic Meridional Overturning Circulation. Concurrent changes in δ13C and ventilation ages point to the Okhotsk Sea as driver of millennial-scale changes in North Pacific Intermediate Water ventilation during the last deglaciation. Our records additionally indicate that changes in the δ13C intermediate water (700–1750 m water depth) signature and radiocarbon-derived ventilation ages are in antiphase to those of the deep North Pacific Ocean (〉2100 m water depth) during the last glacial termination. Thus, intermediate and deep-water masses of the Northwest Pacific have a differing ventilation history during the last deglaciation.

Description: The global ocean–climate system has been highly sensitive to the formation and advection of deep overflow water from the Nordic Seas as integral part of the Atlantic Meridional Overturning Circulation (AMOC) but its evolution over the Pliocene–Pleistocene global cooling is not fully understood. In particular, changes in the sources and mixing of prevailing deep waters that were involved in driving overturning throughout the Pliocene–Pleistocene climate transitions are not well constrained. Here we investigate the evolution of a substantial deep southward return overflow of the AMOC over the last 4 million years. We present new records of the bottom-water radiogenic neodymium isotope (ϵNd) variability obtained from three sediment cores (DSDP site 610 and ODP sites 980/981 and 900) at water depths between 2170 and 5050 m in the northeast Atlantic. We find that prior to the onset of major Northern Hemisphere glaciation (NHG) ∼3 million years ago (Ma), ϵNd values primarily oscillated between −9 and −11 at all sites, consistent with enhanced vertical mixing and weak stratification of the water masses during the warmer-than-today Pliocene period. From 2.7 Ma to ∼2.0 Ma, the ϵNd signatures of the water masses gradually became more distinct, which documents a significant advection of Nordic Seas overflow deep water coincident with the intensification of NHG. Most markedly, however, at ∼1.6 Ma the interglacial ϵNd signatures at sites 610 (2420 m water depth (w.d.)) and 980/981 (2170 m w.d.) synchronously and permanently shifted by 2 to 3 ϵNd units to less radiogenic values, respectively. Since then the difference between glacial and interglacial ϵNd values has been similar to the Late Quaternary at each site. A decrease of ∼2ϵNd units at 1.6 Ma was also recorded for the deepest water masses by site 900 (∼5050 m w.d.), which thereafter, however, evolved to more radiogenic values again until the present. This major ϵNd change across the 1.6 Ma transition reflects a significant reorganization of the overturning circulation in the northeast Atlantic paving the way for the more stratified water column with distinct water masses prevailing thereafter.

Description: X-ray absorption near edge structure (XANES) studies on calcium phosphate species (Ca-P) deal with marginal differences among subtle spectral features despite a hitherto missing systematic breakdown of these differences. Related fingerprinting approaches depend therefore on spectral libraries that are not validated against each other, incomplete and scattered among publications. This study compiled a comprehensive spectral library from published reference compound libraries in order to establish more clear-cut criteria for Ca-P determination by distinctive phosphorus K-edge XANES features. A specifically developed normalization method identified diagnostic spectral features within the compiled library, e.g. by uniform calculation of ratios between white-line and secondary peak heights. Post-processing of the spectra (n = 81) verified distinguishability among most but not all phases, which included hydroxylapatite (HAP), poorly crystalline HAP, amorphous HAP, fluorapatite, carbonate fluorapatite (CFAP), carbonate hydroxylapatite, β-tricalcium phosphate, octacalcium phosphate (OCP), brushite, monetite, monocalcium phosphate, amorphous calcium phosphate (ACP), anapaite, herderite, scholzite, messelite, whiteite and P on CaCO3. Particularly, peak height ratios significantly improved analyte specificity, e.g. by supplementary breakdown into OCP and ACP. The spectral analysis also revealed Ca-P standards that were rarely investigated or inappropriately synthesized, and thus provides a basis for standard selection and synthesis. The developed method and resulting breakdown by species were subsequently tested on Ca-P spectra from studies on bone and sediment. The test indicated that bone material likely comprises only poorly crystalline apatite, which implies direct nucleation of apatite in bone. This biological apatite formation is likely opposed to that of sedimentary apatite, which apparently forms by successive crystallization. Application of the method to μXANES spectra of sediment particles indicated authigenic apatite formation by an OCP precursor.