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  • Elsevier  (220,939)
  • Springer  (130,003)
  • Institute of Physics  (72,741)
  • Molecular Diversity Preservation International  (60,646)
  • Public Library of Science  (20,533)
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  • American Physical Society (APS)  (18,783)
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  • 1
    Publication Date: 2020-10-13
    Description: Mount Etna is the highest relief in Sicily and represents a unique environment because of its long established and almost continuous eruptive activity, that has moulded its landforms and which has produced distinctive landscapes. Over the past 60 ka both destructive and constructive geological processes have produced the principal morphological features of the volcano such as the wide Valle del Bove depression, monogenic scoria cones and extensive lava flow fields. Relationships between Etna, its environment and human activity began in the Neolithic Period within the mountain foot region and have developed over millennia. Even though there has been a rapid rate of resurfacing by lava during historic times, the impact on human activity has been short-lived, recovery has been rapid and society has adjusted to the ever present hazard in distinctive ways.
    Description: Published
    Description: 467-478
    Description: 1V. Storia eruttiva
    Description: N/A or not JCR
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: book chapter
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  • 2
    Publication Date: 2020-11-18
    Description: The Pomici di Avellino eruption is the Plinian event of Vesuvius with the highest territorial impact. It affected an area densely inhabited by Early Bronze Age human communities and resulted in the long- term abandonment of an extensive zone surrounding the volcano. Traces of human life beneath the eruption products are very common throughout the Campania Region. A systematic review of the available archaeological data, the study of geological and archaeological sequences exposed in excava- tions, and the reconstruction of the volcanic phenomena affecting single sites has yielded an under- standing of local effects and their duration. The archaeological and volcanological analyses have shown that the territory was rapidly abandoned before and during the eruption, with rare post-eruption at- tempts at resettlement of the same sites inhabited previously. The definition of the distribution and stratigraphy of alluvial deposits in many of the studied sequences leads us to hypothesise that the scarce presence of humans during phases 1 and 2 of the Middle Bronze Age in the wide area affected by the eruption was due to diffuse phenomena of remobilisation of the eruption products, generating long- lasting alluvial processes. These were favoured by the deposition of loose fine pyroclastic material on the slopes of the volcano and the Apennines, and by climatic conditions. A significant resettlement of the territory occurred only hundreds of years after the Pomici di Avellino eruption, during phase 3 of the Middle Bronze Age. This study show the role of volcanic and related phenomena from a Plinian event in the settlement dynamics of a complex territory like Campania.
    Description: Published
    Description: 231-244
    Description: 1V. Storia eruttiva
    Description: 5V. Dinamica dei processi eruttivi e post-eruttivi
    Description: 6V. Pericolosità vulcanica e contributi alla stima del rischio
    Description: JCR Journal
    Keywords: Plinian eruption Eruption impact ; Volcanoclastic mass flow ; Vesuvius ; Bronze Age ; Eruption impact
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: article
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  • 3
    Publication Date: 2020-12-21
    Description: During the last few decades, 4D volcano gravimetry has shown great potential for illuminating subsurface processes at active volcanoes (including some that might otherwise remain “hidden”), especially when combined with other methods (e.g., ground deformation, seismicity, and gas emissions). By supplying information on changes in the distribution of bulk mass over time, gravimetry can provide unique information regarding such processes as magma accumulation in void space, gas segregation at shallow depths, and mechanisms driving volcanic uplift and subsidence. Despite its potential, 4D volcano gravimetry is an underexploited method, not widely adopted by volcano researchers or observatories. The cost of instrumentation and the difficulty in using it under harsh environmental conditions is a significant impediment to the exploitation of gravity at many volcanoes. In addition, retrieving useful information from gravity changes in noisy volcanic environments is a major challenge. While these difficulties are not trivial, neither are they insurmountable; indeed, creative efforts in a variety of volcanic settings highlight the value of 4D gravimetry for understanding hazards as well as revealing fundamental insights into how volcanoes work. Building on previous work, we provide a comprehensive review of 4D volcano gravimetry, including discussions of instrumentation, modeling and analysis techniques, and case studies that emphasize what can be learned from, campaign, continuous, and hybrid gravity observations. We are hopeful that this exploration of 4D volcano gravimetry will excite more scientists about the potential of the method, spurring further application, development, and innovation.
    Description: Published
    Description: 146-179
    Description: 4V. Dinamica dei processi pre-eruttivi
    Description: JCR Journal
    Keywords: time-variable microgravimetry ; volcano gravimetry
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: article
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  • 4
    Publication Date: 2021-03-16
    Description: The Nevado del Ruiz volcano is considered one of the most active volcanoes in Colombia, which can potentially threaten approximately 600,000 inhabitants. The existence of a glacier and several streams channelling in some main rivers, flowing downslope, increases the risk for the population living on the flank of the volcano in case of unrest, because of the generation of lahars and mudflows. Indeed, during the November 1985 subplinian eruption, a lahar generated by the sudden melting of the glacier killed twenty thousand people in the town of Armero. Moreover, the involvement of the local hydrothermal system has produced in the past phreatic and phreatomagmatic activity, as occurred in 1989. Therefore, the physico-chemical conditions of the hydrothermal system as well as its contribution to the shallow thermal groundwater and freshwater in terms of enthalpy and chemicals require a close monitoring. The phase of unrest occurred since 2010 and culminated with an eruption in 2012, after several years of relative stability, stillmaintains amoderate alert, as required by the high seismicity and SO2 degassing. In October 2013, a sampling campaign has been performed on thermal springs and stream water, located at 2600–5000 m of elevation on the slope of Nevado del Ruiz, analyzed for water chemistry and stable isotopes. Some of these waters are typically steam-heated (low pH and high sulfate content) by the vapour probably separating from a zoned hydrothermal system. By applying a model of steam-heating, based on mass and enthalpy balances, we have estimated themass rate of hydrothermal steam discharging in the different springs. The composition of the hottest thermal spring (Botero Londono) is probably representative of a marginal part of the hydrothermal system, having a temperature of 250 °C and low salinity (Cl ~1500 mg/l), which suggest, along with the retrieved isotope composition, a chiefly meteoric origin. The vapour discharged at the steam vent “Nereidas” (3600 m asl) is hypothesized to be separated from a high temperature hydrothermal system. Based on its composition and on literature data on fluid inclusions, we have retrieved the P-T-X conditions of the deep hydrothermal system, aswell as its pH and fO2. The vapour feeding Nereidas would separate from a biphasic hydrothermal system characterized by the following parameters: t= 315 °C, P= 15 MPa, NaCl = 10 wt%, CO2=5 wt%, and similar proportion between liquid and vapour. Considering also the equilibria involving S-bearing gases and HCl, pH would approach the value of 1.5 while fO2 would correspond to the FeO-Fe2O3 buffer. Chlorine content is estimated at 10,300mg/l. Changes in the magmatic input into the hydrothermal system couldmodify its degree of vapourization and/or P-T-X conditions, thus inducing corresponding variations in vapour discharges and thermal waters. These findings, paralleled by contemporary measurements of water flow rates, could give significant clues on risk evaluation.
    Description: Published
    Description: 40-53
    Description: 2V. Struttura e sistema di alimentazione dei vulcani
    Description: JCR Journal
    Keywords: Nevado del Ruiz ; Water isotopes ; Geothermal system ; Equilibrium modelling ; Water chemistry ; 04.08. Volcanology ; 03.02. Hydrology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: article
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  • 5
    Publication Date: 2021-03-02
    Description: Since hydrofracking is used for shale gas production, human caused seismicity have become a subject of increasing interest. Seismic monitoring is common for earthquakes generated by human operations like mining, reservoir impoundments, hydrocarbon and geothermal production, as well as reinjection of fluids. In Italy the Mw6.1 Reggio-Emilia earthquake of 20 May 2012 triggered particular interest in anthropogenic seismicity. It also raised the question of whether hydrocarbon exploitation induced variations in crustal stress that influenced the generation of these earthquakes. The Italian government commissioned a technical report compiling cases of documented and hypothesized anthropogenic seismicity. Following a governmental request, a technical report was compiled, describing the relation between anthropogenic activities and induced or triggered seismicity in Italy. This paper reviews these cases, on the basis of previously published works, and additional new analyses. Three cases of seismicity in Central Italy, occurring close to anthropogenic activities, are: (i) extraction of carbon dioxide (CO_2) from a borehole near Pieve Santo Stefano, (ii) the impoundment of the Montedoglio reservoir and (iii) geothermal energy production at Mt. Amiata. Since the sites are situated in the seismically active area of the Northern Apennines, we illustrate both by standard seismological analysis as well as by modeling to tackle the challenge of discriminating anthropogenic from natural seismicity.
    Description: Published
    Description: 80-94
    Description: 5T. Sismologia, geofisica e geologia per l'ingegneria sismica
    Description: JCR Journal
    Keywords: triggered/induced seismicity ; Italy ; CO2 extraction ; reservoir impoundment ; Mt. Amiata ; Upper Tiber Valley ; Solid Earth, Seismology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 6
    Publication Date: 2020-10-13
    Description: Volcanoes hold a fascination for human beings and, before they were recorded by literate observers, eruptions were portrayed in art, were recalled in legend and became incorporated into religious practices: being viewed as agents of punishment, bounty or intimidation depending upon their state of activity and the culture involved. In the Middle East the earliest record dates from the third millennium BCE and knowledge of volcanoes increased progressively over time. In the first century CE written records noted nine volcanoes in the Mediterranean region plus Mount Cameroon in West Africa, yet by 1380 AD the record only totalled 48, with volcanoes in Japan, Indonesia and Iceland being added. After this the list of continued to increase, but important regions such as New Zealand and Hawaii were only added during the last 200 years. Only from 1900 did the rate of growth decline significantly, but it is sobering to recall that in the twentieth century major eruptions have occurred from volcanoes that were considered inactive or extinct, examples including: Mount Lamington—Papua New Guinea, 1951; Mount Arenal—Costa Rica, 1968 and Nyos—Cameroon, 1986. Although there were instances where the human impact of historical eruptions were studied in detail, with examples including the 1883 eruption of Krakatau and 1943–1952 eruption of Parícutin, these were exceptions and before 1980 there was a significant knowledge gap about both the short and long-term effects of major eruptions on societies. Following a global review, this chapter provides a discussion of the ways in which information has been collected, compiled and disseminated from the earliest times until the 1980s in two case study areas: the Azores Islands (Portugal) and southern Italy. In Italy information on eruptions stretches back to prehistoric times and has become progressively better known over more than 2,000 years, yet even here there remain significant gaps in the record even for events that took place between 1900 and 1990. In contrast, located in the middle of the Atlantic, the Azores have been isolated for much of their history and illustrate the difficulties involved in using indigenous sources to compile, not only assessments of impact, but also at a more basic level a complete list of historical events with accurate dates.
    Description: Published
    Description: 1-25
    Description: 1V. Storia eruttiva
    Description: N/A or not JCR
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: book chapter
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  • 7
    Publication Date: 2021-03-19
    Description: Syneruptive gas flux time series can, in principle, be retrieved from satellite maps of SO2 collected during and immediately after volcanic eruptions, and used to gain insights into the volcanic processes which drive the volcanic activity. Determination of the age and height of volcanic plumes are key prerequisites for such calculations. However, these parameters are challenging to constrain using satellite-based techniques. Here, we use imagery from OMI and GOME-2 satellite sensors and a novel numerical procedure based on back-trajectory analysis to calculate plume height as a function of position at the satellite measurement time together with plume injection height and time at a volcanic vent location. We applied this new procedure to three Etna eruptions (12 August 2011, 18 March 2012 and 12 April 2013) and compared our results with independent satellite and ground-based estimations. We also compare our injection height time-series with measurements of volcanic tremor, which reflects the eruption intensity, showing a good match between these two datasets. Our results are a milestone in progressing towards reliable determination of gas flux data from satellite-derived SO2 maps during volcanic eruptions, which would be of great value for operational management of explosive eruptions.
    Description: 1) European Research Council under the European Union's Seventh Framework Programme (FP/2.007-2013)/ERC Grant Agreement no. 279802, project 283 CO2Volc. 2) MEDiterranean SUpersite Volcanoes 280 (MED-SUV) WP 3.3.3
    Description: Published
    Description: 79-91
    Description: 5V. Dinamica dei processi eruttivi e post-eruttivi
    Description: JCR Journal
    Keywords: Volcanic SO2 ; Trajectory modelling ; Remote sensing ; Volcanic tremor ; 04.08. Volcanology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 8
    Publication Date: 2021-06-30
    Description: Volcanic activity exhibits a wide range of eruption styles, from relatively slow effusive eruptions that produce lava flows and lava domes, to explosive eruptions that can inject large volumes of fragmented magma and volcanic gases high into the atmosphere. Although controls on eruption style and scale are not fully understood, previous research suggests that the dynamics of magma ascent in the shallow subsurface (〈 10 km depth) may in part control the transition from effusive to explosive eruption and variations in eruption style and scale. Here we investigate the initial stages of explosive eruptions using a 1D transient model for magma ascent through a conduit based on the theory of the thermodynamically compatible systems. The model is novel in that it implements finite rates of volatile exsolution and velocity and pressure relaxation between the phases. We validate the model against a simple two-phase Riemann problem, the Air-Water Shock Tube problem, which contains strong shock and rarefaction waves. We then use the model to explore the role of the aforementioned finite rates in controlling eruption style and duration, within the context of two types of eruptions at the Soufrière Hills Volcano, Montserrat: Vulcanian and sub-Plinian eruptions. Exsolution, pressure, and velocity relaxation rates all appear to exert important controls on eruption duration. More significantly, however, a single finite exsolution rate characteristic of the Soufrière Hills magma composition is able to produce both end-member eruption durations observed in nature. The duration therefore appears to be largely controlled by the timescales available for exsolution, which depend on dynamic processes such as ascent rate and fragmentation wave speed.
    Description: Published
    Description: 110-139
    Description: 5V. Dinamica dei processi eruttivi e post-eruttivi
    Description: JCR Journal
    Keywords: Magma ascent ; Conduit dynamics ; Soufrière Hills Volcano ; Finite-rate exsolution ; Pressure relaxation ; Velocity relaxation ; 04.08. Volcanology ; Numerical modeling
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 9
    Publication Date: 2019-01-25
    Description: A combined approach merging stable isotopes and fatty acids was applied to study anthropogenic pollution in the Río Negro estuary. Fatty acid markers of vegetal detritus indicated considerable allochthonous inputs at freshwater sites. Correlative evidence of diatom fatty acids, δ13C, chlorophyll and particulate organic matter suggested the importance of diatoms for the autochthonous organic matter production at the river mouth. Low δ15N values (~0�) and high fatty acid 18:1(n-7) concentrations in the suspended particulate matter, in combination with the peaks of coliforms and ammonium, indicated a strong impact of untreated sewage discharge. The 15N depletion was related to oxygen-limited ammonification processes and incorporation of 15N depleted ammonium to microorganisms. This work demonstrates that the combined use of lipid and isotopic markers can greatly increase our understanding of biogeochemical factors and pollutants influencing estuaries, and our findings highlight the urgent need for water management actions to reduce eutrophication.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 10
    Publication Date: 2018-04-03
    Description: Harde (2017) proposes an alternative accounting scheme for the modern carbon cycle and concludes that only 4.3% of today's atmospheric CO2 is a result of anthropogenic emissions. As we will show, this alternative scheme is too simple, is based on invalid assumptions, and does not address many of the key processes involved in the global carbon cycle that are important on the timescale of interest. Harde (2017) therefore reaches an incorrect conclusion about the role of anthropogenic CO2 emissions. Harde (2017) tries to explain changes in atmospheric CO2 concentration with a single equation, while the most simple model of the carbon cycle must at minimum contain equations of at least two reservoirs (the atmosphere and the surface ocean), which are solved simultaneously. A single equation is fundamentally at odds with basic theory and observations. In the following we will (i) clarify the difference between CO2 atmospheric residence time and adjustment time, (ii) present recently published information about anthropogenic carbon, (iii) present details about the processes that are missing in Harde (2017), (iv) briefly discuss shortcoming in Harde's generalization to paleo timescales, (v) and comment on deficiencies in some of the literature cited in Harde (2017).
    Repository Name: EPIC Alfred Wegener Institut
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  • 11
    Publication Date: 2019-02-14
    Description: Mineral ballasting enhances carbon export from the surface to the deep ocean; however, little is known about the role of this process in the ice-covered Arctic Ocean. Here, we propose gypsum ballasting as a new mechanism that likely facilitated enhanced vertical carbon export from an under-ice phytoplankton bloom dominated by the haptophyte Phaeocystis. In the spring 2015 abundant gypsum crystals embedded in Phaeocystis aggregates were collected throughout the water column and on the sea floor at a depth below 2 km. Model predictions supported by isotopic signatures indicate that 2.7 g m−2 gypsum crystals were formed in sea ice at temperatures below −6.5°C and released into the water column during sea ice melting. Our finding indicates that sea ice derived (cryogenic) gypsum is stable enough to survive export to the deep ocean and serves as an effective ballast mineral. Our findings also suggest a potentially important and previously unknown role of Phaeocystis in deep carbon export due to cryogenic gypsum ballasting. The rapidly changing Arctic sea ice regime might favour this gypsum gravity chute with potential consequences for carbon export and food partitioning between pelagic and benthic ecosystems.
    Repository Name: EPIC Alfred Wegener Institut
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  • 12
    Publication Date: 2018-06-14
    Description: Sea-ice ecosystems are among the most extensive of Earth’s habitats; yet its autotrophic and heterotrophic activities remain poorly constrained. We employed the in situ aquatic eddy-covariance (AEC) O2 flux method and laboratory incubation techniques (H14CO3−, [3H] thymidine and [3H] leucine) to assess productivity in Arctic sea-ice using different methods, in conditions ranging from land-fast ice during winter, to pack ice within the central Arctic Ocean during summer. Laboratory tracer measurements resolved rates of bacterial C demand of 0.003–0.166 mmol C m−2 day−1 and primary productivity rates of 0.008–0.125 mmol C m−2 day−1 for the different ice floes. Pack ice in the central Arctic Ocean was overall net autotrophic (0.002–0.063 mmol C m−2 day−1), whereas winter land-fast ice was net heterotrophic (− 0.155 mmol C m−2 day−1). AEC measurements resolved an uptake of O2 by the bottom-ice environment, from ~ − 2 mmol O2 m−2 day−1 under winter land-fast ice to~ − 6 mmol O2 m−2 day−1 under summer pack ice. Flux of O2-deplete meltwater and changes in water flow velocity masked potential biological-mediated activity. AEC estimates of primary productivity were only possible at one study location. Here, productivity rates of 1.3 ± 0.9 mmol O2 m−2 day−1, much larger than concurrent laboratory tracer estimates (0.03 mmol C m−2 day−1), indicate that ice algal production and its importance within the marine Arctic could be underestimated using traditional approaches. Given careful flux interpretation and with further development, the AEC technique represents a promising new tool for assessing oxygen dynamics and sea-ice productivity in ice-covered regions.
    Repository Name: EPIC Alfred Wegener Institut
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  • 13
    Publication Date: 2018-09-20
    Description: Understanding how the Antarctic ice sheet will respond to global warming relies on knowledge of how it has behaved in the past. The use of numerical models, the only means to quantitatively predict the future, is hindered by limitations to topographic data both now and in the past, and in knowledge of how subsurface oceanic, glaciological and hydrological processes interact. Incorporating the variety and interplay of such processes, operating at multiple spatio-temporal scales, is critical to modeling the Antarctic’s system evolution and requires direct observations in challenging locations. As these processes do not observe disciplinary boundaries neither should our future research.
    Repository Name: EPIC Alfred Wegener Institut
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  • 14
    Publication Date: 2018-10-01
    Description: In paleoenvironmental studies, the mineralogical composition of sediments is an important indicator. In combination with other indicators, they contribute to the understanding of changes in sediment sourcing as well as in weathering and depositional processes. Fourier transforminfrared spectroscopy (FTIRS) spectra contain information on mineralogical composition because eachmineral has a unique absorption pattern in the mid-IR range. Although easily obtained, FTIR spectra are often too complex to infermineral concentrations directly. In this study, we use a calibration set of ca. 200 sediment samples conventionally measured using X-ray diffraction (XRD) in order to developmultivariate, partial least squares (PLS) regressionmodels relatingmineral contents to sediment spectra. Good correlations were obtained for the most common minerals (e.g. quartz, K-feldspar, illite, plagioclase, smectite, calcite). Correlation coefficients ranged from 0.85 to 0.92, coefficients for the validation varied from 0.64 to 0.80, the number of latent variables (PLS regression components) in the models ranged between 3 and 7 and the range of variation of the RMSEcv gradient was from 15.28 to 5.7.
    Repository Name: EPIC Alfred Wegener Institut
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  • 15
    Publication Date: 2018-11-12
    Description: The study investigates the in-situ strength of sediments across a plate boundary décollement using drilling parameters recorded when a 1180-m-deep borehole was established during International Ocean Discovery Program (IODP)Expedition 370, Temperature-Limit of the Deep Biosphere off Muroto (T-Limit). Information of the in-situ strength of the shallow portion in/around a plate boundary fault zone is critical for understanding the development of accretionary prisms and of the décollement itself. Studies using seismic reflection surveys and scientific ocean drillings have recently revealed the existence of high pore pressure zones around frontal accretionary prisms, which may reduce the effective strength of the sediments. A direct measurement of in-situ strength by experiments, however, has not been executed due to the difficulty in estimating in-situ stress conditions. In this study, we derived a depth profile for the in-situ strength of a frontal accretionary prism across a décollement from drilling parameters using the recently established equivalent strength (EST) method. At site C0023, the toe of the accretionary prism area off Cape Muroto, Japan, the EST gradually increases with depth but undergoes a sudden change at ~ 800 mbsf, corresponding to the top of the subducting sediment. At this depth, directly below the décollement zone, the EST decreases from ~ 10 to 2 MPa, with a change in the baseline. This mechanically weak zone in the subducting sediments extends over 250 m (~ 800–1050 mbsf), corresponding to the zone where the fluid influx was discovered, and high-fluid pressure was suggested by previous seismic imaging observations. Although the origin of the fluids or absolute values of the strength remain unclear, our investigations support previous studies suggesting that elevated pore pressure beneath the décollement weakens the subducting sediments.
    Repository Name: EPIC Alfred Wegener Institut
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  • 16
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    Nature Publishing Group
    In:  EPIC3Nature Communication, Nature Publishing Group, 9(3178), ISSN: 2041-1723
    Publication Date: 2019-02-13
    Description: Natural dissolved organic matter (DOM) comprises a broad range of dissolved organic molecules in aquatic systems and is among the most complex molecular mixtures known. Here we show, by comparing detailed structural fingerprints of individual molecular formulae in DOM from a set of four marine and one freshwater environments, that a major component of DOM is molecularly indistinguishable in these diverse samples. Molecular conformity was not only apparent by the co-occurrence of thousands of identical molecular formulae, but also by identical structural features of those isomers that collectively represent a molecular formula. The presence of a large pool of compounds with identical structural features in DOM is likely the result of a cascade of degradation processes or common synthetic pathways that ultimately lead to the formation of a universal background, regardless of origin and history of the organic material. This novel insight impacts our understanding of long-term turnover of DOM as the underlying mechanisms are possibly universal.
    Repository Name: EPIC Alfred Wegener Institut
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  • 17
    Publication Date: 2020-03-29
    Description: Most palaeo-deep-water reconstructions are based on geochemical information stored in the calcareous shells of Cibicidoides species but hardly anything is known about their life cycle, population dynamics or ecology. The number of specimens of a single Cibicidoides species can locally be very limited and species may be lacking completely during certain intervals in the geological past. As a consequence, geochemical analyses are often carried out on lumped Cibicidoides spp. assuming that they share the same epizoic to epifaunal habitat and precipitated their shell in comparable offsets to surrounding bottom water mass properties. However, there is a growing body of evidence that particularly Cibicidoides pachyderma and its morphotypes C. mundulus and C. kullenbergi, may not be reliable bottom water recorders. We have recently developed aquaria that allowed, for the first time, observations of Cibicidoides pachyderma var. C. mundulus under in situ pressure and temperature. Experiments were carried out with and without artificial sediments to simulate soft sediments and rocks, respectively. Seawater was set to pH 8 and pH 7.4 to simulate more or less particulate carbon export or more or less ventilation of bottom water. Our experiments demonstrate that C. mundulus may opt for an epifaunal or an infaunal habitat depending on elapsed time following physical disturbance, pH, current activity, the availability of sediments and growth. The specimen's initial response following transfer from atmospheric pressure into the high-pressure aquaria was to immerse into the sediment or to cover more or less parts of the test with aggregated sediments or algae. However, within 24 h a strong rheotaxis became apparent and most specimens moved to sites of increased current activity under normal pH conditions (pH 8). Only few specimens remained in algae cysts or in the sediment in the pH-8 experiment. On the contrary, all specimens under pH 7.4 agglutinated a firm sediment cyst around their test and remained infaunal throughout the experimental period of three months. Independent of pH, growth was only observed in specimens that lived within an agglutinated cyst or infaunal. A solid thick cyst covered the specimens of the pH 7.4 experiment throughout the experiment and possibly restricted water exchange between the in-cyst water and the surrounding artificial bottom water mass. We suggest that a more fragile and possibly more porous sedimentary envelope may, at least temporally, have covered the infaunal specimens under pH 8 but no evidence for this was found upon termination of the experiment.
    Repository Name: EPIC Alfred Wegener Institut
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  • 18
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    Springer
    In:  EPIC3Cham, Springer, 259 p., ISBN: 978-3-319-93284-2
    Publication Date: 2020-06-12
    Description: This open access book presents the proceedings volume of the YOUMARES 8 conference, which took place in Kiel, Germany, in September 2017, supported by the German Association for Marine Sciences (DGM). The YOUMARES conference series is entirely bottom-up organized by and for YOUng MARine RESearchers. Qualified early career scientists moderated the scientific sessions during the conference and provided literature reviews on aspects of their research field. These reviews and the presenters’ conference abstracts are compiled here. Thus, this book discusses highly topical fields of marine research and aims to act as a source of knowledge and inspiration for further reading and research.
    Repository Name: EPIC Alfred Wegener Institut
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  • 19
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    Nature Publishing Group
    In:  EPIC3Nature Protocols, Nature Publishing Group, 13(6), pp. 1310-1330, ISSN: 1754-2189
    Publication Date: 2020-02-23
    Description: Traditionally, the description of microorganisms starts with their isolation from an environmental sample. Many environmentally relevant anaerobic microorganisms grow very slowly, and often they rely on syntrophic interactions with other microorganisms. This impedes their isolation and characterization by classic microbiological techniques. We developed and applied an approach for the successive enrichment of syntrophic hydrocarbon-degrading microorganisms from environmental samples. We collected samples from microbial mat-covered hydrothermally heated hydrocarbon-rich sediments of the Guaymas Basin and mixed them with synthetic mineral medium to obtain sediment slurries. Supplementation with defined substrates (i.e., methane or butane), incubation at specific temperatures, and a regular maintenance procedure that included the measurement of metabolic products and stepwise dilutions enabled us to establish highly active, virtually sediment-free enrichment cultures of actively hydrocarbon-degrading communities in a 6-months to several-years' effort. Using methane as sole electron donor shifted the originally highly diverse microbial communities toward defined mixed cultures dominated by syntrophic consortia consisting of anaerobic methane-oxidizing archaea (ANME) and different sulfate-reducing bacteria. Cultivation with butane at 50 °C yielded consortia of archaea belonging to Candidatus Syntrophoarchaeum and Candidatus Desulfofervidus auxilii partner bacteria. This protocol also describes sampling for further molecular characterization of enrichment cultures by fluorescence in situ hybridization (FISH), and transcriptomics and metabolite analyses, which can provide insights into the functioning of hydrocarbon metabolism in archaea and resolve important mechanisms that enable electron transfer to their sulfate-reducing partner bacteria.
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  • 20
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    Elsevier
    In:  EPIC3Ecological MOdelling, Elsevier, 387, pp. 17-26
    Publication Date: 2020-01-21
    Description: Salpa thompsoni is an important grazer in the Southern Ocean. It is found from the Subtropical Convergence southward to the coastal Antarctic Seas but being most abundant in the Antarctic Polar Frontal Zone. Low temperatures appear to negatively affect their development, limiting their ability to occur in the krill dominated high Antarctic ecosystems. Yet reports indicate that with ocean warming S. thompsoni have experienced a southward shift in their distribution. As they are efficient filter feeders, this shift can result in large-scale changes in the Southern Ocean ecosystem by increasing competitive or predatory interactions with Antarctic krill. To explore salp bloom dynamics in the Southern Ocean a size-structured S. thompsoni population model was developed with growth, consumption, reproduction and mortality rates dependent on temperature and chlorophyll a conditions. The largest uncertainties in S. thompsoni population ecology are individual and population growth rates, with a recent study identifying the possibility that the life cycle could be much shorter than previously considered. Here we run a suite of hypothesis scenarios under various environmental conditions to determine the most appropriate growth rate. Temperature and chlorophyll a were sufficient drivers to recreate seasonal and interannual dynamics of salp populations at two locations. The most suitable growth model suggests that mean S. thompsoni growth rates are likely to be ∼1mm body length d−1, 2-fold higher than previous calculations. S. thompsoni biomass was dependent on bud release time, with larger biomass years corresponding to bud release occurring during favorable environmental conditions; increasing the survival and growth of blastozooids and resulting in higher embryo release. This model confirms that it is necessary for growth and reproductive rates to be flexible in order for the salp population to adapt to varying environmental conditions and provides a framework that can examine how future salp populations might respond to climate change.
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  • 21
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    Elsevier
    In:  EPIC3Encyclopedia of the Anthropocene, Encyclopedia of the Anthropocene, Elsevier, 3, pp. 217-228
    Publication Date: 2020-02-09
    Description: Human influence on the climate system, through greenhouse gas emissions, is clear and climate warming unequivocal. Recent climate change has had widespread impacts on natural systems including shifts in the ranges (distributions) of land, freshwater, and marine organisms. Effects of these biogeographical shifts transcend single-species to impact on ecosystem goods and services resulting in significant social and economic costs to human communities. In this article we provide a general overview of these factors by reviewing current evidence from terrestrial, freshwater, and marine ecosystems.
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  • 22
    Publication Date: 2020-02-12
    Description: The construction of high capacity data sharing networks to support increasing government and commercial data exchange has highlighted a key roadblock: the content of existing Internet-connected information remains siloed due to a multiplicity of local languages and data dictionaries. This lack of a digital lingua franca is obvious in the domain of human food as materials travel from their wild or farm origin, through processing and distribution chains, to consumers. Well defined, hierarchical vocabulary, connected with logical relationships—in other words, an ontology—is urgently needed to help tackle data harmonization problems that span the domains of food security, safety, quality, production, distribution, and consumer health and convenience. FoodOn (http://foodon.org) is a consortium-driven project to build a comprehensive and easily accessible global farm-to-fork ontology about food, that accurately and consistently describes foods commonly known in cultures from around the world. FoodOn addresses food product terminology gaps and supports food traceability. Focusing on human and domesticated animal food description, FoodOn contains animal and plant food sources, food categories and products, and other facets like preservation processes, contact surfaces, and packaging. Much of FoodOn’s vocabulary comes from transforming LanguaL, a mature and popular food indexing thesaurus, into a World Wide Web Consortium (W3C) OWL Web Ontology Language-formatted vocabulary that provides system interoperability, quality control, and software-driven intelligence. FoodOn compliments other technologies facilitating food traceability, which is becoming critical in this age of increasing globalization of food networks.
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  • 23
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    Springer
    In:  EPIC3Handbook on Marine Environment Protection, Handbook on Marine Environment Protection, Berlin, Springer, 1024 p., pp. 463-485, ISBN: 978-3-319-60154-0
    Publication Date: 2018-07-23
    Description: Underwater sound is ubiquitous throughout the world’s oceans. Evaluating its impact and relevance for the marine fauna is highly complex and hampered by a paucity of data, lack of understanding and ambiguity of terms. When comparing sound (an energetic pollutant) with substantial pollutants (chemical, biological or marine litter) two notable differences emerge: Firstly, while sound propagates instantaneously away from the source, it also ceases immediately within minutes of shutting off the source. Anthropogenic noise is hence per-se ephemeral, lending itself to a set of in-situ mitigation strategies unsuitable for mitigation of persistent pollutants. Secondly, while pollution with hazardous substances can readily be described quantitatively with few parameters (environmental concentration as the most important one), the description of sound and its impact on aquatic life is of much higher complexity, as to be evidenced by the issues multifaceted description following hereinafter.
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  • 24
    Publication Date: 2019-04-11
    Description: This study forms part II of two papers describing ECHAM6-FESOM, a newly established global climate model with a unique multi-resolution sea ice-ocean component. While part I deals with the model description and the mean climate state, here we examine the internal climate variability of the model under constant present-day (1990) conditions. We (1) assess the internal variations in the model in terms of objective variability performance indices, (2) analyze variations in global mean surface temperature and put them in context to variations in the observed record, with particular emphasis on the recent warming slowdown, (3) analyze and validate the most common atmospheric and oceanic variability patterns, (4) diagnose the potential predictability of various climate indices, and (5) put the multi-resolution approach to the test by comparing two setups that differ only in oceanic resolution in the equatorial belt, where one ocean mesh keeps the coarse ~1° resolution applied in the adjacent open-ocean regions and the other mesh is gradually refined to ~0.25°. Objective variability performance indices show that, in the considered setups, ECHAM6-FESOM performs overall favourably compared to five well-established climate models. Internal variations of the global mean surface temperature in the model are consistent with observed fluctuations and suggest that the recent warming slowdown can be explained as a once-in-one-hundred-years event caused by internal climate variability; periods of strong cooling in the model (‘hiatus’ analogs) are mainly associated with ENSO-related variability and to a lesser degree also to PDO shifts, with the AMO playing a minor role. Common atmospheric and oceanic variability patterns are simulated largely consistent with their real counterparts. Typical deficits also found in other models at similar resolutions remain, in particular too weak non-seasonal variability of SSTs over large parts of the ocean and episodic periods of almost absent deep-water formation in the Labrador Sea, resulting in overestimated North Atlantic SST variability. Concerning the influence of locally (isotropically) increased resolution, the ENSO pattern and index statistics improve significantly with higher resolution around the equator, illustrating the potential of the novel unstructured-mesh method for global climate modeling.
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  • 25
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    In:  EPIC3Boundary Layer Meteorol., Springer, 166, pp. 301-325
    Publication Date: 2019-02-15
    Description: In climate and weather prediction models the near-surface turbulent fluxes of heat and momentum and related transfer coefficients are usually parametrized on the basis of Monin–Obukhov similarity theory (MOST). To avoid iteration, required for the numerical solution of the MOST equations, many models apply parametrizations of the transfer coefficients based on an approach relating these coefficients to the bulk Richardson number Rib.However, the parametrizations that are presently used in most climate models are valid only for weaker stability and larger surface roughnesses than those documented during the Surface Heat Budget of the Arctic Ocean campaign (SHEBA). The latter delivered a well-accepted set of turbulence data in the stable surface layer over polar sea-ice. Using stability functions based on the SHEBA data, we solve the MOST equations applying a new semi-analytic approach that results in transfer coefficients as a function of Rib and roughness lengths for momentum and heat. It is shown that the new coefficients reproduce the coefficients obtained by the numerical iterative method with a good accuracy in the most relevant range of stability and roughness lengths. For small Rib , the new bulk transfer coefficients are similar to the traditional coefficients, but for large Ri b they are much smaller than currently used coefficients. Finally, a possible adjustment of the latter and the implementation of the new proposed parametrizations in models are discussed.
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  • 26
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    In:  EPIC3Global Ecology and Oceanography of Harmful Algal Blooms, Global Ecology and Oceanography of Harmful Algal Blooms, Springer, 16 p., pp. 187-203, ISBN: 978-3-319-7006
    Publication Date: 2018-06-23
    Description: Coastal systems partially surrounded by land such as coastal embayments, estuaries and fjords have characteristics that affect the development of harmful algal blooms. Among these, shallow water depths and geophysical constraints from surrounding land masses favour stronger links between the water column and bottom sediments. Typical circulation patterns (e.g., in estuaries) can limit the exchange with offshore waters and favour cell retention. Sub-mesoscale and high-frequency processes are particularly important physical factors that influence pattern and persistence of HABs in coastal systems. Coupling with benthic nutrient fluxes or seed banks from the bottom is enhanced as the degree of physical robustness of coastal systems decreases. The links between bottom cyst distribution patterns and intensity or extension of HABs are still not fully understood. The importance of intra-specific diversity has been highlighted for many HAB species but tools are needed to assist in situ identification of these various life cycle stages. Alternative metabolic strategies, such as mixotrophy or reliance on organic nutrients and allelochemically mediated species interactions, can play a critical role in the development of HA blooms particularly in semi-confined coastal environments. Future work should address the influence of climate change and of coastal aquaculture on blooms of these harmful species in coastal environments.
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  • 27
    Publication Date: 2019-10-04
    Description: An integrative inventory of the amphipod scavenging fauna (Lysianassoidea), combining morphological identifications with DNA barcoding, is provided here for the Filchner area situated in the south-eastern Weddell Sea. Over 4400 lysianassoids were investigated for species richness and relative abundances, covering 20 different stations and using different sampling devices, including the southernmost baited traps deployed so far (76°S). High species richness was observed: 29 morphospecies of which 5 were new to science. Molecular species delimitation methods were carried out with 109 cytochrome c oxidase I gene (COI) sequences obtained during this study as well as sequences from specimens sampled in other Antarctic regions. These distance-based analyses (trees and the Automatic Barcode Gap Discovery method) indicated the presence of 42 lineages; for 4 species, several (cryptic) lineages were found. More than 96% of the lysianassoids collected with baited traps belonged to the species Orchomenella pinguides s. l. The diversity of the amphipod scavenger guild in this ice-bound ecosystem of the Weddell Sea is discussed in the light of bottom–up selective forces. In this southernmost part of the Weddell Sea, harbouring spawning and nursery grounds for silverfish and icefishes, abundant fish and mammalian food falls are likely to represent the major food for scavengers. Finally, the importance of biodiversity surveys in the context of the establishment of a marine protected area in this region (Weddell Sea MPA) is highlighted and how future studies can contribute to a better understanding the ecological role of scavengers in this system is discussed.
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  • 28
    Publication Date: 2018-02-26
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  • 29
    Publication Date: 2018-06-05
    Description: Fossil carbonate skeletons of marine organisms are archives for understanding the development and evolution of palaeo-environments. However, the correct assessment of past environment dynamics is only possible when pristine skeletons and their biogenic characteristics are unequivocally distinguishable from diagenetically-alteredskeletal elements and non-biogenic features. In this study, we extend our work on diagenesis of biogenic aragonite (Casella et al. 2017) to the investigation of biogenic low-Mg calcite using brachiopod shells. We examined and compared microstructural characteristics inducedby laboratory-based alteration to structural features derived from diagenetic alteration in natural environments. We used four screening methods: cathodoluminescence (CL), cryogenic and conventional field emission-scanning electronmicroscopy (FE-SEM), atomic force microscopy (AFM) and electron backscatter diffraction (EBSD).We base our assessments of diagenetic alteration and overprint on measurements of, a) images of optical overprint signals, b) changes in calcite crystal orientation patterns, and c) crystal co-orientation statistics. According to the screening process, altered and overprinted samples define two groups. In Group 1 the entire shell is diagenetically overprinted, whereas in Group 2 the shell contains pristine as well as overprinted parts. In the case of Group 2 shells, alteration occurred either along the periphery of the shell including the primary layer or at the interior-facing surface of the fibrous/columnar layer. In addition, we observed an important mode of the overprinting process, namely the migration of diagenetic fluids through the endopunctae corroborated by mineral formation and overprinting in their immediate vicinity, while leaving shell parts between endopunctae in pristine condition. Luminescence (CL) and microstructural imaging (FE-SEM) screening give first-order observations of the degree of overprint as they cover macro-to micron scale alteration features. For a comprehensive assessment of diagenetic overprint these screening methods should be complemented by screening techniques such as EBSD and AFM. They visualise diagenetic changes at submicron and nanoscale levels depicting the replacement of pristine nanocomposite mesocrystal biocarbonate (NMB) by inorganic rhombohedral calcite (IRC). The integration of screening methods allows for the unequivocal identification of highly-detailed alteration features as well as an assessment of the degree of diagenetic alteration.
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  • 30
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    Springer
    In:  EPIC3Handbook on Marine Environment Protection, Cham, Switzerland, Springer, 21 p., pp. 353-373, ISBN: 978-3-319-60156-4
    Publication Date: 2018-02-09
    Description: In this chapter, the effects of temperature change—as a main aspect of climate change—on marine biodiversity are assessed. Starting from a general discussion of species responses to temperature, the chapter presents how species respond to warming. These responses comprise adaptation and phenotypic plasticity as well as range shifts. The observed range shifts show more rapid shifts at the poleward range edge than at the equator-near edge, which probably reflects more rapid immigration than extinction in a warming world. A third avenue of changing biodiversity is change in species interactions, which can be altered by temporal and spatial shifts in interacting species. We then compare the potential changes in biodiversity to actual trends recently addressed in empirical synthesis work on local marine biodiversity, which lead to conceptual issues in quantifying the degree of biodiversity change. Finally we assess how climate change impacts the protection of marine environments.
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  • 31
    Publication Date: 2018-12-05
    Description: We study the basement configuration in the slow-spreading Eurasia Basin, Arctic Ocean. Two multichannel seismic (MCS) profiles, which we acquired during ice-free conditions with a 3600 m long streamer, image the transition from the North Barents Sea Margin into the southern Eurasia Basin. The seismic lines resolve the up to 5000 m thick sedimentary section, as well as the crustal architecture of the southern Eurasia Basin along 120 km and 170 km, respectively. The seismic data show large faulted and rotated basement blocks. Gravity modeling indicates a thin basement with a thickness of 1–3 km and a density of 2.8*103 kg/m3 between the base of the sediments and the top of the mantle, which indicates exhumed and serpentinized mantle. The Gakkel spreading ridge, located in northern prolongation of the seismic lines is characterized by an amagmatic or sparsely magmatic segment. From the structural similarity between the basement close to the ultra-slow spreading ridge and our study area, we conclude that the basement in the Eurasia Basin is predominantly formed by exhumed and serpentinized mantle, with magmatic additions. An initial strike-slip movement of the Lomonosov Ridge along the North Barents Sea Margin and subsequent near-orthogonal opening of the Nansen Basin is supposed to have brought mantle material to the surface, which was serpentinized during this process. Continuous spreading thinned the serpentinized mantle and subsequent normal faulting produced distinct basement blocks. We propose that mantle exhumation has likely been active since the opening of the Eurasia Basin.
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  • 32
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    Springer
    In:  EPIC3Building Bridges at the Science-Stakeholder Interface, Building Bridges at the Science-Stakeholder Interface, Springer, 133 p., pp. 73-78, ISBN: 978-3-319-75919-7
    Publication Date: 2019-08-15
    Repository Name: EPIC Alfred Wegener Institut
    Type: Inbook , peerRev , info:eu-repo/semantics/other
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  • 33
    Publication Date: 2019-04-17
    Description: In fall 1995, during a survey in Abrolhos coral reef system (southwestern Atlantic, Brazil), significant densities (143–6174 cells L-1) of small thecate dinoflagellates were detected. Analysis of this material in scanning and transmission electron microscopy confirmed the presence of four taxa assigned to the potentially toxic genus Azadinium: A. dexteroporum Percopo et Zingone, A. luciferelloides Tillmann et Akselman, A. cf. polongum Tillmann and Azadinium sp. The latter taxon showed external morphological features quite distinct from any Azadinium taxon yet described, but its formal description as a new species depends on more detailed analysis. Species of Azadinium have never been confirmed in Brazilian waters until now, although the toxins produced by these dinoflagellates, the azaspiracids, have been detected in Brazilian southern coast without recognition of their producing organisms. The highest densities of Azadinium spp. occurred at stations south of and over the Abrolhos Bank, which receive higher nutrient concentrations due to upwelling of deep and nutrient-rich water masses.
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  • 34
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    Elsevier
    In:  EPIC3Deep Sea Research Part II: Topical Studies in Oceanography, Elsevier, 149, pp. 25-30, ISSN: 09670645
    Publication Date: 2018-06-19
    Description: The deep basins of the Bransfield Strait (BS) are ventilated by Weddell Sea (WS) waters from different origins. Depending on the source and density, these water masses follow different routes across the complex topography near the tip of the Antarctic Peninsula and thus into the Bransfield Strait abyss. Using a global setup of the Finite Element Sea-ice Ocean Model (FESOM) we show that the WS waters found at the western WS continental shelf break have a higher influence on the short period variability of BS bottom waters than the waters present over the continental shelf. Adding passive tracers to the glacial melt water (GMW) from two different origins, Larsen Ice Shelf (LIS) and Filchner-Ronne Ice Shelf (FRIS), we show that the GMW from FRIS has a larger influence on BS bottom waters than the GMW from LIS. FRIS GMW has a higher concentration in the BS eastern basin, while LIS GMW is more abundant in the BS central basin. This duality mainly leads to the difference between BS central and eastern basins seen on the observations. This is a novel result and we believe is a significant contribution to the understanding of the BS-WS circulation and interactions.
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  • 35
    Publication Date: 2018-06-27
    Description: This study focusses on the last glacial–deglacial–Holocene spatial and temporal variability in sea-ice cover based on organic geochemical analyses of marine sediment cores from the subarctic Pacific and the Bering Sea. By means of the sea-ice proxy “IP25” and phytoplankton-derived biomarkers (specific sterols and alkenones), we reconstruct the spring sea-ice conditions, (summer) sea-surface temperature (SST) and primary productivity, respectively. The large variability of sea ice was explained by a combination of local and global factors, such as solar insolation, global climate anomalies and sea-level changes controlling the oceanographic circulation and water mass exchange between the subarctic Pacific and the Bering Sea. During the Last Glacial Maximum, extensive sea-ice cover prevailed over large part of the subarctic Pacific and the Bering Sea. The following deglaciation is characterized by a rapid sea-ice advance and retreat. During cold periods (Heinrich Stadial 1 and Younger Dryas) seasonal sea-ice cover generally coincided with low alkenone SSTs and low primary productivity. Conversely, during warmer intervals (Bølling/Allerød, Early Holocene) reduced sea-ice or ice-free conditions prevailed in the study area. At the northern Bering Sea continental shelf a late-Early/Mid Holocene shift to marginal sea-ice conditions is in line with the simultaneous wide-spread sea-ice recovery observed in the other Arctic marginal seas and is likely initiated by the lower Northern Hemisphere insolation and surface-water cooling.
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  • 36
    Publication Date: 2018-09-04
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  • 37
    Publication Date: 2018-09-28
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  • 38
    Publication Date: 2021-04-25
    Keywords: 551 ; VKB 350 ; 38.20
    Language: English
    Type: anthologyArticle , publishedVersion
    Format: 186-209
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  • 39
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    Springer | Berlin [u.a.]
    Publication Date: 2021-04-25
    Description: Colonial non-zooxanthellate corals from deep-water coral reefs, Lophelia pertusa and Madrepora oculata, produce large amounts of extracellular mucus (EMS). This mucus has various functions, e.g., an antifouling capability protecting the coral skeleton from attacks of endolithic and boring organisms. Both corals show thick epithecal and exothecal skeletal parts with a clear lamellar growth pattern. The formation of the epitheca is unclear. It is supposed that the EMS play a central role during the calcification process of the epithecal skeletal parts. Staining with the fluorochrome tetracycline has shown an enrichment of Ca2+ ions in the mucus. In order to investigate this hypothesis, the protein content of the mucus and the intracrystalline organic matter from newly formed epithecal aragonite of Madrepora oculata was determined via sodium dodecyl sulfate (SDS) gel electrophoresis. Identical band patterns within both substances could be detected, one around 45 kDa molecular weight and a cluster around 30-35 kDa molecular weight. The occurrence of identical protein patterns within the mucus and in the newly formed aragonite confirms the idea that the mucus plays an important role during the organomineralization of the coral epitheca.
    Keywords: 551 ; VU 000 ; 38.20
    Language: English
    Type: anthologyArticle , publishedVersion
    Format: 731-744
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  • 40
    Publication Date: 2021-03-29
    Description: The incorporation of hydrogen in enstatite in a hydrous system containing various amounts of NaCl was investigated at 25 kbar. The hydrogen content in enstatite shows a clear negative correlation to the NaCl-concentration in the system. The most favourable explanation is the reduction of water fugacity due to dilution. Other reasons for the limited hydrogen incorporation at high NaCl levels, such as a significant influence of Na+ on the defect chemistry or an exchange between OH- and Cl-in enstatite, appear much less important. A partition coefficient D Na En/Fluid = 0.0013 could be determined, demonstrating that Na is less incompatible in enstatite than H. The new results support the idea that dissolved components have to be considered when the total hydrogen storage capacity in nominally anhydrous minerals is estimated, especially in geological settings with high levels of halogens, such as subduction zones.
    Keywords: KEnstatite; Hydrogen incorporation;Water activity; Sodium; Chlorine ; 551
    Language: English
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  • 41
    Publication Date: 2021-03-29
    Description: The coprecipitation of U (VI) with iron corrosion products from aqueous solutions by zero valent iron was investigated. The evidence of coprecipitation was demonstrated by conducting experiments with well characterized scrap iron,pyrite and a mixture of both materials with experimental durations of up to four months. Results indicate that under anoxic conditions only less than one tenth of the immobilized U(VI) was associated with the surface of scrap iron, whereas theremaining amount is entrapped in aging corrosion products.
    Keywords: 551
    Language: English
    Type: anthologyArticle , acceptedVersion
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  • 42
    Publication Date: 2018-03-08
    Description: This contribution proposes a cautious way of constructing the susceptibility classes obtained from favourability modeling of landslide occurrences. It is based on the ranks of the numerical values obtained by the modelling. Such ranks can be displayed in the form of histograms, cumulative curves, and prediction patterns resembling maps. A number of models have been proposed and in this contribution the following will be compared in terms of their respective rankings for equal area classes: fuzzy set function, empirical likelihood ratio, linear and logistic regression, and Bayesian prediction function. The analyses performed and contrasted exemplify a generalized methodology for comparing predictions that should allow evaluating prediction patterns from any model. Unfortunately, many applications in the scientific literature use methods of characterizing prediction quality that make comparison hard or impossible. A database from a study area in the Mountain Community of Tirano in Valtellina, Lombardy Region, northern Italy, is used to illustrate how the results of the different models and strategies of analysis show the relevance of the properties of the database over those of the models.
    Description: Published
    Description: 1135-1144
    Description: 2TR. Ricostruzione e modellazione della struttura crostale
    Keywords: Landslide susceptibility, spatial support, spatial relationships, prediction models, prediction patterns, target pattern, ranked classes, cross-validation, database signature ; 04.04. Geology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: book chapter
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  • 43
    Publication Date: 2018-03-08
    Description: Which are the trends that are transforming research management and how do research organizations respond to these changes? What are the available services to support research during EC projects’ life-cycles? Are there research information systems in use and to which extent are they integrated? The paper is structured as follows: a survey conducted over a sample of universities and research centers in Italy is presented in section 2. Section 3 describes significant case studies. Section 4 illustrates mobility figures and trends in EU funded projects. Section 5 concludes with considerations about trends and suggestions for improvement.
    Description: Published
    Description: 309-314
    Description: 7TM. Sviluppo e Trasferimento Tecnologico
    Description: N/A or not JCR
    Keywords: Research support services ; CRIS ; research information management ; Human Resources Strategy for Researchers
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 44
    Publication Date: 2018-04-06
    Description: The EOS-1 Terra ASTER (Advanced Spaceborne Thermal Emission and Reflection Radiometer) has acquired about 200 images (100 of them sufficiently cloud-free to be used) over Mt. Etna since 1999. This chapter shows the results from the analysis of 10 years Mt Etna activity using thermal infrared (TIR) high spatial resolution data by a semi-automatic procedure that extracts radiance values of the summit area with the goal of detecting variation related to eruptive events. Night time data showed a good correlation with the main eruptive events that occurred both in the summit and in the flank areas. A comparison of the variance of maximum ASTER TIR radiance with variance of the maximum AVHRR TIR radiance (Advanced Very High Resolution Radiometer) for the same area confirms good correlation in terms of trend and values between the two data sets. Finally this study emphasizes the importance of high spatial resolution TIR data during background monitoring to detect changes in the thermal emission that may be related to an impending eruption and the need to further improve the spatial resolution in the TIR channels to better separate the thermal active areas in volcanic systems.
    Description: Published
    Description: 409-428
    Description: 5V. Dinamica dei processi eruttivi e post-eruttivi
    Description: 2SR. VULCANI - Servizi e ricerca per la Società
    Description: 5IT. Osservatori
    Keywords: Remote sensing observation, volcano monitoring ; 04. Solid Earth::04.08. Volcanology::04.08.99. General or miscellaneous
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: book chapter
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  • 45
    Publication Date: 2018-03-26
    Description: At Vulcano (Aeolian Islands, Italy), different measurement methods have been developed for more than 30 years and models were formulated to account for the real time evolution of the actual solphataric activity. The results of a long term monitoring of surface temperature and of CO2 flux from soil, reviewed in a multidisciplinary framework, are presented here. These two parameters, monitored at the ground surface, highlighted local variations of the hydrothermal release and the time series of data showed in several instances, different range of values. The background and anomalous ranges defined by this long term monitoring are robust by a statistical point of view. The long term data-series offered a useful tool to verify conceptual framework and to better define the natural hazard evaluation integrating “classical” and “new” investigation techniques. Moreover, La Fossa area lays in a geodynamic context with active seismo- tectonic processes, frequently perturbing the pressure field of the hydrothermal system under investigation. Any perturbation in the pressure state variable (P) of the system, results in an excited state of its components and a relevant transfer of energy and mass towards the surface starts to counterbalance the perturbation. The continuous monitoring of surface temperature reveals the effects of the forces guiding the heat flows whereas the space variation of temperature indicates the rising paths of hydrothermal and magmatic fluids. The occurrence of new fumaroles and mofetes, or even changing emission rates of fluids by these vents, rises questions about the evolution of the equilibrium state of buried hydrothermal system, or about changing physical condition of overburden rocks. The conceptual framework suggesting the potential of our time series of field data is that a rock body, can be seen as a multiphase geochemical system where the fluid phases play a crucial role in defining the physical changes of the body and its response to the different forces acting on it. The changes of pore pressure depend on the balance between gas phases production and gas leaked out from a geochemical system. Analyses of fluxes at the system boundaries can give information on the equilibrium of the interacting geospheres. Even if playing variables are too many, some specific compounds and parameters can be selected as indicators of the state of the system.#
    Description: Published
    Description: Yokohama, Japan
    Description: 4V. Dinamica dei processi pre-eruttivi
    Keywords: Long term monitoring ; Vulcano ; Fluid geochemistry
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: Conference paper
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  • 46
    facet.materialart.
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    Springer
    Publication Date: 2018-02-16
    Description: No abstract
    Description: Published
    Description: 6A. Geochimica per l'ambiente
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: book chapter
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  • 47
    Publication Date: 2018-02-19
    Description: No abstract
    Description: Published
    Description: 6A. Geochimica per l'ambiente
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: book
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  • 48
    Publication Date: 2018-03-16
    Description: In this paper, we analyze the tropospheric delay observed on some ground-based CGPS stations in a dense small regional network and its time evolution during extreme weather conditions. In particular, we studied two severe weather events occurring in the Campanian Region (Italy) on October 12, 2012 and December 2, 2014, reaching 42 and 28 mm rainfall during about 1 h at Naples (MAFE) and Gragnano (GRAG) stations respectively. The main concern of this study is the retrieval of the precipitable water (PW) from co-located GPS and meteorological stations. We investigate the correlation between PW and rain amount at ground level. We analyse phase residuals for each visible GPS satellite using sky plots of the phase residuals along the GPS satellites tracks, showing that the two phenomena are shown in the phase residual plots. Moreover, we compare PWdata retrieved from observed meteorological data and from models (GPT2 and ECMWF), evidencing that there is a need for co-located CGPS and weather stations to improve the assessment of water content in the troposphere.
    Description: Published
    Description: 293-302
    Description: 4A. Oceanografia e clima
    Description: 7A. Geofisica per il monitoraggio ambientale e geologia medica
    Keywords: Precipitable water ; Tropospheric delay ; GPT2 ; ECMWF ; GPS ; 01.01. Atmosphere
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: book chapter
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  • 49
    Publication Date: 2018-03-02
    Description: The action of using someone else’s production, ideas, or research without acknowledging the source and then claiming credit for them is known as plagiarism. Plagiarism is in principle a moral offense; it is not always an illegal action but certainly is an ethical complex case. Copying without permission or stealing someone else’s work violates the standard codes of scholarly conduct and ethical behavior in professional scientific research. Science may be somewhat more prone to plagiarism in that scholars exchange ideas and proposals more frequently than artists, for example. Workshops, scientific meetings, and round tables are places where primitive and preliminary researches are presented and discussed before their official presentation. This chapter discusses plagiarism and self plagiarism and tries to point out the role of the scientific community toward this kind of scientific misconduct.
    Description: Published
    Description: 5TM. Informazione ed editoria
    Keywords: Copyright infringement, Ethical conduct, Plagiarism. ; 05.03. Educational, History of Science, Public Issues
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: book chapter
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  • 50
    Publication Date: 2018-02-16
    Description: Among the considerable number of studies that can be carried out using muons, we pay specific attention to the radiography of volcanoes based on the same principle of the X-ray radiography of human body. Thanks to their high penetration capability, cosmic-ray muons can be used to reconstruct the density distribution of the interior of huge structures by measuring the attenuation induced by the material on the muon flux. In particular, the quantitative understanding of the inner structure of volcanoes is a key-point to forecast the dangerous stages of activity and mitigate volcanic hazards. The instrumental approach is currently based on the detection of muons crossing hodoscopes made up of scintillator planes. Unfortunately, these detectors are affected by a strong background comprised by accidental coincidence of vertical shower particles, horizontal high-energy electrons and upward going particles. We propose an alternative technique based on the detection of the Cherenkov light produced by muons. This can be achieved with an imaging atmospheric Cherenkov telescope composed of a high reflectivity optical system that focus the Cherenkov light onto a multi-pixel focal camera with fast read-out electronics. The Cherenkov light emitted by a muon is imaged on the camera as an annular pattern which contains information to reconstruct the direction of the incident muon. We have estimated that using the Cherenkov imaging technique for muon radiography of volcanoes gives the advantage of a negligible background and improved spatial resolution, compared to the majority of the particle detectors. We present results of simulations based on a telescope with a positioning resolution of 13.5 m which corresponds to an acceptance of 9 cm2 sr. The telescope is located 1500 m far from a toy-model volcano, namely, a cone with a base diameter of 500 m and a height of 240 m. We test the feasibility of the proposed method by estimating the minimum number of observation nights needed to resolve inner empty conduits of different diameter.
    Description: Published
    Description: 122–125
    Description: 2V. Struttura e sistema di alimentazione dei vulcani
    Description: N/A or not JCR
    Keywords: Imaging Atmospheric Cherenkov Telescope ; Volcano radiography ; Muons, ; Volcano monitoring ; Mount Etna
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 51
    Publication Date: 2018-03-19
    Description: The importance of historical earthquake data is largely recognized by both seismologists and engineers, who use such data in a wide range of applications. At the European-Mediterranean scale, several databases dealing with historical earthquake data – mostly intensity data points – exist and are constantly maintained and updated, as well as national earthquake catalogues. In addition, a number of studies on historical earthquakes are published every year. Most of these activities are being performed at a national scale, depending on each country’s needs, and according to diverse methodologies. As a result, the earthquake history of Europe is today fragmented in a puzzle of different, only partially overlapping sets of data, which, at the continent scale, are not homogeneously collected and interpreted. This situation is particularly evident in the frontier areas, where historical earthquakes are often interpreted in a conflicting and/or partial way by the catalogues of the bordering countries. In addition, the background information upon which several historical catalogues are built is not published or not easily accessible. In recent years, a major effort was made to bridge over these gaps, by establishing cooperation among existing national databases, and creating new ones according to common standards. Particular attention was devoted to retrieve the earthquake background information, that is, the results of historical earthquake investigation in terms of a paper, a report, a book chapter, a map, etc. As most of the information on an historical earthquake can be summarized in a set of Macroseismic Data Points (MDPs) – i.e. a list of localities (name and coordinates) with a macroseismic intensity assessment and the related macroseismic scale – a dedicated effort was addressed to make such data publicly available. The described activities resulted in the European Archive of Historical Earthquake Data (AHEAD). The Archive is conceived as a pan-European common and open platform supporting the research activities in the field of historical seismology by (i) tracing back, preserving and granting access to the sources of data on the earthquake history of Europe (papers, reports, MDPs, and catalogues), and (ii) establishing relations among these data. AHEAD inventories multiple sets of information concerning each European earthquake in the time-window 1000–1899. The AHEAD web portal (http://www.emidius.eu/AHEAD/) gives access, as of today, to 4,722 earthquakes and the related background information as provided by 338 data sources. All these data can be queried by earthquake and by study, through a user-friendly web-interface. The distinguishing feature of AHEAD is to grant access not only to one study, but to all the available (published) data sources dealing with each individual earthquake, allowing researchers to take into account the different point of views and interpretations.
    Description: Published
    Description: 359-369
    Description: 3T. Storia Sismica
    Description: 4T. Sismologia, geofisica e geologia per l'ingegneria sismica
    Description: 4IT. Banche dati
    Keywords: historical seismology ; seismicity ; historical earthquakes ; 04.06. Seismology ; 05.02. Data dissemination
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: book chapter
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  • 52
    Publication Date: 2018-03-26
    Description: We present soil temperature data from a peripheral fumarole emission of Mt Etna at the top end of a radial fracture called Bottoniera. This area lies in the northern flank of the volcano (2,500m a.s.l.), and was interested by fissure eruption during 2002/2003. In the steam heated soil lying around the fumarole release, a shallow vertical profile has been monitored from October 2009 to September 2012. We estimated the local surface heat flux and compared its time variations to the eruptive activity occurred during the monitoring period. The eruptive vents were located on the opposite flank, (〉3200m a.s.l.), far about 4km. The heat flux from this peripheral emission has been highly influenced by the eruptive activity. Its time variations are correlated to the variable rates of products emitted from January 2011 to April 2012. Different ranges of heat flux values have been associated to the pre-eruptive phase, to the productive eruption period and to the end of this eruptive cycle. The decrease of heat flux was registered before the end of the eruptive cycle. The continuous thermal monitoring revealed in real time that ascending magma through the active conduits is the heating bottom source of the heat flux dispersed by a complex network of active fractures present in this area. The recorded data suggest the steam heated soil around fumaroles vents as a possible new investigation field for a low cost monitoring of the local variation in the structural weakness of the apparatus. Extending this thermal monitoring to the other steaming grounds of this complex volcanic system we could also follow variations of the fluid circulation paths and obtain direct information about local pore pressure changes. A multivariate analysis of recorded data could suggest, which part of this complex apparatus is being involved, time by time, with the ongoing evolution. It would contribute to the evaluation of flank instability caused by physical changes occurring on the network of active fractures, and inferred by multidisciplinary investigations (such as deformation patterns, tectonic lineaments and geochemical features of underground waters and diffuse gas emissions).
    Description: Published
    Description: Yokohama, Japan
    Description: 4V. Dinamica dei processi pre-eruttivi
    Description: 5V. Dinamica dei processi eruttivi e post-eruttivi
    Keywords: Fumaroles ; Steam heated Soil ; Thermal monitoring ; Eruptive cycle ; Fluid geochemistry
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: Conference paper
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  • 53
    Publication Date: 2019-03-26
    Description: The shallow vertical temperature profile has been measured in the proximity of an eruptive fissure far about 4 km north-northeast from Mt. Etna central craters. The monitoring site was a steam-heated soil lying between a group of flank fractures on the upper northeast flank of Mt. Etna (Italy), i.e., on the northeast rift. We chose this area because it was close to an eruptive fissure, that opened in 2002 and extended from about 2500 to about 1500 m a.s.l., with our aim being to determine a connection between this fracture system and the ongoing volcanic activity. Heat flux anomalies from the ground from September 2009 to September 2012 were evaluated. Changes in the hydrothermal release—which can be related to variations in volcanic activity—are discussed and compared to the published geophysical data. The heat flux ranges varied during the pre-eruptive (from about 7 to 38 W×m−2), syn-eruptive (from about 3 to 49W×m−2), and post-eruptive phases, with the heat released being lowest at the latter phase (from about 1 to 20 W×m−2). Moreover, the heat flux time variation was strongly correlated with the eruption rate from the new southeast crater between January 2011 and April 2012. The migration of magma through active conduits acts as a changing heating source for steam-heated soils located above the active fractures. Our findings suggest that tracking the heat flux above active fractures constitutes a useful investigation field for low-cost thermal monitoring of volcanic activity. Time variations in their emissions could highlight the relationship between a hydrothermal circuit and the local network of fractures, possibly indicating variation in the structural weakness of a volcanic edifice. Continuous monitoring of heat flux, combined with a realistic model, would contribute to multidisciplinary investigations aimed at evaluating changes in volcano dynamics.
    Description: National Department of Civil Protection
    Description: Published
    Description: 31
    Description: 5V. Processi eruttivi e post-eruttivi
    Description: JCR Journal
    Keywords: Volcanic activity ; Ground temperature ; Heat flux ; Continuous monitoring ; 04.08. Volcanology ; 05.04. Instrumentation and techniques of general interest
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 54
    Publication Date: 2019-03-26
    Description: The examples of geochemical monitoring results provided in this review article show the close relationships among data analysis, interpretation, and modeling. We particularly focus on describing the fieldwork procedures, since any theoretical approach must always be verified and supported by field data, rather than just by experiments controlled in laboratory.
    Description: Fluids discharged from volcanic systems are the direct surface manifestation of magma degassing at depth and provide primary insights for evaluating the state of volcanic activity. We review the geochemical best practice in volcanic surveillance based to a huge amount of monitoring data collected at different active volcanoes using both continuous and discontinuous approaches. The targeted volcanoes belong to the Aeolian Arc located in the Tyrrhenian Sea (Italy), and they have exhibited different activity states during the monitoring activities reported here. La Fossa cone on Vulcano Island has been in an uninterrupted quiescent stage characterized by variable solfataric activity. In contrast, Stromboli Island has shown a persistent mild explosive activity, episodically interrupted by effusive eruptions (in 1985, 2002, 2007, and 2014). Panarea Island, which is the summit of a seamount rising from the seafloor of the southern Tyrrhenian Sea, showed only undersea fluid release. The only observable clues of active volcanism at Panarea Island have been impulsive changes in the undersea fluid release, with the last submarine gas burst event being observed in November 2002. The geochemical monitoring and observations at each of these volcanoes has directly involved the volcanic plume and/or the fumarole vents, thermal waters, and diffuse soil degassing, depending on the type of manifestations and the level of activity encountered. Through direct access to the magmatic samples (when possible) and the collection of as much observable data related to the fluid release as possible, the aim has been (i) to verify the thermodynamic equilibrium condition, (ii) to discern among the possible hydrothermal, magmatic, marine, and meteoric sources in the fluid mixtures, (iii) to develop models of the fluid circulation supported by data, (iv) to follow the evolution of these natural systems by long-term monitoring, and (v) to support surveillance actions related to defining the volcanic risk and the evaluation and possible mitigation of related hazards. The examples provided in this review article show the close relationships among data analysis, interpretation, and modeling. We particularly focus on describing the fieldwork procedures, since any theoretical approach must always be verified and supported by field data, rather than just by experiments controlled in laboratory. Indeed the natural systems involve many variables producing effects that cannot be neglected. The monitored volcanic systems have been regarded as natural laboratories, and all of the activities have focused on both volcanological research and surveillance purposes in order to ensure that these two goals have overlapped. An appendix is also included that explains the scientific approach to the systematic activities, regarding geochemical monitoring of volcanic activity.
    Description: Published
    Description: 241-276
    Description: 4V. Processi pre-eruttivi
    Description: JCR Journal
    Keywords: geochemical methodologies ; Vulcano ; Stromboli ; Panarea ; Geochemical Monitoring
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 55
    Publication Date: 2021-03-29
    Description: Five volcanic tuffs ranging from dacitic tuffs of Hungary to rhyolite, phonolite and basaltic tuffs of Germany were consolidated under laboratory conditions. Prior to consolidation an anti-hygro, a hydrous consolidant, which reduces the swelling ability of clay minerals, was applied. The three consolidants, a silicic acid ester (SAE), an elastic silicic acid ester (eSAE) and an acrylate resin (PMMA) were applied on test specimens under vacuum. Petrographic characterisation (polarizing microscopy, XRD, SEM) provided data for fabric analyses and the mineral composition of the tuffs. Changes in fabric, effective porosity, density, tensile strength, ultrasonic wave velocity were evaluated after the treatment. Weathering simulation tests such as hygric dilatation and thermal dilatation aimed to prove the effectiveness of consolidation and the durability of consolidated tuff samples. More than 500 samples were analysed. The tests showed that SAE caused the highest increase in indirect tensile strength. The water absorption and the pore size distribution of the tuffs were modified by consolidation. The PMMA reduced the water absorption the most, whereas SAE modified it the least. All the tested consolidants increased the thermal dilatation of the tuffs. The changes in hygric dilatation were not uniform: for most tuffs SAE increased and PMMA decreased the hygric dilatation, although the clay-rich Habichtswald tuff showed the opposite trend. The changes in hygric and thermal behaviour of consolidated tuff require special care when specific consolidants are chosen. These products modify the physical properties of consolidated tuffs and change the behaviour of weathering.
    Keywords: Strengthening agents; Tuff; Silicic acid ester; PMMA; Durability ; 551
    Language: English
    Type: article , publishedVersion
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  • 56
    Publication Date: 2021-03-29
    Keywords: Albrecht-von-Haller-Institut für Pflanzenwissenschaften / Abteilung für Palynologie und Klimadynamik ; Palaeolimnology; Holocene climate; Diatoms; Green algae; Pollen; Karst ; 551
    Language: English
    Type: article , publishedVersion
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  • 57
    Publication Date: 2021-03-29
    Description: A 782 d solubilization study using not shaken batch experiments and involving one uranium-bearing rock and three natural carbonate minerals was conducted to characterize uranium (U) leaching under oxic conditions. Results showed that aqueous U concentration increased continuously with a solubilization rate of 0.16 mgm-2h-1 for the first 564 d (1.5 y). After 1.5 y, U concentration reached a maximum value (saturation) and decreased afterwards. The saturation concentration of 54 mgL-1 (mean value) was influenced to various extent by the presence of carbonate minerals. Dissolution/precipitation, adsorption or ion exchange processes appear to control U solubilization.
    Keywords: 551
    Language: English
    Type: anthologyArticle , acceptedVersion
    Format: 425-435
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  • 58
    Publication Date: 2021-04-25
    Keywords: 551 ; VU 000 ; 38.20
    Language: English
    Type: anthologyArticle , publishedVersion
    Format: 179-211
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  • 59
    Publication Date: 2021-04-25
    Keywords: 551 ; VU 000 ; 38.20
    Language: English
    Type: anthologyArticle , publishedVersion
    Format: 102-120
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  • 60
    Publication Date: 2021-04-25
    Keywords: 551 ; VU 000 ; 38.20
    Language: English
    Type: anthologyArticle , publishedVersion
    Format: 121-133
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  • 61
    Publication Date: 2021-03-29
    Description: The veneer cladding of the Oeconomicum (OEC, Göttingen), the State Theatre of Darmstadt (STD, Darmstadt) and of the State and University Library (SUB, Göttingen) is characterised by pronounced bowing after a short time of exposure. Direct comparison of bowing data related to measurements from 2000 to 2003 at the SUB clearly show that the amplitude in bowing had significantly increased. The bowing is different in intensity and orientation (concave, convex). The cladding material (Peccia marble, Rosa Estremoz marble and Carrara marble) are different in lattice preferred orientation, grain size distribution and grain interlocking. Depending on the bowing, panels may show cracks mostly initiated at the dowels. The percentage of visible cracks and breakouts increases with the amplitude of bowing except for the STD. Repetitive heatingcooling under dry conditions leads to considerable inelastic residual strain only after the first or second thermal cycle. The residual strain continuously increases again if water is present, whereby the moisture content after a thermal cycle has a certain impact on the decay rate. The water-enhanced thermal dilatation strongly correlates with the deterioration rate obtained from the laboratory bow test. Detailed petrophysical investigations provide evidence that with increasing bowing a decrease of mechanical properties (flexural strength or breaking load at dowel hole) occur. Marble degradation is also connected with the increase in porosity and a general shift of the maximum pore radii to larger pore sizes...
    Keywords: Bowing; Marble; Building mapping;Residual strain;Thermal expansion; Bowing potential ; 551
    Language: English
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  • 62
    facet.materialart.
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    In:  EPIC3Ocean Dynamics, Springer, pp. 1-17
    Publication Date: 2019-01-23
    Description: Mesoscale eddies in the open ocean are mostly formed by baroclinic instability, in which the available potential energy from the large-scale slope of the isopycnals is converted into the kinetic energy of the flow around the eddy. As a permissible form of motion within a rapidly rotating and stratified fluid eddies driven by baroclinic instability are important for the poleward and vertical transport, not only of physical properties, but also biogeochemical ones. In this paper, we present observations from four cyclonic eddies in the Antarctic Circumpolar Current. We have sorted them by apparent age, based on altimeter data and consideration of the degree of homogenisation of the potential temperature-salinity(θS) relationship, and then looked at the spatial distribution of measures of fine-scale variability in the upper thermocline. The youngest eddy shows isopycnals which are domed upwards and it contains a variety of waters with differing temperature-salinity characteristics. The fine-scale variability is higher in the core of the eddy. The older eddies show a core which is more homogeneous in potential temperature and salinity. The isopycnals are flatter in the centre of the eddy, and in cross-section, they can be M-shaped, so that the steepest gradients are concentrated around the edge. The fine-scale variability is more concentrated around the edges where the density gradients are stronger. We hypothesise that lateral stirring and mixing processes within the eddy homogenise the water so that the temperature-salinity relationship becomes tighter. When the eddy eventually collapses, this modified water can be released back into the flow. Thus, we see how the interplay of mesoscale and small-scale processes are modifying water mass properties and, potentially, regulate biogeochemical processes.
    Repository Name: EPIC Alfred Wegener Institut
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  • 63
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    Springer
    In:  EPIC3YOUMARES 8 - Ocean across boundaries: Learning from each other, Kiel, Germany, 2017-09-13-2017-09-15Cham, Springer
    Publication Date: 2019-09-13
    Repository Name: EPIC Alfred Wegener Institut
    Type: Conference , notRev
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  • 64
    Publication Date: 2022-05-25
    Description: © The Author(s), 2017. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Regional Studies in Marine Science 18 (2018): 1-10, doi:10.1016/j.rsma.2017.12.004.
    Description: The variations of temperature and salinity in the Sudanese coastal zone of the Red Sea are studied for the first time using measurements acquired from survey cruises during 2009–2013 and from a mooring during 2014–2015. The measurements show that temperature and salinity variability above the permanent pycnocline is dominated by seasonal signals, similar in character to seasonal temperature and salinity oscillations observed further north on the eastern side of the Red Sea. Using estimates of heat flux, circulation and horizontal temperature/salinity gradients derived from a number of sources, we determined that the observed seasonal signals of temperature and salinity are not the product of local heat and mass flux alone, but are also due to alongshore advection of waters with spatially varying temperature and salinity. As the temperature and salinity gradients, characterized by warmer and less saline water to the south, exhibit little seasonal variation, the seasonal salinity and temperature variations are closely linked to an observed seasonal oscillation in the along-shore flow, which also has a mean northward component. We find that the inclusion of the advection terms in the heat and mass balance has two principal effects on the computed temperature and salinity series. One is that the steady influx of warmer and less saline water from the south counteracts the long-term trend of declining temperatures and rising salinities computed with only the local surface flux terms, and produces a long-term steady state in temperature and salinity. The second effect is produced by the seasonal alongshore velocity oscillation and most profoundly affects the computed salinity, which shows no seasonal signal without the inclusion of the advective term. In both the observations and computed results, the seasonal salinity signal lags that of temperature by roughly 3 months.
    Description: The SPS surveys were funded by the Norwegian Norad’s Program for Master Studies and organized by IMR–RSU in Port Sudan. The central Red Sea mooring data were acquired as part of a WHOI–KAUST collaboration funded by Award Nos. USA00001, USA00002, and KSA00011 to the WHOI by the KAUST in the Kingdom of Saudi Arabia. The work of I. Skjelvan and A.M. Omar was partly supported by the Research Council of Norway through the MIMT Center for Research-based Innovation. This work is part of a Ph.D. project at GFI–UiB funded by the Norwegian Quota program .
    Keywords: Coastal Red Sea ; Temperature ; Salinity ; Time series ; Seasonality ; Alongshore advection
    Repository Name: Woods Hole Open Access Server
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  • 65
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Nature Communications 9 (2018): 1287, doi:10.1038/s41467-018-03468-6.
    Description: Warm subtropical-origin Atlantic water flows northward across the Greenland-Scotland Ridge into the Nordic Seas, where it relinquishes heat to the atmosphere and gradually transforms into dense Atlantic-origin water. Returning southward along east Greenland, this water mass is situated beneath a layer of cold, fresh surface water and sea ice. Here we show, using measurements from autonomous ocean gliders, that the Atlantic-origin water was re-ventilated while transiting the western Iceland Sea during winter. This re-ventilation is a recent phenomenon made possible by the retreat of the ice edge toward Greenland. The fresh surface layer that characterises this region in summer is diverted onto the Greenland shelf by enhanced onshore Ekman transport induced by stronger northerly winds in fall and winter. Severe heat loss from the ocean offshore of the ice edge subsequently triggers convection, which further transforms the Atlantic-origin water. This re-ventilation is a counterintuitive occurrence in a warming climate, and highlights the difficulties inherent in predicting the behaviour of the complex coupled climate system.
    Description: Support for this work was provided by the Norwegian Research Council under Grant agreement no. 231647 (L.H. and K.V.), the Bergen Research Foundation under Grant BFS2016REK01 (K.V.), and the Centre for Climate Dynamics at the Bjerknes Centre through the FRESHWATER project (K.V.). Additional funding was provided by the Swiss National Science Foundation grants P2EZP2162267 and P300P2174307 (L.P.), the National Science Foundation grant OCE-1558742 (M.A.S.), the Norway Fulbright Foundation (K.V.), the Canada Fulbright Foundation (G.W.K.M.), and the Natural Sciences and Engineering Research Council of Canada (G.W.K.M.).
    Repository Name: Woods Hole Open Access Server
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  • 66
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Scientific Reports 8 (2018): 4917, doi:10.1038/s41598-018-23167-y.
    Description: Intertidal inhabitants are exposed to the 24-hour solar day, and the 12.4 hour rising and falling of the tides. One or both of these cycles govern intertidal organisms’ behaviour and physiology, yet little is known about the molecular clockworks of tidal rhythmicity. Here, we show that the limpet Cellana rota exhibits robust tidally rhythmic behaviour and gene expression. We assembled a de-novo transcriptome, identifying novel tidal, along with known circadian clock genes. Surprisingly, most of the putative circadian clock genes, lack a typical rhythmicity. We identified numerous tidally rhythmic genes and pathways commonly associated with the circadian clock. We show that not only is the behaviour of an intertidal organism in tune with the tides, but so too are many of its genes and pathways. These findings highlight the plasticity of biological timekeeping in nature, strengthening the growing notion that the role of ‘canonical’ circadian clock genes may be more fluid than previously thought, as exhibited in an organism which has evolved in an environment where tidal oscillations are the dominant driving force.
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  • 67
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Scientific Reports 8 (2018): 8128, doi:10.1038/s41598-018-26484-4.
    Description: The kakapo is a critically endangered, herbivorous parrot endemic to New Zealand. The kakapo hindgut hosts a dense microbial community of low taxonomic diversity, typically dominated by Escherichia fergusonii, and has proven to be a remarkably stable ecosystem, displaying little variation in core membership over years of study. To elucidate mechanisms underlying this robustness, we performed 16S rRNA gene-based co-occurrence network analysis to identify potential interactions between E. fergusonii and the wider bacterial community. Genomic and metagenomic sequencing were employed to facilitate interpretation of potential interactions observed in the network. E. fergusonii maintained very few correlations with other members of the microbiota, and isolates possessed genes for the generation of energy from a wide range of carbohydrate sources, including plant fibres such as cellulose. We surmise that this dominant microorganism is abundant not due to ecological interaction with other members of the microbiota, but its ability to metabolise a wide range of nutrients in the gut. This research represents the first concerted effort to understand the functional roles of the kakapo microbiota, and leverages metagenomic data to contextualise co-occurrence patterns. By combining these two techniques we provide a means for studying the diversity-stability hypothesis in the context of bacterial ecosystems.
    Description: This work was supported by funding from the Department of Conservation (DOC) as well as a University of Auckland Faculty Research Development Fund grant (9841 3626187) to MWT, and a University of Auckland Doctoral Scholarship to DWW.
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  • 68
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Scientific Reports 8 (2018): 7363, doi:10.1038/s41598-018-25565-8.
    Description: Satellite-tracking of mature white sharks (Carcharodon carcharias) has revealed open-ocean movements spanning months and covering tens of thousands of kilometers. But how are the energetic demands of these active apex predators met as they leave coastal areas with relatively high prey abundance to swim across the open ocean through waters often characterized as biological deserts? Here we investigate mesoscale oceanographic variability encountered by two white sharks as they moved through the Gulf Stream region and Sargasso Sea in the North Atlantic Ocean. In the vicinity of the Gulf Stream, the two mature female white sharks exhibited extensive use of the interiors of clockwise-rotating anticyclonic eddies, characterized by positive (warm) temperature anomalies. One tagged white shark was also equipped with an archival tag that indicated this individual made frequent dives to nearly 1,000 m in anticyclones, where it was presumably foraging on mesopelagic prey. We propose that warm temperature anomalies in anticyclones make prey more accessible and energetically profitable to adult white sharks in the Gulf Stream region by reducing the physiological costs of thermoregulation in cold water. The results presented here provide valuable new insight into open ocean habitat use by mature, female white sharks that may be applicable to other large pelagic predators.
    Description: This work was supported by the WHOI Ocean Life Institute and awards from NASA and NSF.
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  • 69
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Nature Communications 9 (2018): 2398, doi:10.1038/s41467-018-04809-1.
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  • 70
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Scientific Reports 8 (2018): 10610, doi:10.1038/s41598-018-28871-3.
    Description: Foraminifera in sediments exposed to gas-hydrate dissociation are not expected to have cellular adaptations that facilitate inhabitation of chemosynthesis-based ecosystems because, to date, there are no known endemic seep foraminifera. To establish if foraminifera inhabit sediments impacted by gas-hydrate dissociation, we examined the cellular ultrastructure of Melonis barleeanus (Williamson, 1858) from the Vestnesa gas hydrate province (Arctic Ocean, west of Svalbard at ~79 °N; ~1200-m depth; n = 4). From sediments with gas hydrate indicators, living M. barleeanus had unusual pore plugs composed of a thick, fibrous meshwork; mitochondria were concentrated at the cell periphery, under pore plugs. While there was no evidence of endosymbioses with prokaryotes, most M. barleeanus specimens were associated with what appear to be Type I methanotrophic bacteria. One foraminifer had a particularly large bolus of these microbes concentrated near its aperture. This is the first documented instance of bona fide living M. barleeanus in gas-hydrate sediments and first documentation of a foraminifer living in close association with putative methanotrophs. Our observations have implications to paleoclimate records utilizing this foundational foraminiferal species.
    Description: JMB was funded by a WHOI Independent Study Award (Mellon Grant), with partial support from NSF grant OCE-1634469. GP and CAGE 15-2 cruise were supported by the Research Council of Norway through CAGE Center for Excellence in Arctic Gas Hydrate Environment and Climate project 223259 and NORCRUST (project number 255150).
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  • 71
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Quaternary Science Reviews 185 (2018): 135-152, doi:10.1016/j.quascirev.2018.02.012.
    Description: The largest coherent cold-water coral (CWC) mound province in the Atlantic Ocean exists along the Mauritanian margin, where up to 100 m high mounds extend over a distance of ∼400 km, arranged in two slope-parallel chains in 400–550 m water depth. Additionally, CWCs are present in the numerous submarine canyons with isolated coral mounds being developed on some canyon flanks. Seventy-seven Uranium-series coral ages were assessed to elucidate the timing of CWC colonisation and coral mound development along the Mauritanian margin for the last ∼120,000 years. Our results show that CWCs were present on the mounds during the Last Interglacial, though in low numbers corresponding to coral mound aggradation rates of 16 cm kyr−1. Most prolific periods for CWC growth are identified for the last glacial and deglaciation, resulting in enhanced mound aggradation (〉1000 cm kyr−1), before mound formation stagnated along the entire margin with the onset of the Holocene. Until today, the Mauritanian mounds are in a dormant state with only scarce CWC growth. In the canyons, live CWCs are abundant since the Late Holocene at least. Thus, the canyons may serve as a refuge to CWCs potentially enabling the observed modest re-colonisation pulse on the mounds along the open slope. The timing and rate of the pre-Holocene coral mound aggradation, and the cessation of mound formation varied between the individual mounds, which was likely the consequence of vertical/lateral changes in water mass structure that placed the mounds near or out of oxygen-depleted waters, respectively.
    Description: This study received funding from and contributes to the DFG-projects "Palaeo-WACOM" (HE 3412/17-1) and "Cold-water coral mound development in a tropical upwelling cell – the great wall of(f) Mauritania" (Ti 706/3-1). A. Freiwald received funding from the Hessian initiative for the development of scientific and economic excellence (LOEWE) at the Biodiversity and Climate Research Centre (BiK-F), Frankfurt, Germany.
    Keywords: Lophelia pertusa ; Coral mound ; Submarine canyon ; Uranium-series dating ; Mound aggradation rate ; Last glacial ; Dissolved oxygen concentration ; South Atlantic Central Water ; Mauritanian margin
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  • 72
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Population Ecology 60 (2018): 21-36, doi:10.1007/s10144-018-0615-8.
    Description: Models of sexually-reproducing populations that consider only a single sex cannot capture the effects of sex-specific demographic differences and mate availability. We present a new framework for two-sex demographic models that implements and extends the birth-matrix mating-rule approach of Pollak. The model is a continuous-time matrix model that explicitly includes the processes of mating (which is nonlinear but homogeneous), offspring production, and demographic transitions and survival. The resulting nonlinear model converges to exponential growth with an equilibrium population composition. The model can incorporate age- or stage-structured life histories and flexible mating functions. As an example, we apply the model to analyze the effects of mating strategies (polygamy or monogamy, and mated unions composed of males and females, of variable duration) on the response to sex-biased harvesting. The combination of demographic complexity with the interaction of the sexes can have major population dynamic effects and can change the outcome of evolution on sex-related characters.
    Description: This work was supported by a National Science Foundation Graduate Research Fellowship to ES, under Grant 1122374. HC acknowledges support from NSF Grants DEB1145017 and DEB1257545 and support from the European Research Council under the European Union’s Seventh Framework Programme (FP7/2007-2013), ERC Advanced Grant 322989. ES acknowledges support from the Academic Programs office of the Woods Hole Oceanographic Institution.
    Keywords: Birth matrix-mating rule ; BMMR ; Demography ; Matrix population models ; Sex-biased harvest ; Two-sex models
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  • 73
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Nature Communications 9 (2018): 2809, doi:10.1038/s41467-018-05253-x.
    Description: Voltage-sensing (VSD) and cyclic nucleotide-binding domains (CNBD) gate ion channels for rapid electrical signaling. By contrast, solute carriers (SLCs) that passively redistribute substrates are gated by their substrates themselves. Here, we study the orphan sperm-specific solute carriers SLC9C1 that feature a unique tripartite structure: an exchanger domain, a VSD, and a CNBD. Voltage-clamp fluorimetry shows that SLC9C1 is a genuine Na+/H+ exchanger gated by voltage. The cellular messenger cAMP shifts the voltage range of activation. Mutations in the transport domain, the VSD, or the CNBD strongly affect Na+/H+ exchange, voltage gating, or cAMP sensitivity, respectively. Our results establish SLC9C1 as a phylogenetic chimaera that combines the ion-exchange mechanism of solute carriers with the gating mechanism of ion channels. Classic SLCs slowly readjust changes in the intra- and extracellular milieu, whereas voltage gating endows the Na+/H+ exchanger with the ability to produce a rapid pH response that enables downstream signaling events.
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  • 74
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Progress in Earth and Planetary Science 5 (2018): 19, doi:10.1186/s40645-018-0167-8.
    Description: The Quaternary hemipelagic sediments of the Japan Sea are characterized by centimeter- to decimeter-scale alternation of dark and light clay to silty clay, which are bio-siliceous and/or bio-calcareous to a various degree. Each of the dark and light layers are considered as deposited synchronously throughout the deeper (〉 500 m) part of the sea. However, attempts for correlation and age estimation of individual layers are limited to the upper few tens of meters. In addition, the exact timing of the depositional onset of these dark and light layers and its synchronicity throughout the deeper part of the sea have not been explored previously, although the onset timing was roughly estimated as ~ 1.5 Ma based on the result of Ocean Drilling Program legs 127/128. Consequently, it is not certain exactly when their deposition started, whether deposition of dark and light layers was synchronous and whether they are correlatable also in the earlier part of their depositional history. The Quaternary hemipelagic sediments of the Japan Sea were drilled at seven sites during Integrated Ocean Drilling Program Expedition 346 in 2013. Alternation of dark and light layers was recovered at six sites whose water depths are 〉 ~ 900 m, and continuous composite columns were constructed at each site. Here, we report our effort to correlate individual dark layers and estimate their ages based on a newly constructed age model at Site U1424 using the best available paleomagnetic datum and marker tephras. The age model is further tuned to LR04 δ18O curve using gamma ray attenuation density (GRA) since it reflects diatom contents that are higher during interglacial high-stands. The constructed age model for Site U1424 is projected to other sites using correlation of dark layers to form a high-resolution and high-precision paleo-observatory network that allows to reconstruct changes in material fluxes with high spatio-temporal resolutions.
    Description: This work was supported by a grant from IODP Exp. 346 After Cruise Research Program, JAMSTEC, awarded to TR, IK, Irino T, Itaki T, ST, KY, SS, and KA and from JSPS KAKENHI grant number 16H01765 awarded to TR.
    Keywords: Quaternary sediments ; Japan Sea ; Inter-site correlation ; High-resolution age model ; IODP ; Expedition 346 ; U1424 ; U1425 ; U1426 ; U1430
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  • 75
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Remote Sensing of Environment 217 (2018): 126-143, doi:10.1016/j.rse.2018.08.010.
    Description: Diatoms dominate global silica production and export production in the ocean; they form the base of productive food webs and fisheries. Thus, a remote sensing algorithm to identify diatoms has great potential to describe ecological and biogeochemical trends and fluctuations in the surface ocean. Despite the importance of detecting diatoms from remote sensing and the demand for reliable methods of diatom identification, there has not been a systematic evaluation of algorithms that are being applied to this end. The efficacy of these models remains difficult to constrain in part due to limited datasets for validation. In this study, we test a bio-optical algorithm developed by Sathyendranath et al. (2004) to identify diatom dominance from the relationship between ratios of remote sensing reflectance and chlorophyll concentration. We evaluate and refine the original model with data collected at the Martha's Vineyard Coastal Observatory (MVCO), a near-shore location on the New England shelf. We then validated the refined model with data collected in Harpswell Sound, Maine, a site with greater optical complexity than MVCO. At both sites, despite relatively large changes in diatom fraction (0.8–82% of chlorophyll concentration), the magnitude of variability in optical properties due to the dominance or non-dominance of diatoms is less than the variability induced by other absorbing and scattering constituents of the water. While the original model performance was improved through successive re-parameterizations and re-formulations of the absorption and backscattering coefficients, we show that even a model originally parameterized for the Northwest Atlantic and re-parameterized for sites such as MVCO and Harpswell Sound performs poorly in discriminating diatom-dominance from optical properties.
    Description: This work was supported by: a Woods Hole Oceanographic Institution Summer Student Fellowship (NSF REU award #1156952) and a Bowdoin College Grua/O'Connell Research Award to SJK; grants to HMS from NASA (Ocean Biology and Biogeochemistry program and Biodiversity and Ecological Forecasting program), NSF (Ocean Sciences), the Gordon and Betty Moore Foundation, the Simons Foundation, and NOAA through the Cooperative Institute for the North Atlantic Region (CINAR) under Cooperative Agreement NA14OAR4320158; and grants to CSR from NASA (Ocean Biology and Biogeochemistry program).
    Keywords: Phytoplankton ; Community structure ; Ocean color ; Diatoms
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  • 76
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Regional Studies in Marine Science 24 (2018): 336-342, doi:10.1016/j.rsma.2018.09.006.
    Description: The variations of sea level over the Red Sea may be divided into three broad categories: tidal, seasonal and weather-band. Our study employs a variety of in situ and satellite-derived data in the first comprehensive examination of the Red Sea water level variations in the weather-band (covering periods of 4–30 days). In the central Red Sea, the range of the weather-band sea level signal is of order 0.7 m, which exceeds the tidal and seasonal sea level ranges. From EOF and correlation analysis, we find that a large fraction of the weather-band sea level variation is due to a single mode of motion that extends over the entire Red Sea. In this mode, the water level rises and falls in unison with an amplitude that declines going southward over the southern Red Sea. The temporal signal of this mode is highly correlated with the along-axis surface wind stress over the southern Red Sea, and is closely reproduced by a simple one-dimensional barotropic model with forcing by the along-axis wind stress. Although this model does not account for the full suite of dynamics affecting weather-band sea level variations in the Red Sea, it may serve as a useful predictive tool. Sea level changes associated with the development and movement of sub-mesoscale features (e.g., eddies and boundary currents) are also shown to contribute to weather-band sea level motions in the Red Sea.
    Description: The pressure sensor and meteorological buoy data were acquired as part of a program supported by Award Nos. USA00001, USA00002 and KSA00011 made by KAUST to WHOI. The data analysis and modeling work of this study were supported General Commission for Survey (GCS), under a project number RGC/3/1612-01-01 made by Office of Sponsored research (ORS)/KAUST, Kingdom of Saudi Arabia.
    Keywords: Red Sea water levels ; Wind-driven sea level variations
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  • 77
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Scientific Reports 8 (2018): 14955, doi:10.1038/s41598-018-33021-w.
    Description: Glomeruli are the functional units of olfactory information processing but little remains known about their individual unit function. This is due to their widespread activation by odor stimuli. We expressed channelrhodopsin-2 in a single olfactory sensory neuron type, and used laser stimulation and simultaneous in vivo calcium imaging to study the responses of a single glomerulus to optogenetic stimulation. Calcium signals in the neuropil of this glomerulus were representative of the sensory input and nearly identical if evoked by intensity-matched odor and laser stimuli. However, significantly fewer glomerular layer interneurons and olfactory bulb output neurons (mitral cells) responded to optogenetic versus odor stimuli, resulting in a small and spatially compact optogenetic glomerular unit response. Temporal features of laser stimuli were represented with high fidelity in the neuropil of the glomerulus and the mitral cells, but not in interneurons. Increases in laser stimulus intensity were encoded by larger signal amplitudes in all compartments of the glomerulus, and by the recruitment of additional interneurons and mitral cells. No spatial expansion of the glomerular unit response was observed in response to stronger input stimuli. Our data are among the first descriptions of input-output transformations in a selectively activated olfactory glomerulus.
    Description: Funded by the World Class Institute/National Research Foundation of Korea (KRF: WCI 2009-003) and NIH: DC005259 and NS099691 grants.
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  • 78
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS One 13 (2018): e0205015, doi:10.1371/journal.pone.0205015.
    Description: Channelopsins and photo-regulated ion channels make it possible to use light to control electrical activity of cells. This powerful approach has lead to a veritable explosion of applications, though it is limited to changing membrane voltage of the target cells. An enormous potential could be tapped if similar opto-genetic techniques could be extended to the control of chemical signaling pathways. Photopigments from invertebrate photoreceptors are an obvious choice—as they do not bleach upon illumination -however, their functional expression has been problematic. We exploited an unusual opsin, pScop2, recently identified in ciliary photoreceptors of scallop. Phylogenetically, it is closer to vertebrate opsins, and offers the advantage of being a bi-stable photopigment. We inserted its coding sequence and a fluorescent protein reporter into plasmid vectors and demonstrated heterologous expression in various mammalian cell lines. HEK 293 cells were selected as a heterologous system for functional analysis, because wild type cells displayed the largest currents in response to the G-protein activator, GTP-γ-S. A line of HEK cells stably transfected with pScop2 was generated; after reconstitution of the photopigment with retinal, light responses were obtained in some cells, albeit of modest amplitude. In native photoreceptors pScop2 couples to Go; HEK cells express poorly this G-protein, but have a prominent Gq/PLC pathway linked to internal Ca mobilization. To enhance pScop2 competence to tap into this pathway, we swapped its third intracellular loop—important to confer specificity of interaction between 7TMDRs and G-proteins—with that of a Gq-linked opsin which we cloned from microvillar photoreceptors present in the same retina. The chimeric construct was evaluated by a Ca fluorescence assay, and was shown to mediate a robust mobilization of internal calcium in response to illumination. The results project pScop2 as a potentially powerful optogenetic tool to control signaling pathways.
    Description: This work was funded by Colciencias grant FP44842-010-2015 and Connecticut Fund for Science.
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  • 79
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Scientific Reports 8 (2018): 15517, doi:10.1038/s41598-018-33610-9.
    Description: Subduction zones impose an important control on the geochemical cycling between the surficial and internal reservoirs of the Earth. Sulphur and carbon are transferred into Earth’s mantle by subduction of pelagic sediments and altered oceanic lithosphere. Release of oxidizing sulphate- and carbonate-bearing fluids modifies the redox state of the mantle and the chemical budget of subduction zones. Yet, the mechanisms of sulphur and carbon cycling within subduction zones are still unclear, in part because data are typically derived from arc volcanoes where fluid compositions are modified during transport through the mantle wedge. We determined the bulk rock elemental, and sulphur and carbon isotope compositions of exhumed ultramafic and metabasic rocks from Syros, Greece. Comparison of isotopic data with major and trace element compositions indicates seawater alteration and chemical exchange with sediment-derived fluids within the subduction zone channel. We show that small bodies of detached slab material are subject to metasomatic processes during exhumation, in contrast to large sequences of obducted ophiolitic sections that retain their seafloor alteration signatures. In particular, fluids circulating along the plate interface can cause sulphur mobilization during several stages of exhumation within high-pressure rocks. This takes place more pervasively in serpentinites compared to mafic rocks.
    Description: This project was supported by NSF-EAR grant 1324566 to E.M.S. and B.C.G., and NSF EAR award 1250470 to M.J.C. We acknowledge support by the German Research Foundation and the Open Access Publication Fund of the Freie Universität Berlin.
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  • 80
    Publication Date: 2022-05-25
    Description: This paper is not subject to U.S. copyright. The definitive version was published in Global and Planetary Change 167 (2018): 1-23, doi:10.1016/j.gloplacha.2018.04.004.
    Description: A compilation of foraminiferal stable isotope measurements from southern high latitude (SHL) deep-sea sites provides a novel perspective important for understanding Earth's paleotemperature and paleoceanographic changes across the rise and fall of the Cretaceous Hot Greenhouse climate and the subsequent Paleogene climatic optimum. Both new and previously published results are placed within an improved chronostratigraphic framework for southern South Atlantic and southern Indian Ocean sites. Sites studied were located between 58° and 65°S paleolatitude and were deposited at middle to upper bathyal paleodepths. Oxygen isotope records suggest similar trends in both bottom and surface water temperatures in the southern sectors of the South Atlantic and in the Indian Ocean basins. Warm conditions were present throughout the Albian, extreme warmth existed during the Cretaceous Thermal Maximum (early-mid-Turonian) through late Santonian, and long-term cooling began in the Campanian and culminated in Cretaceous temperature minima during the Maastrichtian. Gradients between surface and seafloor δ18O and δ13C values were unusually high throughout the 11.5 m.y. of extreme warmth during the Turonian-early Campanian, but these vertical gradients nearly disappeared by the early Maastrichtian. In absolute terms, paleotemperature estimates that use standard assumptions for pre-glacial seawater suggest sub-Antarctic bottom waters were ≥21 °C and sub-Antarctic surface waters were ≥27 °C during the Turonian, values warmer than published climate models support. Alternatively, estimated temperatures can be reduced to the upper limits of model results through freshening of high latitude waters but only if there were enhanced precipitation of water with quite low δ18O values. Regardless, Turonian planktonic δ18O values are ~1.5‰ lower than minimum values reported for the Paleocene-Eocene Thermal Maximum (PETM) from the same region, a difference which corresponds to Turonian surface temperatures ~6 °C warmer than peak PETM temperatures if Turonian and Paleocene temperatures are estimated using the same assumptions. It is likely that warm oceans surrounding and penetrating interior Antarctica (given higher relative sea level) prevented growth of Antarctic ice sheets at all but the highest elevations from the late Aptian through late Campanian; however, Maastrichtian temperatures may have been cool enough to allow growth of small, ephemeral ice sheets. The standard explanation for the sustained warmth during Cretaceous Hot Greenhouse climate invokes higher atmospheric CO2 levels from volcanic outgassing, but correlation among temperature estimates, proxy estimates of pCO2, and intervals of high fluxes of both mafic and silicic volcanism are mostly poor. This comparison demonstrates that the relative timing between events and their putative consequences need to be better constrained to test and more fully understand relationships among volcanism, pCO2, temperature ocean circulation, Earth's biota and the carbon cycle.
    Description: Funding from the Smithsonian National Museum of Natural History and the National Science Foundation (NSF-OCE 1261586) helped support this research.
    Keywords: Cretaceous Hot Greenhouse ; Foraminiferal stable isotopes ; Volcanic outgassing ; pCO2 proxies ; Greenhouse glacier hypothesis ; Southern high latitudes
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  • 81
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Nature Communications 9 (2018): 3077, doi:10.1038/s41467-018-05574-x.
    Description: Paleoclimate reconstructions are only as good as their chronology. In particular, different chronological assumptions for marine sediment cores can lead to different reconstructions of ocean ventilation age and atmosphere−ocean carbon exchange history. Here we build the first high-resolution chronology that is free of the dating uncertainties common in marine sediment records, based on radiocarbon dating twigs found with computed tomography scans in two cores from the Eastern Equatorial Pacific (EEP). With this accurate chronology, we show that the ventilation ages of the EEP thermocline and intermediate waters were similar to today during the Last Glacial Maximum and deglaciation, in contradiction with previous studies. Our results suggest that the glacial respired carbon pool in the EEP was not significantly older than today, and that the deglacial strengthening of the equatorial Pacific carbon source was probably driven by low-latitude processes rather than an increased subsurface supply of upwelled carbon from high-latitude oceans.
    Description: The lab work at NOSAMS was supported by Ocean Ventures Fund from WHOI and an NOSAMS graduate internship granted to N.Z
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  • 82
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLos One 13 (2018): e0200386, doi:10.1371/journal.pone.0200386.
    Description: Soft robotics is an emerging technology that has shown considerable promise in deep-sea marine biological applications. It is particularly useful in facilitating delicate interactions with fragile marine organisms. This study describes the shipboard design, 3D printing and integration of custom soft robotic manipulators for investigating and interacting with deep-sea organisms. Soft robotics manipulators were tested down to 2224m via a Remotely-Operated Vehicle (ROV) in the Phoenix Islands Protected Area (PIPA) and facilitated the study of a diverse suite of soft-bodied and fragile marine life. Instantaneous feedback from the ROV pilots and biologists allowed for rapid re-design, such as adding “fingernails”, and re-fabrication of soft manipulators at sea. These were then used to successfully grasp fragile deep-sea animals, such as goniasterids and holothurians, which have historically been difficult to collect undamaged via rigid mechanical arms and suction samplers. As scientific expeditions to remote parts of the world are costly and lengthy to plan, on-the-fly soft robot actuator printing offers a real-time solution to better understand and interact with delicate deep-sea environments, soft-bodied, brittle, and otherwise fragile organisms. This also offers a less invasive means of interacting with slow-growing deep marine organisms, some of which can be up to 18,000 years old.
    Description: This work is supported by NOAA OER Grant # NA17OAR0110083 “Exploration of the Seamounts of the Phoenix Islands Protected Area” to RDR, EEC, TMS and DFG and Schmidt Ocean Institute Grant: “What is the Current State of the Deep-Sea Coral Ecosystem in the Phoenix Island Protected Area?” to EEC, RDR, TMS and DFG; NSF Instrument Development for Biological Research Award # 1556164 to RJW and #1556123 to DFG; the National Academies Keck Futures Initiative of the National Academy of Sciences under award #NAKFI DBS21 to RJW and DFG; and NFS Research Fellowship awarded to KPB (#DGE1144152). It is also supported by the Wyss Institute for Biologically Inspired Engineering at Harvard University. We are grateful for the support from the National Geographic Society Innovation Challenge (Grant No.: SP 12-14) to RJW and DFG.
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  • 83
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Chemical Geology 493 (2018): 210-223, doi:10.1016/j.chemgeo.2018.05.040.
    Description: The GEOTRACES Intermediate Data Product 2017 (IDP2017) is the second publicly available data product of the international GEOTRACES programme, and contains data measured and quality controlled before the end of 2016. The IDP2017 includes data from the Atlantic, Pacific, Arctic, Southern and Indian oceans, with about twice the data volume of the previous IDP2014. For the first time, the IDP2017 contains data for a large suite of biogeochemical parameters as well as aerosol and rain data characterising atmospheric trace element and isotope (TEI) sources. The TEI data in the IDP2017 are quality controlled by careful assessment of intercalibration results and multi-laboratory data comparisons at crossover stations. The IDP2017 consists of two parts: (1) a compilation of digital data for more than 450 TEIs as well as standard hydrographic parameters, and (2) the eGEOTRACES Electronic Atlas providing an on-line atlas that includes more than 590 section plots and 130 animated 3D scenes. The digital data are provided in several formats, including ASCII, Excel spreadsheet, netCDF, and Ocean Data View collection. Users can download the full data packages or make their own custom selections with a new on-line data extraction service. In addition to the actual data values, the IDP2017 also contains data quality flags and 1-σ data error values where available. Quality flags and error values are useful for data filtering and for statistical analysis. Metadata about data originators, analytical methods and original publications related to the data are linked in an easily accessible way. The eGEOTRACES Electronic Atlas is the visual representation of the IDP2017 as section plots and rotating 3D scenes. The basin-wide 3D scenes combine data from many cruises and provide quick overviews of large-scale tracer distributions. These 3D scenes provide geographical and bathymetric context that is crucial for the interpretation and assessment of tracer plumes near ocean margins or along ridges. The IDP2017 is the result of a truly international effort involving 326 researchers from 25 countries. This publication provides the critical reference for unpublished data, as well as for studies that make use of a large cross-section of data from the IDP2017. This article is part of a special issue entitled: Conway GEOTRACES - edited by Tim M. Conway, Tristan Horner, Yves Plancherel, and Aridane G. González.
    Description: We gratefully acknowledge financial support by the Scientific Committee on Oceanic Research (SCOR) through grants from the U.S. National Science Foundation, including grants OCE-0608600, OCE-0938349, OCE-1243377, and OCE-1546580. Financial support was also provided by the UK Natural Environment Research Council (NERC), the Ministry of Earth Science of India, the Centre National de Recherche Scientifique, l'Université Paul Sabatier de Toulouse, the Observatoire Midi-Pyrénées Toulouse, the Universitat Autònoma de Barcelona, the Kiel Excellence Cluster The Future Ocean, the Swedish Museum of Natural History, The University of Tokyo, The University of British Columbia, The Royal Netherlands Institute for Sea Research, the GEOMAR-Helmholtz Centre for Ocean Research Kiel, and the Alfred Wegener Institute.
    Keywords: GEOTRACES ; Trace elements ; Isotopes ; Electronic atlas ; IDP2017
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  • 84
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Scientific Reports 8 (2018): 15219, doi:10.1038/s41598-018-33283-4.
    Description: This Article corrects an error in Equation 1
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  • 85
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Scientific Reports 8 (2018): 15740, doi:10.1038/s41598-018-33640-3.
    Description: Hurricanes passing over the ocean can mix the water column down to great depths and resuspend massive volumes of sediments on the continental shelves. Consequently, organic carbon and reduced inorganic compounds associated with these sediments can be resuspended from anaerobic portions of the seabed and re-exposed to dissolved oxygen (DO) in the water column. This process can drive DO consumption as sediments become oxidized. Previous studies have investigated the effect of hurricanes on DO in different coastal regions of the world, highlighting the alleviation of hypoxic conditions by extreme winds, which drive vertical mixing and re-aeration of the water column. However, the effect of hurricane-induced resuspended sediments on DO has been neglected. Here, using a diverse suite of datasets for the northern Gulf of Mexico, we find that in the few days after a hurricane passage, decomposition of resuspended shelf sediments consumes up to a fifth of the DO added to the bottom of the water column during vertical mixing. Despite uncertainty in this value, we highlight the potential significance of this mechanism for DO dynamics. Overall, sediment resuspension likely occurs over all continental shelves affected by tropical cyclones, potentially impacting global cycles of marine DO and carbon.
    Description: Support for J. Moriarty was provided by the USGS Mendenhall Program.
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  • 86
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Nature Communications 9 (2018): 2864, doi:10.1038/s41467-018-05313-2.
    Description: The mechanisms of transfer of crustal material from the subducting slab to the overlying mantle wedge are still debated. Mélange rocks, formed by mixing of sediments, oceanic crust, and ultramafics along the slab-mantle interface, are predicted to ascend as diapirs from the slab-top and transfer their compositional signatures to the source region of arc magmas. However, the compositions of melts that result from the interaction of mélanges with a peridotite wedge remain unknown. Here we present experimental evidence that melting of peridotite hybridized by mélanges produces melts that carry the major and trace element abundances observed in natural arc magmas. We propose that differences in nature and relative contributions of mélanges hybridizing the mantle produce a range of primary arc magmas, from tholeiitic to calc-alkaline. Thus, assimilation of mélanges into the wedge may play a key role in transferring subduction signatures from the slab to the source of arc magmas.
    Description: This project was supported by the WHOI Ocean Exploration Institute (OEI) 27071178 to V.L.R.; Previous related projects were supported by NSF EAR-1348063 and WHOI OEI to H.R.M.
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  • 87
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS One 13 (2018): e0207532, doi:10.1371/journal.pone.0207532.
    Description: Acoustic standing waves can precisely focus flowing particles or cells into tightly positioned streams for interrogation or downstream separations. The efficiency of an acoustic standing wave device is dependent upon operating at a resonance frequency. Small changes in a system’s temperature and sample salinity can shift the device’s resonance condition, leading to poor focusing. Practical implementation of an acoustic standing wave system requires an automated resonance control system to adjust the standing wave frequency in response to environmental changes. Here we have developed a rigorous approach for quantifying the optimal acoustic focusing frequency at any given environmental condition. We have demonstrated our approach across a wide range of temperature and salinity conditions to provide a robust characterization of how the optimal acoustic focusing resonance frequency shifts across these conditions. To generalize these results, two microfluidic bulk acoustic standing wave systems (a steel capillary and an etched silicon wafer) were examined. Models of these temperature and salinity effects suggest that it is the speed of sound within the liquid sample that dominates the resonance frequency shift. Using these results, a simple reference table can be generated to predict the optimal resonance condition as a function of temperature and salinity. Additionally, we show that there is a local impedance minimum associated with the optimal system resonance. The integration of the environmental results for coarse frequency tuning followed by a local impedance characterization for fine frequency adjustments, yields a highly accurate method of resonance control. Such an approach works across a wide range of environmental conditions, is easy to automate, and could have a significant impact across a wide range of microfluidic acoustic standing wave systems.
    Description: This research was supported by grants from the National Institute of General Medical Sciences of the National Institutes of Health under award number R21GM107805 and the NSF under award number (OCE-1130140 and OCE-1131134) to SWG, RJO, and HMS.
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  • 88
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Cell Death and Disease 9 (2018): 663, doi:10.1038/s41419-018-0704-9.
    Description: The poor regenerative capacity of descending neurons is one of the main causes of the lack of recovery after spinal cord injury (SCI). Thus, it is of crucial importance to find ways to promote axonal regeneration. In addition, the prevention of retrograde degeneration leading to the atrophy/death of descending neurons is an obvious prerequisite to activate axonal regeneration. Lampreys show an amazing regenerative capacity after SCI. Recent histological work in lampreys suggested that GABA, which is massively released after a SCI, could promote the survival of descending neurons. Here, we aimed to study if GABA, acting through GABAB receptors, promotes the survival and axonal regeneration of descending neurons of larval sea lampreys after a complete SCI. First, we used in situ hybridization to confirm that identifiable descending neurons of late-stage larvae express the gabab1 subunit of the GABAB receptor. We also observed an acute increase in the expression of this subunit in descending neurons after SCI, which further supported the possible role of GABA and GABAB receptors in promoting the survival and regeneration of these neurons. So, we performed gain and loss of function experiments to confirm this hypothesis. Treatments with GABA and baclofen (GABAB agonist) significantly reduced caspase activation in descending neurons 2 weeks after a complete SCI. Long-term treatments with GABOB (a GABA analogue) and baclofen significantly promoted axonal regeneration of descending neurons after SCI. These data indicate that GABAergic signalling through GABAB receptors promotes the survival and regeneration of descending neurons after SCI. Finally, we used morpholinos against the gabab1 subunit to knockdown the expression of the GABAB receptor in descending neurons. Long-term morpholino treatments caused a significant inhibition of axonal regeneration. This shows that endogenous GABA promotes axonal regeneration after a complete SCI in lampreys by activating GABAB receptors.
    Description: Spanish Ministry of Economy and Competitiveness and the European Regional Development Fund 2007–2013 (Grant number: BFU2014-56300-P) and Xunta de Galicia (Grant number: GPC2014/030). D.R.-S. was supported by a fellowship from EMBO (Ref.: 7010) to carry out a short-term stay at the laboratory of JRM. A.B.-I. was supported by a grant from the Xunta de Galicia (Grant number: 2016-PG008) and a grant from the crowdfunding platform Precipita (FECYT; Spanish Ministry of Economy and Competitiveness; grant number 2017-CP081).
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  • 89
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Nature Communications 9 (2018): 2431, doi:10.1038/s41467-018-04421-3.
    Description: Tectonic landforms reveal that the West Antarctic Ice Sheet (WAIS) lies atop a major volcanic rift system. However, identifying subglacial volcanism is challenging. Here we show geochemical evidence of a volcanic heat source upstream of the fast-melting Pine Island Ice Shelf, documented by seawater helium isotope ratios at the front of the Ice Shelf cavity. The localization of mantle helium to glacial meltwater reveals that volcanic heat induces melt beneath the grounded glacier and feeds the subglacial hydrological network crossing the grounding line. The observed transport of mantle helium out of the Ice Shelf cavity indicates that volcanic heat is supplied to the grounded glacier at a rate of ~ 2500 ± 1700 MW, which is ca. half as large as the active Grimsvötn volcano on Iceland. Our finding of a substantial volcanic heat source beneath a major WAIS glacier highlights the need to understand subglacial volcanism, its hydrologic interaction with the marine margins, and its potential role in the future stability of the WAIS.
    Description: This research was supported by the NSF Antarctic program through Award #1341630.
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  • 90
    Publication Date: 2022-05-25
    Description: This paper is not subject to U.S. copyright. The definitive version was published in Deep Sea Research Part II: Topical Studies in Oceanography 152 (2018): 67-81, doi:10.1016/j.dsr2.2018.05.020.
    Description: Ocean acidification (OA), driven by rising anthropogenic carbon dioxide (CO2), is rapidly advancing in the Pacific Arctic Region (PAR), producing conditions newly corrosive to biologically important carbonate minerals like aragonite. Naturally short linkages across the PAR food web mean that species-specific acidification stress can be rapidly transmitted across multiple trophic levels, resulting in widespread impacts. Therefore, it is critical to understand the formation, transport, and persistence of acidified conditions in the PAR in order to better understand and project potential impacts to this delicately balanced ecosystem. Here, we synthesize data from process studies across the PAR to show the formation of corrosive conditions in colder, denser winter-modified Pacific waters over shallow shelves, resulting from the combination of seasonal terrestrial and marine organic matter respiration with anthropogenic CO2. When these waters are subsequently transported off the shelf, they acidify the Pacific halocline. We estimate that Barrow Canyon outflow delivers ~2.24 Tg C yr-1 to the Arctic Ocean through corrosive winter water transport. This synthesis also allows the combination of spatial data with temporal data to show the persistence of these conditions in halocline waters. For example, one study in this synthesis indicated that 0.5–1.7 Tg C yr-1 may be returned to the atmosphere via air-sea gas exchange of CO2 during upwelling events along the Beaufort Sea shelf that bring Pacific halocline waters to the ocean surface. The loss of CO2 during these events is more than sufficient to eliminate corrosive conditions in the upwelled Pacific halocline waters. However, corresponding moored and discrete data records indicate that potentially corrosive Pacific waters are present in the Beaufort shelfbreak jet during 80% of the year, indicating that the persistence of acidified waters in the Pacific halocline far outweighs any seasonal mitigation from upwelling. Across the datasets in this large-scale synthesis, we estimate that the persistent corrosivity of the Pacific halocline is a recent phenomenon that appeared between 1975 and 1985. Over that short time, these potentially corrosive waters originating over the continental shelves have been observed as far as the entrances to Amundsen Gulf and M’Clure Strait in the Canadian Arctic Archipelago. The formation and transport of corrosive waters on the Pacific Arctic shelves may have widespread impact on the Arctic biogeochemical system and food web reaching all the way to the North Atlantic.
    Description: National Science Foundation Grant PLR-1303617.
    Keywords: Ocean acidification ; Pacific Arctic ; Arctic Ocean ; East Siberian Sea ; Chukchi Sea ; Beaufort Sea ; Transport ; Arctic Rivers ; Sea Ice ; Respiration ; Upwelling ; Biological vulnerability ; Community resilience
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  • 91
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Progress in Earth and Planetary Science 5 (2018): 74, doi:10.1186/s40645-018-0232-3.
    Description: South Chamorro Seamount (SCS) is a blueschist-bearing serpentinite mud volcano in the Mariana forearc. Previous scientific drilling conducted at SCS revealed highly alkaline, sulfate-rich formation fluids resulting from slab-derived fluid upwelling combined with serpentinization both beneath and within the seamount. In the present study, a time-series of ROV dives spanning 1000 days was conducted to collect discharging alkaline fluids from the cased Ocean Drilling Program (ODP) Hole 1200C (hereafter the CORK fluid). The CORK fluids were analyzed for chemical compositions (including dissolved gas) and microbial community composition/function. Compared to the ODP porewater, the CORK fluids were generally identical in concentration of major ions, with the exception of significant sulfate depletion and enrichment in sulfide, alkalinity, and methane. Microbiological analyses of the CORK fluids revealed little biomass and functional activity, despite habitable temperature conditions. The post-drilling sulfate depletion is likely attributable to sulfate reduction coupled with oxidation of methane (and hydrogen), probably triggered by the drilling and casing operations. Multiple lines of evidence suggest that abiotic organic synthesis associated with serpentinization is the most plausible source of the abundant methane in the CORK fluid. The SCS formation fluid regime presented here may represent the first example on Earth where abiotic syntheses are conspicuous with little biotic processes, despite a condition with sufficient bioavailable energy potentials and temperatures within the habitable range.
    Description: This work was partly supported by JSPS KAKENHI Grant Number 25701004 (SK).
    Keywords: Forearc serpentinite mud volcano ; South Chamorro Seamount ; Limit of biosphere ; Present-days’ chemical evolution ; Radio-isotope-tracer carbon assimilation estimation
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  • 92
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Scientific Reports 8 (2018): 11997, doi:10.1038/s41598-018-30091-8.
    Description: The abundance of organic carbon (OC) in vegetation and soils (~2,600 PgC) compared to carbon in the atmosphere (~830 PgC) highlights the importance of terrestrial OC in global carbon budgets. The residence time of OC in continental reservoirs, which sets the rates of carbon exchange between land and atmosphere, represents a key uncertainty in global carbon cycle dynamics. Retention of terrestrial OC can also distort bulk OC- and biomarker-based paleorecords, yet continental storage timescales remain poorly quantified. Using “bomb” radiocarbon (14C) from thermonuclear weapons testing as a tracer, we model leaf-wax fatty acid and bulk OC 14C signatures in a river-proximal marine sediment core from the Bay of Bengal in order to constrain OC storage timescales within the Ganges-Brahmaputra (G-B) watershed. Our model shows that 79–83% of the leaf-waxes in this core were stored in continental reservoirs for an average of 1,000–1,200 calendar years, while the remainder was stored for an average of 15 years. This age structure distorts high-resolution organic paleorecords across geologically rapid events, highlighting that compound-specific proxy approaches must consider storage timescales. Furthermore, these results show that future environmental change could destabilize large stores of old - yet reactive - OC currently stored in tropical basins.
    Description: We acknowledge funding support from the Agouron Institute Postdoctoral Fellowship (K.L.F), the US National Science Foundation (Awards: OCE-1333387 and OCE-13333826), the Investment in Science Fund given primarily by WHOI Trustee and Corporation Members, and the Swiss National Science Foundation (Award: 200020_163162).
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  • 93
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Scientific Reports 8 (2018): 13478, doi:10.1038/s41598-018-31175-1.
    Description: Agricultural intensification offers potential to grow more food while reducing the conversion of native ecosystems to croplands. However, intensification also risks environmental degradation through emissions of the greenhouse gas nitrous oxide (N2O) and nitrate leaching to ground and surface waters. Intensively-managed croplands and nitrogen (N) fertilizer use are expanding rapidly in tropical regions. We quantified fertilizer responses of maize yield, N2O emissions, and N leaching in an Amazon soybean-maize double-cropping system on deep, highly-weathered soils in Mato Grosso, Brazil. Application of N fertilizer above 80 kg N ha−1 yr−1 increased maize yield and N2O emissions only slightly. Unlike experiences in temperate regions, leached nitrate accumulated in deep soils with increased fertilizer and conversion to cropping at N fertilization rates 〉80 kg N ha−1, which exceeded maize demand. This raises new questions about the capacity of tropical agricultural soils to store nitrogen, which may determine when and how much nitrogen impacts surface waters.
    Description: This project was supported by grants from NSF (DEB-1257944, DEB-1257391, DEB1457017, EF-1541770, EF-1655432, EF-1519342, IOS-1660034, IOS-1457662, and EAR-1739724) to M. Macedo, C. Neill, and M.T. Coe.
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  • 94
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Remote Sensing of Environment 209 (2018): 677-699, doi:10.1016/j.rse.2018.02.075.
    Description: We analyse ten years of QuikSCAT satellite surface winds to statistically characterize the spatio-temporal variability of the westward mountain-gap wind jets over the northern Red Sea. These wind jets bring relatively cold and dry air from the Arabian Desert, increasing heat loss and evaporation over the region similar to cold-air outbreaks from mid and subpolar latitudes. QuikSCAT captures the spatial structure of the wind jets and agrees well with in situ observations from a heavily instrumented mooring in the northern Red Sea. The local linear correlations between QuikSCAT and in situ winds are 0.96 (speed) and 0.85 (direction). QuikSCAT also reveals that cross-axis winds such as the mountain-gap wind jets are a major component of the regional wind variability. The cross-axis wind pattern appears as the second (or third) mode in the four vector Empirical Orthogonal Function analyses we performed, explaining between 6% to 11% of the wind variance. Westward wind jets are typical in winter, especially in December and January, but with strong interannual variability. Several jets can occur simultaneously and cover a large latitudinal range of the northern Red Sea, which we call large-scale westward events. QuikSCAT recorded 18 large-scale events over ten years, with duration between 3 to 8 days and strengths varying from 3–4 to 9–10 m/s. These events cause large changes in the wind stress curl pattern, imposing a remarkable sequence of positive and negative curl along the Red Sea main axis, which might be a wind forcing mechanism for the oceanic mesoscale circulation.
    Description: This work was supported by NSF grant OCE-1435665 and NASA grant NNX14AM71G.
    Keywords: QuikSCAT ; Air-sea interaction ; Wind jets ; Mountain gap ; Evaporation ; Heat loss
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  • 95
    Publication Date: 2022-05-25
    Description: This paper is not subject to U.S. copyright. The definitive version was published in Coastal Engineering 136 (2018): 147-160, doi:10.1016/j.coastaleng.2018.01.003.
    Description: The performance of a linear depth inversion algorithm, cBathy, applied to coastal video imagery was assessed using observations of water depth from vessel-based hydrographic surveys and in-situ altimeters for a wide range of wave conditions (0.3 〈 significant wave height 〈 4.3 m) on a sandy Atlantic Ocean beach near Duck, North Carolina. Comparisons of video-based cBathy bathymetry with surveyed bathymetry were similar to previous studies (root mean square error (RMSE) = 0.75 m, bias = −0.26 m). However, the cross-shore locations of the surfzone sandbar in video-derived bathymetry were biased onshore 18–40 m relative to the survey when offshore wave heights exceeded 1.2 m or were greater than half of the bar crest depth, and broke over the sandbar. The onshore bias was 3–4 m when wave heights were less than 0.8 m and were not breaking over the sandbar. Comparisons of video-derived seafloor elevations with in-situ altimeter data at three locations onshore of, near, and offshore of the surfzone sandbar over ∼1 year provide the first assessment of the cBathy technique over a wide range of wave conditions. In the outer surf zone, video-derived results were consistent with long-term patterns of bathymetric change (r2 = 0.64, RMSE = 0.26 m, bias = −0.01 m), particularly when wave heights were less than 1.2 m (r2 = 0.83). However, during storms when wave heights exceeded 3 m, video-based cBathy over-estimated the depth by up to 2 m. Near the sandbar, the sign of depth errors depended on the location relative to wave breaking, with video-based depths overestimated (underestimated) offshore (onshore) of wave breaking in the surfzone. Wave speeds estimated by video-based cBathy at the initiation of wave breaking often were twice the speeds predicted by linear theory, and up to three times faster than linear theory during storms. Estimated wave speeds were half as fast as linear theory predictions at the termination of wave breaking shoreward of the sandbar. These results suggest that video-based cBathy should not be used to track the migration of the surfzone sandbar using data when waves are breaking over the bar nor to quantify morphological evolution during storms. However, these results show that during low energy conditions, cBathy estimates could be used to quantify seasonal patterns of seafloor evolution.
    Description: This research was funded by the U.S. Army Corps of Engineers Coastal Field Data Collection Program, the Deputy Assistant Secretary of the Army for Research and Technology under ERDC's research program titled “Force Projection Entry Operations, STO D.GRD.2015.34”, the U.S. Naval Research Laboratory base program from the Office of Naval Research, a Vannevar Bush Faculty Fellowship funded by the Assistant Secretary of Defense for Research and Engineering, and the National Science Foundation.
    Keywords: Remote sensing ; Beach morphology ; Depth inversion ; Bathymetry estimation ; Video imaging ; Surfzone
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  • 96
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Geochimica et Cosmochimica Acta 228 (2018): 95-118, doi:10.1016/j.gca.2018.01.021.
    Description: Hosted in basaltic substrate on the ultra-slow spreading Mid-Cayman Rise, the Piccard hydrothermal field is the deepest currently known seafloor hot-spring (4957–4987 m). Due to its great depth, the Piccard site is an excellent natural system for investigating the influence of extreme pressure on the formation of submarine vent fluids. To investigate the role of rock composition and deep circulation conditions on fluid chemistry, the abundance and isotopic composition of organic, inorganic, and dissolved volatile species in high temperature vent fluids at Piccard were examined in samples collected in 2012 and 2013. Fluids from the Beebe Vents and Beebe Woods black smokers vent at a maximum temperature of 398 °C at the seafloor, however several lines of evidence derived from inorganic chemistry (Cl, SiO2, Ca, Br, Fe, Cu, Mn) support fluid formation at much higher temperatures in the subsurface. These high temperatures, potentially in excess of 500 °C, are attainable due to the great depth of the system. Our data indicate that a single deep-rooted source fluid feeds high temperature vents across the entire Piccard field. High temperature Piccard fluid H2 abundances (19.9 mM) are even higher than those observed in many ultramafic-influenced systems, such as the Rainbow (16 mM) and the Von Damm hydrothermal fields (18.2 mM). In the case of Piccard, however, these extremely high H2 abundances can be generated from fluid-basalt reaction occurring at very high temperatures. Magmatic and thermogenic sources of carbon in the high temperature black smoker vents are described. Dissolved ΣCO2 is likely of magmatic origin, CH4 may originate from a combination of thermogenic sources and leaching of abiotic CH4 from mineral-hosted fluid inclusions, and CO abundances are at equilibrium with the water–gas shift reaction. Longer-chained n-alkanes (C2H6, C3H8, n-C4H10, i-C4H10) may derive from thermal alteration of dissolved and particulate organic carbon sourced from the original seawater source, entrainment of microbial ecosystems peripheral to high temperature venting, and/or abiotic mantle sources. Dissolved ΣHCOOH in the Beebe Woods fluid is consistent with thermodynamic equilibrium for abiotic production via ΣCO2 reduction with H2 at 354 °C measured temperature. A lack of ΣHCOOH in the relatively higher temperature 398 °C Beebe Vent fluids demonstrates the temperature sensitivity of this equilibrium. Abundant basaltic seafloor outcrops and the axial location of the vent field, along with multiple lines of geochemical evidence, support extremely high temperature fluid-rock reaction with mafic substrate as the dominant control on Piccard fluid chemistry. These results expand the known diversity of vent fluid composition, with implications for supporting microbiological life in both the modern and ancient ocean.
    Description: This work was supported by the National Aeronautics and Space Administration (NASA) Astrobiology Science and Technology for Exploring Planets program [award number NNX09AB75G to CRG and JSS]; and the National Science Foundation [award number OCE-1061863 to CRG and JSS].
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  • 97
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Earth and Planetary Science Letters 487 (2018): 165-178, doi:10.1016/j.epsl.2018.01.032.
    Description: A new geospeedometer is developed based on the differential closures of Mg and rare earth element (REE) bulk-diffusion between coexisting plagioclase and clinopyroxene. By coupling the two elements with distinct bulk closure temperatures, this speedometer can numerically solve the initial temperatures and cooling rates for individual rock samples. As the existing Mg-exchange thermometer was calibrated for a narrow temperature range and strongly relies on model-dependent silica activities, a new thermometer is developed using literature experimental data. When the bulk closure temperatures of Mg and REE are determined, respectively, using this new Mg-exchange thermometer and the existing REE-exchange thermometer, this speedometer can be implemented for a wide range of compositions, mineral modes, and grain sizes. Applications of this new geospeedometer to oceanic gabbros from the fast-spreading East Pacific Rise at Hess Deep reveal that the lower oceanic crust crystallized at temperatures of 998–1353 °C with cooling rates of 0.003–10.2 °C/yr. Stratigraphic variations of the cooling rates and crystallization temperatures support deep hydrothermal circulations and in situ solidification of various replenished magma bodies. Together with existing petrological, geochemical and geophysical evidence, results from this new speedometry suggest that the lower crust formation at fast-spreading mid-ocean ridges involves emplacement of primary mantle melts in the deep section of the crystal mush zone coupled with efficient heat removal by crustal-scale hydrothermal circulations. The replenished melts become chemically and thermally evolved, accumulate as small magma bodies at various depths, feed the shallow axial magma chamber, and may also escape from the mush zone to generate off-axial magma lenses.
    Description: C. Sun acknowledges support from the Devonshire postdoctoral scholarship at WHOI and NSF grant OCE-1637130. This work was also supported by Natural Environment Research Council (NERC) Grant NE/I001670/1 to J. Lissenberg.
    Keywords: Oceanic crust ; Cooling rate ; Crystallization temperature ; Plagioclase ; Clinopyroxene ; Hess Deep
    Repository Name: Woods Hole Open Access Server
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  • 98
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Scientific Reports 8 (2018): 10140, doi:10.1038/s41598-018-28455-1.
    Description: Haynesina germanica, an ubiquitous benthic foraminifer in intertidal mudflats, has the remarkable ability to isolate, sequester, and use chloroplasts from microalgae. The photosynthetic functionality of these kleptoplasts has been demonstrated by measuring photosystem II quantum efficiency and O2 production rates, but the precise role of the kleptoplasts in foraminiferal metabolism is poorly understood. Thus, the mechanism and dynamics of C and N assimilation and translocation from the kleptoplasts to the foraminiferal host requires study. The objective of this study was to investigate, using correlated TEM and NanoSIMS imaging, the assimilation of inorganic C and N (here ammonium, NH4+) in individuals of a kleptoplastic benthic foraminiferal species. H. germanica specimens were incubated for 20 h in artificial seawater enriched with H13CO3− and 15NH4+ during a light/dark cycle. All specimens (n = 12) incorporated 13C into their endoplasm stored primarily in the form of lipid droplets. A control incubation in darkness resulted in no 13C-uptake, strongly suggesting that photosynthesis is the process dominating inorganic C assimilation. Ammonium assimilation was observed both with and without light, with diffuse 15N-enrichment throughout the cytoplasm and distinct 15N-hotspots in fibrillar vesicles, electron-opaque bodies, tubulin paracrystals, bacterial associates, and, rarely and at moderate levels, in kleptoplasts. The latter observation might indicate that the kleptoplasts are involved in N assimilation. However, the higher N assimilation observed in the foraminiferal endoplasm incubated without light suggests that another cytoplasmic pathway is dominant, at least in darkness. This study clearly shows the advantage provided by the kleptoplasts as an additional source of carbon and provides observations of ammonium uptake by the foraminiferal cell.
    Description: This work was supported by the Swiss National Science Foundation (grant no. 200021_149333) and was part of the CNRS EC2CO-Lefe project ForChlo. It was also supported by the Region Pays de la Loire (Post-doc position of TJ, on FRESCO project) as well as the WHOI Robert W. Morse Chair for Excellence in Oceanography and The Investment in Science Fund at WHOI.
    Repository Name: Woods Hole Open Access Server
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  • 99
    Publication Date: 2022-05-25
    Description: The work is made available under the Creative Commons CCO public domain dedication.. The definitive version was published in PLoS Biology 16 (2018): e2006333, doi:10.1371/journal.pbio.2006333.
    Description: Our current understanding of biology is heavily based on a small number of genetically tractable model organisms. Most eukaryotic phyla lack such experimental models, and this limits our ability to explore the molecular mechanisms that ultimately define their biology, ecology, and diversity. In particular, marine protists suffer from a paucity of model organisms despite playing critical roles in global nutrient cycles, food webs, and climate. To address this deficit, an initiative was launched in 2015 to foster the development of ecologically and taxonomically diverse marine protist genetic models. The development of new models faces many barriers, some technical and others institutional, and this often discourages the risky, long-term effort that may be required. To lower these barriers and tackle the complexity of this effort, a highly collaborative community-based approach was taken. Herein, we describe this approach, the advances achieved, and the lessons learned by participants in this novel community-based model for research.
    Description: The research efforts, connections, and collaborations described in this paper and protocols.io (https://www.protocols.io/) were supported by the Gordon and Betty Moore Foundation’s Marine Microbiology Initiative.
    Repository Name: Woods Hole Open Access Server
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  • 100
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Scientific Reports 8 (2018): 13556, doi:10.1038/s41598-018-31710-0.
    Description: In mammals, a complex array of oral sensors assess the taste, temperature and haptic properties of food. Although the representation of taste has been extensively studied in the gustatory cortex, it is unclear how the somatosensory cortex encodes information about the properties of oral stimuli. Moreover, it is poorly understood how different oral sensory modalities are integrated and how sensory responses are translated into oral motor actions. To investigate whether oral somatosensory cortex processes food-related sensations and movements, we performed in vivo whole-cell recordings and motor mapping experiments in rats. Neurons in oral somatosensory cortex showed robust post-synaptic and sparse action potential responses to air puffs. Membrane potential showed that cold water evoked larger responses than room temperature or hot water. Most neurons showed no clear tuning of responses to bitter, sweet and neutral gustatory stimuli. Finally, motor mapping experiments with histological verification revealed an initiation of movements related to food consumption behavior, such as jaw opening and tongue protrusions. We conclude that somatosensory cortex: (i) provides a representation of the temperature of oral stimuli, (ii) does not systematically encode taste information and (iii) influences orofacial movements related to food consummatory behavior.
    Description: This work was supported by the Marine Biological Laboratory, Humboldt Universität zu Berlin and Neurocure.
    Repository Name: Woods Hole Open Access Server
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