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  • Genetic variation
  • Iranian Fisheries Science Research Institute  (9)
  • Nature Publishing Group  (1)
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  • 1
    facet.materialart.
    Unknown
    Iranian Fisheries Science Research Institute | Tehran, Iran
    Publication Date: 2021-05-19
    Description: The aim of this study was stablish of gene bank on The Caspian Sea bony fish, identification genetic characterization and population of Barbus brachycephalus caspius, Lucioperca lucioperca , Rutilus rutilus caspius , Rutilus frisi kutum and Salmo trutta caspius in southern part of the Caspian Sea by molecular method (Microsatellites) and formation DNA bank, create of cryopreservation bank of bony fish and the feasibility of creating a natural habitat for spawning of bony fish in the Caspian Sea in order to preserve biodiversity and genetic risk. The results showed that The genetic diversity was significantly different between samples of Golestan (Goegan Gulf), Gilan (Sefidrood, Karganrood and Astara rivers) and Mazandaran (Tajan, Tonekabon, Sardabrood and Chaloos rivers) (p〈0.05) and there were different genetic groups. In addition, DNA bank of these species was carried out. After sperm sampling of Rutilus frisi kutum and Salmo trutta caspius, their quality were tested and some parameters such as motility, duration of mobility, density, pH and osmolality were measured. The results showed that, percentage of motile sperm, timing motility and sperm density of Caspian trout were higher than those of Caspian kutum but osmolality and pH of Caspian trout were lower than those of Caspian kutum. Over time, the percentage of sperm motility and mobility for both species declined compared with fresh samples. After thawing, percentage of motile sperm and timing motility of Caspian kutum were lower than those factors Caspian trout. The results showed that the sample of Caspian kutum sperm that were diluted by ethylene glycol after thawing and were immotile all of them. However, the samples were diluted by glycerol, after thawing, were alive and motile. According to the results, it seems very important species differences that must be fully considered in the process of freezing sperm. The use of a single protocol would not be successful in cryopreservation because the reaction of sperm against to chemical agents is variable. Sampling of physical and chemical parameters of water, macrobenthic invertebrates and fish fauna was conducted seasonally in each rivers (Tajan, Haraz, Sardabrood and Chaloos rivers) at selected stations during one year. A total of 53 taxa of macrobentic invertabrates were identified in the four mentioned rivers. 15 species of fish were determined in the studied rivers that 6 of them were non-native species. All identified fish species were native and the anadermous fish was not catch. The results showed that, the relative abundance of fish species resistant to pollution and hard environmental conditions were much more that sensitive species. Physicochemical parameters of water, turbidity, nutrients, biodiversity, nutrition functioning group and present or absent of fish species showed that there are significant decrease in water qualities from upstream ratio to downstream and there is not any possibility to natural reproduction of migrated species that are dominant and in danger at downstream. In Shahid- Rajaei dam the maximum relative abundance of fish species belonged to Capoeta capoeta, Luciobarbus capito and Squalius cephalus, respectively. The resurvey of this dam and its upstream have been preparing such a favorable condition that seems there are potential of introduction and inhabitant of some of the in danger fish species as a genetic reserve for biodiversity preservation.
    Description: Iranian Fisheries Science Research Institute
    Description: Published
    Keywords: Genetic variation ; Gene bank ; Freezing sperm ; Natural reproduction ; Squalius cephalus ; Luciobarbus capito ; Capoeta capoeta ; Barbus brachycephalus caspius ; Lucioperca lucioperca ; Rutilus rutilus caspius ; Rutilus frisi kutum ; Salmo trutta caspius
    Repository Name: AquaDocs
    Type: Report , Refereed
    Format: 100pp.
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  • 2
    Publication Date: 2022-05-25
    Description: © The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Nature 499 (2013): 209–213, doi:10.1038/nature12221.
    Description: Coccolithophores have influenced the global climate for over 200 million years1. These marine phytoplankton can account for 20 per cent of total carbon fixation in some systems2. They form blooms that can occupy hundreds of thousands of square kilometres and are distinguished by their elegantly sculpted calcium carbonate exoskeletons (coccoliths), rendering them visible from space3. Although coccolithophores export carbon in the form of organic matter and calcite to the sea floor, they also release CO2 in the calcification process. Hence, they have a complex influence on the carbon cycle, driving either CO2 production or uptake, sequestration and export to the deep ocean4. Here we report the first haptophyte reference genome, from the coccolithophore Emiliania huxleyi strain CCMP1516, and sequences from 13 additional isolates. Our analyses reveal a pan genome (core genes plus genes distributed variably between strains) probably supported by an atypical complement of repetitive sequence in the genome. Comparisons across strains demonstrate that E. huxleyi, which has long been considered a single species, harbours extensive genome variability reflected in different metabolic repertoires. Genome variability within this species complex seems to underpin its capacity both to thrive in habitats ranging from the equator to the subarctic and to form large-scale episodic blooms under a wide variety of environmental conditions.
    Description: Joint Genome Institute (JGI) contributions were supported by the Office of Science of the US Department of Energy (DOE) under contract no. 7DE-AC02-05CH11231.
    Keywords: Genetic variation
    Repository Name: Woods Hole Open Access Server
    Type: Article
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    Format: application/vnd.ms-excel
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  • 3
    Publication Date: 2021-07-16
    Description: In this study population genetic structure of Mnemiopsis leidyi were examined by 200 samples from the Caspian Sea. Samples were collected from Guilan province (Astara region), Mazandaran province (Amir Abad region), Golestan province (Gomishan region) and north part of the Caspian Sea. 50 samples were collected from each region. DNA was extracted by phenol - chlorophorm method and its concentration was 50 to 100 nanogram. PCR was performed using 18s rRNA gene. The PCR products of samples were digested by 12 restriction endonuclease enzymes. The digested products accompanied with standard marker (50 bp lader ). In order to measure fragment size samples were run on a 6% vertical polyacrylamide gel. The fragments were visualized by silver staining of the polyacrylamide gel. In this study, Dra I and Alu I enzymes showed different digestion pattern, as each of these enzymes had two genotypes. Other enzymes had similar digestion pattern. RAPD method used by 19 random primers. Ten of nineteen primers showed polymorphism patterns. Statistical analysis of data was performed by Popgene software. In this study, the maximum of genetic variation was in north of the Caspian Sea. Also, the maximum of genetic distance was between north area and Golestan coasts (0.089) and the minimum of genetic distance was between Mazandaran and Guilan coasts (0.001). The UOGMA dendogram showed two clusters. The samples of Mazandaran , Guilan and Golestan coasts placed in one cluster and samples of north area in other cluster The genetic diversity was significantly different between samples of north area and Golestan coasts (p≤0.05). As result, there is a significant genetic divergence between some of samples. Therefore, two genetic group of Mnemiopsis leidyi were identified in the Caspian Sea.
    Keywords: Biology ; Iran ; Caspian Sea ; Guilan province ; Mazandaran province ; Golestan province ; RFLP ; RAPD ; Mnemiopsis leidyi ; Genetic variation ; Population ; Molecular Test ; Samples ; Enzymes ; Genotype
    Repository Name: AquaDocs
    Type: monograph
    Format: application/pdf
    Format: application/pdf
    Format: 47
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  • 4
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    Unknown
    Iranian Fisheries Science Research Institute | Tehran, Iran
    In:  http://aquaticcommons.org/id/eprint/25375 | 18721 | 2018-09-14 07:39:13 | 25375 | Iranian Fisheries Science Research Institute
    Publication Date: 2021-07-16
    Description: Two of the three objectives of project was carried out success that one of them is following: The genetic diversity of Liza salien(Risso,1810) in the south part of Caspian sea using the Mitochondrial DNA sequencing (mtDNA) was carried out as first objective of project that based on the mitochondrial DNA sequencing (mtDNA) of 16S rRNA was used in order to clarify genetic structure and genetic diversity of lizasaliens in three western (Anzali), middle (sari), and eastern (Gomishan lagoon) of south part of Caspian sea. As a result we obtained 552base pairs of 16SrRNA sequence. A total of 6 different haplotypes and 29 variable sites were identified .The average nucleotide diversity(π) and haplotype diversity(h) in samples of all regions were 0.29 , and 0.004 respectively. The results obtained from genetic distance showed low rate in that of 3 regions. Estimates of gene flow indicated there is no reproductive isolation between three regions and also there was not significant genetic differentiation between differentregions (p〉0.05). the findings from the present study suggest that there is equal population of Liza saliens in the studied regions: Genetic differences and phylogenic relationships among six Mugilidae species (Mugilcephalus, M. capito, Liza subviridis, L. saliens, L. aurata, Valamugilbuchanani) were determined using PCR-sequencing as second objective of project. M. cephalus, L. subviridis and V. buchanani from the Persian Gulf and Oman Sea, and L. aurata and L. saliens from the Caspian Sea were collected. Samples of an imported, Egyptian species M. capito (this species was mixed with the main imported species as M. cephalusfingerling) were obtained from the Gomishan Research Center in Gorgan. Total DNA from the samples were extracted according to phenol-chloroform method Mithochondrial DNA ,16s RNA was amplified using thermo cyclermachine with universal primers and thensequenced by sending to Takapoozist Company and thereafter to France. Analysis of the sequences showed great differences between Mugil species and the other studied species. The phylogenetic tree obtained through Neighbor-Joining method revealed that L. saliensand L. aurata were in the same branch while L. subviridis was in a separate branch. In contrast, Maximum Parsimony tree located L. subviridis and L. aurata in a single branch and assigned L. saliens to a distinct branch. This result brings in the question of monophyletic origin of the genus Liza.Also.
    Keywords: Aquaculture ; Iran ; Persian Gulf ; Oman Sea ; Caspian Sea ; Anzali ; Sari ; Gomishan Lagoon ; Mugillidae ; Phylogeny ; Population ; mtDNA ; PCR ; Genetic variation ; Grey mullet ; Mugilcephalus ; Diversity ; M. capito ; Liza subviridis ; L. saliens ; L. aurata
    Repository Name: AquaDocs
    Type: monograph
    Format: application/pdf
    Format: application/pdf
    Format: 118
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  • 5
    Publication Date: 2021-07-16
    Description: Frequently,the development of quantitative traits in livestock based on breeding programs has been more important. In spite of higher selection response in fish than in farm animal, it is no progress in fish breeding programs in some regions such as IRAN, because of little information of genetic variation of stock, disconstructed or undesigned base population, the deterioration of genetic resourse and don’t well informed educated researchers, extension workers and aquaculturist in breeding theory and its practical issues. At first step, in Yasouj Coldwater Fishes Breeding Research Center, in order to conducting combined selection program in rainbow trout broodstock as base population and their off springs in mixed age parents,150 female and male broods with higher mean weight were selected, striped in 6 stage and eggs were incubated. One-year Fishes(45000 pcs.) of the six groups with higher mean weight in 5 stage were selected(438 pcs.) and remainder was discarded. Before selection, a few fishes of six aged-groups as control group were cultured apart. Difference (p〈0.05) induced between mean weight of the selected groups and with control group was because of age difference in them and of no deletion in control group(don’t throw out small individuals) by selection. The whole groups don’t have significant difference (p〉0.05) in FCR and FER. Based on results, it isn’t told that difference between experimental and control groups is a result of genetic improvement of growth rate trait induced of selection process in one generation and the continue of this program for several generations in order to reveal the development of a quantitative trait is unevitable and mating of selected broods (438 fish) in a crossbreeding program and the selection of off springs is essential.
    Keywords: Aquaculture ; Iran ; Yasouj ; Rainbow trout ; Breeding ; Selection ; Broodstock ; Genetic variation ; Genetic ; Growth Rate ; Generation
    Repository Name: AquaDocs
    Type: monograph
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    Format: application/pdf
    Format: 26
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  • 6
    Publication Date: 2021-07-16
    Description: In this study genetic characterization of Barbus brachycephalus caspius, Lucioperca lucioperca, Rutilus rutilus caspius, Rutilus frisi kutum and Salmo trutta caspius were examined by 611 samples from regions in East (Guilan province), Middle (Mazandaran province) and west (Golestan province) of southen part of the Caspian Sea. DNA was extracted from fin tissue by phenol -chlorophorm method and then PCR was performed using special primers. Statistical analysis of data was performed by Gene Alex, MEGA and Arlequin softwares. -Rutilus frisi kutum: The results showed that nine of ten primers were polymorphic loci. The mean of effective and observed alleles were 7.26±0.49 and 4.37±0.35 respectively. Also, the mean of expected and observed heterozygosity were 0.55±0.03 and 0.69±0.02 respectively Of the analysed loci, all of the samples (except Tajan and samples in LOC4 and Gilan samples in MFW2) possible tests were found to deviate significantly from the Hardy–Weinberg equilibrium (P〈0.05). The genetic diversity was significantly different between samples of Golestan and Gilan, Golestan and sefidrood, Golestan and Tajan, Mazandaran and sefidrood and Gilan and Tajan (p〈0.05). -Rutilus rutilus caspius: Sevan variable microsatellite loci were used to investigate genetic diversity and population structure of R. rutilus caspius. The mean of effective and observed alleles were 5.75±0.30 and 4.76±0.25 respectively. Also, the mean of expected and observed heterozygosity were 0.58±0.18 and 0.73±0.01 respectively. All of the samples (except golestan samples in LOC3) possible tests were found to deviate significantly from the Hardy–Weinberg equilibrium (P〈0.05) Of the analysed loci, the genetic divergence was significantly different between samples of Golestan and Gilan, Gilan and Mazandaran and Gilan with Gorgan bay (p〈0.05). -Salmo trutta caspius: Genetic characterization of S. trutta caspius was comparatively analyzed with mitochondrial DNA sequencing that 45 haplotypes was observed. The average of expected and observed heterozygosity were 0.61±0.35 and 0.33±0.12 respectively. The maximum of haplotype diversity (0.089±0.04) was in sardabrood river and the minimum was in Astara river (0.81±0.02). Also, the maximum of nucleotid diversity was 0.13±0.07 in Sardabrood and Chalos rivers and the minimum was 0.11±0.06 in Tonekabon river. In addition, the maximum and minimum of FST was 0.08 and 0.01 respectively. Of the analysed loci, the genetic divergence was significantly different between samples of Astara and Chalos, Astara and Tonekabon, Chalos and Karganrood and Tonekabon with Kaganrood (p〈0.05). - Barbus brachycephalus caspius: The size of amplified fragment was 800 bp in all of the samples. There were 24 variable loci and 12 haplotype that the maximum of haplotype was in Gilan area (8 haplotype). The average of expected and observed heterozygosity were 0.003±0.35 and 0.42±0.12 respectively. The results showed that the haplotype diversity was significantly different between samples of Sefidrood whit other samples (p〈0.05). In addition The maximum of nocleotid diversity was 0.005±0.003 in Sefidrood and minimum was 0.001± 0.001 in Tajan river. Of the analysed loci, the genetic divergence was significantly different between samples of Gilan and Tajan, Mazandaran and Sefidrood (p〈0.05). -Lucioperca lucioperca: The genetic diversity of L. lucioperca was analyzed by using microsatellite markers. Seven primer sequences available for were tested to amplify microsatellite loci that all of loci were polymorphic. The mean of effective and observed alleles were 6.14±0.45 and 3.88±0.34 respectively. Also, the mean of expected and observed heterozygosity were 0.662±0.03 and 0.70±0.02 respectively. The most of samples in PflaL6, PflaL7and PflaL8 loci possible tests were found to deviate significantly from the Hardy–Weinberg equilibrium (P〈0.05). The maximum of FST was 0.30 between Gilan and Mazandaran samples that there were minimum gene flow (8.18). The genetic divergence was significantly different between samples of Gilan and Mazandaran and Golestan whit mazandaran (p〈0.05).
    Keywords: Biology ; Iran ; Caspian Sea ; Genetic variation ; Barbus brachycephalus caspius ; Lucioperca lucioperca ; Rutilus rutilus caspius ; Rutilus frisi kutum ; Salmo trutta caspius ; Identification ; Population ; Genetic ; DNA ; DNA bank ; Molecular ; Microsatellites
    Repository Name: AquaDocs
    Type: monograph
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    Format: 82
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  • 7
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    Unknown
    Iranian Fisheries Science Research Institute | Tehran, Iran
    In:  http://aquaticcommons.org/id/eprint/25777 | 18721 | 2018-10-13 08:20:28 | 25777 | Iranian Fisheries Science Research Institute
    Publication Date: 2021-07-16
    Description: The aim of this study was stablish of gene bank on The Caspian Sea bony fish, identification genetic characterization and population of Barbus brachycephalus caspius, Lucioperca lucioperca, Rutilus rutilus caspius, Rutilus frisi kutum and Salmo trutta caspius in southern part of the Caspian Sea by molecular method (Microsatellites) and formation DNA bank, create of cryopreservation bank of bony fish and the feasibility of creating a natural habitat for spawning of bony fish in the Caspian Sea in order to preserve biodiversity and genetic risk. The results showed that The genetic diversity was significantly different between samples of Golestan (Goegan Gulf), Gilan (Sefidrood, Karganrood and Astara rivers) and Mazandaran (Tajan, Tonekabon, Sardabrood and Chaloos rivers) (p〈0.05) and there were different genetic groups. In addition, DNA bank of these species was carried out. After sperm sampling of Rutilus frisi kutum and Salmo trutta caspius, their quality were tested and some parameters such as motility, duration of mobility, density, pH and osmolality were measured. The results showed that, percentage of motile sperm, timing motility and sperm density of Caspian trout were higher than those of Caspian kutum but osmolality and pH of Caspian trout were lower than those of Caspian kutum. Over time, the percentage of sperm motility and mobility for both species declined compared with fresh samples. After thawing, percentage of motile sperm and timing motility of Caspian kutum were lower than those factors Caspian trout. The results showed that the sample of Caspian kutum sperm that were diluted by ethylene glycol after thawing and were immotile all of them. However, the samples were diluted by glycerol, after thawing, were alive and motile. According to the results, it seems very important species differences that must be fully considered in the process of freezing sperm. The use of a single protocol would not be successful in cryopreservation because the reaction of sperm against to chemical agents is variable. Sampling of physical and chemical parameters of water, macrobenthic invertebrates and fish fauna was conducted seasonally in each rivers (Tajan, Haraz, Sardabrood and Chaloos rivers) at selected stations during one year. A total of 53 taxa of macrobentic invertabrates were identified in the four mentioned rivers. 15 species of fish were determined in the studied rivers that 6 of them were non-native species. All identified fish species were native and the anadermous fish was not catch. The results showed that, the relative abundance of fish species resistant to pollution and hard environmental conditions were much more that sensitive species. Physicochemical parameters of water, turbidity, nutrients, biodiversity, nutrition functioning group and present or absent of fish species showed that there are significant decrease in water qualities from upstream ratio to downstream and there is not any possibility to natural reproduction of migrated species that are dominant and in danger at downstream. In Shahid- Rajaei dam the maximum relative abundance of fish species belonged to Capoeta capoeta, Luciobarbus capito and Squalius cephalus, respectively. The resurvey of this dam and its upstream have been preparing such a favorable condition that seems there are potential of introduction and inhabitant of some of the in danger fish species as a genetic reserve for biodiversity preservation.
    Keywords: Biology ; Iran ; Caspian Sea ; Shahid-Rajaei dam ; Genetic variation ; Gene bank ; Freezing sperm ; Natural reproduction ; Squalius cephalus ; Luciobarbus capito ; Capoeta capoeta ; Barbus brachycephalus caspius ; Lucioperca lucioperca ; Rutilus rutilus caspius ; Rutilus frisi kutum ; Salmo trutta caspius
    Repository Name: AquaDocs
    Type: monograph
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    Format: application/pdf
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  • 8
    facet.materialart.
    Unknown
    Iranian Fisheries Science Research Institute | Tehran, Iran
    In:  http://aquaticcommons.org/id/eprint/25101 | 18721 | 2018-08-23 05:22:05 | 25101 | Iranian Fisheries Science Research Institute
    Publication Date: 2021-07-16
    Description: In this study genetic variation of clupeonidea using restriction fragment length polymorphism (RFLP) of the mtDNA control region. Samples were collected from Amirabad port (50 individuals for each species) and Anzaly port (50 individuals for each species) regions in East and west of southern part of Caspian Sea. DNA was extracted from fin tissue by phenol - chlorophorm method. PCR was performed using D- Loop region, as result PCR product was about 1015 bp in all samples. The PCR products of samples ware digested by 19 restriction endonuclease enzymes. Ten out of nineteen restriction enzyme were polymorphic for D- Loop region. 12 different haplotypes were detected in C. engrauliformis and 9 haplotypes in C. grimmi and C. cultriventris. The mean value of haplotypes diversity among 71 Populations Was 0/786, 0/734, 0/426 and nucleotide diversity was 0/0092, 0/0099 and 0/0079, respectively. The nucleotide divergence among populations in C. engrauliformis, C. caltriventreis and C.grimmi was 0/01%, 0/01% and 0/003%, respectively. The results showed that the hoplotype differences in C. engrauliformis and C. cultriventris were significant (p〈0.01) and in C.grimmi was not significant (p〉0.01).
    Keywords: Biology ; Iran ; Caspian Sea ; Anzali ; Clupeonidae ; C. engrauliformis ; C. caltriventris ; C. grimmi ; mtDNA ; RFLP ; Genetic variation ; Clupeonella caltriventris ; Length ; Enzymes
    Repository Name: AquaDocs
    Type: monograph
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    Format: application/pdf
    Format: 72
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  • 9
    Publication Date: 2021-05-19
    Description: In this study genetic variation of clupeonidea using restriction fragment length polymorphism (RFLP) of the mtDNA control region. Samples were collected from Amirabad port (50 individuals for each species) and Anzaly port (50 individuals for each species) regions in East and west of southern part of Caspian Sea. DNA was extracted from fin tissue by phenol - chlorophorm method. PCR was performed using D- Loop region, as result PCR product was about 1015 bp in all samples. The PCR products of samples ware digested by 19 restriction endonuclease enzymes. Ten out of nineteen restriction enzyme were polymorphic for D- Loop region. 12 different haplotypes were detected in C. engrauliformis and 9 haplotypes in C. grimmi and C. cultriventris. The mean value of haplotypes diversity among 71 Populations Was 0/786, 0/734, 0/426 and nucleotide diversity was 0/0092, 0/0099 and 0/0079, respectively. The nucleotide divergence among populations in C. engrauliformis, C. caltriventreis and C.grimmi was 0/01%, 0/01% and 0/003%, respectively. The results showed that the hoplotype differences in C. engrauliformis and C. cultriventris were significant (p〈0.01) and in C.grimmi was not significant (p〉0.01).
    Description: Iranian Fisheries Science Research Institute
    Description: Published
    Keywords: Clupeonidae ; C. engrauliformis ; C. caltriventris ; C. grimmi ; mtDNA ; RFLP ; Genetic variation ; Clupeonella caltriventris ; Length ; Enzymes
    Repository Name: AquaDocs
    Type: Report , Refereed
    Format: 72pp.
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  • 10
    Publication Date: 2021-05-19
    Description: In this study genetic characterization of Barbus brachycephalus caspius, Lucioperca lucioperca , Rutilus rutilus caspius , Rutilus frisi kutum and Salmo trutta caspius were examined by 611 samples from regions in East (Guilan province), Middle (Mazandaran province) and west (Golestan province) of southen part of the Caspian Sea. DNA was extracted from fin tissue by phenol - chlorophorm method and then PCR was performed using special primers. Statistical analysis of data was performed by Gene Alex, MEGA and Arlequin softwares. - Rutilus frisi kutum: The results showed that nine of ten primers were polymorphic loci. The mean of effective and observed alleles were 7.26±0.49 and 4.37± 0.35 respectively. Also, the mean of expected and observed heterozygosity were 0.55±0.03 and 0.69±0.02 respectively. Of the analysed loci, all of the samples (except Tajan and samples in LOC4 and Gilan samples in MFW2) possible tests were found to deviate significantly from the Hardy–Weinberg equilibrium(P〈0.05). The genetic diversity was significantly different between samples of Golestan and Gilan, Golestan and sefidrood, Golestan and Tajan, Mazandaran and sefidrood and Gilan and Tajan (p〈0.05). - Rutilus rutilus caspius: Sevan variable microsatellite loci were used to investigate genetic diversity and population structure of R. rutilus caspius. The mean of effective and observed alleles were 5.75±0.30 and 4.76± 0.25 respectively. Also, the mean of expected and observed heterozygosity were 0.58±0.18 and 0.73±0.01 respectively. All of the samples (except golestan samples in LOC3) possible tests were found to deviate significantly from the Hardy–Weinberg equilibrium(P〈0.05). Of the analysed loci, the genetic divergence was significantly different between samples of Golestan and Gilan, Gilan and Mazandaran and Gilan with Gorgan bay (p〈0.05). - Salmo trutta caspius: Genetic characterization of S. trutta caspius was comparatively analyzed with mitochondrial DNA sequencing that 45 haplotypes was observed. The average of expected and observed heterozygosity were 0.61±0.35 and 0.33±0.12 respectively. The maximum of haplotype diversity (0.089±0.04) was in sardabrood river and the minimum was in Astara river (0.81±0.02). Also, the maximum of nucleotid diversity was 0.13±0.07 in Sardabrood and Chalos rivers and the minimum was 0.11±0.06 in Tonekabon river. In addition, the maximum and minimum of FST was 0.08 and 0.01 respectively. Of the analysed loci, the genetic divergence was significantly different between samples of Astara and Chalos, Astara and Tonekabon, Chalos and Karganrood and Tonekabon with Kaganrood (p〈0.05). - Barbus brachycephalus caspius: The size of amplified fragment was 800 bp in all of the samples. There were 24 variable loci and 12 haplotype that the maximum of haplotype was in Gilan area (8 haplotype). The average of expected and observed heterozygosity were 0.003±0.35 and 0.42±0.12 respectively. The results showed that the haplotype diversity was significantly different between samples of Sefidrood whit other samples (p〈0.05). In addition The maximum of nocleotid diversity was 0.005±0.003 in Sefidrood and minimum was 0.001± 0.001 in Tajan river. Of the analysed loci, the genetic divergence was significantly different between samples of Gilan and Tajan, Mazandaran and Sefidrood (p〈0.05). - Lucioperca lucioperca: The genetic diversity of L. lucioperca was analyzed by using microsatellite markers. Seven primer sequences available for were tested to amplify microsatellite loci that all of loci were polymorphic. The mean of effective and observed alleles were 6.14±0.45 and 3.88±0.34 respectively. Also, the mean of expected and observed heterozygosity were 0.662±0.03 and 0.70±0.02 respectively. The most of samples in PflaL6 , PflaL7and PflaL8 loci possible tests were found to deviate significantly from the Hardy–Weinberg equilibrium (P〈0.05). The maximum of FST was 0.30 between Gilan and Mazandaran samples that there were minimum gene flow (8.18). The genetic divergence was significantly different between samples of Gilan and Mazandaran and Golestan whit mazandaran (p〈0.05).
    Description: Iranian Fisheries Science Research Institute
    Description: Published
    Keywords: Genetic variation ; Barbus brachycephalus caspius ; Lucioperca lucioperca ; Rutilus rutilus caspius ; Rutilus frisi kutum ; Salmo trutta caspius ; Identification ; Population ; Genetic ; DNA ; DNA bank ; Molecular ; Microsatellites
    Repository Name: AquaDocs
    Type: Report , Refereed
    Format: 82pp.
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