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  • Mutation  (538)
  • Atmosphere-ocean system
  • Salinity
  • American Association for the Advancement of Science (AAAS)  (547)
  • American Meteorological Society  (2)
  • UNESCO  (2)
  • National Institute of Oceanograhy and Fisheries (NIOF)  (1)
  • WOCE Hydrographic Programme Offce, Woods Hole Oceanographic Institution  (1)
  • Springer Nature
  • 2005-2009  (553)
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  • 1
    Publication Date: 2017-04-04
    Description: In this paper results from the application of an ocean data assimilation (ODA) system, combining a multivariate reduced-order optimal interpolator (OI) scheme with a global ocean general circulation model (OGCM), are described. The present ODA system, designed to assimilate in situ temperature and salinity observations, has been used to produce ocean reanalyses for the 1962–2001 period. The impact of assimilating observed hydrographic data on the ocean mean state and temporal variability is evaluated. A special focus of this work is on the ODA system skill in reproducing a realistic ocean salinity state. Results from a hierarchy of different salinity reanalyses, using varying combinations of assimilated data and background error covariance structures, are described. The impact of the space and time resolution of the background error covariance parameterization on salinity is addressed.
    Description: This work has been funded by the ENACT Project (Contract EVK2-CT2001-00117) for A. Bellucci and P. Di Pietro, and partially by the ENSEMBLES Project (Contract GOCE-CT-2003-505539) for A. Bellucci.
    Description: Published
    Description: 3785-3807
    Description: 3.7. Dinamica del clima e dell'oceano
    Description: JCR Journal
    Description: reserved
    Keywords: ocean modelling ; data assimilation ; reanalysis ; upper ocean variability ; temperature ; Salinity ; 03. Hydrosphere::03.01. General::03.01.04. Ocean data assimilation and reanalysis
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: article
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  • 2
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    American Meteorological Society
    Publication Date: 2021-05-19
    Description: Skill in ensemble-mean dynamical seasonal climate hindcasts with a coupled land-atmosphere model and specified observed sea surface temperature is compared to that for long multi-decade integrations of the same model where the initial conditions are far removed from the seasons of validation. The evaluations are performed for surface temperature and compared among all seasons. Skill is found to be higher in the seasonal simulations than the multi-decadal integrations except during boreal winter. The higher skill is prominent even beyond the first month when the direct influence of the atmospheric initial state elevates model skill. Skill is generally found to be lowest during the winter season for the dynamical seasonal forecasts, equal to that of the long integrations, which show some of the highest skill during winter. The reason for the differences in skill during the non-winter months is attributed to the severe climate drift in the long simulations, manifest through errors in downward fluxes of water and energy over land and evident in soil wetness. The drift presses the land surface to extreme dry or wet states over much of the globe, into a range where there is little sensitivity of evaporation to fluctuations in soil moisture. Thus, the land-atmosphere feedback is suppressed, which appears to lessen the model’s ability to respond correctly over land to remote ocean temperature anomalies.
    Description: Center for Ocean-Land-Atmosphere Studies
    Description: Published
    Keywords: Atmosphere-ocean system
    Repository Name: AquaDocs
    Type: Journal Contribution , Refereed , Article
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  • 3
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    National Institute of Oceanograhy and Fisheries (NIOF)
    Publication Date: 2021-05-19
    Description: Bardawil Lagoon is a shallow oligotrophic hypersaline lake, located at the northern periphery of Sinai peninsula-Egypt, connected to SE Mediterranean Sea through two main openings known as Boughazes. Distribution of zooplankton in Bardawil Lagoon during 2004 was studied, not only in space and time but also with reference to species assemblages and environmental factors. Copepoda, Protozoa, and Mollusca were dominating the lagoon zooplankton community during the period of study with 58 identified forma. Zooplankton stock peaked during August and October with severe depletion in spring. Spatially, the maximum density occurred near the sea opening I. The lowest density and species richness were noticed at stations with high salinity. The community composition was highly changed with time series. Twenty new taxa were recorded during the study, whereas thirty three taxa disappeared from the lagoon along twenty years.
    Description: تعتبر جونة البردويل بحيرة عالية الملوحة، فقيرة فى الانتاجية الاولية، وقليلة العمق. وتقع هذه الجونة فى اقصى شمال جزيرة سيناء-مصر. وتتصل بجنوب شرق البحر المتوسط من خلال فتحتين. وقد تمت دراسة توزيع الهائمات الحيوانية خلال عام 2004 شهريا. وسجل 58 نوعا من الهائمات الحيوانية. وكانت مجدافيات الارجل والاوليات الحيوانية والرخويات هى الاكثر سيادة فى البحيرة. وبخاصة فى شهرى أغسطس وأكتوبر، بينما كان هناك فقر كبير فى كثافة هذه الكائنات فى ربيع ذلك العام. كما كانت أعلى كثافة للهائمات الحيوانية فى المحطات القريبة من البوغاز الغربى. وبينت الدراسة ان الملوحة كانت هى العامل المُحدد لتغير كثافة وتنوع الهائمات الحيوانية حيث تناسبت معها عكسيا. ظهر عشرون نوعا فى جونة البردويل أثناءالدراسة لم يتم تسجيلهم من قبل بينما اختفى ثلاثة وثلاثون نوعا على مدار عشرون عاما.
    Description: The Chief Editor: Prof. Fatma Aly Abd El-Razek E-mail: fatma_abdelrazek@hotmail.com
    Description: Published
    Description: Hypersaline lagoon
    Keywords: Hydrobiology ; Zooplankton ; Salinity ; Zooplankton ; Salinity ; Lagoons
    Repository Name: AquaDocs
    Type: Journal Contribution , Refereed , Article
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  • 4
    Publication Date: 2021-05-19
    Description: This document is directed to the scientific research community and users of operational ocean data. It is also intended to provide an example and be a source of information to programmes such as the Global Ocean Observing System (GOOS) for developing and implementing end-to-end data management systems. The document is also directed towards Member States of IOC. It discusses how Member States can make contributions and how they can benefit from the GTSPP.
    Description: Published
    Description: temperature profile, salinity prifile, GTSPP
    Keywords: Oceanography ; Salinity ; Temperature data ; Temperature measurement ; Ocean circulation ; Salinity ; Salinity data ; Salinity measurement ; Salinity profiles ; Salinity scales
    Repository Name: AquaDocs
    Type: Report
    Format: 33
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  • 5
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    UNESCO
    Publication Date: 2021-01-30
    Description: The Integrated Global Observing Strategy Partnership (IGOS-P) established, in 1999, a thematic approach to the implementation of the IGOS. Recognising that other themes will emerge, the “Ocean Theme” was chosen to be the “pathfinder” in this approach and an Ocean Theme Team was assembled to formulate guidance. One goal of the Ocean Theme Team is to consider and study the full range of current and planned observations, while identifying potential gaps in future observations that might compromise ocean observational records. This document presents a proposed set of long-term ocean observations and identifies a number of challenges for the improvement of knowledge about both the oceans and observing techniques. The overall strategy is to create an observing system for the oceans that serves the research and operational oceanographic communities. The set of observations is based on an evaluation of the range of requirements that have already been presented by GOOS, GCOS, and GODAE. The next five years must include development of institutional structures committed to (1) managing the total data flow (in situ as well as satellite); (2) managing the production, distribution and quality assessment of relevant data products; and (3) working with end-users to ensure that the evolving system is responsive to their needs. It is also recognised that observation protocols evolve with time and, therefore, that the stated observational requirements will need to be reviewed in future. It is the recognised applications that ultimately drive the shape of the requirements for the ocean observing system. The observations on which we focus here are needed to address important issues in ocean science, and through combinations of measurements and models, to support the production of an extensive range of products for a broad community of users. The applications are directly linked to societal needs, including among other things numerical weather prediction, seasonal-to-interannual climate forecasts, and climate assessment. The data are needed for deriving fields of information about the ocean and for initialising and validating the models used to derive other products. Aside from observations we also need to improve, through the Global Ocean Data Assimilation Experiment (GODAE) and the Ocean Biology Project, how we assimilate the data into models.
    Description: Published
    Description: Ocean Biology, Ocean topography, Gravity, Geold, atmospheric pressure
    Keywords: Oceanography ; Salinity ; Surface temperature ; Wind vectors ; Sea ice ; Salinity
    Repository Name: AquaDocs
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  • 6
    Publication Date: 2022-05-26
    Description: This report summarizes the work, under the auspices of the WOCE Hydrographic Programme (WHP), which took place on the R/V Akademik Vernadsky in June-July 1991. The goal of the exercise was an international comparison/training cruise to obtain comparisons of water sampling methods and analytical techniques employed by several groups for the oceanographic measurement of salinity and oxygen in seawater. The training aspect was formalized in a pre-cruise practicum held on board the vessel by Dr. Fred Culkin and Mr. Paul Ridout of Ocean Scientific International, the manufacturer of IAPSO Standard Seawater, At-sea comparisons of Russian Reference Water, manufactured in Moscow, were made with IAPSO water. Further work involved comparisons of a Guildline and a pair of SOKOL salinometers using reference water and natural seawater collected on the cruise. While the agreement among the salnometers was quite good and at the level of acceptability for the WHP, it was discovered that lack of thermal equilbration of the salinity samples run on the SOKOLs led to substantial "errors" at large depths (or for cold water samples). This could not have been anticipated before the cruise and would have been missed in a shore-based or laboratory exercise. All five groups making oxygen comparisons benefitted from the technical exchange afforded by the cruise and, as a result of reconciling inter-group differences, have identified procedural changes they wil make in the future in order to achieve the high standards required by the WHP, The technical interaction, which amounted to "training" for all groups, was greatly facilitated by the cooperation of Captain Malnovsky, Chief Scientist Panteleyev, the scientists from MHI, Sevastopol, and the crew of the Vernadsky. On the Vernadsky comparison cruise, a shore-based practicum was held prior to sailing in order to review the theory and measurement of salinity. The cruise itself, which took place between 27 June and 8 July 1991, was in the NE Atlantic to the west of Madeira. An international group of experts in salnity and oxygen measurements was drawn from the United Kingdom (UK), Spain, Russia, Ukraine, and the United States (US). Except for one of the five groups, measured oxygen values in the range of 3-5 mIll (concentration units are used throughout) agreed with one another within :11%, which exceeds the WOCE requirements by a factor of 2. Subsequent analyses of the differences by all five groups could account for much of the observed inter-group variations, Intra-group precision was generally in the range of 0,1-0.4%, As a result, of a low oxygen sparging experiment in which sample oxygens 0: 1.2 mIll were generated, substantial inter-group differences of :1.08 mIll were found indicating that oxygen specifications for WOCE need to be expressed as both a percent "error" and a low oxygen bias. The salinity comparison component of the cruise enabled comparison of various batches of Russian Reference Water (RRW) of various salnities (10, 20, 30, 35 and 40) against IAPSO Standard Seawater (SSW) of various salinities (10, 30, 35 and 38); inferences could then also be drawn on the relative performance of the two types of salinometer (Guildline Autosal 8400 and SOKOL 4602) used during the experiment. Under quasilaboratory conditions, the machines produced mean results different by no more than 0.001 in salinity for salinity 35 RRW, standardizing against salinity 35 SSW. The other salnities produced less conclusive results, but the three salinometers deviated by no more than 0.003 from the expected value over a wide range of salinities. Under operational conditions (analysis of duplicate samples collected from CTD casts) a mean bias emerged between machines of approximately 0.005 in salinity (SOKOL fresher than Guildline), Subsequent investigations tentatively ascribed this bias to non-equilbration of deep (cold) samples in the Russian system.
    Description: Prepared for the National Science Foundation under Grants OCE89-07815, and OCE92-06184, T. Joyce, Principal Investigator; Vetlesen Funds, Woods Hole Oceanographic Institution; and with support from the Intergovernmental Oceanographic Commission.
    Keywords: Vernadsky (Ship) ; World Ocean Circulation Experiment ; Oxygen ; Salinity ; Oceanography ; Measurement
    Repository Name: Woods Hole Open Access Server
    Type: Working Paper
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  • 7
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2006-11-04
    Description: One hundred years ago a small group of psychiatrists described the abnormal protein deposits in the brain that define the most common neurodegenerative diseases. Over the past 25 years, it has become clear that the proteins forming the deposits are central to the disease process. Amyloid-beta and tau make up the plaques and tangles of Alzheimer's disease, where these normally soluble proteins assemble into amyloid-like filaments. Tau inclusions are also found in a number of related disorders. Genetic studies have shown that dysfunction of amyloid-beta or tau is sufficient to cause dementia. The ongoing molecular dissection of the neurodegenerative pathways is expected to lead to a true understanding of disease pathogenesis.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Goedert, Michel -- Spillantini, Maria Grazia -- G0301152/Medical Research Council/United Kingdom -- MC_U105184291/Medical Research Council/United Kingdom -- New York, N.Y. -- Science. 2006 Nov 3;314(5800):777-81.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Laboratory of Molecular Biology, Medical Research Council, Cambridge CB2 2QH, UK. mg@mrc-lmb.cam.ac.uk〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/17082447" target="_blank"〉PubMed〈/a〉
    Keywords: *Alzheimer Disease/genetics/history/metabolism/pathology ; Amyloid beta-Peptides/chemistry/metabolism ; Amyloid beta-Protein Precursor/genetics/metabolism ; Animals ; Apolipoproteins E/genetics ; Brain/pathology ; Brain Chemistry ; History, 20th Century ; Humans ; Mutation ; Neurofibrillary Tangles/chemistry/pathology ; Plaque, Amyloid/chemistry/pathology ; Presenilin-1/genetics/metabolism ; tau Proteins/chemistry/genetics/metabolism
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 8
    Publication Date: 2006-04-22
    Description: Given the considerable challenges to the rapid development of an effective vaccine against influenza, antiviral agents will play an important role as a first-line defense if a new pandemic occurs. The large-scale use of drugs for chemoprophylaxis and treatment will impose strong selection for the evolution of drug-resistant strains. The ensuing transmission of those strains could substantially limit the effectiveness of the drugs as a first-line defense. Summarizing recent data on the rate at which the treatment of influenza infection generates resistance de novo and on the transmission fitness of resistant virus, we discuss possible implications for the epidemiological spread of drug resistance in the context of an established population dynamic model.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Regoes, Roland R -- Bonhoeffer, Sebastian -- New York, N.Y. -- Science. 2006 Apr 21;312(5772):389-91.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Institute of Integrative Biology, ETH Zurich, ETH Zentrum CHN K12.1, Universitatsstrasse 16, CH 8092 Zurich, Switzerland.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/16627735" target="_blank"〉PubMed〈/a〉
    Keywords: Acetamides/pharmacology/therapeutic use ; Amantadine/pharmacology/therapeutic use ; Antiviral Agents/*pharmacology/*therapeutic use ; Computer Simulation ; Disease Outbreaks ; *Drug Resistance, Viral/genetics ; Humans ; Influenza A virus/*drug effects/genetics/pathogenicity ; Influenza, Human/*drug therapy/epidemiology/*prevention & control/virology ; Mathematics ; Models, Biological ; Mutation ; Neuraminidase/antagonists & inhibitors ; Orthomyxoviridae/*drug effects/genetics/pathogenicity ; Oseltamivir ; Population Dynamics
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 9
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2006-05-27
    Description: The allure of the emerging genomic technologies in cancer is their ability to generate new biomarkers that predict how individual cancer patients will respond to various treatments. However, productive implementation of cancer biomarkers into patient care will require fundamental changes in how we consider approvals for cancer indications and how we track patient responses. Here we briefly describe ongoing efforts to identify and to validate cancer biomarkers, discuss the technological hurdles that lie ahead, and then focus on the more pressing political and cultural issues that, if left unheeded, could derail many of the anticipated benefits of biomarker research.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Dalton, William S -- Friend, Stephen H -- New York, N.Y. -- Science. 2006 May 26;312(5777):1165-8.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉H. Lee Moffitt Cancer Center, University of South Florida, Tampa, FL 33613, USA. dalton@moffitt.usf.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/16728629" target="_blank"〉PubMed〈/a〉
    Keywords: Academies and Institutes ; *Biomarkers, Tumor ; Biotechnology ; Clinical Trials as Topic ; Databases, Factual ; Drug Industry ; Gene Expression Regulation, Neoplastic ; Genomics ; Humans ; Intellectual Property ; Interprofessional Relations ; Mutation ; Neoplasms/genetics/*therapy ; *Patient Care Management ; Private Sector ; Proteomics ; Public Sector
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 10
    Publication Date: 2006-04-01
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Stokstad, Erik -- New York, N.Y. -- Science. 2006 Mar 31;311(5769):1847.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/16574828" target="_blank"〉PubMed〈/a〉
    Keywords: Breast Neoplasms/*genetics ; DNA Mutational Analysis ; False Negative Reactions ; Female ; *Genes, BRCA1 ; *Genes, BRCA2 ; *Genetic Testing ; Humans ; Mutation ; Nucleic Acid Amplification Techniques ; Ovarian Neoplasms/*genetics ; Sensitivity and Specificity
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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