ALBERT

Description: Food supply is one of the main factors driving cold-water corals (CWC) distribution, which often concentrate on ridges where local near-bed turbulence/strong currents enhance food availability. However, efficiency in food capture is strongly dependent on current velocity. Moreover, seawater temperature may also affect feeding success, since polyp contraction or nematocyst function could be slower at temperatures below the natural thermal range of a species. The non-reef forming CWC Dendrophyllia cornigera occurs in areas at temperatures from 11 to 17 °C, but is apparently absent from most CWC reefs at temperatures constantly below 11 °C. This study thus aimed to assess if a reduction in feeding capacity may contribute to understand the absence of this CWC from strictly cold environments. The efficiency of D. cornigera to capture meso- and macrozooplankton was assessed under different flow speeds (2, 5 and 10 cm s − 1) and temperatures (8, 12, and 16 °C). Flow speeds did not significantly affect the capture of mesozooplankton, whereas capture of macrozooplankton was significantly enhanced with increasing flow speed. Both meso- and macrozooplankton captures were not significantly affected by temperature in D. cornigera. Overall, this CWC species is efficient in capturing zooplankton under a larger range of flow velocities than the widespread CWC Lophelia pertusa, whose capture efficiency significantly decreased from low to high flow speeds. Even if temperature does not directly affect the capture rates of D. cornigera, it may still influence the feeding capacity of this CWC since the capture rates at 8 °C were always in the lowest range of the observed values at each flow speed, and corals maintained at 8 °C required a much longer time to fully expand their polyps once they were placed in the incubation chambers, than corals maintained at 12 and 16 °C.

Description: Submarine groundwater discharge (SGD) is an important component of chemical fluxes in the coastal ocean. The composition of SGD is influenced by biogeochemical reactions that take place within the subterranean estuary (STE), the subsurface mixing zone of fresh and saline groundwaters. The STE is characterized by redox gradients that affect the speciation and mobility of redox-sensitive elements (RSEs). We examined the distributions and behavior of the RSEs Mo, U, V, and Cr within the larger redox framework of a shallow STE and evaluated the source-sink function of the STE for these elements. We found that the advection of water through the STE and the apparent respiration of organic matter drives the formation of a “classic” redox sequence typically observed in diffusion-dominated fine-grained sediments. High concentrations of dissolved organic matter (up to 2.9 mM) lead to extensive sulfide production (up to 1.8 mM) within 3 m of the surface. Both Mo and U are quantitatively removed as oxic surface waters mix into ferruginous and sulfidic zones. Molybdenum removal appears to occur where sulfide concentrations exceed ~ 11 μM, a previously reported threshold for quantitative formation of highly particle-reactive thiomolybdate species. Uranium removal apparently occurs via reduction and formation of insoluble phases or sorption to sediments. It is not clear how readily sequestered metals may be returned to solution, but SGD may be an important sink in the marine budget for both Mo and U. In contrast, both V and Cr show non-conservative addition across the salinity mixing gradient. Increases in pH appear to promote dissolution of V from minerals within the shallow aquifer, and mobilization may also be associated with dissolved organic matter. Chromium enrichment is associated with higher dissolved organic matter and is likely due to the formation of soluble Cr-organic complexes. Fluxes of these elements were constrained using SGD volume fluxes, determined using radium isotopes as well as direct discharge measurements by Lee-type seepage meters, and concentrations in directly-sampled seepage (Mo: − 0.21 to − 7.7 μmol m− 2 day− 1; U: − 0.02 to − 0.6 μmol m− 2 day− 1; V: 0.05 to 2.0 μmol m− 2 day− 1; Cr: 0.12 to 4.4 μmol m− 2 day− 1).

Description: The Neoarchean-Paleoproterozoic Transvaal Supergroup in South Africa contains the well-preserved stromatolitic Campbellrand-Malmani carbonate platform, which was deposited in shallow seawater shortly before the 2.40–2.32 Ga Great Oxidation Event (GOE). This platform is composed of alternating stromatolitic carbonates and mudstones and is a prominent candidate for (isotope-) geochemical mapping to investigate the appearance of very small amounts of free oxygen that accumulated in shallow waters preceding the GOE. Mo isotopes in sedimentary archives are widely used as a proxy for redox-changes in modern and ancient environments and recent evidence suggests that oxy-molybdate (MoO42−) is directly transferred from ocean water to inorganic carbonates with negligible fractionation, thus reflecting oceanic Mo isotope signatures. In this study we analyzed major and trace element compositions as well as Mo isotopic compositions of carbonate and mudstone samples from the KMF-5 drill core. Geochemical indicators, such as Fe and Mn concentrations and Fe-to-Mn abundance ratios reveal the preservation of some geochemical indicators despite the widespread silicification and dolomitization of the platform. Heavy δ30Si values of silicified carbonates between 0.53 and 2.35‰ point to Si precipitation from surface water during early diagenesis rather than to a later hydrothermal overprint. This assessment is supported by the frequent observation of rip-up structures of silica (chert) layers within the entire sedimentary succession. The δ98Mo values of whole rock samples throughout the Malmani-Campbellrand platform range between −0.82 and +1.40‰, similar to values reported for deeper slope carbonates from the Griqualand West area, but variations are independent from lithology or depositional water depth. These large variations in δ98Mo values indicate molybdenum redox cycling and thus the presence of free oxygen in the atmosphere-ocean system at that time, in agreement with earlier Mo isotopic studies on Campbellrand carbonates and shales. A similar range in δ98Mo values for carbonates between +0.40 and +0.87‰, however, was also found on the hand specimen scale, indicating the danger of a sample bias on the Mo isotopic stratigraphy of this carbonate platform. Results of previously unpublished adsorption experiments of Mo on CaCO3 clearly indicate that the Mo inventory of Malmani-Campbellrand carbonates was not only influenced by primary adsorption from seawater, but to a much larger degree by secondary processes during early diagenesis, which also affected the Mo isotopic composition of the samples on a local scale. Our results indicate that Mo concentrations and isotopic compositions in ancient stromatolitic carbonates were subject to redox changes within microbial mats and within the soft sediment during early diagenesis and later lithification, and as such cannot be used to quantitatively reconstruct the amount of free atmospheric oxygen or its fluctuations through Earth's history. Nevertheless, we interpret our heavy Mo isotopic signatures from carbonates as a minimum value for Neoarchean seawater and reinforce the assumption that free atmospheric oxygen built up a heavy oceanic Mo reservoir at that time.

Description: The March 13th 1888 collapse of Ritter Island in Papua New Guinea is the largest known sector collapse of an island volcano in historical times. One single event removed most of the island and its western submarine flank, and produced a landslide deposit that extends at least 70 km from the headwall of the collapse scar. We have mapped and described the deposits of the debris avalanche left by the collapse using full-coverage multibeam bathymetry, side-scan sonar backscatter intensity mapping, chirp seismic-reflection profiles, TowCam photographs of the seafloor and samples from a single dredge. Applying concepts originally developed on the 1980 Mount St. Helens collapse landslide deposits, we find that the Ritter landslide deposits show three distinct morphological facies: large block debris avalanche, matrix-rich debris avalanche and distal debris flow facies. Restoring the island's land and submarine topography we obtained a volume of 4.2 km3 for the initial collapse, about 75% of which is now forming the large block facies at distances less than 12 km from the collapse scar. The matrix-rich facies volume is unknown, but large scale erosion of the marine sediment substrate yielded a minimum total volume of 6.4 km3 in the distal debris flow and/or turbidite deposits, highlighting the efficiency of substrate erosion during the later history of the landslide movement. Although studying submarine landslide deposits we can never have the same confidence that subaerial observations provide, our analysis shows that well-exposed submarine landslide deposits can be interpreted in a similar way to subaerial volcano collapse deposits, and that they can in turn be used to interpret older, incompletely exposed submarine landslide deposits. Studying the deposits from a facies perspective provides the basis for reconstructing the kinematics of a collapse event landslide; understanding the mechanisms involved in its movement and deposition; and so providing key inputs to tsunami models.

Description: The Mediterranean mid-littoral zone is inhabited by two sympatric chthamalid barnacles: Chthamalus stellatus and Euraphia depressa, C. stellatus extends from the high midtidal zone, above the algal belt, to the supra-littoral fringe, E. depressa is restricted to the uppermost intertidal levels in wave-beaten places and to cryptic habitats lower on the shore within the belt of C. stellatus. Previous studies have suggested that the reason for the fragmented distribution pattern of E. depressa is competitive displacement by the sympatric C. stellatus, following random settlement. This hypothesis is in agreement with the common model of zonation suggested by Connell that lower distribution limits are determined by biotic factors (competition and predation), while upper limits are set by physical factors. It is hard to test the validity of this model for this barnacle pair since the early ontogenetic stages of the species are morphologically indistinguishable, hindering our ability to understand distribution processes. Using 16S mtDNA as a genetic marker in a multiplex PCR system, cyprids and spats were individually identified. Settlement and recruitment rates were assessed using settlement plates, and the effect of post-settlement processes was tested with transplantation of settlers between zones. Results showed different strategies in each species: settlement of E. depressa was habitat-specific, while settlement of C. stellatus was random. Shifting individuals of C. stellatus to the high and cryptic zones resulted in high mortality; however, exposing juveniles of E. depressa that settled in artificially cryptic low shore habitat to C. stellatus presence had no effect on their survival. These finding do not agree with the formerly suggested hypothesis that zonation is mainly determined by post-settlement factors, and that the interspecies boundary is determined by interspecific competition, implying that competition model cannot be adapted to Mediterranean intertidal zonation and that other models, dominated by physical enforcement and pre-settlement recruitment-limiting factors, may prevail in this ecosystem.

Description: We present whole rock 187Os/188Os data for the most mafic lavas along the Lesser Antilles arc (MgO = 5–17 wt.%) and for the subducting basalt and sediments. 187Os/188Os ratios vary from 0.127 to 0.202 in the arc lavas. Inverse correlations between 187Os/188Os and Os concentrations and between 187Os/188Os and indices of differentiation such as MgO suggests that assimilation, rather than source variation, is responsible for the range of Os isotopic variation observed. 87Sr/86Sr, La/Sm and Sr/Th are also modified by assimilation since they all correlate with 187Os/188Os. The assimilant is inferred to have a MORB-like 87Sr/86Sr with high Sr (〉700 ppm), low light on middle and heavy rare earth elements (L/M-HREE; La/Sm ∼2.5) and 187Os/188Os 〉 0.2. Such compositional features are likely to correspond to a plagioclase-rich early-arc cumulate. Given that assimilation affects lavas that were last stored at more than 5 kbar, assimilation must occur in the middle-lower crust. Only a high MgO picrite from Grenada escaped obvious assimilation (MgO = 17% wt.%) and could reflect mantle source composition. It has a very radiogenic 87Sr/86Sr (0.705) but a 187Os/188Os ratio that overlaps the mantle range (0.127). 187Os/188Os and 87Sr/88Sr ratios of the sediments and an altered basalt from the subducting slab vary from 0.18 to 3.52 and 0.708 to 0.714. We therefore suggest that, unlike Sr, no Os from the slab was transferred to the parental magmas. Os may be either retained in the mantle wedge or even returned to the deep mantle in the subducting slab.

Description: Seismic anisotropy is common within the Earth's solid interior, in the crust, in the mantle, and in the inner core. Elastic anisotropy leads to direction-dependent wave velocities, shear-wave splitting, and polarization anomalies in both surface waves and body waves. We review the basic theory and the latest developments in modeling methods for seismic-wave propagation in anisotropic media. From mineral alignment to fine-layering effects and from mid-oceanic ridges and subduction zones to sutured continental terranes, we summarize the seismological observations that can be related to elastic anisotropy, the mechanisms proposed to explain it, and the geodynamic constraints that it offers.

Description: The geochemical composition of foraminiferal tests is a valuable archive for the reconstruction of paleo-climatic, -oceanographic and -ecological changes. However, dissolution of biogenic calcite and precipitation of inorganic calcite (overgrowth and recrystallization) at the seafloor and in the sediment column can potentially alter the original geochemical composition of the foraminiferal test, biasing any resulting paleoenvironmental reconstruction. The δ11B of planktic foraminiferal calcite is a promising ocean pH-proxy but the effect of diagenesis is still poorly known. Here we present new δ11B, δ13C, δ18O, Sr/Ca and B/Ca data from multiple species of planktic foraminifera from time-equivalent samples for two low latitude sites: clay-rich Tanzanian Drilling Project (TDP) Site 18 from the Indian Ocean containing well-preserved (‘glassy’) foraminifera and carbonate-rich Ocean Drilling Program (ODP) Site 865 from the central Pacific Ocean hosting recrystallized (‘frosty’) foraminifera. Our approach makes the assumption that environmental conditions were initially similar at both sites so most chemical differences are attributable to diagenesis. Planktic foraminiferal δ18O and δ13C records show offsets in both relative and absolute values between the two sites consistent with earlier findings that these isotopic ratios are strongly influenced by diagenetic alteration. Sr/Ca and B/Ca ratios in planktic foraminiferal calcite are also offset between the two sites but there is little change in the relative difference between surface and deep dwelling taxa. In contrast, δ11B values indicate no large differences between well-preserved and recrystallized foraminifera suggesting that despite extensive diagenetic alteration the δ11B of biogenic calcite appears robust, potentially indicative of a lack of free exchange of boron between pore fluids and the recrystallizing CaCO3. Our finding may remove one potential source of uncertainty in δ11B based pH reconstructions and provide us with greater confidence in our ability to reconstruct pH in the ancient oceans from at least some recrystallized foraminiferal calcite. However, further investigations should extend this approach to test the robustness of our findings across a range of taphonomies, ages and burial settings.

Description: Climate models are potentially useful tools for addressing human dispersals and demographic change. The Arabian Peninsula is becoming increasingly significant in the story of human dispersals out of Africa during the Late Pleistocene. Although characterised largely by arid environments today, emerging climate records indicate that the peninsula was wetter many times in the past, suggesting that the region may have been inhabited considerably more than hitherto thought. Explaining the origins and spatial distribution of increased rainfall is challenging because palaeoenvironmental research in the region is in an early developmental stage. We address environmental oscillations by assembling and analysing an ensemble of five global climate models (CCSM3, COSMOS, HadCM3, KCM, and NorESM). We focus on precipitation, as the variable is key for the development of lakes, rivers and savannas. The climate models generated here were compared with published palaeoenvironmental data such as palaeolakes, speleothems and alluvial fan records as a means of validation. All five models showed, to varying degrees, that the Arabia Peninsula was significantly wetter than today during the Last Interglacial (130 ka and 126/125 ka timeslices), and that the main source of increased rainfall was from the North African summer monsoon rather than the Indian Ocean monsoon or from Mediterranean climate patterns. Where available, 104 ka (MIS 5c), 56 ka (early MIS 3) and 21 ka (LGM) timeslices showed rainfall was present but not as extensive as during the Last Interglacial. The results favour the hypothesis that humans potentially moved out of Africa and into Arabia on multiple occasions during pluvial phases of the Late Pleistocene.

Description: Carbonates are widespread at methane and petroleum seeps and are often precipitated as consequence of an alkalinity increase due to the anaerobic oxidation of methane (AOM) or, less often reported, of higher hydrocarbons. These carbonates are taphonomic windows into Earth's history, because they excellently protect the in situ formed microbial signatures (e.g. lipid biomarkers) from diagenetic destruction. A complication for paleoreconstructions, however, is that seep carbonates also encapsulate variable amounts of allochthonous organic matter, sometimes even completely obscuring authigenic microbial signatures. Seep carbonates from the Holocene Black Sea, the Pleistocene Enza River and the Pliocene San Lorenzo (both Northern Apennines, Italy) provide hints to better understand (i) the importance of processes other than AOM for the formation of seep carbonates and (ii) the controls of allochthonous and autochthonous contribution of biomarkers to organic matter in seep carbonates. Biomarker distributions in different parts of a Black Sea carbonate clearly demonstrate that high allochthonous organic matter is entrapped if AOM carbonates are formed intrasedimentary, particularly if methane supply is relatively low and external organic matter input high. High allochthonous contributions were also found in the biomarker inventory of ancient seep carbonates from the Italian Northern Apennines (Enza River and San Lorenzo) pointing at their precipitation within the sediment. Specific and complex conditions were indicated from our data for the Enza River location. Carbonate facies and particularly biomarker compositions, with abundant signatures of sulfate reducing bacteria, suggest that sulfate reduction using alkaline, and eventually sulfate- and higher hydrocarbon-enriched fluids triggered the growth of these seep carbonates. Our and other data suggest that this process has to be more considered if interpreting seep settings, particularly where microbial processes rely on rising fluids from deep petroleum reservoirs.

Description: Highlights • We examine interplay between historical seismicity, mass failures and turbidites during sapropel S1 deposition; • We reconstruct chronology of earthquake triggered turbidites in the Ionian Sea during sapropel depostion; • We reconstruct the age of sapropel S1 in our core (6.0-10.2 kyr cal. BP) through Oxcal age modeling; • Turbidite emplacement time was deduced through age modeling. • We compiled a catalogue of mass flow events during several earthquake cycles. Abstract The recurrence of mass-flow units within sapropel S1, an organic carbon-rich lower Holocene marker bed in the Eastern Mediterranean Sea, was used to study the interplay between earthquakes and sedimentation along the seismically active Calabrian Arc (Ionian Sea). Nine turbidite beds interrupt anoxic conditions during the deposition of sapropel S1. Each of these turbidites is associated with sharp grain size and geochemical elemental anomalies (high Al and Si, low Ca and coarse-grained basal part marked by Zr peaks), and with displaced foraminiferal species from different bathymetric ranges. We used these proxies to identify turbidite beds also above and below the sapropel, where turbidite signature is less clear due to the absence of major color changes. Turbidite structure and composition, as well as comparison with historical seismoturbidites, suggest a seismic triggering for such mass flow events. The peculiar color, well-known composition, geochemistry and age of sapropel S1, make this unit a key bed within which turbidites may be considered a sort of sedimentary “bar code” recording high-energy events within the background pelagic sedimentation; deciphering this code will reconstruct paleo-seismicity in this well-defined stratigraphic interval. The pelagic units bracketing turbidite beds were radiometrically dated, and the age of the sapropel S1, deduced through age modeling, is between 6.0 and 10.2 kyr cal BP. The emplacement age of each turbidite was estimated considering the average time-interval between successive turbidite beds (from pelagic sediment thickness and sedimentation rate). Subsequently these ages were further refined through age modeling. In this way, we compiled a catalogue of mass flow events during sapropel S1 deposition, a time span long enough to include several earthquake cycles and allow reliable seismic and tsunami hazard assessment in this area.

Description: Well water level changes associated with magmatic unrest can be interpreted as a result of pore pressure changes in the aquifer due to crustal deformation, and so could provide constraints on the subsurface processes causing this strain. We use finite element analysis to demonstrate the response of aquifers to volumetric strain induced by pressurized magma reservoirs. Two different aquifers are invoked – an unconsolidated pyroclastic deposit and a vesicular lava flow – and embedded in an impermeable crust, overlying a magma chamber. The time-dependent, fully coupled models simulate crustal deformation accompanying chamber pressurization and the resulting hydraulic head changes as well as flow through the porous aquifer, i.e. porous flow. The simulated strain leads to centimetres (pyroclastic aquifer) to metres (lava flow aquifer) of hydraulic head changes; both strain and hydraulic head change with time due to substantial porous flow in the hydrological system. Well level changes are particularly sensitive to chamber volume, shape and pressurization strength, followed by aquifer permeability and the phase of the pore fluid. The depths of chamber and aquifer, as well as the aquifer's Young's modulus also have significant influence on the hydraulic head signal. While source characteristics, the distance between chamber and aquifer and the elastic stratigraphy determine the strain field and its partitioning, flow and coupling parameters define how the aquifer responds to this strain and how signals change with time. We find that generic analytical models can fail to capture the complex pre-eruptive subsurface mechanics leading to strain-induced well level changes, due to aquifer pressure changes being sensitive to chamber shape and lithological heterogeneities. In addition, the presence of a pore fluid and its flow have a significant influence on the strain signal in the aquifer and are commonly neglected in analytical models. These findings highlight the need for numerical models for the interpretation of observed well level signals. However, simulated water table changes do indeed mirror volumetric strain, and wells are therefore a valuable addition to monitoring systems that could provide important insights into pre-eruptive dynamics.

Description: The outer western Crimean shelf of the Black Sea is a natural laboratory to investigate effects of stable oxic versus varying hypoxic conditions on seafloor biogeochemical processes and benthic community structure. Bottom-water oxygen concentrations ranged from normoxic (175 μmol O2 L−1) and hypoxic (〈 63 μmol O2 L−1) or even anoxic/sulfidic conditions within a few kilometers' distance. Variations in oxygen concentrations between 160 and 10 μmol L−1 even occurred within hours close to the chemocline at 134 m water depth. Total oxygen uptake, including diffusive as well as fauna-mediated oxygen consumption, decreased from 15 mmol m−2 d−1 on average in the oxic zone, to 7 mmol m−2 d−1 on average in the hypoxic zone, correlating with changes in macrobenthos composition. Benthic diffusive oxygen uptake rates, comprising respiration of microorganisms and small meiofauna, were similar in oxic and hypoxic zones (on average 4.5 mmol m−2 d−1), but declined to 1.3 mmol m−2 d−1 in bottom waters with oxygen concentrations below 20 μmol L−1. Measurements and modeling of porewater profiles indicated that reoxidation of reduced compounds played only a minor role in diffusive oxygen uptake under the different oxygen conditions, leaving the major fraction to aerobic degradation of organic carbon. Remineralization efficiency decreased from nearly 100 % in the oxic zone, to 50 % in the oxic–hypoxic zone, to 10 % in the hypoxic–anoxic zone. Overall, the faunal remineralization rate was more important, but also more influenced by fluctuating oxygen concentrations, than microbial and geochemical oxidation processes.

Description: To explore the transport of carbon into water masses from the surface ocean to depths of ∼1000 m∼1000 m in the southwest Pacific Ocean, we generated time series of radiocarbon (View the MathML sourceΔC14) from fish otoliths. Otoliths (carbonate earstones) from long-lived fish provide an indirect method to examine the “bomb pulse” of radiocarbon that originated in the 1950s and 1960s, allowing identification of changes to distributions of 14C that has entered and mixed within the ocean. We micro-sampled ocean perch (Helicolenus barathri ) otoliths, collected at ∼400–500 m∼400–500 m in the Tasman Sea, to obtain measurements of View the MathML sourceΔC14 for those depths. We compared our ocean perch View the MathML sourceΔC14 series to published otolith-based marine surface water View the MathML sourceΔC14 values (Australasian snapper (Chrysophrys auratus) and nannygai (Centroberyx affinis)) and to published deep-water values (800–1000 m; orange roughy (Hoplostethus atlanticus )) from the southwest Pacific to establish a mid-water View the MathML sourceΔC14 series. The otolith bomb 14C results from these different depths were consistent with previous water mass results in the upper 1500 m of the southwest Pacific Ocean (e.g. World Ocean Circulation Experiment and Geochemical Ocean Sections Study). A comparison between the initial View the MathML sourceΔC14 bomb pulse rise at 400–500 m suggested a ventilation lag of 5 to 10 yr, whereas a comparison of the surface and depths of 800–1000 m detailed a 10 to 20 yr lag in the time history of radiocarbon invasion at this depth. Pre-bomb reservoir ages derived from otolith 14C located in Tasman Sea thermocline waters were ∼530 yr∼530 yr, while reservoir ages estimated for Tasman Antarctic intermediate water were ∼730 yr∼730 yr.

Description: The present study is focused on the examination of the state of the recently activated Santorini VolcanicComplex (SVC) area, located in the Southern Aegean Sea. The seismic activity was investigated in detailand different methodologies have been applied to examine whether the SVC area approached an eruptivephase during the 2011–2012 seismic crisis period. The detailed spatiotemporal analysis for the broaderstudy area revealed two different seismic patterns: low seismic activity until 2010, mainly concentratedwithin the Anydros basin and close to the submarine volcano, Columbo, and activation during 2011 and2012 of two previously quiescent regions. The first is the Santorini Caldera, which had been active formore than one year, and the second is the area south of Christiana Islands, which was activated in January2012 with the occurrence of two major events of magnitude 5.1 and 5.2, respectively, followed by a largenumber of aftershocks.In this study, manual analysis and relocation of the 2011–2012 seismic crisis in the SVC was performed,in order to obtain a high-resolution image of the activated structures. The seismicity within the SantoriniCaldera, which is oriented approximately NE-SW, was rapidly diminished after the activation of theChristiana area. A large number of focal mechanisms were determined which mainly indicated strike-slip faulting inside the Caldera. Furthermore, the fault plane solutions of the major events in the areasouth of Christiana, derived by waveform modeling, also suggested similar type of faulting. This typediffers from the normal faults observed in the Anydros basin. However, the stress field in all cases isconsistently oriented in a NW-SE direction. Since the Santorini Volcano was seismically activated forthe first time after the 1950 eruption, changes of the physical properties of the medium were examinedusing different approaches to assess the state of the volcano. The shear-wave splitting analysis revealedthe existence of an anisotropic upper crust, while no significant temporal variations of the anisotropydirection were observed. The majority of the recorded events were classified as volcano-tectonic micro-earthquakes using spectral analysis. Nevertheless, certain cases of spasmodic bursts and LF events, whichcan be related to magma activity, have also been identified. A region of low Vsand high Vp/Vsratio hasbeen detected north of Nea Kammeni, at depths between 3 and 5 km, that is directly associated with themagmatic chamber inside the Caldera. The applied multi-method approach revealed that the SantoriniVolcano was activated, while the obtained results indicate that the Volcano did not reach a critical stateduring the 2011–2012 unrest period.

Description: The geologic framework controls on modern barrier island transgression and the relationship of these controls to subsurface structure, hydrology and island geomorphology are not well understood. Recent evidence suggests that alongshore variations in pre-Holocene geology of barrier islands modify nearshore hydrodynamic processes and sediment transport, ultimately affecting how barrier islands will respond to relative sea-level rise. Explorations of Holocene barrier island geology are usually based on cores to supplement bathymetric, onshore/offshore seismic and/or ground-penetrating radar (GPR) surveys. The advantages and limitations of these methods with respect to barrier island investigations are briefly described in this review. Alternative near-surface geophysical methods including electromagnetic induction (EMI) sensors are increasingly being used for coastal research because they are non-invasive, provide continuous subsurface information across a variety of sub-environments, and are capable of characterizing large areas in a short time. Although these EMI sensors have shown promise in coastal applications, a number of issues primarily related to subsurface hydrology need to be addressed to fully assess the limitations of this technique. This paper reviews the theory, methodology and applications of EMI in support of geologic framework studies with particular reference to barrier islands. Resolution of these issues will allow EMI sensors to complement and offer significant advantages over traditional methods in support of an improved understanding of large-scale barrier island evolution.

Description: A new algorithmto retrieve characteristics (albedo and melt pond fraction) of summer ice in the Arctic fromoptical satellite data is described. In contrast to other algorithms this algorithm does not use a priori values of the spectral albedo of the sea-ice constituents (such asmelt ponds,white ice etc.). Instead, it is based on an analytical solution for the reflection from sea ice surface. The algorithm includes the correction of the sought-for ice and ponds characteristics with the iterative procedure based on the Newton–Raphson method. Also, it accounts for the bi-directional reflection from the ice/snow surface, which is particularly important for Arctic regions where the sun is low. The algorithm includes an original procedure for the atmospheric correction, as well. This algorithm is implemented as computer code called Melt Pond Detector (MPD). The input to the current version of the MPD algorithm is the MERIS Level 1B data, including the radiance coefficients at ten wavelengths and the solar and observation angles (zenith and azimuth). Also, specific parameters describing surface and atmospheric state can be set in a configuration input file. The software output is the map of the melt ponds area fraction and the spectral albedo of sea-ice in HDF5 format. The numerical verification shows that theMPD algorithm provides more accurate results for the light ponds than for the dark ones. The spectral albedo is retrieved with high accuracy for any type of ice and ponds.

Description: Based upon thermal-infrared satellite imagery in combination with ERA-Interim atmospheric reanalysis data, we derive long-term polynya characteristics such as polynya area, thin-ice thickness distribution, and ice-production rates for a 13-year investigation period (2002–2014) for the austral winter (1 April to 30 September) in the Antarctic southern Weddell Sea. All polynya parameters are derived from daily cloud-cover corrected thin-ice thickness composites. The focus lies on coastal polynyas which are important hot spots for new-ice formation, bottom-water formation, and heat/moisture release into the atmosphere. MODIS has the capability to resolve even very narrow coastal polynyas. Its major disadvantage is the sensor limitation due to cloud cover. We make use of a newly developed and adapted spatial feature reconstruction scheme to account for cloud-covered areas. We find the sea-ice areas in front of the Ronne and Brunt ice shelves to be the most active with an annual average polynya area of 3018 ± 1298 and 3516 ± 1420 km2 as well as an accumulated volume ice production of 31 ± 13 and 31 ± 12 km3, respectively. For the remaining four regions, estimates amount to 421 ± 294 km2 and 4 ± 3 km3 (Antarctic Peninsula), 1148 ± 432 km2 and 12 ± 5 km3 (iceberg A23A), 901 ± 703 km2 and 10 ± 8 km3 (Filchner Ice Shelf), as well as 499 ± 277 km2 and 5 ± 2 km3 (Coats Land). Our findings are discussed in comparison to recent studies based on coupled sea-ice/ocean models and passive-microwave satellite imagery, each investigating different parts of the southern Weddell Sea.

Description: Highlights • Experimental stable isotope study on trophic plasticity in adult Macoma balthica. • Contrasts in isotope signatures attributed to hydrographical and biotic settings. • Changing signatures in transplanted clams show switch in feeding in new environment. Abstract Species show varying levels of plasticity regarding morphology, physiology and behaviour in relation to their immediate environment, and several trait characteristics are habitat-dependent. Determining when and how the environmental context changes trait expression is of key importance for understanding the role of individual species for ecosystem functioning. The tellinid clam Macoma balthica can vary its feeding behaviour, shifting between deposit- and suspension-feeding. In order to study the context-dependency of this trophic plasticity in adult clams, we conducted an experiment assessing food uptake by using stable isotope signatures (δ13C and δ15N). We transplanted individuals between and within two shallow bays differing in exposure (exposed–sheltered) and sediment characteristics. Our results show that isotope signatures of clams differed between the two habitats and that clams in the exposed site showed stable isotope values linked to a diet of suspended particulate organic material, while values of individuals in the sheltered site corresponded to an uptake of sediment-bound organic material. Clams transplanted between these two environmental settings were gradually showing differing isotopic signatures from clams at their original habitat, over time mirroring the changes in clams in the site to which they were transferred. The shift in carbon and nitrogen stable isotopes of the clams provides insights into the context-dependent intraspecific feeding plasticity of this zoobenthic key species. The causes for this shift were coupled to contrasts in the hydrodynamic and biotic setting, implying that feeding plasticity may explain adaptation of organisms to changes in their surroundings.

Description: Top-down trophic cascades are well known in many autotrophic systems, yet their role in heterotrophic food webs is less clear. We collated data from 78 investigations and applied meta-analysis to evaluate the strength of detrital trophic cascades in freshwater and terrestrial food webs. Predators exerted significant, indirect controls on detrital resources, in line with theoretical predictions, whereas this was not the case for omnivores, suggesting that detritivory prevailed over predation and disrupted trophic cascades. Significant relationships were observed for both types of consumer in terms of their responses to detrital quality: specifically, unimodal curves across C:N and N:P gradients were the best fits for predators, whilst cascade strength responses to detrital quality were saddle shaped. These insights suggest that while predatory strategy is determining cascades within detrital-based systems, resource quality has bottom-up role effects on predators and on preferential consumption by omnivores. As such, these environmental responses seem to mirror some provisioning and supporting services; our findings are discussed within conceptual frameworks related to ecological stoichiometry and ecosystem services.

Description: The ocean is a substantial source of nitrous oxide (N2O) to the atmosphere, but little is known about how this flux might change in the future. Here, we investigate the potential evolution of marine N2O emissions in the 21st century in response to anthropogenic climate change using the global ocean biogeochemical model NEMO-PISCES. Assuming nitrification as the dominant N2O formation pathway, we implemented two different parameterizations of N2O production which differ primarily under low-oxygen (O2) conditions. When forced with output from a climate model simulation run under the business-as-usual high-CO2 concentration scenario (RCP8.5), our simulations suggest a decrease of 4 to 12 % in N2O emissions from 2005 to 2100, i.e., a reduction from 4.03/3.71 to 3.54/3.56 TgN yr−1 depending on the parameterization. The emissions decrease strongly in the western basins of the Pacific and Atlantic oceans, while they tend to increase above the oxygen minimum zones (OMZs), i.e., in the eastern tropical Pacific and in the northern Indian Ocean. The reduction in N2O emissions is caused on the one hand by weakened nitrification as a consequence of reduced primary and export production, and on the other hand by stronger vertical stratification, which reduces the transport of N2O from the ocean interior to the ocean surface. The higher emissions over the OMZ are linked to an expansion of these zones under global warming, which leads to increased N2O production, associated primarily with denitrification. While there are many uncertainties in the relative contribution and changes in the N2O production pathways, the increasing storage seems unequivocal and determines largely the decrease in N2O emissions in the future. From the perspective of a global climate system, the averaged feedback strength associated with the projected decrease in oceanic N2O emissions amounts to around −0.009 W m−2 K−1, which is comparable to the potential increase from terrestrial N2O sources. However, the assessment for a potential balance between the terrestrial and marine feedbacks calls for an improved representation of N2O production terms in fully coupled next-generation Earth system models.

Description: Highlights: • Reduced taxon-richness (96%, 151–6 taxa) leads to overall reduction in function. • Functional richness remained high (66% of tot.) even at the lowest taxon richness. • Analysis of changes in trait categories showed the importance of multifunctionality. • Number of taxa per trait category gives complementary information to the FD index. • Rare species did not express unique traits. Abstract: Alterations to ecosystem function due to reductions in species richness are predicted to increase as humans continue to affect the marine environment, especially in coastal areas, which serve as the interface between land and sea. The potential functional consequences due to reductions in species diversity have attracted considerable attention recently but little is known about the consequence of such loss in natural communities. We examined how the potential for function is affected by natural reductions in taxon richness using empirical (non-simulated) coastal marine benthic macrofaunal data from the Skagerrak-Baltic Sea region (N. Europe), where taxon richness decreases 25-fold, from 151 to 6 taxa. To estimate functional changes we defined multiple traits (10 traits and 51 categories) on which trait category richness, functional diversity (FD) and number of taxa per trait category were calculated. Our results show that decrease in taxon richness leads to an overall reduction in function but functional richness remains comparatively high even at the lowest level of taxon richness. Although the taxonomic reduction was sharp, up to 96% of total taxon richness, we identified both potential thresholds in functioning and subtler changes where function was maintained along the gradient. The functional changes were not only caused by reductions in taxa per trait category, some categories were maintained or even increased. Primarily, the reduction in species richness altered trait categories related to feeding, living and movement and thus potentially could have an effect on various ecosystem processes. This highlights the importance of recognising ecosystem multifunctionality, especially at low taxonomic richness. We also found that in this system rare species (singletons) did not stand for the functional complexities and changes. Our findings were consistent with theoretical and experimental predictions and suggest that a large proportion of the information about alterations of function is found in measures such as functional diversity and number of taxa per trait category.

Description: Highlights: • Rheological evolution of the rock is influenced by its original and evolving structure. • Strain localizes at boundary between domains of different assemblages (qtz-, fsp-rich). • Strain localizes in original and recrystallized/precipitated finer-grained phases. • Formation of interconnected meso- and microshear zones deformed by diffusion creep. • The rheology of studied example is controlled by Newtonian flow. Abstract: Deformation microstructures of a quartzo-feldspathic pegmatite deformed at mid-crustal levels allow the study of the dynamics of strain localization in polymineralic rocks. Strain localization results from (i) difference in grain sizes between phases, both original and obtained during fluid present reactions and (ii) initial compositional banding. Due to original difference in grain size stress concentrates in the initially finer-grained phases resulting in their intense grain size reduction via subgrain rotation recrystallization (SGR). When the grain size is sufficiently reduced through either deformation or interphase coupled dissolution–precipitation replacement of the coarse grained feldspar, aggregates start to deform by dominantly diffusion accommodated grain boundary sliding (GBS). Phase mixing inhibits grain growth and sustains a grain size allowing GBS. Consequently, discontinuous microscale shear zones form locally within initially coarse grained areas. At the same time difference in strain rate between feldspar-rich and quartz-rich domains needs to be accommodated at domain boundaries. This results in the formation of continuous mesoscale shear zones deformed by GBS. Once these are formed, deformation in the coarse grained parts is arrested and strain is mainly accommodated in the mesoscale shear zones resulting in “superplastic” behaviour consistent with diffusion creep.

Description: Highlights: • β-glucan induces apoptosis in a time and concentration dependent manner. • ≥500 μg/ml induce apoptosis in pronephric cells in vitro. • Apoptosis is observed after 6 h of incubation. In previous studies an effect of β-glucan on apoptosis in fish was noted and in this investigation we determine the time and concentration dependency of this effect. Primary cell cultures of pronephric carp cells were incubated for 6, 24, 48 h with various concentrations ranging from 0 - 1000 μg/ml of MacroGard® β-glucan. Apoptosis was monitored via acridine orange staining. Results indicate a clear effect of time and concentration on the induction of apoptosis in vitro, with only concentration ≥ 500 μg/ml causing significantly higher percentages of apoptotic cells. Apoptosis was detected after 6 h. This concentration dependent effect has to be considered when studying apoptosis in relation to immunostimulation.

Description: Highlights: • Elemental C:N:P variations of organic matter are simulated at monitoring site BY15. • No N2 fixation needed to explain observed PO4PO4 and pCO2pCO2 levels after spring bloom. • Model features relevance of DOP production and remineralization for N2 fixation. • Model estimates of annual N2 fixation are View the MathML source297±24mmolNm-2a-1. • Model estimates of annual total production are View the MathML source14.16±0.71molCm-2a-1. Abstract: For most marine ecosystems the growth of diazotrophic cyanobacteria and the associated amount of nitrogen fixation are regulated by the availability of phosphorus. The intensity of summer blooms of nitrogen (N2) fixing algae in the Baltic Sea is assumed to be determinable from a surplus of dissolved inorganic phosphorus (DIP) that remains after the spring bloom has ended. But this surplus DIP concentration is observed to continuously decrease at times when no appreciable nitrogen fixation is measured. This peculiarity is currently discussed and has afforded different model interpretations for the Baltic Sea. In our study we propose a dynamical model solution that explains these observations with variations of the elemental carbon-to-nitrogen-to-phosphorus (C:N:P) ratio during distinct periods of organic matter production and remineralization. The biogeochemical model resolves seasonal C, N and P fluxes with depth at the Baltic Sea monitoring site BY15, based on three assumptions: (1) DIP is utilized by algae though not needed for immediate growth, (2) the uptake of dissolved inorganic nitrogen (DIN) is hampered when the algae׳s phosphorus (P) quota is low, and (3) carbon assimilation continues at times of nutrient depletion. Model results describe observed temporal variations of DIN, DIP and chlorophyll-a concentrations along with partial pressure of carbon dioxide (pCO2)(pCO2). In contrast to other model studies, our solution does not require N2 fixation to occur shortly after the spring bloom to explain DIP drawdown and pCO2pCO2 levels. Model estimates of annual N2 fixation are View the MathML source297±24mmolNm-2a-1. Estimates of total production are View the MathML source14200±700mmolCm-2a-1, View the MathML source1400±70mmolNm-2a-1, and View the MathML source114±5mmolPm-2a-1 for the upper 50 m. The models C, N and P fluxes disclose preferential remineralization of P and of organic N that was introduced via N2 fixation. Our results are in support of the idea that P uptake by phytoplankton during the spring bloom contributes to the consecutive availability of labile dissolved organic phosphorus (LDOP). The LDOP is retained within upper layers and its remineralization affects algal growth in summer, during periods of noticeable N2 fixation.

Description: Whilst Herpesviridae, which infect higher vertebrates, actively influence host immune responses to ensure viral replication, it is mostly unknown if Alloherpesviridae, which infect lower vertebrates, possess similar abilities. An important antiviral response is clearance of infected cells via apoptosis, which in mammals influences the outcome of infection. Here, we utilise common carp infected with CyHV-3 to determine the effect on the expression of genes encoding apoptosis-related proteins (p53, Caspase 9, Apaf-1, IAP, iNOS) in the pronephros, spleen and gills. The influence of CyHV-3 on CCB cells was also studied and compared to SVCV (a rhabdovirus) which induces apoptosis in carp cell lines. Although CyHV-3 induced iNOS expression in vivo, significant induction of the genetic apoptosis pathway was only seen in the pronephros. In vitro CyHV-3 did not induce apoptosis or apoptosis-related expression whilst SVCV did stimulate apoptosis. This suggests that CyHV-3 possesses mechanisms similar to herpesviruses of higher vertebrates to inhibit the antiviral apoptotic process.

Description: Coastal zones are important source regions for a variety of trace gases including halocarbons and sulphur-bearing species. While salt-marshes, macroalgae and phytoplankton communities have been intensively studied, little is known about trace gas fluxes in seagrass meadows. Here we report results of a newly developed dynamic flux chamber system that can be deployed in intertidal areas over full tidal cycles allowing for high time resolved measurements. The trace gases measured in this study included carbon dioxide (CO2), methane (CH4) and a variety of hydrocarbons, halocarbons and sulphur-bearing compounds. The high time resolved CO2 and CH4 flux measurements revealed a complex dynamic mediated by tide and light. In contrast to most previous studies our data indicate significantly enhanced fluxes during tidal immersion relative to periods of air exposure. Short emission peaks occured with onset of the feeder current at the sampling site. We suggest an overall strong effect of advective transport processes to explain the elevated fluxes during tidal immersion. Many emission estimates from tidally influenced coastal areas still rely on measurements carried out during low tide only. Hence, our results may have significant implications for budgeting trace gases in coastal areas. This dynamic flux chamber system provides intensive time series data of community respiration (at night) and net community production (during the day) of shallow coastal systems.

Description: In this study we present gas-exchange measurements conducted in a large-scale wind–wave tank. Fourteen chemical species spanning a wide range of solubility (dimensionless solubility, α = 0.4 to 5470) and diffusivity (Schmidt number in water, Scw = 594 to 1194) were examined under various turbulent (u10 = 0.73 to 13.2 m s−1) conditions. Additional experiments were performed under different surfactant modulated (two different concentration levels of Triton X-100) surface states. This paper details the complete methodology, experimental procedure and instrumentation used to derive the total transfer velocity for all examined tracers. The results presented here demonstrate the efficacy of the proposed method, and the derived gas-exchange velocities are shown to be comparable to previous investigations. The gas transfer behaviour is exemplified by contrasting two species at the two solubility extremes, namely nitrous oxide (N2O) and methanol (CH3OH). Interestingly, a strong transfer velocity reduction (up to a factor of 3) was observed for the relatively insoluble N2O under a surfactant covered water surface. In contrast, the surfactant effect for CH3OH, the high solubility tracer, was significantly weaker

Description: Bromoform (CHBr3) is one important precursor of atmospheric reactive bromine species that are involved in ozone depletion in the troposphere and stratosphere. In the open ocean bromoform production is linked to phytoplankton that contains the enzyme bromoperoxidase. Coastal sources of bromoform are higher than open ocean sources. However, open ocean emissions are important because the transfer of tracers into higher altitude in the air, i.e. into the ozone layer, strongly depends on the location of emissions. For example, emissions in the tropics are more rapidly transported into the upper atmosphere than emissions from higher latitudes. Global spatio-temporal features of bromoform emissions are poorly constrained. Here, a global three-dimensional ocean biogeochemistry model (MPIOM-HAMOCC) is used to simulate bromoform cycling in the ocean and emissions into the atmosphere using recently published data of global atmospheric concentrations (Ziska et al., 2013) as upper boundary conditions. Our simulated surface concentrations of CHBr3 match the observations well. Simulated global annual emissions based on monthly mean model output are lower than previous estimates, including the estimate by Ziska et al. (2013), because the gas exchange reverses when less bromoform is produced in non-blooming seasons. This is the case for higher latitudes, i.e. the polar regions and northern North Atlantic. Further model experiments show that future model studies may need to distinguish different bromoform-producing phytoplankton species and reveal that the transport of CHBr3 from the coast considerably alters open ocean bromoform concentrations, in particular in the northern sub-polar and polar regions.

Description: Highlights: • Different disturbance–diversity relationships in phytoplankton are still unresolved. • We modelled phytoplankton under different types of disturbance. • Diversity is increased by disturbance in comparison with a chemostat. • The disturbance–diversity relationship depends on the type of disturbance. • Disturbance increases the timescale of competitive exclusion. Abstract: The way in which disturbance shapes phytoplankton diversity is still subject to much debate. Various disturbance–diversity relationships have been proposed, with diversity increasing or decreasing with the intensity or frequency of disturbance, or peaking at intermediate levels. A key problem in this discussion is the use of different concepts of “disturbance”, which can encompass both positive and negative effects on phytoplankton. To investigate how different modes of disturbance affect phytoplankton diversity, we subject populations of modelled phytoplankton to different frequencies and intensities of three different disturbance modes: a positive, a negative and a combined positive and negative disturbance mode. A chemostat system, considered undisturbed, is used for comparison. We show that (1) disturbance increases phytoplankton coexistence, (2) the disturbance–diversity relationship depends on the type of disturbance and (3) the effect is transient and disturbances predominantly affect the timescale of competitive exclusion.

Description: In this study we report fluxes of chloromethane (CH3Cl), bromomethane (CH3Br), iodomethane (CH3I), and bromoform (CHBr3) from two sampling campaigns (summer and spring) in the seagrass dominated subtropical lagoon Ria Formosa, Portugal. Dynamic flux chamber measurements were performed when seagrass patches were either air-exposed or submerged. Overall, we observed highly variable fluxes from the seagrass meadows and attributed them to diurnal cycles, tidal effects, and the variety of possible sources and sinks in the seagrass meadows. The highest emissions with up to 130 nmol m−2 h−1 for CH3Br were observed during tidal changes, from air exposure to submergence and conversely. Furthermore, during the spring campaign, the emissions of halocarbons were significantly elevated during tidal inundation as compared to air exposure. Accompanying water sampling performed during both campaigns revealed elevated concentrations of CH3Cl and CH3Br, indicating productive sources within the lagoon. Stable carbon isotopes of halocarbons from the air and water phase along with source signatures were used to allocate the distinctive sources and sinks in the lagoon. Results suggest that CH3Cl was rather originating from seagrass meadows and water column than from salt marshes. Aqueous and atmospheric CH3Br was substantially enriched in 13C in comparison to source signatures for seagrass meadows and salt marshes. This suggests a significant contribution from the water phase on the atmospheric CH3Br in the lagoon. A rough global upscaling yields annual productions from seagrass meadows of 2.3–4.5 Gg yr−1, 0.5–1.0 Gg yr−1, 0.6–1.2 Gg yr−1, and 1.9–3.7 Gg yr−1 for CH3Cl, CH3Br, CH3I, and CHBr3 respectively. This suggests a minor contribution from seagrass meadows to the global production of CH3Cl and CH3Br with about 0.1 and 0.7%, respectively. In comparison to the known marine sources for CH3I and CHBr3, seagrass meadows are rather small sources.

Description: The recrystallisation (dissolution–precipitation) of carbonate sediments has been successfully modelled to explain profiles of pore water Sr concentration and radiogenic Sr isotope composition at different locations of the global ocean. However, there have been few systematic studies trying to better understand the relative importance of factors influencing the variability of carbonate recrystallisation. Here we present results from a multi-component study of recrystallisation in sediments from the Integrated Ocean Drilling Program (IODP) Expedition 320/321 Pacific Equatorial Age Transect (PEAT), where sediments of similar initial composition have been subjected to different diagenetic histories. The PEAT sites investigated exhibit variable pore water Sr concentrations gradients with the largest gradients in the youngest sites. Radiogenic Sr isotopes suggest recrystallisation was relative rapid, consistent with modelling of other sediment columns, as the 87Sr/86Sr ratios are indistinguishable (within 2σ uncertainties) from contemporaneous seawater 87Sr/86Sr ratios. Bulk carbonate leachates and associated pore waters of Site U1336 have lower 87Sr/86Sr ratios than contemporaneous seawater in sediments older than 20.2 Ma most likely resulting from the upward diffusion of Sr from older recrystallised carbonates. It seems that recrystallisation at Site U1336 may still be on-going at depths below 102.5 rmcd (revised metres composite depth) suggesting a late phase of recrystallisation. Furthermore, the lower Sr/Ca ratios of bulk carbonates of Site U1336 compared to the other PEAT sites suggest more extensive diagenetic alteration as less Sr is incorporated into secondary calcite. Compared to the other PEAT sites, U1336 has an inferred greater thermal gradient and a higher carbonate content. The enhanced thermal gradient seems to have made these sediments more reactive and enhanced recrystallisation. In this study we investigate stable Sr isotopes from carbonate-rich deep sea sediments for the first time. Pore water δ88/86Sr increases with depth (from 0.428‰ to values reaching up to 0.700‰) at Site U1336 documenting an isotope fractionation process during recrystallisation. Secondary calcite preferentially incorporates the lighter Sr isotope (86Sr) leaving pore waters isotopically heavy. The δ88/86Sr values of the carbonates themselves show more uniform values with no detectable change with depth. Carbonates have a much higher Sr content and total Sr inventory than the pore waters meaning pore waters are much more sensitive to fractionation processes than the carbonates. The δ88/86Sr results indicate that pore water stable Sr isotopes have the potential to indicate the recrystallisation of carbonate sediments.

Description: The southern part of the Baltic Shield hosts a series of mafic dykes and sills of Mesoproterozoic ages, including a ca. 1.53–1.46 Ga sheet-like gabbro-dolerite sills and the Salmi plateau-basalts from the Lake Ladoga region. Based on chiefly geochemical data, the region is conventionally interpreted as an intracratonic Ladoga rift (graben). We question the validity of this geodynamic interpretation by analyzing regional geophysical data (crustal structure, heat flow, Bouguer gravity anomalies, magnetic anomalies, and mantle Vs velocities). We provide a complete list of tectonic, magmatic, and geophysical characteristics typical of continental rifts in general and demonstrate that, except for magmatic and, perhaps, some gravity signature, the Lake Ladoga region lacks any other rift features. We also compare the geophysical data from the Lake Ladoga region with similar in age Midcontinent and Valday rifts, and provide alternative explanations for Mesoproterozoic geodynamic evolution of the southern Baltic Shield. We propose that Mesoproterozoic mafic intrusions in southern Fennoscandia may be associated with a complex deformation pattern during reconfiguration of (a part of) Nuna (Columbia) supercontinent, which led to magma intrusions as a series of mafic dykes along lithosphere weakness zones and ponding of small magma pockets within the cratonic lithosphere. Consequent magma cooling and its partial transition to eclogite facies could have led to the formation of a series of basement depressions, similar to intracratonic basins of North America, while spatially heterogeneous thermo-chemical subsidence, with phase transitions locally speeded by the presence of (subduction-related) fluids, could have produced a series of faults bounding graben-like structures.

Description: Some populations of brown seaweed species inhabit metal-polluted environments and can develop tolerance to metal stress, but the mechanisms by which this is accomplished are still to be elucidated. To address this, the responses of two strains of the model brown alga Ectocarpus siliculosus isolated from sites with different histories of metal contamination exposed to total copper (CuT) concentrations ranging between 0 and 2.4 μM for 10 days were investigated. The synthesis of the metal-chelator phytochelatin (PCs) and relative levels of transcripts encoding the enzymes γ-glutamylcysteine synthetase (γ-GCS), glutathione synthase (GS) and phytochelatin synthase (PCS) that participate in the PC biosynthetic pathway were measured, along with the effects on growth, and adsorption and uptake of Cu. Growth of strain LIA, from a pristine site in Scotland, was inhibited to a greater extent, and at lower concentrations, than that of Es524, isolated from a Cu-contaminated site in Chile. Concentrations of intra-cellular Cu were higher and the exchangeable fraction was lower in LIA than Es524, especially at the highest exposure levels. Total glutathione concentrations increased in both strains with Cu exposure, whereas total PCs levels were higher in Es524 than LIA; PC2 and PC3 were detected in Es524 but PC2 only was found in LIA. The greater production and levels of polymerisation of PCs in Es524 can be explained by the up-regulation of genes encoding for key enzymes involved in the synthesis of PCs. In Es524 there was an increase in the transcripts of γ-GCS, GS and PCS, particularly under high Cu exposure, whereas in LIA4 transcripts of γ-GCS1 increased only slightly, γ-GCS2 and GS decreased and PCS did not change. The consequences of higher intra-cellular concentrations of Cu, lower production of PCs, and lower expression of enzymes involved in GSH-PCs synthesis may be contributing to an induced oxidative stress condition in LIA, which explains, at least in part, the observed sensitivity of LIA to Cu. Therefore, responses to Cu exposure in E. siliculosus relate to the contamination histories of the locations from where the strains were isolated and differences in Cu exclusion and PCs production are in part responsible for the development of intra-specific resistance.

Description: Highlights: • Abyssal AUV-based microstructure measurements over rough topography. • Indications for hydraulic control downstream of a sill in a Mid-Atlantic Ridge valley. • Asymmetric distribution of dissipation rate and elevated density variability. Abstract: Diapycnal mixing in the deep ocean is known to be much stronger in the vicinity of rough topography of mid-ocean ridges than above abyssal plains. In this study a horizontally profiling microstructure probe attached to an autonomous underwater vehicle (AUV) is used to infer the spatial distribution of the dissipation rate of turbulent kinetic energy (ε ) in the central valley of the Mid-Atlantic Ridge. To the authors’ knowledge, this is the first successful realization of a horizontal, deep-ocean microstructure survey. More than 22 h of horizontal, near-bottom microstructure data from the Lucky Strike segment (37 °N) are presented. The study focuses on a channel with unidirectional sill overflow. Density was found to decrease along the channel following the mean northward flow of 3 to 8 cm/s. The magnitude of the rate of turbulent kinetic energy dissipation was distributed asymmetrically relative to the position of the sill. Elevated dissipation rates were present in a segment 1-4 km downstream (north) of the sill with peak values of 1⋅10−71⋅10−7 W/kg. Large flow speeds and elevated density finestructure were observed within this segment. Lowered hydrographic measurements indicated unstable stratification in the same region. The data indicate that hydraulic control is established at least temporarily. Inside the channel at wavelengths between 1 m and 250 m the slopes of AUV-inferred horizontal temperature gradient spectra were found to be consistent with turbulence in the inertial-convective subrange. Integrated temperature gradient variance in this wavelength interval is consistent with an ε2/3 dependence. The results illustrate that deep-reaching AUVs are a useful tool to study deep ocean turbulence over complex terrain where free-falling and lowered turbulence measurements are inefficient and time-consuming.

Description: Abyssal macrofaunal composition of 21 epibenthic sledge hauls from twelve stations taken in the Kuril–Kamchatka Trench (KKT) and at the adjacent abyssal plain, Northwest Pacific, is presented. Sampling with the fine meshed epibenthic sledge yielded higher abundances and species richness than was reported from previous expeditions from board of RV Vityaz. In total 84,651 invertebrates were sampled with RV Sonne between July and September of 2012 (31,854 invertebrates if standardised for 1000 m2 trawled distances) from 41 taxa of different taxonomic ranks (15 phyla, 28 classes, 7 orders) were sampled from a trawled area of 53,708 m² and have been analyzed. Few taxa were frequent and most taxa were rare in the samples, twelve taxa occurred with more than 1% frequency. Of these, the Polychaeta were most abundant followed by the benthic Copepoda and Isopoda. Total numbers of individuals varied between stations and were highest with 4238 individuals at station 2-10 close to the KKT in 4865 m depth and lowest with 374 individuals at station 6-11 in 5305 m depth. At this station also the lowest number of taxa occurred (18 taxa) while the highest number occurred with 31 taxa at station 3-9 in 4991 m depth. Numbers of individuals decreased with increasing depth between 4830 and 5780 m. Crustaceans of the superorder Peracarida were one of the dominating taxa with four orders occurring frequently in most samples. In total, Isopoda were most important and occurred with 59% of all peracarid orders sampled, followed by Amphipoda with 21%, Tanaidacea with 11%, Cumacea with 9%, and Mysidacea with 〈1%. The communities of the stations (and hauls) of the KKT abyssal area differ in terms of taxon composition from each other. A cluster analysis (nMDS) performed for all sampled stations revealed no clear pattern of community similarity between stations or hauls. All hauls close to the trench (2-9 and 2-10 close to the eastern slope of the KKT; and 3-9 and 4-3 at the western slope) were most different to the other hauls. Hauls 8-9 and 8-12 as well as 5-10 and 7-10 in the approximate centre of the overall research area were most similar (88% similarity). The non-isolated KKT area is characterized by higher abundances and higher benthic species richness than the geographically isolated and young deep-sea basin of the Sea of Japan.

Description: The isopod family Munnopsidae Lilljeborg, 1864 was the most diverse and species richest family among all macrobenthic organisms collected during the expedition KuramBio in the abyssal area off the Kuril–Kamchatka Trench (R.V. Sonne, 2012). The munnopsid genus Microcope Malyutina, 2008, represented by two species, was one of the most abundant and frequent isopod genera sampled at all stations. Microcope ovata ( Birstein, 1970), the only known Pacific species of Microcope to date, is redescribed based on the new collections, since the types of the species were lost. Descriptions of a new species from the KuramBio samples, Microcope stenopigussp. nov. and a new species from the opposite side of Pacific Ocean, from the southeastern Australian slope, Microcope justisp. nov., are presented herein. These findings increase the number of described species of Microcope to five and extended the geography of the genus from the previously known South Atlantic, Antarctic and the northwestern Pacific to the new localities from the southwestern Pacific. The depth range for the genus was also extended from 2014–7370 m, to 427–7370 m. A map of the distribution of the genus Microcope and a key to the described species of Microcope are provided.

Description: During the German–Russian expedition KuramBio (Kuril–Kamchatka Biodiversity Studies) from board of the RV Sonne to the Kuril–Kamchatka Trench and adjacent abyssal plain, benthic samples were taken by means of a camera-epibenthic sledge. Amongst one of the most diverse macrobenthic taxa, the Isopoda (Crustacea, Malacostraca), Ischnomesidae were the fifth most abundant isopod family in the Kuril–Kamchatka area and were sampled with 24 species from 5 genera in 21 hauls at 12 stations. Fortimesus occurs most frequently in the samples (36% of all Ischnomesidae sampled), followed by Stylomesus (26%), Heteromesus (23%), Ischnomesus (10%) and Gracilimesus (4%). Number of ischnomesid individuals is highest at station 10-12 with 35 specimens, followed by station 12-4 (30 ind.), station 6-12 (29 ind.), station 9-9 (28), and station 1-11 (24). At station 4-3 only 1 specimen was found. A key to all genera of Ischnomesidae is provided. Two new species from two genera: Stylomesus Wolff, 1956 and Fortimesus Kavanagh and Wilson, 2007 are described from the KuramBio material. Stylomesus malyutinae sp. nov. is distinguished by the smooth body surface, the shape of pleotelson and the length of uropods from other species of the genus from the Northwest Pacific Ocean. Fortimesus trispiculum sp. nov. is characterised by anterolateral projections of pereonites 1–3 which are forming an angle of about 45° with the longitudinal body axis decreasing in length from anterior to posterior.

Description: Individual wood fragments obtained from Agassiz trawl samples in the abyssal plain area off the Kuril–Kamchatka Trench were analysed for faunistic components. Out of seven pieces of wood collected, only five harboured fauna and each showed distinctively different colonization patterns. In total, 257 specimens, mainly belonging to the phyla Arthropoda, Nematoda, Mollusca and Annelida, were collected from the available pieces of wood. While wood-boring bivalves of the genus Xylophaga, generally seen as opportunists among wood-converting organisms, were present at nearly all stations, the overwhelming majority of taxa found were restricted to individual pieces of wood. A fresh piece of wood from a site opposite to the Tsugaru Strait, was the most heavily colonized. The presence of shallow or even putative fresh-water taxa beside truly deep-water components possibly suggests a recent sinking of that particular wood fragment and demonstrates the role of such ephemeral organic objects in deep-sea ecosystems as energy-rich feeding grounds and potential distributional stepping stones. Detailed studies of driftwood communities on single sunken wood fragments from deep oceans are limited. The present data not only demonstrate a tolerance of some taxa to changes in physical parameters, such as hydrostatic pressure, salinity and temperature, but also indicate a higher biodiversity on fresher wood pieces compared to wood which already underwent decomposition processes. It is, however, not clear whether the species diversity was linked to the type of wood, since exhaustive analyses on the wood pieces themselves were not conducted.

Description: During the German–Russian expedition KuramBio (Kuril–Kamchatka Biodiversity Studies) to the northwest Pacific Kuril–Kamchatka Trench and its adjacent abyssal plain, we found several kinds and sizes of plastic debris ranging from fishing nets and packaging to microplastic in the sediment of the deep-sea floor. Microplastics were ubiquitous in the smaller fractions of the box corer samples from every station from depths between 4869 and 5766 m. They were found on the abyssal plain and in the sediments of the trench slope on both sides. The amount of microplastics differed between the stations, with lowest concentration of 60 pieces per m2 and highest concentrations of more than 2000 pieces per m2. Around 75% of the microplastics (defined here as particles 〈1 mm) we isolated from the sediment samples were fibers. Other particles were paint chips or small cracked pieces of unknown origin. The Kuril–Kamchatka Trench area is known for its very rich marine fauna (Zenkevich, 1963). Yet we can only guess how these microplastics accumulated in the deep sea of the Kuril-Kamchatka Trench area and what consequences the microplastic itself and its adsorbed chemicals will have on this very special and rich deep-sea fauna. But we herewith present an evaluation of the different kinds of plastic debris we found, as a documentation of human impact into the deep sea of this region of the Northwest Pacific.

Description: During the German–Russian KuramBio (Kuril–Kamchatka Biodiversity Studies) expedition with the RV Sonne from July to September 2012, a 0.25 m2 box corer was used to sample the benthic fauna of the Kuril–Kamchatka area. 23 cores were deployed at 12 stations, and in total 36,648 individuals could be identified from a combined surface area of 5.75 m2. Total faunal densities ranged from 1024 to 16,592 ind. m−2, respectively, for the macrofauna from 436 to 3520 ind. m−2. The fauna was dominated by Nematoda (65%), even though this group and other meiofaunal taxa were only partially retained by the 300 µm screen that was used as the smallest screen for this study. The remaining part of the fauna was dominated by polychaetes (23%), followed by peracarid crustaceans (6%) and molluscs (3%). Most of the collected taxa occurred very patchily. Over 80% of the animals were extracted from the upper 2 centimeters of the sediment. Compared to other regions of the Pacific the density of the benthic fauna was unusually high. At the upper slope of the continental margin of the trench and at the southern part of the area the benthic fauna was most taxon rich. Station 3 from the continental slope of the trench was also most rich in terms of faunal density (total numbers of ind. m−2), followed by the station 11 and 12 from that the southernmost part of the abyss. Although the Kuril–Kamchatka area has been sampled on several expeditions during the last century, and some studies on the biomass of the benthic fauna have been published, this study offers the first quantitative community analysis of the benthic fauna in terms of abundance and taxon richness.

Description: Constraints on the Mediterranean Sea's storage of anthropogenic CO2 are limited, coming only from data-based approaches that disagree by more than a factor of two. Here we simulate this marginal sea's anthropogenic carbon storage by applying a perturbation approach in a high-resolution regional model. Our model simulates that, between 1800 and 2001, basin-wide CO2 storage by the Mediterranean Sea has increased by 1.0 Pg C, a lower limit based on the model's weak deep-water ventilation, as revealed by evaluation with CFC-12. Furthermore, by testing a data-based approach (transit time distribution) in our model, comparing simulated anthropogenic CO2 to values computed from simulated CFC-12 and physical variables, we conclude that the associated basin-wide storage of 1.7 Pg, published previously, must be an upper bound. Out of the total simulated storage of 1.0 Pg C, 75% comes from the air-sea flux into the Mediterranean Sea and 25% comes from net transport from the Atlantic across the Strait of Gibraltar. Sensitivity tests indicate that the Mediterranean Sea's higher total alkalinity, relative to the global-ocean mean, enhances the Mediterranean's total inventory of anthropogenic carbon by 10%. Yet the corresponding average anthropogenic change in surface pH does not differ significantly from the global-ocean average, despite higher total alkalinity. In Mediterranean deep waters, the pH change is estimated to be between -0.005 and -0.06 pH units.

Description: Highlights: • Distinct rare earth element profiles across southern boundary of Antarctic Circumpolar Current • Low particle concentrations and strong vertical exchange cause homogenous vertical profiles • Pronounced deepwater Ce anomalies reflect isolation from new continental sources to seawater The concentrations of rare earth elements (REEs) in seawater display systematic variations related to weathering inputs, particle scavenging and water mass histories. Here we investigate the REE concentrations of water column profiles in the Atlantic sector of the Southern Ocean, a key region of the global circulation and primary production. The data reveal a pronounced contrast between the vertical profiles in the Antarctic Circumpolar Current (ACC) and those to the south of the ACC in the Weddell Gyre (WG). The ACC profiles exhibit the typical increase of REE concentrations with water depth and a change in the shape of the profiles from near linear for the light REEs to more convex for the heavy REEs. In contrast, the WG profiles exhibit high REE concentrations throughout the water column with only the near surface samples showing slightly reduced concentrations indicative of particle scavenging. Seawater normalised REE patterns reveal the strong remineralisation signal in the ACC with the light REEs preferentially removed in surface waters and the mirror image pattern of their preferential release in deep waters. In the WG the patterns are relatively homogenous reflecting the prevalence of well-mixed Lower Circumpolar Deep Water (LCDW) that follows shoaling isopycnals in the region. In the WG particle scavenging of REEs is comparatively small and limited to the summer months by light limitation and winter sea ice cover. Considering the surface water depletion compared to LCDW and that the surface waters of the WG are replaced every few years, the removal rate is estimated to be on the order of 1 nmol m- 3 yr- 1 for La and Nd. The negative cerium anomalies observed in deep waters are some of the strongest found globally with only the deepest waters in parts of the Pacific having stronger anomalies. These deep waters have been isolated from fresh continental REE inputs during their long journey through the abyssal Indo-Pacific ocean and suggests that the high REE concentrations found in the ACC and WG reflect contributions from old deep waters.

Description: To assess potential impacts of climate change for a specific location, one typically employs climate model simulations at the grid box corresponding to the same geographical location. But based on regional climate model simulations, we show that simulated climate might be systematically displaced compared to observations. In particular in the rain shadow of moutain ranges, a local grid box is therefore often not representative of observed climate: the simulated windward weather does not flow far enough across the mountains; local grid boxes experience the wrong airmasses and atmospheric circulation. In some cases, also the local climate change signal is deteriorated. Classical bias correction methods fail to correct these location errors. Often, however, a distant simulated time series is representative of the considered observed precipitation, such that a non-local bias correction is possible. These findings also clarify limitations of bias correcting global model errors, and of bias correction against station data.

Description: Since the inception of the international GEOTRACES program, studies investigating the distribution of trace elements and their isotopes in the global ocean have significantly increased. In spite of this large-scale effort, the distribution of neodymium isotopes (143Nd/144Nd, εNd) and concentrations ([Nd]) in the high latitude South Pacific is still understudied, specifically north of the Antarctic Polar Front (APF). Here we report dissolved Nd isotopes and concentrations from 11 vertical water column profiles from the South Pacific between South America and New Zealand and across the Antarctic frontal system. Results confirm that Ross Sea Bottom Water (RSBW) is represented by an εNdvalue of ∼−7, and for the first time show that these Nd characteristics can be traced into the Southeast Pacific until progressive mixing with ambient Lower Circumpolar Deep Water (LCDW) dilutes this signal north of the APF. That is, εNdbehaves conservatively in RSBW, opening a path for studies of past RSBW behavior. Neodymium concentrations show low surface concentrations and a linear increase with depth north of the APF. South of the APF, surface [Nd] is high and increases with depth but remains almost constant below ∼1000m. This vertical and spatial [Nd] pattern follows the southward shoaling density surfaces of the Southern Ocean and hence suggests supply of Nd to the upper ocean through upwelling of Nd-rich deep water. Low particle abundance due to reduced opal production and seasonal sea ice cover likely contributes to the maintenance of the high upper ocean [Nd] south of the APF. This suggests a dominant lateral transport component on [Nd] and a reduced vertical control on Nd concentrations in the South Pacific south of the APF.

Description: Quantifying biotic feedbacks in response to environmental signals is fundamental to assess ecosystem perturbation. We analyzed the joint effects of eutrophication, derived from sewage pollution, and climate at the base of the pelagic food web in the Bahía Blanca Estuary (SW Atlantic Ocean). A two-year survey of environmental conditions and microplankton communities was conducted in two sites affected by contrasting anthropogenic eutrophication conditions. Under severe eutrophication, we found higher phytoplankton abundance consistently dominated by smaller sized, non siliceous species, while microzooplankton abundance remained lower and nutrient stoichiometry showed conspicuous deviations from the Redfield ratio. Phytoplankton growth in such conditions appeared controlled by phosphorous. In turn, microplankton biomass and phytoplankton size ratio (〈20. μm:〉20. μm) displayed a saturation relationship with nutrients in the highly eutrophic area, although mean phytoplankton growth was similar in both eutrophic systems. The strength of links within the estuarine network, quantified through path analysis, showed enhanced relationships under larger anthropogenic eutrophication, which fostered the climate influence on microplankton communities. Our results show conspicuous effects of severe sewage pollution on the ecological stoichiometry, i.e., N and P excess with respect to Si, altering nutrient ratios for microplankton communities. This warns on wide consequences on food web dynamics and ultimately in ecosystem assets of coastal pelagic environments.

Description: Halocarbons from oceanic sources contribute to halogens in the troposphere, and can be transported into the stratosphere where they take part in ozone depletion. This paper presents distribution and sources in the equatorial Atlantic from June and July 2011 of the four compounds bromoform (CHBr3), dibromomethane (CH2Br2), methyl iodide (CH3I) and diiodomethane (CH2I2). Enhanced biological production during the Atlantic Cold Tongue (ACT) season, indicated by phytoplankton pigment concentrations, led to elevated concentrations of CHBr3 of up to 44.7 and up to 9.2 pmol L−1 for CH2Br2 in surface water, which is comparable to other tropical upwelling systems. While both compounds correlated very well with each other in the surface water, CH2Br2 was often more elevated in greater depth than CHBr3, which showed maxima in the vicinity of the deep chlorophyll maximum. The deeper maximum of CH2Br2 indicates an additional source in comparison to CHBr3 or a slower degradation of CH2Br2. Concentrations of CH3I of up to 12.8 pmol L−1 in the surface water were measured. In contrary to expectations of a predominantly photochemical source in the tropical ocean, its distribution was mostly in agreement with biological parameters, indicating a biological source. CH2I2 was very low in the near surface water with maximum concentrations of only 3.7 pmol L−1. CH2I2 showed distinct maxima in deeper waters similar to CH2Br2. For the first time, diapycnal fluxes of the four halocarbons from the upper thermocline into and out of the mixed layer were determined. These fluxes were low in comparison to the halocarbon sea-to-air fluxes. This indicates that despite the observed maximum concentrations at depth, production in the surface mixed layer is the main oceanic source for all four compounds and one of the main driving factors of their emissions into the atmosphere in the ACT-region. The calculated production rates of the compounds in the mixed layer are 34 ± 65 pmol m−3 h−1 for CHBr3, 10 ± 12 pmol m−3 h−1 for CH2Br2, 21 ± 24 pmol m−3 h−1 for CH3I and 384 ± 318 pmol m−3 h−1 for CH2I2 determined from 13 depth profiles.

Description: During the KuramBio expedition, the abyssal plain adjacent to the Kuril–Kamchatka Trench was sampled in July–August 2012. More than 5200 individuals of Polychaeta belonging to 38 families, 108 genera and about 144 species were found. Six genera have been reported for the Northwest Pacific for the first time. About 50% of the collected polychaete species are considered as new to science. One of these, Sphaerephesia lesliae sp. n., is described herein. The detailed description of the new species is presented and its differences from similar species are shown. This eighth species of the genus is characterized by the presence of macrotubercles with two paired terminal papillae. The genus Sphaerephesia Fauchald, 1972 is newly recorded in the Northwest Pacific. An updated key to the species of the genus Sphaerephesia is provided.

Description: Highlights: • Sensitivities of annual carbon (C), nitrogen (N) and phosphorus (P) flux estimates to parameter variations are determined. • Model parameters that specify annual inventories are compared with those that determine timing and magnitude of bloom events. • Seven model parameters are of primary importance, affecting C, N and P budgets simultaneously. • Nine parameters have negligible effects on annual budget estimates and on seasonal trajectories. • Parameter categorization provides important prior information for parameter optimization in the central Baltic Sea. Abstract: This study describes a sensitivity analysis that allows the parameters of a one-dimensional ecosystem model to be ranked according to their specificity in determining biochemical key fluxes. Key fluxes of interest are annual (a) total production (TP), (b) remineralization above the halocline (RM), and (c) export at 50 m (EX) at the Baltic Sea monitoring site BY15 located in the Gotland Deep basin. The model resolves mass flux of carbon (C), nitrogen (N), and phosphorous (P), while considering nitrogen fixation explicitly. Our first null hypothesis is that the variation of the value of every single model parameter affects each annual C, N, and P budget simultaneously. Our second null hypothesis states that the variation of every parameter value induces changes at least in either of the annual C, N or P budgets. Our analyses falsify both null hypotheses and reveal that 8 out of 36 parameters must be regarded redundant, as their variation neither alter annual key fluxes nor produce considerable time-shifts in model trajectories at the respective site. Seven parameters were found to induce substantial changes in annual C, N, and P flux estimates simultaneously. The assimilation efficiency of zooplankton turned out to be of vital importance. This parameter discriminates between the assimilation and destruction of algal prey during grazing. The fraction of unassimilated dead algal cells is critical for the amount of organic matter exported out of the euphotic zone. The maximum cellular N:C quota of diazotrophs and the degradation/hydrolysis rate of detrital carbon are two parameters that will likely remain unconstrained by time series data, but both affect the annual C budget considerably. Overall, our detailed specification of model sensitivities to parameter variations will facilitate the formulation of a well-posed inverse problem for the estimation of C, N and P fluxes from stock observations at the Gotland Deep.

Description: Highlights: • Coagulation efficiency of the coccolithophorid Emiliania huxleyi was determined with Couette flow devices. • Higher coagulation efficiencies of cells were observed at lower growth rates. • Coagulation efficiency increases with the extracellular polysaccharides fraction. Abstract: Coagulation of small particles results in the formation of larger aggregates that play an important role in the biological pump, moving carbon and other elements from the surface to the deep ocean and seafloor. In this study, we estimated the efficiency of particle coagulation of the coccolithophore Emiliania huxleyi at different growth rates using Couette flow devices at a natural shear rate. To determine the impacts of chemical and biological factors involved in aggregate formation, we investigated how variance in organic matter composition, and in particular the presence of extracellular polysaccharides (EP), including transparent exopolymer particles (TEP) and acidic polysaccharides attached to the coccolith surface, affect the coagulation efficiency (α). When E. huxleyi was grown in a chemostat at different growth rates, coagulation efficiency increased from ~ 0.40 to 1 as cell growth rates declined and nutrients became more limited. With declining growth rate the concentration of EP and the number of detached coccoliths increased. Overall a close correlation between coagulation efficiency of E. huxleyi and the ratio of EP to total particle volume was observed. The minimum value of α of ~ 0.4 determined during this study is higher than estimates published for other phytoplankton cells, and may be related to the presence of EP attached to coccoliths. Based on our findings, we suggest that E. huxleyi is more prone to form aggregates, particularly during the decline of blooms, when increased production of EP and enhanced shedding of coccoliths coincide. This may be one explanation for why blooms of E. huxleyi play an important role in the biological carbon pump, efficiently enhancing the vertical flux of particles, as has been suggested by sediment trap studies.

Description: Highlights: • TEPs and CSPs showed different production patterns and particle-association behaviors. • TEPs and CSPs had different vertical distributions in the Sargasso Sea. • CSP as well as TEP gels are linked by cation bridging. • FlowCAM can be used for in-situ visualization and imaging of TEPs and CSPs in parallel-stained samples. • In-situ visualization of TEPs and CSPs led to new insights about particle interaction and their role in aggregation. Abstract: The discovery of ubiquitous, abundant and transparent gel-like particles, such as the polysaccharide-containing transparent exopolymer particles (TEP) and protein-containing Coomassie stainable particles (CSP) has changed our conception of particle–organism interaction and created new questions about the origin, composition, and role of these particles in aquatic systems. Using both standard and novel staining methods, we studied these gel-like particles to determine whether CSP and TEP are sub-units of the same particle, are distinct particles with different characteristics and behaviors, or are both. Our seawater mesocosm results show that phytoplankton produce both TEP and CSP; however, their highest abundances occur at differences phases in the phytoplankton bloom. We developed a new technique for visualizing stained transparent material in unfiltered aqueous samples with the FlowCAM; this technique allows in-situ visualization and imaging of TEP and CSP in parallel stained samples. Visual examination of stained and unstained TEP and CSP from seawater microcosms, marine algal cultures, and freshwater showed that TEP and CSP have different shape, size and particle-association behavior. In a diatom-dominated microcosm, TEP concentrations were higher than CSP concentrations and unlike CSP, TEP were usually associated with diatom cells or aggregates. The cyanobacteria culture, however, showed higher CSP than TEP concentrations and aggregates of those cells appeared to be CSP-rich. Vertical and seasonal distributions of TEP and CSP in the Sargasso Sea were different. Even though both types of particles were most abundant in the upper 100 m of the water column, CSP closely followed fluorescence and total particle concentration, while the highest TEP concentration was always in the shallowest sample collected. Thus, we conclude that TEP and CSP are different particles, produced by different species at different growth phases and rates. They have different roles and are affected by different processes according to the community composition and environmental conditions.

Description: Highlights: • The distribution of particulate matter was studied using Argo float measurements. • Its spatio-temporal properties were analyzed in the eastern tropical North Atlantic. • Surface, subsurface, intermediate and bottom nepheloid layers were considered. • High correlations between particulate matter and phytoplankton were verified. • The depth of subsurface particle maxima correlated to the distance to shore. Abstract: The spatial and temporal distribution of particulate matter in the water column of the eastern tropical North Atlantic between 16.9–22.9°N and 16.6–29.3°W was investigated using optical measurements from transmissometers mounted on Argo floats. The corresponding profiles of beam attenuation coefficients measured from February 2008 to May 2009 were used to study particulate matter in different layers such as the surface nepheloid layer (SNL), subsurface nepheloid layer (SSNL), intermediate nepheloid layer (INL) and bottom nepheloid layer (BNL) as well as to investigate sinking particles (SP). The SNL were down to about 60 m water depth at thicknesses between 20 and 60 m. Our analyses verified high correlation between particulate matter and phytoplankton in the SNL. High offshore SNL extension of up to 750 km was found in the area of Cape Blanc filaments in January 2009. Their typical widths ranged from 11 to 72 km. Furthermore, float-borne observations even resolved atmospheric dust deposition into the surface water layer during a strong Saharan dust event in October 2008. The observed dust concentration in the mixed water layer was found to vary between 0.0021 and 0.0168 g m−3 depending on applied assumptions. An abrupt change from a SNL to a SSNL regime over distances of only 80 to 90 km was observed. The particulate matter in the SSNL showed lateral extensions from 420 to 1020 km offshore. A statistically significant correlation between the depth of subsurface particle maxima and the distance to shore was found. An averaged diameter of 30 km was determined for the sharply isolated patches of INL which was consistent with model simulations of other studies. The lateral transport of particulate matter in these INL features in the area of the giant Cape Blanc filaments was found to be more pronounced than reported in earlier studies. The distribution of particulate matter within the INL filaments reached up to 610 km off the shelf edge. The frequency of INL decreased with increasing distance to shore. The sinking velocity of particulate matter of one long-term observed INL was approximately 1.3 m day−1. Highly concentrated BNLs with beam attenuation coefficients of up to 4.530 m−1 were observed in the continental slope region. INLs appeared more frequently than SP events which lead to the conclusion that the lateral transport of particulate matter in INL features in the study area was more important than their passive vertical sinking.

Description: Highlights • Magmatic chlorine-excess is a highly sensitive tracer of hydrothermal contamination. • Red Sea magmas show Cl-excess more extreme than even fast spreading ridges. • High-Cl Red Sea environment produces high-Cl hydrothermally altered crust and magmatic Cl-excess. • (Ultra)slow-spreading ridge magmas can assimilate hydrothermally altered crust. • Magmatic Cl-excess can guide hydrothermal prospection in the Red Sea. Abstract Newly formed oceanic crust is initially cooled by circulating seawater, although where this occurs and over what regions fluids enter the crust is still unclear. Differences in the chlorine (Cl) concentrations between mid-ocean ridge basalt and seawater potentially make Cl a sensitive tracer for this hydrothermal circulation, allowing assimilation of hydrothermal fluids or hydrothermally altered crust by rising magma to be traced by measuring excess Cl in erupted lavas. Such excess Cl has been found in basalts from fast-spreading ridges (Cl concentrations up to 1200 ppm), but not so far on ultraslow- and slow-spreading ridges, where lower Cl values in the basalts (~ 50–200 ppm) make variations harder to measure. The Red Sea, with its relatively saline bottom water (40–42‰, cf. 35‰ salinity in open ocean water), the presence of axial brine pools (up to 270‰ salinity) and thick evaporite sequences flanking the young rift provides an ideal opportunity to study the incorporation of hydrothermal Cl at an ultraslow- to slow-spreading ridge (max. 1.6 cm/yr). Both absolute Cl concentrations (up to 1300 ppm) and ratios of Cl to elements of similar mantle incompatibility (e.g. K, Nb) are much higher in Red Sea basalts than for average ultraslow- and slow-spreading ridges. An origin of these Cl-excesses by seafloor weathering or syn-eruptive contamination can be excluded, as can mineral/melt fractionation during melting or crystallisation, based on trace element data. Instead, the incorporation of Cl at depth derived from hydrothermal circulation either by direct assimilation of hydrothermal fluids or through mixing of magma with partial melts of the hydrothermally altered crust is indicated. We see no influence of local spreading rate, the intensity of seafloor fracturing or the calculated depth of last crystal fractionation on Cl-excess. Seafloor areas with clear evidence of present or recent hydrothermal activity (brine pool temperatures above ambient, presence of hydrothermal sediments) always show Cl-excess in the local basalts and there is a positive correlation between Cl-excess and intensity of local volcanism (as determined by the percentage of local seafloor showing volcanic bathymetric forms). From this we conclude that Cl-excess in basalts is related to high crustal temperatures and hydrothermal circulation and so can be used to prospect for active or recently extinct hydrothermal systems. Samples recovered within 5 km of a seafloor evaporite outcrop show particularly high Cl-excesses, suggesting addition of Cl from the evaporites to the inflow fluids and that this may be the length scale over which hydrothermal recharge occurs.

Description: Ocean acidification is expected to influence plankton community structure and biogeochemical element cycles. To date, the response of plankton communities to elevated CO2 has been studied primarily during nutrient-stimulated blooms. In this CO2 manipulation study, we used large-volume (~ 55 m3) pelagic in situ mesocosms to enclose a natural summer, post-spring-bloom plankton assemblage in the Baltic Sea to investigate the response of organic matter pools to ocean acidification. The carbonate system in the six mesocosms was manipulated to yield average fCO2 ranging between 365 and ~ 1230 μatm with no adjustment of naturally available nutrient concentrations. Plankton community development and key biogeochemical element pools were subsequently followed in this nitrogen-limited ecosystem over a period of 7 weeks. We observed higher sustained chlorophyll a and particulate matter concentrations (~ 25 % higher) and lower inorganic phosphate concentrations in the water column in the highest fCO2 treatment (1231 μatm) during the final 2 weeks of the study period (Phase III), when there was low net change in particulate and dissolved matter pools. Size-fractionated phytoplankton pigment analyses indicated that these differences were driven by picophytoplankton (〈 2 μm) and were already established early in the experiment during an initial warm and more productive period with overall elevated chlorophyll a and particulate matter concentrations. However, the influence of picophytoplankton on bulk organic matter pools was masked by high biomass of larger plankton until Phase III, when the contribution of the small size fraction (〈 2 μm) increased to up to 90 % of chlorophyll a. In this phase, a CO2-driven increase in water column particulate carbon did not lead to enhanced sinking material flux but was instead reflected in increased dissolved organic carbon concentrations. Hence ocean acidification may induce changes in organic matter partitioning in the upper water column during the low-nitrogen summer period in the Baltic Sea.

Description: Accurate assessment of anthropogenic carbon dioxide (CO2) emissions and their redistribution among the atmosphere, ocean, and terrestrial biosphere is important to better understand the global carbon cycle, support the development of climate policies, and project future climate change. Here we describe data sets and a methodology to quantify all major components of the global carbon budget, including their uncertainties, based on the combination of a range of data, algorithms, statistics, and model estimates and their interpretation by a broad scientific community. We discuss changes compared to previous estimates, consistency within and among components, alongside methodology and data limitations. CO2 emissions from fossil fuel combustion and cement production (EFF) are based on energy statistics and cement production data, respectively, while emissions from land-use change (ELUC), mainly deforestation, are based on combined evidence from land-cover-change data, fire activity associated with deforestation, and models. The global atmospheric CO2 concentration is measured directly and its rate of growth (GATM) is computed from the annual changes in concentration. The mean ocean CO2 sink (SOCEAN) is based on observations from the 1990s, while the annual anomalies and trends are estimated with ocean models. The variability in SOCEAN is evaluated with data products based on surveys of ocean CO2 measurements. The global residual terrestrial CO2 sink (SLAND) is estimated by the difference of the other terms of the global carbon budget and compared to results of independent dynamic global vegetation models forced by observed climate, CO2, and land-cover-change (some including nitrogen–carbon interactions). We compare the mean land and ocean fluxes and their variability to estimates from three atmospheric inverse methods for three broad latitude bands. All uncertainties are reported as ±1σ, reflecting the current capacity to characterise the annual estimates of each component of the global carbon budget. For the last decade available (2004–2013), EFF was 8.9 ± 0.4 GtC yr−1, ELUC 0.9 ± 0.5 GtC yr−1, GATM 4.3 ± 0.1 GtC yr−1, SOCEAN 2.6 ± 0.5 GtC yr−1, and SLAND 2.9 ± 0.8 GtC yr−1. For year 2013 alone, EFF grew to 9.9 ± 0.5 GtC yr−1, 2.3% above 2012, continuing the growth trend in these emissions, ELUC was 0.9 ± 0.5 GtC yr−1, GATM was 5.4 ± 0.2 GtC yr−1, SOCEAN was 2.9 ± 0.5 GtC yr−1, and SLAND was 2.5 ± 0.9 GtC yr−1. GATM was high in 2013, reflecting a steady increase in EFF and smaller and opposite changes between SOCEAN and SLAND compared to the past decade (2004–2013). The global atmospheric CO2 concentration reached 395.31 ± 0.10 ppm averaged over 2013. We estimate that EFF will increase by 2.5% (1.3–3.5%) to 10.1 ± 0.6 GtC in 2014 (37.0 ± 2.2 GtCO2 yr−1), 65% above emissions in 1990, based on projections of world gross domestic product and recent changes in the carbon intensity of the global economy. From this projection of EFF and assumed constant ELUC for 2014, cumulative emissions of CO2 will reach about 545 ± 55 GtC (2000 ± 200 GtCO2) for 1870–2014, about 75% from EFF and 25% from ELUC. This paper documents changes in the methods and data sets used in this new carbon budget compared with previous publications of this living data set (Le Quéré et al., 2013, 2014). All observations presented here can be downloaded from the Carbon Dioxide Information Analysis Center (doi:10.3334/CDIAC/GCP_2014).

Description: Highlights • Calcification rates are stimulated by CO2 and HCO3− and inhibited by H+. • This novel substrate–inhibitor concept is tested with experimental data. • The concept enables us to reconcile conflicting results among laboratory studies. • We illustrate how this physiological concept can be included in ecological theory. • We apply the concept to discuss coccolithophore dispersal in the oceans. Abstract Coccolithophores are a group of unicellular phytoplankton species whose ability to calcify has a profound influence on biogeochemical element cycling. Calcification rates are controlled by a large variety of biotic and abiotic factors. Among these factors, carbonate chemistry has gained considerable attention during the last years as coccolithophores have been identified to be particularly sensitive to ocean acidification. Despite intense research in this area, a general concept harmonizing the numerous and sometimes (seemingly) contradictory responses of coccolithophores to changing carbonate chemistry is still lacking to date. Here, we present the “substrate–inhibitor concept” which describes the dependence of calcification rates on carbonate chemistry speciation. It is based on observations that calcification rate scales positively with bicarbonate (HCO3−), the primary substrate for calcification, and carbon dioxide (CO2), which can limit cell growth, whereas it is inhibited by protons (H+). This concept was implemented in a model equation, tested against experimental data, and then applied to understand and reconcile the diverging responses of coccolithophorid calcification rates to ocean acidification obtained in culture experiments. Furthermore, we (i) discuss how other important calcification-influencing factors (e.g. temperature and light) could be implemented in our concept and (ii) embed it in Hutchinson’s niche theory, thereby providing a framework for how carbonate chemistry-induced changes in calcification rates could be linked with changing coccolithophore abundance in the oceans. Our results suggest that the projected increase of H+ in the near future (next couple of thousand years), paralleled by only a minor increase of inorganic carbon substrate, could impede calcification rates if coccolithophores are unable to fully adapt. However, if calcium carbonate (CaCO3) sediment dissolution and terrestrial weathering begin to increase the oceans’ HCO3− and decrease its H+ concentrations in the far future (10–100 kyears), coccolithophores could find themselves in carbonate chemistry conditions which may be more favorable for calcification than they were before the Anthropocene.

Description: Cold-water corals are important habitat formers in deep-water ecosystems and at high latitudes. Ocean acidification and the resulting change in aragonite saturation are expected to affect these habitats and impact coral growth. Counter to expectations, the impact of saturation changes on the deep water coral Lophelia pertusa has been found to be less than expected, with the species sustaining growth even in undersaturated conditions. However, it is important to know whether such acclimation modifies the skeleton and thus its ecosystem functioning. Here we used Synchrotron X-Ray Tomography and Raman spectroscopy to examine changes in skeleton morphology and fibre orientation. We combined the morphological assessment with boron isotope analysis to determine if changes in growth are related to changes in control of calcification pH. Skeletal morphology is highly variable without clear changes in different saturation states. Raman investigations found no difference in macromorphological skeletal arrangement of early mineralization zones and secondary thickening between the treatments but revealed that the skeletal organic matrix layers were less distinct. The δ11B analyses show that L. pertusa up-regulates the internal calcifying fluid pH (pHcf) during calcification with disregard to ambient seawater pH and suggests that well-fed individuals can sustain a high internal pHcf. This indicates that any extra energetic demand required for calcification at low saturation is not detrimental to the skeletal morphology.

Description: Nitric oxide (NO) is a short-lived intermediate of the oceanic nitrogen cycle, however, due to its high reactivity, measurements of dissolved NO in seawater are rare. Here we present an improved method to determine NO concentrations in discrete seawater samples. The set-up of our system consisted of a chemiluminescence NO analyser connected to a stripping unit. The limit of detection for our method was 5 pmol NO in aqueous solution which translates into 0.25 nmol L−1 when using a 20 mL seawater sample volume. Our method was applied to measure high resolution depth profiles of dissolved NO during a cruise to the eastern tropical South Pacific Ocean. Our method is fast and comparably easy to handle thus it opens the door for deciphering the distribution of NO in the ocean and it facilitates laboratory studies on NO pathways.

Description: Highlights • Aerosol time-series measurements on the Cape Verde reveal seasonal variations • High aerosol loadings in winter at Cape Verde related to dust transport in trade winds • Dust supply during summer originating mainly from the Sahel region • Dust supply during winter originating mainly from the North and West Saharan region • Clay dominant mineral in aerosols over Cape Verde, influencing iron solubility Abstract The North Atlantic receives the largest dust loading of any of the world’s oceans due to its proximity to North African deserts and prevailing wind patterns. The supply of biologically important trace elements and nutrients via aerosols has an important influence on biogeochemical processes and ecosystems in this ocean region. In this study we continuously sampled aerosols between July 2007 and July 2008 at the Cape Verde Atmospheric Observatory (CVAO), which is situated on an island group close to the North African continent and under the Saharan/Sahelian dust outflow path. The aim of our work was to investigate temporal variations in aerosol concentration, composition and sources in the Cape Verde region over a complete seasonal cycle, and for this purpose we undertook mineralogical and chemical (42 elements) analyses of the aerosol samples and air mass back-trajectory calculations. Aerosol samples were also collected during a research cruise in the (sub-) tropical Northeast Atlantic Ocean in January 2008. The concentration of atmospheric Al, a proxy for mineral aerosol concentration, at CVAO was in the range 0.01 – 66.9 μg.m- 3 (maximum on 28-30 January 2008) with a geometric mean of 0.76 μg.m- 3. It showed distinct seasonal variations, with enhanced Al concentrations in winter (geometric mean 1.3 μg.m- 3), and lower concentrations in summer (geometric mean 0.48 μg.m- 3). These observations have been attributed to dust transport occurring in higher altitude air layers and mainly north of the Cape Verde during summer, whilst in winter the dust transport shifts south and occurs in the lower altitude trade winds with consequent greater influence on the Cape Verde region. The elemental composition of the aerosols closely agreed with mean upper crustal abundances, with the exception of elements with pronounced anthropogenic sources (e.g. Zn and Pb) and major constituents of sea water (Na and Mg). Mineral analysis showed that clays were the most abundant mineral fraction throughout the whole sampling period, with an increase in quartz and clays during strong dust events and an associated decrease in calcite. This could have important implications for the estimation of release of for example Fe from mineral dust with clays having a higher Fe solubility than quartz. The elemental composition and mineralogy of aerosol samples collected during the cruise were indistinguishable from those collected at the CVAO during the same period, although mean atmospheric Al was 65% higher at the CVAO than those measured on the ship due to the irregular and uneven nature of dust transport. Air mass back-trajectories showed an important role for southern source regions of the North African deserts during summer, with 92.5% of the samples indicating a contribution from the Sahel. Significantly elevated ratios of V, Ni, Cu, Zn, Cd and Pb with Al were present in samples originating from the Sahel compared with samples with a more northerly origin. This was likely due to enhanced anthropogenic emissions related to the greater population densities in the Sahel compared with the less developed Saharan regions further north. Ratios of other elements and trends in rare earth elements could however not be used to distinguish differences in source regions. Similar source material compositions, the mixing of dust from different regions during transport, and the pooling of samples over a 1-3 day collection period appears to have diluted specific signals from source regions.

Description: The stable carbon isotope composition of dissolved inorganic carbon (δ13CDIC) in seawater was measured in a batch process for 552 samples collected during two cruises in the northeastern Atlantic and Nordic Seas from June to August 2012. One cruise was part of the UK Ocean Acidification research programme, and the other was a repeat hydrographic transect of the Extended Ellett Line. In combination with measurements made of other variables on these and other cruises, these data can be used to constrain the anthropogenic component of dissolved inorganic carbon (DIC) in the interior ocean, and to help to determine the influence of biological carbon uptake on surface ocean carbonate chemistry. The measurements have been processed, quality-controlled and submitted to an in-preparation global compilation of seawater δ13CDIC data, and are available from the British Oceanographic Data Centre. The observed δ13CDIC values fall in a range from g-0.58 to +2.37 ‰, relative to the Vienna Pee Dee Belemnite standard. The mean of the absolute differences between samples collected in duplicate in the same container type during both cruises and measured consecutively is 0.10 ‰, which corresponds to a μ uncertainty of 0.09 ‰, and which is within the range reported by other published studies of this kind. A crossover analysis was performed with nearby historical δ13CDIC data, indicating that any systematic offsets between our measurements and previously published results are negligible. Data doi.org/10.5285/09760a3a-c2b5-250b-e053-6c86abc037c0 (northeastern Atlantic), doi.org/10.5285/09511dd0-51db-0e21-e053-6c86abc09b95 (Nordic Seas).

Description: Marine-produced short-lived trace gases such as dibromomethane (CH2Br2), bromoform (CHBr3), methyliodide (CH3I) and dimethyl sulfide (DMS) significantly impact tropospheric and stratospheric chemistry. Describing their marine emissions in atmospheric chemistry models as accurately as possible is necessary to quantify their impact on ozone depletion and Earth's radiative budget. So far, marine emissions of trace gases have mainly been prescribed from emission climatologies, thus lacking the interaction between the actual state of the atmosphere and the ocean. Here we present simulations with the chemistry climate model EMAC (ECHAM5/MESSy Atmospheric Chemistry) with online calculation of emissions based on surface water concentrations, in contrast to directly prescribed emissions. Considering the actual state of the model atmosphere results in a concentration gradient consistent with model real-time conditions at the ocean surface and in the atmosphere, which determine the direction and magnitude of the computed flux. This method has a number of conceptual and practical benefits, as the modelled emission can respond consistently to changes in sea surface temperature, surface wind speed, sea ice cover and especially atmospheric mixing ratio. This online calculation could enhance, dampen or even invert the fluxes (i.e. deposition instead of emissions) of very short-lived substances (VSLS). We show that differences between prescribing emissions and prescribing concentrations (−28 % for CH2Br2 to +11 % for CHBr3) result mainly from consideration of the actual, time-varying state of the atmosphere. The absolute magnitude of the differences depends mainly on the surface ocean saturation of each particular gas. Comparison to observations from aircraft, ships and ground stations reveals that computing the air–sea flux interactively leads in most of the cases to more accurate atmospheric mixing ratios in the model compared to the computation from prescribed emissions. Calculating emissions online also enables effective testing of different air–sea transfer velocity (k) parameterizations, which was performed here for eight different parameterizations. The testing of these different k values is of special interest for DMS, as recently published parameterizations derived by direct flux measurements using eddy covariance measurements suggest decreasing k values at high wind speeds or a linear relationship with wind speed. Implementing these parameterizations reduces discrepancies in modelled DMS atmospheric mixing ratios and observations by a factor of 1.5 compared to parameterizations with a quadratic or cubic relationship to wind speed.

Description: An approach is proposed to assess hydrological simulation uncertainty originating from internal atmospheric variability. The latter is one of three major factors contributing to uncertainty of simulated climate change projections (along with so-called "forcing" and "climate model" uncertainties). Importantly, the role of internal atmospheric variability is most visible over spatio-temporal scales of water management in large river basins. Internal atmospheric variability is represented by large ensemble simulations (45 members) with the ECHAM5 atmospheric general circulation model. Ensemble simulations are performed using identical prescribed lower boundary conditions (observed sea surface temperature, SST, and sea ice concentration, SIC, for 1979–2012) and constant external forcing parameters but different initial conditions of the atmosphere. The ensemble of bias-corrected ECHAM5 outputs and ensemble averaged ECHAM5 output are used as a distributed input for the ECOMAG and SWAP hydrological models. The corresponding ensembles of runoff hydrographs are calculated for two large rivers of the Arctic basin: the Lena and Northern Dvina rivers. A number of runoff statistics including the mean and the standard deviation of annual, monthly and daily runoff, as well as annual runoff trend, are assessed. Uncertainties of runoff statistics caused by internal atmospheric variability are estimated. It is found that uncertainty of the mean and the standard deviation of runoff has a significant seasonal dependence on the maximum during the periods of spring–summer snowmelt and summer–autumn rainfall floods. Noticeable nonlinearity of the hydrological models' results in the ensemble ECHAM5 output is found most strongly expressed for the Northern Dvina River basin. It is shown that the averaging over ensemble members effectively filters the stochastic term related to internal atmospheric variability. Simulated discharge trends are close to normally distributed around the ensemble mean value, which fits well to empirical estimates and, for the Lena River, indicates that a considerable portion of the observed trend can be externally driven.

Description: Burial of organic carbon in marine sediments has a profound influence in marine biogeochemical cycles and provides a sink for greenhouse gases such as CO2 and CH4. However, tracing organic carbon from primary production sources as well as its transformations in the sediment record remains challenging. Here we examine a novel but growing tool for tracing the biosynthetic origin of amino acid carbon skeletons, based on naturally occurring stable carbon isotope patterns in individual amino acids (δ13CAA). We focus on two important aspects for δ13CAA utility in sedimentary paleoarchives: first, the fidelity of source diagnostic of algal δ13CAA patterns across different oceanographic growth conditions, and second, the ability of δ13CAA patterns to record the degree of subsequent microbial amino acid synthesis after sedimentary burial. Using the marine diatom Thalassiosira weissflogii, we tested under controlled conditions how δ13CAA patterns respond to changing environmental conditions, including light, salinity, temperature, and pH. Our findings show that while differing oceanic growth conditions can change macromolecular cellular composition, δ13CAA isotopic patterns remain largely invariant. These results emphasize that δ13CAA patterns should accurately record biosynthetic sources across widely disparate oceanographic conditions. We also explored how δ13CAA patterns change as a function of age, total nitrogen and organic carbon content after burial, in a marine sediment core from a coastal upwelling area off Peru. Based on the four most informative amino acids for distinguishing between diatom and bacterial sources (i.e., isoleucine, lysine, leucine and tyrosine), bacterially derived amino acids ranged from 10 to 15 % in the sediment layers from the last 5000 years, and up to 35 % during the last glacial period. The greater bacterial contributions in older sediments indicate that bacterial activity and amino acid resynthesis progressed, approximately as a function of sediment age, to a substantially larger degree than suggested by changes in total organic nitrogen and carbon content. It is uncertain whether archaea may have contributed to sedimentary δ13CAA patterns we observe, and controlled culturing studies will be needed to investigate whether δ13CAA patterns can differentiate bacterial from archeal sources. Further research efforts are also needed to understand how closely δ13CAA patterns derived from hydrolyzable amino acids represent total sedimentary proteineincous material, and more broadly sedimentary organic nitrogen. Overall, however, both our culturing and sediment studies suggest that δ13CAA patterns in sediments will represent a novel proxy for understanding both primary production sources, and the direct bacterial role in the ultimate preservation of sedimentary organic matter.

Description: We present new major and trace element, high-precision Sr-Nd-Pb (double spike), and Oisotope data for the whole range of rocks from the Holocene Tolbachik volcanic field in the Central Kamchatka Depression (CKD). The Tolbachik rocks range from high-Mg basalts to low-Mg basaltic trachyandesites. The rocks considered in this paper represent mostly Late Holocene eruptions (using tephrochronological dating), including historic ones in 1941, 1975-1976 and 2012-2013. Major compositional features of the Tolbachik volcanic rocks include the prolonged predominance of one erupted magma type, close association of middle-K primitive and high-K evolved rocks, large variations in incompatible element abundances and ratios but narrow range in isotopic composition. We quantify the conditions of the Tolbachik magma origin and evolution and revise previously proposed models. We conclude that all Tolbachik rocks are genetically related by crystal fractionation of medium-K primary magmas with only a small range in trace element and isotope composition. The primary Tolbachik magmas contain ~14 wt% MgO and ~4% wt% H2O and originated by partial melting (~6%) of moderately depleted mantle peridotite with Indian-MORB-type isotopic composition at temperature of ~1250oC and pressure of ~2 GPa. The melting of the mantle wedge was triggered by slab-derived hydrous melts formed at ~2.8 GPa and ~725oC from a mixture of sediments and MORB- and Meiji- type altered oceanic crust. The primary magmas experienced a complex open-system evolution termed Recharge-Evacuation-Fractional Crystallization (REFC). First the original primary magmas underwent open-system crystal fractionation combined with periodic recharge of the magma chamber with more primitive magma, followed by mixing of both magma types, further fractionation and finally eruption. Evolved high-K basalts, which predominate in the Tolbachik field, and basaltic trachyandesites erupted in 2012-2013 approach steady-state REFC liquid compositions at different eruption or replenishment rates. Intermediate rocks, including high-K, high-Mg basalts, are formed by mixing of the evolved and primitive magmas. Evolution of Tolbachik magmas is associated with large fractionation between incompatible trace elements (e.g., Rb/Ba, La/Nb, Ba/Th) and is strongly controlled by the relative difference in partitioning between crystal and liquid phases. The Tolbachik volcanic field shows that open-system scenarios provide more plausible and precise descriptions of long-lived arc magmatic systems than simpler, but often geologically unrealistic, closed-system models.

Description: Highlights: • Comprehensive morphological, seismic, sedimentological, and geotechnical data sets. • Dynamic CPTU provides a powerful, time- and cost-efficient in situ technique. • Development of a regional sub-seafloor strength model offshore Nice airport. • 2D finite element slope stability assessment gives slope failure depth of 〉 50 m. Abstract: In the landslide-prone area near the Nice international airport, southeastern France, an interdisciplinary approach is applied to develop realistic lithological/geometrical profiles and geotechnical/strength sub-seafloor models. Such models are indispensable for slope stability assessments using limit equilibrium or finite element methods. Regression analyses, based on the undrained shear strength (su) of intact gassy sediments are used to generate a sub-seafloor strength model based on 37 short dynamic and eight long static piezocone penetration tests, and laboratory experiments on one Calypso piston and 10 gravity cores. Significant strength variations were detected when comparing measurements from the shelf and the shelf break, with a significant drop in su to 5.5 kPa being interpreted as a weak zone at a depth between 6.5 and 8.5 m below seafloor (mbsf). Here, a 10% reduction of the in situ total unit weight compared to the surrounding sediments is found to coincide with coarse-grained layers that turn into a weak zone and detachment plane for former and present-day gravitational, retrogressive slide events, as seen in 2D chirp profiles. The combination of high-resolution chirp profiles and comprehensive geotechnical information allows us to compute enhanced 2D finite element slope stability analysis with undrained sediment response compared to previous 2D numerical and 3D limit equilibrium assessments. Those models suggest that significant portions (detachment planes at 20 m or even 55 mbsf) of the Quaternary delta and slope apron deposits may be mobilized. Given that factors of safety are equal or less than 1 when further considering the effect of free gas, a high risk for a landslide event of considerable size off Nice international airport is identified.

Description: Highlights: • We manipulated burial levels and burial durations in a field experiment. • We found strong effects even at low burial level (5 cm) and short duration (4 weeks). • Higher shoot mortality, and delayed growth and flowering, lower carbohydrate storage. • Relative rather than absolute sediment burial levels determined plant survival. • Management implications of our findings are discussed. Seagrass meadows, one of the world's most important and productive coastal habitats, are threatened by a range of anthropogenic actions. Burial of seagrass plants due to coastal activities is one important anthropogenic pressure leading to the decline of local populations. In our study, we assessed the response of eelgrass Zostera marina to sediment burial from physiological, morphological, and population parameters. In a full factorial field experiment, burial level (5–20 cm) and burial duration (4–16 weeks) were manipulated. Negative effects were visible even at the lowest burial level (5 cm) and shortest duration (4 weeks), with increasing effects over time and burial level. Buried seagrasses showed higher shoot mortality, delayed growth and flowering and lower carbohydrate storage. The observed effects will likely have an impact on next year's survival of buried plants. Our results have implications for the management of this important coastal plant.

Description: Highlights: • We unveil regional progressive climate modifications fostering the entire plankton food web. • Hydroclimate shifts have progressively impacted the seasonality of plankton. • The profound plankton reorganization warns on the replacement of local species by cosmopolitan ones. Abstract: Growing evidence has shown a profound modification of plankton communities of the North East Atlantic and adjacent seas over the past decades. This drastic change has been attributed to a modification of the environmental conditions that regulate the dynamics and the spatial distribution of ectothermic species in the ocean. Recently, several studies have highlighted modifications of the regional climate station L4 (50° 15.00′N, 4° 13.02′W) in the Western English Channel. We here focus on the modification of the plankton community by studying the long-term, annual and seasonal changes of five zooplankton groups and eight copepod genera. We detail the main composition and the phenology of the plankton communities during four climatic periods identified at the L4 station: 1988–1994, 1995–2000, 2001–2007 and 2008–2012. Our results show that long-term environmental changes underlined by Molinero et al. (2013) drive a profound restructuration of the plankton community modifying the phenology and the dominance of key planktonic groups including fish larvae. Consequently, the slow but deep modifications detected in the plankton community highlight a climate driven ecosystem shift in the Western English Channel.

Description: Highlights • Sediment influence on hydrate dissolution was studied in the field and lab • In the field, CH4(aq) concentrations were at or below theoretical saturation • Dissolution of natural hydrate blanketed by 15 cm thick sediment was measured • This covered hydrate dissolved at a slower rate than nearby exposed hydrates • In the lab, exposed hydrate dissolved faster than covered hydrate Abstract Dissolution rates of naturally occurring gas hydrates vary by orders of magnitude across studies suggesting that environmental factors may influence hydrate dissolution. To determine the role that sediment cover plays in hydrate dissolution, we used a mini-pore fluid array sampler (mPFA) to continuously collect sediment porewater adjacent to a hydrate outcrop and maintain it at in situ pressure for later analysis. This allowed us to measure in situ dissolved hydrocarbon concentrations in the porewater over time without sample loss due to degassing. We deployed the mPFA at a hydrate outcrop at Barkley Canyon on the Cascadia Margin for nine months. This novel approach yielded concentration data that were used to determine the steady-state dissolution rate of the hydrate outcrop and test predictions of the diffusion-control model for dissolution in the field. In the lab, we conducted a series of experiments with artificial hydrate to directly compare dissolution rates between exposed and sediment-covered hydrate. The dissolution rate of the natural hydrate outcrop covered with sediment was 0.06 cm y− 1. The laboratory experiments of sediment-covered hydrate yielded dissolution rates of 0.6 ± 0.5 cm y− 1 (n = 5). In both laboratory and field observations, the dissolution rate of hydrates exposed directly to bulk water (3.9 ± 1.7 cm y− 1 and 3.5 cm y− 1 respectively) was at least an order of magnitude faster than the dissolution rate of sediment covered hydrate. These results are consistent with expectations of diffusion-control and support this model of hydrate dissolution. In nature, sediment may account for the persistence of hydrate in otherwise methane-depleted environments by increasing the diffusive boundary layer and slowing the rate of molecular diffusion via porosity/tortuosity effects. We provide a number of “Lessons Learned” for improving the instrument design and for consideration during future studies.

Description: Upwelling is an important process, bringing gases and nutrients into the ocean mixed layer. The upwelling velocities, however, are too small to be measured directly. Here we use the surface disequilibrium of the 3He / 4He ratio measured in two coastal upwelling regions off Peru in the Pacific ocean and off Mauritania in the Atlantic ocean to calculate the regional distribution of vertical velocities. To also account for the fluxes by diapycnal mixing, microstructure-based observations of the vertical diffusivity have been performed on all four cruises analysed in this study. The upwelling velocities in the coastal regions vary between 1.1 ± 0.3 × 10−5 and 2.8 ± 1.5 × 10−5 m s−1 for all cruises. Vertical velocities are also inferred from the divergence of the wind-driven Ekman transport. In the coastal regimes, both methods agree within the error range. Further offshore, the helium-derived vertical velocity still reaches 1 × 10−5 m s−1, whereas the wind-driven upwelling from Ekman suction is smaller by up to 1 order of magnitude. One reason for this difference is ascribed to eddy-induced upwelling. Both advective and diffusive nutrient fluxes into the mixed layer are calculated based on the helium-derived vertical velocities and the vertical diffusivities. The advective part of these fluxes makes up at about 50 % of the total. The nutrient flux into the mixed layer in the coastal upwelling regimes is equivalent to a net community production (NCP) of 1.3 ± 0.3 g C m2 d−1 off Peru and 1.6–2.1 ± 0.5 g C m2 d−1 off Mauritania.

Description: We characterise the representation of the Southern Ocean water mass structure and sea ice within a suite of 15 global ocean-ice models run with the Coordinated Ocean-ice Reference Experiment Phase II (CORE-II) protocol. The main focus is the representation of the present (1988-2007) mode and intermediate waters, thus framing an analysis of winter and summer mixed layer depths; temperature, salinity, and potential vorticity structure; and temporal variability of sea ice distributions. We also consider the interannual variability over the same 20 year period. Comparisons are made between models as well as to observation-based analyses where available. The CORE-II models exhibit several biases relative to Southern Ocean observations, including an underestimation of the model mean mixed layer depths of mode and intermediate water masses in March (associated with greater ocean surface heat gain), and an overestimation in September (associated with greater high latitude ocean heat loss and a more northward winter sea-ice extent). In addition, the models have cold and fresh/warm and salty water column biases centred near 50 degrees S. Over the 1933-2007 period, the CORE-II models consistently simulate spatially variable trends in sea-ice concentration, surface freshwater fluxes, mixed layer depths, and 200-700 in ocean heat content. In particular, sea-ice coverage around most of the Antarctic continental shelf is reduced, leading to a cooling and freshening of the near surface waters. The shoaling of the mixed layer is associated with increased surface buoyancy gain, except in the Pacific where sea ice is also influential. The models are in disagreement, despite the common CORE-II atmospheric state, in their spatial pattern of the 20-year trends in the mixed layer depth and sea-ice

Description: Nitrogen (N) and phosphorus (P) availability, in addition to other macro- and micronutrients, determine the strength of the ocean's carbon (C) uptake, and variation in the N : P ratio of inorganic nutrient pools is key to phytoplankton growth. A similarity between C : N : P ratios in the plankton biomass and deep-water nutrients was observed by Alfred C. Redfield around 80 years ago and suggested that biological processes in the surface ocean controlled deep-ocean chemistry. Recent studies have emphasized the role of inorganic N : P ratios in governing biogeochemical processes, particularly the C : N : P ratio in suspended particulate organic matter (POM), with somewhat less attention given to exported POM and dissolved organic matter (DOM). Herein, we extend the discussion on ecosystem C : N : P stoichiometry but also examine temporal variation in stoichiometric relationships. We have analyzed elemental stoichiometry in the suspended POM and total (POM + DOM) organic-matter (TOM) pools in the upper 100 m and in the exported POM and subeuphotic zone (100–500 m) inorganic nutrient pools from the monthly data collected at the Bermuda Atlantic Time-series Study (BATS) site located in the western part of the North Atlantic Ocean. C : N and N : P ratios in TOM were at least twice those in the POM, while C : P ratios were up to 5 times higher in TOM compared to those in the POM. Observed C : N ratios in suspended POM were approximately equal to the canonical Redfield ratio (C : N : P = 106 : 16 : 1), while N : P and C : P ratios in the same pool were more than twice the Redfield ratio. Average N : P ratios in the subsurface inorganic nutrient pool were ~ 26 : 1, squarely between the suspended POM ratio and the Redfield ratio. We have further linked variation in elemental stoichiometry to that of phytoplankton cell abundance observed at the BATS site. Findings from this study suggest that elemental ratios vary with depth in the euphotic zone, mainly due to different growth rates of cyanobacterial cells. We have also examined the role of the Arctic Oscillation on temporal patterns in C : N : P stoichiometry. This study strengthens our understanding of the variability in elemental stoichiometry in different organic-matter pools and should improve biogeochemical models by constraining the range of non-Redfield stoichiometry and the net relative flow of elements between pools.

Description: Genomic sequence data have revealed the presence of a large fraction of putatively silent biosynthetic gene clusters in the genomes of actinomycetes that encode for secondary metabolites, which are not detected under standard fermentation conditions. This review focuses on the effects of biological (co-cultivation), chemical, as well as molecular elicitation on secondary metabolism in actinomycetes. Our review covers the literature until June 2014 and exemplifies the diversity of natural products that have been recovered by such approaches from the phylum Actinobacteria.

Description: The eastern tropical North Atlantic (ETNA) is characterized by a highly productive coastal upwelling system and a moderate oxygen minimum zone with lowest open ocean oxygen (O2) concentrations of around 40 μmol kg−1. Only recently, the discovery of re-occurring mesoscale eddies with sometimes close to anoxic O2 concentrations (〈1 μmol kg−1) and located just below the mixed layer challenged our understanding of O2 distribution and biogeochemical processes in this area. Here, we present the first metagenomic dataset from a deoxygenated anticyclonic modewater eddy in the open waters of the ETNA. In the eddy, we observed a significantly lower bacterial diversity compared to surrounding waters, along with a significant community shift. We detected enhanced primary productivity in the surface layer of the eddy indicated by elevated chlorophyll concentrations and increased carbon uptake rates up to three times as high as in surrounding waters. Carbon uptake below the euphotic zone correlated to the presence of a specific high-light ecotype of Prochlorococcus, which is usually underrepresented in the ETNA. Our combined data indicate that high primary production in the eddy fuels export production and the presence of a specific microbial community responsible for enhanced respiration at shallow depths, below the mixed layer base. Progressively decreasing O2 concentrations in the eddy were found to promote transcription of the key gene for denitrification, nirS, in the O2-depleted core waters. This process is usually absent from the open ETNA waters. In the light of future ocean deoxygenation our results show exemplarily that even distinct events of anoxia have the potential to alter microbial community structures and with that critically impact primary productivity and biogeochemical processes of oceanic water bodies.

Description: Highlights: • Acoustically meaningful clustering correlating with ground truth data • Seascape scale acoustic mapping through classification per beam footprint • Bayesian approach for discriminating sedimentary units with low heterogeneity • Geo-acoustic resolution: a new measure of sedimentary acoustic class separability Modern seafloor mapping is based on high resolution MBES systems that provide detailed bathymetric and acoustic intensity (backscatter) information. We examine and validate the performance of two unsupervised MBES classification techniques for discriminating acoustic classes of sedimentary units with small grain size variability. The first technique, based on a principal components analysis (PCA), is commonly used in literature and has been applied for comparison with the more recent approach of Bayesian statistics. By applying these techniques to a MBES dataset from an estuarine area in The Netherlands, we tested their ability to discriminate fine grained sediments (at least 70% silt) holding small percentages of coarser material such as sand, shell hash or shells. We focus on the Bayesian technique as it outputs acoustically significant classes related to backscatter values. This technique utilizes backscatter values averaged over scatter pixels (projected pulse lengths) inside the footprint of each beam. The originality of our application lies in the fact that, the optimal number of classes is derived by utilizing a number of beams simultaneously. It is assumed that the backscatter values per beam vary relatively to the varying seafloor types. By treating the beams separately, across track variation in the seafloor type can also be accounted for. Thereby the classification is guided by outer, more discriminative beams. Additionally we control the optimal number of classes by employing the quantitative criterion of goodness of fit (χ2). The Bayesian acoustic classes show correlation with grain size parameters such as coarse fraction (〉500μm) percentage and mean of the grain size (〈500μm) when analyzed with multiple linear regression. In order to examine the relative scale of the acoustic classification results we compare the Bayesian acoustic classes with underwater video interpretation. Our results reveal that the Bayesian approach enhances the sedimentological interpretation of MBES high resolution data, by providing classification on seascape scale (here meters to tens of meters). Hence we suggest that backscatter processing techniques are more commonly applied to produce classes that discriminate sediments with low grain size contrast. To describe this ability we introduce the term geoacoustic resolution. We want to encourage the use of the Bayesian technique also in deep sea applications, based on AUV data, where sediments express low variability but sampling would be time consuming and costly. The advantages of this method would favor mapping of macro-habitats which appear at meter-scale and require datasets of sufficient resolution in order to be quantitatively described.

Description: High individual growth and mortality rates of herring Clupea harengus membras and goby Pomatoschistus spp. larvae were observed in the estuarine habitat of the Gulf of Riga, Baltic Sea. Both instantaneous mortality (0.76–1.05) as well as growth rate (0.41–0.82 mm day-1) of larval herring were amongst highest observed elsewhere previously. Mortality rates of goby larvae were also high (0.57–1.05), while first ever data on growth rates were provided in this study (0.23–0.35 mm day-1). Our study also evidenced that higher growth rate of marine fish larvae did not result in lower mortalities. We suggest that high growth and mortality rates primarily resulted from a rapidly increasing and high (〉 18 °C) water temperature that masked potential food-web effects. The explanation for observed patterns lies in the interactive manner temperature contributed: i) facilitating prey production, which supported high growth rate and decreased mortalities; ii) exceeding physiological thermal optimum of larvae, which resulted in decreased growth rate and generally high mortalities. Our investigation suggests that the projected climate warming may have significant effect on early life history stages of the dominating marine fish species inhabiting shallow estuaries

Description: Results from measurements of wave slope statistics during the R/V Meteor M91 cruise in the coastal upwelling regions off the coast of Peru are reported. Wave slope probability distributions were measured with an instrument based on the reflection of light at the water surface and a method very similar to the Cox and Munk (1954b) sun glitter technique. During the cruise, the mean square slope (mss) of the waves was found to be very variable, despite the limited range of encountered wind speeds. The Cox and Munk (1954b) parameterization for clean water is found to overestimate mss, but most measurements fall in the range spanned by their clean water and slick parameterizations. The observed variability of mss is attributed to the wave damping effect of surface films, generated by increased biological production in the upwelling zones. The small footprint and high temporal resolution of the measurement allows for tracking abrupt changes in conditions caused by the often patchy structure of the surface films.

Description: In recent updates of the HITRAN water vapour H2O spectroscopic compilation covering the blue spectral region (here: 394–480 nm) significant changes for the absorption bands at 416 and 426 nm were reported. In order to investigate the consistency of the different cross-sections calculated from these compilations, H2O vapour column density ratios for different spectral intervals were retrieved from long-path and multi-axis differential optical absorption spectroscopy (DOAS) measurements. We observed a significant improvement of the DOAS evaluation when using the updated HITRAN water vapour absorption cross-sections for the calculation of the reference spectra. In particular the magnitudes of the residual spectra as well as the fit errors were reduced. However, we also found that the best match between measurement and model is reached when the absorption cross-section of groups of lines are scaled by factors ranging from 0.5 to 1.9, suggesting that the HITRAN water vapour absorption compilation still needs significant corrections. For this spectral region we present correction factors for HITRAN 2009, HITRAN 2012, HITEMP and BT2 derived from field measurements. Additionally, upper limits for water vapour absorption in the UV-A range from 330 to 390 nm are given.

Description: Highlights • First study using long-term passive acoustic monitoring of methane seeps at well blowout site 22/4b. • Seep acoustic temporal variations correlated with ocean tides. • Major acoustic transient event recorded on 8 December 2011 with high temporal resolution. Abstract Marine seeps produce underwater sounds as a result of bubble formation and fragmentation upon emission from the seabed. The frequency content and sound levels of these emissions are related to bubble size distribution and emission flux, providing important information on methane release from the seafloor. Long-term passive acoustic monitoring was used to continuously record seep sounds over a 7-month period within the blowout crater at the abandoned well site, 22/4b, in the central North Sea. Also recorded were water column fluid velocities and near-seafloor water conductivity, temperature, and pressure. Acoustic signatures were primarily from ∼1 to 10 kHz. Key features were relatively broad spectral peaks at about 1.0, 1.5, 2.2, 3.1, 3.6 and 5.1 kHz. Temporal variations in spectral levels were apparently associated with tides. The recordings also documented a series of major episodic events including a large and persistent increase (∼10 dB) in overall sound levels and spectral broadening on 8 December 2011. The acoustic temporal pattern of this event was consistent with other recorded large transient events in the literature, and the major event was correlated with dramatic changes in other measurements, including increased water column fluid velocities, increased pressure and decreased salinity, indicating real changes in emission flux. Observed seabed morphology changes reported elsewhere in this special issue, also likely were related to this event. These data demonstrate the dynamic nature of marine seepage systems, show the value of monitoring systems, and provide direct supporting evidence for a violent formation mechanism of many widespread seep-associated seabed features like pockmarks.

Description: The sediments of the Santa Barbara Basin (SBB) are an important paleoecological resource since their structure reflects the oxygenation of the bottom waters and the quality and quantity of the particulate matter which is sequestered to the bottom of the basin. These properties are controlled by regional atmospheric and oceanic climate. The California Cooperative Oceanic Fisheries Investigations (CalCOFI) program has been monitoring the bottom waters of the SBB on a regular basis since 1986. Over the last decade, properties of SBB bottom waters have undergone dramatic changes: low concentrations of nitrate were observed more frequently and concentrations of nitrite, at times, reached values of 7 µM, in contrast to maximum concentrations of 0.2 µM observed during the earlier time period. Here we study the links between regional climate and conditions at the bottom of the SBB by relating recent changes in bottom water chemistry to local and regional forcing of the basin. Varying rates of primary production of the overlying water or rates of export production were not significantly related to the observed biogeochemical changes in the basin. Rather, the frequency or rate of flushing, as inferred from phosphate concentration changes at the bottom of the basin, and decreasing concentrations of oxygen in the waters outside the basins could be related to the observed changes. The episodic more than 10-fold increases of nitrite in the bottom waters likely represent a tipping point in the biogeochemical system driven by decreasing concentrations of oxygen in the bottom waters.

Description: In a changing climate, marine pelagic biogeochemistry may modulate the atmospheric concentrations of climate-relevant species such as CO2 and N2O. To date, projections rely on earth system models, featuring simple pelagic biogeochemical model components, embedded into 3-D ocean circulation models. Most of these biogeochemical model components rely on the hyperbolic Michaelis–Menten (MM) formulation which specifies the limiting effect of light and nutrients on carbon assimilation by autotrophic phytoplankton. The respective MM constants, along with other model parameters, of 3-D coupled biogeochemical ocean-circulation models are usually tuned; the parameters are changed until a "reasonable" similarity to observed standing stocks is achieved. Here, we explore with twin experiments (or synthetic "observations") the demands on observations that allow for a more objective estimation of model parameters. We start with parameter retrieval experiments based on "perfect" (synthetic) observations which we distort, step by step, by low-frequency noise to approach realistic conditions. Finally, we confirm our findings with real-world observations. In summary, we find that MM constants are especially hard to constrain because even modest noise (10 %) inherent to observations may hinder the parameter retrieval already. This is of concern since the MM parameters are key to the model's sensitivity to anticipated changes in the external conditions. Furthermore, we illustrate problems caused by high-order parameter dependencies when parameter estimation is based on sparse observations of standing stocks. Somewhat counter to intuition, we find that more observational data can sometimes degrade the ability to constrain certain parameters.

Description: This study focusses on the isopod biodiversity in the abyssal area southeast of the Kuril–Kamchatka Trench. The KuramBio (Kuril–Kamchatka Biodiversity Studies) expedition in summer 2012 collected altogether 10,169 isopods from 21 C-EBS hauls at 12 stations, belonging to 19 families, 73 genera and 207 species from the depth range between 4830 and 5780 m. Munnopsidae and Desmosomatidae were the most abundant and species-rich families, Eurycope (Munnopsidae) and Macrostylis (Macrostylidae) the most abundant genera. An nMDS plot on the basis of the Cosine similarity index reveals no clear pattern and all hauls to be different from each other. We compared our data with 12 stations from the same depth range sampled by the Russian RV Vityaz about 50 years ago and were able to identify several species collected by the RV Vityaz. The identified isopod species belonged to the families Munnopsidae, Macrostylidae, Haploniscidae, Desmosomatidae, Ischnomesidae and Nannoniscidae. Of the 333 individuals collected by the RV Vityaz, Haploniscidae and Munnopsidae were the most abundant families. Desmosomatidae were only represented by 〈1% of the isopod individuals. However, the rarefaction curves of both the KuramBio and the Vityaz samples are not approaching an asymptote, indicating that even after repeated sampling just a part of the local fauna has been recorded so far.

Description: The abyssal macrobenthos of the Kuril–Kamchatka Trench (KKT) area was sampled for the first time using a fine-meshed camera-epibenthic sledge (C-EBS) during the German–Russian KuramBio expedition 2012 (RV Sonne, 223 cruise). Crustaceans of the order Isopoda were one of the dominant macrobenthic taxa, and the family Munnopsidae was the most abundant and diverse among 17 collected asellotan families, comprising about 48% of all isopods. During the KuramBio expedition no less than 80 species of 28 genera and eight subfamilies of Munnopsidae were collected with 21 EBS hauls at 12 stations. About 80% species are new to science and half of the genera and the subfamily Lipomerinae are recorded for the first time in the Northwest Pacific. The most abundant and speciose subfamily was Eurycopinae (58% of all specimens and 29 % of species), followed by Ilyarachninae (12% and 16%). Most species are rare and occur with low abundance at one or few stations. Ten most numerous species belonging to the genera Eurycope (5 species), Microcope (2), Disconectes (1), Ilyarachna (1) and Aspidarachna (1) comprised 68% of all munnopsids. The species Eurycope sp.1 and Microcope ovata ( Birstein, 1970) were the most abundant and frequent species, occurring at all stations. The highest abundance of Munnopsidae and high diversity, with 32 species, occurred at station 3–9 on the western slope of the KKT. The cluster analysis of the Bray–Curtis similarity shows a low similarity between stations. The least similar was station 1-10, with only 26% similarity with other stations. Low similarity also characterized station 3–9 (34%). The comparison with known data revealed differences in species composition of Munnopsidae of the abyssal plain of the KKT area and the fauna of adjacent bathyal and hadal zones. Similar ratios of the munnopsid subfamilies and genera and some similar species have been revealed for the KuramBio and ANDEEP areas.

Description: Highlights: • High-precision glacial–interglacial 87Sr/86Sr record from planktic foraminifera. • Major oceans yield indistinguishable 87Sr/86Sr values at ±5 ppm level of precision. • Foraminifera show no resolvable 87Sr/86Sr variation since last glacial interval. • These data accommodate a ±12% variation for the steady-state weathering flux. • A short-term weathering pulse during de-glaciation is not accommodated by the data. Abstract Existing strontium radiogenic isotope (87Sr/86Sr) measurements for foraminifera over Quaternary glacial–interglacial climate cycles provide no evidence for variations in the isotope composition of seawater at the ±9–13 ppm level of precision. However, modelling suggests that even within this level of uncertainty significant (up to 30%) variations in chemical weathering of the continents are permitted, accounting for the longer-term rise in 87Sr/86Sr over the Quaternary, and the apparent imbalance of Sr in the oceans at the present-day. This study presents very high-precision 87Sr/86Sr isotope data for modern seawater from each of the major oceans, and a glacial–interglacial seawater record preserved by planktic foraminifera from Ocean Drilling Program (ODP) Site 758 in the north-east Indian ocean. Strontium isotope 87Sr/86Sr measurements for modern seawater from the Atlantic, Pacific and Indian Oceans are indistinguishable from one another (87Sr/86Sr = 0.7091792 ± 0.0000021, n=17n=17) at the level of precision obtained in this study (±4.9 ppm 2σ). This observation is consistent with the very long residence time of Sr in seawater, and underpins the utility of this element for high precision isotope stratigraphy. The 87Sr/86Sr seawater record preserved by planktic foraminifera shows no resolvable glacial–interglacial variation (87Sr/86Sr = 0.7091784 ± 0.0000035, n=10n=10), and limits the response of seawater to variations in the chemical weathering flux and/or composition to ±4.9 ppm or less. Calculations suggest that a variation of ±12% around the steady-state weathering flux can be accommodated by the uncertainties obtained here. The new data cannot accommodate a short-term weathering pulse during de-glaciation, although a more a diffuse weathering pulse accompanying protracted ice retreat is permissible. However, these results still indicate that modern weathering fluxes are potentially higher than average over the Quaternary, and such variations through glacial cycles can also account for the longer-term rise in 87Sr/86Sr over this time interval. The very high-precision measurements made for the marine 87Sr/86Sr record in this study place clear limits on the magnitude and timing of changes in the chemical weathering flux during glacial–interglacial cycles. Further, constraints must be sought from even higher precision measurement or elements with shorter residence times in the ocean, such as osmium (Os), that have the capacity to respond to short-term variations in input.

Description: The Baltic is a semi-enclosed sea characterised by decreasing salinity in the eastern and northern direction with only the deeper parts of the southern Baltic suitable as spawning grounds for marine species like cod. Baltic cod exhibits various adaptations to brackish water conditions, yet the inflow of salty North Sea water near the bottom remains an influence on the spawning success of the Baltic cod. The eastern Baltic population has been very weakly studied in comparison with the western population. The aim of this study is to demonstrate for the first time genetic differentiation by the use of a large number of SNPs between eastern and western Baltic populations existing in differentiated salinity conditions. Two cod samples were collected from the Bay of Gdańsk, Poland and one from the Kiel Bight, Germany. Samples were genotyped using a cod derived SNP-array (Illumina) with 10 913 SNPs. A selection of diagnostic SNPs was performed. A set of 7944 validated SNPs were analysed to assess the differentiation of three samples of cod. Results indicated a clear distinctness of the Kiel Bight from the populations of the eastern Baltic. FST comparison between both eastern samples was non-significant. Clustering analysis, principal coordinates analysis and assignment test clearly indicated that the eastern samples should be considered as one subpopulation, well differentiated from the western subpopulation. With the SNP approach, no differentiation between groups containing ‘healthy’ and ‘non-healthy’ cod individuals was observed.

Description: The kinematics of swimming behavior of Atlantic herring larvae cultured under three pCO2 conditions (control - 370, medium - 1800, and high - 4200μatm) were extracted at 34days post-hatch (dph) from swim path recordings obtained using silhouette video photography. The swim paths were analyzed for move duration, speed and length, stop duration, and horizontal and vertical turn angles to determine the effects of elevated pCO2 on fish larval behavior. The swimming kinematics and occurrence of S-postures in Atlantic herring larvae that had survived to 34-dph were unaffected by extremely elevated levels of seawater pCO2, indicating that at least some larvae in the population are resilient to ocean acidification.

Description: The Harris mud crab (Rhithropanopeus harrisii) arrived to the Baltic Sea in 1936. It was not until the late 2000es when the species considerably expanded its distribution area towards the northern Baltic Sea and formed a viable and expanding population. This introduction represents an appearance of a completely new function, as such larger epibenthic predators were previously missing from north-eastern Baltic Sea. In order to assess potential impacts of the crab to the invaded ecosystem, knowledge of the crab habitat preferences is required. This study experimentally evaluated the habitat occupancy of the Harris mud crab. The crab stayed more in vegetated boulders compared to unvegetated boulders or sandy habitats. There was an interactive effect between the presence of prey and crab population density with prey availability increasing the crab's affinity towards less favored habitats when population densities were low. Increased aggression between crab individuals increased their affinity towards otherwise less occupied habitats. Less favored habitats were typically inhabited by smaller individuals and presence of prey increased occupancy of some habitats for larger crabs. The experiment demonstrated that the crab may inhabit a large variety of habitats with stronger affinity towards boulder fields covered with the brown macroalga Fucus vesiculosus. This implies stronger impact of crab in such habitats in the invaded ecosystem.

Description: Air-sea dimethylsulfide (DMS) fluxes and bulk air-sea gradients were measured over the Southern Ocean in February-March 2012 during the Surface Ocean Aerosol Production (SOAP) study. The cruise encountered three distinct phytoplankton bloom regions, consisting of two blooms with moderate DMS levels, and a high biomass, dinoflagellate-dominated bloom with high seawater DMS levels (〉 15 nM). Gas transfer coefficients were considerably scattered at wind speeds above 5 m s-1. Bin averaging the data resulted in a linear relationship between wind speed and mean gas transfer velocity consistent with that previously observed. However, the wind-speed-binned gas transfer data distribution at all wind speeds is positively skewed. The flux and seawater DMS distributions were also positively skewed, which suggests that eddy covariance-derived gas transfer velocities are consistently influenced by additional, log-normal noise. A flux footprint analysis was conducted during a transect into the prevailing wind and through elevated DMS levels in the dinoflagellate bloom. Accounting for the temporal/spatial separation between flux and seawater concentration significantly reduces the scatter in computed transfer velocity. The SOAP gas transfer velocity data show no obvious modification of the gas transfer-wind speed relationship by biological activity or waves. This study highlights the challenges associated with eddy covariance gas transfer measurements in biologically active and heterogeneous bloom environments.

Description: Global models of the oceanic nitrogen cycle are subject to many uncertainties, among them type and form of biogeochemical processes involved in the fixed nitrogen cycle, and the spatial and temporal scales, on which the global nitrogen budget is regulated. We investigate these aspects using a global model of ocean biogeochemistry, that explicitly considers phosphorus and nitrogen, including pelagic denitrification and nitrogen fixation as sink and source terms of fixed nitrogen, respectively. The model explores different parameterizations of organic matter sinking speed, oxidant affinity of oxic and suboxic remineralization, and regulation of nitrogen fixation by temperature and different stoichiometric ratios. Examination of the initial transient behaviour of different model setups initialized from observed tracer distributions reveal changes in simulated nitrogen inventories and fluxes particularly during the first centuries. Millennial timescales have to be resolved in order to bring all biogeochemical and physical processes into a dynamically consistent steady state, for which global patterns of biogeochemical tracers and fluxes are reproduced quite well. Analysis of global properties suggests that particularly particle sinking speed, but also the parameterization of denitrification determines the extent of oxygen minimum zones, global nitrogen fluxes, and hence the oceanic nitrogen inventory. However, the ways and directions, in which different parameterizations of particle sinking, nitrogen fixation and denitrification affect the global diagnostics, are different, suggesting that these may, in principle, be constrained independently from each other. Analysis of the model misfit suggests a particle flux profile close to the one suggested by Martin et al. (1987). Simulated pelagic denitrification best agrees with the lower values between 59 and 84 Tg N yr−1 recently estimated by other authors.

Description: The distribution and speciation of dissolved copper (Cu) was investigated in the Atlantic sector of the Southern Ocean in austral autumn of 2008 as part of the IPY GEOTRACES expedition ZERO & DRAKE. Distribution measurements focused on two transects across the major frontal systems along the Zero Meridian and across the Drake Passage whereas speciation work was investigated in the Drake Passage and the ice covered Weddell Sea. Along the two transects the dissolved Cu concentration exhibited a gradient in the surface with Cu values increasing poleward. Vertical profiles of Cu showed in general monotonic increases with depth, which correlated slightly with silicate but poorly with phosphate. Benthic sources of Cu were observed along the Zero Meridian transect and close to the Antarctic Peninsula for the Drake Passage. Dissolved Cu (DCu) appears to be removed from surface waters through adsorption/complexation by particulate matter. Speciation measurements on DCu indicated a relatively uniform distribution of 25-50nM of L2 (log K ~11.8) class ligands. No L1 class ligands (log K 〉13) were detected in any of the samples examined. Estimates of free Cu (pCu=13.5 to 12.5) showed only small variations in the upper water column and was generally uniform in deep waters. These findings indicate that there is insufficient free copper to account for the rapid reactivity of superoxide (O2 -) with Cu in these waters (Heller and Croot, 2010c) suggesting that the organic Cu complexes present in seawater can undergo rapid redox reactions.

Description: Highlights: • We estimated SST and SSS of the East/Japan Sea over the last 1300 yr. • East Asia monsoon variability has been reconstructed over the period. • A strengthened summer monsoon occurred for the MCA at time of negative PDO. • Asian monsoon failure started at the end of the MCA and extended to the LIA. Abstract: We have reconstructed decadally-resolved continuous sea surface temperature and seawater δ18O (hence salinity) records over the last 1300 yr from alkenone and planktonic foraminiferal oxygen isotope ratio analyses of the East Sea/Japan Sea marine sediments to investigate East Asia monsoon variability. Comparisons of the records with other paleoclimate records indicate a possible connection between changes in the mid-latitude East Asia monsoon and Pacific Decadal Oscillation (PDO) over this period. The results show that during the Medieval Climate Anomaly (MCA) when the PDO index was negative, East Asia was characterized by surface warming with a strengthened summer monsoon. Summer monsoon-related precipitation increased and pluvials possibly dominated in the region at that time. Onset of Asia monsoon failure and severe drought occurred at the end of the MCA and extended to the Little Ice Age (LIA) when the PDO became positive.

Description: Highlights • δ44Ca was measured in bulk carbonate and barite at two sites over the PETM. • Diagenetic effects on δ44Ca are observed associated with ocean acidification. • Multiple sites and proxy archives necessary to reconstruct the past accurately. Abstract Carbonates are used extensively to reconstruct paleoclimate and paleoceanographic conditions over geologic time scales. However, these archives are susceptible to diagenetic alteration via dissolution, recrystallization and secondary precipitation, particularly during ocean acidification events when intense dissolution can occur. Despite the possible effects of diagenesis on proxy fidelity, the impacts of diagenesis on the calcium isotopic composition (δ44Ca) of carbonates are unclear. To shed light on this issue, bulk carbonate δ44Ca was measured at high resolution in two Pacific deep sea sediment cores (ODP Sites 1212 and 1221) with considerably different dissolution histories over the Paleocene–Eocene Thermal Maximum (PETM, ∼55 Ma∼55 Ma). The δ44Ca of marine barite was also measured at the deeper Site 1221, which experienced severe carbonate dissolution during the PETM. Large variations (∼0.8‰∼0.8‰) in bulk carbonate δ44Ca occur in the deeper of the two sites at depths corresponding to the peak carbon isotope excursion, which correlate with a large drop in carbonate weight percent. Such an effect is not observed in either the 1221 barite record or the bulk carbonate record at the shallower Site 1212, which is also less affected by dissolution. We contend that ocean chemical changes associated with abrupt and massive carbon release into the ocean–atmosphere system and subsequent ocean acidification at the PETM affected the bulk carbonate δ44Ca record via diagenesis in the sedimentary column. Such effects are considerable, and need to be taken into account when interpreting Ca isotope data and, potentially, other geochemical proxies over extreme climatic events that drive sediment dissolution.

Description: In remote sensing applications, such as differential optical absorption spectroscopy (DOAS), atmospheric scattering processes need to be considered. After inelastic scattering on N2 and O2 molecules, the scattered photons occur as additional intensity at a different wavelength, effectively leading to filling-in of both solar Fraunhofer lines and absorptions of atmospheric constituents. Measured spectra in passive DOAS applications are typically corrected for rotational Raman scattering (RRS), also called Ring effect, which represents the main contribution to inelastic scattering. In contrast to that, vibrational Raman scattering (VRS) of N2 and O2 has often been thought to be negligible, but also contributes. Consequences of VRS are red-shifted Fraunhofer structures in scattered light spectra and filling-in of Fraunhofer lines, additional to RRS. We describe how to calculate VRS correction spectra in analogy to the Ring spectrum. We discuss further the impact of VRS cross-sections for O2 and N2 on passive DOAS measurements. The relevance of VRS is shown for the first time in spectral evaluations of Multi-Axis DOAS data. This measurement data yields in agreement with calculated scattering cross-sections, that the observed VRS cross-section amounts to 2.2 ± 0.4% of the cross-section of RRS under tropospheric conditions. It is concluded, that this phenomenon has to be included in the spectral evaluation of weak absorbers as it reduces the measurement error significantly and can cause apparent differential optical depth of up to 2.5 × 10−4. Its influence on the spectral retrieval of IO, Glyoxal, water vapour and NO2 in the blue wavelength range is evaluated. For measurements with a large Ring signal a significant and systematic bias of NO2 dSCDs up to (−3.8 ± 0.4) × 1014 molec cm−2 at low elevation angles is observed if this effect is not considered.

Description: Highlights: • We review research since 2005 on potential impacts of leakage from CO2 storage. • We consider near surface onshore and offshore impacts and those on potable groundwaters. • Low level leakage through faults or wells is likely to be limited and recovery rapid. • Effects are reduced by mixing, dispersion and buffering. • Larger leaks are possible but less likely and should be easier to detect and remedy. Abstract: This paper reviews research into the potential environmental impacts of leakage from geological storage of CO2 since the publication of the IPCC Special Report on Carbon Dioxide Capture and Storage in 2005. Possible impacts are considered on onshore (including drinking water aquifers) and offshore ecosystems. The review does not consider direct impacts on man or other land animals from elevated atmospheric CO2 levels. Improvements in our understanding of the potential impacts have come directly from CO2 storage research but have also benefitted from studies of ocean acidification and other impacts on aquifers and onshore near surface ecosystems. Research has included observations at natural CO2 sites, laboratory and field experiments and modelling. Studies to date suggest that the impacts from many lower level fault- or well-related leakage scenarios are likely to be limited spatially and temporarily and recovery may be rapid. The effects are often ameliorated by mixing and dispersion of the leakage and by buffering and other reactions; potentially harmful elements have rarely breached drinking water guidelines. Larger releases, with potentially higher impact, would be possible from open wells or major pipeline leaks but these are of lower probability and should be easier and quicker to detect and remediate.

Description: Resolving drivers of spatial synchrony in marine species is fundamental for the management and conservation of deep-sea ecosystems. Here we examine an 11-year data set of monthly catches per unit of effort (CPUE) of the red-shrimp Aristeus antennatus. These data comprise 16 locations of two population subunits in the Western Mediterranean, the Catalan coast and the Balearic archipelago. The analysis of their seasonal covariation and its space-time structure showed small-scale geographical segregation of locations linked with the seasonal fluctuations of CPUE. Results further revealed that seasonal synchrony dominates at short spatial scales (ca. 50 km), while asynchrony prevails are broader spatial scales (ca. 200-300 km). This spatial pattern, however, varied over the period examined, although it was specific for each population subunit suggesting contrasting drivers of seasonal synchrony. The Balearic Islands, a patchier population subunit, displayed a seasonal synchrony pattern mainly dependent on biological and oceanographic processes at local scales. By contrast, in the Catalan coast, the pattern appeared related with regional-scale climate, which triggers spatial differences in the phenology of primary producers and the timing of food advection to the seabed. These cascading processes depicted by our investigation shed light on underlying mechanisms shaping the temporal synchrony of broadly distributed deep-sea populations.

Description: Highlights • A way to design a grid of sensor along the seafloor, with the purpose of detecting a leak, is presented. • The method relies site characterization, on local environmental statistics and on a detection threshold. • The method quantifies the probability of detecting a leak, and through an optimization procedure finds the optimal layout. • The cost function can be extended to include other constraints, such as cost or need to cover vulnerable areas. Abstract Monitoring of the marine environment for indications of a leak, or precursors of a leak, will be an intrinsic part of any subsea CO2 storage projects. A real challenge will be quantification of the probability of a given monitoring program to detect a leak and to design the program accordingly. The task complicates by the number of pathways to the surface, difficulties to estimate probabilities of leaks and fluxes, and predicting the fluctuating footprint of a leak. The objective is to present a procedure for optimizing the layout of a fixed array of chemical sensors on the seafloor, using the probability of detecting a leak as metric. A synthetic map from the North Sea is used as a basis for probable leakage points, while the spatial footprint is based on results from a General Circulation Model. Compared to an equally spaced array the probability of detecting a leak can be nearly doubled by an optimal placement of the available sensors. It is not necessarily best to place the first in the location of the highest probable leakage point, one sensor can monitor several potential leakage points. The need for a thorough baseline in order to reduce the detection threshold is shown.

Description: Highlights • Repeated 2D seismic reflection surveys map migration of CO2 in marine sediments. • CO2 is imaged as bright spots, acoustic blanking, and by reflector terminations. • Seismic chimneys are interpreted as inter-connected micro-scale fractures. • CO2 migration is controlled by stratigraphy and total subsurface gas volume/injection rate. • CO2 changes sediment acoustic properties, including reflectivity and attenuation. Abstract Carbon capture and storage (CCS) is a key technology to potentially mitigate global warming by reducing carbon dioxide (CO2) emissions from industrial facilities and power generation that escape into the atmosphere. To broaden the usage of geological storage as a viable climate mitigation option, it is vital to understand CO2 behaviour after its injection within a storage reservoir, including its potential migration through overlying sediments, as well as biogeochemical and ecological impacts in the event of leakage. The impacts of a CO2 release were investigated by a controlled release experiment that injected CO2 at a known flux into shallow, under-consolidated marine sediments for 37 days. Repeated high-resolution 2D seismic reflection surveying, both pre-release and syn-release, allows the detection of CO2-related anomalies, including: seismic chimneys; enhanced reflectors within the subsurface; and bubbles within the water column. In addition, reflection coefficient and seismic attenuation values calculated for each repeat survey, allow the impact of CO2 flux on sediment acoustic properties to be comparatively monitored throughout the gas release. CO2 migration is interpreted as being predominantly controlled by sediment stratigraphy in the early stages of the experiment. However, either the increasing flow rate, or the total injected volume become the dominant factors determining CO2 migration later in the experiment.

Description: It has been speculated that macrophytes beds might act as a refuge for calcifiers from ocean acidification. In the shallow nearshores of the western Kiel Bay (Baltic Sea), mussel and seagrass beds are interlacing, forming a mosaic habitat. Naturally, the diverse physiological activities of seagrasses and mussels are affected by seawater carbonate chemistry and they locally modify it in return. Calcification by shellfishes is sensitive to seawater acidity; therefore the photosynthetic activity of seagrasses in confined shallow waters creates favorable chemical conditions to calcification at daytime but turn the habitat less favorable or even corrosive to shells at night. In contrast, mussel respiration releases CO2, turning the environment more favorable for photosynthesis by adjacent seagrasses. At the end of summer, these dynamics are altered by the invasion of high pCO2/low O2 coming from the deep water of the Bay. However, it is in summer that mussel spats settle on the leaves of seagrasses until migrating to the permanent habitat where they will grow adult. These early life phases (larvae/spats) are considered as most sensitive with regard to seawater acidity. So far, the dynamics of CO2 have never been continuously measured during this key period of the year, mostly due to the technological limitations. In this project we used a combination of state-of-the-art technologies and discrete sampling to obtain high-resolution time-series of pCO2 and O2 at the interface between a seagrass and a mussel patch in Kiel Bay in August and September 2013. From these, we derive the entire carbonate chemistry using statistical models. We found the monthly average pCO2 more than 50 % (approx. 640 μatm for August and September) above atmospheric equilibrium right above the mussel patch together with large diel variations of pCO2 within 24 h: 887 ± 331 μatm in August and 742 ± 281 μatm in September (mean ± SD). We observed important daily corrosiveness for calcium carbonates (Ωarag and Ωcalc 〈 1) centered on sunrise. On the positive side, the investigated habitat never suffered from hypoxia during the study period. We emphasize the need for more experiments on the impact of these acidic conditions on (juvenile) mussels with a focus on the distinct day-night variations observed.