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  • Nitrogen fixation
  • Triticum aestivum
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  • 1
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    MDPI - Multidisciplinary Digital Publishing Institute
    Publication Date: 2023-09-11
    Keywords: Laurus nobilis ; medicinal plant ; mobile genomic elements ; germplasm characterization ; Mediterranean region ; chloroplast ; Ipomoea batatas ; simple sequence repeat ; sweet potato ; plant germplasm ; landrace rice ; fat-soluble nutraceuticals ; β-sitosterol ; genetic variability ; cluster analysis ; Solanum melongena ; germplasm ; Greece ; islands ; mainland ; phenotyping ; genotyping ; mineral composition ; landraces ; genetic diversity ; genetic structure ; Panax ginseng ; Triticum turgidum ; HMW glutenins ; LMW glutenins ; gluten quality ; non-allelic interactions ; combined analysis ; evolution ; genetic resources ; Zea mays ; Blumeria graminis ; disomic addition line ; molecular cytogenetics ; wheat ; Psathyrostachys huashanica ; natural variation ; maize ; root length ; domestication selection ; ZmMADS60 gene ; genetic basis ; GWAS ; eating and cooking qualities ; rice ; genetic variation ; eggplant ; cropping condition ; yield ; agro-morphological characterization ; chili pepper ; gene bank ; molecular markers ; morphological descriptor ; DArTseq markers ; GBS ; Triticum aestivum ; starch ; SNP ; InDel ; CAPS ; intron-loss ; NGS ; phosphorus use efficiency ; phosphorus ; proteomics ; grain hardness ; PIN ; kernel texture ; triticum ; SKCS ; Cucumis sativum ; downy mildew ; genetics ; inheritance ; oomycetes ; resistance ; rice genotypes ; blast resistant genotype ; genotypic coefficient of variation (GCV) ; phenotypic coefficient of variation (PCV) ; heritability values ; DArT SNP markers ; early maturity ; heat and drought tolerance ; salt stress ; nitrogen metabolism ; oxidative stress response ; G6PDH ; GDH ; GS/GOGAT ; Triticum aestivum L. ; γ-gliadins ; Gli-B1 ; polymorphism ; PCR analysis ; ginseng ; genetic composition ; SSR ; fonio ; fonio millet ; white fonio ; Digitaria exilis ; agro morphological descriptors ; phenotypic diversity ; neglected and underutilized species (NUS) ; genetic improvement ; catechin ; phytochemicals ; targeted-oriented core collection ; tea germplasm ; agronomic performance ; correlation analysis ; malawi ; pigeonpea ; yield stability ; bermudagrass ; forage breeding ; genetic parameters ; genotype by harvest interaction ; Tifton 85 ; accessions ; descriptors ; anthracnose ; Colletotrichum lentis ; disease screening ; lentil ; plant resistance ; tall wild pea ; Pisum sativum subsp. elatius ; neoplasm ; pea weevil ; Bruchus pisorum ; expressivity ; Africa ; cowpea ; microsatellites ; Aegilops ; triticale ; leaf rust ; stripe rust ; yellow rust ; Puccinia ; drought ; Phaseolus vulgaris L. ; plant breeding ; rhizobia ; stress ; n/a ; bic Book Industry Communication::G Reference, information & interdisciplinary subjects::GP Research & information: general ; bic Book Industry Communication::P Mathematics & science::PS Biology, life sciences
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  • 2
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    MDPI - Multidisciplinary Digital Publishing Institute
    Publication Date: 2024-03-28
    Description: This reprint represents a general view of what and how the research on plants at the molecular level (genetics, genomics, transcriptomics, proteomics, metabolomics, and so on) contributes to a good equilibrium among human needs, food security, and future strategies for mitigating the effects of global climate changes. Now more than ever, it is critical to understand the genetics and evolution of the gene mechanisms and the networks of different molecular pathways acting on plant abiotic stress tolerance in order to find new solutions for modern agricultural problems.This reprint is full of technical and specialized terms and, for this reason, its target audience is scientists and students trained in plant functional genomics, breeding, agronomy, and genetics. It is an exciting virtual tour through plant molecular responses to various environmental stresses, and new ideas and applications will be derived.
    Keywords: environmental stress ; seed development ; site II element ; HSFA2 ; TT2/ MYB5-MBW complex ; triacontanol ; drought ; rice ; aquaporins ; PIP1,1, PIP1,2, PIP2,4 and PIP2,5 genes ; abiotic stress ; biotic stress ; crop improvement ; HD-ZIP ; plant development ; cold ; stress ; differentially expressed genes ; transcriptome ; transcription factors ; in silico ; Cis-regulatory elements ; gene transcription ; trehalose-6-phosphate phosphatase ; wheat ; early heat stress ; Triticum aestivum ; heat tolerance ; VRN ; PPD ; photoperiod ; Rosmarinus officinalis Lour. ; suspension cells ; MeJA ; antioxidant enzymes ; RNA-seq ; qRT-PCR ; durum wheat ; osmotic adjustment ; QTL ; climate change ; drought tolerance ; crop modelling ; expression profiles ; field trials ; TdDRF1 gene ; Wdhn13 ; n/a ; thema EDItEUR::G Reference, Information and Interdisciplinary subjects::GP Research and information: general ; thema EDItEUR::P Mathematics and Science::PS Biology, life sciences
    Language: English
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  • 3
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    MDPI - Multidisciplinary Digital Publishing Institute
    Publication Date: 2023-09-11
    Description: 10th Anniversary of Plants—Recent Advances and Perspectives is a scientific paper collection specially published on the anniversary of Plants. Covering all major areas of plant science, it is a valuable guide through current achievements and future discoveries in this scientific field.
    Keywords: Secale cereale ; Secale montanum ; Secale strictum ; QTL mapping ; molecular marker ; self-incompatibility ; fertility ; seed set ; abiotic stress ; cell homeostasis ; heterologous host synthetic approach ; terpenophenolics ; brown spot ; ACT ; fungus culture filtrate ; mycotoxin ; fruit development ; fruit gauge ; VPD ; Mangifera indica ; cell division ; cell expansion ; ripening ; pulegone ; isomenthone ; menthone ; thymol ; p-cymene ; chemotypes ; seasonal variation ; enantiomeric distribution ; label-free proteomics ; Panax ginseng ; ginsenosides ; cytochrome p450 ; UDP-glycosyltransferase ; MEP pathway ; MVA pathway ; TCA/acetone ; methanol/chloroform ; endophytes ; foliar pathogens ; pathogenicity ; taxonomy ; Thymus vulgaris ; Crithmum maritimum ; leather artifacts ; essential oils ; anti-bacterial activity ; Euphorbia dendroides L. ; aerial parts ; polyphenols ; antioxidant activity ; anti-inflammatory activity ; toxicity ; calcium oxalate crystals ; colleter ; extrafloral nectaries ; resin gland ; bud protection ; plant-environment interaction ; carbohydrate metabolism ; microarray ; crop ; rice ; productivity ; endosperm ; geometry ; morphology ; seed shape ; Vitaceae ; exDNA ; environmental DNA ; DNA sensing ; self-DNA inhibition ; autotoxicity ; plant response ; DAMP ; PAMP ; EDAP ; climate change ; food security ; Mediterranean countries ; sustainable exploitation ; phytogenetic resources ; candidate gene ; quantitative trait locus ; recombinant inbred line ; soybean drought tolerance ; weighted drought coefficient ; antioxidants ; biostimulants ; biotic stress ; GABA ; metabolism ; phytohormones ; reactive oxygen species ; signaling ; tricarboxylic acid cycle ; bacterial functions ; co-presence networks ; metagenomics ; microbial ecology ; plant domestication ; trace element ; plant nutrient ; salinity ; antioxidant defense system ; glyoxalase system ; biochar ; licorice ; soil enzymes ; nutrients ; root system ; ALS ; BCAA ; low oxygen ; flooding ; AIP1 ; Eucommia ulmoides Oliver ; trait variations ; probability grading ; quantitative traits ; planting models ; leaves ; cytokinin ; TD-K ; thidiazuron ; INCYDE ; CPPU ; isopentenyl transferase ; IPT ; cytokinin oxidase/dehydrogenase ; CKX ; wheat ; barley ; yield ; cucumber ; QTL-seq ; SNP markers ; white immature fruit skin color ; ecological costs ; germination models ; herbicide resistance ; hydrotime ; target-site resistance ; hydrogen peroxide ; sodium hypochlorite ; generalized regression neural network ; genetic algorithm ; scarification ; seed dormancy ; plant tissue culture ; foliar descriptors ; leaf area ; models ; vine leaves ; Olea europaea L. ; olive ; genotype by sequencing (GBS) ; single-nucleotide polymorphism (SNP) ; whole-genome sequencing (WGS) ; reference genome ; plastid markers ; DNA barcoding ; ISSR markers ; Egyptian barley ; agro-morphological traits ; cluster analysis ; genetic variation ; biplot ; drought stress ; drying processes ; mathematical model ; plant hydric stress tolerance ; rate of weight loss ; RWLMod ; water evaporation ; photosynthesis ; elevated CO2 ; Rubisco ; electron transport ; light ; diurnal cycle ; sexual propagation ; cold stratification ; in situ ; ex situ ; plant endemism ; Morocco ; biodiversity ; ex-situ conservation ; protocols ; germplasm ; forest berries ; brushing ; lettuce ; chicory ; phytochemicals ; antioxidant capacity ; Ziziphus lotus ; phenolics ; SH-SY5Y cell line ; chromatography ; Koelreuteria paniculata ; dry ethanol extracts ; GC-MS analysis ; chemical compounds ; antitumor and antimicrobial activities ; medicinal plant ; bioactive compounds ; plant-derived secondary metabolites (PDSM) ; cell suspension culture (CSC) ; bioreactor engineering ; apple ; Golden Delicious ; Top Red ; fruitlet thinners ; light reactions ; electron transport rate ; photoprotective mechanism ; state transitions ; PSII repair cycle ; vegetation structure ; environmental variables ; PC-ORD ; plant community assembly ; Himalaya ; allopolyploidy ; interspecific hybridization ; unreduced gametes ; cytological diploidization ; genomic changes ; root length ; root/shoot ratio ; specific root length ; Saragolle Lucana ; seed coating ; heavy metals ; evolution ; hyperaccumulation ; black chokeberry (Aronia melanocarpa) ; anthocyanin stability ; herbs ; co-pigmentation ; color stability ; functional foods/beverages ; biotechnological tools ; ethnomedicine ; in vitro culture ; genetic improvement ; pollen ; tip growth ; calcium ; calcium dependent protein kinase ; Rho Guanine Dissociation Inhibitor ; ROP GTPase ; RhoGDI displacement factor ; polarity ; guar ; gene expression ; qRT-PCR ; RNA-Seq ; salt stress ; salt tolerance ; stress ; transcriptome ; D-tagatose ; IFP48 ; induced resistance ; sweet immunity ; sugar-enhanced defense ; Plasmopara viticola ; Botrytis cinerea ; Vitis vinifera ; human diet ; edible wild plants ; Plantago coronopus L. ; Rumex acetosa L. ; Cichorium intybus L. ; Artemisia dracunculus L. ; phytochemistry ; anti-inflammatory properties ; stem photosynthesis ; hydraulic recovery ; soaking ; X-ray micro-CT ; bark water uptake ; embolism ; genetic resources ; Solanaceae ; Cucumis ; Lactuca ; diversity ; vegetables ; genebank ; essential oil ; iNOS ; interleukin ; lavenders ; NF-κB ; glycosyltransferases ; ER-Golgi trafficking ; mechanism of protein sorting ; COPI and COPII complexes ; sequences and motifs involved in trafficking ; Arabidopsis ; gene regulation ; protein-protein interaction ; transcription factor ; WRI1 ; TCP20 ; lipases ; lipid metabolism ; plant-environment interactions ; reproductive development ; vegetative development ; Urtica dioica ; soilless systems ; cultivated nettle ; stress factors ; functional properties ; preharvest sprouting ; MKK3 ; maternal and paternal expressed genes ; imprinted genes ; polycomb repressive complex 2 ; mRNA processing bodies ; ribonucleic binding proteins ; monosomes ; ethylene ; elicitors ; fruit ripening ; ACC synthase/oxidase ; GC-MS ; polyamines ; Vigna genus ; introgression ; hybridisation ; phylogeny ; de novo domestication ; feralisation ; novel ecosystems ; complex networks ; tree communities ; Lantana camara ; Prosopis juliflora ; ascorbic acid ; genetic diversity ; molecular markers ; aquaculture pond sediment ; recovery ; Triticum aestivum ; chlorophyll fluorescence ; wheat grass juice quality ; UV-B radiation ; olive tree ; metabolomic ; phenolic profile ; lipophilic profile ; ecophysiology ; environment ; arbuscular mycorrhizal symbiosis ; comparative transcriptomics ; Arum-type ; Paris-type ; Solanum lycopersicum ; Rhizophagus irregularis ; Gigaspora margarita ; Camelina sativa ; semi-arid lands ; biofuel feedstock ; biodiesel ; renewable diesel ; crop breeding ; transgenesis ; genome editing ; Xanthomonas euvesicatoria ; host associate factor ; comparative genomics ; Cannabis sativa L. ; chemovars ; secondary metabolites ; trichomes ; residual by-products ; biogeography ; cardioid ; islands ; geometric models ; Mediterranean flora ; Silene ; super-ellipse ; abscisic acid ; aromatic herb ; ascorbate-glutathione cycle ; jasmonic acid ; lipoic acid ; oxidative stress ; salicylic acid ; Salvia officinalis ; drought ; state of stress ; tolerance ; avoidance ; stress survival ; amino acids ; nitrate reductase ; glutamine synthetase ; plants mycorrhized ; dark septate ; Daphne genkwa ; Thymelaeaceae ; flavonoids ; design of experiments ; blooming stages ; germination stimulant ; witchweed ; methyl phenlactonoates (MPs) ; Nijmegen-1 ; weed ; plant development ; vasculature ; leaf traces ; structure ; microtomography ; Euphorbiaceae ; in vitro crop ; gamma radiation ; ionizing radiation ; mutants ; Fumaria scheleicheri Soy. Will. ; isoquinoline alkaloids ; HPLC-DAD ; in vitro anti-cholinesterase ; cytotoxic ; antioxidant ; ABC model ; hop ; transcription factors ; type-II MADS box ; type-I MADS-box ; AFLP ; carpological traits ; genetic structure ; molecular systematics ; plastid phylogeny ; Valerianaceae ; auxins ; embryogenic calli ; HPLC ; IAA ; immunohistochemistry ; deficit irrigation ; grape quality ; phenology ; plant diseases ; bacterium ; symptoms ; molecular classification ; common juniper ; common larch ; Cupressaceae ; Pinaceae ; SPME-GC-MS ; volatile compounds ; herbicidal activity ; weed control ; trait association ; GCV ; genetic variability ; genetic advance ; heritability ; PCV ; Cicer arietinum L. ; gold nanoparticles ; carbon nanotubes ; ATR-FTIR spectroscopy ; machine learning techniques ; principal component analysis ; support vector machine classification ; citrus ; melanose ; Diaporthe citri ; epidemiology ; symptomatology ; Pseudomonas cannabina pv. alisalensis ; resistance-nodulation-cell division transporter ; type-three secretion system ; phytoalexin ; brassinin ; glucosinolate ; cabbage ; flowering ; juvenile traits ; genetic stability ; flow cytometry ; somaclonal variation ; thorniness ; carbohydrates ; protein ; lipids ; fatty acids ; minerals ; plastome ; Plicosepalus acaciae ; Plicosepalus curviflorus ; loranthaceae ; mistletoe ; phylogenetic relationship ; plastome structure ; comparative analysis ; magnetic resonance imaging ; Solanum tuberosum ; multi-exponential transverse relaxation ; water stress ; broccoli ; human nutrition ; improved health ; melatonin ; postharvest ; apricot ; pollen tube ; pollination ; Prunus armeniaca ; S-alleles ; Populus ; hexokinase ; sucrose metabolism ; sugar signaling ; stress and defense ; centres of origin ; crop wild relatives ; crop domestication ; cryopreservation ; conservation ; in vitro storage ; ecosystem restoration ; plant breeding ; acidification ; alkalinisation ; bud burst ; freezing ; Malus domestica ; pH ; Picea abies ; Pinus cembra ; histone modification ; Taraxacum kok-saghyz ; natural rubber ; high light stress ; singlet oxygen ; signalling ; GPX5 ; beta cyclocitral ; acrolein ; glutathione peroxidase ; carbonyl ; transcription ; SLIM1 transcription factor ; sulfur deficiency ; Arabidopsis thaliana ; sulfate transporter ; sulfate assimilation ; stress tolerance ; LRR-RLK receptors ; dodders ; parasitic plants ; proteomics ; virus vertical transmission ; CMV-Fny strain ; pseudorecombinant virus ; chimeric virus ; infection rate ; seed-growth tests ; electron microscopy ; circular dichroism spectroscopy ; viral assembly ; Adiantetea capilli-veneris ; demographic analysis ; ecology ; IUCN ; plant conservation ; phytosociology ; rupicolous habitat ; n/a ; bic Book Industry Communication::G Reference, information & interdisciplinary subjects::GP Research & information: general ; bic Book Industry Communication::P Mathematics & science::PS Biology, life sciences
    Language: English
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  • 4
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    MDPI - Multidisciplinary Digital Publishing Institute
    Publication Date: 2023-09-11
    Description: 10th Anniversary of Plants—Recent Advances and Perspectives is a scientific paper collection specially published on the anniversary of Plants. Covering all major areas of plant science, it is a valuable guide through current achievements and future discoveries in this scientific field.
    Keywords: Secale cereale ; Secale montanum ; Secale strictum ; QTL mapping ; molecular marker ; self-incompatibility ; fertility ; seed set ; abiotic stress ; cell homeostasis ; heterologous host synthetic approach ; terpenophenolics ; brown spot ; ACT ; fungus culture filtrate ; mycotoxin ; fruit development ; fruit gauge ; VPD ; Mangifera indica ; cell division ; cell expansion ; ripening ; pulegone ; isomenthone ; menthone ; thymol ; p-cymene ; chemotypes ; seasonal variation ; enantiomeric distribution ; label-free proteomics ; Panax ginseng ; ginsenosides ; cytochrome p450 ; UDP-glycosyltransferase ; MEP pathway ; MVA pathway ; TCA/acetone ; methanol/chloroform ; endophytes ; foliar pathogens ; pathogenicity ; taxonomy ; Thymus vulgaris ; Crithmum maritimum ; leather artifacts ; essential oils ; anti-bacterial activity ; Euphorbia dendroides L. ; aerial parts ; polyphenols ; antioxidant activity ; anti-inflammatory activity ; toxicity ; calcium oxalate crystals ; colleter ; extrafloral nectaries ; resin gland ; bud protection ; plant-environment interaction ; carbohydrate metabolism ; microarray ; crop ; rice ; productivity ; endosperm ; geometry ; morphology ; seed shape ; Vitaceae ; exDNA ; environmental DNA ; DNA sensing ; self-DNA inhibition ; autotoxicity ; plant response ; DAMP ; PAMP ; EDAP ; climate change ; food security ; Mediterranean countries ; sustainable exploitation ; phytogenetic resources ; candidate gene ; quantitative trait locus ; recombinant inbred line ; soybean drought tolerance ; weighted drought coefficient ; antioxidants ; biostimulants ; biotic stress ; GABA ; metabolism ; phytohormones ; reactive oxygen species ; signaling ; tricarboxylic acid cycle ; bacterial functions ; co-presence networks ; metagenomics ; microbial ecology ; plant domestication ; trace element ; plant nutrient ; salinity ; antioxidant defense system ; glyoxalase system ; biochar ; licorice ; soil enzymes ; nutrients ; root system ; ALS ; BCAA ; low oxygen ; flooding ; AIP1 ; Eucommia ulmoides Oliver ; trait variations ; probability grading ; quantitative traits ; planting models ; leaves ; cytokinin ; TD-K ; thidiazuron ; INCYDE ; CPPU ; isopentenyl transferase ; IPT ; cytokinin oxidase/dehydrogenase ; CKX ; wheat ; barley ; yield ; cucumber ; QTL-seq ; SNP markers ; white immature fruit skin color ; ecological costs ; germination models ; herbicide resistance ; hydrotime ; target-site resistance ; hydrogen peroxide ; sodium hypochlorite ; generalized regression neural network ; genetic algorithm ; scarification ; seed dormancy ; plant tissue culture ; foliar descriptors ; leaf area ; models ; vine leaves ; Olea europaea L. ; olive ; genotype by sequencing (GBS) ; single-nucleotide polymorphism (SNP) ; whole-genome sequencing (WGS) ; reference genome ; plastid markers ; DNA barcoding ; ISSR markers ; Egyptian barley ; agro-morphological traits ; cluster analysis ; genetic variation ; biplot ; drought stress ; drying processes ; mathematical model ; plant hydric stress tolerance ; rate of weight loss ; RWLMod ; water evaporation ; photosynthesis ; elevated CO2 ; Rubisco ; electron transport ; light ; diurnal cycle ; sexual propagation ; cold stratification ; in situ ; ex situ ; plant endemism ; Morocco ; biodiversity ; ex-situ conservation ; protocols ; germplasm ; forest berries ; brushing ; lettuce ; chicory ; phytochemicals ; antioxidant capacity ; Ziziphus lotus ; phenolics ; SH-SY5Y cell line ; chromatography ; Koelreuteria paniculata ; dry ethanol extracts ; GC-MS analysis ; chemical compounds ; antitumor and antimicrobial activities ; medicinal plant ; bioactive compounds ; plant-derived secondary metabolites (PDSM) ; cell suspension culture (CSC) ; bioreactor engineering ; apple ; Golden Delicious ; Top Red ; fruitlet thinners ; light reactions ; electron transport rate ; photoprotective mechanism ; state transitions ; PSII repair cycle ; vegetation structure ; environmental variables ; PC-ORD ; plant community assembly ; Himalaya ; allopolyploidy ; interspecific hybridization ; unreduced gametes ; cytological diploidization ; genomic changes ; root length ; root/shoot ratio ; specific root length ; Saragolle Lucana ; seed coating ; heavy metals ; evolution ; hyperaccumulation ; black chokeberry (Aronia melanocarpa) ; anthocyanin stability ; herbs ; co-pigmentation ; color stability ; functional foods/beverages ; biotechnological tools ; ethnomedicine ; in vitro culture ; genetic improvement ; pollen ; tip growth ; calcium ; calcium dependent protein kinase ; Rho Guanine Dissociation Inhibitor ; ROP GTPase ; RhoGDI displacement factor ; polarity ; guar ; gene expression ; qRT-PCR ; RNA-Seq ; salt stress ; salt tolerance ; stress ; transcriptome ; D-tagatose ; IFP48 ; induced resistance ; sweet immunity ; sugar-enhanced defense ; Plasmopara viticola ; Botrytis cinerea ; Vitis vinifera ; human diet ; edible wild plants ; Plantago coronopus L. ; Rumex acetosa L. ; Cichorium intybus L. ; Artemisia dracunculus L. ; phytochemistry ; anti-inflammatory properties ; stem photosynthesis ; hydraulic recovery ; soaking ; X-ray micro-CT ; bark water uptake ; embolism ; genetic resources ; Solanaceae ; Cucumis ; Lactuca ; diversity ; vegetables ; genebank ; essential oil ; iNOS ; interleukin ; lavenders ; NF-κB ; glycosyltransferases ; ER-Golgi trafficking ; mechanism of protein sorting ; COPI and COPII complexes ; sequences and motifs involved in trafficking ; Arabidopsis ; gene regulation ; protein-protein interaction ; transcription factor ; WRI1 ; TCP20 ; lipases ; lipid metabolism ; plant-environment interactions ; reproductive development ; vegetative development ; Urtica dioica ; soilless systems ; cultivated nettle ; stress factors ; functional properties ; preharvest sprouting ; MKK3 ; maternal and paternal expressed genes ; imprinted genes ; polycomb repressive complex 2 ; mRNA processing bodies ; ribonucleic binding proteins ; monosomes ; ethylene ; elicitors ; fruit ripening ; ACC synthase/oxidase ; GC-MS ; polyamines ; Vigna genus ; introgression ; hybridisation ; phylogeny ; de novo domestication ; feralisation ; novel ecosystems ; complex networks ; tree communities ; Lantana camara ; Prosopis juliflora ; ascorbic acid ; genetic diversity ; molecular markers ; aquaculture pond sediment ; recovery ; Triticum aestivum ; chlorophyll fluorescence ; wheat grass juice quality ; UV-B radiation ; olive tree ; metabolomic ; phenolic profile ; lipophilic profile ; ecophysiology ; environment ; arbuscular mycorrhizal symbiosis ; comparative transcriptomics ; Arum-type ; Paris-type ; Solanum lycopersicum ; Rhizophagus irregularis ; Gigaspora margarita ; Camelina sativa ; semi-arid lands ; biofuel feedstock ; biodiesel ; renewable diesel ; crop breeding ; transgenesis ; genome editing ; Xanthomonas euvesicatoria ; host associate factor ; comparative genomics ; Cannabis sativa L. ; chemovars ; secondary metabolites ; trichomes ; residual by-products ; biogeography ; cardioid ; islands ; geometric models ; Mediterranean flora ; Silene ; super-ellipse ; abscisic acid ; aromatic herb ; ascorbate-glutathione cycle ; jasmonic acid ; lipoic acid ; oxidative stress ; salicylic acid ; Salvia officinalis ; drought ; state of stress ; tolerance ; avoidance ; stress survival ; amino acids ; nitrate reductase ; glutamine synthetase ; plants mycorrhized ; dark septate ; Daphne genkwa ; Thymelaeaceae ; flavonoids ; design of experiments ; blooming stages ; germination stimulant ; witchweed ; methyl phenlactonoates (MPs) ; Nijmegen-1 ; weed ; plant development ; vasculature ; leaf traces ; structure ; microtomography ; Euphorbiaceae ; in vitro crop ; gamma radiation ; ionizing radiation ; mutants ; Fumaria scheleicheri Soy. Will. ; isoquinoline alkaloids ; HPLC-DAD ; in vitro anti-cholinesterase ; cytotoxic ; antioxidant ; ABC model ; hop ; transcription factors ; type-II MADS box ; type-I MADS-box ; AFLP ; carpological traits ; genetic structure ; molecular systematics ; plastid phylogeny ; Valerianaceae ; auxins ; embryogenic calli ; HPLC ; IAA ; immunohistochemistry ; deficit irrigation ; grape quality ; phenology ; plant diseases ; bacterium ; symptoms ; molecular classification ; common juniper ; common larch ; Cupressaceae ; Pinaceae ; SPME-GC-MS ; volatile compounds ; herbicidal activity ; weed control ; trait association ; GCV ; genetic variability ; genetic advance ; heritability ; PCV ; Cicer arietinum L. ; gold nanoparticles ; carbon nanotubes ; ATR-FTIR spectroscopy ; machine learning techniques ; principal component analysis ; support vector machine classification ; citrus ; melanose ; Diaporthe citri ; epidemiology ; symptomatology ; Pseudomonas cannabina pv. alisalensis ; resistance-nodulation-cell division transporter ; type-three secretion system ; phytoalexin ; brassinin ; glucosinolate ; cabbage ; flowering ; juvenile traits ; genetic stability ; flow cytometry ; somaclonal variation ; thorniness ; carbohydrates ; protein ; lipids ; fatty acids ; minerals ; plastome ; Plicosepalus acaciae ; Plicosepalus curviflorus ; loranthaceae ; mistletoe ; phylogenetic relationship ; plastome structure ; comparative analysis ; magnetic resonance imaging ; Solanum tuberosum ; multi-exponential transverse relaxation ; water stress ; broccoli ; human nutrition ; improved health ; melatonin ; postharvest ; apricot ; pollen tube ; pollination ; Prunus armeniaca ; S-alleles ; Populus ; hexokinase ; sucrose metabolism ; sugar signaling ; stress and defense ; centres of origin ; crop wild relatives ; crop domestication ; cryopreservation ; conservation ; in vitro storage ; ecosystem restoration ; plant breeding ; acidification ; alkalinisation ; bud burst ; freezing ; Malus domestica ; pH ; Picea abies ; Pinus cembra ; histone modification ; Taraxacum kok-saghyz ; natural rubber ; high light stress ; singlet oxygen ; signalling ; GPX5 ; beta cyclocitral ; acrolein ; glutathione peroxidase ; carbonyl ; transcription ; SLIM1 transcription factor ; sulfur deficiency ; Arabidopsis thaliana ; sulfate transporter ; sulfate assimilation ; stress tolerance ; LRR-RLK receptors ; dodders ; parasitic plants ; proteomics ; virus vertical transmission ; CMV-Fny strain ; pseudorecombinant virus ; chimeric virus ; infection rate ; seed-growth tests ; electron microscopy ; circular dichroism spectroscopy ; viral assembly ; Adiantetea capilli-veneris ; demographic analysis ; ecology ; IUCN ; plant conservation ; phytosociology ; rupicolous habitat ; n/a ; bic Book Industry Communication::G Reference, information & interdisciplinary subjects::GP Research & information: general ; bic Book Industry Communication::P Mathematics & science::PS Biology, life sciences
    Language: English
    Format: application/octet-stream
    Location Call Number Expected Availability
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  • 5
    facet.materialart.
    Unknown
    MDPI - Multidisciplinary Digital Publishing Institute
    Publication Date: 2023-09-11
    Description: 10th Anniversary of Plants—Recent Advances and Perspectives is a scientific paper collection specially published on the anniversary of Plants. Covering all major areas of plant science, it is a valuable guide through current achievements and future discoveries in this scientific field.
    Keywords: Secale cereale ; Secale montanum ; Secale strictum ; QTL mapping ; molecular marker ; self-incompatibility ; fertility ; seed set ; abiotic stress ; cell homeostasis ; heterologous host synthetic approach ; terpenophenolics ; brown spot ; ACT ; fungus culture filtrate ; mycotoxin ; fruit development ; fruit gauge ; VPD ; Mangifera indica ; cell division ; cell expansion ; ripening ; pulegone ; isomenthone ; menthone ; thymol ; p-cymene ; chemotypes ; seasonal variation ; enantiomeric distribution ; label-free proteomics ; Panax ginseng ; ginsenosides ; cytochrome p450 ; UDP-glycosyltransferase ; MEP pathway ; MVA pathway ; TCA/acetone ; methanol/chloroform ; endophytes ; foliar pathogens ; pathogenicity ; taxonomy ; Thymus vulgaris ; Crithmum maritimum ; leather artifacts ; essential oils ; anti-bacterial activity ; Euphorbia dendroides L. ; aerial parts ; polyphenols ; antioxidant activity ; anti-inflammatory activity ; toxicity ; calcium oxalate crystals ; colleter ; extrafloral nectaries ; resin gland ; bud protection ; plant-environment interaction ; carbohydrate metabolism ; microarray ; crop ; rice ; productivity ; endosperm ; geometry ; morphology ; seed shape ; Vitaceae ; exDNA ; environmental DNA ; DNA sensing ; self-DNA inhibition ; autotoxicity ; plant response ; DAMP ; PAMP ; EDAP ; climate change ; food security ; Mediterranean countries ; sustainable exploitation ; phytogenetic resources ; candidate gene ; quantitative trait locus ; recombinant inbred line ; soybean drought tolerance ; weighted drought coefficient ; antioxidants ; biostimulants ; biotic stress ; GABA ; metabolism ; phytohormones ; reactive oxygen species ; signaling ; tricarboxylic acid cycle ; bacterial functions ; co-presence networks ; metagenomics ; microbial ecology ; plant domestication ; trace element ; plant nutrient ; salinity ; antioxidant defense system ; glyoxalase system ; biochar ; licorice ; soil enzymes ; nutrients ; root system ; ALS ; BCAA ; low oxygen ; flooding ; AIP1 ; Eucommia ulmoides Oliver ; trait variations ; probability grading ; quantitative traits ; planting models ; leaves ; cytokinin ; TD-K ; thidiazuron ; INCYDE ; CPPU ; isopentenyl transferase ; IPT ; cytokinin oxidase/dehydrogenase ; CKX ; wheat ; barley ; yield ; cucumber ; QTL-seq ; SNP markers ; white immature fruit skin color ; ecological costs ; germination models ; herbicide resistance ; hydrotime ; target-site resistance ; hydrogen peroxide ; sodium hypochlorite ; generalized regression neural network ; genetic algorithm ; scarification ; seed dormancy ; plant tissue culture ; foliar descriptors ; leaf area ; models ; vine leaves ; Olea europaea L. ; olive ; genotype by sequencing (GBS) ; single-nucleotide polymorphism (SNP) ; whole-genome sequencing (WGS) ; reference genome ; plastid markers ; DNA barcoding ; ISSR markers ; Egyptian barley ; agro-morphological traits ; cluster analysis ; genetic variation ; biplot ; drought stress ; drying processes ; mathematical model ; plant hydric stress tolerance ; rate of weight loss ; RWLMod ; water evaporation ; photosynthesis ; elevated CO2 ; Rubisco ; electron transport ; light ; diurnal cycle ; sexual propagation ; cold stratification ; in situ ; ex situ ; plant endemism ; Morocco ; biodiversity ; ex-situ conservation ; protocols ; germplasm ; forest berries ; brushing ; lettuce ; chicory ; phytochemicals ; antioxidant capacity ; Ziziphus lotus ; phenolics ; SH-SY5Y cell line ; chromatography ; Koelreuteria paniculata ; dry ethanol extracts ; GC-MS analysis ; chemical compounds ; antitumor and antimicrobial activities ; medicinal plant ; bioactive compounds ; plant-derived secondary metabolites (PDSM) ; cell suspension culture (CSC) ; bioreactor engineering ; apple ; Golden Delicious ; Top Red ; fruitlet thinners ; light reactions ; electron transport rate ; photoprotective mechanism ; state transitions ; PSII repair cycle ; vegetation structure ; environmental variables ; PC-ORD ; plant community assembly ; Himalaya ; allopolyploidy ; interspecific hybridization ; unreduced gametes ; cytological diploidization ; genomic changes ; root length ; root/shoot ratio ; specific root length ; Saragolle Lucana ; seed coating ; heavy metals ; evolution ; hyperaccumulation ; black chokeberry (Aronia melanocarpa) ; anthocyanin stability ; herbs ; co-pigmentation ; color stability ; functional foods/beverages ; biotechnological tools ; ethnomedicine ; in vitro culture ; genetic improvement ; pollen ; tip growth ; calcium ; calcium dependent protein kinase ; Rho Guanine Dissociation Inhibitor ; ROP GTPase ; RhoGDI displacement factor ; polarity ; guar ; gene expression ; qRT-PCR ; RNA-Seq ; salt stress ; salt tolerance ; stress ; transcriptome ; D-tagatose ; IFP48 ; induced resistance ; sweet immunity ; sugar-enhanced defense ; Plasmopara viticola ; Botrytis cinerea ; Vitis vinifera ; human diet ; edible wild plants ; Plantago coronopus L. ; Rumex acetosa L. ; Cichorium intybus L. ; Artemisia dracunculus L. ; phytochemistry ; anti-inflammatory properties ; stem photosynthesis ; hydraulic recovery ; soaking ; X-ray micro-CT ; bark water uptake ; embolism ; genetic resources ; Solanaceae ; Cucumis ; Lactuca ; diversity ; vegetables ; genebank ; essential oil ; iNOS ; interleukin ; lavenders ; NF-κB ; glycosyltransferases ; ER-Golgi trafficking ; mechanism of protein sorting ; COPI and COPII complexes ; sequences and motifs involved in trafficking ; Arabidopsis ; gene regulation ; protein-protein interaction ; transcription factor ; WRI1 ; TCP20 ; lipases ; lipid metabolism ; plant-environment interactions ; reproductive development ; vegetative development ; Urtica dioica ; soilless systems ; cultivated nettle ; stress factors ; functional properties ; preharvest sprouting ; MKK3 ; maternal and paternal expressed genes ; imprinted genes ; polycomb repressive complex 2 ; mRNA processing bodies ; ribonucleic binding proteins ; monosomes ; ethylene ; elicitors ; fruit ripening ; ACC synthase/oxidase ; GC-MS ; polyamines ; Vigna genus ; introgression ; hybridisation ; phylogeny ; de novo domestication ; feralisation ; novel ecosystems ; complex networks ; tree communities ; Lantana camara ; Prosopis juliflora ; ascorbic acid ; genetic diversity ; molecular markers ; aquaculture pond sediment ; recovery ; Triticum aestivum ; chlorophyll fluorescence ; wheat grass juice quality ; UV-B radiation ; olive tree ; metabolomic ; phenolic profile ; lipophilic profile ; ecophysiology ; environment ; arbuscular mycorrhizal symbiosis ; comparative transcriptomics ; Arum-type ; Paris-type ; Solanum lycopersicum ; Rhizophagus irregularis ; Gigaspora margarita ; Camelina sativa ; semi-arid lands ; biofuel feedstock ; biodiesel ; renewable diesel ; crop breeding ; transgenesis ; genome editing ; Xanthomonas euvesicatoria ; host associate factor ; comparative genomics ; Cannabis sativa L. ; chemovars ; secondary metabolites ; trichomes ; residual by-products ; biogeography ; cardioid ; islands ; geometric models ; Mediterranean flora ; Silene ; super-ellipse ; abscisic acid ; aromatic herb ; ascorbate-glutathione cycle ; jasmonic acid ; lipoic acid ; oxidative stress ; salicylic acid ; Salvia officinalis ; drought ; state of stress ; tolerance ; avoidance ; stress survival ; amino acids ; nitrate reductase ; glutamine synthetase ; plants mycorrhized ; dark septate ; Daphne genkwa ; Thymelaeaceae ; flavonoids ; design of experiments ; blooming stages ; germination stimulant ; witchweed ; methyl phenlactonoates (MPs) ; Nijmegen-1 ; weed ; plant development ; vasculature ; leaf traces ; structure ; microtomography ; Euphorbiaceae ; in vitro crop ; gamma radiation ; ionizing radiation ; mutants ; Fumaria scheleicheri Soy. Will. ; isoquinoline alkaloids ; HPLC-DAD ; in vitro anti-cholinesterase ; cytotoxic ; antioxidant ; ABC model ; hop ; transcription factors ; type-II MADS box ; type-I MADS-box ; AFLP ; carpological traits ; genetic structure ; molecular systematics ; plastid phylogeny ; Valerianaceae ; auxins ; embryogenic calli ; HPLC ; IAA ; immunohistochemistry ; deficit irrigation ; grape quality ; phenology ; plant diseases ; bacterium ; symptoms ; molecular classification ; common juniper ; common larch ; Cupressaceae ; Pinaceae ; SPME-GC-MS ; volatile compounds ; herbicidal activity ; weed control ; trait association ; GCV ; genetic variability ; genetic advance ; heritability ; PCV ; Cicer arietinum L. ; gold nanoparticles ; carbon nanotubes ; ATR-FTIR spectroscopy ; machine learning techniques ; principal component analysis ; support vector machine classification ; citrus ; melanose ; Diaporthe citri ; epidemiology ; symptomatology ; Pseudomonas cannabina pv. alisalensis ; resistance-nodulation-cell division transporter ; type-three secretion system ; phytoalexin ; brassinin ; glucosinolate ; cabbage ; flowering ; juvenile traits ; genetic stability ; flow cytometry ; somaclonal variation ; thorniness ; carbohydrates ; protein ; lipids ; fatty acids ; minerals ; plastome ; Plicosepalus acaciae ; Plicosepalus curviflorus ; loranthaceae ; mistletoe ; phylogenetic relationship ; plastome structure ; comparative analysis ; magnetic resonance imaging ; Solanum tuberosum ; multi-exponential transverse relaxation ; water stress ; broccoli ; human nutrition ; improved health ; melatonin ; postharvest ; apricot ; pollen tube ; pollination ; Prunus armeniaca ; S-alleles ; Populus ; hexokinase ; sucrose metabolism ; sugar signaling ; stress and defense ; centres of origin ; crop wild relatives ; crop domestication ; cryopreservation ; conservation ; in vitro storage ; ecosystem restoration ; plant breeding ; acidification ; alkalinisation ; bud burst ; freezing ; Malus domestica ; pH ; Picea abies ; Pinus cembra ; histone modification ; Taraxacum kok-saghyz ; natural rubber ; high light stress ; singlet oxygen ; signalling ; GPX5 ; beta cyclocitral ; acrolein ; glutathione peroxidase ; carbonyl ; transcription ; SLIM1 transcription factor ; sulfur deficiency ; Arabidopsis thaliana ; sulfate transporter ; sulfate assimilation ; stress tolerance ; LRR-RLK receptors ; dodders ; parasitic plants ; proteomics ; virus vertical transmission ; CMV-Fny strain ; pseudorecombinant virus ; chimeric virus ; infection rate ; seed-growth tests ; electron microscopy ; circular dichroism spectroscopy ; viral assembly ; Adiantetea capilli-veneris ; demographic analysis ; ecology ; IUCN ; plant conservation ; phytosociology ; rupicolous habitat ; n/a ; bic Book Industry Communication::G Reference, information & interdisciplinary subjects::GP Research & information: general ; bic Book Industry Communication::P Mathematics & science::PS Biology, life sciences
    Language: English
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  • 6
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    MDPI - Multidisciplinary Digital Publishing Institute
    Publication Date: 2022-10-25
    Description: Over the last few years, the subject of food authenticity and food fraud has received increasing attention from consumers and other stakeholders, such as government agencies and policymakers, control labs, producers, industry, and the research community. Among the different approaches aiming to identify, tackle, and/or deter fraudulent practices in the agri-food sector, the development of new, fast, and accurate methodologies to evaluate food authenticity is of major importance. This book, entitled “Target and Non-Target Approaches for Food Authenticity and Traceability”, gathers original research and review papers focusing on the development and application of both targeted and non-targeted methodologies applied to verify food authenticity and traceability. The contributions regard different foods, among which some are frequently considered as the most prone to adulteration, such as olive oil, honey, meat, and fish. This book is intended for readers aiming to enrich their knowledge through reading contemporary and multidisciplinary papers on the topic of food authentication.
    Keywords: COIBar–RFLP (cytochrome oxidase I barcode–restriction fragment length polymorphism) ; seafood ; fraud ; DNA barcoding ; food authenticity ; food adulteration ; food fraud ; donkey ; cytochrome b ; real-time PCR ; meat products ; honey ; regional origin ; chemometric analysis ; mineral content ; Montenegro ; Sepia ; common cuttlefish ; Sepia officinalis ; real-time PCR (Polymerase Chain Reaction) ; species identification ; food authentication ; COI (Cytochrome Oxidase I) ; Olea europaea var Sylvestris ; oleaster ; olive ; olive oil ; adulteration ; SNP ; DNA ; virgin olive oil ; quality ; volatile compounds ; sensory analysis ; chemometrics ; anti food fraud ; Curcuma longa ; DNA markers ; SYBR-GREEN real-time PCR ; Zea mays ; pasta ; Triticum aestivum ; Triticum durum ; genetic traceability ; digital PCR ; semolina ; species ; truffle ; Tuber spp. ; species differentiation ; near-infrared spectroscopy ; red deer ; roe deer ; water deer ; multiplex PCR ; capillary electrophoresis ; perilla ; sesame ; geographic origin ; metabolomics ; multivariate analysis ; metabolite profiling ; quantification ; chicken ; guinea fowl ; pheasant ; quail ; turkey ; authentication ; authenticity ; chemometric ; fish ; origin ; meat ; milk ; spectroscopy ; 1H-NMR ; GC-MS ; HPLC-UV/VIS ; protein hydrolysate ; free amino acid contents ; ProHydrAdd ; monofloral honey ; direct analysis in real time (DART) ; high resolution mass spectrometry (HRMS) ; geographical origin ; Ginkgo biloba ; plant infusions ; real-time polymerase chain reaction ; DNA extraction ; opium poppy ; seed ; pollen grains ; bakery product ; oil ; PCR ; Salmo salar L. ; fatty acids ; mislabeling ; machine learning ; n/a ; bic Book Industry Communication::T Technology, engineering, agriculture::TB Technology: general issues
    Language: English
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    MDPI - Multidisciplinary Digital Publishing Institute
    Publication Date: 2024-04-11
    Description: This book focuses on the fundamental and applied research of the non-destructive estimation and diagnosis of crop leaf and plant nitrogen status and in-season nitrogen management strategies based on leaf sensors, proximal canopy sensors, unmanned aerial vehicle remote sensing, manned aerial remote sensing and satellite remote sensing technologies. Statistical and machine learning methods are used to predict plant-nitrogen-related parameters with sensor data or sensor data together with soil, landscape, weather and/or management information. Different sensing technologies or different modelling approaches are compared and evaluated. Strategies are developed to use crop sensing data for in-season nitrogen recommendations to improve nitrogen use efficiency and protect the environment.
    Keywords: UAS ; multiple sensors ; vegetation index ; leaf nitrogen accumulation ; plant nitrogen accumulation ; pasture quality ; airborne hyperspectral imaging ; random forest regression ; sun-induced chlorophyll fluorescence (SIF) ; SIF yield indices ; upward ; downward ; leaf nitrogen concentration (LNC) ; wheat (Triticum aestivum L.) ; laser-induced fluorescence ; leaf nitrogen concentration ; back-propagation neural network ; principal component analysis ; fluorescence characteristics ; canopy nitrogen density ; radiative transfer model ; hyperspectral ; winter wheat ; flooded rice ; pig slurry ; aerial remote sensing ; vegetation indices ; N recommendation approach ; Mediterranean conditions ; nitrogen ; vertical distribution ; plant geometry ; remote sensing ; maize ; UAV ; multispectral imagery ; LNC ; non-parametric regression ; red-edge ; NDRE ; dynamic change model ; sigmoid curve ; grain yield prediction ; leaf chlorophyll content ; red-edge reflectance ; spectral index ; precision N fertilization ; chlorophyll meter ; NDVI ; NNI ; canopy reflectance sensing ; N mineralization ; farmyard manures ; Triticum aestivum ; discrete wavelet transform ; partial least squares ; hyper-spectra ; rice ; nitrogen management ; reflectance index ; multiple variable linear regression ; Lasso model ; Multiplex®3 sensor ; nitrogen balance index ; nitrogen nutrition index ; nitrogen status diagnosis ; precision nitrogen management ; terrestrial laser scanning ; spectrometer ; plant height ; biomass ; nitrogen concentration ; precision agriculture ; unmanned aerial vehicle (UAV) ; digital camera ; leaf chlorophyll concentration ; portable chlorophyll meter ; crop ; PROSPECT-D ; sensitivity analysis ; UAV multispectral imagery ; spectral vegetation indices ; machine learning ; plant nutrition ; canopy spectrum ; non-destructive nitrogen status diagnosis ; drone ; multispectral camera ; SPAD ; smartphone photography ; fixed-wing UAV remote sensing ; random forest ; canopy reflectance ; crop N status ; Capsicum annuum ; proximal optical sensors ; Dualex sensor ; leaf position ; proximal sensing ; cross-validation ; feature selection ; hyperparameter tuning ; image processing ; image segmentation ; nitrogen fertilizer recommendation ; supervised regression ; RapidSCAN sensor ; nitrogen recommendation algorithm ; in-season nitrogen management ; nitrogen use efficiency ; yield potential ; yield responsiveness ; standard normal variate (SNV) ; continuous wavelet transform (CWT) ; wavelet features optimization ; competitive adaptive reweighted sampling (CARS) ; partial least square (PLS) ; grapevine ; hyperparameter optimization ; multispectral imaging ; precision viticulture ; RGB ; multispectral ; coverage adjusted spectral index ; vegetation coverage ; random frog algorithm ; active canopy sensing ; integrated sensing system ; discrete NIR spectral band data ; soil total nitrogen concentration ; moisture absorption correction index ; particle size correction index ; coupled elimination ; thema EDItEUR::T Technology, Engineering, Agriculture, Industrial processes::TB Technology: general issues ; thema EDItEUR::T Technology, Engineering, Agriculture, Industrial processes::TB Technology: general issues::TBX History of engineering and technology ; thema EDItEUR::T Technology, Engineering, Agriculture, Industrial processes::TQ Environmental science, engineering and technology
    Language: English
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    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Publication Date: 2022-10-31
    Description: Dataset: TONGA 2019 NO3 d15N
    Description: Here we present nitrate plus nitrite isotopic data from the TONGA 2019 research cruise to the Western Tropical South Pacific. These data were collected along a transect focusing on the impacts on biological productivity and the biological carbon pump from shallow hydrothermal sources of trace elements. Notably, these data show that the subsurface nitrate plus nitrite isotopes were low, 2 to 3 per mil, in the vicinity of the hydrothermal vents. Subsurface nitrate plus nitrite isotopes were higher, 4 to 7 per mil, at stations further from the vents. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/869963
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1829797
    Keywords: Nitrate d15N ; D15N budget ; Nitrogen fixation ; Western Tropical South Pacific
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
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  • 9
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    MDPI - Multidisciplinary Digital Publishing Institute
    Publication Date: 2024-04-05
    Description: Allohexaploid bread wheat and diploid barley are two of the most cultivated crops in the world. This book reports novel research and reviews concerning the use of modern technologies to understand the molecular bases for wheat and barley improvement. The contributions published in this book illustrate research advances in wheat and barley knowledge using modern molecular techniques. These molecular approaches cover genomic, transcriptomic, proteomic, and phenomic levels, together with new tools for gene identification and the development of novel molecular markers. Overall, the contributions for this book lead to a further understanding of regulatory systems in order to improve wheat and barley performance.
    Keywords: QH301-705.5 ; Q1-390 ; n/a ; biotechnology ; transgene ; Aegilops tauschii ; antioxidant enzymes ; aquaporin ; molecular marker ; Kompetitive Allele Specific PCR (KASP) ; transgenic wheat ; purple acid phosphatase phytase ; genome editing ; genes ; resistance ; genome assembly ; germination ; protein two-dimensional electrophoresis ; 1 ; disease resistance ; Thinopyrum ; plant ; oligo probe ; optical mapping ; genetic biofortification ; breeding ; population structure ; marker-assisted selection ; crops ; hybrid necrosis ; PAPhy ; Triticeae ; wheat ; Barley ; genome stability ; CRISPR ; powdery mildew ; RNA editing ; bread wheat ; allohexaploid ; nucleus ; chromatin ; introgression ; favorable alleles ; genetic engineering ; Tunisian landraces ; barely ; Pm40 ; Blumeria graminis f. sp. tritici ; Transcriptional dynamics ; Lr42 ; Triticum durum ; histochemical analysis ; molecular mapping ; ribosomal DNA ; 12-oxophytodienoate reductase ; small segment translocation ; HIGS ; Powdery mildew ; abiotic stress ; phytase ; RNA-seq ; Bulked segregant analysis-RNA-Seq (BSR-Seq) ; grain ; DArTseq technology ; center of diversity ; mature grain phytase activity (MGPA) ; cereals ; Grain development ; hybrid ; homoeolog ; 3D-FISH ; jasmonates ; Single nucleotide polymorphism (SNP) ; genetic diversity ; ND-FISH ; durum wheat ; protease ; transpiration ; TdPIP2 ; cereal cyst nematodes ; mass spectrometry ; 6R ; Landrace ; marker-trait associations ; BAC ; chromosome ; barley ; freezing tolerance ; KASP markers ; Triticum aestivum ; rye ; thema EDItEUR::P Mathematics and Science::PS Biology, life sciences
    Language: English
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  • 10
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    Freshwater Biological Association | Windermere, UK
    In:  http://aquaticcommons.org/id/eprint/4848 | 1256 | 2011-09-29 15:49:18 | 4848 | Freshwater Biological Association
    Publication Date: 2021-07-06
    Description: When dissolved in water, compounds of nitrogen and phosphorus ought to contain the basic assimilated food requirements for autotrophic plants and therefore autotrophic algae. This article summarises the occurrence of nitrogen in water, how species of algae utilize nitrogen and phosphorus forms for growth and the capacities of algae to adapt to environments of different nutrient wealth. This topic has unquestionable importance not only for the purpose of survival of a species but also in deciding indirectly about the stability of ecosystems.
    Description: Translated from Polish into English
    Keywords: Biology ; Chemistry ; Limnology ; Algae ; Nitrogen fixation ; Nitrogen ; Phosphorus ; Nutritional requirements ; Bacteria ; Organic compounds
    Repository Name: AquaDocs
    Type: monograph
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  • 11
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Inomura, K., Deutsch, C., Wilson, S. T., Masuda, T., Lawrenz, E., Lenka, B., Sobotka, R., Gauglitz, J. M., Saito, M. A., Prášil, O., & Follows, M. J. Quantifying oxygen management and temperature and light dependencies of nitrogen fixation by Crocosphaera watsonii. Msphere, 4(6), (2019): e00531-19, doi: 10.1128/msphere.00531-19.
    Description: Crocosphaera is a major dinitrogen (N2)-fixing microorganism, providing bioavailable nitrogen (N) to marine ecosystems. The N2-fixing enzyme nitrogenase is deactivated by oxygen (O2), which is abundant in marine environments. Using a cellular scale model of Crocosphaera sp. and laboratory data, we quantify the role of three O2 management strategies by Crocosphaera sp.: size adjustment, reduced O2 diffusivity, and respiratory protection. Our model predicts that Crocosphaera cells increase their size under high O2. Using transmission electron microscopy, we show that starch granules and thylakoid membranes are located near the cytoplasmic membranes, forming a barrier for O2. The model indicates a critical role for respiration in protecting the rate of N2 fixation. Moreover, the rise in respiration rates and the decline in ambient O2 with temperature strengthen this mechanism in warmer water, providing a physiological rationale for the observed niche of Crocosphaera at temperatures exceeding 20°C. Our new measurements of the sensitivity to light intensity show that the rate of N2 fixation reaches saturation at a lower light intensity (∼100 μmol m−2 s−1) than photosynthesis and that both are similarly inhibited by light intensities of 〉500 μmol m−2 s−1. This suggests an explanation for the maximum population of Crocosphaera occurring slightly below the ocean surface.
    Description: We thank Stephanie Dutkiewicz and Sallie W. Chisholm for useful discussion, Martin Lukeš for technical assistance for the N2 fixation measurement, and the members of Writing and Communication Center at MIT for their advice on writing. This research was supported by the Japan Student Service Organization (JASSO) (grant L11171020001 to K.I.), the Gordon and Betty Moore Foundation (grant GBMF 3775 to C.D. and grant GBMF 3778 to M.J.F.), the U.S. National Science Foundation (grant OCE-1756524 to S.T.W., grant OCE-1558702 to M.J.F., and grant OCE-PRF 1421196 to J.M.G), the Simons Foundation (Simons Postdoctoral Fellowship in Marine Microbial Ecology award 544338 to K.I., Simons Collaboration on Ocean Processes and Ecology award 329108 to M.J.F., Simons Collaboration on Computational BIOgeochemical Modeling of Marine EcosystemS [CBIOMES] award 549931 to M.J.F.), the Czech Science Foundation (GAČR) (grant 16-15467S to O.P.), and the National Sustainability Programme (NPU) (grant LO1416 Algatech plus to O.P.).
    Keywords: Crocosphaera ; Carbon ; Cell flux model ; Daily cycle ; Iron ; Light ; Nitrogen ; Nitrogen fixation ; Oxygen ; Photosynthesis ; Temperature
    Repository Name: Woods Hole Open Access Server
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  • 12
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    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Publication Date: 2022-10-31
    Description: Dataset: Nitrogen and carbon fixation rates - Trichodesmium
    Description: Nitrogen and carbon fixation rates from Trichodesmium colonies from RV/Atlantic cruise AT39-05, Feb-Mar 2018. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/766354
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1657757
    Keywords: Trichodesmium ; Nitrogen fixation ; Carbon fixation ; Atlantic
    Repository Name: Woods Hole Open Access Server
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    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Publication Date: 2022-10-31
    Description: Dataset: Nitrogen and carbon fixation rates - bulk seawater
    Description: Nitrogen and carbon fixation rates from bulk water samples from RV/Atlantic cruise AT39-05, Feb-Mar 2018. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/766334
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1657757
    Keywords: Bulk seawater ; Nitrogen fixation ; Carbon fixation ; Atlantic
    Repository Name: Woods Hole Open Access Server
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  • 14
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Selden, C. R., Mulholland, M. R., Bernhardt, P. W., Widner, B., Macias-Tapia, A., Ji, Q., & Jayakumar, A. Dinitrogen fixation across physico-chemical gradients of the Eastern Tropical North Pacific oxygen deficient zone. Global Biogeochemical Cycles, 33, (2019): 1187-1202, doi:10.1029/2019GB006242.
    Description: The Eastern Tropical North Pacific Ocean hosts one of the world's largest oceanic oxygen deficient zones (ODZs). Hot spots for reactive nitrogen (Nr) removal processes, ODZs generate conditions proposed to promote Nr inputs via dinitrogen (N2) fixation. In this study, we quantified N2 fixation rates by 15N tracer bioassay across oxygen, nutrient, and light gradients within and adjacent to the ODZ. Within subeuphotic oxygen‐deplete waters, N2 fixation was largely undetectable; however, addition of dissolved organic carbon stimulated N2 fixation in suboxic (〈20 μmol/kg O2) waters, suggesting that diazotroph communities are likely energy limited or carbon limited and able to fix N2 despite high ambient concentrations of dissolved inorganic nitrogen. Elevated rates (〉9 nmol N·L−1·day−1) were also observed in suboxic waters near volcanic islands where N2 fixation was quantifiable to 3,000 m. Within the overlying euphotic waters, N2 fixation rates were highest near the continent, exceeding 500 μmol N·m−2·day−1 at one third of inshore stations. These findings support the expansion of the known range of diazotrophs to deep, cold, and dissolved inorganic nitrogen‐replete waters. Additionally, this work bolsters calls for the reconsideration of ocean margins as important sources of Nr. Despite high rates at some inshore stations, regional N2 fixation appears insufficient to compensate for Nr loss locally as observed previously in the Eastern Tropical South Pacific ODZ.
    Description: We gratefully acknowledge the efforts of the captain and crew of the NOAA vessel Ronald H. Brown and the scientists who participated in the collection and analysis of the data presented here, particularly Shannon Cofield, Wei Yan, Nicole Travis, and Matt Forbes. We thank the Monterey Bay Aquatic Research Institute for the use of their pump profiling system and Margeurite Blum for her expertise in its use. Finally, we thank Bess Ward for the use of her facilities at Princeton University. This work was supported by the National Science Foundation Division of Ocean Sciences (NSF‐OCE) Grant OCE‐1356056 to M. R. M. and A. J. Data will be made available at the website (https://www.bco‐dmo.org/project/472492). The authors declare no conflicts of interest.
    Keywords: Nitrogen fixation ; Oxygen deficient zone ; Eastern tropical pacific ; Diazotroph ; Oxygen minimum zone ; Aphotic
    Repository Name: Woods Hole Open Access Server
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    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Publication Date: 2022-10-31
    Description: Dataset: Trichodesmium AHL metatranscriptomes_AE1409
    Description: Trichodesmium is a marine, diazotrophic cyanobacterium that plays a central role in the biogeochemical cycling of carbon and nitrogen. Colonies ubiquitously co-occur with a diverse microbiome of heterotrophic bacteria. Here we show that manipulation of the microbiome with quorum sensing acyl homoserine lactone (AHL) molecules significantly modulated rates of N2 fixation by Trichodesmium collected from the western North Atlantic, with both positive and negative effects of varied magnitude. Changes in Trichodesmium N2 fixation did not clearly correlate with changes in microbiome composition or geochemical patterns. Metatranscriptome sequencing revealed significant changes in the relative abundance of microbiome transcripts encoding metabolic functions consistent with quorum sensing responses in model bacteria. There was little overlap in specific microbiome transcriptional responses to AHL addition between stations, and this variability in microbiome gene expression may underpin the heterogeneous changes in Trichodesmium N2 fixation. These data suggest the microbiome could play a large and previously overlooked role in modulating Trichodesmium N2 fixation. This metadata form describes the metatranscriptomic sequencing reads that were used in the study. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/746654
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1332898, NSF Division of Ocean Sciences (NSF OCE) OCE-1332912
    Keywords: Trichodesmium ; Metatranscriptome ; Quorum sensing ; Nitrogen fixation
    Repository Name: Woods Hole Open Access Server
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    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Publication Date: 2022-10-31
    Description: Dataset: VAHINE nitrogen
    Description: This dataset includes water column dissolved organic nitrogen (DON) concentration and d15N data, as well as sinking particulate nitrogen d15N (“PNsink d15N”) data. These samples were collected inside triplicate (“M1”, “M2”, and “M3”) large volume (i.e., 2.3 m diameter, 15 m deep) mesocosm experiments deployed in a lagoon off of Noumea, New Caledonia. DON samples were collected at 6 m depth daily by a Teflon pump and PVC tubing. PNsink d15N samples were collected daily by SCUBA divers who removed a screw-top plastic bottle from the bottom of the plastic mesocosm. “Swimmers” were removed from the PNsink d15N samples prior to analysis. These measurements were made as part of project "VAriability of vertical and tropHIc transfer of diazotroph derived N in the south wEst Pacific" (VAHINE) to study the fate of fixed nitrogen in the oceanic pelagic food web and its potential impact on carbon export. The field campaign of VAHINE took place in the South West Pacific (New Caledonia) in January and February of 2013 and involved 16 scientists from France, Israel, Germany and the USA. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/739646
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1537314
    Keywords: Nitrogen ; Stable nitrogen isotopes ; Nitrogen fixation ; D15N budget ; Diazotrophs ; Sinking flux
    Repository Name: Woods Hole Open Access Server
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  • 17
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Mulholland, M. R., Bernhardt, P. W., Widner, B. N., Selden, C. R., Chappell, P. D., Clayton, S., Mannino, A., & Hyde, K. High rates of N-2 fixation in temperate, western North Atlantic coastal waters expand the realm of marine diazotrophy. Global Biogeochemical Cycles, 33(7), (2019): 826-840, doi:10.1029/2018GB006130.
    Description: Dinitrogen (N2) fixation can alleviate N limitation of primary productivity by introducing fixed nitrogen (N) to the world's oceans. Although measurements of pelagic marine N2 fixation are predominantly from oligotrophic oceanic regions, where N limitation is thought to favor growth of diazotrophic microbes, here we report high rates of N2 fixation from seven cruises spanning four seasons in temperate, western North Atlantic coastal waters along the North American continental shelf between Cape Hatteras and Nova Scotia, an area representing 6.4% of the North Atlantic continental shelf area. Integrating average areal rates of N2 fixation during each season and for each domain in the study area, the estimated N input from N2 fixation to this temperate shelf system is 0.02 Tmol N/year, an amount equivalent to that previously estimated for the entire North Atlantic continental shelf. Unicellular group A cyanobacteria (UCYN‐A) were most often the dominant diazotrophic group expressing nifH, a gene encoding the nitrogenase enzyme, throughout the study area during all seasons. This expands the domain of these diazotrophs to include coastal waters where dissolved N concentrations are not always depleted. Further, the high rates of N2 fixation and diazotroph diversity along the western North Atlantic continental shelf underscore the need to reexamine the biogeography and the activity of diazotrophs along continental margins. Accounting for this substantial but previously overlooked source of new N to marine systems necessitates revisions to global marine N budgets.
    Description: Data presented in the body and supporting information of this manuscript have been deposited in the National Aeronautics and Space Administration (NASA) repository, SeaBASS and is publicly available at the following DOI address: 10.5067/SeaBASS/CLIVEC/DATA 001. This work was supported by a grant from NASA Grant Number: NNX09AE45G to M. R. M., A. M., and K. H.; a grant from NSF to P. D. C; and the Jacques S. Zaneveld and Neil and Susan Kelley Endowed Scholarships to C. S. We thank NOAA for ship time and the captain and crew of NOAA vessels Delaware II and Henry Bigelow for assistance during field sampling. Data have been submitted to SeaBASS (https://seabass.gsfc.nasa.gov/), NASA's preferred archival repository.
    Keywords: Nitrogen fixation ; Diazotrophy ; North American continental shelf
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 18
    Publication Date: 2022-10-31
    Description: Dataset: OUTPACE - water column nitrate+nitrite
    Description: Constraining the rates and spatial distribution of di-nitrogen (N2) fixation fluxes to the ocean informs our understanding of the environmental sensitivities of N2 fixation as well as the timescale over which the fluxes of nitrogen (N) to and from the ocean may respond to each other. Here we quantify rates of N2 fixation as well as its contribution to export production along a zonal transect in the Western Tropical South Pacific (WTSP) Ocean using N isotope (“d15N”) budgets. Comparing measurements of water column nitrate+nitrite d15N with the d15N of sinking particulate N at a western, central, and eastern station, these d15N budgets indicate high, modest, and low rates of N2 fixation at the respective stations. The results also imply that N2 fixation supports exceptionally high, i.e., >50%, of export production at the western and central stations, which are also proximal to the largest iron sources. These geochemically-based rates of N2 fixation are equal to or greater than those previously reported in the tropical North Atlantic, indicating that the WTSP Ocean has the capacity to support globally significant rates of N2 fixation, which may compensate for N removal in the oxygen deficient zones of the eastern tropical Pacific. For a complete list of measurements, refer to the supplemental document 'Field_names.pdf', and a full dataset description is included in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: http://www.bco-dmo.org/dataset/733237
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1537314
    Keywords: Nitrogen ; Nitrate d15N ; D15N budget ; Southwest Pacific ; Nitrogen fixation
    Repository Name: Woods Hole Open Access Server
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  • 19
    Publication Date: 2021-05-19
    Description: Oceans act as a major sink for anthropogenic CO2 through primary production. The Arabian Sea (area ~6.2 × 106 km2) covers only about 1% of the global ocean surface but contributes up to 5% of the global marine primary production, partly due to high influx of ‘new’ nitrogen via diazotrophic N2 fixation. Iron, whose main source in the ocean is atmospheric transport of dust, is an essential nutrient for sustaining N2 fixation. Despite being in the vicinity of the Thar desert on the east and the Arabia desert on the west, the Arabian Sea has been projected to be an HNLC (high nutrient low chlorophyll) region
    Description: Unpublished
    Keywords: IIOE-2 ; CO2 ; Primary production ; Sagar Sampada/FORV ; Nitrogen fixation
    Repository Name: AquaDocs
    Type: Report , Not Known
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  • 20
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    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Publication Date: 2022-10-31
    Description: Dataset: Arctic Nitrogen Fixation Rates
    Description: This dataset provides rates of nitrogen fixation for the coastal Chukchi Sea near Barrow, Alaska. Nitrogen fixation supplies ‘new’ nitrogen to the global ocean and supports primary production and impacts global biogeochemical cycles. Historically, nitrogen fixation in marine waters was considered a predominantly warm water process but this and other recent studies have shown that nitrogen fixation is occurring at low rates in polar waters. This dataset reports rates of 3.5 – 17.2 nmol N L-1 d-1 in the ice-free coastal Alaskan Arctic. Additional investigations of high-latitude marine diazotrophic physiology are required to refine these N2 fixation estimates. For a complete list of measurements, refer to the supplemental document 'Field_names.pdf', and a full dataset description is included in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: http://www.bco-dmo.org/dataset/701789
    Description: NSF Arctic Sciences (NSF ARC) PLR-0909839
    Keywords: Nitrogen fixation ; Temperature ; Arctic Ocean ; Nitrogen ; Nutrients ; Chukchi Sea
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  • 21
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    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Publication Date: 2022-05-25
    Description: 15N2 incubation-based N2 fixation rates, nitrate plus nitrite concentration and d15N, sediment trap PN mass flux and isotopic composition from the Eastern Tropical South Pacific, 2010 and 2011
    Description: An extensive region of the Eastern Tropical South Pacific (ETSP) Ocean has surface waters that are nitrate-poor yet phosphate-rich. It has been proposed that this distribution of surface nutrients provides a geochemical niche favorable for N2 fixation, the primary source of nitrogen to the ocean. Here, we present results from two cruises to the ETSP where rates of N2 fixation and its contribution to export production were determined with a suite of geochemical and biological measurements. N2 fixation was only detectable using nitrogen isotopic mass balances at two of six stations, and rates ranged from 0 to 23 µmol N m-2 d-1 based on sediment trap fluxes. Whereas the fractional importance of N2 fixation did not change, the N2-fixation rates at these two stations were several-fold higher when scaled to other productivity metrics. Regardless of the choice of productivity metric these N2-fixation rates are low compared with other oligotrophic locations, and the nitrogen isotope budgets indicate that N2 fixation supports no more than 20% of export production regionally. Although euphotic zone-integrated short-term N2-fixation rates were higher, up to 100 µmol N m-2 d-1, and detected N2 fixation at all six stations, studies of nitrogenase gene abundance and expression from the same cruises align with the geochemical data and together indicate that N2 fixation is a minor source of new nitrogen to surface waters of the ETSP. This finding is consistent with the hypothesis that, despite a relative abundance of phosphate, iron may limit N2 fixation in the ETSP.
    Description: NSF-OCE-0850801, NSF-OCE-0850905, NSF-OCE-0961098
    Description: 2016-04-15
    Keywords: Sediment trap ; Nitrogen fixation ; Eastern Tropical South Pacific ; Delta 15N ; PN, particulate nitrogen
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
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  • 22
    Publication Date: 2022-05-25
    Description: © The Author(s), 2015. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Deep Sea Research Part I: Oceanographic Research Papers 104 (2015): 72-91, doi:10.1016/j.dsr.2015.06.012.
    Description: Nitrogen fixation is an important yet still incompletely constrained component of the marine nitrogen cycle, particularly in the subsurface. A Video Plankton Recorder (VPR) survey in the subtropical North Atlantic found higher than expected Trichodesmium colony abundances at depth, leading to the hypothesis that deep nitrogen fixation in the North Atlantic may have been previously underestimated. Here, Trichodesmium colony abundances and modeled nitrogen fixation from VPR transects completed on two cruises in the tropical and subtropical North Atlantic in fall 2010 and spring 2011 were used to evaluate that hypothesis. A bio-optical model was developed based on carbon-normalized nitrogen fixation rates measured on those cruises. Estimates of colony abundance and nitrogen fixation were similar in magnitude and vertical and geographical distribution to conventional estimates in a recently compiled climatology. Thus, in the mean, VPR-based estimates of volume-specific nitrogen fixation rates at depth in the tropical North Atlantic were not inconsistent with estimates derived from conventional sampling methods. Based on this analysis, if Trichodesmium nitrogen fixation by colonies is underestimated, it is unlikely that it is due to underestimation of deep abundances by conventional sampling methods.
    Description: We gratefully acknowledge support of this research by NSF and NASA. A NASA Earth and Space Science Fellowship supported E. Olson's graduate studies.
    Keywords: Nitrogen fixation ; Trichodesmium spp. ; North Atlantic ; Video Plankton Recorder
    Repository Name: Woods Hole Open Access Server
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  • 23
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2014. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Global Biogeochemical Cycles 28 (2014): 103-114, doi:10.1002/2013GB004652.
    Description: A new observational synthesis of diazotrophic biomass and nitrogen fixation provides the opportunity for systematic quantitative evaluation of these aspects in biogeochemical models. One such model of the Atlantic Ocean is scrutinized, and the simulated biomass is found to be an order of magnitude too low. Initial attempts to increase biomass levels through decreasing grazing and other loss terms caused an unrealistic buildup of nitrate in the upper ocean. Two key changes to the model structure facilitated a closer match to the observed biomass and nitrogen fixation rates: addition of a pathway for export of diazotrophically fixed organic material and uptake of inorganic nitrogen by the diazotroph population. These changes, along with a few other revisions to existing model parameterizations, facilitate more accurate simulation of basin-scale distributions of diazotrophic biomass, as well as mesoscale variations contained therein. The resulting solutions suggest that the Trichodesmium spp. populations of the North Atlantic export the vast majority of the nitrogen they fix, a finding that awaits assessment through direct observation.
    Description: Support of this research by the National Science Foundation and the National Aeronautics and Space Administration is gratefully acknowledged.
    Description: 2014-08-20
    Keywords: Trichodesmium ; Nitrogen fixation ; North Atlantic ; Eddies ; Modeling ; Export
    Repository Name: Woods Hole Open Access Server
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  • 24
    Publication Date: 2022-05-26
    Description: © The Author(s), 2014. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Frontiers in Microbiology 5 (2014): 359, doi:10.3389/fmicb.2014.00359.
    Description: Cyanobacteria thrive in every illuminated aquatic environment known, contributing at least 25% of primary productivity worldwide. Given their importance in carbon and nutrient cycles, cyanobacteria are essential geochemical agents that have shaped the composition of the Earth's crust, oceans and atmosphere for billions of years. The high diversity of cyanobacteria is reflected in the panoply of unique physiological adaptations across the phylum, including different strategies to optimize light harvesting or sustain nitrogen fixation, but also different lifestyles like psychrotrophy, and oligotrophy. Some cyanobacteria produce secondary metabolites of cryptic function, many of which are toxic to eukaryotes. Consequently, bloom-forming toxic cyanobacteria are global hazards that are of increasing concern in surface waters affected by anthropogenic nutrient loads and climate change.
    Keywords: Cyanobacteria ; HABs ; Prochlorococcus ; Synechococcus ; Nitrogen fixation
    Repository Name: Woods Hole Open Access Server
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  • 25
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    Massachusetts Institute of Technology and Woods Hole Oceanographic Institution
    Publication Date: 2022-05-25
    Description: Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution February 2013
    Description: The stable isotopes, δ15N and δ18O, of nitrite and nitrate can be powerful tools used to interpret nitrogen cycling in the ocean. In order to interpret isotope profiles, the isotope systematics of each process involved must be known. This thesis describes numerous experiments using both cultures of nitrifying organisms as well as natural seawater samples to determine the oxygen isotope systematics of nitrification. These experiments show that the accumulation of nitrite has a large effect on the resulting δ18ONO3. Also, the δ18ONO2 was developed as a unique tracer because it undergoes abiotic equilibration with water δ18O at a predictable rate based on pH, temperature and salinity. This rate, its dependencies, and how the δ18ONO2 values can be used as not only biological source indicators but also indicators of age are described. Finally, using the isotope systematics of nitrification as well as the properties of nitrite oxygen isotope exchange described in this thesis, the final chapter interprets multi-isotope nitrate and nitrite profiles in the Costa Rica Upwelling Dome using a simple 1D model. Overall, this thesis describes new nitrogen and oxygen isotopic tracers and uses them to elucidate the complicated nitrogen biogeochemistry in oxygen deficient zones.
    Description: The work described in this thesis was funded by the National Science Foundation grants OCE 05-26277 and OCE 09-610998 to KLC, the MIT Presidential Fellowship, the WHOI Coastal Ocean Institute, the WHOI Academic Programs Office, and the MIT Houghton fund.
    Keywords: Nitrification ; Nitrogen fixation ; Melville (Ship) Cruise MV1008 ; Melville (Ship) Cruise MV1104 ; Roger Revelle (Ship) Cruise
    Repository Name: Woods Hole Open Access Server
    Type: Thesis
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  • 26
    Publication Date: 2022-05-25
    Description: © The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Ecosystems 16 (2013): 1550-1564, doi:10.1007/s10021-013-9701-0.
    Description: We examined controls of benthic dinitrogen (N2) fixation and primary production in oligotrophic lakes in Arctic Alaska, Toolik Field Station (Arctic Long-Term Ecological Research Site). Primary production in many oligotrophic lakes is limited by nitrogen (N), and benthic processes are important for whole-lake function. Oligotrophic lakes are increasingly susceptible to low-level, non-point source nutrient inputs, yet the effects on benthic processes are not well understood. This study examines the results from a whole-lake fertilization experiment in which N and P were added at a relatively low level (4 times natural loading) in Redfield ratio to a shallow (3 m) and a deep (20 m) oligotrophic lake. The two lakes showed similar responses to fertilization: benthic primary production and respiration (each 50–150 mg C m−2 day−1) remained the same, and benthic N2 fixation declined by a factor of three- to fourfold by the second year of treatment (from ~0.35 to 0.1 mg N m−2 day−1). This showed that the response of benthic N2 fixation was de-coupled from the nutrient limitation status of benthic primary producers and raised questions about the mechanisms, which were examined in separate laboratory experiments. Bioassay experiments in intact cores also showed no response of benthic primary production to added N and P, but contrasted with the whole-lake experiment in that N2 fixation did not respond to added N, either alone or in conjunction with P. This inconsistency was likely a result of nitrogenase activity of existing N2 fixers during the relative short duration (9 days) of the bioassay experiment. N2 fixation showed a positive saturating response when light was increased in the laboratory, but was not statistically related to ambient light level in the field, leading us to conclude that light limitation of the benthos from increasing water-column production was not important. Thus, increased N availability in the sediments through direct uptake likely caused a reduction in N2 fixation. These results show the capacity of the benthos in oligotrophic systems to buffer the whole-system response to nutrient addition by the apparent ability for significant nutrient uptake and the rapid decline in N2 fixation in response to added nutrients. Reduced benthic N2 fixation may be an early indicator of a eutrophication response of lakes which precedes the transition from benthic to water-column-dominated systems.
    Description: This project was supported by NSF-OPP 9732281, NSF-DEB 9810222, NSF-DEB 0423385, and by a Doctoral Dissertation Improvement Grant NSF-DEB 0206173. Additional funding was provided by the Small Grants Program through the NSF-IGERT Program in Biogeochemistry and Environmental Change at Cornell University.
    Keywords: Benthic ; Nitrogen fixation ; Primary production ; Oligotrophic ; Arctic ; Toolik
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  • 27
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2011. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 38 (2011): L16608, doi:10.1029/2011GL048315.
    Description: Dinitrogen (N2) fixation is recognized as an important input of new nitrogen (N) to the open ocean gyres, contributing to the export of organic matter from surface waters. However, very little N2-fixation research has focused on the South Atlantic Gyre, where dust deposition of iron (Fe), an important micronutrient for diazotrophs, is seasonally low. Recent modeling efforts suggest that N2-fixation may in fact be closely coupled to, and greatest in, areas of denitrification, as opposed to the oceanic gyres. One of these areas, the Benguela Upwelling System, lies to the east of the South Atlantic Gyre. In this study we show that N2-fixation in surface waters across the South Atlantic Gyre was low overall (〈1.5 nmol N l−1 d−1) with highest rates seen in or near the Benguela Upwelling System (up to ∼8 nmol N l−1 d−1). Surface water dissolved Fe (dFe) concentrations were very low in the gyre (∼0.3 nM or lower), while soluble reactive phosphorus (SRP) concentrations were relatively high (∼0.15 μM). N2-fixation rates across the entire sampling area were significantly positively correlated to dFe, but also to SRP and NO3−. Thus, high NO3− concentrations did not exclude N2-fixation in the upwelling region, which provides evidence that N2-fixation may be occurring in previously unrecognized waters, specifically near denitrification zones. However the gene encoding for a nitrogenase component (nifH) was not detected from known diazotrophs at some stations in or near the upwelling where N2-fixation was greatest, suggesting the presence of unknown diazotrophs in these waters.
    Description: Funding for this research was provided by NSF grants OCE‐0452883 (to E.A.W. and M.A.S.), OCE‐0825922 (to E.A.W.), and The Gordon and Betty Moore Foundation (JPZ).
    Keywords: Diazotrophs ; Nitrogen fixation
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  • 28
    Publication Date: 2022-05-26
    Description: Author Posting. © Inter-Research, 2006. This article is posted here by permission of Inter-Research for personal use, not for redistribution. The definitive version was published in Marine Ecology Progress Series 309 (2006): 25-39, doi:10.3354/meps309025.
    Description: Heterocystous, planktonic cyanobacteria capable of fixing atmospheric N2 into available nitrogen (N) are common and critically important to nutrient cycling in many lakes, yet they are rarely observed in estuaries at salinities 〉10 ppt, even when strongly N limited. In a series of mesocosm experiments using water from Narragansett Bay (Rhode Island), we manipulated top-down (grazing) and bottom-up (nutrient) factors hypothesized to exclude heterocystous cyanobacteria from estuaries. We previously reported that planktonic, heterocystous cyanobacteria grew and fixed N in the absence of grazers. Here, we focus on responses to phosphorus (P) additions and grazer manipulations. Zooplankton (Acartia sp.) populations typical of temperate zone estuaries suppressed cyanobacteria, and their influence was direct through grazing rather than indirect on nutrient stoichiometry. Cyanobacterial abundance and heterocysts were low in treatments with no external P inputs. Concentrations of dissolved inorganic P comparable to those in Narragansett Bay were obtained only in P-fertilized mesocosms. Unlike previous estuarine mesocosm experiments with P fertilization, planktonic cyanobacteria grew and fixed N in our experimental systems. However, mean cell and heterocyst abundances under the most favorable conditions (high P, low N:P, and low grazers) were much lower than in comparable freshwater experiments, with N limitation maintained. These results support the hypothesis that intrinsic growth of heterocystous cyanobacteria in saline estuaries is slower than in freshwater, and that slower growth is unlikely to be due to systematic differences in P availability. Slow growth, combined with grazing, can severely limit development of planktonic, N-fixing cyanobacterial blooms in estuaries.
    Description: This research was supported by grants from the National Science Foundation (NSF) and by an endowment given to Cornell University by David R. Atkinson. Fellowship support to F.C. was provided by NSF-sponsored graduate training grants.
    Keywords: Nitrogen fixation ; Heterocystous cyanobacteria ; Estuaries ; Nitrogen limitation ; Nitrogen and phosphorus stoichiometry ; Zooplankton grazing ; Mesocosms
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  • 29
    Publication Date: 2024-01-12
    Description: The Mycosphaerella complex is both poly- and paraphyletic, containing several different families and genera. The genus Mycosphaerella is restricted to species with Ramularia anamorphs, while Septoria is restricted to taxa that cluster with the type species of Septoria, S. cytisi, being closely related to Cercospora in the Mycosphaerellaceae.\nSpecies that occur on graminicolous hosts represent an as yet undescribed genus, for which the name Zymoseptoria is proposed. Based on the 28S nrDNA phylogeny derived in this study, Zymoseptoria is shown to cluster apart from Septoria. Morphologically species of Zymoseptoria can also be distinguished by their yeast-like growth in culture, and the formation of different conidial types that are absent in Septoria s.str. Other than the wellknown pathogens such as Z. tritici, the causal agent of septoria tritici blotch on wheat, and Z. passerinii, the causal agent of septoria speckled leaf blotch of barley, both for which epitypes are designated, two leaf blotch pathogens are also described on graminicolous hosts from Iran. Zymoseptoria brevis sp. nov. is described from Phalaris minor, and Z. halophila comb. nov. from leaves of Hordeum glaucum. Further collections are now required to elucidate the relative importance, host range and distribution of these species.
    Keywords: Hordeum vulgare ; ITS ; LSU ; multilocus sequence typing ; Mycosphaerella ; Septoria ; systematics ; Triticum aestivum
    Repository Name: National Museum of Natural History, Netherlands
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  • 30
    Publication Date: 2022-05-25
    Description: © The Authors 2009. This article is distributed under the terms of the Creative Commons Attribution Noncommercial License. The definitive version was published in Biogeochemistry 99 (2010): 1-13, doi:10.1007/s10533-009-9392-y.
    Description: Human activities have profoundly altered the global nitrogen (N) cycle. Increases in anthropogenic N have had multiple effects on the atmosphere, on terrestrial, freshwater and marine ecosystems, and even on human health. Unfortunately, methodological limitations challenge our ability to directly measure natural N inputs via biological N fixation (BNF)—the largest natural source of new N to ecosystems. This confounds efforts to quantify the extent of anthropogenic perturbation to the N cycle. To address this gap, we used a pair of indirect methods—analytical modeling and N balance—to generate independent estimates of BNF in a presumed hotspot of N fixation, a tropical rain forest site in central Rondônia in the Brazilian Amazon Basin. Our objectives were to attempt to constrain symbiotic N fixation rates in this site using indirect methods, and to assess strengths and weaknesses of this approach by looking for areas of convergence and disagreement between the estimates. This approach yielded two remarkably similar estimates of N fixation. However, when compared to a previously published bottom-up estimate, our analysis indicated much lower N inputs via symbiotic BNF in the Rondônia site than has been suggested for the tropics as a whole. This discrepancy may reflect errors associated with extrapolating bottom-up fluxes from plot-scale measures, those resulting from the indirect analyses, and/or the relatively low abundance of legumes at the Rondônia site. While indirect methods have some limitations, we suggest that until the technological challenges of directly measuring N fixation are overcome, integrated approaches that employ a combination of model-generated and empirically-derived data offer a promising way of constraining N inputs via BNF in natural ecosystems.
    Description: We acknowledge and are grateful for financial support from the Andrew W. Mellon Foundation (C.C. and B.H.), the National Science Foundation (NSF DEB-0515744 to C.C. and A.T. and DEB-0315656 to C.N.), and the NASA LBA Program (NCC5-285 to C.N.).
    Keywords: Amazon Basin ; Ecosystem modeling ; Mass balance ; Nitrogen fixation ; Nutrient cycling ; Rondonia ; Tropical forest
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  • 31
    Electronic Resource
    Electronic Resource
    Springer
    Biology and fertility of soils 30 (2000), S. 363-373 
    ISSN: 1432-0789
    Keywords: Key words Azospirillum species ; Oxygen paradox ; Nitrogen fixation ; Rhizosphere ; Nitrogenase complex
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract  N2 fixation by aerobic bacteria is a very energy demanding process, requiring efficient oxidative phosphorylation, while O2 is toxic for the nitrogenase complex. N2-fixing bacteria have evolved a variety of strategies to cope with this apparent "O2 paradox". This review compares strategies that azospirilla and other well-known N2-fixing soil bacteria use to overcome this O2 paradox. Attention will be given to the relationships between the natural habitat of these soil bacteria and their prevailing adaptations. In view of this knowledge the following questions will be addressed: are the specific adaptations observed in azospirilla sufficient to allow optimal proliferation and N2 fixation in their natural habitat? Could improving the O2 tolerance of the N2-fixing process contribute to the development of more efficient strains for the inoculation of plants?
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  • 32
    ISSN: 1432-0789
    Keywords: Key words Genetic variability ; Vigna unguiculata ; Nitrogen-15 method ; Nitrogen fixation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract  N fixed in 16 cultivars of cowpea [Vigna unguiculata (L.) Walp] inoculated with effective Bradyrhizobium strains collected from the West African MIRCEN culture collection was measured by 15N isotope dilution technique. In all plant parts, significant differences in the percentage of N derived from the atmosphere (%Ndfa) and the amount of Ndfa occurred between the cultivars. Ndoute variety exhibited the highest %Ndfa (74.33% in shoots; 60.90% in roots) and accumulated more fixed N (960 mg N plant–1 and 38 mg N plant–1 in shoots and roots, respectively). Therefore this cultivar should be selected as the highest N-fixing cowpea cultivar. It also should be used in a breeding programme to contribute to the development of cultivars that could stimulate an intensive use of cowpea in many different cropping systems in Africa with a view to maintaining soil fertility.
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  • 33
    ISSN: 1432-0789
    Keywords: Key words Nitrogen-15 isotope dilution ; Legumes ; Lens culinaris ; Rhizobium ; Nitrogen fixation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract  A 15N isotope dilution technique was applied to quantify the extent of N2 fixation in lentil (Lens culinaris Medik.) cultivars as influenced by Rhizobium leguminosarum bv. viciae strains in a field experiment in Pakistan. The experiment was conducted on a soil with a very small indigenous rhizobial population and where N was a limiting factor for crop production. Significant variations in number of nodules, dry weight of nodules, biomass yield, grain yield, total N yield, proportion of plant N derived from N2 fixation (Pfix) and amount of N derived from the atmosphere (Ndfa) were observed among combined treatments of four rhizobial strains and six lentil varieties. In a field previously labelled with 15N, to which a basal dose of 75 kg P2O5 ha–1 was applied as single super phosphate, Ndfa ranged from 15 to 24 kg N ha–1 when calculated according to rhizobial strain and from 4 to 38 kg N ha–1 when calculated according to lentil variety. Lc 26 was the most effective strain and fixed 243% more N than the indigenous population in the uninoculated control. In treatments with the lentil variety PL-406, Ndfa was 38 kg N ha–1, which was 850% higher than with the lentil variety Precoz/F6-20-1×M-85. Generally, the varieties with greater Pfix produced a higher dry matter yield.
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  • 34
    Electronic Resource
    Electronic Resource
    Springer
    Biology and fertility of soils 30 (2000), S. 485-491 
    ISSN: 1432-0789
    Keywords: Key words Herbaspirillum seropedicae ; Burkholderia spp. ; Nitrogen fixation ; Rice ; Gnotobiotic conditions
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract  Four experiments were performed under gnotobiotic conditions to select strains of the endophytic diazotrophs Herbaspirillum seropedicae and Burkholderia spp. as inocula of rice plants. Eighty strains of H. seropedicae originally isolated from rice, sorghum and maize plants, were tested in test tube cultures with N-free agar as the substrate. Rice plants showed medium and high increases in their fresh weight in response to inoculation with nineteen strains. These strains were tested again, and six strains were then selected to evaluate their contribution to the N of the plant via biological N2 fixation (BNF) using an agar growth medium containing 5 mg N l–1of 15N-labelled (NH4)2SO4. The contribution of the strains to plant N via BNF varied from 54% when rice plants were inoculated with strain ZAE94, to 31% when strain ZAE67 was used. These results were confirmed in the fourth gnotobiotic experiment, which also included strains of the new N-fixing bacteria belonging to the genus Burkholderia, isolated from rice, as well as a strain of Burkholderia vietnamiensis, isolated from rice rhizosphere. Burkholderia spp. strains showed similar effects to those observed for H. seropedicae strains, while B. vietnamiensis fixed only 19% of plant total N. The best four strains were tested in a pot experiment where pre-germinated, inoculated rice seedlings were grown in soil labelled with 15N. The results confirmed the gnotobiotic experiments, although the levels of N in the rice plants derived from BNF of the selected H. seropedicae and Burkholderia spp. strains were lower. Nevertheless, there was an increase in N content in grains of inoculated plants, and the results showed that the method used for strain selection is very useful and can be applied to other strains of N2-fixing bacteria and plants.
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  • 35
    ISSN: 1432-0789
    Keywords: Key words Fallow ; Legumes ; Nitrogen fixation ; Oryza sativa ; Côte d'Ivoire
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract  Improving fallow quality in upland rice-fallow rotations in West Africa through the site-specific use of leguminous cover crops has been shown to sustain the productivity of such systems. We studied the effects of a range of residue management practices (removal, burning, mulching and incorporation) on fallow biomass and N accumulation, on weed biomass and yield response of upland rice and on changes in soil physical and chemical characteristics in 2-year field trials conducted in three agroecological zones of Côte d'Ivoire. Across fallow management treatments and agroecological zones, rice yields were on average 20–30% higher in legume than in natural fallow plots. Weed biomass was highest in the savanna zone and lowest in the bimodal forest and tended to be less following a legume fallow. Regardless of the type of fallow vegetation and agroecological zone, biomass removal resulted in the lowest rice yields that varied from 0.5 t ha–1 in the derived savanna zone to 1.5 t ha–1 in the Guinea savanna zone. Burning of the fallow vegetation significantly increased yield over residue removal in the derived savanna (0.27 t ha–1, P〈0.05) and bimodal forest zones (0.27 t ha–1, P〈0.01), but not in the Guinea savanna. In both savanna environments, residue incorporation was superior to the farmers' practice of residue removal and rice yield increases were related to amounts of fallow N returned to the soil (r 2=0.803, P〈0.01). In the forest zone, the farmers' practice of residue burning produced the highest yield (1.43 t ha-1 in the case of legumes) and resulted in the lowest weed biomass (0.02 t ha–1). Regardless of the site, improving the quality of the fallow or of its management had no significant effects on either soil physical or soil chemical characteristics after two fallow cycles. We conclude that incorporation of legume residues is a desirable practice for rice-based fallow rotation systems in savanna environments. No promising residue management alternatives to slash-and-burn were apparent for the forest zone. Determining the possible effects on soil productivity will require longer-term experiments.
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  • 36
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    Nutrient cycling in agroecosystems 56 (2000), S. 59-68 
    ISSN: 1573-0867
    Keywords: bicarbonate-extractable potassium ; muriate of potash ; potassium ; potassium chloride ; relative effectiveness ; silicate rock powder ; Triticum aestivum ; Trifolium subterraneum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Granite (silicate) rock dust, a by-product of quarry operations, is being advocated and used as a fertilizer in the wheatbelt of south-western Australia (WA). The dust is insoluble and based on its nutrient element content (1.9% K and 0.3%P and negligible N) it is not expected to be a useful fertilizer. Previous laboratory studies and glasshouse experiments in WA suggest the dust is a slow release K fertilizer. This paper extends the previous studies to consider the dust as an NP or K fertilizer in the year of application in a field experiment on a soil deficient in N, P and K. In addition, the effectiveness of the dust as a K fertilizer was compared with the effectiveness of KCl (muriate of potash), the K fertilizer used in WA at present, in glasshouse experiments using K deficient soils. In the field experiment, compared with NP fertilizer or NPK fertilizer (urea, supplying N; superphosphate, providing P, S, Ca, Cu, Zn and Mo; KCl providing K), the dust had no effect on grain yield of wheat (Triticum aestivum); in fact dust applied at 20 t ha-1, for unknown reasons, reduced yields by about 65% compared to the nil (no fertilizer, no dust) treatment. Relative to the nil treatment, applying NPK fertilizer increased yields about threefold, from 0.54 to 1.79 t ha. The glasshouse experiments showed that, relative to KCl, the dust was from about 0.02 to 14% as effective in K deficient grey sandy soils for producing dried tops of 30-day old wheat plants or 42-day old clover (Trifolium subterraneum) plants. In soils with adequate K (yellow sands, sandy loams or clays, loamy clays, clay loams and clays), neither KCl nor the dust affected yields of 30 to 42-day old wheat or clover plants grown in the glasshouse. In the glasshouse experiments, no yield depressions were measured for the dust applied up to 17 g dust per kg soil (equivalent to 17 t dust ha-1 mixed into the top 10 cm of soil in the field). It is concluded that the dust has no value as a fertilizer.
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  • 37
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    Nutrient cycling in agroecosystems 56 (2000), S. 117-123 
    ISSN: 1573-0867
    Keywords: labelled nitrogen ; Lolium perenne ; nitrogen cycling ; root biomass ; straw ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Large amounts of nitrogen (N) fertiliser (150–200 kg N/ha) are currently being applied to perennial ryegrass (Lolium perenneL.) seed crops in New Zealand. Due to increasing requirements for efficient use of N fertilisers and minimising nitrate contamination of the environment, a field experiment was established using 15N-labelled fertiliser to follow the fate of applied N. Urea-15N was applied to a perennial ryegrass seed crop in April (30 kg N/ha), August (30 kg N/ha), September (60 kg N/ha) and October (60 kg N/ha). The urea-15N was applied in solution and watered in to minimise volatilisation loss. At the time of harvest (December), 9% of the applied 15N was in the seed, 29% in the straw, 19% in the roots and 39% in the soil organic matter. Losses of 15N were minimal as the N was applied in several applications, each one at a relatively low rate, and at times when leaching was unlikely to occur. Ryegrass plants used a greater proportion of the N applied in September and October (61–65%) compared with that applied in April (44%). Consequently more N was recovered from the soil in the autumn application (57%) than from the September and October applications (28–44%). The availability of the residual fertiliser N to a subsequent wheat (Triticum aestivum L.) crop was studied in a glasshouse experiment. The residual fertiliser N was present in the soil and ryegrass roots and stubble. The wheat plants only recovered 7–9% of this residual N. Most of the N taken up by the wheat came from the soil organic N pool. Overall, applying a total of 180 kg N/ha to the ryegrass appeared to have minimal direct impact on the environment. In the short term N not used by the ryegrass plants contributed to the soil organic N pool.
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  • 38
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    Sciences of soils 5 (2000), S. 10-21 
    ISSN: 1432-9492
    Keywords: Soil temperature ; Triticum aestivum ; Stubble retention ; Nitrogen ; Early growth
    Source: Springer Online Journal Archives 1860-2000
    Topics: Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Early growth and development are often lower when wheat is sown into standing stubble. A study was conducted to determine whether this difference in early growth could be explained by the effects of stubble on soil temperature in the vicinity of the young plant. The roles of nitrogen nutrition and soil strength were also assessed. Three crops were monitored (1990–1992), with the wheat being sown into either standing wheat stubble after a no-till fallow (NT), or into no-tilled plots from which the stubble had been removed by burning (NB). Measurements were made of wheat growth and development, soil and plant N, soil temperature and penetration resistance. The site was on a black earth near Warialda in the northern wheatbelt of New South Wales, Australia. In 1992 wheat was also grown under simulated stubble to isolate the shading and soil temperature effects of stubble from other factors. A significant (P〈0.05) relationship was found between average soil temperature and above ground dry matter (DM) at 65 days after sowing (DAS) but not at 107 DAS. This relationship accounted for differences in DM production at 65 DAS between NT and NB treatments in 1991 and 1992, but not in 1990. In that year the lower DM production in NT plots was associated with poorer N nutrition, and possibly disease. Laboratory incubations indicate that immobilisation of N as stubble decomposed could have contributed to this. Burning stubble produced no immediate increase in soil N availability, so that it is unlikely that N contained in stubble contributed to the difference. Soil strength differences between treatments and phytotoxic effects are unlikely to have contributed to growth differences in this soil.
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  • 39
    ISSN: 1432-2242
    Keywords: Key words Glutenin ; Triticum aestivum ; Wheat storage proteins
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Low-molecular-weight (LMW) glutenin subunits consist mainly of two domains, one at the N- terminus which contains repeats of short amino-acid motifs, and a non-repetitive one rich in cysteine, at the C- terminal region. In previous reports, polyacrylamide-gel electrophoresis has been used to show that large size variation exists among LMW and HMW glutenin subunits, and it has been suggested that deletions and insertions within the repetitive region are responsible for these variations in length. In this study, PCR-amplification of genomic DNA (Triticum aestivum variety Chinese Spring) was used to isolate three full-length LMW glutenin genes: LMWG-MB1, LMWG-MB2 and LMWG-MB3. The deduced amino-acid sequences show a high similarity between these ORFs, and with those of other LMW glutenin genes. Comparisons indicate that LMWG-MB1 has probably lost a 12-bp fragment through deletion and that LMWG-MB1 and LMWG-MB2 have an insertion of 81 bp within the repetitive domain. The current study has shown direct evidence that insertions and/or deletions provide a mechanistic explanation for the allelic variation, and the resultant evolution, of prolamin genes. Single-base substitutions at identical sites generate stop codons in both LMWG-MB2 and LMWG-MB3 indicating that these clones are pseudogenes.
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  • 40
    ISSN: 1432-2242
    Keywords: Key words Wheat ; High-molecular-weight glutenin ; AS-PCR ; Glu-A1 locus ; Null allele ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  The present work reports new PCR markers that amplify the complete coding sequence of the specific alleles of the high molecular weight (HMW) glutenin genes. A set of AS-PCR molecular markers was designed which use primers from nucleotide sequences of the Glu-A1 and Glu-D1 genes, making use of the minor diffeences between the sequences of the x1, x2* of Glu-A1, and the x5 and y10 of Glu-D1. These primers were able to distinguish between x2* and the x1 or xNull of Glu-A1. Also x5 was distinguishable from x2, and y10 from y12. The primers amplified the complete coding regions and corresponded to the upstream and downstream flanking positions of Glu-A1 and Glu-D1. Primers designed to amplify the Glu-A1 gene amplified a single product when used with genomic DNA of common wheats and the xNull allele of this gene. This work also describes the cloning and characterisation of the nucleotide sequence of this allele. It possesses the same general structure as x2* and x1 (previously determined) and differs from these alleles in the extension of the coding sequence for a presumptive mature protein with only 384 residues. This is due to the presence of a stop codon (TAA) 1215-bp downstream from the start codon. A further stop codon (TAG), 2280-bp downstream from the starting codon is also found. The open reading frame of xNull and x1 alleles has the same size in bp. Both are larger than x2* which shows two small deletions. The reduced size of the presumptive mature protein encoded by xNull could explain the negative effect of this allele on grain quality.
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  • 41
    ISSN: 1432-2242
    Keywords: Keywords AFLPs ; Bulked segregant analysis ; Marker-assisted selection ; Microsatellites ; Powdery mildew resistance ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Molecular markers were identified in common wheat for the Pm24 locus conferring resistance to different isolates of the powdery mildew pathogen, Erysiphe graminis DM f. sp. tritici (Em. Marchal). Bulked segregant analysis was used to identify amplified fragment length polymorphism (AFLP) markers and microsatellite markers linked to the gene Pm24 in an F2 progeny from the cross Chinese Spring (susceptible)× Chiyacao (resistant). Two AFLP markers XACA/CTA-407 and XACA/CCG-420, and three microsatellite markers Xgwm106, Xgwm337 and Xgwm458, were mapped in coupling phase to the Pm24 locus. The AFLP marker locus XACA/CTA-407 co-segregated with the Pm24 gene, and XACA/CCG-420 mapped 4.5 cM from this gene. Another AFLP marker locus XAAT/CCA-346 co- segregated in repulsion phase with the Pm24 locus. Pm24 was mapped close to the centromere on the short arm of chromosome 1D, contrary to the previously reported location on chromosome 6D. Pm24 segregated independently of gene Pm22, also located on chromosome 1D. An allele of microsatellite locus Xgwm337 located 2.4±1.2 cM from Pm24 was shown to be diagnostic and therefore potentially useful for pyramiding two or more genes for powdery mildew resistance in a single genotype.
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  • 42
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    Theoretical and applied genetics 100 (2000), S. 32-38 
    ISSN: 1432-2242
    Keywords: Key words Waxy (Wx) protein ; Triticum aestivum ; Amylose content ; Starch ; Rapid Visco-Analyzer ; Swelling power ; Noodle quality
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Waxy (Wx) protein is a granule-bound starch synthase (GBSS) responsible for amylose production in cereal endosperm. Eight isolines of wheat (Triticum aestivum L.) having different combinations of presence and absence of three Wx proteins, Wx-A1, -B1, and -D1, were produced in order to elucidate the effect of Wx protein deficiencies on the apparent amylose content and starch-pasting properties. An improved SDS gel electrophoresis showed that ’Bai Huo’ (a parental wheat) carried a variant Wx-B1 protein from an allele, Wx-B1e. Thus, wheat lines of types 1, 2, 4, and 6 examined in this study contained a variant Wx-B1 allele and not the standard allele, Wx-B1a. The results from 3 years of experiments using 176 lines derived from two cross-combinations showed that apparent amylose content increased the least in type 8 (waxy) having no Wx proteins and, in ascending order, increased in type 5 (only the Wx-A1 protein is present) 〈type 7 (Wx-D1) 〈type 6 (Wx-B1) 〈type 3 (Wx-A1 and -D1) 〈type 4 (Wx-A1 and -B1) 〈type 2 (Wx-B1 and -D1) 〈type 1 (three Wx proteins). However, Tukey’ s studentized range test did not detect significant differences in some cases. Densitometric analysis suggested that the amylose content was related to the amount of the Wx protein in the eight types. Parameters in the Rapid Visco-Analyzer test and swelling power were correlated to amylose content. Consequently, amylose content and pasting properties of starch were determined to be influenced the most by the lack of the Wx-B1 protein, followed by a lack of Wx-D1, and leastly by the Wx-A1 deficiency, which indicated the presence of differential effects of the three null alleles for the Wx protein.
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  • 43
    ISSN: 1432-2242
    Keywords: Keywords Composite populations ; Triticum aestivum ; Blumeria (Erysiphe) graminis f. sp. tritici ; Residual resistance effects ; Quantitative resistance
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  The evolution of adult plant resistance towards powdery mildew (caused by Blumeria graminis f. sp. tritici) was investigated in 11 wheat populations cultivated for 10 years in a French network for dynamic management (DM) of wheat genetic resources. The aims of the study were to compare the evolution of resistance in sites submitted to different powdery mildew pressure and to investigate the implication of specific resistance gene action in adult plant resistance. For this, 7 of the 11 populations were characterized for their composition of specific resistance genes (results presented in a former paper). Even though no population differed significantly from the initial PA0 pool for mean adult plant resistance, divergence appeared among the final populations. The populations with the highest adult plant resistance level originated from sites where powdery mildew pressure is known to be high (Vervins, Le Rheu), whereas populations with the lowest adult plant resistance corresponded to areas with no, or very low, powdery mildew pressure (Toulouse, Montreuil-Bellay). A residual effect of defeated specific resistance genes was hypothesized, as lines accumulating at least two specific resistance genes appeared more resistant. Additional quantitative resistance seemed to be involved in adult plant resistance. DM lines appeared then as an interesting source of variability for resistance towards powdery mildew. Moreover, as these lines had been grown in mixed populations they may be appropriate as components of a composite cultivar.
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  • 44
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    Theoretical and applied genetics 100 (2000), S. 519-527 
    ISSN: 1432-2242
    Keywords: Key words Wheat ; Triticum aestivum ; Physical mapping ; Deletion lines ; RFLP
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Extended physical maps of chromosomes 6A, 6B and 6D of common wheat (Triticum aestivum L. em Thell., 2n=6x=42, AABBDD) were constructed with 107 DNA clones and 45 homoeologous group-6 deletion lines. Two-hundred and ten RFLP loci were mapped, including three orthologous loci with each of 34 clones, two orthologous loci with each of 31 clones, one locus with 40 clones, two paralogous loci with one clone, and four loci, including three orthologs and one paralog, with one clone. Fifty five, 74 and 81 loci were mapped in 6A, 6B and 6D, respectively. The linear orders of the mapped orthologous loci in 6A, 6B and 6D appear to be identical and 65 loci were placed on a group-6 consensus physical map. Comparison of the consensus physical map with eight linkage maps of homoeologous group-6 chromosomes from six Triticeaespecies disclosed that the linear orders of the loci on the maps are largely, if not entirely, conserved. The relative distributions of loci on the physical and linkage maps differ markedly, however. On most of the linkage maps, the loci are either distributed relatively evenly or clustered around the centromere. In contrast, approximately 90% of the loci on the three physical maps are located either in the distal one-half or the distal two-thirds of the six chromosome arms and most of the loci are clustered in two or three segments in each chromosome.
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  • 45
    ISSN: 1432-2242
    Keywords: Key words Composite populations ; Triticum aestivum ; Blumeria (Erysiphe) graminis f. sp. tritici ; Selection ; Drift
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Dynamic management has been proposed as a complementary strategy to gene banks for the conservation of genetic resources. The evolution of frequencies of genes for specific resistance towards powdery mildew (caused by Blumeria graminis f. sp. tritici) in populations of a French network for dynamic management of bread wheat genetic resources was investigated after 10 years of multiplication without human selection. The objective was to determine whether specific resistance gene diversity was maintained in the populations and whether any changes could be attributed to selection due to pathogen pressure. Seven populations, originating from four of the network sites, were characterized and compared to the initial population for six specific resistance gene frequencies detected by nine Blumeria graminis f. sp. tritici isolates. Diversity decreased at the population level, but because of a strong differentiation between the populations, this diversity was maintained at the network level. The comparison of Fst parameters estimated on neutral markers (RFLP) and on resistance gene data revealed that in two of the populations specific resistance genes had been selected by pathogen pressure, whereas evolution in two other populations seemed to be the result of genetic drift. For the three last populations, conclusions were less clear, as one had probably experienced a strong bottleneck and the other two presented intermediate Fst values. A dynamic management network with sites contrasted for pathogen pressure, allowing genetic drift in some populations and selection in others, appeared, at least on the short term, to be a good tool for maintaining the diversity of genes for specific resistance to powdery mildew.
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  • 46
    ISSN: 1615-6102
    Keywords: Endoplasmic reticulum ; High-pressure freezing ; Nitrogen fixation ; Rhizobium leguminosarum ; Propane-jet freezing ; Peribacteroid space
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary Pea (Pisum sativum) root nodule cells infected by the diazotrophRhizobium leguminosarum have been well characterized by chemical fixation techniques. Propane-jet freezing and high pressure freezing were used in this study to compare rapidly frozen and chemically fixed pea root nodule cells. Cells that had been incubated in 2-(N-morpholino)ethanesulfonic acid buffer and frozen with the propane-jet freezer were better preserved than cells that had been chemically fixed or frozen with the high-pressure freezer. Rapidly frozen infected nodule cells showed that the rough endoplasmic reticulum had a high frequency of associations with the peribacteroid membrane and the infection thread. The peribacteroid space also varied in size depending on the method of preservation; however, it was most reduced in size and devoid of inclusions in the propane-jet frozen tissue. The biological significance of these observations is discussed.
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  • 47
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    Russian journal of plant physiology 47 (2000), S. 734-739 
    ISSN: 1608-3407
    Keywords: Triticum aestivum ; bioelectric potentials ; frost resistance ; critical points
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Winter wheat (Triticum aestivum L.) seedlings of three cultivars differing in frost resistance were used to study cooling-induced changes in the bioelectric potential. Measurements were performed with nonfreezing graphite–glycerol electrodes in the regime of monitoring. Upon a gradual change in air temperature from 20 to –15°C at the rates of 20 and 2°C/h, the bioelectric potential underwent abrupt transitions at certain moments, indicating changes in the physiological condition of plants. The time required for the achievement of these critical states, as well as the survival of plants after thawing, depended both on the temperature and the cooling rate. Apparently, these characteristics were related to the dynamics of phase transitions of water. Cultivar-specific features were manifested in the different abilities of plants to maintain free water in a supercooled state. It is supposed that the critical points are related to the cold resistance of colloid systems and to the temperature lethal for plants.
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  • 48
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    Plant and soil 226 (2000), S. 11-19 
    ISSN: 1573-5036
    Keywords: Chlorpropham (CIPC) ; microtubules ; nuclei ; recovery ; roots ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The present ultrastructural investigation on the effects of 50 μM chlorpropham (previously called CIPC) on growing roots of wheat (Triticum aestivum (L.) Thell cv. Vergina) was undertaken to clarify the mechanism of a carbamate herbicide action in plant cells, since the wide range of responses of plant cells to carbamate herbicides is based mainly on immunofluorescence studies. Cells of control roots contained abundant microtubules both in interphase and mitotic arrays. In chlorpropham-treated roots, however, no microtubules could be detected at all, neither in dividing nor in differentiating cells. Cycling cells became binucleate, polyploid or contained incomplete cell walls, the result of inhibition of cytokinesis. In long-term drug treatments (24 h or more) the affected cells entered a new cycle, which, however, did not progress beyond mid-metaphase. The nuclei of binucleate cells initiated prophase synchronously. Small vacuoles and Golgi vesicles were trapped within the nucleoplasm of the multilobed nuclei. In roots recovering from 8 h chlorpropham treatment, cells continued to exhibit polyploid nuclei, intranuclear vacuoles and incomplete walls. Microtubules reappeared but they were sparse and lacked a definite orientation. Preprophase cells did not form normal preprophase bands of microtubules, while mitotic cells occasionally contained microtubules bound to chromosomes and converged to minipoles. It is concluded that chlorpropham disorganized directly microtubules in addition to irreversibly affecting microtubule organizing centres, which failed to further support microtubule arrays.
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  • 49
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    Plant and soil 226 (2000), S. 275-285 
    ISSN: 1573-5036
    Keywords: arbuscular mycorrhiza ; Daucus carota ; Glomus mosseae ; Glomus intraradices ; monoxenic culture ; N uptake ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract New information on N uptake and transport of inorganic and organic N in arbuscular mycorrhizal fungi is reviewed here. Hyphae of the arbuscular mycorrhizal fungus Glomus mosseae (Nicol. and Gerd.) Gerd. and Trappe (BEG 107) were shown to transport N supplied as 15N-Gly to wheat plants after a 48 h labelling period in semi-hydroponic (Perlite), non-sterile, compartmentalised pot cultures. Of the 15N supplied to hyphae in pot cultures over 48 h, 0.2 and 6% was transported to plants supplied with insufficient N or sufficient N, respectively. The increased 15N uptake at the higher N supply was related to the higher hyphal length density at the higher N supply. These findings were supported by results from in vitro and monoxenic studies. Excised hyphae from four Glomus isolates (BEG 84, 107, 108 and 110) acquired N from both inorganic (15NH4 15NO3, 15NO3 − or 15NH4 +) and organic (15N-Gly and 15N-Glu, except in BEG 84 where amino acid uptake was not tested) sources in vitro during short-term experiments. Confirming these studies under sterile conditions where no bacterial mineralisation of organic N occurred, monoxenic cultures of Glomus intraradices Schenk and Smith were shown to transport N from organic sources (15N-Gly and 15N-Glu) to Ri T-DNA transformed, AM-colonised carrot roots in a long-term experiment. The higher N uptake (also from organic N) by isolates from nutrient poor sites (BEG 108 and 110) compared to that from a conventional agricultural field implied that ecotypic differences occur. Although the arbuscular mycorrhizal isolates used contributed to the acquisition of N from both inorganic and organic sources by the host plants/roots used, this was not enough to increase the N nutritional status of the mycorrhizal compared to non-mycorrhizal hosts.
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  • 50
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    Plant cell, tissue and organ culture 63 (2000), S. 35-40 
    ISSN: 1573-5044
    Keywords: anther culture ; EDTA ; ferrous ions ; ferric ions ; Hordeum vulgare ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A suitable form of iron supplement in the induction medium was found to be important for further development of induced pollen embryos in barley and wheat cultivars (genotypes), especially those providing few green plants viain vitro androgenesis. Genotypes able to regenerate many green plants were less susceptible to the lack of iron in induction medium. Although Fe-EDTA was found to be a suitable form of iron in the induction medium, androgenesis was also induced on media containing non-chelated iron (Fe2+ and Fe3+ ions). EDTA alone without iron inhibited the androgenic response even in the wheat cv. Florida, a model cultivar for androgenesis in wheat. In all barley cultivars under study including cv. Igri, a model cultivar for androgenesis in barley, EDTA alone caused an almost total suppression of androgenesis.
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  • 51
    ISSN: 1573-5060
    Keywords: Cheyenne ; polymorphism ; RAPD ; recombinant inbred chromosome line(RICL) RFLP ; STS ; SSR ; Triticum aestivum ; Wichita
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Previously chromosome 3A of wheat (Triticum aestivum L.) was reported to carry genes influencing yield, yield components, plant height, and anthesis date. The objective of current study was to survey various molecular marker systems for their ability to detect polymorphism between wheat cultivars Cheyenne(CNN) and Wichita (WI), particularly for chromosome3A. Seventy-seven `sequence tagged site' (STS), 10simple sequence repeat (SSR), 40 randomly amplified polymorphic DNA (RAPD) markers, and 52 restriction fragment length polymorphism (RFLP) probes for wheat homoeologous group 3 chromosomes, were investigated. Three (3.9%) STS-PCR primer sets amplified polymorphic fragments for the two cultivars, of which one was polymorphic for chromosome 3A. Sixty percent of SSR markers detected polymorphism between CNN and WI of which 50% were polymorphic for chromosome 3A. Twenty percent of RAPD markers detected polymorphism between CNN and WI in general, but none of these detected polymorphism for chromosome 3A. Of the fifty-two RFLP probes, 78.8% detected polymorphism between CNN and WI for group 3 chromosomes with one or more of seven restriction enzymes and 42% of the polymorphic fragements were for chromosome 3A. These high levels of RFLP and SSR polymorphisms between two related wheat cultivars could be used to map and tag genes influencing important agronomic traits. It may also be important to reconsider RFLP as the most suitable marker system at least for anchor maps of closely related wheat cultivars.
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  • 52
    ISSN: 1573-5060
    Keywords: complementary genes ; hybrid necrosis ; spring wheat ; Triticum aestivum ; winter wheat ; winter × springwheat hybridization
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The distribution and allelic expressivity of hybrid necrosis genes (Ne 1 and Ne 2) were studied in 21 winter (mostly exotic) and 43 spring type elite wheat genotypes, by crossing them with two known testers, C 306 (Ne 1-carrier) and HD 2380 (Ne 2-carrier).Ne 1 gene was present in one north-west Himalayan winter wheat landrace, Shoure Local, but absent in the other winter as well as spring wheats. Ne 2 gene was prevalent to a much lower extent in the exotic winter wheat germplasm (31.57%) as compared to the recently developed Indian and Mexican spring wheat semidwarfs (69.80%). This may suggest that breeders have tried to preclude hybrid necrosis by selecting for non-carrier genotypes in the development of exotic winter wheats in contrast to the situation in spring wheats. Based on the degree of expression of hybrid necrosis genes in the F1 hybrids, the carrier genotypes were characterized with respect to the allelic strength of the hybrid necrosis genes. The 27 non-carrier genotypes of the two ecotypes identified in the present study have a greater potential use in future hybridization programmes so as to overcome the problem of hybrid necrosis.
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  • 53
    ISSN: 1573-5060
    Keywords: allelic variation ; Chinese wheat ; glutenin subunit ; seed storage protein ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Variation in the electrophoretic banding patterns of high-molecular-weight (HMW) glutenin subunits of 274hexaploid wheat (Triticum aestivum) varieties from China was examined by sodium dodecyl sulfate polyacrylamide gel electrophoresis and 27 different major HMW glutenin subunits were identified. Each variety contained three to five subunits and 29different glutenin subunit patterns were observed in274 Chinese hexaploid wheats. Seventeen alleles were identified based on the comparison of subunits mobility with that previously identified in a set of standard hexaploid wheats. The Chinese hexaploid wheats exhibited allelic variation in HMW glutenin subunit composition and the variation differed from that of Japanese and hexaploid wheats of other countries.
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  • 54
    ISSN: 1573-5060
    Keywords: bunt infection ; bunt resistance ; frost resistance ; Tilletia caries ; T. foetida ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract In order to determine the effects of bunt inoculation on frost resistance and winter hardiness in lines containing resistance genes, the bunt [Tilletia foetida (Wallroth) Liro, T. caries (DC.) Tulasne] susceptibility of wheat lines containing bunt resistance genesBt1 to Bt10 and the effect of the year on the degree of infection were studied over six years from 1991 to 1997 in an artificial inoculation nursery. Uninoculated and artificially inoculated wheat plants were tested for frost resistance in the phytotron in 1995 and in the field in boxes in three years from 1994/95 to 1996/97. The line withBt10 was very resistant, lines with Bt5, Bt6, Bt8 and Bt9 were resistant, the line with Bt4 was moderately resistant, those with Bt2 and Bt3 were moderately susceptible, the line with Bt1 was susceptible and the line with Bt7 was very susceptible to the local bunt population in Hungary. Bunt incidence also varied over years. The frost resistance of the Bt lines was generally lower after bunt inoculation than that of uninoculated plants. The increased frost kill in inoculated plants was not correlated with the extent of varietal susceptibility to bunt. Some lines with resistance, namely those with Bt5 (1.6% infection), Bt8 (0.6%) and Bt10 (0.0%), suffered significantly greater frost kill in the young plant stage as the result of bunt inoculation. By contrast, the Bt7line had excellent frost resistance and winter hardiness but suffered the greatest extent of bunt infection, whereas the Bt6 line had good frost resistance and good bunt resistance.
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  • 55
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    Plant and soil 222 (2000), S. 25-34 
    ISSN: 1573-5036
    Keywords: deficiency ; genotypic differences ; iron ; nutrient efficiency ; phytosiderophore ; tolerance ; Triticum aestivum ; Triticum durum ; zinc
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Tolerance to Zn deficiency in wheat germplasm may be inversely related to uptake and transport of Fe to shoots. The present study examined eight bread (Triticum aestivum) and two durum (T. turgidum L. conv. durum) wheat genotypes for their capacity to take up and transport Fe when grown under either Fe or Zn deficiency. Bread wheat genotypes Aroona, Excalibur and Stilleto showed tolerance to Zn and Fe deficiency, while durum wheat genotypes are clearly less tolerant to either deficiency. Roots of bread wheats tolerant to Zn deficiency exuded more phytosiderophores than sensitive bread and durum genotypes. Greater amounts of phytosideophores were exuded by roots grown under Fe than Zn deficiency. A relatively poor relationship existed between phytosiderophore exudation or the Fe uptake rate and relative shoot growth under Fe deficiency. At advanced stages of Zn deficiency, genotypes tolerant to Zn deficiency (Aroona and Stilleto) had a greater rate of Fe uptake than other genotypes. Zinc deficiency depressed the rate of Fe transport to shoots in all genotypes in early stages, while advanced Zn deficiency had the opposite effect. Compared with Zn-sufficient plants, 17-day-old Zn-deficient plants of genotypes tolerant to Zn deficiency had a lower rate of Fe transport to shoots, while genotypes sensitive to Zn deficiency (Durati, Yallaroi) had the Fe transport rate increased by Zn deficiency. A proportion of total amount of Fe taken up that was transported to shoots increased with duration of either Fe or Zn deficiency. It is concluded that greater tolerance to Zn deficiency among wheat genotypes is associated with the increased exudation of phytosiderophores, an increased Fe uptake rate and decreased transport of Fe to shoots.
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  • 56
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    Euphytica 112 (2000), S. 23-31 
    ISSN: 1573-5060
    Keywords: A granules ; B granules ; quantitative analysis ; starch quality ; triploid endosperm ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Two lines of hexaploid wheat were crossed and the basic generations of parent, F1, F2 and back-cross were sown in a controlled-environment chamber. FreshF1 and back-cross grains were generated, so the material could be handled either as the standard set of basic generations on a whole-plant basis, or as an extended set on an embryo or endosperm basis. The experiment was repeated. Mature grains were harvested and the starch particle size distribution was analysed in 3284 grains from 111 plants. Means and variances were partitioned into additive, dominance and interaction components. Grains from cross-pollinations had B-granule contents between parental values, rather than of the maternal parent, indicating an involvement of the grain genotype. Quantitative models based on endosperm genotype gave a better fit to the data than those based on embryo genotype. The difference in starch B-granule content between the parents was largely due to additive genes. Dominant genes were also indicated, with the first dose in the triploid endosperm having a large effect while the second dose had little or none. Non-allelic interactions were significant in the second experiment where the use of more types of backcross made them more detectable. There were also small and significant residual effects of the maternal plant in the first experiment, attributed to the vigour of the F1 mother plant and to the cytoplasm of Sunco. Narrow-sense heritability was low, between 0.05and 0.18 depending on the generation. Transgressive segregation was not found, suggesting that all alleles tending to increase the B-granule content were found in the Sunco parent and none in ME71. There was also no detectable heterosis in this character. The results show that breeding and selection for a low B-granule content should be possible but a further reduction will require new and complementary genes.
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  • 57
    ISSN: 1573-5060
    Keywords: disease resistance ; doubled haploid ; Fusarium headblight ; genetic analysis ; Fusarium graminearum ; recombinant inbred ; Triticum aestivum ; wheat scab
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The genetic constitution of resistance to Fusarium head blight (FHB, scab) caused by Fusarium graminearum in the Chinese wheat cultivar Sumai 3 and the Japanese cultivar Saikai 165 was investigated using doubled haploid lines (DHLs) and recombinant inbred lines (RILs). Frequency distributions of DHLs derived from two F1 crosses, Sumai 3 (very resistant to resistant; VR-R) / Gamenya (very susceptible; VS) and Sumai 3 / Emblem (VS), fitted well to 1: 2: 1 (resistant: moderately resistant: susceptible) ratios for reaction to FHB in the field. It is suggested that the resistance of Sumai 3 is controlled by two major genes with additive effects. One of the resistance genes may be linked in repulsion to the dominant suppressor B1 for awnedness with recombination values 15.1 ± 3.3% in Sumai 3 /Gamenya and 21.4 ± 4.3% in Sumai 3 / Emblem. Saikai 165 is a Japanese resistant line derived from an F1 Sumai 3 / Asakaze-komugi (moderately resistant; MR). The data for RILs derived from the cross Emblem / Saikai 165, indicates that three resistance genes control the resistance of Saikai 165.
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  • 58
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    Euphytica 113 (2000), S. 219-225 
    ISSN: 1573-5060
    Keywords: deficiency ; genotypic variation ; iron ; nutrient efficiency ; phytosiderophore ; Triticum aestivum ; Triticum durum ; zinc
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Tolerance to Fe deficiency of wheat genotypes exhibiting differential tolerance to Zn deficiency is not known, even though the relationship between Fe nutrition and differential tolerance of wheat genotypes to Zn deficiency has been hypothesised frequently. In the present experiment, eight Triticum aestivum and two T. turigidum L. conv. durum cultivars were grown in nutrient solution deficient in either Znor Fe. Three indices of tolerance to nutrient deficiency were compared: relative [(-nutrient/+nutrient) × 100] shoot growth, shoot dry weight under nutrient deficiency and relative shoot/root dry weight ratio. Genotypes Aroona, Excalibur, Stilleto and Trident were classified as tolerant to both Zn and Fe deficiency, while durum wheats Durati and Yallaroi were sensitive to Zn deficiency and moderate to sensitive to Fe deficiency. Genotypes Excalibur, Stilleto and Trident come from the same breeding programme and have the common parent (line MEC3 =Sonora64//TZPP/YAQUI54) that could have been the donor of the genes for tolerance to Zn deficiency. When Fe-deficient, all wheat genotypes were severely chlorotic but kept producing shoot and root dry matter at a relatively high rate, making the relationship between the relative shoot growth and the relative leaf chlorophyll content poor. This is the first report of wheat genotypes exhibiting multiple tolerance to Zn and Fe deficiencies.
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  • 59
    ISSN: 1573-5060
    Keywords: bread wheat ; breeding and environmental effects ; gene frequency ; geographical distribution ; hybrid necrosis ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Using the Information and Analytical System of Wheat Genetic Resources GRIS 3.2, the peculiarities of distribution of hybrid necrosis genes in bread wheat in different regions of the world were analyzed. Considerable variation in frequencies of the Ne1 and Ne2 genes in regions with different moisture and heat supply was revealed. A significant effect of breeding on frequency dynamics of different genotypes Ne1ne2, ne1Ne2 and ne1ne2 was confirmed.
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  • 60
    ISSN: 1573-5087
    Keywords: abscisic acid ; drought stress ; Triticum aestivum ; wheat germ agglutinin
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Expression of wheat germ agglutinin (WGA) gene inthe developing embryos of wheat (Triticumaestivum L. cv. C-306) was studied in relation toabscisic acid (ABA) accumulation under water stressconditions. Imposition of water stress resulted inelevated ABA levels in the embryos at threedevelopmental stages (18, 24 and 30 DPA). On thecontrary, the effect of drought stress on WGAaccumulation was stage dependent with significantincrease in WGA content being observed at only 24 DPA. Our results suggest that apart from ABA, otherfactors which are temporally expressed, are alsoinvolved in regulation of WGA gene expression.
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  • 61
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    Genetic resources and crop evolution 47 (2000), S. 281-284 
    ISSN: 1573-5109
    Keywords: agronomic traits ; isozymes ; landrace ; Triticum aestivum ; variation ; wheat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract A sample of an Argentinean landrace of wheat showed considerable variation in most of the evaluated morphological and agronomic characters. However, analyses with high molecular glutenins and two isozyme systems, known to be highly polymorphic among current cultivars, revealed very little or no variation, respectively. The large difference in the observed variation between morphoagronomic and biochemical characters is discussed.
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  • 62
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    Journal of chemical ecology 26 (2000), S. 2141-2154 
    ISSN: 1573-1561
    Keywords: Allelopathy ; phenolic acids ; 2,4-dihydroxy-7-methoxy-1,4-benzoxazin-3-one ; DIMBOA ; GC-MS-MS ; wheat ; Triticum aestivum ; weed suppression ; annual ryegrass ; Lolium rigidum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Abstract Wheat allelopathy has potential for weed suppression. Allelochemicals were identified in wheat seedlings, and they were exuded from seedlings into agar growth medium. p-Hydroxybenzoic, trans-p-coumaric, cis-p-coumaric, syringic, vanillic, trans-ferulic, and cis-ferulic acids and 2,4-dihydroxy-7-methoxy-1,4-benzoxazin-3-one (DIMBOA) were identified in both the shoots and roots of 17-day-old wheat seedlings and their associated agar growth medium. Wheat accessions with previously identified allelopathic activity tended to contain higher levels of allelochemicals than poorly allelopathic ones. The allelopathic compounds present in the shoots generally also were identified in the roots and in the agar medium. Allelochemicals were distributed differentially in wheat, with roots normally containing higher levels of allelochemicals than the shoots. When the eight allelochemicals were grouped into benzoic acid and cinnamic acid derivatives, DIMBOA, total coumaric, and total ferulic acids, the amount of each group of allelochemicals was correlated between the roots and the shoots. Most of the allelochemicals identified in the shoots and roots could be exuded by the living roots of wheat seedling into the agar growth medium. However, the amounts of allelochemicals in the agar growth medium were not proportional to those in the roots. Results suggest that wheat plants may retain allelochemicals once synthesized. The presence of allelochemicals in the agar growth medium demonstrated that wheat seedlings were able to synthesize and to exude phytotoxic compounds through their root system that could inhibit the root growth of annual ryegrass.
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  • 63
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    Nutrient cycling in agroecosystems 56 (2000), S. 109-116 
    ISSN: 1573-0867
    Keywords: labelled nitrogen ; Lolium perenne ; nitrogen cycling ; root biomass ; straw ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract A field trial was carried out to compare the transformations and plant uptake of urine N and S in a short-term pasture from within an arable/pasture ley rotation and a long-term pasture. Animal urine labelled with 15N and 35S was applied to microplots at both sites. These microplots were destructively sampled at various time intervals over 12 months and analysed for 15N and 35S. It is known that soil organic matter accumulates under short-term pastures compared with a long-term pasture in which accumulation and degradation are in balance. Consequently, it was hypothesised that immobilization of urine N and S is more intense in the short-term. However, in this study there was considerably less immobilization of 15N and 35S into soil organic forms under short-term pasture than long-term pasture. This was attributable to a greater pasture dry matter response to urine application under the short-term pasture (due to its inherently low N fertility) resulting in a greater plant uptake of 15N and 35S with less 15N and 35S consequently being available for immobilization. At both sites, all of the applied 35S was accounted for through plant uptake and recovery in the soil, but 21–48% of the 15N was unaccounted for and presumed to have been lost through gaseous emissions. It was concluded that accumulation of soil organic N and S under short-term pastures is likely to be attributable to turnover of plant residues (particularly root material) and does not appear to be related to immobilization in urine patches.
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  • 64
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    Plant cell, tissue and organ culture 60 (2000), S. 69-73 
    ISSN: 1573-5044
    Keywords: cereals ; tissue culture ; Triticum durum ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Fertile, green plants were regenerated from immature inflorescence explants from each of four Canadian wheat cultivars. The cultivars were representative of four classes of Canadian wheat. Explants from immature inflorescences of three size ranges were cultured on two types of media: MSI/MSR, which contains 1650 mg l-1 NH4NO3and sucrose as a carbon source, and BII/BIR, which contains 250 mg l-1 NH4NO3and maltose as a carbon source. Regeneration from all cultivars was significantly better on BII/BIR media than on MSI/MSR media. On BII/BIR media, `AC Karma', `Plenty', and `Fielder' gave the highest number of shoots per 10 explants, where the explants were derived from immature inflorescences 5.1 to 10.0 mm in length. 'Columbus' did not regenerate on MSI/MSR medium, and regenerated poorly on BII/BIR medium. Differences were found between cultivars with regard to the number of regenerant plants produced with the best treatments: `Plenty' produced 16.1 shoots per 10 explants, `AC Karma' 12.4, `Fielder' 6.4, and `Columbus' 2.2.
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  • 65
    ISSN: 1573-5060
    Keywords: biochemical marker ; gene location ; Lophopyrum elongatum ; Puccinia striiformis ; stripe rust ; substitution line ; Triticum aestivum ; yellow rust
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract A set of T. aestivum-L. elongatum chromosome substitution lines was tested for yellow rust resistance at the seedling stage. Inheritance of the resistance and esterase-5 (Est-5) variation were studied. The results demonstrated that L.elongatum carried a new gene(s) conferring yellow rust resistance. This gene was dominant and located on chromosome 3E of L. elongatum. The biochemical locus encoding Est-5was also located on chromosome 3E, and co-segregated with theYr gene(s) in the wheat background. The transmission frequencies of chromosome 3E in 3E(3A) × CS, 3E(3B) × CS and 3E(3D) × CS hybrids were scored.None of the hybrids transmitted the alien chromosome at thetheoretical maximum rate, but the transmission frequencies ofchromosome 3E in F2 populations of 3E(3A) × CS and 3E(3D) × CS were significantly higher than in thatof 3E(3B) × CS.
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  • 66
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    Euphytica 111 (2000), S. 199-203 
    ISSN: 1573-5060
    Keywords: Diuraphis noxia (Mordvilko) ; protein ; Russian wheat aphid ; Triticum aestivum ; wheat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The Russian wheat aphid (RWA), Diuraphis noxia (Mordvilko), has become a perennial, serious pest of wheat (Triticum aestivum L.) in the western United States. Current methodologies used to enhance RWA resistance in wheat germplasm could benefit from an understanding of the biochemical mechanisms underlying resistance to RWA. This study was initiated to identify specific polypeptides induced by RWA feeding that may be associated with RWA resistance. The effects of RWA feeding on PI 140207 (a RWA-resistant spring wheat) and Pavon (a RWA-susceptible spring wheat) were examined by visualizing, silver-stained denatured leaf proteins separated by two-dimensional polyacrylamide gel electrophoresis. Comparisons of protein profiles of noninfested and RWA-infested Pavon and PI 140207 revealed a 24-kilodalton-protein complex selectively inhibited in Pavon that persisted in PI 140207during RWA attack. No other significant qualitative or quantitative differences were detected in RWA-induced alterations of protein profiles. These results suggest that RWA feeding selectively inhibit synthesis and accumulation of proteins necessary for normal metabolic functions in susceptible plants.
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  • 67
    ISSN: 1573-5036
    Keywords: plant uptake ; potassium ; potassium starvation ; radiocaesium ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Short term experiments were carried out to investigate the effect of internal tissue potassium concentration on the uptake of radiocaesium by spring wheat (Triticum aestivum cv. Tonic). The results showed that potassium starvation increased Cs influx rates by a factor of 10 compared with non-starved plants. Solution to plant tissue transfer factor (TF) values also increased by around an order of magnitude after potassium starvation treatment. The enhancement of Cs influx rates by potassium starvation could be offset by an increase in external potassium concentration: this effect is minimal at external potassium concentrations greater than approximately 200 μM (8 mg L-1). This reveals that Cs influx into plant roots is subject to control by both internal and external potassium status. The kinetics of Cs uptake by potassium in starved and non-starved plants can be described adequately by the Michaelis-Menten equation. It was shown that potassium starvation substantially reduces the Km value from approximately 28 to 6 μM, which suggests that starvation treatment increases significantly the affinity of plant roots for Cs+. Mechanisms involved in K-Cs interactions during plant uptake are discussed in this paper. Finally, the relevance of such mechanisms as determinants of radiocaesium uptake by plants growing under different ecological conditions is emphasised.
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  • 68
    ISSN: 1573-5060
    Keywords: genetic diversity ; germplasm ; RFLP ; Triticum aestivum ; wheat breeding
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract A set of 292 accessions of common wheat (Triticum aestivum L.) representing 21 germplasm pools based on geographical or breeding program origins was assayed for RFLP diversity. Thirty cDNA and genomic DNA probes and the HindIII restriction enzyme were employed for RFLP analysis. About 61% of all 233 scored bands were present in 75% or more of the accessions. All but one of the 30 probes revealed polymorphism, and the average number of distinct patterns per probe over all accessions was 9.5.Polymorphic Information Content (PIC) values within a pool varied from 0 to 0.9 and depended on the identities of both the germplasm pool and the probe. Rare banding patterns with a relative frequency of ≤0.2 within a pool were detected. These rare patterns were more likely to occur in pools exhibiting high levels of heterogeneity. The highest level of polymorphism was observed in the Turkish landraces from Southwest Asia. The Eastern U.S. soft red winter wheat germplasm pool was more genetically diverse than the other advanced germplasm pools, and nearly as diverse as the Turkish landrace pool. RFLP-based genetic relationships between germplasm pools generally tracked expectations based on common geographical origin, breeding history and/or shared parentages. The Chinese wheat landraces from Sichuan, Tibet, and Yunnan provinces were distinct from other pools. Similarity matrices for among-pool genetic distance estimates based on either band frequencies or banding pattern frequencies showed good correlation with matrices derived from Nei and Li's mean genetic similarity estimates (r=−0.82** and r=−0.73**, respectively.
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  • 69
    ISSN: 1573-5079
    Keywords: canopy architecture ; canopy photosynthesis ; CO2 enrichment ; global change ; leaf area index ; leaf tip angle ; nitrogen stress ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The response of whole-canopy net CO2 exchange rate (CER) and canopy architecture to CO2 enrichment and N stress during 1996 and 1997 for open-field-grown wheat ecosystem (Triticum aestivum L. cv. Yecora Rojo) are described. Every Control (C) and FACE (F) CO2 treatment (defined as ambient and ambient +200 μmol mol−1, respectively) contained a Low- and High-N treatment. Low-N treatments constituted initial soil content amended with supplemental nitrogen applied at a rate of 70 kg N ha−1 (1996) and 15 kg N ha−1 (1997), whereas High-N treatments were supplemented with 350 kg N ha−1 (1996 and 1997). Elevated CO2 enhanced season-long carbon accumulation by 8% and 16% under Low-N and High-N, respectively. N-stress reduced season-long carbon accumulation 14% under ambient CO2, but by as much as 22% under CO2 enrichment. Averaging both years, green plant area index (GPAI) peaked approximately 76 days after planting at 7.13 for FH, 6.00 for CH, 3.89 for FL, and 3.89 for CL treatments. Leaf tip angle distribution (LTA) indicated that Low-N canopies were more erectophile than those of High-N canopies: 48° for FH, 52° for CH, and 58° for both FL and CL treatments. Temporal trends in canopy greenness indicated a decrease in leaf chlorophyll content from the flag to flag-2 leaves of 25% for FH, 28% for CH, 17% for CL, and 33% for FL during 1997. These results indicate that significant modifications of canopy architecture occurs in response to both CO2 and N-stress. Optimization of canopy architecture may serve as a mechanism to diminish CO2 and N-stress effects on CER.
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    Chromosome research 8 (2000), S. 671-676 
    ISSN: 1573-6849
    Keywords: meiotic metaphase I pairing ; recombinant isochromosome ; Triticum aestivum ; Triticum dicoccoides
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A recombinant isochromosome i5BLrec of wheat was developed with one arm and the proximal 36% of the other arm of Chinese Spring (CS) origin and the distal 64% of the recombined arm of Triticum turgidum subsp. dicoccoides origin. The i5BLrec} provides an unusual opportunity to analyze the role of the centromere or arm heterozygosity in chromosome prealignment and synapsis during meiosis. In monosomic condition, the i5BLrec formed a ring univalent in 86.8% of the pollen mother cells (PMCs) at meiotic metaphase I. In the disomic condition, the two i5BLrec preferentially paired as a normal bivalent in 74.8% of the PMCs, which differed significantly (p〈0.01) from the normal bivalent pairing of 51% observed in diisosomic 5BL chromosomes of the CS (Di5BLCS) control plants. In plants with one i5BLrec and a normal 5BCS, the long arm of 5BCS paired with the homologous arm of i5BLrec in 54.4% of the PMCs, and 40.4% of the PMCs had a 5BCS univalent and a i5BLrec ring univalent. The implications of the i5BLrec pairing data on the mechanism of Ph1 gene action are discussed.
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    Chromosome research 8 (2000), S. 501-511 
    ISSN: 1573-6849
    Keywords: BFB cycle ; chromosome healing ; gametocidal factor ; rye deficiencies ; Secale cereale ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The gametocidal factor on the Aegilops cylindrical chromosome 2Cc was used to induce and analyze the nature of chromosomal rearrangements in rye chromosomes added to wheat. For this purpose we isolated plants disomic for a given rye chromosome and monosomic for 2Cc and analyzed their progenies cytologically. Rearranged rye chromosomes were identified in 7% of the progenies and consisted of rye deficiencies (4.6%), wheat–rye dicentric and rye ring chromosomes (1.8%), and terminal translocations (0.6%). The dicentric and ring chromosomes initiated breakage–fusion–bridge cycles (BFB) that ceased within a few weeks after germination as the result of chromosome healing. Of 56 rye deficiencies identified, after backcrossing and selfing, only 33 were recovered in either homozygous or heterozygous condition covering all rye chromosomes except 7R. The low recovery rate is probably caused by the presence of multiple rearrangements induced in the wheat genome that resulted in poor plant vigor and seed set, low transmission, and an underestimation of the frequency of wheat–rye dicentric chromosomes. Genomic in-situ hybridization (GISH) analysis of the 33 recovered rye deficiencies revealed that 30 resulted from a single break in one chromosome arm followed by the loss of the segment distal to the breakpoint. Only three had a wheat segment attached distal to the breakpoint. Although some of the Gc-induced rye rearrangements were derived from BFB cycles, all of the recovered rye rearrangements were simple in structure. The healing of the broken chromosome ends was achieved either by the de-novo addition of telomeric repeats leading to deficiencies and telocentric chromosomes or by the fusion with other broken ends in the form of stable monocentric terminal translocation chromosomes.
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  • 72
    ISSN: 1573-9058
    Keywords: chlorophyll fluorescence ; diphenyl carbazide ; donor side ; electron transport ; MnCl2 ; NH2OH ; photosystem ; senescence ; thylakoid protein ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Changes in various components of photosynthetic apparatus during the 6-d dark incubation at 25 °C of detached control and DCMU-treated Triticum aestivum L. leaves were examined. The rate of photosystem 2 (PS2) activity was decreased with increase of the time of dark incubation in control leaves. In contrast to this, DCMU-treated leaves demonstrated high stability by slowing down the inactivation processes. Diphenyl carbazide and NH2OH restored the PS2 activity more in control leaves than in DCMU-treated leaves. Mn2+ failed to restore the PS2 activity in both control and DCMU-treated samples. Similar results were obtained when Fv/Fm was evaluated by chlorophyll fluorescence measurements. The marked loss of PS2 activity in dark incubated control leaves was primarily due to the loss of D1, 33, and 23 kDa extrinsic polypeptides and 28-25 kDa LHCP2 polypeptides.
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  • 73
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    Photosynthetica 37 (2000), S. 519-527 
    ISSN: 1573-9058
    Keywords: alanine ; aspartate ; glycine ; glycollate ; malate ; nitrate ; serine ; sugars ; Triticum aestivum ; urea ; wheat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract 14CO2 uptake in leaves of wheat plants (Triticum aestivum L.) fertilized by urea or Ca(NO3)2 (25 mol m-3) was investigated. The Warburg effect (inhibition of 14CO2 uptake by oxygen) under 0.03 vol. % CO2 concentration was observed only in non-fertilized plants. Under 0.03 vol. % CO2, the Warburg antieffect (stimulation of 14CO2 uptake by oxygen) was detected only in plants fertilized by Ca(NO3)2. Under saturating CO2 concentration (0.30 vol. %), the Warburg antieffect was observed in all variants. Under limitation of ribulose-1,5-bisphosphate carboxylase/oxygenase activity (0.30 vol. % CO2 + 1 vol. % O2), the rate of synthesis of glycollate metabolism products decreased in control and urea-fertilized plants but was enhanced in nitrate-fed plants. Hence, there was an activation of glycollate formation via transketolase reaction in fertilized plants, and the products of nitrate reduction function were oxidants in nitrate-fertilized plants whereas the superoxide radical played this role in urea-fertilized plants.
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  • 74
    ISSN: 1573-9058
    Keywords: net photosynthetic rate ; soil and atmospheric drought ; stomatal conductance ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Yields of wheat in semiarid and arid zones are limited by drought, and water condition is very important at each stage of development. Studies carried out at Loess Plateau in the northwestern part of China indicated that yield of spring wheat (Triticum aestivum L.) cv. Dingxi 81-392 was reduced by 41% when subjected to water stress. The effects of two water regimens on net photosynthetic rate (P N), stomatal conductance (g s), and intercellular CO2 concentration (C i) were investigated at the jointing, booting, anthesis, and grain filling stages. Low soil moisture in comparison to adequate one had invariably reduced P N during the diurnal variations at the four growth stages. P N and g s in both soil moisture regimes was maximally reduced at midday. C i and the stomatal limitation fluctuated remarkably during photosynthesis midday depression processes, especially at the grain filling stage. Hence atmospheric drought at midday was one of the direct causes inducing stomata closure and the g s depression, but it was beneficial for maintaining stable intrinsic water use efficiency. Fluctuation in C i implicated that non-stomatal limitation also plays an important role during the period of photosynthesis midday depression. Consequently stomatal and/or non-stomatal limitation are the possible cause of the midday photosynthesis decline.
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  • 75
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    Photosynthetica 37 (2000), S. 615-619 
    ISSN: 1573-9058
    Keywords: carbon based secondary compounds (CBSC) ; isoorientin ; leaf age ; litter ; phenolics ; tricin ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract We compared flavonoids in green, mature, and senescing flag leaves of wheat grown under ambient (AC - 370 μmol mol-1) and elevated (EC - 550 μmol mol-1) concentrations of CO2 in a FACE (Free Air CO2 Enrichment) system. The concentrations of flag leaf flavonoids (e.g., isoorientin and tricin) decreased to one third in mature leaves, and the majoritary isoorientin almost disappeared in senescing leaves. Flavonoid concentrations increased in green well-developed flag leaves under EC (46 % isoorientin and 55 % tricin), whereas the differences disappeared in mature and senescing flag leaves. Predictions of changes in litter phenolic concentrations and their effects on decomposition rates under EC based on changes in green leaves need to be revised.
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  • 76
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    European journal of plant pathology 106 (2000), S. 837-842 
    ISSN: 1573-8469
    Keywords: Triticum aestivum ; Septoria nodorum ; Phaeosphaeria nodorum ; epidemiology
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The transmission of Stagonospora nodorum from four naturally infected winter wheat seedlots was quantified in controlled environment germination chambers at 9, 13, 17, 21, and 25 °C. Seedlings were harvested when the second leaf began to emerge. Coleoptiles and first seedling leaves were examined for the presence of lesions caused by S. nodorum. First leaves were incubated on Bannon's medium for 2 weeks, after which they were examined for pycnidia of S. nodorum. Transmission to the coleoptile occurred at all temperatures, but decreased from 100% to 72% as temperature increased from 9 to 25 °C. Transmission to the first leaf was less, dropping from 37% to 2% as temperature increased from 9 to 25 °C. At least 44% of infected first leaves were symptomless at all temperatures, with 96% of infected leaves showing no symptoms at 25 °C. Transmission to seedling leaves occurred over a broad temperature range. Under the high densities at which wheat is sown, a significant number of infected seedlings per unit area may originate from relatively low initial seed infection levels and transmission efficiencies.
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  • 77
    ISSN: 1573-8264
    Keywords: carboxylation efficiecy ; carotenoids ; chlorophyll ; growth analysis ; net photosynthetic rate ; photochemical efficiency ; ribulose 1,5-bisphosphate carboxylase/oxygenase ; stomatal conductance ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Wheat plants were grown from sowing to day 18 in 26-dm3 chambers at three different CO2 concentrations: 150 (-CO2), 350 (C, control), 800 (+CO2) μmol mol-1. Afterwards, plants of the three variants were grown at the same natural CO2 concentration. Plant characteristics were measured just before the transfer (0 days after CO2 treatment, DAT), and at 5 – 8 DAT on the 1st leaf, and at 12 – 22 DAT on the 4th leaf. Decreased or increased CO2 concentrations caused acclimations which persisted after transplantation to natural CO2 concentration. At 5 – 8 DAT, stomatal density, stomatal conductance (gs), CO2 saturated net photosynthetic rate (PNsat0), radiation saturated net photosynthetic rate (PNsat1), and carboxylation efficiency (τ) were higher in -CO2 plants and lower in +CO2 plants than in C plants. As compared with C plants, the photochemical efficiency (α) was lower in -CO2 and higher in -CO2 plants, however, chlorophyll (Chl) a, Chl b, Chl a–b and carotenoid contents were lower in both -CO2 and +CO2 plants. On the 4th leaf, which emerged on plant after finishing CO2 treatments, at 12 – 22 DAT, no differences in stomatal density and g, between treatments were observed. In -CO2 plants, pigment content and PNsat0 were higher, α was lower, and PNsat1 and τ were not different from C plants. In contrast, in +CO2 plants, pigment content, PNsat1 and τ were lower, and PNsat0 and α were unchanged. Leaf area, dry mass, and tiller development increased in +CO2 plants and decreased in -CO2 plants. In the interval between 8 and 22 DAT, lower net assimilation rate in +CO2 than in -CO2 plants was observed.
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  • 78
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    Biologia plantarum 43 (2000), S. 523-528 
    ISSN: 1573-8264
    Keywords: accumulation ; grains ; lithium ; mobility ; phloem ; potassium ; rubidium ; sodium ; strontium ; Triticum aestivum ; xylem
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The alkali metals cesium, rubidium, lithium and sodium were introduced together with strontium via flaps into leaf laminas or into the stem of maturing, intact winter wheat (Triticum aestivum L. cv. Arina) grown in a field. Long-distance transport of these elements and the influence of the application date and of different application positions were investigated. The phloem-immobile Sr served as a marker for the distribution of the xylem sap in the plants. Dry matter accumulation in the grains and the transpiration per shoot were not markedly affected by the treatments as compared to control plants. The phloem mobility was rather high for Cs and Rb. Li was almost immobile in the phloem (similarly to Sr). An application into the cut stem xylem below the second leaf node contributed more to the contents in the grains than an application into the flag leaf. An earlier feeding date led to a higher accumulation in the grains. The marked losses of the elements applied during maturation (most pronounced for Li) can be explained by leakage in the rain.
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  • 79
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    Biologia plantarum 43 (2000), S. 61-66 
    ISSN: 1573-8264
    Keywords: lipids ; polypeptide pattern ; salt stress ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Wheat seedlings of a salt tolerant cultivar were grown hydroponically in presence and absence of 100 mM NaCl. Roots were harvested, and the plasma membrane (PM) fraction was purified. PM ATPase required a divalent cations for activity (Mg 〉 Mn 〉 Ca 〉 Co 〉 Zn 〉 Ni 〉 Cu), and it was further stimulated by monovalent cations (K 〉 Rb 〉 NH4 〉 Li 〉 choline 〉 Cs). The pH optima were 6.0 and 5.6 in absence and presence of 25 mM KCl, respectively. The enzyme was sensitive to vanadate and DCCD but insensitive to azide, oligomycine and nitrate. The enzyme displayed a high preference for ATP but was also able to hydrolyze other nucleotide tri- and diphosphates. The enzyme activity showed a simple Michaelis-Menten kinetics for the substrate Mg2+-ATP in both control and salt exposed roots. The polypeptide patterns of control and salt stressed PM fractions, detected by SDS-PAGE, were very similar. NaCl substantially reduced the PM ATPase specific activity, whereas it had little effect on the apparent Km for Mg2+-ATP. Since the root PM ATPase of salt sensitive and resistant genotypes responded similarly to salinity stress, it seems unlikely that the mechanism of salt tolerance in wheat is primarily based on differences in PM ATPase characteristics.
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  • 80
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    Biologia plantarum 43 (2000), S. 309-311 
    ISSN: 1573-8264
    Keywords: grains ; maturation ; radioisotopes ; transport ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Steam-girdling experiments with detached wheat shoots showed that cesium was eliminated from the xylem sap and loaded into the phloem during acropetal transport. This transfer is important for the accumulation of cesium (especially also of the radiopollutants 134Cs and 137Cs) in maturing wheat grains.
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  • 81
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    Biologia plantarum 43 (2000), S. 559-562 
    ISSN: 1573-8264
    Keywords: phenolics ; susceptibility ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Polyphenol oxidase activity was higher in resistant wheat cultivar ACC-8226 than in susceptible cultivar MP-845 in control sets and after inoculation of Alternaria triticina. However, similar polyphenol oxidase isozyme pattern was found in control and inoculated sets of both the cultivars, but the band intensity was higher after inoculation. Three and four peroxidase isozymes were found in ACC-8226 and MP-845, respectively. An extra peroxidase isozyme band was observed in both the cultivars after inoculation. The results suggest an active role of peroxidase and polyphenol oxidase in defence mechanism of wheat plants.
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  • 82
    ISSN: 1573-8264
    Keywords: ascorbic acid ; ascorbate peroxidase ; active oxygen species ; catalase ; hydroger ; peroxide ; oxidative stress ; superoxide dismutase ; temperature stress ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract An experiment was conducted with three wheat (Triticum aestivum L.) genotypes C 306, HD 2285 and HD 2329 (differently susceptible to water and temperature stress) to study the extent of oxidative injury and activities of antioxidant enzymes in relation to heat stress induced by manipulating dates of sowing. Increase in temperature by late sowing significantly decreased leaf relative water content (RWC), ascorbic acid content, and increased H2O2 content and lipid peroxidation in all the genotypes at 8 and 23 d after anthesis. Temperature tolerant genotypes C 306, closely followed by HD 2285 were superior to HD 2329 in maintaining high RWC, ascorbic acid content, and lower H2O2 content and lipid peroxidation (malondialdehyde content) under high temperature (late sowing) at the two stages. Activities of superoxide dismutase and catalase were highest in HD 2285 followed by C 306 and minimum in HD 2329 while ascorbate peroxidase activity was highest in C 306.
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  • 83
    ISSN: 1573-8264
    Keywords: active oxygen species ; catalase ; chloroplast ; glutathione reductase ; lipid peroxidation ; nitrate reductase ; proline ; superoxide dismutase ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract We induced an oxidative stress by means of exogenous hydrogen peroxide in two wheat genotypes, C 306 (tolerant to water stress) and Hira (susceptible to water stress), and investigated oxidative injury and changes in antioxidant enzymes activity. H2O2 treatment caused chlorophyll degradation, lipid peroxidation, decreased membrane stability and activity of nitrate reductase. Hydrogen peroxide increased the activity of antioxidant enzymes, glutathione reductase and catalase. These effects increased with increasing H2O2 concentrations. However, no change was observed in the activity of superoxide dismutase and proline accumulation.
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  • 84
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    Biologia plantarum 43 (2000), S. 257-262 
    ISSN: 1573-8264
    Keywords: nitrate assimilation ; Triticum aestivum ; Zn toxicity ; Cu toxicity
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The effect of Zn2- on nitrate reductase (NR, EC 1.6.6.1) activity was studied in botá wheat (Triticum aestivum cv. Oasis) leaves and in the NR enzyme partially purified from wheat leaves. Leaf segments were floated on 0 to 5 mM ZnSO4 solutions (pH 6.0) for 24 h under continuous light. Zn2- at 250 μM decreased NR activity and increased membrane permeability. However, parameters of cellular oxidative damage were scarcely affected by Zn2- treatments. Accordingly, the decrease of NR activity induced by Zn2- was not prevented by benzoate (a scavenger of oxygen radicals). The effect of Zn2- was dependent on leaf age: it decreased NR activity in mature but not in young leaves. Zn2 inhibited the partially purified NR. This inhibition was not reversed by either co- or post-incubation with cysteine, and the amount of -SH groups of the purified NR was not affected by Zn2+ indicating that Zn2- inhibition does not involve key -SH groups of the enzyme. However, o-phenantroline both prevented and reversed Zn2+-induced NR inhibition. We concluded that the effect of Zn2+ on NR activity in vivo is not associated with an increase in active oxygen generation and involves a direct and reversible inhibition of the enzyme.
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  • 85
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    Entomologia experimentalis et applicata 91 (1999), S. 403-412 
    ISSN: 1570-7458
    Keywords: aphid ; Diuraphis noxia ; Triticum aestivum ; endosymbiont ; insect-plant interactions ; phloem ; amino acids
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The feeding behavior of Diuraphis noxia Mordvilko (Homoptera: Aphididae) on susceptible hosts causes both ultrastructural and tissue level damage which may affect phloem composition. Genetic evidence suggests that endosymbiotic bacteria in most aphids overproduce limiting amino acids to benefit hosts but that D. noxia depends less on endosymbionts for these nutrients, possibly due to an enriched diet. To determine whether D. noxia feeding damage results in higher concentrations of essential amino acids, stylet exudates were analyzed from wheat (Triticum aestivum) damaged to different degrees. Comparison of samples from undamaged and damaged susceptible wheat revealed changes in amino acid composition and an increase in levels of essential amino acids, indicating a nutritionally enhanced ingesta. The changes in stylet exudates paralleled changes in leaf exudates, indicating that the effects are systemic. Feeding damage is not observed on a resistant wheat host, var. Halt, and leaf exudates from infested Halt did not show changes in amino acid composition. Mean relative growth of nymphs was significantly lower on Halt than on susceptible Arapahoe, indicating that Halt is a less suitable host. Both varieties show similar amino acid levels in non-infested samples, suggesting that D. noxia infestation does not enhance the phloem environment in Halt. This study provides evidence that aphid feeding can generate a nutritionally enhanced phloem diet.
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  • 86
    ISSN: 1570-7458
    Keywords: sieve element ; salivation ; aphid ; plant resistance ; wheat ; Sitobion fragariae ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Extended sieve element salivation (E1 waveform in the electrical penetration graph) is a characteristic activity during early sieve element punctures, particularly in resistant plants. In order to explore a chemically-mediated mechanism of resistance associated with sieve element salivation, we compared the pattern of feeding behaviour of the aphid, Sitobion fragariae (Walker), on two cultivars of the wheat Triticum aestivum L., with different concentrations of hydroxamic acids (Hx). During 24 h of electronic monitoring, aphids dedicated over 50% of the total time to phloem ingestion from the sieve elements. Total time allocated to E1 in the experiment, time to first E1 within the experiment, time allocated to E1 before a sustained phloem ingestion (E2) and the contribution of sieve element salivation to the phloem phase (E1/[E1+E2]) were significantly higher in the high-Hx cultivar. The increased salivation in plants with higher contents of Hx suggests the existence, at least in this system, of a chemically-mediated sieve element constraint.
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  • 87
    ISSN: 1432-1890
    Keywords: Key words Glomus mosseae ; Hydroponics ; Nitrate uptake ; Root respiration ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Oxygen and CO2 fluxes were measured in hydroponically grown mycorrhizal and non-mycorrhizal Triticum aestivum L. cv. Hano roots. The NO3 – uptake of the plants was used to estimate the amount of root respiration attributable to ion uptake. Plants were grown at 4 mM N and 10 μM P, where a total and viable mycorrhizal root colonisation of 48% and 18%, respectively, by Glomus mosseae (Nicol. and Gerd.) Gerd. and Trappe (BEG 107) was observed. The O2 consumption and NO3 – uptake rates were similar and the CO2 release was higher in mycorrhizal than in non-mycorrhizal wheat. This resulted in a significantly higher respiratory quotient (RQ, mol CO2 mol–1 O2) in mycorrhizal (1.27±0.13) than in non-mycorrhizal (0.79±0.05) wheat. As the biomass and N and P concentrations in mycorrhizal and non-mycorrhizal wheat were the same, the higher RQ resulted from the mycorrhizal colonisation and not differences in nutrition per se.
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  • 88
    ISSN: 1432-0789
    Keywords: Key words Soil tillage ; Rhizosphere microorganisms ; Cereals ; Nitrogen fixation ; Gaeumanomyces graminis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract  In long-term field experiments on sandy loam and loamy sand soils, the influence of conservation and conventional tillage on soil and rhizosphere microorganisms was studied. Conservation tillage stimulated rhizosphere bacteria on winter wheat, winter barley, winter rye and maize in different soil layers. Particularly the populations of Agrobacterium spp. and Pseudomonas spp. were increased. On the sandy loam, N2 fixation and nodulation of pea plants were significantly increased. No influence of different soil tillage was determined on the colonization of the rhizosphere by mycorrhiza and saprophytic fungi. Stubble residues infected with Gaeumanomyces graminis were infectious for a longer time on the soil surface than after incorporation into the soil.
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  • 89
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    Biology and fertility of soils 29 (1999), S. 141-145 
    ISSN: 1432-0789
    Keywords: Key words Blue-green algae ; Nitrogen fixation ; Rice ecosystem ; Zooplankton ; Benthos
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract  As part of an integrated pest management project to study the role blue-green algae (BGA) may play in the food web of rice-field ecosystems, 14C-labelled filamentous and monocellular BGA were used as food for fish, zooplankton and benthic fauna in artificial rice fields in the form of three aquaria. 14C present in the organisms was then traced by liquid scintillation to follow the manner in which the labelled BGA were consumed by different organisms. In this study the grazing rate of fish (mud carp) was compared to that of benthic organisms and zooplankton. It was found that fish consumed the BGA at the fastest rates and in the largest amounts, followed by the benthic species and zooplankton. It was also found that filamentous BGA were consumed in higher amounts than monocellular BGA. The importance of grazing in nutrient recycling is emphasized.
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  • 90
    ISSN: 1432-0789
    Keywords: Key words Phosphate-solubilizing microorganisms ; Mussoorie rock phosphate ; Vesicular-arbuscular mycorrhizae ; Triticum aestivum ; Nutrient-deficient soils
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract  The effect of inoculating wheat (Triticum aestivum L.) with the PO4 3–-solubilizing microorganisms (PSM) Bacillus circulans and Cladosporium herbarum and the vesicular-arbuscular mycorrhizal (VAM) fungus Glomus sp. 88 with or without Mussoorie rock phosphate (MRP) amendment in a nutrient-deficient natural sandy soil was studied. In the sandy soil of low fertility root colonization by VAM fungi was low. Inoculation with Glomus sp. 88 improved root colonization. At maturity, grain and straw yields as well as N and P uptake improved significantly following inoculation with PSM or the VAM fungus. These increases were higher on combined inoculation of PSM and the VAM fungus with MRP amendment. In general, a larger population of PSM was maintained in the rhizosphere of wheat in treatments with VAM fungal inoculation and MRP amendment. The results suggest that combined inoculation with PSM and a VAM fungus along with MRP amendment can improve crop yields in nutrient-deficient soils.
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  • 91
    ISSN: 1432-0789
    Keywords: Key words Red alder ; White clover ; Nitrogenase activity ; Acetylene reduction assay ; Nitrogen fixation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract  Simultaneous measurements were made to assess the diurnal and seasonal patterns of nitrogenase activity of red alder (Alnus rubra Bong.) and white clover (Trifolium repens L.) growing together in a silvopastoral agroforestry system using the acetylene reduction assay. Diurnal measurements were made in the summer and autumn at 3-h intervals whereas seasonal nitrogenase activity was assessed based on observations made at midday in July, September and January to represent the summer, autumn and winter seasons, respectively. No obvious diurnal patterns of nitrogenase activity were found in either red alder or white clover in summer and no significant variations in nitrogenase activity were observed between day and night. However, in autumn, pronounced diurnal patterns were observed in both species. Significantly higher rates of nitrogenase activity per unit dry weigh (dwt) of nodules were detected at 1500 hours in red alder, whereas, in white clover, significantly higher rates were obtained at 2100 hours. There was no significant correlation between diurnal nitrogenase activity and air temperature, photosynthetically active radiation and soil temperature at 10 cm depth in either red alder or white clover. Seasonal rates of nitrogenase activity showed significantly higher activity in summer, which subsequently decreased in autumn, to reach very low levels in the winter. The rates of nitrogenase activity of white clover were consistently higher than those of red alder both diurnally and seasonally. In the three seasons sampled, the average nitrogenase activity for white clover was 66.42 μmol C2H4 g dwt–1 h–1, which was 3.5 times higher than the 18.67 μmol C2H4 g dwt–1 h–1 obtained for red alder.
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  • 92
    ISSN: 1432-0789
    Keywords: Key words Arbuscular mycorrhiza ; Collembola ; Nitrogen fertilization ; Nitrogen fixation ; Soil aggregation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract  The effect of the form of N nutrition on soil stability is an important consideration for the management of sustainable agricultural systems. We grew soybean [Glycine max (L.) Merr.] plants in pot cultures in unsterilized soil, and treated them by (1) inoculating them with Bradyrhizobium japonicum, fertilizing with (2) nitrate or (3) ammonia, or (4) by providing only minimum N amendment for the controls. The soils were sampled at 3-week intervals to determine changes in water-stable soil aggregates (WSA), soil pH, the development of roots, arbuscular mycorrhizal (AM) soil and root colonization, and selected functional groups of soil bacteria. The soil fauna was assayed at the end of the experiment (9 weeks). WSA was correlated positively with root and AM soil mycelium development, but negatively with total bacterial counts. Soil arthropod (Collembola) numbers were negatively correlated with AM hyphal length. Soils of nodulated and ammonia-fertilized plants had the highest levels of WSA and the lowest pH at week 9. Sparse root development in the soils of the N-deficient, control plants indicated that WSA formation was primarily influenced by AM hyphae. The ratio of bacterial counts in the water-stable versus water-unstable soil fractions increased for the first 6 weeks and then declined, while counts of anaerobic bacteria increased with increasing WSA. The numbers of soil invertebrates (nematodes) and protozoans did not correlate with bacterial counts or AM soil-hyphal lengths. Soil pH did not affect mycorrhiza development, but actinomycete counts declined with decreasing soil pH. AM fungi and roots interacted as the factors that affect soil aggregation, regardless of N nutrition.
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  • 93
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    Nutrient cycling in agroecosystems 53 (1999), S. 157-175 
    ISSN: 1573-0867
    Keywords: Brassica napus ; Cicer arietinum ; current P ; Lens culinaris ; Lupinus albus ; Lupinus angustifolius ; P concentration response ; P content response ; Pisum sativum ; previous P ; sigmoid response ; single superphosphate ; Triticum aestivum ; Vicia faba ; yield response
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Phosphorus (P) is a major deficiency of soils of south-western Australia (WA). The fertilizer P requirements are not known for grain legumes being evaluated for neutral to alkaline, fine textured soils in WA. To rectify this, glasshouse and field experiments were undertaken to compare the responses of several grain legume species, wheat and canola to applications of single superphosphate and the results are reported in this paper. The glasshouse experiments measured responses of dried tops, harvested at 26 to 42 days after sowing, to P that was freshly-applied (current P) and previously-applied (previous P). Responses in the glasshouse were measured using yield, P concentration and P content (P concentration multiplied by yield) of oven dried tops of the following: wheat (Triticum aestivum), canola (Brassica napus), faba bean (Vicia faba), chickpea (Cicer arietinum), lentil (Lens culinaris), field pea (Pisum sativum), albus lupin (Lupinus albus) and narrow leaf lupin (Lupinus angustifolius). Field experiments in 1994 and 1995 compared seed (grain) yield responses of faba bean, chickpea, lentil, albus lupin and wheat to applications of current P. The P was banded (drilled) with the seed while sowing at 5 cm depth. Canola and wheat produced very large yield responses to increasing applications of current P. Responses were much smaller for albus lupin, faba bean and chickpea. Responses for lentil, narrow leaf lupin and field pea, fell in between responses of the small and large seeded species. Similar trends for responses were obtained as measured using yield, P concentration, or P content. For soils treated with previous P, similar trends were observed as for current P, but differences in yield responses between species were much less marked and the response curves tended to become more sigmoid. In the field experiments, grain yield responses to current P of albus lupin and chickpea were less than that for wheat. Relative to wheat, faba bean was the most responsive grain legume to applications of current P, with lentil producing similar responses to wheat in one experiment at a newly cleared, P deficient site.
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  • 94
    ISSN: 1432-072X
    Keywords: Key words Cpn60 ; groESL ; Heat shock protein ; Hsp60 ; NifA ; Nitrogen fixation ; Symbiosis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract At least five highly conserved, but disparately regulated groESL operons are present in Bradyrhizobium japonicum. Expression of groESL 3 is coregulated with symbiotic nitrogen fixation genes, implying a role of GroESL chaperonins in the nitrogen fixation process. Null mutants of individual groEL genes, however, were not impaired in symbiotic nitrogen fixation activity. By contrast, the groEL 3-plus-groEL 4 double mutant strain D4, which is mutated in those groEL genes that contribute most to the GroEL pool under symbiotic conditions, exhibited less than 5% Fix activity as compared to the wild-type. Expression of lacZ fusions made to several representative nif and fix genes was not, or only marginally, reduced in mutant D4, indicating that the requirement of chaperonins for nitrogen fixation does not occur at the level of RegSR-NifA-σ54- or FixLJ-FixK2-dependent gene regulation. Instead, immunoblot analyses revealed that the level of NifH and NifDK nitrogenase proteins was drastically decreased in extracts prepared from D4 bacteroids and from free-living cells grown anaerobically. Transcriptional fusions of the anaerobically induced groESL 3 promoter (P3) to all five B. japonicum groESL operons and also to groESL from Escherichia coli were integrated into the chromosome of mutant D4. Strains harboring P3 fused to groESL 1, groESL 2, groESL 5, or E. coli groESL partially complemented the symbiotic defect of mutant D4, whereas the wild-type phenotype was completely restored in strains complemented with P3 fused to groESL 3 (control) or groESL 4. Likewise, the growth defect of an E. coli groEL mutant could be corrected at least partially by individual B. japonicum groESL operons. In conclusion, both series of complementation analyses were not indicative of a strict substrate specificity of any of the B. japonicum groESL gene products, which is in good agreement with their high degree of sequence conservation.
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  • 95
    ISSN: 1432-1327
    Keywords: Key words Iron-sulfur ; Nitrogen fixation ; Evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Abstract  The [2Fe-2S] protein from Azotobacter vinelandii that was previously known as iron-sulfur protein I, or Shethna protein I, has been shown to be encoded by a gene belonging to the major nif gene cluster. Overexpression of this gene in Escherichia coli yielded a dimeric protein of which each subunit comprises 106 residues and contains one [2Fe-2S] cluster. The sequence of this protein is very similar to that of the [2Fe-2S] ferredoxin from Clostridium pasteurianum (2FeCpFd), and the four cysteine ligands of the [2Fe-2S] cluster occur in the same positions. The A. vinelandii protein differs from the C. pasteurianum one by the absence of the N-terminal methionine, the presence of a five-residue C-terminal extension, and a lesser number of acidic and polar residues. The UV-visible absorption and EPR spectra, as well as the redox potentials of the two proteins, are nearly identical. These data show that the A. vinelandii FeS protein I, which is therefore proposed to be designated 2FeAvFdI, is the counterpart of the [2Fe-2S] ferredoxin from C. pasteurianum. The occurrence of the 2FeAvFdI-encoding gene in the nif gene cluster, together with the previous demonstration of a specific interaction between the 2FeCpFd and the nitrogenase MoFe protein, suggest that both proteins might be involved in nitrogen fixation, with possibly similar roles.
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  • 96
    ISSN: 1432-2048
    Keywords: Key words: ATPase ; Glycine max ; Nitrogen fixation ; Symbiosome
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract. The localization of H+-ATPases in soybean (Glycine max L. cv. Stevens) nodules was investigated using antibodies against both P-type and V-type enzymes. Immunoblots of peribacteroid membrane (PBM) proteins using antibodies against tobacco and Arabidopsis H+-ATPases detected a single immunoreactive band at approximately 100 kDa. These antibodies recognized a protein of similar relative molecular mass in the crude microsomal fraction from soybean nodules and uninoculated roots. The amount of this protein was greater in PBM from mature nodules than in younger nodules. Immunolocalization of P-type ATPases using silver enhancement of colloidal-gold labelling at the light-microscopy level showed signal distributed around the periphery of non-infected cells in both the nodule cortex and nodule parenchyma. In the central nitrogen-fixing zone of the nodule, staining was present in both the infected and uninfected cells. Examination of nodule sections using confocal microscopy and fluorescence staining showed an immunofluorescent signal clearly visible around the periphery of individual symbiosomes which appeared as vesicles distributed throughout the infected cells of the central zone. Electron-microscopic examination of immunogold-labelled sections shows that P-type ATPase antigens were present on the PBM of both newly formed, single-bacteroid symbiosomes just released from infection threads, and on the PBM of mature symbiosomes containing two to four bacteroids. Immunogold labelling using antibody against the B-subunit of V-type ATPase from oat failed to detect this protein on symbiosome membranes. Only a very faint signal with this antibody was detected on Western blots of purified PBM. During nodule development, fusion of small symbiosomes to form larger ones containing multiple bacteroids was observed. Fusion was preceded by the formation of cone-like extensions of the PBM, allowing the membrane to make contact with the adjoining membrane of another symbiosome. We conclude that the major H+-ATPase on the PBM of soybean is a P-type enzyme with homology to other such enzymes in plants. In vivo, this enzyme is likely to play a critical role in the regulation of nutrient exchange between legume and bacteroids.
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  • 97
    ISSN: 1432-1890
    Keywords: Key words Arbuscular mycorrhiza ; Hordeum vulgare ; Triticum aestivum ; Glomus intraradices ; Mycorrhiza-helper bacteria ; Secondary compounds
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Colonization of Hordeum vulgare L. cv. Salome (barley)and Triticum aestivum L. cv. Caprimus (wheat) roots by the arbuscular mycorrhizal fungus Glomus intraradices Schenck & Smith leads to de novo synthesis of isoprenoid cyclohexenone derivatives with blumenin [9-O-(2′-O-β-glucuronosyl)-β-glucopyranoside of 6-(3-hydroxybutyl)-1,1,5-trimethyl-4-cyclohexen-3-one] as the major constituent and to transient accumulation of hydroxycinnamate amides (4-coumaroylagmatine and -putrescine). Accumulation of these compounds in mycorrhizal wheat roots started 2 weeks after sowing together with the onset of arbuscule formation and proceeded with mycorrhizal progression. Highest levels were reached in 3- to 4-week-old secondary roots (root branches of first and higher order) characterized by the formation of vesicles. In the final developmental stages, the fungus produced massive amounts of spores, enclosing the stele of older root parts (older than 5 weeks) characterized by cortical death. In these root parts, the secondary compounds were detected in trace amounts only, indicating that they were located in the cortical tissues. Some rhizosphere bacteria tested, i.e. Agrobacterium rhizogenes, Pseudomonas fluorescens, and Rhizobium leguminosarum, markedly stimulated both fungal root colonization and blumenin accumulation, thus, acting as mycorrhiza-helper bacteria (MHB). Application of blumenin itself strongly inhibited fungal colonization and arbuscule formation at early stages of mycorrhiza development. This was associated with a markedly reduced accumulation of the hydroxycinnamate amides 4-coumaroylputrescine and -agmatine. The results suggest that both the isoprenoid and the phenylpropanoid metabolism are closely linked to the developmental stage and the extent of fungal colonization. Their possible involvement in the regulation of mycorrhiza development is discussed.
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  • 98
    Electronic Resource
    Electronic Resource
    Springer
    Theoretical and applied genetics 98 (1999), S. 472-477 
    ISSN: 1432-2242
    Keywords: Key words QTL ; Ear emergence time ; Plant height ; Recombinant substitution line ; Triticum aestivum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Chromosome 5A of wheat carries major gene loci for agronomic traits including the vernalization requirement (Vrn-A1) and ear morphology (Q). To determine whether the genetic variation for ear emergence time and plant height is attributable to either of these major genes as pleiotropic effects or independent QTL, we combined a RFLP map constructed from 120 recombinant substitution lines derived from a cross between ‘Chinese Spring’ (Cappelle-Desprez 5A) and CS(Triticum spelta 5A) with data collected from field trials over 3 years. For ear emergence time the main effects on flowering time were by Vrn-A1 and QEet.ocs-5A.1, the latter a QTL in the 28.6-cM Xcdo584/Q interval linked to Q by less than 10 cM. The CS(T. spelta 5A) allele at QEet.ocs-5A.1 contributed to an earlier ear emergence time by 2.7–6.0 days, which was approximately equal to the effects of Vrn-A1. For plant height, three QTLs were identified on the long arm and linked in repulsion. The CS(T. spelta 5A) allele at Vrn-A1 or closely linked to Xfba068 contributed to a height reduction of 3.5–6.1 cm, whereas both the Q allele and Qt.ocs-5A.1 allele within the Xcdo1088/Xbcd9 interval from CS(Cappelle-Desprez 5A) produced a shorter plant. When plant height was partitioned into culm length and ear length, the Vrn-A1 allele and CS(Cappelle-Desprez 5A) allele at QCl.ocs-5A.1 within the Xcd1088/Xbcd9 interval were found to contribute to a shorter culm. CS(T. spelta 5A) allele at q was a major determinant of a long ear, together with minor effects at QEl.ocs-5A.1 within the Xcdo1088/Xbcd9 interval.
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  • 99
    ISSN: 1432-2242
    Keywords: Key words Erysiphe graminis ; Powdery mildew resistance ; QTL ; Triticum aestivum ; Triticum spelta
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Powdery mildew is one of the major diseases of wheat in regions with a maritime or semi-continental climate and can strongly affect grain yield. The attempt to control powdery mildew with major resistance genes (Pm genes) has not provided a durable resistance. Breeding for quantitative resistance to powdery mildew is more promising, but is difficult to select on a phenotypic basis. In this study, we mapped and characterised quantitative trait loci (QTLs) for adult-plant powdery mildew resistance in a segregating population of 226 recombinant inbred lines derived from the cross of the Swiss wheat variety Forno with the Swiss spelt variety Oberkulmer. Forno possibly contains the Pm5 gene and showed good adult-plant resistance in the field. Oberkulmer does not have any known Pm gene and showed a moderate susceptible reaction. Powdery mildew resistance was assessed in field trials at two locations in 1995 and at three locations in 1996. The high heritability (h2=0.97) for powdery mildew resistance suggests that the environmental influence did not affect the resistance phenotype to a great extent. QTL analysis was based on a genetic map containing 182 loci with 23 linkage groups (2469 cM). With the method of composite interval mapping 18 QTLs for powdery mildew resistance were detected, explaining 77% of the phenotypic variance in a simultaneous fit. Two QTLs with major effects were consistent over all five environments. One of them corresponds to the Pm5 locus derived from Forno on chromosome 7B. The other QTL on 5A, was derived from the spelt variety Oberkulmer and did not correspond to any known Pm gene. In addition, five QTLs were consistent over three environments, and six QTLs over two environments. The QTL at the Pm5 locus showed a large effect, although virulent races for Pm5 were present in the mixture of isolates. Molecular markers linked with QTLs for adult-plant resistance offer the possibility of simultaneous marker-assisted selection for major and minor genes.
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  • 100
    ISSN: 1432-2242
    Keywords: Key words Aegilops tauschii ; Triticum aestivum ; Genetic mapping ; Molecular markers ; Agronomically important genes
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Aegilops tauschii is the diploid D-genome progenitor of bread wheat (Triticum aestivum L. em Thell, 2n=6x=42, AABBDD). A genetic linkage map of the Ae. tauschii genome was constructed, composed of 546 loci. One hundred and thirty two loci (24%) gave distorted segregation ratios. Sixty nine probes (13%) detected multiple copies in the genome. One hundred and twenty three of the 157 markers shared between the Ae. tauschii genetic and T. aestivum physical maps were colinear. The discrepancy in the order of five markers on the Ae. tauschii 3DS genetic map versus the T. aestivum 3D physical map indicated a possible inversion. Further work is needed to verify the discrepancies in the order of markers on the 4D, 5D and 7D Ae. tauschii genetic maps versus the physical and genetic maps of T. aestivum. Using common markers, 164 agronomically important genes were assigned to specific regions on Ae. tauschii linkage, and T. aestivum physical, maps. This information may be useful for map-based cloning and marker-assisted plant breeding.
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