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  • 1
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    The @journal of eukaryotic microbiology 49 (2002), S. 0 
    ISSN: 1550-7408
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: . Microtubule dynamics in Paramecium caudatum were investigated with an anti-α-tubulin antibody and a microinjection technique to determine the function of microtubules on micronuclear behavior during conjugation. After meiosis, all four haploid micronuclei were connected by microtubular filaments to the paroral region and moved close to this region. This nuclear movement was micronucleus-specific, because some small macronuclear fragments transplanted from exconjugants never moved to the region. Only one of the four germ nuclei moved into the paroral cone and was covered by microtubule assembly (the so-called first assembly of microtubules, AM-I). This nucleus survived there, while the other three not in this region degenerated. The movement of germ nucleus was inhibited by the injection of the anti-α-tubulin antibody. The surviving germ nucleus divided once and produced a migratory pronucleus and a stationary pronucleus. Prior to the reciprocal exchange of the migratory nuclei, microtubules assembled around the migratory pronuclei again (the so-called second assembly of microtubules, AM-II). Then, the migratory pronucleus moved into the partner cell and fused with the stationary pronucleus. Thus, microtubules appear to be indispensable for nuclear behavior: they enable migration of postmeiotic nuclei to the paroral region and they permit the survival of the nucleus at the paroral cone.
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  • 2
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    The @journal of eukaryotic microbiology 49 (2002), S. 0 
    ISSN: 1550-7408
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
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  • 3
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    The @journal of eukaryotic microbiology 49 (2002), S. 0 
    ISSN: 1550-7408
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
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  • 4
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    The @journal of eukaryotic microbiology 49 (2002), S. 0 
    ISSN: 1550-7408
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: . This work reports the characterization of an arginine kinase in the unicellular parasitic flagellate Trypanosoma brucei, the etiological agent of human sleeping sickness and Nagana in livestock. The arginine kinase activity, detected in the soluble fraction obtained from procyclic forms, had a specific activity similar to that observed in Trypanosoma cruzi, about 0.2 μmol min−1mg−1. Western blot analysis of T. brucei extracts revealed two bands of 40 and 45 kDa. The putative gene sequence of this enzyme had an open reading frame for a 356-amino acid polypeptide, one less than the equivalent enzyme of T. cruzi. The deduced amino acid sequence has an 82% identity with the arginine kinase of T. cruzi, and highest amino acid identities of both trypanosomatids sequences, about 70%, were with arginine kinases from the phylum Arthropoda. In addition, the amino acid sequence possesses the five arginine residues critical for interaction with ATP as well as two glutamic acids and one cysteine required for arginine binding. The finding in trypanosomatids of a new phosphagen biosynthetic pathway, which is not present in mammalian host tissues, suggests this enzyme as a possible target for chemotherapy.
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  • 5
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. This paper compares nitrate leaching losses from organic farms, which depended on legumes for their nitrogen inputs (66 site years) with those from conventional farms using fertilizers under similar cropping and climatic conditions (188 site years). The conventional farms were within Nitrate Sensitive Areas in England, but sites following special practices associated with that scheme were excluded. Nitrate losses during the organic ley phase (including the winter of ploughing out) were similar (45 kg N ha–1) to those from conventional long-term grass receiving fertilizer N inputs of less than 200 kg N ha–1 (44 kg N ha–1) and from the grass phase of conventional ley-arable rotations (50 kg N ha–1). Losses from conventional grass receiving higher N inputs were greater than from organic or less intensive grass. Nitrate losses following arable crops averaged 47 and 58 kg N ha–1 for the organic and conventional systems respectively, with part of the difference being due to the greater proportion of non-cereal break crops in the latter. Thus under similar cropping, losses from organic systems are similar to or slightly smaller than those from conventional farms following best practice.
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  • 6
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    Oxford, UK : Blackwell Publishing Ltd
    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. In the Sahel, promising technologies for agricultural intensification include millet stover mulching and ridging. A four year on-farm experiment was set-up in order to assess the effect of various combinations of these two technologies on crop development and yield in a millet (Pennisetum glaucum (L.) R. Br.) - cowpea (Vigna unguiculata (L.) Walp.) intercropping system. Treatments included bare surface, ridging, a surface applied banded millet stover mulch (2 t ha–1) and a banded millet stover mulch (2 t ha–1) buried in ridges. The latter three treatments were implemented exclusively in the cowpea rows, with an annual rotation between the millet and cowpea rows. On bare and ridged plots, millet yields fell below 100 kg grain ha–1 after the first year. This was ascribed mainly to soil acidification and loss of soil organic matter rather than to soil physical constraints or water availability despite extensive surface crusting and high soil penetration resistance and bulk density. Compared to the bare plots, ridging increased cowpea hay production by 330% over the four years which was attributed to lower soil penetration resistance and bulk density but also to a reduction of 0.15 cmol+ kg–1 exchangeable acidity in the ridges. Except during the severe drought year of 1997, millet grain yield in the banded mulch treatment remained fairly stable over time at 526 ± 9 kg ha–1. However, a detailed analysis revealed yield compensation mechanisms between various yield components depending on the timing of occurrence of the abiotic stresses. Cowpea productivity was always higher in buried banded mulch plots than in surface applied banded mulch plots but the former treatment appeared unable to sustain millet yields. This decline was attributed to a greater nutrient uptake by cowpea and more rapid acidification in the buried mulch treatment compared to the banded mulch treatment.
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  • 7
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    Oxford, UK : Blackwell Publishing Ltd
    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Nutrient balance calculations have been advocated as indicators of the risk of nitrate loss from agricultural land. To explore this concept, a spatially distributed UK agricultural nitrogen balance was derived using annually updated statistics. The mean UK N surplus for 1995 was 115 kg N ha–1, made up of 51 kg ha–1for arable land, 140 kg ha–1 for agricultural grassland (excluding rough grazing) and an additional 14 kg N ha–1for agricultural land from pig and poultry units. Nitrogen surpluses were greater in lowland grassland (mainly in western, wetter areas) than in arable areas. However nitrate concentrations in rivers were generally greater in arable areas. The relationship between N balance and nitrate leaching was very different for grassland and arable systems, and was also sensitive to climate, level of inputs and management practices. Nitrogen surplus was therefore weakly or even negatively correlated with river nitrate concentrations or loads. A positive correlation was found only where the comparison was restricted to grassland-dominated catchments. Nitrogen surplus calculations identified areas of very high livestock densities, which would be associated with increased risk of pollution. However their use in isolation as indicators of N leaching, or of progress towards mitigation, could be misleading especially if comparing areas differing in land use, climate or soil type.
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  • 8
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Dynamic simulation models are increasingly used in environmental and agricultural science. Here we present a method that allows models to be used to determine optimum timing of sampling for field trials. The model is used to decide when to concentrate sampling effort before the field trial begins. The model chosen to design sampling strategy should include an appropriately sensitive description of all processes that influence measurements significantly. The simulation is run, using predicted weather data, to generate the full time series before the trial begins. Every point in the simulation is considered initially to be a potential sampling point. The potential error due to not including a measurement at each point is calculated using the ‘dot-to-dot’ method of b10Smith et al. (2002) by omitting simulated values consecutively. The calculated potential error provides a measure of the priority that should be given to sampling at each point. Where the error introduced by omitting the simulated value exceeds an acceptable error, the value at the last discernible time step should be measured so that all statistically significant changes in the system can be observed. The output from the calculation is a plan of sampling times needed to capture all statistically significant events that are likely to occur over the course of the trial.
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  • 9
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    Oxford, UK : Blackwell Publishing Ltd
    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. In grazed dairy pasture systems, a major source of NO3– leached and N2O emitted is the N returned in the urine from the grazing animal. The objective of this study was to use lysimeters to measure directly the effectiveness of a nitrification inhibitor, dicyandiamide (DCD), in decreasing NO3– leaching and N2O emissions from urine patches in a grazed dairy pasture under irrigation. The soil was a free-draining Lismore stony silt loam (Udic Haplustept loamy skeletal) and the pasture was a mixture of perennial ryegrass (Lolium perenne) and white clover (Trifolium repens). The use of DCD decreased NO3–-N leaching by 76% for the urine N applied in the autumn, and by 42% for urine N applied in the spring, giving an annual average reduction of 59%. This would reduce the NO3–-N leaching loss in a grazed paddock from 118 to 46 kg N ha–1 yr–1. The NO3–-N concentration in the drainage water would be reduced accordingly from 19.7 to 7.7 mg N L–1, with the latter being below the drinking water guideline of 11.3 mg N L–1. Total N2O emissions following two urine applications were reduced from 46 kg N2O-N ha–1 without DCD to 8.5 kg N2O-N with DCD, representing an 82% reduction. In addition to the environmental benefits, the use of DCD also increased herbage production by more than 30%, from 11 to 15 t ha–1 yr–1. The use of DCD therefore has the potential to make dairy farming more environmentally sustainable by reducing NO3– leaching and N2O emissions.
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  • 10
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    Oxford, UK : Blackwell Publishing Ltd
    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
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  • 11
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    Oxford, UK : Blackwell Publishing Ltd
    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
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  • 12
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    Oxford, UK : Blackwell Publishing Ltd
    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. This paper describes a study of 37 farms in the Batinah region of Oman where fodder crops and date palms are grown using saline irrigation water. Soil water salinities (εs) range from 2 to 50 dS m–1. Soil water salinity depends on irrigation water quality and management factors such as the amount and frequency of irrigation and the area of the irrigation basin relative to the vegetation canopy. An irrigation management model for soil salinity control IMAGE has been developed, based on the salt balance of the profile assuming that the εs is in equilibrium with the irrigation water. The input parameters required to run the model include the annual water application, irrigation interval, soil textural class, potential evaporation, the ratio of crop canopy to irrigation basin area and the salinity of irrigation water. Verification of the model using rather uncertain data from a survey of the farms showed that this simple approach predicted εs to within 2.5 dS m–1 in 82% of cases. The model showed that εs was highly sensitive to the size of irrigation basin and the amount and scheduling of irrigation, and so provides a tool for optimizing salinity management.
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  • 13
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    Oxford, UK : Blackwell Publishing Ltd
    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. There is increasing evidence that phosphorus (P) can be transferred to surface waters by leaching as well as by erosion and surface runoff. Recently it has been suggested that P soluble in 0.01 m CaCl2 may be a good indicator of the specific Olsen-P concentration (usually termed the ‘Change Point’) at which the rate of P leaching from soil suddenly increases and poses a greater threat of eutrophication to standing waters. We know that these ‘Change Points’ vary from soil to soil but, so far, we do not fully understand the mechanism(s) involved. Here, we combine methods for assessing isotopically exchangeable P and P sequential fractionation to gain an insight into the processes which cause this sudden increase in P solubilization. We suggest that Change-Points simply define the asymtote of rapid desorption isotherms relating to that P which is most readily isotopically exchangeable (i.e at 24 h –33P24) with the soil solution. This involves ligand exchange at hydroxyl sites associated with Fe and Al cations, which is kinetically governed by the concentration of surface complexes on soil minerals. Individual Change-Points reflect the mineralogy and surface chemistry of different soil types. Laboratory and field measurements of the Olsen-P Change-Point reflect these surface phenomena and are similar. Olsen-P extracts the portion of the exchangeable pool that most readily controls solution P, and the Olsen-P/33P24 ratio is linearly related to Olsen-P Change-Points. This may provide a method for estimating P Change-Points where gradients of soil P are not available.
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  • 14
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    Oxford, UK : Blackwell Publishing Ltd
    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Soil removed on sugarbeet (Beta vulgaris L.) at harvest may be an important factor in soil degradation causing significant decline in soil productivity. This study evaluated soil losses on sugarbeet and estimated the cost of plant nutrients lost by this process. The losses were calculated using data from the agricultural reports published by the General Directorate of the Turkish Sugar Industry. Organic matter and plant available nutrient contents of soils removed from sugarbeet fields were determined. It was estimated that approximately 30 000 t of soil is lost annually in Erzurum, and 1.2 million t in the whole of Turkey. The cost of N, P and K losses is approximately 60 000 US$ annually for the study area.
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  • 15
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    Oxford, UK : Blackwell Publishing Ltd
    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Inputs and outputs of sulphur (S) were quantified over a three year period using field lysimeters containing undisturbed 60 cm deep soil monoliths of a sandy loam. There were four treatments, including a control (no S) and three forms of sulphur fertilizers: ammonium sulphate (AS); micronized elemental sulphur (MS0); and bentonite clay and elemental sulphur mixture (BS0). Sulphur was applied at the beginning of the experiment in autumn at 50 kg ha–1. Atmospheric deposition varied between 6.7 and 7.8 kg S ha–1 yr–1. Leaching losses of S ranged from 35 kg ha–1 in the control to 83 kg ha–1 in the AS treatment over three years, with dissolved organic S accounting for 6–10% of the S leached. In the first year, 7, 26 and 72% of the applied S was lost to drainage water in the BS0, MS0 and AS treatments, respectively, and the percentages increased to 33, 75 and 96% by the end of year 3. No significant differences in sulphur uptake by herbage were found in any of the harvests except a significant increase in the BS0 treatment in the second cut of the second year. Over three years, total S outputs exceeded total S inputs in all treatments, with the control and the AS treatments showing a larger S deficit (34–35 kg ha–1) than the MS0 (23 kg ha–1) and BS0 (7 kg ha–1) treatments. The deficits indicate a depletion of soil S, probably through net mineralization of organic S. The results confirm that sulphate was highly mobile and prone to leaching under the experimental conditions, whereas the slow release characteristics of elemental S, particularly BS0, led to smaller leaching losses and larger residual values.
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  • 16
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    Oxford, UK : Blackwell Publishing Ltd
    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Nitrate and Man: Toxic, harmless or beneficial? By J. L ‘Hirondel and J-L L ‘Hirondel.
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  • 17
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    Oxford, UK : Blackwell Publishing Ltd
    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. In general, agricultural management has focused on differences between fields or on the gross differences within them. Recent developments in agricultural technology, yield mapping, Global Positioning Systems and variable rate applications, have made it possible to consider managing the considerable variation in soil and other properties within fields. This system is known as precision agriculture. More precise management of fields depends on a better understanding of the factors that affect crop input decisions. This paper examines the spatial variation in crop yield, soil nutrient status and soil pH within two agricultural fields using geostatistics. The observed properties vary considerably within each field. The relation between yield and the measured soil properties appears to be weak in general. However, the range of spatial correlation for yield, shown by the variogram, is similar to that of the soil chemical properties. In addition the latter changed little over two years. This suggests that information on the scale of variation of soil chemical properties can be derived from yield maps, which can also be used as a guide to a suitable sampling interval for soil properties.
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  • 18
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    Oxford, UK : Blackwell Publishing Ltd
    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. This study employed both natural and social sciences to examine the relationship between resources and economic development in the Red Soil Zone along the coast of South China. Based on the data collected by field investigation and laboratory analysis as well as from literature sources, the authors discuss the environmental problems and the main factors influencing them by using the case of Guangdong province. The results indicate that there are three important problems of Red Soil utilization: soil degradation and pollution, soil erosion and geological hazards. The main reasons for these problems involve the physical and chemical characteristics and mineral composition of the soil, climate and meteorological changes and human activities. The latter is currently the dominant factor influencing the change and deterioration of the Red Soils.
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  • 19
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. The dual porosity soil water and contaminant transport model MACRO was tested for its suitability to represent water flows and leaching of phosphorus (P) through field drains following spreading of slurry. These flows are characterized by very high loadings of P, including a high proportion in colloidally attached form, for about one week following winter spreading of slurry, followed by quite a rapid decline to the low background level. Use was made of the option in MACRO for representing colloid facilitated contaminant transport. The model simulates transport through macropores and soil matrix pores (micropores) of contaminant carrying colloids, as well as trapping of colloids by straining and filtration using an adaptation of standard filtration equations. Calibration involved selecting soil hydraulic parameters, colloid filtration coefficients and P sorption characteristics for two soils from measured and literature values. Both P in solution and P attached to colloids were represented in simulated outputs. Reasonable agreement was found between simulated and measured water and leached P flows. Work with the model suggests that macropore flow through the soil to field drains of colloidally transported P is an important component of water pollution associated with slurry spreading
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  • 20
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    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Rising atmospheric CO2 concentrations and their association with global climate change have led to several major international initiatives to reduce net CO2 emissions, including the promotion of bioenergy crops such as short rotation coppice (SRC) willow. Although the above-ground harvested bio-fuel is likely to be the major contributor to the CO2 mitigation potential of bioenergy crops, additional carbon may be sequestered through crop inputs into plantation soils.  Here, we describe a process-based model specifically designed to evaluate the potential for soil carbon sequestration in SRC willow plantations in the UK. According to the model predictions, we conclude that the potential for soil carbon sequestration in these plantations is comparable to, or even greater than, that of naturally regenerating woodland. Our preliminary, site-specific model output suggests that soil carbon sequestration may constitute about 5% of the overall carbon mitigation benefit arising from SRC plantations. Sensitivity analyses identified the following factors as the principal controls on rates and amounts of soil carbon sequestration under SRC: carbon inputs (net primary production), decomposition rates of the major soil carbon pools, initial soil carbon content (an inverse relationship with rates of soil carbon sequestration), crop/plantation management, and depth of soil being influenced by the bioenergy crop. Our results suggest that carbon sequestration potential is greatest in soils whose carbon content has been depleted to relatively low levels due to agricultural land use practices such as annual deep ploughing of agricultural soils.
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  • 21
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Leaching of phosphorus (P) from agricultural land is the major cause of eutrophication of surface waters in Northern Ireland. However, soil testing using the Olsen method has shown that while soil P in some catchment areas of the Province is low, surface waters within these catchments are, nonetheless, every bit as eutrophic as other local catchments where soil P is high. Soil P measurements on over 6000 samples from Northern Ireland soils (A horizon only) have indicated that Olsen-P values of improved grassland on most parent materials are linearly related to animal intensification. Exceptions are soils derived from peat, marl and basalt. For each of the latter soils, the measured Olsen-P was shown to be around 10 mg L–1 lower than expected for farms with similar intensification on other parent materials. In particular, the mean Olsen-P values of samples from basaltic soils under grass with total Fe above 62 g kg–1 and total Mg above 16 g kg–1 were significantly lower than those from basaltic soils with low total Fe (〈37 g kg–1) and total Mg (〈8 g kg–1). As a result of the depressed Olsen-P value, excessive quantities of P may be applied to these soils to maintain a recommended soil P index thereby enhancing the potential for nutrient enrichment of adjacent surface waters. In such cases, coworkers have shown that acid ammonium oxalate may be a better extractant than bicarbonate as an indicator of plant-available P.
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  • 22
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    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. This paper reviews current understanding of soil structure, the role of soil organic matter (SOM) in soil structure and evidence for or against better soil physical condition under organic farming. It also includes new data from farm case studies in the UK. Young SOM is especially important for soil structural development, improving ephemeral stability through fungal hyphae, extracellular polysaccharides, etc. Thus, to achieve aggregate stability and the advantages that this conveys, frequent input of fresh organic matter is required. Practices that add organic material are routinely a feature of organically farmed soils and the literature generally shows that, comparing like with like, organic farms had at least as good and sometimes better soil structure than conventionally managed farms. Our case studies confirmed this. In the reviewed papers, SOM was generally larger on the biodynamic/organic farms because of the organic additions and/or leys in the rotation. We can therefore hypothesize that, because it is especially the light fraction of SOM that is involved in soil structural development, soil structure will improve in a soil to which fresh organic residues are added regularly. Thus, we argue it is not the farming system per se that is important in promoting better physical condition, but the amount and quality of organic matter returned to a soil.
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  • 23
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    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Soil fertility is defined as the ability of a soil to provide the conditions required for plant growth. It is a result of the physical, chemical and biological processes that act together to provide nutrients, water, aeration and stability to the plant, as well as freedom from any substances that may inhibit growth. Within this definition, it is useful to distinguish between those components of fertility which change relatively slowly, perhaps over the course of a rotation, or in some cases, decades, and the more immediate contribution from materials such as fertilizers and manures. The term ‘inherent fertility’ is used to describe these more stable characteristics, while recognising that they are, to a large extent, products of soil management. We conclude that, although nutrient management in organically managed soils is fundamentally different to soils managed conventionally, the underlying processes supporting soil fertility are not. The same nutrient cycling processes operate in organically farmed soils as those that are farmed conventionally although their relative importance and rates may differ. Nutrient pools in organically farmed soils are also essentially the same as in conventionally managed soils but, in the absence of regular fertilizer inputs, nutrient reserves in less-available pools will be of greater significance.
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  • 24
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    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. In an exploratory study land use in 27 catchments covering most of England and Wales was assessed (using the land use classification devised by the then Institute of Terrestrial Ecology, now a part of the Centre for Ecology and Hydrology) and related to loads and concentrations of total nitrogen, phosphorus (mainly as orthophosphate (Op)) and some pesticides in river flows reaching the surrounding seas in the years 1990–1993. There are good correlations between seven land use types and the concentrations of total nitrogen (r=0.83) and Op (r=0.73) entering the seas. The correlations for individual land use types are best for arable land: total nitrogen, r=0.77; Op, r=0.65; and are positive. However, except for the mixed arable and grassland, the relationships between the other five land use types (improved grassland, upland grassland, upland moorland, upland mixed, and afforested and upland) and contaminant concentrations are negative. If data from the Mersey catchment are discarded, on the grounds that contaminant concentrations in the river seem unduly high, correlations between land use and contaminant concentrations reaching the seas are improved for all land uses: total nitrogen, r=0.89; Op, r=0.83; and atrazine, r=0.78. Loads and concentrations of pollutants in rivers entering the sea could be used to validate models of losses from catchments. Models may need to take greater account of runoff and transport of soil particles than they do presently.
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  • 25
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    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Uptake in grass crops of ammonium acetate lactate extractable K (KAL) and reserve K (interlayer K + structural K) in soil was studied in 16 field experiments at different locations on a range of mineral soil types in Norway. The K uptake from soil, both from KAL and reserve K, was considerable, often even at the highest level of K fertilizer. During three years, only on the sandy soils with a low level of acid soluble K (KHNO3 minus KAL) was there a yield response to K fertilization. The KAL values declined rapidly and flattened off at a ‘minimum level’ which differed with soil type. This minimum level for KAL is a useful parameter in fertilizer planning, because the grass usually took up the K in excess of the minimum level over two years. The minimum value of KAL was significantly correlated with the content of clay + silt in soil. The decrease in KAL during the growing season was closely correlated to the KAL value in spring minus the minimum value and, therefore, the amount of K supplied to the grass from the KAL fraction can be calculated. Furthermore, the KAL value for the following spring may be estimated. The release from reserve K was partially related to acid soluble K.
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  • 26
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    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Soil organic carbon and total nitrogen stocks are presented for Central and Eastern Europe. The study uses the soil geographic and attribute data held in a 1:2 500 000 scale Soil and Terrain (SOTER) database, covering Belarus, Bulgaria, Czech Republic, Estonia, Hungary, Latvia, Lithuania, Moldova, Poland, Romania, the Russian Federation (west of the Urals), Slovakia, and Ukraine. Means and coefficients of variation for soil organic carbon and total nitrogen are presented for each major FAO soil grouping. The mean content of organic carbon, to a depth of 1 m, ranges from 3.9 kg C m–2 for coarse textured Arenosols to 72.9 kg C m–2 for poorly drained Histosols. Mean carbon content for the mineral soils, excluding Arenosols, is 15.8 kg C m–2. The top 1 m of soil holds 110 Pg C (Pg=1015 g), which corresponds to about 7% of the global stock of soil organic carbon. About 44% of this carbon pool is held in the top 0.3 m of the soil, the layer that is most prone to be changed by changes in soil use and management. About 166 million ha in Central and Eastern Europe have been degraded by compaction, erosion of topsoil, fertility decline and crusting. The achievable level of carbon sequestration for these soils, upon adoption of ‘best’ management practices or restorative measures, is estimated.
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  • 27
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    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. There is a lack of information about the influence of tillage and time of sowing on N2O and NO emission in cereal production. Both factors influence crop growth and soil conditions and thereby can affect trace gas emissions from soils. We measured fluxes of NO and N2O in a tillage experiment where grassland on clay loam soil was converted to arable by either direct drilling or ploughing to 30 cm depth. We made measurements in spring for 20 days after fertilizer application to spring-sown and to winter-sown barley. Both were the second barley crop after grass. Direct drilling enhanced N2O emission primarily as a result of restricted gas diffusivity causing poor aeration after rainfall. Deep ploughing enhanced NO emission, because of the large air-filled porosity in the topsoil. NO and N2O emissions were smaller from winter sown crops than from spring sown crops.  The three rates of N fertilizer application (40, 80 or 120 kg N ha–1) did not produce the expected linear response in either soil available N concentrations or in NO and N2O fluxes. We attributed this to the lack of rainfall in the ten-day period after fertilizer application and therefore very slow incorporation and movement of fertilizer into and through the soil.
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  • 28
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    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Preferential flow may enhance phosphorus transport through the soil profile and thereby increase the risks for eutrophication of watercourses. Destruction of continuous macropores in topsoil by tillage provides the possibility for better contact between soil particles and P fertilizer. This is facilitated by incorporation rather than surface application of fertilizer, which should reduce the risk of rapid P transport from the soil surface through the unsaturated zone. To test this hypothesis, undisturbed soil monoliths (0.295 m in diameter and 1.2 m in length) were collected at a field site with a clay soil in which preferential flow is the dominant solute transport mechanism. After three years of observation, average total P loads reached 1.86, 1.59 and 1.25 kg ha–1for no-tillage, conventional tillage, and conventional tillage where the P fertilizer was incorporated, respectively. More than 80% of total losses were in the form of dissolved P. The tillage treatment had no significant effect on P leaching loads compared to no-tillage, but the improved contact between soil particles and P fertilizer resulting from fertilizer incorporation significantly reduced P loads during the first year after application of 100 kg P ha–1. However, after further application of 100 kg P ha–1 two years later, there were no significant differences between the treatments.
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  • 29
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    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. The effect of land use on the water retention capacity of Umbric Andosols in south Ecuador was studied. The objective was to acquire a better insight into the hydrological processes of the ecosystem and the role of the soil, in order to assess the impact of changing soil properties due to land use change on the hydrology of the high Andes region. Field data on the water retention capacity at wilting point of Umbric Andosols were collected for both cultivated field conditions and original bush vegetation. The pH in water and in NaF, texture, organic matter content and dry bulk density were measured to show which physicochemical soil characteristics are responsible for the water retention of the Umbric Andosols and for the irreversible loss in water retention due to air drying. Organic matter content appears to be very important and certainly more important than allophane clay content. Water retention of the organic litter layer was calculated to be 16 mm, this would be lost when vegetation was cleared and the land cultivated.
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  • 30
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    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. The effects of time and temperature on the changes in Olsen P after phosphate application were studied in 13 calcareous soils from Pakistan, an Oxisol from Colombia and an Inceptisol from England. The phosphate sorption reactions were monitored in two stages. The short-term reaction (30 min shaking with added phosphate in the presence of the Olsen bicarbonate solution) showed that over this time the nature of the sorbing material and number of available sites for P adsorption were important but temperature was not. The extent of the short-term sorption was not related to the amount of calcium carbonate. In the long-term reaction (incubating the soils with phosphate at 10, 25 and 45 °C for one year) the amount of Olsen P decreased with time following a power relationship. Increased temperature increased the rate of reaction, following the Arrhenius principle i.e. Q10⊃ 3 (activation energy 83 kJ mol–1). The effects of time and temperature were well described by a modified power equation Y=a (1 +fTt)-b, where Y is the amount of Olsen P extracted after time t, a is the Olsen P value after the short-term reaction (the initial value), fT is the ratio of the rate constants at any two temperatures and b is a coefficient which represents the loss in extractability with time. On the basis of the initial Olsen P values and subsequent Olsen P values at different times and temperatures a unified decay curve Y/a= (1 +t)–0.20 was developed where the initial Olsen P values are normalized to 1. The parameters of this equation allow, with limitations, the prediction of changes in Olsen P in these soils if the initial Olsen P value of the soil is known.
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  • 31
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. This study investigated the effect of the same volume of leaching water applied consecutively in either equal amounts or increasing amounts or decreasing amounts on the hydraulic conductivity of a saline sodic soil in 30 cm plastic columns in the laboratory. Gypsum was mixed with the surface 2–3 cm of soil. After leaching, the hydraulic conductivity was measured in each 10 cm depth of soil. Hydraulic conductivity decreased strongly (P〈0.05) with depth and the most effective method of applying the water was in gradually increasing amounts.
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  • 32
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. The field experiment tested the effects of three management systems on nitrate leaching losses from a five crop rotation on the Lincolnshire Limestone in Eastern England. The Standard system was similar to farming practice in the area. The Protective system integrated individual practices which were expected to decrease nitrate losses (e.g. cover crops, cultivation delay in autumn and reduced intensity, manipulation of drilling dates and, during the first few years of the first rotation, straw incorporation). The Intermediate system was a compromise between the two extremes. All crops were grown at full and half recommended nitrogen rates. This paper reports data from the second full rotation (years 6–10), thus enabling the medium-term effects of continued management practices to be investigated. Average annual nitrogen leaching losses at 49, 35 and 25 kg N ha–1 for Standard, Intermediate and Protective systems, respectively, were significantly different. The respective flow-weighted average NO3 concentrations were 167, 131 and 96 mg l–1. Thus, adopting nitrate retentive practices through the rotation was able to substantially decrease losses. The Protective system was as effective as in the first full rotation, demonstrating that 10 years of such practices had not failed in the medium-term. However, continued minimal cultivation caused serious problems of weed build-up. The cost of weed control and yield loss caused by grass weeds made cereal production uneconomic in some years. Thus, rules for nitrate leaching control need to be tempered with practical and agronomic considerations. Also, few (if any) management techniques tested guaranteed that nitrate losses would be small in all years, as the interaction with winter weather, particularly rainfall, was of vital importance.
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  • 33
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    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. A field plot experiment was conducted to investigate P mobilization from fertilized rice fields during rainfall-flooding events. The experiment tested the effects of inorganic fertilizer P, at two rates, and P fertilizer plus manure, at one rate, on the amounts of P lost in drainage water when the plots were subjected to four artificially simulated storm-flooding/drainage events over an eight day period. During the first drainage event, two days after P application, the concentrations and loads of soluble reactive P (SRP) and particulate P (PP) in the drainage water were some three to five times lower than they had been just 24 hours earlier due to rapid sorption and sedimentation. At subsequent events, the concentrations and loads of SRP in drainage water were almost two orders of magnitude lower than at the first event, i.e. the equilibrium between P release from fertilizer and manure and P sorption/fixation by the soil mineral fraction had shifted strongly in favour of the latter processes. During the first drainage event, the concentrations and loads of SRP in drainage water from the low P fertilizer treatment were similar to those on the low P fertilizer plus manure treatment, whereas, 24 hours earlier they had been significantly greater. At subsequent events, though, the highest concentrations and loads of SRP occurred in drainage water from plots treated with equal amounts of P fertilizer and manure. It is suggested that extending the time period between P application and flooding events by applying fertilizer and manure outside the main rainy season should significantly reduce the risk of P loss from paddy rice fields.
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  • 34
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Natural secondary succession, forest planting and agricultural practices after deforestation affect soil properties in many ways. During the last 50 years, land uses have greatly changed in the mountainous areas in southwestern China as the result of deforestation and cultivation. A study was initiated in Wolong Nature Reserve, Sichuan province to elucidate the complex relationships in a humid mountainous region. Soil properties under six typical land use types (natural forest, grassland, shrub, secondary forest, cultivated land and reforested land) were compared. Significant differences between land uses were found for soil bulk density (BD), total nitrogen (TN), soil organic carbon (SOC), available phosphorus (AP) and available potassium (AK). Cultivated land had the lowest levels for most soil properties compared to other land uses and shrubland had a higher SOC, TN and available nitrogen (AN) than other land uses. Soils under grassland and shrub contained the greatest carbon mass (TC). Further studies on reforested land indicated that soil properties could be changed by length of reforestation. The SOC and TN in particular showed a linear relationship with years since reforestation. The results suggested that in an area of China where the climate favours secondary succession, ‘leave nature as it is’ is a better choice than the policy ‘change farmland to forest land ‘, especially for the mountainous regions where there is lack of labour and financial support.
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  • 35
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    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Soil erosion and sediment delivery cause many environmental problems posing a substantial financial burden upon society. Policy makers therefore look for a strategy to minimize their impact. The spatial nature of soil erosion and sediment delivery, as well as the variety of possible soil conservation and sediment control measures, requires an integrated approach to catchment management. To evaluate such management, a spatially distributed soil erosion and sediment delivery model is necessary. Such a model (WaTEM/SEDEM) was applied to three agricultural catchments in Flanders (Belgium). The model was first used to identify where the measures to control soil loss should be taken. Secondly, a scenario analysis was used to select the most effective set of techniques. The findings showed that soil conservation measures taken in fields are not only effective in reducing on-site soil loss, but also in drastically reducing sediment yield. Off-site sediment control measures appear to be much less effective in reducing sediment yield than previously thought. The results also suggest that data from field experiments cannot be extrapolated to a catchment scale.
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  • 36
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. When over exploited and coupled with climatic conditions, tropical soils are subject to increased erosion and a loss of soil organic matter. Countermeasures include the incorporation of organic materials such as crop and animal residues. We studied the effect of adding crop residues and manure to soil, at five sites in Ethiopia, on carbohydrate properties, aggregate stability and the C and N distribution within water-stable aggregates. The effects of organic amendments varied between sites. The largest content of carbohydrates was obtained in the control treatment at Holeta, Ginchi (90 kg ha–1 mustard meal), Jimma (5 t ha–1 cow dung + 9 t ha–1 coffee husk), Awassa (forested soil), and Sirinka (soil alley-cropped with Leuceanae). The aggregate stability of these soils was highly correlated with the OM content but not with carbohydrates. The smaller aggregates (〈1.00 mm) accumulated more carbohydrates than the larger (〉1.00 mm), thereby suggesting a protecting effect within the finer soil fractions. A protecting role played by humified OM components was also indicated by the C and N distribution as well as the C:N ratios which showed preferential accumulation in small rather than in large aggregates. The isotopic 13C-OC values of carbohydrate extracts were generally low, suggesting that OM was from plants with C3 photosynthetic pathways. Soil treatments with maize alone or combined with coffee husks at Jimma decreased the δ13C‰ values slightly, revealing that maize contributed a share of the labile OM. Despite the improvement in the soil OM content, neither the carbohydrate content nor the aggregate stability were increased to the level of the forested sites, suggesting that the additions of crop residues and manure were not alone sufficient to restore the soil physical quality.
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    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. This paper reviews information from the literature and case studies to investigate whether productivity in organic systems is restricted by the supply of available N during the major phases of crop growth. Organic systems have the potential to supply adequate amounts of available N to meet crop demand through the incorporation of leys, N rich cash crop residues and uncomposted manures. However, this is seldom achieved because leys are only incorporated once every few years and organically produced crop residues and manures tend to have low N contents and slow mineralization rates. N availability could be improved by delaying ley incorporation until spring, applying uncomposted manures at the start of spring growth, transferring some manure applications from the ley phase to arable crops, preventing cover crops from reaching a wide C:N ratio and better matching crop type with the dynamics of N availability.
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  • 38
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    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Previous studies of the microbial status of soils managed under ‘organic’ and ‘conventional’ regimes have produced conflicting evidence of whether there are distinct differences in the size, composition and activity of the soil microbial biomass which may be attributed to management practice. In the present study, we have compared the microbiology of organically- and conventionally-managed soils at (primarily) two farms in England, over a two year period. Differences in microbial communities in soils under different management practice were subtle rather than dramatic. Many of the parameters measured, including total C and microbial biomass C, often showed no consistently significant differences in soils under different management. In soils from one farm, concentrations of ATP in Ringers solution soil extracts were mostly found to be significantly greater in organically-managed than in comparable conventionally-managed soils. While indirect (plate) counts showed that there were similar numbers of cultivable microorganisms present in these soils, total counts of bacteria (via DAPI-staining) were found to parallel the trends found for readily-extractable ATP. Numbers of metabolically-active bacteria, determined by FISH analysis using a EUB338 probe to detect ribosome-rich cells, indicated that the percentage of metabolically-active bacteria present was not determined by management practice. Total and active fungi were also found to be more abundant in organically-managed soils. It was concluded that changes in soil microbiology may occur as a consequence of switching to organic land management, but these may not be detectable by methods used frequently to assess soil biomass. In particular, increased numbers of viable but non-culturable bacteria and fungi in organically-managed soils points to a greater physiological diversity of microorganisms in such situations.
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  • 39
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    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Under a UK Government consultation procedure announced in 2001, it was proposed that measures agreed within already designated Nitrate Vulnerable Zones (NVZ ‘s) would be extended to include a considerably increased area of England, Wales and Scotland. Since existing NVZ ‘s in the UK have included relatively little grassland, it is important to examine how nitrate losses from grassland areas, especially from animal manures, one of the major potential sources of nitrate loss, can be minimized. Experiments were carried out on freely draining grassland soils at four sites (Devon, Hampshire, Shropshire and N Yorkshire) representative of a wide range of climatic and farming conditions across lowland England, over a four year period, 1990/91 to 1993/94. Slurry was applied to experimental plots over a range of times (including June and then monthly, from September to January) at a target rate of 200 kg N ha–1. Nitrogen leaching over the four years ranged from 0 to 〉50% of applied slurry N, with the largest losses occurring following applications in the September to November period. The use of a nitrification inhibitor with slurry applied in November failed to provide consistent reduction in nitrate leaching.A strategy to reduce the risk of N leaching from manures applied to freely draining grassland soils must take account of the characteristics of the manure, in particular its N content, the application rate and the amount of excess rainfall following application. The experimental results suggest that slurry applications to freely draining grassland, in September, October and November should generally be avoided, the rationale for this being dependent on the amount of excess rainfall subsequent to application. Farmyard manure represents a lower risk and does not justify the restrictions on application timing that appear to be necessary with slurry.
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  • 40
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    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. A numerical model that incorporates the spatial variability of infiltration, surface storage and resistance to overland flow was developed, calibrated and validated for olive orchards. The model reproduced accurately amounts of runoff used in validation, and predicted runoff in olive orchards managed in different ways, in line with published results. The model was used to analyse the runoff generation in a virtual, 180 m length, 5% steep, olive grove, using 54 different scenarios which combined three different soil types, two tree canopy sizes and nine soil management techniques (four tillage scenarios: freshly or degraded tillage with and without a compacted plough layer; no-till, and four cover crops in strips differing in width and plant density). The results of the numerical experiment showed that no-till had the highest runoff coefficient, while a dense cover crop had the lowest. Recently tilled soils also exhibited some of the lowest runoff coefficients. The effects of increasing soil cover due to a greater tree canopy on runoff were significant and caused by the greater area of high infiltration beneath the canopy. Effects of tree canopy size were less important than the impact of soil management practices on runoff.
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  • 41
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    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. In the Sahel, promising technologies for agricultural intensification include millet stover mulching and ridging. A four year on-farm experiment was set-up in order to assess the effect of various combinations of these two technologies on soil chemical and physical quality in a millet (Pennisetum glaucum (L.) R. Br.) –- cowpea (Vigna unguiculata (L.) Walp.) relay intercropping system. Treatments included bare surface, ridging, a surface applied banded millet stover mulch (2 t ha–1) and a banded millet stover mulch (2 t ha–1) buried in ridges. The latter three treatments were implemented exclusively in the cowpea rows, with an annual rotation between the millet and cowpea rows. Both the bare and ridge plots experienced a rapid loss of organic carbon, acidification and the development of extensive surface crusts but no increase in bulk density or penetration resistance. In the year of application, mulching improved soil quality in the cowpea row with respect to pH, organic carbon and exchangeable K+ and Mg++ content, penetration resistance and bulk density, and it reduced the decline in exchangeable Ca++ and total N content. In the year following mulch application, a general decline in soil chemical quality was observed in the millet row, except for organic carbon content, and a positive residual effect was observed on penetration resistance and bulk density. As a rule, the effects of mulching in the year of application tended to be stronger in the ridged treatment with buried residue than in the banded surface mulch. In the year following application, this tendency was reversed. For the purpose of reducing soil degradation by nutrient mining and wind erosion, a banded surface mulch therefore appeared more effective than buried mulch.
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  • 42
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Slurry from farm animals may contaminate water supplies, rivers and bathing waters with faecal coliforms, such as Escherichia coli. Where animals harbour the O157 strain the hazard to human health is particularly high, but both the hazard level, and the low incidence and sporadic nature of the excretion of E. coli O157 make it difficult to study this strain under field conditions. The survival of total E. coli and of E. coli O157 were compared in the laboratory for two soils under controlled temperature and moisture. E. coli O157 die-off rate was the same as or quicker than for total E. coli. This result meant that field experiments studying the fate of total E. coli should give a satisfactory evaluation of the risk of water contamination by the O157 strain. In four field experiments at three sites, slurry containing total E. coli numbers of 2.2 × 104 to 5.7 × 105 colony forming units per mL (c.f.u. mL–1) was applied to drained field plots. Field die-off was faster than expected from laboratory experiments, especially in one experiment where two weeks dry weather followed application. In all but this experiment, the first drain flow events after slurry application led to very high E. coli concentrations in the drains (103 to 104 c.f.u. mL–1). E. coli O157 was present in the slurry used for two of the experiments (33 c.f.u. per 100 mL in each case). However the proportion of E.coli O157 was very low (about 1 in 105) and it was not detected in the drainage water. After the first week E. coli drainage water numbers decreased rapidly but they were 1–10 c.f.u. mL–1 for much of the sampling period after slurry application (1–3 months).
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    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Predictive, regional use of soil organic matter (SOM) models requires evaluation of the performance of models with datasets from long-term experiments relevant to the scenarios of interest to the regional scale study, and relevant to the climate of the study region. Datasets from six long-term experiments were used to evaluate the performance of RothC and CENTURY, two of the most widely used and tested SOM models. Three types of model run were completed for each site: (1) CENTURY model alone; (2) RothC model run to fit measured SOC values, by iteratively adjusting C inputs to soil; and (3) RothC model run using C inputs derived from CENTURY runs. In general, the performance of both models was good across all datasets. The runs using RothC (iteratively changing C inputs to fit measured SOC values) tended to have the best fit to model data, since this method involved direct fitting to observed data. Carbon inputs estimated by RothC were, in general, lower than those estimated by CENTURY, since SOC in CENTURY tends to turn over faster than SOC in RothC. The runs using RothC with CENTURY C inputs tended to have the poorest fit of all, since CENTURY predicted greater C inputs than were required by RothC to maintain the same SOC content. A plausible model fit to measured SOC data may be obtained with widely differing C input values, due to differences in predicted decomposition rates between models. It remains unclear which, if either, modelling approach most closely represents reality since both C inputs to soil and decomposition rates for bulk SOM are difficult to determine experimentally. Further progress in SOM modelling can only be the result of research leading to better process understanding, both of net C inputs to soil and of SOM decomposition rates.  The use of default methods for estimating initial SOC pools in RothC and CENTURY may not always be appropriate and may require adjustment for specific sites. The simulations presented here also suggest details of SOC dynamics not shown by available measured data, especially trends between sampling intervals, and this emphasizes the importance of archived soil samples in long-term experiments.
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  • 44
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    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Efforts to assess the role of soil structure in soil and water processes have been limited by data based on two dimensional geometry or disturbed samples. Computed tomography (CT) is a non-invasive technique that allows for the three dimensional, non-destructive examination of heterogeneous materials. X-ray CT scanning was used to acquire serial images of contrasting soil types that could be used to render, and hence, quantify important soil constituents in three dimensions. By repeating the scanning techniques after an infiltration period, it was also possible to examine the nature of water movement in real time. Macropore architecture between different soil types was highly variable and generally appeared as unconnected pore segments at the resolution examined. As expected, water flow characteristics were similar to macropore structure, with wetting patterns resembling both Darcian and preferential flow identified in different soils. From this, it was found that in the sandy clay soil c. 90% of macropore space was active following infiltration, compared with c. 50% for the sandy loam soil. In addition, it was possible to visualize the three dimensional distribution of stones and other mineral material. The results illustrated the benefits of computed tomography over more conventional analyses of soil structure, and its potential as a tool for examining dynamic soil processes. However, problems associated with accessibility, resolution and artefacts still provide limitations of the technique.
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  • 45
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    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Continuous cultivation of soils of the semiarid tropics has led to significant land degradation. Soil erosion and nutrient loss caused by high runoff volumes have reduced crop yields and contributed to offsite damage. We compared a number of soil management practices (tillage, mulch and perennial/annual rotational based systems) for their potential to improve crop production and land resource protection in an Alfisol of the semiarid tropics of India. Runoff and soil erosion were monitored and surface soil and sediment were analysed for nitrogen and carbon to determine enrichment ratios. Amelioration of soils with organic additions (farmyard manure, rice straw) or rotating perennial pasture with annual crops increased soil carbon and nitrogen contents and reduced runoff, soil erosion and nutrient loss. Soil erosion totalled less than 7 t ha–1, but enrichment ratios were often greater than 2 resulting in up to 27 kg N ha–1 and 178 kg C ha–1 being lost in sediment. Up to an extra 250 mm of water per year infiltrated the soil with organic additions and was available for crop water use or percolation to groundwater. The results show that there are good opportunities for reducing degradation and increasing productivity on farms.
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  • 46
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    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Native woodland restoration is a conservation priority within the UK and there is an increasing awareness that a long-term strategy is required to guide this process. A GIS-based modelling approach has been developed, which links site conditions as expressed in an integrated soil and land cover dataset with the site requirements for different woodland types. There are three important aspects to the model – the parameter weightings, the added value of the integrated dataset, and the woodland categories which are described and predicted. The initial quantitative and qualitative validation has been encouraging although more is required and planned. The results indicate that for broad strategic planning purposes, predictions of woodland potential are not improved significantly when climatic factors are incorporated. The concept that soil acts as an integrator of other environmental variables is discussed alongside the practical application of the model by a range of users.
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  • 47
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    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Spate irrigation is a system used for wetting land prior to planting. Use is made of seasonal rivers (wadis) producing flash floods in the uplands, which are directed by structures to irrigate fields in the lowlands. A land suitability system for spate irrigation schemes in Eritrea was studied in the Sheeb area of Eritrea with and without land improvements. The availability of floods and soil moisture were the major land use requirements for spate-irrigated sorghum and maize, while salinity hazard has only a minor effect in spate irrigation systems. The suitable land for spate irrigation in the Sheeb area is distributed as follows: 16% is highly to moderately suitable, 24% is moderately suitable and 17% is marginally suitable. About 40% of the study area was found to be currently unsuitable for spate irrigation mainly due to a lack of floodwater and poor soils. With improvements to the spate irrigation system, such as construction of permanent flood diversion structures, the area of land suitable for spate irrigation will expand. The land suitability system presented in this study could be applied in other spate irrigation schemes of Eritrea and perhaps in other countries also.
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  • 48
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    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Forest soil sustainability and future crop productivity is at risk if mechanised harvesting operations cause soil damage. In UK upland forestry, soil protection is usually provided by placing harvesting residues (brash) over areas where machinery traffic is required. In this study, various thicknesses of brash mat were tested for their ability to reduce compaction of a surface water gley soil at Kielder Forest, Northumberland. Changes in penetration resistance and dry soil bulk density were studied after passes by forest harvesting and timber extraction machinery running on the brash. The study shows that normal harvesting operations caused some soil compaction. However, the brash mat system was shown as important in protecting the soil. Soil under brash mats experienced some compaction to at least 45 cm depth. The thickest brash mat, composed of residues from 10 rows of trees, was unable to prevent compaction completely. Nevertheless, the protective role of the brash mat system was clearly confirmed when compared to timber extraction over bare soil. The point at which compaction has a detrimental effect on the establishment and stability of future tree rotations remains uncertain.
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  • 49
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    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Agricultural soils are important sources of the tropospheric ozone precursor NO and the greenhouse gas N2O. Emissions are controlled primarily by parameters that vary the soil mineral N supply, temperature and soil aeration. In this field experiment, the importance of soil physical properties on emissions of NO and N2O are identified. Fluxes were measured from 13 soils which belonged to 11 different soil series, ranging from poorly drained silty clay loams to freely drained sandy loams. All soils were under the same soil management regime and crop type (winter barley) and in the same maritime climate zone. Despite this, emissions of NO and N2O ranged over two orders of magnitude on all three measurement occasions, in spring before and after fertilizer application, and in autumn after harvest. NO emissions ranged from 0.3 to 215 μg NO-N m–2 h–1, with maximum emissions always from the most sandy, freely drained soil. Nitrous oxide emissions ranged from 0 to 193 μg N2O-N m–2 h–1. Seasonal shifts in soil aeration caused maximum N2O emissions to switch from freely drained sandy soils in spring to imperfectly drained soils with high clay contents in autumn. Although effects of soil type on emissions were not consistent, N2O emission was best related to a combination of bulk density and clay content and the NO/N2O ratio decreased logarithmically with increasing water filled pore space.
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  • 50
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    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Complex relationships exist between different components of the organic farm and the quantity and quality of the end products depend on the functioning of the whole system. As such, it is very difficult to isolate soil fertility from production and environmental aspects of the system. Crop rotation is the central tool that integrates the maintenance and development of soil fertility with different aspects of crop and livestock production in organic systems. Nutrient supply to crops depends on the use of legumes to add nitrogen to the system and limited inputs of supplementary nutrients, added in acceptable forms. Manures and crop residues are carefully managed to recycle nutrients around the farm. Management of soil organic matter, primarily through the use of short-term leys, helps ensure good soil structure and biological activity, important for nutrient supply, health and productivity of both crops and livestock. Carefully planned diverse rotations help reduce the incidence of pests and diseases and allow for cultural methods of weed control. As a result of the complex interactions between different system components, fertility management in organic farming relies on a long-term integrated approach rather than the more short-term very targeted solutions common in conventional agriculture.
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  • 51
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. On organic farms, where the importation of materials to build/maintain soil fertility is restricted, it is important that a balance between inputs and outputs of nutrients is achieved to ensure both short-term productivity and long-term sustainability. This paper considers different approaches to nutrient budgeting on organic farms and evaluates the sources of bias in the measurements and/or estimates of the nutrient inputs and outputs. The paper collates 88 nutrient budgets compiled at the farm scale in nine temperate countries. All the nitrogen (N) budgets showed an N surplus (average 83.2 kg N ha–1 yr–1). The efficiency of N use, defined as outputs/inputs, was highest (0.9) and lowest (0.2) in arable and beef systems respectively. The phosphorus (P) and potassium (K) budgets showed both surpluses and deficits (average 3.6 kg P ha–1 yr–1, 14.2 kg K ha–1 yr–1) with horticultural systems showing large surpluses resulting from purchased manure. The estimation of N fixation and quantities of nutrients in purchased manures may introduce significant errors in nutrient budgets. Overall, the data illustrate the diversity of management systems in place on organic farms, and suggest that used together with soil analysis, nutrient budgets are a useful tool for improving the long-term sustainability of organic systems.
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  • 52
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    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Earthworms influence a wide range of soil properties. They are affected by practices that perturb the soil or change organic inputs. This study compared populations in UK organic and conventional rotations differing in such practices. Three farm pairs, ranging from stockless to arable-grassland systems, were sampled on three occasions in each of two crop years. Additional farm pairs were sampled on a single occasion. Nine common earthworm species were grouped into three classes based on the depth ranges from which they were recovered. Cast and soil samples were taken from leys to compare aggregate stability, organic and nutrient content, and microbial biomass.  For similar rotation stages, populations of surface and shallow species classes were often larger in organic systems. In some comparisons the reverse was the case, particularly as the proportion of ley within each pair increased. System differences in biomass, but not abundance, could be attributed to the proportion of leys in rotations; individual earthworm weights were larger in conventional systems. Casts from both systems had markedly higher organic contents, stability, available P and K concentrations, and microbial biomass than underlying soil. This trend was more pronounced in conventional sites for nutrients and microbial biomass. Differences in populations and cast properties may have implications for soil fertility and wider ecosystem function.
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  • 53
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Generally, traditional soil surveys do not adequately account for the spatial variability of soil properties. Maps that are derived using these cursory soil data are likely to contain errors and thus make interpretation and soil management difficult. On the other hand quantitative methods of soil inventory at the field scale involve the design and adoption of sampling regimes and laboratory analysis that are time consuming and costly. In the latter case new technologies are required to efficiently sample and observe the soil in the field. This is particularly the case where soil salinization is prevalent, and detailed quantitative information for determining its cause is required. In this paper, a Mobile Electromagnetic Sensing System (MESS) is described and its application in an irrigated-cotton field, located in the lower Namoi valley in New South Wales, Australia. Results from the EM38 instrument were found to be correlated with the effective cation exchange capacity (r2= 0.81). This was related to variability in soil mineralogy across the field. In addition, differences in soil chemical and textural variables, measured along a transect and adjacent to water storage, were used to identify seepage areas near a water reservoir where soil salinization was evident.
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  • 54
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    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Precision Agriculture seeks to match resource application and agronomic practice with soil and crop requirements as they vary in both space and time. Therefore, an understanding of both the temporal and the spatial components of variability is essential before decisions can be made about the feasibility of site-specific management. In the present study, the spatial and the temporal components of variability in certain key soil properties of a grassland field were evaluated to assess the likely feasibility of adopting a site-specific approach to grassland management. A 7.9 ha grassland field was selected for the study and soil samples were taken three times at regular 25 m intervals across the field over a two year period, and chemically analysed. Classical and geostatistical procedures were used to evaluate the spatial variability and the temporal stability of soil property distributions. Soil extractable P and K had the greatest within-field variability and soil pH the least. Soil K distributions were also highly unstable over time and it was concluded that the optimal risk aversion strategy would be to apply uniform dressings of this nutrient to the entire field. In contrast, soil pH, P, Mg and sulphate distributions were not only temporally stable, but were also spatially correlated over reasonably large ranges. It was concluded that these properties might be managed in a site-specific way based on the results of periodic soil testing in three clearly defined management sub-units within the field. Over the two year period, C and N accumulated in the soil at surprisingly high rates on certain parts of the field but not in others.
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  • 55
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    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. The worldwide occurrence of saline sodic and sodic soils on more than half a billion hectares warrants attention for their efficient, inexpensive and environmentally acceptable management. These soils can be ameliorated by providing a source of calcium (Ca2+) to replace excess sodium (Na+) from the cation exchange sites. Although chemical amendments have long been used to ameliorate such soils, the chemical process has become costly during the last two decades in several developing countries. As a low-cost and environmentally acceptable strategy, the cultivation of certain salt tolerant forage species on calcareous sodic and saline sodic soils, i.e. phytoremediation, has gained interest among scientists and farmers in recent years. In a field study conducted at three calcareous saline sodic sites (pHs=8.1–8.8, ECe=7.8–12.5 dS m–1, SAR=30.6–76.1) in the Indus Plains of Pakistan, we compared chemical and phytoremediation methods. There were four treatments; two involved plants: Kallar grass (Leptochloa fusca (L.) Kunth), and sesbania (Sesbania bispinosa (Jacq.) W. Wight). The other two treatments were uncropped: soil application of gypsum and an untreated control. All treatments were irrigated with canal water (EC=0.22–0.28 dS m–1). The plant species were grown for one season (5–6 months). Sesbania produced more forage yield (34 t ha–1) than Kallar grass (23 t ha–1). Phytoremediation and chemical treatments resulted in similar decreases in soil salinity and sodicity, indicating that phytoremediation may replace or supplement the more costly chemical approach. The soil amelioration potential of sesbania was similar to that of the Kallar grass, which suggests that moderately saline sodic calcareous soils can be improved by growing a forage legume with market value.
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  • 56
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    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Nitrate leaching was measured for four years at the Royal Agricultural College ‘s Coates Farm in the Cotswolds, England. Coates is a typical Cotswold mixed farm with thin, well-drained calcareous soils especially prone to leaching. Over the duration of this study there were dairy, sheep and arable enterprises on the farm. A ‘Farm Gate’ nitrogen (N) budget was constructed. Small 120 m × 20 m ‘farmlets’ were sited in ten fields across the farm, covering all parts of the rotation, as the sites for detailed measurements. Each farmlet received the same management as the rest of the field in which they were situated. Using ceramic probes inserted to 60 cm, soil water was sampled every two weeks throughout the winter drainage season. The annual drainage varied from 135 mm under grassland in 1996/7 to 600 mm under cereals in 1998/9. Average N losses by leaching were determined mostly by rainfall and were 65 kg N ha–1 yr–1, accounting for 25% of the N inputs. Especially leaky parts of the rotation were the ploughing out of a lucerne ley and the grazing of stubble turnips with sheep, both typical Cotswold farm practices. The research highlights some of the difficulties in developing practicable, profitable management practices to decrease nitrate losses.
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  • 57
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    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Differences in land-use history within soil series, although not influencing soil classification, lead to variability of non-diagnostic soil properties in soil databases. Regional studies that use soil databases are confronted with this considerable variability. This has, for example, been reported in regional studies focused on nitrate leaching from agricultural land. Such findings have a direct impact on regional assessments of nitrate leaching from dairy farms on sandy soils, a major environmental issue in the Netherlands. There is thus a need to deal with this variability in soil properties.We were able to relate soil organic nitrogen, soil organic carbon and its dynamics to land use history for a Dutch sandy soil series. Within one soil series, three different land use histories were identified: old grassland, reseeded grassland and grassland converted from continuous cropping with silage maize. The addition of landscape characteristics significantly improved the regression models based on land-use only. Once established for any given soil series, such relationships can significantly improve soil survey input into dynamic models of soil behaviour such as regional nitrate leaching studies.
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  • 58
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    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Many former estimates of regional scale C sequestration potential have made use of linear regressions based on long-term experimental data, whilst some have used dynamic soil organic matter (SOM) models linked to spatial databases. Few studies have compared the two methods. We present a case study in which the potential of different land management practices to sequester carbon in soil in arable land is estimated by different methods. Two dynamic SOM models were chosen for this study, RothC (a soil process model) and CENTURY (a whole ecosystem model with a SOM module). RothC and CENTURY are the two most widely used and validated SOM models worldwide. A Geographic Information System (GIS) containing soil, land use and climate layers, was assembled for a case study in central Hungary. GIS interfaces were developed for the RothC and CENTURY models, thus linking them to the spatial datasets at the regional level. This allowed a comparison of estimates of the C sequestration potential of different land management practices obtained using the two models and using regression based approaches. Although estimates obtained by the different approaches were of the same order of magnitude, differences were observed. Some of the land management scenarios studied here showed sufficient C mitigation potential to meet Hungarian CO2 reduction commitments. For example, afforestation of 12% current arable land could sequester 0.042–0.092 Tg yr–1 in the soil alone, or 0.285–0.588 Tg C yr–1 in both soil and biomass; 1990 level CO2 emissions for the study area were 4.7 Tg C with a corresponding reduction commitment of 0.282 Tg C. It is not, however, suggested that this is the only, or the most favourable way, in which to meet the commitments.
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    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. A revised set of physical and chemical parameter estimates is presented for the soil units of the world, as described by the two FAO soil legends (version 1974 and 1988). The study is based on 9607 soil profiles, which include profiles held in version 1.0 of the WISE database. Upon a screening of data integrity and comparability of analytical methods, derived statistics were generated for 28 soil chemical and physical attributes identified as being useful for assessment of land suitability, crop growth simulation datasets, and analyses of global environmental change.
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    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Drainage of peat soils for agriculture can lead to large carbon losses due to oxidation of peat. We estimated peat subsidence rates and total carbon losses, due to 40 years of dairy farming on a former peat bog, by measuring the thickness of peat and total carbon of farmland and of an adjacent unmodified peat bog above a marker tephra layer that was deposited about 200 AD. Subsidence rates averaged 3.4 cm yr–1 (95% confidence interval of 3.2 to 3.5 cm yr–1) and carbon loss averaged 3.7 t ha–1 yr–1 (95% confidence interval of 2.5 to 5.0 t ha–1 yr–1). On average, 63% of the subsidence was due to consolidation, with the remainder (37%) attributed to losses of organic matter due to peat mineralization.
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  • 61
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    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. In organic agriculture, where K may be a limited resource, reliable tools are important in the assessment of K availability in the soil in order to avoid K deficiency. We investigated the effect of four organic farming systems on the exchangeable K in the plough layer of a six-course crop rotation from 1994 to 1997. The accumulated K balances over the four years varied between −49 and +120 kg K ha–1and the corresponding exchangeable K (0–20 cm) in autumn 1997 was 7.1 and 9.6 mg K 100 g soil–1, respectively, as an average of the crop rotation. The exchangeable K fraction responded to the K application in manure and to the crop in the rotation. In an additional experiment, no yield response to K was found, despite a low level of exchangeable K. The exchangeable K was a useful indicator of changes in the K status in the farming system with the largest positive K balance, but this K fraction was insufficient as an indicator in the other three farming systems. The considerable variation of exchangeable K through the crop rotation makes the soil test method most suitable at the crop rotation level where fluctuations caused by crop and management are smoothed out.
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  • 62
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    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Phosphorus (P) in overland flow is mediated by soil P, added P, erosion, and hydrological processes and their interaction as affected by landscape position and length of flow. We investigated the effect of flow path length (1 to 10 m long plots) on P transport in overland flow with and without a localized dairy manure application (75 kg P ha–1 added to the upslope end [0.5 m] of each plot) and simulated rainfall (7 cm h–1), at two sites within an agricultural watershed in Pennsylvania, USA. Particulate loss in overland flow was c. 20% greater from manured than unmanured plots due to the less dense nature of manure than soil. Increased soil moisture at Site 2 contributed to a greater loss of P compared to Site 1, both with and without manure; with most occurring as particulate P (60 to 90% of total P). Further, the selective erosion of fine particulates (24 to 34% clay) and P loss increased with plot length. From a management perspective our results demonstrate that the forms and amounts of P loss are greatly influenced by flow path length and interactions among antecedent moisture, soil P, and texture.
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  • 63
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. Nitrous oxide (N2O) is involved in both ozone destruction and global warming. In agricultural soils it is produced by nitrification and denitrification mainly after fertilization. Nitrification inhibitors have been proposed as one of the management tools for the reduction of the potential hazards of fertilizer-derived N2O. Addition of nitrification inhibitors to fertilizers maintains soil N in ammonium form, thereby gaseous N losses by nitrification and denitrification are less likely to occur and there is increased N utilization by the sward. We present a study aimed to evaluate the effectiveness of the nitrification inhibitor dicyandiamide (DCD) and of the slurry additive Actilith F2 on N2O emissions following application of calcium ammonium nitrate or cattle slurry to a mixed clover/ryegrass sward in the Basque Country. The results indicate that large differences in N2O emission occur depending on fertilizer type and the presence or absence of a nitrification inhibitor. There is considerable scope for immediate reduction of emissions by applying DCD with calcium ammonium nitrate or cattle slurry. DCD, applied at 25 kg ha–1, reduced the amount of N lost as N2O by 60% and 42% when applied with cattle slurry and calcium ammonium nitrate, respectively. Actilith F2 did not reduce N2O emissions and it produced a long lasting mineralization of previously immobilized added N.
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    Soil use and management 18 (2002), S. 0 
    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. We evaluated the effectiveness of capillary-wick samplers (PCAPS) for continuous monitoring of resident nitrate concentration in three ‘soil-crop-climate’ systems differing in soil type, land use and climate. These systems involved: (i) acid silty soils under a beech-oak forest affected by heavy N-NH4+ deposition in Belgium; (ii) silty soils under wheat cropping and a short rotation willow coppice plantation (SRC) in Belgium; and (iii) volcanic ash soils under plantain cultivation with and without urea fertilization in Colombia. The PCAPS continuously applied a suction of 0 to 5.4 kPa to the soil water below the effective rooting zone without the need for an auxiliary vacuum source. The nitrate concentrations showed large variations over time and ranged between 6–192 mg l–1 under forest, 19–143 mg l–1 under wheat, 11–47 mg l–1 under SRC and 3–138 mg l–1 under fertilized plantain. The analysis of the soil leachates collected with PCAPS confirms previous results dealing with leaching of nitrate and alkaline and alkaline-earth cations in similar ‘soil-crop-climate’ systems. It was concluded that PCAPS was a suitable tool to collect soil solutions and that it could help to assess nitrate leaching losses in various ecological or cropping conditions.
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    ISSN: 1475-2743
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract. The páramo is a high-altitude ecosystem of the northern Andes. The vegetation is continuous, with grasses as the dominant groundcover. Because of their high water retention, páramos play a fundamental role in water availability for all the population of the inter-Andean valleys. There are many studies of this specific ecosystem, but very few are focussed on overgrazing and its effect on vegetation and soil properties. Intensive grazing started less than 20 years ago and was studied in a representative area in the western Cordillera of central Ecuador covered by recent volcanic ash deposits. Intensive sheep grazing has led to a strong decline in the number of plant species, the replacement of the tussock grass vegetation by a short carpet grass vegetation, and an increase of bare land. In that area, the upper 50 cm of Andisols are deeply affected by a convergent decrease of Al and Fe oxalate and pyrophosphate in soil extracts, carbon contents decrease from 100 g kg–1 to less than 50 g kg–1 in the humid zone, from 70 to 40 g kg–1 in the dry zone and a reduction of water-retention capacity at −33 kPa matrix potential from 800 g kg–1 to 200 g kg–1 in humid zones, from 350 to less than 100 g kg–1 in drier areas. They showed also a decrease in the macrostructure and the development of a highly water repellent microstructure. All these important transformations favour the development of aeolian erosion in dry areas, runoff on bare surfaces, and gully erosion on slopes. The role of the páramo in water-regulation of this ecosystem seems to have been adversely affected for the future.
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    Ground water 40 (2002), S. 0 
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    Ground water 40 (2002), S. 0 
    ISSN: 1745-6584
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Energy, Environment Protection, Nuclear Power Engineering , Geosciences
    Notes: Two of the biggest drawbacks of using permeable reactive barriers (PRBs) to treat contaminated ground water are the high capital cost of installation, particularly when the contaminated ground water is deep below ground surface, and the uncertainty of whether or not PRBs remain effective for the long time scales (e.g., decades) needed for many contaminant plumes. The use of an injection-extraction treatment well pair (IETWP) for capture and treatment of contaminated ground water can circumvent these difficulties, while still providing many of the same advantages offered by PRBs. In this paper, the hydraulics of IETWPs and PRBs are compared, focusing primarily on the width of the captured plume. It is demonstrated that IETWPs act as hydraulic barriers in a manner similar to PRBs, and that IETWPs provide excellent plume capture. A mathematical expression is presented for the plume capture width of an IETWP oriented perpendicular to the ground water flow direction in a homogeneous aquifer. Also discussed are other practical considerations that might determine whether an IETWP is better suited than a PRB for a particular contaminated site; these considerations include operating and maintenance costs, and the conditions under which an IETWP system can be used for in situ remediation.
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  • 68
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    Ground water 40 (2002), S. 0 
    ISSN: 1745-6584
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Energy, Environment Protection, Nuclear Power Engineering , Geosciences
    Notes: Two environmental tracer methods are applied to the Ti-Tree Basin in central Australia to shed light on the importance of recharge from floodouts of ephemeral rivers in this arid environment. Ground water carbon-14 concentrations from boreholes are used to estimate the average recharge rate over the interval between where the ground water sample first entered the saturated zone and the bore. Environmental chloride concentrations in ground water samples provide estimates of the recharge rate at the exact point in the landscape where the sample entered the saturated zone. The results of the two tracer approaches indicate that recharge rates around one of the rivers and an extensive flood-plain are generally higher than rates of diffuse recharge that occurs in areas of lower topographic relief. Ground water 2H/1H and 18O/16O compositions are all depleted in the heavier isotopes (δ2H = -67%0 to -50%0; 518O = -9.2%0 to -5.7%0) compared with the long-term, amount-weighted mean isotopic composition of rainfall in the area (δ2H = -33.8%0; δ18O = -6.3%0). This indicates that recharge throughout the basin occurs only after intense rainfall events of at least 150 to 200 mm/month. Finally, a recharge map is developed to highlight the spatial extent of the two recharge mechanisms. Floodout recharge to the freshest ground water (TDS 〈1000 mg/L) is ∼1.9 mm/year compared with a mean recharge rate of ∼0.2 mm/year to the remainder of the basin. These findings have important implications for management of the ground water resource.
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  • 69
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    Ground water 40 (2002), S. 0 
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  • 70
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    Ground water 40 (2002), S. 0 
    ISSN: 1745-6584
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Energy, Environment Protection, Nuclear Power Engineering , Geosciences
    Notes: The delineation of well capture zones is a basic component of ground water protection. The conventional methodology for capture zone delineation is backward advective particle tracking, often applied under the assumption of a two-dimensional aquifer. The suitability of the conventional approach for complex heterogeneous multi-aquifer systems was investigated, using the Waterloo Moraine aquifer system as an example. It was found that the conventional approach produces irregular particle tracks that require judgment to interpret in a meaningful way, and it can raise questions that may affect the credibility of the capture zone delineation. As an alternative, the potentially powerful but little-used backward-in-time advective-dispersive transport approach was investigated. A key advantage of this approach is its capability to represent local heterogeneities through the dispersion term. The dispersion process has a natural smoothing effect that results in unambiguous capture zones without the need for interpretation, thus enhancing credibility. The question of capture zone validation is also addressed. The meaning of a three-dimensional capture zone is considered, and it is shown that a fully three-dimensional representation of the system is crucial for valid results. The distinction between the maximum extent capture zone and the surface capture zone is also explained. In the case of complex heterogeneous systems, advective particle tracking can be used as an initial screening tool, whereas the more realistic backward-transport modeling approach can be used for final capture-zone delineation.
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  • 71
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  • 72
    ISSN: 1745-6584
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Energy, Environment Protection, Nuclear Power Engineering , Geosciences
    Notes: Tracer tests represent the most appropriate approach for assessing hydrodispersive parameters such as transversal and longitudinal dispersivities or kinematic porosity on an aquifer scale. They are generally carried out by injecting a tracer in a borehole and measuring its concentration over time in neighboring boreholes by extracted volume sampling or downhole measurements. Logging is one of the most suitable methods for evaluating fissured reservoirs. But short circuits between fractures with different hydraulic potential through boreholes induce mixing phenomena that cannot be avoided without packers. This mixing can shift the breakthrough curves deduced from the logs for each producing fracture and distort determination of their location.The method proposed in this paper aims at measuring the flow rate and the solute breakthrough for hydraulically active fractures, in open boreholes. It involves estimating a velocity profile along the borehole column by the analysis of two successive logs: a shift function according to depth is thus determined by comparison between log portions on each successive one. The velocity gradients reflect the inward or outward flow rates produced by each fracture. On the basis of these flow rates, it is possible to determine the mixing effects inside the borehole and then to plot unbiased breakthrough curves for each producing fracture.This method was applied at a granitic site in the eastern Pyrenees. In spite of some questionable limitations, the results showed that the method seems adapted to situations with many fractures. The precise hydraulic pattern which is obtained at the borehole scale is discussed in terms of a dual porosity model. Furthermore, interpretation of the breakthrough curves for fractures corrected for mixing effects revealed that Peclet numbers are strongly underestimated if this phenomenon is not considered.
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  • 73
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    Ground water 40 (2002), S. 0 
    ISSN: 1745-6584
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Energy, Environment Protection, Nuclear Power Engineering , Geosciences
    Notes: Transport of a conservative compound and two sorbing compounds through fractured chalk was studied using flow-through columns consisting of chalk cores with a single subvertical fracture. Two types of chalk matrix were compared, an oxidized white chalk with low organic carbon content (0.2%), and a gray chalk with a higher organic carbon content (1.3%). Initial rapid breakthrough followed by a delayed approach to a relative concentration of unity for the conservative compound (2,6–difluorobenzoic acid [DFBA]) was clear evidence for diffusion into the porous chalk matrix. Matrix diffusion of DFBA was apparently much greater in the gray chalk columns than in the white chalk columns. Breakthrough curves (BTCs) of the sorbing compounds (2,4,6–tri-bromophenol [TBP] and ametryn [AME]) were retarded in all cases as compared to the conservative compound. Sorption retardation was far greater in the gray chalk as compared with the white chalk, in good agreement with results from batch sorption experiments. BTCs for the conservative compound were relatively nonhysteretic for both white and gray chalk columns. In contrast, BTCs for the sorbing compounds were hysteretic in all cases, demonstrating that sorption was not at equilibrium before desorp-tion began. These experiments suggest that on a field scale, transport of contaminants through fractures in chalk and other fractured porous media will be attenuated by diffusion and sorption into the matrix.
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  • 75
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    Ground water 40 (2002), S. 0 
    ISSN: 1745-6584
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Energy, Environment Protection, Nuclear Power Engineering , Geosciences
    Notes: Models for ground water flow (MODFLOW) and particle tracking (MODPATH) were used to determine ground water flow patterns, principal ground water discharge and recharge zones, and estimates of ground water travel times in an unconfined ground water system of an outer coastal plain watershed on the Delmarva Peninsula, Virginia. By coupling recharge and discharge zones within the watershed, flowpath analysis can provide a method to locate and implement specific management strategies within a watershed to reduce ground water nitrogen loading to surface water. A monitoring well network was installed in Eyreville Creek watershed, a first-order creek, to determine hydraulic conductivities and spatial and temporal variations in hydraulic heads for use in model calibration. Ground water flow patterns indicated the convergence of flow along the four surface water features of the watershed; primary discharge areas were in the noontide portions of the watershed. Ground water recharge zones corresponded to the surface water features with minimal development of a regional ground water system. Predicted ground water velocities varied between 〈 0.01 to 0.24 m/day, with elevated values associated with discharge areas and areas of convergence along surface water features. Some ground water residence times exceeded 100 years, although average residence times ranged between 16 and 21 years; approximately 95% of the ground water resource would reflect land use activities within the last 50 years.
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  • 76
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    ISSN: 1745-6584
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    Topics: Energy, Environment Protection, Nuclear Power Engineering , Geosciences
    Notes: Ground water reservoirs in the Choshuichi alluvial fan, central western Taiwan, were investigated using direct-current (DC) resistivity soundings at 190 locations, combined with hydrogeological measurements from 37 wells. In addition, attempts were made to calculate aquifer transmissivity from both surface DC resistivity measurements and geostatistically derived predictions of aquifer properties.DC resistivity sounding data are highly correlated to the hydraulic parameters in the Choshuichi alluvial fan. By estimating the spatial distribution of hydraulic conductivity from the kriged well data and the cokriged thickness of the correlative aquifer from both resistivity sounding data and well information, the transmissivity of the aquifer at each location can be obtained from the product of kriged hydraulic conductivity and computed thickness of the geoelectric layer. Thus, the spatial variation of the transmissivities in the study area is obtained.Our work is more comparable to Ahmed et al. (1988) than to the work of Niwas and Singhal (1981). The first “constraint” from Niwas and Singhal's work is a result of their use of linear regression. The geostatistical approach taken here (and by Ahmed et al. [1988]) is a natural improvement on the linear regression approach.
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  • 77
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  • 78
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    Ground water 40 (2002), S. 0 
    ISSN: 1745-6584
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    Topics: Energy, Environment Protection, Nuclear Power Engineering , Geosciences
    Notes: This paper presents a modeling analysis of the geochemical evolution of a contaminated sandy aquifer at a uranium mill tailings site in the western United States. The tailings pond contains fluids having a pH of 1.5 to 3.5 and high levels of As, Be, Cd, Cr, Pb, Mo, Ni, Se, 226Ra, 228Ra, 230Th, 238U, and 234U. Seepage of tailings fluids into the aquifer has formed a low-pH ground water plume. The reclamation plan is to install a low-permeability cover on the tailings pond to stop the seepage and allow the plume to be attenuated by reactions with the aquifer matrix and flushed by uncontaminated upgradient ground water. To evaluate this reclamation scenario, ground water and sediment core samples were analyzed along one flowpath. Speciation-solubility and mass-transfer modeling revealed two sets of chemical reactions for acid seepage and flushing, respectively. The current concentrations and distribution of ground water constituents can be interpreted as being controlled by stepwise pH-buffer reactions with calcite, amorphous aluminum hydroxide, and amorphous iron hydroxides. These buffer reactions divide the aquifer into zones of near-constant pH, separated by interface zones. For the flushing stage, it is predicted that reactions with surface-bound species will dominate the reaction paths, and more pore volumes are required to neutralize the plume than predicted by models that do not consider surface reactions. Direct mineralogical and surface analysis is needed to substantiate this assertion.
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  • 79
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    Topics: Energy, Environment Protection, Nuclear Power Engineering , Geosciences
    Notes: Redox conditions exercise important controls on water chemistry in the red-bed Sherwood Sandstone Aquifer of the English East Midlands. A distinct redox boundary exists some 3 to 5 km downgradient of the onset of confined conditions, defined by a 300 mV drop in Eh and complete reaction of dissolved oxygen. The aerobic aquifer contains polluted water with high nitrate concentrations and organic carbon significantly above background concentrations (〉 0.2 mg/L). Concentrations of Fe, Mn, and Mo are highest in reducing ground water. As, Sb, Se, and U show a residence-time-dependent increase in aerobic ground water, but are much lower under reducing conditions. Iron oxides are believed to play a key role in determining the spatial patterns in many of these trace elements as a result of Eh- and pH-controlled sorption/desorption reactions, as well as some reductive dissolution in the confined aquifer. Fresh ground water persists in the confined aquifer to approximately 30 km downgradient of the redox boundary. However, SO4 concentrations increase progressively along the flowline as a result of the dissolution of gypsum or anhydrite. Concentrations of available organic carbon are low in ground water (1 mg/L or less) and are also likely to be limited in the sediments; conditions are insufficiently reducing for significant sulphate reduction to have taken place. Only in the extreme down-gradient (eastern) part of the aquifer do conditions become sufficiently reducing with some evidence of sulphate reduction. In this part of the aquifer, ground water is more saline (TDS values up to 10 g/L) and is believed to be composed substantially of older formation water. This has distinctive concentrations of several redox-influenced trace elements, with relatively high Fe, Mn, As, and Sb, occasional high Cr, and low Mo relative to the confined fresh ground water upgradient.
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  • 81
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    Topics: Energy, Environment Protection, Nuclear Power Engineering , Geosciences
    Notes: Investigation techniques for karst flow systems are based mainly on the study of different signals leaving the system caused by natural or induced external influences. Each signal represents one of the systems outputs (e.g., hydraulic, chemical, physical, or isotopic responses) that reflect the characteristics of the entire system.In this paper, we present a method to infer information about the structure of karst systems. It is based on a simultaneous analysis of chemical and hydraulic responses. Beside the classical piston flow at the beginning of a flood pulse, we define a chemically based recession flow phase. During this phase, field data show that the concentration of total dissolved solids can be considered as an exponential function of the logarithm of flow. This relationship allows two parameters to be defined, one of which is dependent on the structure and degree of development of the karst conduit network, the other is dependent mainly on bioclimatic factors. Data collected from seven karst springs are used to support ideas introduced in the paper.
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  • 82
    ISSN: 1745-6584
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    Topics: Energy, Environment Protection, Nuclear Power Engineering , Geosciences
    Notes: Vertical profiles of tetrachloroethene (or perchloroethylene, PCE) and trichloroethene (TCE) were used to validate a diffusion process in a natural aquitard at Dover Air Force Base, Delaware. PCE and TCE distributions in the aquitard underlying an unconfined aquifer were sampled from core tubes obtained at four times over the course of a 35–month field investigation within “test cells” that were isolated from the surrounding ground water by means of grout-sealed steel sheetpile barriers (Mackay et al. 2000). For the final 23 months of this period, boundary conditions at the aquiferJaquitard interface were such that a “back diffusion” of contaminants from the aquitard was induced. Modeling predictions of concentration changes were made on the basis of the earliest coring results and an assumption of sorption-retarded diffusion and using laboratory information about sorption and diffusion characteristics of the media. The predictive modeling was complicated by the fact that “initial” and “final” PCE and TCE distributions in the aquitard were measured at different (albeit proximate) coring locations, such that results reflect spatial variations in aquitard characteristics. This problem was solved by means of an inverse interpretation that involved spatial “translation” of observed profiles on the basis of the laboratory characterizations and assuming a common aquifer-side contaminant history. Predictions indicated substantial change in PCE and TCE concentrations within the upper aquitard (near the aquiferJaquitard interface) and the development of a back-diffusion profile up into the aquifer. Modeling also predicted comparatively minor profile changes in the deeper aquitard, and especially in the deep layer where sorption was strongest. All of these predicted effects were observed in the coring results. Although not exact, the agreement between predictions and observations was sufficiently good to justify the basic tenets of the diffusion model and to support a conclusion that major processes of advection and Jor transformation were unimportant within the 35-month time scale of this work.
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    Topics: Energy, Environment Protection, Nuclear Power Engineering , Geosciences
    Notes: Lineaments derived from three image types (1:80,000 black and white, 1:58,000 color infrared, and 1:250,000 side-looking airborne radar) were compared to water-bearing features within a 9.6 km section of tunnel being constructed through foliated crystalline metamorphic bedrock in a glaciated region of eastern Massachusetts. Lineaments drawn by three observers during two independent trials (N = 9137) were reduced to three sets (one per image type) of coincident lineaments (N = 794). Thirty-five coincident lineaments crossed the tunnel. Nineteen discrete flow zones, each producing ≥ 19 L/min, were identified in the tunnel and used to quantify the reliability of lineament analysis as a method of predicting water-bearing features in glaciated metamorphic rocks.Thirteen (68%) of the flow zones correlate with coincident lineaments, six zones correlate with more than one image type, and one zone correlates with all three image types. Overall, without additional corroborating evidence, it is difficult to interpret in advance which lineaments will result in a successful correlation with water-producing zones in the subsurface and which ones will not. Most of the observed flow (80%) correlates with northwest-trending coincident lineaments; however, the majority of the flow (67%) associated with these lineaments is produced from structures that strike to the north or northeast. In addition, only 15 of the 35 coincident lineaments correlate with the flow zones, indicating that 20 lineaments are not associated with any appreciable flow. Six flow zones are undetected by the lineament analysis.
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    Topics: Energy, Environment Protection, Nuclear Power Engineering , Geosciences
    Notes: A simple analytical model is presented for predicting subsurface gas flow to a vadose-zone well in response to atmospheric pressure fluctuations (barometric pumping). The effective radial permeability (kr) in the vicinity of the well is determined during model calibration using less than two weeks worth of data. By combining the flow solution with a solution for the vertical gas pressure, only atmospheric pressure data are required to predict the induced flow through a well. The ability to quantitatively predict naturally induced flow in vadose-zone wells by simple and inexpensive measurements is invaluable for systems using barometric pumping for remediation.
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  • 86
    ISSN: 1574-6968
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    Topics: Biology
    Notes: Interactions between staphylococci and the joint tissues of the host lead typically to rapidly progressing and highly destructive processes. Staphylococci possess a vast arsenal of components and products that contribute to the pathogenesis of joint infection. Occasionally these compounds have overlapping activities and act either in concert or alone. Host responsiveness to staphylococcal infection displays an even more complex pattern. Most of the cells and molecules that participate in the innate immune system protect the host against bacteria. However, the staphylococci have developed systems that counteract endogenous protective mechanisms. Interestingly, certain cells and molecules of the acquired immune system potentiate the severity of infection by triggering exaggerated responses to the staphylococcal danger signals. This review deals with the intricate host–bacterium interactions that occur during experimental septic arthritis, and outlines potential preventive and treatment modalities.
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    Topics: Biology
    Notes: The previously isolated T-even type coliphage PP01, specifically infective to Escherichia coli O157:H7, uses the outer membrane protein OmpC as a receptor. The characterization of a spontaneous PP01-resistant strain indicated that it had lost ompC due to the deletion of a 14-kbp region upstream of and partially including ompC. Two host range mutants, able to infect an ompC null mutant, were isolated. Sequencing of gene 38, which codes for the receptor recognition protein Gp38, indicated three mutations in one mutant and two in the other. Both mutant proteins had a Gly208Arg, a Gly161Arg or Gly101His replacement, respectively, and the one mutant phage in addition a Trp189Arg replacement. These alterations suggest that the host range was mediated by a more positively charged Gp38.
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    ISSN: 1574-6968
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    Topics: Biology
    Notes: The gene (open reading frame Tm1155, g6pd) encoding glucose-6-phosphate dehydrogenase (G6PD, EC 1.1.1.49) of the hyperthermophilic bacterium Thermotoga maritima was cloned and functionally expressed in Escherichia coli. The purified recombinant enzyme is a homodimer with an apparent molecular mass of 95 kDa composed of 60-kDa subunits. Rate dependence (at 80°C) on glucose-6-phosphate and NADP+ followed Michaelis–Menten kinetics with apparent Km values of 0.15 mM and 0.03 mM, respectively; apparent Vmax values were about 20 U mg−1. The enzyme also reduced NAD+ (apparent Km 12 mM, Vmax 12 U mg−1). The 1000-fold higher catalytic activity (kcat/Km) with NADP+ over NAD+ defines the G6PD as NADP+ specific in vivo. G6PD activity was competitively inhibited by NADPH with a Ki value of 0.11 mM. With a temperature optimum of 92°C the enzyme is the most thermoactive G6PD described.
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    Topics: Biology
    Notes: The β subunit of Escherichia coli DNA polymerase III holoenzyme was fused to the green fluorescent protein GFP. The gene fusion under the control of the heterologous lac promoter was used to replace the wild-type allele in the chromosome. The formation of GFP-β fluorescent foci in GFP-β expressing cells required DNA replication and their number per cell was dependent on cell growth. Examination of GFP-β foci in a synchronous round of replication suggested that DNA replication was accompanied by the recruitment of GFP-β foci near the midcell, followed by the rapid migration of the foci in opposite directions to the 1/4 and 3/4 positions during DNA replication.
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    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: A rosy-pigmented Gram-negative, thermophilic bacterium with an optimum growth temperature of about 55°C was isolated from Tengchong hot springs in Yunnan province, China. Its growth scarcely occurred below 40°C or above 70°C. Phylogenetic and secondary structural analyses of 16S rRNA and DNA–DNA hybridization showed that the organism represented a new species of the genus Meiothermus. This new species could be distinguished easily from other species of the genus Meiothermus by the following phenotypic characteristics: rosy pigment, expanded body, sucrose and maltose were not utilized, gelatin and starch were not hydrolyzed. On the basis of the above data, the name Meiothermus rosaceus sp. nov. was proposed for the species represented by the strain RH9901T(CCTCC-AB200291).
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  • 91
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    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    FEMS microbiology letters 216 (2002), S. 0 
    ISSN: 1574-6968
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: Enterococci are increasingly important causes of nosocomial disease. Also, they are associated with food and have a history of use as dairy starter and probiotic cultures. An enterococcal surface protein Espfs is involved the virulence and biofilm-forming capacity of Enterococcus faecalis and recently we demonstrated the presence of a homologue Espfm in E. faecium. Here we describe the complete structure of Espfm and demonstrate that its distribution in E. faecium correlates with disease associated strains from a range of pathological sites.
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  • 92
    ISSN: 1574-6968
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: Mycorrhizas of Tuber brumale on Quercus pubescens and Tilia americana were obtained in vitro using micropropagated plantlets. Mycelium pure cultures were used for inoculation. Both the mycelium used for the inoculations, as well as the mycorrhizas which were obtained, were identified using several molecular approaches: analysis of the ITS region, polymerase chain reaction (PCR) specific primers and sequencing. The mycorrhizas were described from a morphological standpoint. Some of their biometric characteristics were different in bass-wood than they were in oak, thus showing the influence of the host plant on several of the morphological features believed to be necessary for the identification of the species. Considering the variability of their morphological characteristics, molecular analysis proved to be a necessary tool for the recognition of the mycorrhizas of Tuber spp.
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  • 93
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    FEMS microbiology letters 216 (2002), S. 0 
    ISSN: 1574-6968
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: The bacterial genus Streptomyces forms chains of spores by septation at intervals in aerial hyphae and subsequent maturation on solid medium. Substrate hyphae undergo extensive lysis, liberating nutrients on which aerial hyphae develop. Some mutant strains, however, ectopically form spores by septation in substrate hyphae on solid medium or in vegetative hyphae in liquid medium, which suggests that all hyphae have the potential to differentiate into spores. A Streptomyces griseus mutant strain NP4, which has a mutation in the regulatory system for an ATP-binding cassette (ABC) transporter gene, forms ectopic spores in substrate hyphae only on glucose-containing medium. In addition, overexpression of a substrate-binding protein of the ABC transporter in the wild-type strain causes ectopic septation in very young substrate hyphae and subsequent sporulation in response to glucose. These ectopic spores germinate normally. The ectopic sporulation is independent of A-factor, a microbial hormone that determines the timing of aerial mycelium formation during normal development. Thus, substrate hyphae of Streptomyces have a potential to develop into spores without formation of aerial hyphae. For programmed development, therefore, the strict repression of septum formation in substrate mycelium should be necessary, as well as the positive signal relay leading to aerial mycelium formation followed by septation and sporulation.
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  • 94
    ISSN: 1574-6968
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: The catalase gene katA of Staphylococcus xylosus was cloned. It encodes a protein of 494 amino acids with a molecular mass of 56.9 kDa, closely related to monofunctional catalases. A katA mutant still showed a relatively high catalase activity demonstrating that S. xylosus possesses more than one enzyme. By Southern blot analysis using a katA probe, a second genetic locus distinct from katA was detected that probably contained the additional catalase gene. To analyse katA expression, a transcriptional fusion of the katA promoter region to a promoterless β-galactosidase gene was integrated into the genome of S. xylosus. katA expression is induced upon entry into stationary phase, by oxygen and hydrogen peroxide. Iron and manganese depletion induced katA transcription. Comparing the resistance of S. xylosus wild-type and the katA mutant strain to hydrogen peroxide clearly showed that KatA is essential for S. xylosus to cope with hydrogen peroxide stress. Therefore, S. xylosus has at least two differentially expressed catalases.
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  • 95
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    Oxford, UK : Blackwell Publishing Ltd
    FEMS microbiology letters 216 (2002), S. 0 
    ISSN: 1574-6968
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: The KEM1/XRN1 gene was originally identified because of its functions in microtubule-mediated processes, and is also known to be a major cytoplasmic 5′-3′ exoribonuclease gene, which is involved in RNA turnover. Here we present evidence that KEM1 plays a role in filamentous growth. In Saccharomyces cerevisiae, the filamentation signalling shares multiple components of the MAP kinase cascade (STE7, STE11, and KSS1) and the transcription factor STE12 with mating process. Both haploid invasive growth and diploid pseudohyphal growth were found to be greatly impaired in kem1 mutant strains. KEM1 affected the level of FLO11 transcripts and the expression of the filamentation-associated reporter genes, Ty1-lacZ and FLO11-lacZ. Suppression analysis implies that KEM1 does not affect the RAS/PKA pathway, but that it possibly functions downstream of the MAP kinase pathway during filamentation.
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  • 96
    ISSN: 1574-6968
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: Xylella fastidiosa strains are responsible for several plant diseases and since such isolates display a broad host range and complex biological behavior, genomic comparisons employing microarray hybridizations may provide an effective method to compare them. Thus, we performed a thorough validation of this type of approach using two recently sequenced strains of this phytopathogen. By matching microarray hybridization results to direct sequence comparisons, we were able to establish precise cutoff ratios for common and exclusive sequences, allowing the identification of exclusive genes involved in important biological traits. This validation will enable the use of microarray-based comparisons across a wide variety of microorganisms
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  • 97
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    FEMS microbiology letters 216 (2002), S. 0 
    ISSN: 1574-6968
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: Infections with bacteria producing shiga toxin are responsible for widespread disease and for the death of a large number of people. In the present study, we have developed a rapid method of high specificity for the detection of Shigella dysenteriae by combining immuno-capture of the bacteria and polymerase chain reaction (PCR) amplification of their toxin gene. We compared the sensitivity of our new method, referred to as immuno-capture toxin gene PCR (iTGPCR), with a conventional TGPCR (cTGPCR) method in detecting S. dysenteriae. Approximately 100 colony forming units (CFU) of bacteria in a volume of 400 μl were divided into 20 tubes with 5 CFU (20 μl). One group of 10 tubes was analyzed by iTGPCR and the other by cTGPCR amplification. All were positive in the 10 tubes using iTGPCR but, in contrast, only half were positive in the 10 tubes with the cTGPCR method. This method was used to detect S. dysenteriae type I in sewage samples without the normal tedious preparation methods. These findings suggest that iTGPCR gives enhanced test sensitivity, and allows determination of pathogen serotype, and differentiation of toxin-producing strains from non toxin-producing strains.
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  • 98
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    FEMS microbiology letters 216 (2002), S. 0 
    ISSN: 1574-6968
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: A 3.5-kb native plasmid (pND103) was identified in Streptococcus thermophilus ST2-1. Preliminary sequence analysis indicated that pND103 belongs to group I S. thermophilus plasmids. A region of approximately 2 kb appears to contain three components: a plus origin of replication (ori) typical of plasmids that replicate via rolling circle replication; a gene encoding a replication protein (rep); and a gene encoding a small heat shock protein (hsp). pND103 was then used to construct S. thermophilus/Escherichia coli hybrid cloning vectors by ligating different portions of pND103 to an origin-probe vector (pND330) composed of pUC19 and a Gram-positive erythromycin resistance gene. The shuttle vectors (pND913, pND914 and pND915) were successfully introduced back into plasmid-free S. thermophilus ST3–1 as well as to Lactococcus lactis LM0230 and E. coli JM109. Segregational and structural stability study indicated that these vectors can be maintained in these hosts. The results indicated that pND913, pND914 and pND915 are potential shuttle cloning vectors for S. thermophilus.
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  • 99
    ISSN: 1574-6968
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: Itaconate is known as a potent inhibitor of isocitrate lyase. Unexpectedly, itaconate was a strong inhibitor of acetate and propionate assimilation in isocitrate lyase-negative purple non-sulfur bacterium Rhodospirillum rubrum. It was shown that in cell extracts of R. rubrum itaconate inhibited propionyl-CoA carboxylase (PCC) activity. The participation of PCC in propionate assimilation in R. rubrum is well-documented, but the inhibition of acetate assimilation suggests that PCC is also involved in acetate metabolism. PCC is one of the enzymes of the citramalate cycle, the anaplerotic pathway proposed for R. rubrum as a substitute for the glyoxylate cycle. These results provide further support for the hypothesis of the occurrence of the citramalate cycle in R. rubrum. PCC from other isocitrate lyase-negative phototrophs, Rhodobacter sphaeroides and Phaeospirillum fulvum, was not inhibited by itaconate.
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  • 100
    ISSN: 1574-6968
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: An efficient method was developed to assign cloned genes to individual chromosomes of the fungus Podospora anserina. The chromosomes were separated by pulsed-field gel electrophoresis and the DNA was isolated from the gel bands. The DNA from the isolated chromosomes was slotted onto membranes; the resulting chromoslots were used to confirm that genetically mapped genes could be detected in the expected position. Then, 20 genes, not yet assigned to a linkage group, were attributed to individual chromosomes while six were attributed to a band containing two chromosomes.
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