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  • Oxford University Press  (266)
  • American Institute of Physics (AIP)  (117)
Collection
  • 1
    Publication Date: 2014-05-09
    Description: Retinitis pigmentosa (RP), a disease characterized by progressive loss of photoreceptors, exhibits significant genetic heterogeneity. Several genes associated with U4/U6–U5 triple small nuclear ribonucleoprotein (tri-snRNP) complex of the spliceosome have been implicated in autosomal dominant RP (adRP). HPrp4, encoded by PRPF4 , regulates the stability of U4/U6 di-snRNP, which is essential for continuous splicing. Here, we identified two heterozygous variants in PRPF4 , including c.-114_-97del in a simplex RP patient and c.C944T (p.Pro315Leu), which co-segregates with disease phenotype in a family with adRP. Both variants were absent in 400 unrelated controls. The c.-114_-97del, predicted to affect two transcription factor binding sites, was shown to down-regulate the promoter activity of PRPF4 by a luciferase assay, and was associated with a significant reduction of PRPF4 expression in the blood cells of the patient. In fibroblasts from an affected individual with the p.Pro315Leu variant, the expression levels of several tri-snRNP components, including PRPF4 itself, were up-regulated, with altered expression pattern of SC35, a spliceosome marker. The same alterations were also observed in cells over expressing hPrp4 Pro315Leu , suggesting that they arose as a compensatory response to a compromised splicing mechanism caused by hPrp4 dysfunction. Further, over expression of hPrp4 Pro315Leu , but not hPrp4 WT , triggered systemic deformities in wild-type zebrafish embryos with the retina primarily affected, and dramatically augmented death rates in morphant embryos, in which orthologous zebrafish prpf4 gene was silenced. We conclude that mutations of PRPF4 cause RP via haploinsufficiency and dominant-negative effects, and establish PRPF4 as a new U4/U6–U5 snRNP component associated with adRP.
    Print ISSN: 0964-6906
    Electronic ISSN: 1460-2083
    Topics: Biology , Medicine
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  • 2
    Publication Date: 2014-07-29
    Description: The novel neutron spectrometer TOFED (Time of Flight Enhanced Diagnostics), comprising 90 individual photomultiplier tubes coupled with 85 plastic scintillation detectors through light guides, has been constructed and installed at Experimental Advanced Superconducting Tokamak. A dedicated magnetic shielding system has been constructed for TOFED, and is designed to guarantee the normal operation of photomultiplier tubes in the stray magnetic field leaking from the tokamak device. Experimental measurements and numerical simulations carried out employing the finite element method are combined to optimize the design of the magnetic shielding system. The system allows detectors to work properly in an external magnetic field of 200 G.
    Print ISSN: 0034-6748
    Electronic ISSN: 1089-7623
    Topics: Electrical Engineering, Measurement and Control Technology , Physics
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  • 3
    Publication Date: 2014-01-07
    Description: ATP-binding cassette transporter A1 (ABCA1) and CD36, type B scavenger receptor, function as the key mediators of macrophages cholesterol efflux and intake, respectively. However, their contribution to development of foam cells still remains uncertain. We here examined the effects of increased oxidized low-density lipoprotein (oxLDL) loading on the ABCA1 and CD36 expression, and lipid accumulation in THP-1 macrophages. The cultured THP-1 macrophages were treated with different copper-oxLDL concentrations. The intracellular lipid contents and cholesterol efflux were measured, and the ABCA1 and CD36 expression were assessed. We found that expression of ABCA1 and CD36 were coordinately induced upon low to moderate doses of oxLDL loading. However, higher doses of oxLDL stimulation resulted in the imbalanced expression of ABCA1 and CD36 proteins with more preferentially suppressed ABCA1 protein, attenuated cholesterol efflux and development of THP-1 derived foam cells. The PPAR- expression was remarkably induced, and PPAR- agonist, pioglitazone, significantly promoted the ABCA1 and CD36 expression. Additionally, ABCA1 and CD36 proteins were strong colocalized in THP-1 macrophages membrane. In conclusion, the more preferentially suppressed ABCA1 expression as compared with CD36 at higher doses of oxLDL stimulation may be the initiator for the formation of macrophage-derived foam cells.
    Print ISSN: 0021-924X
    Electronic ISSN: 1756-2651
    Topics: Biology , Chemistry and Pharmacology
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  • 4
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: Momentum profiles of the valence orbitals of methylpropane, also known as isobutane (CH3CH(CH3)CH3), have been studied by using a high resolution binary (e,2e) electron momentum spectrometer (EMS), at an impact energy of 1200 eV plus the binding energy, and using symmetric noncoplanar kinematics. The coincidence energy resolution of the EMS spectrometer is 0.95 eV full width at half-maximum. The experimental momentum profiles of the valence orbitals are compared with the theoretical momentum distributions calculated using Hartree–Fock (HF) and density functional theory (DFT) methods with the two basis sets of 6-31G and 6-311++G**. The B3LYP functionals are used for the DFT calculations. In general, the experimental momentum distributions are well described by the HF and DFT calculations. The pole strengths of the main ionization peaks from the orbitals in the inner valence are estimated. © 2001 American Institute of Physics.
    Type of Medium: Electronic Resource
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  • 5
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 112 (2000), S. 4111-4117 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: Photoacoustic spectra of the second (3νCH), third (4νCH), and fourth (5νCH) overtones of the methyl C–H stretches in CH3CF2Cl and CH3CFCl2 were measured. The spectra are characterized by a multiple peak structure of partially resolved triplets and quartets with an anomalous linewidth decrease in the 4νCH region. The results are interpreted in terms of a simplified local mode model for C–H stretching vibrations, including also the stretch-deformation Fermi resonances. The model accounts for most spectral features and allows determination of the time scale for vibrational redistribution. © 2000 American Institute of Physics.
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  • 6
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 113 (2000), S. 5134-5137 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: Vibrational preexcitation of a state containing three quanta of C–H stretch (3ν1) results in C–H acetylenic and C–D methyl bond rupture in the ∼243.1 nm photolysis of CD3C(Triple Bond)CH, in contrast to previous observations of the almost isoenergetic 193 nm photodissociation of propynes. The C–D bond fission is the dominant pathway with a D/H branching ratio of 2.0±0.5 at a combined energy of ∼50 830 cm−1. The average translational energies of D and H atoms are nearly identical, although the C–H acetylenic and C–D methyl bond energies differ quite extensively, pointing to different dynamics on the involved potential energy surfaces. © 2000 American Institute of Physics.
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  • 7
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 113 (2000), S. 4837-4839 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: A scanning tunneling microscope was used to perform inelastic electron tunneling spectroscopy on single Cu(II) etioporphyrin-I molecules. The resulting vibrational spectra showed an increase in ac tunneling conductance at 359 mV. This change was attributed to the vibrational excitation of the methene bridge C–H stretch mode. Vibrational microscopy was used to image the spatial distribution of the inelastic tunneling channels involved in this excitation. © 2000 American Institute of Physics.
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  • 8
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 112 (2000), S. 10787-10795 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: Utilizing vibrationally mediated photodissociation of jet-cooled CH3CFCl2 enabled monitoring of the second (3νCH) and third (4νCH) overtones of the methyl in the ground electronic state. The excited molecules are photodissociated by ∼235 or 243.135 nm photons that further tag Cl(2P3/2)[Cl] and Cl(2P1/2)[Cl*] isotopes or H photofragments via mass selective (2+1) resonantly enhanced multiphoton ionization. The vibrational spectra are characterized by a multiple peak structure related to C–H stretches and to Fermi resonating levels involving the CH3 deformation. The cooling in the expansion reduces the rotational and vibrational congestion and affords a determination of the splittings and the upper limits for homogeneous broadening of the transitions. The highest-frequency peak of 4νCH exhibits an additional splitting, related to coupling of the mixed stretch–deformation states with other modes of the molecule. The yield of all three photofragments increases as a result of preexcitation, demonstrating that the energy is not preserved in the excited bond but rather flows to the C–Cl bond. The initial vibrational state preparation not only enhances C–Cl and C–H bond cleavage but also affects the Cl*/Cl branching ratio, as compared to the nearly isoenergetic one-photon 193 nm photolysis of vibrationless ground state CH3CFCl2, implying that it alters the photodissociation dynamics. © 2000 American Institute of Physics.
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  • 9
    Electronic Resource
    Electronic Resource
    [S.l.] : American Institute of Physics (AIP)
    Journal of Applied Physics 89 (2001), S. 2400-2403 
    ISSN: 1089-7550
    Source: AIP Digital Archive
    Topics: Physics
    Notes: Laser ablation of solid substrates in ambient air and under water is investigated. It is found that the laser ablation rate is highly enhanced by the water film. A wide-band microphone is used to detect the audible acoustic wave generated during laser ablation. Peak-to-peak amplitude of the acoustic wave recorded in water confinement regime (WCR) is greater than that recorded in ambient. It is assumed that the plasma generated in WCR induces a much stronger pressure. This high-pressure, high-temperature plasma results in a much higher ablation rate. Theoretical calculation is also carried out to verify this assumption. By proper calibration, acoustic wave detection can be used as a real-time monitoring of the laser ablation. © 2001 American Institute of Physics.
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  • 10
    Electronic Resource
    Electronic Resource
    College Park, Md. : American Institute of Physics (AIP)
    The Journal of Chemical Physics 95 (1991), S. 7348-7355 
    ISSN: 1089-7690
    Source: AIP Digital Archive
    Topics: Physics , Chemistry and Pharmacology
    Notes: This paper reports on a dynamical study of the reaction of an effusive F atom beam with iodine molecules condensed on a temperature-controlled LiF(001) surface. The observation of IF ground state products by laser-induced fluorescence and of IF(A,B) excited species by visible chemiluminescence can be explained by means of a reaction scheme consisting of two channels. In the first channel IF (X 1Σ+) ground state molecules are formed on the surface and desorb into the gas phase above a threshold temperature of about 200 K, where they are probed by laser-induced fluorescence. The vibrational population ratio [N'(v=0)/N'(v=1)] shows equilibrium of the desorbing molecules with the surface. The population distribution of the IF(v=0) rotational manifold can be well-characterized by a rotational temperature which follows the surface temperature. Surface equilibration of products implies that, unlike in the gas phase reaction F+I2, the products have no memory of their exoergic formation, indicating a Langmuir–Hinshelwood mechanism. In a second reaction channel I2F, as the intermediate in the reaction of fluorine atoms with adsorbed iodine molecules, stabilizes at the surface and desorbs into the gas phase above a surface temperature of 300 K. There it reacts with F atoms according to the chemiluminescence process F+I2F→IF*+IF. This gas phase reaction is identified by the exoergicity limit of the IF (B 3Π) state vibrational population distribution, obtained from analysis of the B→X chemiluminescence. In comparison with Kahler and Lee's molecular beam synthesis of I2F from I2 and F2 with subsequent secondary encounter with the product F atom, the above reaction scheme represents an alternative induction of the F+I2F reaction. It can explain visible IF chemiluminescence from fluorine–iodine systems under experimental conditions in which F atoms are present and I2 wall adsorption is possible. In this work, evidence is given that I2F is a common precursor in the two reaction channels. The overall branching ratio strongly favors the formation of IF ground state molecules in these experiments.
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