ALBERT

Description: A multiproxy study of palaeoceanographic and climatic changes in northernmost Baffin Bay shows that major environmental changes have occurred since the deglaciation of the area at about 12 500 cal. yr BP. The interpretation is based on sedimentology, benthic and planktonic foraminifera and their isotopic composition, as well as diatom assemblages in the sedimentary records at two core sites, one located in the deeper central part of northernmost Baffin Bay and one in a separate trough closer to the Greenland coast. A revised chronology for the two records is established on the basis of 15 previously published AMS 14C age determinations. A basal diamicton is overlain by laminated, fossil-free sediments. Our data from the early part of the fossiliferous record (12 300–11 300 cal. yr BP), which is also initially laminated, indicate extensive seasonal sea-ice cover and brine release. There is indication of a cooling event between 11 300 and 10 900 cal. yr BP, and maximum Atlantic Water influence occurred between 10 900 and 8200 cal. yr BP (no sediment recovery between 8200 and 7300 cal. yr BP). A gradual, but fluctuating, increase in sea-ice cover is seen after 7300 cal. yr BP. Sea-ice diatoms were particularly abundant in the central part of northernmost Baffin Bay, presumably due to the inflow of Polar waters from the Arctic Ocean, and less sea ice occurred at the near-coastal site, which was under continuous influence of the West Greenland Current. Our data from the deep, central part show a fluctuating degree of upwelling after c. 7300 cal. yr BP, culminating between 4000 and 3050 cal. yr BP. There was a gradual increase in the influence of cold bottom waters from the Arctic Ocean after about 3050 cal. yr BP, when agglutinated foraminifera became abundant. A superimposed short-term change in the sea-surface proxies is correlated with the Little Ice Age cooling.

Description: The cartilaginous tubercles of the mantle of the squid Cranchia scabra have been examined with the scanning electron microscope. Some tubercles are small, simple nodules whereas others are large with a complex Maltese cross form. The varying shapes and sizes probably represent a developmental sequence. The possible role of the tubercles is discussed.

Description: Investigations indicate that the Iceland Ice Sheet was reduced in size during MIS 3 but readvanced to the shelf break at the LGM. Retreat occurred very rapidly around 15 k–16 k cal. yr BP. By contrast, the margin of the ice sheet on the East Greenland shelf, north of the Denmark Strait, was at or close to the shelf break during MIS 3 and 2 and retreat starting ∼17 k cal. yr BP. Quantitative X-ray diffraction analysis of the 〈2 mm sediment fraction was undertaken on 161 samples from Iceland and East Greenland diamictons, and from cores on the slopes and margins of the Denmark Strait. Weight% mineralogical data are used in a principal component analysis to differentiate sediments derived from the two margins. The first two PC axes explain 52% of the variance. These associations are used to characterise sediments as being affiliated with (a) Iceland, (b) East Greenland or (c) mixed. The contribution from Iceland becomes prominent during MIS 2. The extensive outcrop of early Tertiary basalts on East Greenland between 68° and 71° N is an alternative source for basaltic clasts and North Atlantic sediments with εNd(0) values close to ±0.

Description: The diet composition of Emperor Penguin Aptenodytes forsteri chicks was examined at Auster and Taylor Glacier colonies, near Australia's Mawson station, Antarctica, between hatching in mid-winter and fledging in mid-summer by “water-offloading” adults. Chicks at both colonies were fed a similar suite of prey species. Crustaceans occurred in 82% of stomach samples at Auster and 87% of stomachs at Taylor Glacier and were heavily digested: their contribution to food mass could not be quantified. Fish, primarily bentho-pelagic species, accounted for 52% by number and 55% by mass of chick diet at Auster, and squid formed the remainder. At Taylor Glacier the corresponding values were 27% by number and 31% by mass of fish and 73% by number and 69% by mass of squid. Of the 33 species or taxa identified, the fish Trematomus eulepidotus and the squid Psychroteuthis glacialis and Allu-roteuthis antarcticus accounted for 64% and 74% of the diets by mass at Auster and Taylor Glacier, respectively. The sizes of fish varied temporally but not in a linear manner from winter to summer. Adult penguins captured fish ranging in length from 60 mm (Pfeura-gramma antarcticum) to 250 mm (T. eulepidotus) and squid (P. glacialis) from 19 to 280 mm in mantle length. The length-frequency distribution of P. glacialis showed seasonal variation, with the size of squid increasing from winter to summer. The energy density of chick diet mix increased significantly prior to “fledging”.

Description: The Denmark Strait Overflow (DSO) today compensates for the northward flowing Norwegian and Irminger branches of the North Atlantic Current that drive the Nordic heat pump. During the Last Glacial Maximum (LGM), ice sheets constricted the Denmark Strait aperture in addition to ice eustatic/isostatic effects which reduced its depth (today ∼630 m) by ∼130 m. These factors, combined with a reduced north-south density gradient of the water-masses, are expected to have restricted or even reversed the LGM DSO intensity. To better constrain these boundary conditions, we present a first reconstruction of the glacial DSO, using four new and four published epibenthic and planktic stable-isotope records from sites to the north and south of the Denmark Strait. The spatial and temporal distribution of epibenthic δ18O and δ13C maxima reveals a north-south density gradient at intermediate water depths from σ0∼28.7 to 28.4/28.1 and suggests that dense and highly ventilated water was convected in the Nordic Seas during the LGM. However, extremely high epibenthic δ13C values on top of the Mid-Atlantic Ridge document a further convection cell of Glacial North Atlantic Intermediate Water to the south of Iceland, which, however, was marked by much lower density (σ0∼28.1) The north-south gradient of water density possibly implied that the glacial DSO was directed to the south like today and fed Glacial North Atlantic Deep Water that has underthrusted the Glacial North Atlantic Intermediate Water in the Irminger Basin.

Description: Many of the difficulties of staining plastic embedded tissues for light and electron microscopy derive from physical exclusion of hydrophilic staining reagents by hydrophobic embedding media. Structures which stain most intensely with hydrophilic reagents usually contain less hydrophobic plastic than do non-staining structures. Such incomplete infiltration is apparently caused by exclusion of viscous, hydrophobic monomers by physically dense and/or well hydrated tissue elements. In keeping with this, generalized staining of tissues embedded in hydrophobic media does occur when hydrophobic reagents are used. Staining of plastic-free structures with single hydrophilic reagents or with sequences of such reagents, is, however, largely rate-controlled. The surprising similarity of hydrophilic and hydrophobic plastic embedding media is discussed. Limits of this simple model are explored, with a consideration of the roles of fixative and of monomer-tissue reactions

Description: Two cores were recovered in the southeastern part of Lake Shkodra (Montenegro and Albania) and sampled for identification of tephra layers. The first core (SK13, 7.8 m long) was recovered from a water depth of 7 m, while the second core (SK19, 5.8 m long) was recovered close to the present-day shoreline (water depth of 2 m). Magnetic susceptibility investigations show generally low values with some peaks that in some cases are related to tephra layers. Naked-eye inspection of the cores allowed the identification of four tephra layers in core SK13 and five tephra layers in core SK19. Major element analyses on glass shards and mineral phases allowed correlation of the tephra layers between the two cores, and their attribution to six different Holocene explosive eruptions of southern Italy volcanoes. Two tephra layers have under-saturated composition of glass shards (foiditic and phonolitic) and were correlated to the AD 472 and the Avellino (ca. 3.9 cal. ka BP) eruptions of Somma-Vesuvius. One tephra layer has benmoreitic composition and was correlated to the FL eruption of Mount Etna (ca. 3.4 cal. ka BP). The other three tephra layers have trachytic composition and were correlated to Astroni (ca. 4.2 cal. ka BP), Agnano Monte Spina (ca. 4.5 cal. ka BP) and Agnano Pomici Principali (ca. 12.3 cal. ka BP) eruptions of Campi Flegrei. The ages of tephra layers are in broad agreement with eight 14C accelerator mass spectrometric measurements carried out on plant remains and charcoal from the lake sediments at different depths along the two cores. The recognition of distal tephra layers from Italian volcanoes allowed the physical link of the Holocene archive of Lake Shkodra to other archives located in the central Mediterranean area and the Balkans (i.e. Lake Ohrid). Five of the recognised tephra layers were recognised for the first time in the Balkans area, and this has relevance for volcanic hazard assessment and for ash dispersal forecasting in case of renewed explosive activity from some of the southern Italy volcanoes. Copyright © 2009 John Wiley & Sons, Ltd.

Description: The supply of limiting nutrients to the low latitude ocean is controlled by physical processes linked to climate variations, but methods for reconstructing past nutrient concentrations in the surface ocean are few and indirect. Here, we present laser ablation mass spectrometry results that reveal annual cycles of P/Ca in a 4-year record from the scleractinian coral Pavona gigantea (mean P/Ca = 118 μmol mol−1). The P/Ca cycles track variations in past seawater phosphate concentration synchronously with skeletal Sr/Ca-derived temperature variations associated with seasonal upwelling in the Gulf of Panamá. Skeletal P/Ca varies seasonally by 2–3 fold, reflecting the timing and magnitude of dissolved phosphate variations. Solution cleaning experiments on drilled coral powders show that over 60% of skeletal P occurs in intracrystalline organic phases. Coral skeleton P/Ca holds promise as a proxy record of nutrient availability on time scales of decades to millennia.

Description: Quantitation of nucleic acids is a fundamental tool in molecular biology that requires accuracy, reliability, and the use of increasingly smaller sample volumes. This unit describes the traditional absorbance measurement at 260 nm and three more sensitive fluorescence techniques, as well as three microvolume methods that use fiber optic technology in specialized cells or instrumentation. These procedures allow quantitation of DNA solutions ranging from 1 pg/µl to 50 mg/ml.

Description: In contrast to continuum systems where localization or shear banding arises through a bifurcation in a predefined system of differential equations, shear bands emerge in numerical simulations of deforming granular systems with no prescribed mathematical relations other than simple contact forces between particles. Shear bands emerge from the self‐organization of large numbers of particles with long‐range geometrical interactions playing a dominant role; both translation and rotation of particles are important. Granular media therefore deform more like materials with non‐local constitutive relations than materials where only first‐order interactions are relevant. In this paper we adopt a thermo‐mechanical approach and explore the fluxes of energy in the evolving granular system (that has cohesion as well as friction between the particles) as it is loaded through the unstable localization regime, and track the evolution of energy dissipation. As in continua, the sign of the second‐order work defines the emergence of instability in the system. Initially, these instabilities decay into stable configurations of particles but with continued loading, force chains collapse locally to generate geometrically necessary fractures. These zones then propagate to generate localization zones. When these fractures form a continuous network, the system is at the percolation thresh‐hold for broken bonds. However, long before this stage, the second‐order work fluctuates in bursts weakly correlated with bursts in kinetic energy as damage accumulates. This behaviour suggests that any continuum constitutive description of granular media must be (i) non‐local in an anisotropic manner, (ii) micro‐polar, and (iii) involve damage evolution.

Description: This paper presents a temperature reconstruction of the past 1000 years for Central Europe, based on chronological records. The advantages and limitations of this hermeneutic, text-based approach are discussed and the statistic methodology is introduced. Historical documents represent direct observation of weather and atmospheric conditions with highest temporal resolution available and precise dating. A major advantage of these extensive data is that they allow the reconstruction of large numbers of variables such as winter temperature, precipitation, pressure patterns or climate extremes as well as floods or storms. Within this hermeneutic climatological research approach, even human impacts and social dimensions of climate development can be examined. In order to quantify the historical information, statistical methods are applied, based on an index approach.

Description: Samples collected at hourly intervals on May 18–19, 1980, at three sites 200 km downwind from Mount St. Helens, have made possible a detailed reconstruction of the conditions that contribute to the compositional heterogeneity of mineral and glass components observed in distal tephra layers. The air fall tephra deposited at the sites during the first 7 hours of the May 18 eruption is mostly coarse grained, microlite-rich, nonjuvenile glass and feldspar. Grain-size maxima in this initial tephra can be related to the cataclysmic blast at 0832 and a subsequent pulse of the eruption at 1200. Juvenile, microlite-free glass increases in relative abundance at the sampling sites beginning at about 1900. Such a change between nonjuvenile and juvenile tephra can be related to a 5-km increase in column height associated with the last major pulse of the eruption which occurred at 1700 at the volcano. Electron microprobe study of both microlite-rich and microlite-free pumice in the time series samples reveals significant compositional differences. Interstitial glass in nonjuvenile pumice deposited during the first few hours at the sampling sites is enriched in SiO2 and K2O and depleted in TiO2, FeO*, and MgO relative to juvenile glass. By comparison, major element composition of the least evolved juvenile glass sampled during the last several hours of the eruption displays a slight trend toward less evolved composition. Least squares calculations suggest that the more evolved character of the nonjuvenile glass can be explained by greater fractional crystallization brought about by enhanced cooling in a cryptodome prior to eruption, whereas the temporal changes observed in juvenile glass composition during the last several hours of the eruption suggest the presence of a small, slightly zoned magma chamber at depth. Electron microprobe study of glass-coated ilmenites, magnetites, and plagioclases provides the following estimates of the physical conditions in this reservoir: 865°±50°C, PH2O = 2.2 kbar and -log ƒO2 = 11.7. Analyses of bulk pumice, glass and selected mineral phases from May 25, June 12, July 22, and October 16–18 pumices erupted from Mount St. Helens indicate that the bulk pumice (magma) compositions have become slightly more andesitic with time, while mineral and co-existing glass compositions have changed significantly in post-May 18 eruptions with both being more highly evolved than those associated with the May 18 eruption. An application of the magnetite-ilmenite geothermometer to June 12 and July 22 samples indicates temperatures of 919°±30°C and 930°±50°C, respectively. Least squares calculations suggest that such evolved post-May 18 glass and mineral phases can be derived by fractional crystallization of a magma composition like bulk May 18 pumice into approximately 50% crystals and 50% residual liquid. Such partitioning between crystals and residual liquid appears to have occurred on the scale of centimeters and is interpreted as a consequence of accelerated crystallization under reduced water pressure.

Description: The dry weight and the crest length of the upper and lower beak, the length of the radula ribbon, the average width of the base of the six proximal and distal rachidian teeth as well as the total number of these teeth have all been related to the live body weight of octopuses between 1.1 and 4440 g. From any one of these parameters it is possible to estimate the size and approximate age of the animal.

Description: Features of the brain of this oceanic squid have been investigated and related, as far as possible, to its habits and mode of life. The body and arms are much vacuolated for buoyancy and the animal probably lives with the head upwards. The very long whip-like tentacles are not vacuolated and perhaps hang downwards. They are covered by numerous minute pedunculated suckers, perhaps providing a sticky surface. A special nerve running outside the brain carries signals from the arms and tentacles to the magnocellular lobe, which is very large and of complex structure. However, there are no giant cells and the mantle is weak. Propulsion is mainly by the large fins, which are controlled from the magnocellular lobe, presumably using the information from the arms and tentacles.

Description: The well-known caldera of Thira (Santorini), Greece, was not formed during a single eruption but is composed of two overlapping calderas superimposed upon a complex volcanic field that developed along a NE trending line of vents. Before the Minoan eruption of 1400 B.C., Thira consisted of three Java shields in the northern half of the island and a flooded depression surrounded by tuff deposits in the southern half. Andesitic lavas formed the overlapping shields of the north and were contemporaneous with and, in many places, interbedded with the southern tuff deposits. Although there appears to be little difference between the composition of magmas erupted, differences in eruption style indicate that most of the activity in the northern half of the volcanic field was subaerial, producing lava flows, whereas in the south, eruptions within a flooded depression produced a sequence of mostly phreatomagmatic tuffs. Many of these tuffs are plastered onto the walls of what appears to have been an older caldera, most probably associated with an eruption of rhyodacitic tephra 100,000 years ago. The Minoan eruption of about 1400 B.C. had four distinct phases, each reflecting a different vent geometry and eruption mechanism. The Minoan activity was preceded by minor eruptions of fine ash. (1) The eruption began with a Plinian phase, from subaerial vent(s) located on the easternmost of the lava shields. (2) Vent(s) grew toward the SW into the flooded depression. Subsequent activity deposited large-scale base surge deposits during vent widening by phreatomagmatic activity. (3) The third eruptive phase was also phreatomagmatic and produced 60% of the volume of the Minoan Tuff. This activity was nearly continuous and formed a large featureless tuff ring with poorly defined bedding. This deposit contains 5–40% lithic fragments that are typical of the westernmost lava shield and appears to have been erupted when caldera collapse began. (4) The last phase consisted of eruption of ignimbrites from vent(s) on the eastern shield, not yet involved in collapse. Collapse continued after eruption of the ignimbrites with foundering of the eastern half of the caldera. Total volume of the collapse was about 19 km3, overlapping the older caldera to form the caldera complex visible today. Intracaldera eruptions have formed the Kameni Islands along linear vents concomitant with vents that may have been sources for the Minoan Tuff.

Description: Meiobenthos densities and higher taxon composition were studied in an active gas seepage area at depths from 182 to 252 m in the submarine Dnieper Canyon located in the northwestern part of the Black Sea. The meiobenthos was represented by Ciliata, Foraminifera, Nematoda, Polychaeta, Bivalvia, Gastropoda, Amphipoda, and Acarina. Also present in the sediment samples were juvenile stages of Copepoda and Cladocera which may be of planktonic origin. Nematoda and Foraminifera were the dominant groups. The abundance of the meiobenthos varied between 2397 and 52,593 ind.·m−2. Maximum densities of Nematoda and Foraminifera were recorded in the upper sediment layer of a permanent H2S zone at depths from 220 to 250 m. This dense concentration of meiobenthos was found in an area where intense methane seeps were covered by methane-oxidizing microbial mats. Results suggest that methane and its microbial oxidation products are the factors responsible for the presence of a highly sulfidic and biologically productive zone characterized by specially adapted benthic groups. At the same time, an inverse correlation was found between meiofauna densities and methane concentrations in the uppermost sediment layers. The hypothesis is that the concentration of Nematoda and Foraminifera within the areas enriched with methane is an ecological compromise between the food requirements of these organisms and their adaptations to the toxic H2S.

Description: [1] While recent studies have confirmed the ecological importance of vitamin B12, it is unclear whether the production of this vitamin could be limited by dissolved Co, a trace metal required for B12 biosynthesis, but found at only subnanomolar concentrations in the open ocean. Herein, we demonstrate that the spatial distribution of dissolved B12 (range: 0.13–5 pmol L−1) in the North Atlantic Ocean follows the abundance of total dissolved Co (range: 15–81 pmol L−1). Similar patterns were observed for bacterial productivity (range: 20–103 pmol 3H leucine L−1 hr−1) and algal biomass (range: 0.4–3.9 μg L−1). In contrast, vitamin B1 concentrations (range: 0.7–30 pM) were decoupled from both Co and B12 concentrations. Cobalt amendment experiments carried out in low-dissolved Co waters (∼20 pmol L−1) enhanced B12 production two-fold over unamended controls. This study provides evidence that B12 synthesis could be limited by the availability of Co in some regions of the world ocean.

Description: We present the first comprehensive investigation of the concentrations, fluxes and sources of aerosol trace elements over the Gulf of Aqaba. We found that the mean atmospheric concentrations of crustally derived elements such as Al, Fe and Mn (1081, 683, and 16.7 ng m�3) are about 2–3 times higher than those reported for the neighboring Mediterranean area. This is indicative of the dominance of the mineral dust component in aerosols over the Gulf. Anthropogenic impact was lower in comparison to the more heavily populated areas of the Mediterranean. During the majority of time (69%) the air masses over the Gulf originated from Europe or Mediterranean Sea areas delivering anthropogenic components such as Cu, Cd, Ni, Zn, and P. Airflows derived from North Africa in contrast contained the highest concentrations of Al, Fe, and Sr but generally lower Cu, Cd, Ni, Zn, and P. Relatively high Pb, Ni, and V were found in the local and Arabian airflows suggesting a greater influence of local emission of fuel burning. We used the data and the measured trace metal seawater concentrations to calculate residence times of dissolved trace elements in the upper 50 m surface water of the Gulf (with respect to atmospheric input) and found that the residence times for most elements are in the range of 5–37 years while Cd and V residence times are longer.

Description: Rapid chemical profiling of the antitumour active crude dichloromethane extract of the marine sponge, Dactylospongia sp. was undertaken. A combination of both offline (HPLC followed by NMR and MS) and on-line (on-flow and stop-flow HPLC-NMR) chemical profiling approaches was adopted to establish the exact nature of the major constituents present in the dichloromethane extract of this sponge. On-flow HPLC-NMR analysis was employed to initially identify components present in the dichloromethane extract, while stop-flow HPLC-NMR experiments were then conducted on the major component present, resulting in the partial identification of pentaprenylated p-quinol (5). Subsequent off-line RP semi-preparative HPLC isolation of 5 followed by detailed spectroscopic analysis using NMR and MS permitted the complete structure to be established. This included the first complete carbon NMR chemical shift assignment of 5 based on the heteronuclear 2-D NMR experiments, together with the first report of its antitumour activity. This study represents one of the few reports describing the application of HPLC-NMR to chemically profile secondary metabolites from a marine organism.

Description: This first quantitative study of the diet of Emperor penguins is based on 29 stomach contents collected with a water off-loading method in Adelie Land. The Emperor is largely ichthyophagous (65% by number and 95% by weight) and feeds extensively on small nototheniids (97% of the fish are 40–125 mm in overall length). These results and data on meal size and feeding frequency of the chick suggest that Emperors are off-shore foraging birds offering little competition for food with other sea-birds or mammals.

Description: The diet of King Penguins Aptenodytes patagonicus at Macquarie Island was studied between November 1984 and November 1985 based on stomach flushed samples (obtaining 93% of the total stomach content) from ten birds each month. The mean stomach content mass of the 118 samples was 923 0 g. Percentage by number, percentage by weight and dietary coefficient analysis all showed the main prey of the penguins to be myctophid lantern fish of the species Electrona carlsbergi and Krefftichthys anderssoni. Juvenile fish of both species were eaten from December to July, and adults in August and September. Cephalopods were relatively unimportant in contrast to previous indications. The amount of food brought ashore and the composition of the diet varied over the year, with K. anderssoni the dominant food in all but the winter months when E. carlsbergi replaced it as the principal food item.

Description: An automatic food dispenser was designed for use with Octopus vulgaris Lamarck. One live crab was delivered each time the octopus pulled a white shape attached to the dispenser. The apparatus provided a continuous record of the time and frequency of feeding over periods of up to 15 days.

Description: In the past decade, a major trawl fishery for the squid Loligo gahi has developed in the vicinity of Beauchêne Island, an internationally important breeding site for the Black-browed Albatross Diomedea melanophris. The breeding season diet of this albatross in the Falklands and its use of discards generated by the Loligo fishery were investigated. Albatross chicks are fed extensively on commercially exploited species of squid and fish including Loligo gahi and southern blue whiting Micromesistius australis. The quantity of waste generated by the Loligo fishery amounts to c. 5% of the reported catch and just over 50% of this waste, mainly Loligo and nototheniid fish, is scavenged by adult Black-browed Albatrosses. The total quantity scavenged during the chick rearing period amounts to 1000–2000 tonnes per year. This is equivalent to 10–15% of the total food requirement of the breeding Black-browed Albatross population on Beauchene Island during the period when the fishery is operating. Although the Loligo fishery currently provides a significant quantity of food to these albatrosses, its net effect may be detrimental to them, as it is a much greater predator of Loligo stocks than the albatrosses are estimated to have been prior to the fishery's development.

Description: The genetic paradigm of cancer, focused largely on sequential molecular aberrations and associated biological impact in the neoplastic cell compartment of malignant tumors, has dominated our view of cancer pathogenesis. For the most part, this conceptualization has overlooked the dynamic and complex contributions of the surrounding microenvironment comprised of non-tumor cells (stroma) that may resist, react to, and/or foster tumor development. Pancreatic ductal adenocarcinoma (PDAC) is a highly lethal disease in which a prominent tumor stroma compartment is a defining characteristic. Indeed, the bulk of PDAC tumor volume consists of non-neoplastic fibroblastic, vascular, and inflammatory cells surrounded by immense quantities of extracellular matrix, far exceeding that found in most other tumor types. Remarkably, little is known about the composition and physiology of the PDAC tumor microenvironment, in particular, the role of stroma in tumor initiation and progression. This review attempts to define key challenges, opportunities and state-of-knowledge relating to the PDAC microenvironment research with an emphasis on how inflammatory processes and key cancer pathways may shape the ontogeny of the tumor stroma. Such knowledge may be used to understand the evolution and biology of this lethal cancer and may convert these insights into new points of therapeutic intervention.

Description: Time-of-Flight Secondary Ion Mass Spectrometry (ToF-SIMS) with a bismuth cluster primary ion source was used for analysing microbial lipid biomarkers in 10-µm-thick microscopic cryosections of methanotrophic microbial mats from the Black Sea. Without further sample preparation, archaeal isopranyl glycerol di- and tetraether core lipids, together with their intact diglycoside (gentiobiosyl-) derivatives, were simultaneously identified by exact mass determination. Utilizing the imaging capability of ToF-SIMS, the spatial distributions of these biomarkers were mapped at a lateral resolution of 〈 5 µm in 500 × 500 µm2 areas on the mat sections. Using inline image cluster projectiles in the burst alignment mode, it was possible to reach a lateral resolution of 1 µm on an area of 233 × 233 µm, thus approaching the typical size of microbial cells. The mappings showed different ‘provenances’ within the sections that are distinguished by individual lipid fingerprints, namely (A) the diethers archaeol and hydroxyarchaeol co-occurring with glycerol dialkyl glycerol tetraethers (GDGT), (B) hydroxyarchaeol and dihydroxyarchaeol, and (C) GDGT and gentiobiosyl-GDGT. Because ToF-SIMS is a virtually nondestructive technique affecting only the outermost layers of the sample surface (typically 10–100 nm), it was possible to further examine the studied areas using conventional microscopy, and associate the individual lipid patterns with specific morphological traits. This showed that provenance (B) was frequently associated with irregular, methane-derived CaCO3 crystallites, whereas provenance (C) revealed a population of fluorescent, filamentous microorganisms showing the morphology of known methanotrophic ANME-1 archaea. The direct coupling of imaging mass spectrometry with microscopic techniques reveals interesting perspectives for the in-situ study of lipids in geobiology, microbial ecology, and organic geochemistry. After further developing protocols for handling different kinds of environmental samples, ToF-SIMS could be used as a tool to attack many challenging problems in these fields, such as the attribution of biological source(s) to particular biomarkers in question, or the high-resolution tracking of biogeochemical processes in modern and ancient natural environments.

Description: Methane (CH4) concentration and stable isotope (δ2H-CH4 and δ13C-CH4) depth distributions show large differences in the water columns of the Earth's largest CH4-containing anoxic basins, the Black Sea and Cariaco Basin. In the deep basins, the between-basin stable isotope differences are large, 83‰ for δ2H-CH4 and 9‰ for δ13C-CH4, and the distributions are mirror images of one another. The major sink in both basins, anaerobic oxidation of CH4, results in such extensive isotope fractionation that little direct information can be obtained regarding sources. Recent measurements of natural 14C-CH4 show that the CH4 geochemistry in both basins is dominated (∼64 to 98%) by inputs of fossil (radiocarbon-free) CH4 from seafloor seeps. We derive open-system kinetic isotope effect equations and use a one-dimensional (vertical) stable isotope box model that, along with isotope budgets developed using radiocarbon, permits a quantitative treatment of the stable isotope differences. We show that two main factors control the CH4 concentration and stable isotope differences: (1) the depth distributions of the input of CH4 from seafloor seeps and (2) anaerobic oxidation of CH4 under open-system steady state conditions in the Black Sea and open-system non-steady-state conditions in the Cariaco Basin.

Description: During a 10-year study more than 2,000 phytoplankton samples were collected from the entire coast of Peru and analyzed. In general, diatoms were the most abundant group of organisms in all seasons. Predominant species were Rhizosolenia delicatula, Skeletonema costatum Thalassiosira subtilis, Thalassionema nitzschioides and several species of the genus Chaetooeros. Dinoflagellates and flagellates were observed frequently during summer. The mean distribution of the phytoplankton concentration during the 10 years shows the existence of several centers with higher cell densities along the coast, coinciding with the areas of more intense and persistent upwelling. Four major centers have been identified: Pimentel (˜6°S), Chimbote (˜9°S), Callao (˜12°S), and Tambo de Mora-Pisco (˜15°S); and two minor centers, Talara (˜4°S) and Ilo (˜17°S). The relative importance of each center seems to change according to the season. The highest phytoplankton concentration tended to be in the northern part of the coast during fall and winter and in the south through spring and summer.

Description: The achievable accuracy of bathymetric mapping in the deep ocean using robotic systems is most often limited by the available guidance or navigation information used to combine the measured sonar ranges during the map making process. This paper presents an algorithm designed to mitigate the affects of poor ground referenced navigation by applying the principles of map registration and pose filtering commonly used in simultaneous localization and mapping (SLAM) algorithms. The goal of the algorithm is to produce a self-consistent point cloud representation of the bottom terrain with errors that are on a scale similar to the sonar range resolution rather than any direct positioning measurement. The presented algorithm operates causally and utilizes sensor data that are common to instrumented underwater robotic vehicles used for mapping and scientific explorations. Real world results are shown for data taken on several expeditions with the JASON remotely operated vehicle (ROV). Comparisons are made between more standard mapping approaches and the proposed method is shown to significantly improve the map quality and reveal scene information that would have otherwise been obscured due to poor direct navigation information.

Description: Chemical investigation of the fungus Trichoderma sp., isolated from the Caribbean sponge Agelas dispar led to four novel sorbicillinoid polyketide derivatives (1–4) with an unprecedented tricyclic ring system. The structures of all compounds, including the absolute configuration, were determined by interpretation of their spectroscopic data (1D and 2D NMR, CD, MS, UV and IR), and molecular modeling calculations.

Description: Sections of the lateral line organ, primary and secondary blood vessels and skin from the Atlantic cod Gadus morhua, Linnaeus 1758, were examined by light and transmission electron microscopy (TEM). The lateral line organ showed a structural analogy to the semicircular canals of the mammalian inner ear. A pericanalicular sinus (PCS), a canal of very loose connective tissue, surrounded the lateral line canal (LLC), separated by a multilayered epithelial wall. Located dorsal and ventral to the lateral line organ secondary vessels of capillary dimensions were found in association with the PCS. TEM of the wall of these dorso-ventral vessels showed single tight junction contacts between the endothelial cells, allowing paracellular fluid exchange between the secondary vascular system and the PCS, an indication supported by horseradish peroxidase (HRP) tracer experiments, which showed reaction products in the PCS within 2 h after injecting HRP into the systemic circulation. The multilayered epithelial wall of the LLC showed multiple tight junctions between cells, making this boundary permeable only through transcellular transport.

Description: This paper presents an event stratigraphy based on data documenting the history of vegetation cover, lake-level changes and fire frequency, as well as volcanic eruptions, over the Last Glacial–early Holocene transition from a terrestrial sediment sequence recovered at Lake Accesa in Tuscany (north-central Italy). On the basis of an age–depth model inferred from 13 radiocarbon dates and six tephra horizons, the Oldest Dryas–Bølling warming event was dated to ca. 14 560 cal. yr BP and the Younger Dryas event to ca. 12 700–11 650 cal. yr BP. Four sub-millennial scale cooling phases were recognised from pollen data at ca. 14 300–14 200, 13 900–13 700, 13 400–13 100 and 11 350–11 150 cal. yr BP. The last three may be Mediterranean equivalents to the Older Dryas (GI-1d), Intra-Allerød (GI-1b) and Preboreal Oscillation (PBO) cooling events defined from the GRIP ice-core and indicate strong climatic linkages between the North Atlantic and Mediterranean areas during the last Termination. The first may correspond to Intra-Bølling cold oscillations registered by various palaeoclimatic records in the North Atlantic region. The lake-level record shows that the sub-millennial scale climatic oscillations which punctuated the last deglaciation were associated in central Italy with different successive patterns of hydrological changes from the Bølling warming to the 8.2 ka cold reversal. Copyright © 2006 John Wiley & Sons, Ltd.

Description: Lake Superior has exhibited a continuous, century-long increase in nitrate whereas phosphate remains at very low levels. Increasing nitrate and low phosphate has led to a present-day severe stoichiometric imbalance; Lake Superior's deepwater NO3−:PO43− molar ratio is 10,000, more than 600 times the mean requirement ratio for primary producers. We examine the rate of [NO3−] increase relative to budgets for NO3− and fixed N. Nitrate in Lake Superior has continued to rise since 1980, though possibly at a reduced rate. We constructed whole-lake NO3− and N budgets and found that NO3− must be generated in the lake at significant rates. Stable O isotope results indicate that most NO3− in the lake originated by in-lake oxidation. Nitrate in the lake is responding not just to NO3− loading but also to oxidation of reduced forms of nitrogen delivered to the lake. The increasing [NO3−]:[PO43−] stoichiometric imbalance in this large lake is largely determined by these in-situ processes.

Description: The movements of the isolated buccal mass of Octopus vulgaris have been investigated. The beaks undergo rhythmic cycles of activity in the absence of applied stimulation and after electrical stimulation of the inter-buccal connective. Initial opening, closing, retraction and re-opening phases of movement are described. This cycle of movements is taken to resemble those in the intact animal. Anatomical and electrical evidence identifies the superior mandibular muscle as being partly responsible for the closing and retraction phases of movement. The inferior buccal ganglion determines the sequence of these buccal movements, but modification by sensory feed-back from the musculature is also implied. The preparation will allow a closer comparison of the control of movement in cephalopods and gastropods.

Description: Taonius megalops is a neutrally buoyant oceanic squid, very different in form when young and old. The young, has a round, sac-like mantle and relatively long tentacles, while the adult has an elongated cone-like mantle and relatively short tentacles. The transition in shape and form is gradual and has been followed in animals of between 3 and 180 mm dorsal mantle length. Statistical tests on various parameters investigated, both external and internal, revealed good correlation with the dorsal mantle length and confirmed the descriptions of the development of the chromatophores and subocular light organs with growth. It was concluded that these animals, captured in the Atlantic Ocean, all belonged to the species T. megalops Prosch 1849. This study has permitted us to suggest a tentative outline of the life cycle, although no adults were present in the material available.

Description: A crab which has been captured and paralysed by an octopus but retrieved 1 1/2 min later cannot at first be pulled apart by the experimenter: 27 min later it can be dismembered easily. This demonstrates that there is external digestion when Octopus vulgaris feeds upon crabs. However, it is strictly limited at this stage to the arthrodial membrane and the musculo-skeletal attachment mechanisms as the exoskeleton separates at the joints allowing the muscles to be drawn out of the appendages. And yet, two hours after capture, pieces of crab meat are still recognizable in the octopus's stomach. The process of paralysing and cleaning a crab was noticeably slowed after the surgical removal of the radula, salivary papilla or the lateral buccal palps.

Description: The changes in body weight of 12 octopuses, fed on fish or crabs, were followed under laboratory conditions for periods of 1 to 7 1/2 months. The food intake was estimated and compared with the changes in body weight of the octopuses; 25 to 55% of the total intake of food appeared to be incorporated. The range of the average increase in weight over the whole observation period of each of the animals was 1.9 to 7.7g per day (1 to 7 1/2 months); the mean value was 4.8g per day. The effect of changing the diet of small octopuses (fish or crab)was followed for four weeks but there was no evidence that alteration of the diet affected the rate of changes in body weight of animals of more than 47g initial body weight.

Description: Control of lacustrine phytoplankton biomass by phosphorus is one of the oldest and most stable paradigms in modern limnology. Even so, evidence from bioassays conducted by multiple investigators at numerous sites over the last three decades shows that N is at least as likely as P to be limiting to phytoplankton growth. A number of important flaws in the evidence supporting the phosphorus paradigm have contributed to an unrealistic degree of focus on phosphorus as a controlling element. These include insufficient skeptism in interpretation of: 1) the phosphorus: chlorophyll correlation in lakes, 2) the results of whole-lake fertilization experiments, and 3) stoichiometric arguments based on total N:total P ratios for inland waters. A new paradigm based on parity between N and P control of phytoplankton biomass in lakes seems more viable than the P paradigm. The new paradigm renews interest in the degree to which plankton communities are molded in composition by small differences in relative availability of N and P, the mechanisms that lead to a high frequency of N limitation in oligotrophic lakes, and the failure of aquatic N-fixers to compensate significantly for N deficiency under most conditions. A new N/P paradigm still must acknowledge that suppression of P loading often will be the most effective means of reducing phytoplankton biomass in eutrophic lakes, even if N is initially limiting.

Description: Blennolides A–G (2–8), seven unusual chromanones, were isolated together with secalonic acid B (1) from Blennoria sp., an endophytic fungus from Carpobrotus edulis. This is the first reported isolation of the blennolides 2 and 3 (hemisecalonic acids B and E), the existence of which as the monomeric units of the dimeric secalonic acids had long been postulated. A compound of the proposed structure 4 (β-diversonolic ester) will need to be revised, as its reported data do not fit those of the established structure of blennolide C (4). Other monomers, the blennolides D–F (5–7) seem to be derived from blennolides A (2) and B (3) by rearrangement of the hydroaromatic ring. The heterodimer 8, composed of the monomeric blennolide A (2) and the rearranged 11-dehydroxy derivative of blennolide E (6), extends the ergochrome family with an ergoxanthin type of skeleton. The structures of the new compounds were elucidated by detailed spectroscopic analysis and further confirmed by an X-ray diffraction study of a single crystal of 2. The absolute configurations were determined by TDDFT calculations of CD spectra, including the solid-state CD/TDDFT approach. Preliminary studies showed strong antifungal and antibacterial activities of these compounds against Microbotryum violaceum and Bacillus megaterium, respectively. They were also active against the alga Chlorella fusca and the bacterium Escherichia coli.

Description: This study examined stocking with three early life stages of brown trout, Salmo trutta L., in the context of rehabilitating a native lineage. Experimental sections in five streams were stocked successively with three stages (I: unfed fry at the end of the reabsorption phase, II: fed fry measuring 2–3 cm and III: fed fry measuring 4–5 cm) derived from a hatchery stock bred from wild spawners. The three stages were distinguished by single or multiple fluoromarking of the otoliths with alizarin redS. The index of relative stocking efficiency was greater for stage II than for stage I in all sections and equivalent or greater than that for stage III. Stage II achieved significantly larger mean length and weight in autumn than stage III stockings.

Description: Sections PDFPDF Tools Share Abstract Many trophically transmitted parasites have complex life cycles: they pass through at least one intermediate host before reproducing in their final host. Despite their economic and theoretical importance, the evolution of such cycles has rarely been investigated. Here, combining a novel modeling approach with experimental data, we show for the first time that an optimal transfer time between hosts exists for a “model parasite,” the tapeworm Schistocephalus solidus , from its first (copepod) to its second (fish) intermediate host. When transferring between hosts around this time, (1) parasite performance in the second intermediate host, (2) reproductive success in the final host, and (3) fitness in the next generation is maximized. At that time, the infected copepod's behavior changes from predation suppression to predation enhancement. The optimal time for switching manipulation results from a trade‐off between increasing establishment probability in the next host and reducing mortality in the present host. Our results show that these manipulated behavioral changes are adaptive for S. solidus , rather than an artifact, as they maximize parasite fitness.

Description: A new version of SODA, which covers the time period 1958–2005, is used to analyze decadal variability of the Pacific Subtropical Cell (STC) circulation. The analysis is based on transport time series across 9°S and 9°N. At the interannual time scale, STC convergence anomalies decrease during El Niños and increase during La Niñas through Sverdrup transport convergence changes. At decadal time scales, the assimilation shows a reduction of interior STC convergence of about 8 Sv from the 1960s to the 1990s and a subsequent rebound into the early 2000s by a similar amount, in agreement with the STC tendencies reported earlier from geostrophic section analysis, and associated with the occurrence and intensity of ENSO events among the decades analyzed. The results are compared with, and differ significantly from, those obtained by the German ECCO (GECCO) assimilation.

Description: Laboratory experiments were carried out in a seawater mesocosm tank to investigate the influence of marine phytoplankton growth on air bubble residence time (BRT). Air bubbles of 10–1000 μm in diameter were injected by flushing a water jet into the top of the tank and BRT was determined acoustically. The tank was filled with seawater containing a natural phytoplankton population and growth stimulated by irradiating with artificial fluorescent light. A second experiment was conducted using a monoculture of the diatom Cylindrotheca closterium. BRT and several phytoplankton growth-related parameters (chlorophyll concentration, dissolved inorganic nutrients, dissolved organic carbon (DOC), oxygen saturation and bacteria numbers) as well as the water viscosity were monitored over periods of up to 24 days. BRT showed a statistically significant covariation with oxygen saturation (r = 0.69, α = 0.01 for natural phytoplankton; r = 0.93, α = 0.01 for the Cylindrotheca closterium) and chlorophyll concentration (r = 0.69, α = 0.05 natural phytoplankton; r = 0.76, α = 0.01 Cylindrotheca closterium) during phytoplankton growth periods. Increases in BRT of a factor 〉2 were found during the chlorophyll maximum, when the water was sufficiently supersaturated with oxygen (~〉110%). No clear relationship was evident between BRT and measurements of DOC or water viscosity. Model experiments with highly oxygen-supersaturated water and artificial polysaccharide compounds indicated that oxygen supersaturation alone is not the main factor causing increased BRT during phytoplankton growth, but it is most likely a combination of the degree of gas saturation and the composition of the organic exudates derived from the microalgal population.

Description: A series of 500 years long coupled general circulation model simulations has been performed, in which the sea surface temperatures (SSTs) in different tropical oceans have been prescribed from climatology. A statistically significant reduction by about one Sverdrup of the meridional overturning circulation (MOC) in the North Atlantic was found when the tropical Pacific SSTs do not vary interannually. Anomalously low salinities originating in the tropical Atlantic due to increased precipitation drive the reduction of the MOC. Climatological SSTs in the tropical Pacific lead to a “La Niña”-like state due to the nonlinear response of the atmosphere to SST anomalies. The shift of the mean atmospheric circulation in the tropical Pacific leads to a cyclonic anomaly over the eastern tropical Atlantic with a corresponding precipitation increase. The results suggest that changes in the SST variability of the tropical Pacific can drive changes in the mean state of remote regions.

Description: Large volcanic edifices are often shaped by the coalescence of adjacent volcanoes as well as intrusive rift zones and gravitational spreading. To better understand the structure of such volcanoes we designed analogue experiments simulating gravitational spreading of an edifice made by overlapping cones of different age, and examined the formation of rift zones. The results allow distinction of two main rift geometries. (i) Spreading edifices of similar age that partly overlap, tend to develop a rift zone approximately perpendicular to the boundary of both volcanoes. Such a rift zone causes two volcanoes to grow together and form an elongated topographic ridge. (ii) Partly overlapping volcanoes of different age are spreading at different rates and thus form a rift zone parallel to the boundary of both volcanoes. Such a rift zone causes two volcanoes to structurally separate. The results are widely applicable for large volcanoes subject to rifting and flank spreading, which we demonstrate for Réunion Island and for southern Hawaii.

Description: Polymorphicgenesofthemajorhistocompatibilitycomplex(MHC)areregardedasessential genes for individual fitness under conditions of natural and sexual selection. To test this hypothesis, we investigated the ultimate individual fitness trait — that of reproductive success. We used three-spined sticklebacks (Gasterosteus aculeatus) in seminatural enclosures, located in natural breeding areas where the experimental fish had been caught. During their reproductive period, fish were exposed continuously to their natural sympatric parasites. By genotyping almost 4000 eggs with nine microsatellites, we determined parenthood and inferred female mating decision. We found that with reference to their own MHC profile, female sticklebacks preferred to mate with males sharing an intermediate MHC diversity. In addition, males with a specific MHC haplotype were bigger and better at fighting a common parasite (Gyrodactylus sp.). This translated directly into Darwinian fitness since fish harbouring this specific MHC haplotype were more likely to be chosen and had a higher reproductive output. We conclude that females also based their mating decision on a specific MHChaplotype conferring resistance against a common parasite. This identifies and supports ‘good genes’. We argue that such an interaction between host and parasite driving assortative mating is not only a prerequisite for negative frequency-dependent selection — a potential mechanism to explain the maintenance of MHC polymorphism, but also potentially speciation.

Description: The Pacific Subtropical Cell (STC) circulation is being analyzed from transport time series across 9°S and 9°N, obtained from the German ECCO (GECCO) assimilation results for the period 1952–2002. In this estimate, the interior Pacific STC convergence shows significantly less decadal slowdown from the 1960's to the 1990's (∼5Sv), than in previous estimates based on hydrographic sections. In the GECCO results, about half of this STC convergence decrease is compensated by an increase in the equatorward transport of the western boundary currents. Overall, the STC varies primarily on interannual time scale, with relatively short time lags between STC convergence and transport variations of the Equatorial Undercurrent at 140°W.

Description: A Holocene Gulf of Guinea record of riverine runoff, based on Ba/Ca in tests of a shallow-dwelling planktic foraminifer, and sea surface temperature (SST), based on Mg/Ca, reveals centennial-scale instabilities in West African monsoon (WAM) precipitation and eastern equatorial Atlantic (EEA) thermal conditions. The long-term Holocene climate trend is characterized by a warm and wet early-mid Holocene and gradual drying and cooling during the late Holocene. Superimposed on this trend are numerous centennial scale drops in precipitation during the early-mid Holocene. The greatest declines in early Holocene monsoon precipitation were accompanied by significant SST cooling in the EEA and correlate with drops in air temperature over Greenland and fresh water outbursts into the North Atlantic (NA). This observation suggests that early Holocene climate instabilities in the NA were closely linked to changes in the WAM. The strong imprint of NA events in summer monsoon precipitation suggests that these events were not confined to winter-time. The late Holocene does not show large amplitude changes in riverine runoff at the centennial level. The relatively stable late Holocene conditions likely reflect a weakening and stabilization of the monsoon system, probably due to diminished influence of the NA region due to a reduction in ice sheet.

Description: We present a new dust source area map for the Sahara and Sahel region, derived from the spatiotemporal variability of composite images of Meteosat Second Generation (MSG) using the 8.7, 10.8 and 12.0 μm wavelength channels for March 2006–February 2007. Detected dust events have been compared to measured aerosol optical thickness (AOT) and horizontal visibility observations. Furthermore the monthly source area map has been compared with the Ozone Monitoring Instrument aerosol index (AI). A spatial shift of the derived frequency patterns and the local maxima of AI-values can be explained by wind-transport of airborne dust implicitly included in the AI signal. To illustrate the sensitivity of a regional model using the new dust source mask, we present a case study analysis that shows an improvement in reproducing aerosol optical thickness in comparison to the original dust source parameterization.

Description: The intratest variation in the chemical composition of Globorotalia scitula and G. inflata recovered from a sediment trap sample collected at 3000 m in the North Atlantic in early spring has been investigated using laser ablation inductively coupled plasma–mass spectrometry and electron microprobe. Mg/Ca, Li/Ca, B/Ca, Mn/Ca, and Ba/Ca vary by up to a factor of 10 through the test walls. Water column properties, including temperature and salinity, are well documented at the trap site, and the observed variations are too large to be explained by vertical migration of the foraminifera. However, changes in calcite precipitation rate, crystal structure, or the chemical composition of the internal calcification reservoir also cannot, by themselves, fully account for the pattern of intratest variability. Nevertheless, the average Mg/Ca for each chamber generally produces a Mg/Ca temperature that matches that measured in the water column. The exception is small, morphologically distinct G. inflata tests that have anomalously high Mg/Ca.

Description: Changes of the meridional overturning circulation (MOC) due to surface heat flux variability related to the North Atlantic Oscillation (NAO) are analyzed in various ocean models, i.e., eddying and non‐eddying cases. A prime signature of the forcing is variability of the winter‐time convection in the Labrador Sea. The associated changes in the strength of the MOC near the subpolar front (45°N) are closely related to the NAO‐index, leading MOC anomalies by about 2–3 years in both the eddying and non‐eddying simulation. Further south the speed of the meridional signal propagation depends on model resolution. With lower resolution (non‐eddying case, 4/3° resolution) the MOC signal propagates equatorward with a mean speed of about 0.6 cm/s, similar as spreading rates of passive tracer anomalies. Eddy‐permitting experiments (1/3°) show a significantly faster propagation, with speeds corresponding to boundary waves, thus leading to an almost in‐phase variation of the MOC transport over the subtropical to subpolar North Atlantic.

Description: The long-term data sets of total alkalinity (TA) (1929–2002 A.D.) and δ18O (1966–2002 A.D.) are used to investigate freshwater and brine distributions in the Arctic Ocean. Fractions of sea ice meltwater and other freshwaters (OF) (precipitation, river runoff, and freshwater carried by Pacific water implied as salinity deficit) are calculated on the basis of salinity-TA and salinity-δ18O relationships. Rejected brine during sea ice growth resides in surface water in the central Arctic Ocean, while net melting is found along the surface flow of water from the Pacific and Atlantic oceans. Distribution of OF at 10 m water depth suggests that Russian runoff leaves the shelf mainly west of the Mendeleyev Ridge, enters into the deep basin, and exits from the ocean through the western part of Fram Strait. The influence of Mackenzie River water is limited in the region and in depth. Accumulation of freshwater in the Canadian Basin is caused by deep penetration of OF with brine, indicating the transport of freshwater by shelf-derived water. The major origin of shelf-derived water entering into the upper halocline layer in the Canadian Basin should be the Chukchi and East Siberian Sea shelves, and the main freshwater sources are the salinity deficit of Pacific water and/or Russian runoff. An increase in OF inventory accompanied by an increase in brine content may suggest an increase of the shelf-derived water supply into the western Canadian Basin in anticyclonic years.

Description: We use traveltime data of local earthquakes and controlled sources observed by a large, temporary, amphibious seismic network to reveal the anatomy of the southcentral Chilean subduction zone (37–39°S) between the trench and the magmatic arc. At this location the giant 1960 earthquake (M = 9.5) nucleated and ruptured almost 1000 km of the subduction megathrust. For the three-dimensional tomographic inversion we used 17,148 P wave and 10,049 S wave arrival time readings from 439 local earthquakes and 94 shots. The resolution of the tomographic images was explored by analyzing the model resolution matrix and conducting extensive numerical tests. The downgoing lithosphere is delineated by high seismic P wave velocities. High vp/vs ratio in the subducting slab reflects hydrated oceanic crust and serpentinized uppermost oceanic mantle. The subducting oceanic crust can be traced down to a depth of 80 km, as indicated by a low velocity channel. The continental crust extends to approximately a 50-km depth near the intersection with the subducting plate. This suggests a wide contact zone between continental and oceanic crust of about 150 km, potentially supporting the development of large asperities. Eastward the crustal thickness decreases again to a minimum of about a 30-km depth. Relatively low vp/vs at the base of the forearc does not support a large-scale serpentinization of the mantle wedge. Offshore, low vp and high vp/vs reflect young, fluid-saturated sediments of forearc basins and the accretionary prism.

Description: Sedimentation rates (corrected for compaction) from along the passive continental margin of Africa between the Equatorial Fracture Zone and Somalia are used to compare the rates of subsidence of the continental crust since early Mesozoic time. Three distinctive subsidence histories can be identified which correspond with basinal areas that have different structural styles: rifted (west coast), sheared (Equatorial and Agulhas fracture zones) and sunk (zones of vertical tectonics in eastern Africa). A comparison of subsidence rates with other tensional margins (NE USA and the North Sea) and a consideration of the plate tectonic history of the African margins leads to the proposal of a geo and thermodynamic model that takes cognizance of the worldwide mid-Cretaceous rheological discontinuity between taphrogenic and epeirogenic basin formation recognized by Kent, and the more generally accepted, purely plate tectonic driven model of margin subsidence. The new suggestion involves a lower Mesozoic worldwide rise in the geothermal gradient in the lithosphere which produces metamorphism of the base of the continental crust and initiates taphrogenesis along lineaments throughout Gondwanaland. A lowering of the geothermal gradient in the lower Cretaceous produces a switch to epeirogenic subsidence, driven solely by sediment loading and thermal contraction, by Aptian/Albian times. The thermal event facilitated continental separation, and sea floor spreading commenced locally at various times along the active taphrogenic belts. Local thermal and tectonic aberrations associated with this phenomenon over print onto the worldwide pattern of marginal basin subsidence. A further rise in the geothermal gradient may have been responsible for renewed taphrogenesis in eastern Africa in Tertiary times.

Description: Diosmetin, 5,7,3′-trihydroxy-4′-methoxyflavone shows chemopreventive, antimutagenic, and antiallergic effects. On the other hand, chrysoeriol, 5,7,4′-trihydroxy-3′-methoxyflavone induced nodABC-lacZ in Rhizobium meliloti. Both of them belong to hydroxymethoxy- flavones. One major difference between diosmetin and chrysoeriol is the substituted position of hydroxyl and methoxyl groups. In order to elucidate the relationships between their structures and activity, one of the first things to be done is the determination of their structures. However, most flavones occur widely in nature, and thus it is difficult to obtain in sufficient amounts from natural sources to identify their structures. Assignments of NMR data of several hydroxymethoxyflavones may help us to identify novel flavonoid compounds isolated from natural sources based on their NMR experiments. Therefore, we report here the complete assignments of 1H and 13C NMR data of 13 hydroxymethoxyflavones.

Description: We have compiled both laboratory and worldwide field data on electrical conductivity to help understand the physical implications of deep crustal electrical profiles. Regional heat flow was used to assign temperatures to each layer in regional electrical conductivity models; we avoided those data where purely conductive heat flow suggested temperatures more than about 1000°C, substantially higher than solidus temperatures and outside the range of validity of heat flow models. The resulting plots of log conductivity σ versus 1/T demonstrate that even low-conductivity layers (LCL) have conductivities several orders of magnitude higher than dry laboratory samples and that the data can be represented by straight line fits. In addition, technically active regions show systematically higher conductivities than do shield areas. Because volatiles are usually lost in laboratory measurements and their absence is a principal difference between laboratory and field conditions, these materials probably account for the relatively higher conductivities of rocks in situ in the crust; free water in amounts of 0.01–0.1% in fracture porosity could explain crustal conductivities. Other possibilities are graphite, hydrated minerals in rare instances, and sulfur in combination with other volatiles. As most of the temperatures are less than 700°C, partial melting seems likely only in regions of highest heat flow where the conductive temperature profiles are inappropriate. Another result is that at a given temperature, crustal high-conductivity layers (HCL) are more conductive by another order of magnitude and show more scatter than do LCL's. Because the differences between HCL's and LCL's are independent of temperature, we must invoke more than temperature increases as a cause for large conductivity increases; increased fluid concentration in situ seems a probable cause for enhanced conductivities in HCL's. From the point of view of these observations, it does not matter whether the fluids are in communication with the surface or trapped at lithostatic pressures.

Description: High interannual variability of summer surface salinity over the Laptev and East Siberian Sea shelves derived from historical records of the 1950s–2000s is attributed to atmospheric vorticity variations. In the cyclonic regime (positive vorticity) the eastward diversion of the Laptev Sea riverine water results in a negative salinity anomaly to the east of the Lena Delta and farther to the East Siberian Sea, and a positive anomaly to the north of the Lena Delta. Anticyclonic (negative) vorticity results in negative salinity anomalies northward from the Lena Delta due to freshwater advection toward the north, and a corresponding salinity increase eastward.

Description: Before making a critical evaluation of the crude oil and natural gas prospects for the years to the end of the century, it is necessary to review the geology and structure of the three German hydrocarbon-producing provinces. Furthermore, past exploration, production and reserves should be discussed. The three hydrocarbon-producing provinces are: the NW German Basin, the Upper Rhine Graben and the Molasse Basin, which together make up about 41% of West German territory (Fig. 1). The NW German Basin contains a sedimentary sequence over 8,000 m thick ranging in age from Permian to Quaternary. Gas and oil, the two natural hydrocarbons, are generally confined to separate lower and higher stratigraphic levels respectively (Fig. 2). The NW German Basin is the most important prospective area in West Germany. It extends into the North Sea. The tectonic rift feature of the Upper Rhine Graben originated in the Eocene. The Tertiary fill is over 4,000 m thick. Oil is found mainly in Mesozoic, Eocene and Oligocene rocks; the Miocene and Pliocene reservoir rocks contain natural gas almost exclusively (Fig. 3). The Molasse Basin is part of the foredeep north of the Alpine and Carpathian mountain ranges. The basin is filled with Upper Eocene to Pliocene and Quaternary sediments which, near the Alpine nappes, reach a thickness of over 5,000m (Fig. 4). During this century there were peaks in annual oil-production in 1910, 1940 and 1968 (see Fig. 5). The 1910 peak was the result of drilling activity in the Wietze oilfield. During the period 1934–1945, government financial aid was made available for drilling exploration wells. The success of this collaboration is demonstrated by the oil output in 1940 of 1 × 106 t. After World War II, many different types of oil-bearing structure were found, particularly by reflection seismic techniques in conjunction with detailed stratigraphical and palaeogeographical investigations. The success achieved can be seen by the peak of 8 × 106 t oil production for 1968 (Fig. 5) and in the growth of oil reserves (Fig. 7). Intensive exploration also enabled many new gasfields to be developed, especially in the deeper horizons of the NW German Basin. In 1971, estimated gas reserves reached 360 × 109 m3 (Fig. 11), and annual gas production in 1979 was 20.7 × 109 m3 (731 Bcf) (Fig. 9). There is, no doubt, still scope for the discovery and exploitation of oil and gas in Germany, especially in the NW German Basin where the best prospects for the future lie. This is borne out by two recent offshore oil discoveries and also by the successful application of enhanced recovery methods in the oilfields. The chances of finding more gas at the lower stratigraphic levels are promising now that gas has been discovered in the deeper parts of the Permian basin. The results of massive-hydraulic-fracturing tests in low-permeability pay-horizons are also encouraging. The deeper parts of oil- and gas-producing basins contain interesting prospects and have yet to be tested by ultra-deep wells. Provided that the economic climate remains favourable, there should be no difficulty in finding and supplying German oil and gas in the future. Geologically and technically possible reserves should be converted into proven and/or probable reserves. German crude oil will be available for several years beyond the year 2000, and German natural gas for a far longer time. A production rate of 19 to 20 × 109 m3 of gas per annum is feasible over the next twenty years, and oil production will probably not sink below 3 × 106 t/a in this period.

Description: Reproductive mechanisms in the seven species of the thecosomatous pteropod genus Limacina are described and compared. All species are protandrous hermaphrodites. Five species–L. bulimoides, L. helicina, L. lesueuri, L. retroversa and L. trochiformis–have a similar reproductive anatomy in which the gonoduct leading from the gonad to the common genital pore functions as a seminal vesicle in the male and is elaborated into mucous and albumen glands in the female. The male system consists of a prostate gland and penis connected to the common genital pore by an external ciliary tract. All five species have a free-swimming veliger stage which hatches from free-floating egg masses. Limacina helicoides has the same reproductive anatomy but is ovoviviparous, with embryos retained in capsules in the mucous gland until they are juveniles of 50 mm in shell diameter. Limacina inflata lacks mucous and albumen glands and a penis; a spermatophore formed by the prostate gland is used in aphallic sperm transfer. This species exhibits brood protection with un-encapsulated embryos retained in the mantle cavity until they are released as veligers measuring 0067 mm in diameter. L. inflata is the most abundant of the seven species despite lowered fecundity; reasons for its ecological success are discussed.

Description: [1] On the basis of the detailed sedimentological record of the key-core PS66/309-1 and a review of open literature, we present an assessment of the paleoenvironmental conditions as well as trigger mechanism of the Hinlopen/Yermak Megaslide north of Spitsbergen. The Svalbard archipelago is characterized by strong inflow of Atlantic water accompanied by rapidly falling sea level, rapidly growing Svalbard-Barents Sea-Ice Sheet, and associated increasing glaciotectonic activity during the time window around 30 calendar kyr B. P. of this catastrophic failure event. Thus the potential trigger mechanisms include sediment buoyancy and excess pore pressure, hydrate stability, and tectonic/glaciotectonic processes. While the common scenarios seem to fail to explain this unique submarine megaslide, we focus on glacial processes and their consequences for the regional tectonic framework. We conclude that the Hinlopen/Yermak Megaslide has been the consequence of the rapid onset of Late Weichselian glaciation resulting in a drastic sea level drop, asymmetrical ice loading, and a forebulge development leading to enhanced tectonic movements along the Hinlopen fault zone. As the final trigger we assume a strong earthquake positioned below or close to the SE Sophia Basin.

Description: Submersible dives on 22 active submarine volcanoes on the Mariana and Tonga-Kermadec arcs have discovered systems on six of these volcanoes that, in addition to discharging hot vent fluid, are also venting a separate CO2-rich phase either in the form of gas bubbles or liquid CO2 droplets. One of the most impressive is the Champagne vent site on NW Eifuku in the northern Mariana Arc, which is discharging cold droplets of liquid CO2 at an estimated rate of 23 mol CO2/s, about 0.1% of the global mid-ocean ridge (MOR) carbon flux. Three other Mariana Arc submarine volcanoes (NW Rota-1, Nikko, and Daikoku), and two volcanoes on the Tonga-Kermadec Arc (Giggenbach and Volcano-1) also have vent fields discharging CO2-rich gas bubbles. The vent fluids at these volcanoes have very high CO2 concentrations and elevated C/3He and δ 13C (CO2) ratios compared to MOR systems, indicating a contribution to the carbon flux from subducted marine carbonates and organic material. Analysis of the CO2 concentrations shows that most of the fluids are undersaturated with CO2. This deviation from equilibrium would not be expected for pressure release degassing of an ascending fluid saturated with CO2. Mechanisms to produce a separate CO2-rich gas phase at the seafloor require direct injection of magmatic CO2-rich gas. The ascending CO2-rich gas could then partially dissolve into seawater circulating within the volcano edifice without reaching equilibrium. Alternatively, an ascending high-temperature, CO2-rich aqueous fluid could boil to produce a CO2-rich gas phase and a CO2-depleted liquid. These findings indicate that carbon fluxes from submarine arcs may be higher than previously estimated, and that experiments to estimate carbon fluxes at submarine arc volcanoes are merited. Hydrothermal sites such as these with a separate gas phase are valuable natural laboratories for studying the effects of high CO2 concentrations on marine ecosystems.

Description: Multibeam sonar surveys have been conducted since their invention in the 1970s; however, mainly reflections from the seafloor were considered so far. More recently, water column imaging with multibeam is becoming of increasing interest for fisheries, buoy, mooring, or gas detection in the water column. Using ELAC SEABEAM 1000 data, we propose a technique to detect gas bubbles (flares) although this system is originally not designed to record water column data. The described data processing represents a case study and can be easily adapted to other multibeam systems. Multibeam data sets from the Black Sea and the North Sea show reflections of gas bubbles that form flares in the water column. At least for reasonably intense gas escape the detection of bubbles is feasible. The multibeam technique yields exact determination of the source position and information about the dimension of the gas cloud in the water. Compared to conventional flare imaging by single-beam echo sounders, the wide swath angle of multibeam systems allows the mapping of large areas in much shorter time.

Description: It is shown that some important aspects of the space-time structure of multidecadal sea surface temperature (SST) variability can be explained by local air-sea interactions. A concept for “Global Hyper Climate Modes” is formulated: surface heat flux variability associated with regional atmospheric variability patterns is integrated by the large heat capacity of the extra-tropical oceans, leading to a continuous increase of SST variance towards longer timescales. Atmospheric teleconnections spread the extra-tropical signal to the tropical regions. Once SST anomalies have developed in the Tropics, global atmospheric teleconnections spread the signal around the world creating a global hyper climate mode. A simple model suggests that hyper climate modes can vary on timescales longer than 1,000 years. Ocean dynamics may amplify theses modes and influence the regional expression of the variability, but are not at the heart of the mechanism which produces the hyper modes.

Description: Multi-Channel Seismic method (MCS), with its ability to image events down to a lateral resolution of 10 m has been successfully applied to address questions in physical oceanography. However, to date, these analyses have overlooked an important detail; the imaged boundaries are dynamic and move on a timescale that can be resolved by the MCS method. An important step in understanding the effect of the movement is calibration against constrained models. We demonstrate in this paper that it is possible using careful interpolation to take high resolution models of dynamic water (160 m x 2 m spatial resolution and 15 min temporal resolution) and generate models for synthetic seismic simulations (20 m x 4 m spatial resolution and 20 sec temporal resolution). We show that moving water, when ignored, will distort analyses of wavenumber spectra estimated from seismic data since the relative movement of water masses and the seismic acquisition vessel will change the apparent slope of spectra. Citation: Vsemirnova, E., R. Hobbs, N. Serra, D. Klaeschen, and E. Quentel (2009), Estimating internal wave spectra using constrained models of the dynamic ocean, Geophys. Res. Lett., 36, L00D07, doi: 10.1029/2009GL039598.

Description: Several trench-outer rise settings in subduction zones worldwide are characterized by a high degree of alteration, fracturing and hydration. These processes are induced by bending-related faulting in the upper part of the oceanic plate prior to its subduction. Mapping of P- and S-wave velocity structures in this complex tectonic setting provides crucial information for understanding the evolution of the incoming oceanic lithosphere, and serves as a baseline for comparison with seismic measurements elsewhere. Active source seismic investigations at the outer rise off Southern Central Chile (∼43°S) were carried out in order to study the seismic structure of the oceanic Nazca Plate. Seismic wide-angle data were used to derive 2-D velocity models of two seismic profiles located seaward of the trench axis on 14.5 Ma old crust; P01a approximately parallel to the direction of spreading and P03 approximately parallel to the spreading ridge and trench axes. We determined P- and S-velocity models using 2-D traveltime tomography. We found that the Poisson's ratio in the upper crust (layer 2) ranges between ∼0.33 at the top of the crust to ∼0.28 at the layer 2/3 interface, while in the lowermost crust and uppermost mantle it reaches values of ∼0.26 and ∼0.29, respectively. These features can be explained by an oceanic crust significantly weathered, altered and fractured. Relative high Poisson's ratios in the uppermost mantle may be likely related to partially hydrated mantle and hence serpentinization. Thus, the seismic structure of the oceanic lithosphere at the Southern Central Chile outer rise exhibits notable differences from the classic ophiolite seismic model (‘normal’ oceanic crust). These differences are primarily attributed to fracturing and hydration of the entire ocean crust, which are direct consequences of strong bending-related faulting at the outer rise. On the other hand, the comparison of the uppermost mantle P-wave velocities at the crossing point between the perpendicular profiles (∼90 km oceanward from the trench axis) reveals a low degree of Pn anisotropy (〈2 per cent).

Description: Uptake of half of the fossil fuel CO2 into the ocean causes gradual seawater acidification. This has been shown to slow down calcification of major calcifying groups, such as corals, foraminifera, and coccolithophores. Here we show that two of the most productive marine calcifying species, the coccolithophores Coccolithus pelagicus and Calcidiscus leptoporus, do not follow the CO2-related calcification response previously found. In batch culture experiments, particulate inorganic carbon (PIC) of C. leptoporus changes with increasing CO2 concentration in a nonlinear relationship. A PIC optimum curve is obtained, with a maximum value at present-day surface ocean pCO2 levels (∼360 ppm CO2). With particulate organic carbon (POC) remaining constant over the range of CO2 concentrations, the PIC/POC ratio also shows an optimum curve. In the C. pelagicus cultures, neither PIC nor POC changes significantly over the CO2 range tested, yielding a stable PIC/POC ratio. Since growth rate in both species did not change with pCO2, POC and PIC production show the same pattern as POC and PIC. The two investigated species respond differently to changes in the seawater carbonate chemistry, highlighting the need to consider species-specific effects when evaluating whole ecosystem responses. Changes of calcification rate (PIC production) were highly correlated to changes in coccolith morphology. Since our experimental results suggest altered coccolith morphology (at least in the case of C. leptoporus) in the geological past, coccoliths originating from sedimentary records of periods with different CO2 levels were analyzed. Analysis of sediment samples was performed on six cores obtained from locations well above the lysocline and covering a range of latitudes throughout the Atlantic Ocean. Scanning electron micrograph analysis of coccolith morphologies did not reveal any evidence for significant numbers of incomplete or malformed coccoliths of C. pelagicus and C. leptoporus in last glacial maximum and Holocene sediments. The discrepancy between experimental and geological results might be explained by adaptation to changing carbonate chemistry.

Description: Time series of lead (Pb) and neodymium (Nd) isotope compositions were measured on three ferromanganese crusts recording the evolution of NE Atlantic water masses over the past 15 Ma. The crusts are distributed along a depth profile (∼700–4600 m) comprising the present-day depths of Mediterranean Outflow Water and North East Atlantic Deep Water. A pronounced increase of the 206Pb/204Pb in the two deeper crusts starting at ∼4 Ma and a decrease in 143Nd/144Nd in all three crusts took place between ∼6–4 Ma and the present. These patterns are similar to isotope time series in the western North Atlantic basin and are consistent with efficient mixing between the two basins. However, the changes occurred 1–3 Ma earlier in the eastern basin indicating that the northeastern Atlantic led the major change in Pb and Nd isotope composition, probably due to a direct supply of Labrador Seawater via a northern route. The Pb isotope evolution during the Pliocene-Pleistocene can generally be explained by mixing between two end-members corresponding to Mediterranean Outflow Water and North East Atlantic Deep Water, but external sources such as Saharan dust are likely to have played a role as well. The Pb isotope composition of the shallowest crust that grew within the present-day Mediterranean Outflow Water does not show significant Pb isotope changes indicating that it was controlled by the same Pb sources throughout the past 15 Ma.

Description: Microwave Limb Sounder and Sounding of the Atmosphere with Broadband Emission Radiometry data provide the first opportunity to characterize the four-dimensional stratopause evolution throughout the life-cycle of a major stratospheric sudden warming (SSW). The polar stratopause, usually higher than that at midlatitudes, dropped by ∼30 km and warmed during development of a major “wave 1” SSW in January 2006, with accompanying mesospheric cooling. When the polar vortex broke down, the stratopause cooled and became ill-defined, with a nearly isothermal stratosphere. After the polar vortex started to recover in the upper stratosphere/lower mesosphere (USLM), a cool stratopause reformed above 75 km, then dropped and warmed; both the mesosphere above and the stratosphere below cooled at this time. The polar stratopause remained separated from that at midlatitudes across the core of the polar night jet. In the early stages of the SSW, the strongly tilted (westward with increasing altitude) polar vortex extended into the mesosphere, and enclosed a secondary temperature maximum extending westward and slightly equatorward from the highest altitude part of the polar stratopause over the cool stratopause near the vortex edge. The temperature evolution in the USLM resulted in strongly enhanced radiative cooling in the mesosphere during the recovery from the SSW, but significantly reduced radiative cooling in the upper stratosphere. Assimilated meteorological analyses from the European Centre for Medium-Range weather Forecasts (ECMWF) and Goddard Earth Observing System Version 5.0.1 (GEOS-5), which are not constrained by data at polar stratopause altitudes and have model tops near 80 km, could not capture the secondary temperature maximum or the high stratopause after the SSW; they also misrepresent polar temperature structure during and after the stratopause breakdown, leading to large biases in their radiative heating rates. ECMWF analyses represent the stratospheric temperature structure more accurately, suggesting a better representation of vertical motion; GEOS-5 analyses more faithfully describe stratopause level wind and wave amplitudes. The high-quality satellite temperature data used here provide the first daily, global, multiannual data sets suitable for assessing and, eventually, improving representation of the USLM in models and assimilation systems.

Description: In recent years, the Indian Ocean (IO) has been discovered to have a much larger impact on climate variability than previously thought. This paper reviews climate phenomena and processes in which the IO is, or appears to be, actively involved. We begin with an update of the IO mean circulation and monsoon system. It is followed by reviews of ocean/atmosphere phenomenon at intraseasonal, interannual, and longer time scales. Much of our review addresses the two important types of interannual variability in the IO, El Niño–Southern Oscillation (ENSO) and the recently identified Indian Ocean Dipole (IOD). IOD events are often triggered by ENSO but can also occur independently, subject to eastern tropical preconditioning. Over the past decades, IO sea surface temperatures and heat content have been increasing, and model studies suggest significant roles of decadal trends in both the Walker circulation and the Southern Annular Mode. Prediction of IO climate variability is still at the experimental stage, with varied success. Essential requirements for better predictions are improved models and enhanced observations.

Description: The early life-history of Chinese rock carp Procypris rabaudi was investigated during a 56-day rearing period: 318 artificially propagated P. rabaudi larvae were reared throughout metamorphosis in a small-scale recirculation system (345 L water volume, 10 × 18 L rearing tanks, 150 L storage and filter compartment with bioballs, 20–30 larvae L−1) at the Institute of Hydrobiology, Wuhan, Hubei Province, China. The newly hatched larvae had an initial total length of 8.93 ± 0.35 mm SD (n = 10) at 3 days post-hatch and reached an average total length of 33.29 mm (±1.88 mm SD, n = 10) 56 days after hatching. Length increment averaged 0.45 mm day−1, resulting in a mean growth of 24.4 mm within the 56-day period. High mortality rates of up to 92% derived from an introduced fungus infection and subsequent treatment stress with malachite green. Our results indicate that Chinese rock carp can be raised successfully from artificially fertilized eggs. We therefore assume this species to be a candidate for commercial aquaculture.

Description: Anaerobic methane-oxidizing microbial communities in sediments at cold methane seeps are important factors in controlling methane emission to the ocean and atmosphere. Here, we investigated the distribution and carbon isotopic signature of specific biomarkers derived from anaerobic methanotrophic archaea (ANME groups) and sulphate-reducing bacteria (SRB) responsible for the anaerobic oxidation of methane (AOM) at different cold seep provinces of Hydrate Ridge, Cascadia margin. The special focus was on their relation to in situ cell abundances and methane turnover. In general, maxima in biomarker abundances and minima in carbon isotope signatures correlated with maxima in AOM and sulphate reduction as well as with consortium biomass. We found ANME-2a/DSS aggregates associated with high abundances of sn-2,3-di-O-isoprenoidal glycerol ethers (archaeol, sn-2-hydroxyarchaeol) and specific bacterial fatty acids (C16:1ω5c, cyC17:0ω5,6) as well as with high methane fluxes (Beggiatoa site). The low to medium flux site (Calyptogena field) was dominated by ANME-2c/DSS aggregates and contained less of both compound classes but more of AOM-related glycerol dialkyl glycerol tetraethers (GDGTs). ANME-1 archaea dominated deeper sediment horizons at the Calyptogena field where sn-1,2-di-O-alkyl glycerol ethers (DAGEs), archaeol, methyl-branched fatty acids (ai-C15:0, i-C16:0, ai-C17:0), and diagnostic GDGTs were prevailing. AOM-specific bacterial and archaeal biomarkers in these sediment strata generally revealed very similar δ13C-values of around −100. In ANME-2-dominated sediment sections, archaeal biomarkers were even more 13C-depleted (down to −120), whereas bacterial biomarkers were found to be likewise 13C-depleted as in ANME-1-dominated sediment layers (δ13C: −100). The zero flux site (Acharax field), containing only a few numbers of ANME-2/DSS aggregates, however, provided no specific biomarker pattern. Deeper sediment sections (below 20 cm sediment depth) from Beggiatoa covered areas which included solid layers of methane gas hydrates contained ANME-2/DSS typical biomarkers showing subsurface peaks combined with negative shifts in carbon isotopic compositions. The maxima were detected just above the hydrate layers, indicating that methane stored in the hydrates may be available for the microbial community. The observed variations in biomarker abundances and 13C-depletions are indicative of multiple environmental and physiological factors selecting for different AOM consortia (ANME-2a/DSS, ANME-2c/DSS, ANME-1) along horizontal and vertical gradients of cold seep settings.

Description: Investigations into Fe(II) cycling during two Southern Ocean mesoscale iron enrichment experiments, SOFeX and EIFeX, clearly show the importance of Fe(II) to iron speciation during these experiments. In both cases the added Fe(II) persisted significantly longer than its expected oxidation time indicating a significant Fe reduction process at work. During EIFeX diel studies showed a strong photochemically induced cycle in Fe(II) production in sunlit surface waters. Our results suggest that the photochemical cycling of iron may also be important in unfertilized waters of the Southern Ocean.

Description: Measurements of CH4 concentrations in the bottom water during two discrete sampling periods in subsequent years above different cold seeps at the Pacific margin off Costa Rica indicate large-scale variations of CH4 release. CH4 is emitted from mud extrusions and a slide scar at 1000–2300 m water depth. Maximum CH4 concentrations were found to be lower above all investigated sites in autumn 2003 than in autumn 2002 although seep sites are up to 300 km apart. Tidal and current changes were observed but found to apply only to individual seep sites. Increased seismic activity connected to the moment magnitude (M W ) 6.4 earthquake offshore Costa Rica in June 2002 could have had an impact on all seep sites and thereby caused an increase in CH4 emission. This is supported by the largest variations of CH4 concentration found above mud extrusions located above faults likely more strongly affected by tectonic movements. Even though our data indicate a relation between seismicity and CH4 seepage, the relation is not proven, and future work is needed to comprehensively test this hypothesis.

Description: Transmission of top-down control from fish to phytoplankton via crustacean mesozooplankton is a cornerstone of limnetic plankton ecology. Such trophic cascades are less frequently reported from the marine pelagic. In this article a case is made for consideration of scale issues and for the distinction between full (affecting entire trophic levels) and partial (affecting only some functional groups) trophic cascades. Partial cascades are more widespread while the full cascades are either ephemeral or depend on the suppression of compensatory growth of the predation-resistant size-fractions of phytoplankton. This suppression can only be achieved if there is a persistent coexistence between zooplankton feeding on different parts of the phytoplankton size spectrum. This condition is fulfilled in plankton communities where microphageous cladocerans (mainly Daphnia) and microphageous copepods coexist (many lake communities) or where krill and copepods coexist (high latitude marine communities). It is not fulfilled in many temperate and low-latitude marine communities where copepods effectively suppress filter-feeding appendicularians. Thus, the observed difference in the frequency of marine and limnetic pelagic cascades is considered real. Are all trophic cascades wet?

Description: The observation of spatial and temporal dynamics of the ocean is fundamental to understand global and regional aspects of water mixing. Physical oceanography has traditionally observed ocean structures with in situ measurements, often limited in temporal and/or spatial resolution. In exploration seismology a set of techniques has been developed over the last decades to image and characterize the physical properties of sub-seafloor structures by inversion methods at high horizontal resolution. The two different fields have made contact in seismic oceanography where the well developed methods of marine reflection seismology have been applied to the dynamic ocean. However, one aspect, so far ignored in seismic oceanography, is the dynamical, temporally varying nature of water structures. Here we show that it is possible to estimate temporal variations of reflectors in water structures as an inversion parameter. The new dynamic property reflector movement velocity gives an additional parameter to characterize ocean water dynamics.

Description: Diagenetic processes are known to modify sedimentary records, but they can also reveal important paleoenvironmental changes. Here we investigate variations in sedimentary iron diagenesis and depositional environments for the last 35 ka by analyzing the rock magnetic and geochemical properties of two sediment cores collected in the Santa Barbara Basin (California). In organic-rich sediments, early diagenesis often leads to partial dissolution of detrital iron oxides and stepwise formation of authigenic pyrite (FeS2). The pyritization process takes place following several geochemical pathways, sometimes involving intermediate iron sulfide species such as greigite (Fe3S4). Sedimentary conditions in the basin appear to have recurrently favored preservation of greigite (identified by its magnetic properties) and inhibited its complete transformation into pyrite. The Holocene interval contains a series of centimeter-thick greigite-bearing layers that are associated with large flood deposits, which are known in the basin as ‘‘gray layers.’’ We propose that greigite preservation was enabled in these sediments by their relative enrichment in reactive iron over organic matter and/or hydrogen sulfide (because of their high ratio of terrigenous over organic material), which limited pyritization reactions. Within the glacial deposits, formation and preservation of meter-thick greigite layers occurred in terrigenous-rich and organic-poor sedimentary layers and is proposed to result from a similar diagenetic process to that in the Holocene greigite-bearing layers (dominance of reactive iron over organic matter and/or HS�). The terrigenous enrichments in the glacial greigite-bearing layers are probably related to climatic or sea level changes because they occur at times of massive iceberg releases in the North Atlantic, the so-called Heinrich events.

Description: We assessed interrelations between climatic, meteorological and hydrological factors in the Balearic Sea, and identified drivers of the abundance variability of planktonic copepods over the period 1994–2003. Temporal variability in the total abundance of copepods appears to be indicative of the southern spreading of the Northern Current, and therefore of meridional transport of water masses in the Balearic Sea. The results show that the large-scale atmospheric variability in the North Atlantic Ocean acts as a main driver of regional meteorological variations and hydrographic patterns in the Balearic Sea area. The clearly most novel insight from this study is that the effects of the North Atlantic climate on hydrographic variability and the abundance of copepods in the studied area are noticeable at monthly scales. Thus, the North Atlantic climate influence on the structure and biogeochemical fluxes in the Western Mediterranean pelagic ecosystems deserve more attention that they have been received so far.

Description: Valu Fa Ridge is an intraoceanic back-arc spreading center located at the southern prolongation of the Lau basin. Bathymetric observations as well as detailed sampling have been carried out along the spreading axis in order to trace hydrothermal and volcanic activity and to study magma generation processes. The survey shows that widespread lava flows from recent volcanic eruptions covered most of the Vai Lili hydrothermal vent field; only diffuse low-temperature discharge and the formation of thin layers of siliceous precipitates have been observed. Evidence of present-day hydrothermal activity at the Hine Hina site is indicated by a thermal anomaly in the overlying water column. Our studies did not reveal any signs of hydrothermal activity either above the seismically imaged magma chamber at 22°25′S or across the southern rift fault zone (22°51′S). Lavas recovered along the Valu Fa Ridge range from basaltic andesites to rhyolites with SiO2 contents higher than reported from any other intraoceanic back-arc basin. On the basis of the highly variable degrees of crystal fractionation along axis, the development of small disconnected magma bodies is suggested. In addition, the geochemical character of the volcanic rocks shows that the transition zone from oceanic spreading to propagating rifting is located south of the Hine Hina vent field in the vicinity of 22°35′S.

Description: It is widely accepted that climate change constrains biota. Yet, because of the lack of consistent multisite and multitaxon surveys, few studies have addressed general rules about how climate change impacts on structure and diversity of animal communities. Especially, the relative influence of nonclimatic anthropogenic disturbances on this impact is fairly unknown. Here, we present for the first time a meta-analysis assessing the effect of global warming on stream organisms. Fish communities of large rivers in France undergoing various anthropogenic pressures showed significant increase in proportions of warm-water species and of specific richness during the last 15–25 years. Conversely, the equitability decreased, indicating a gradual decrease of the number of dominant species. Finally, the total abundance increased, coupled with rejuvenation and changes in size-structure of the communities. Interestingly, most of these effects were not depressed by the strength of nonclimatic anthropogenic disturbances. Conversely, geographical location of communities and especially closeness of natural barriers to migration could influence their response to climate change. Indeed, increase in the proportion of southern species seemed hindered at sites located close to the southern limit of the European species’ geographical ranges. This work provides new evidence that climate change have deep impacts on communities which, by overtaking the effects of nonclimatic anthropogenic disturbances, could be more substantial than previously thought. Overall, our results stress the importance of considering climate change impacts in studies addressing community dynamics, even in disturbed sites.

Description: Here we present the results of local source tomographic inversion beneath central Java. The data set was collected by a temporary seismic network. More than 100 stations were operated for almost half a year. About 13,000 P and S arrival times from 292 events were used to obtain three-dimensional (3-D) Vp, Vs, and Vp/Vs models of the crust and the mantle wedge beneath central Java. Source location and determination of the 3-D velocity models were performed simultaneously based on a new iterative tomographic algorithm, LOTOS-06. Final event locations clearly image the shape of the subduction zone beneath central Java. The dipping angle of the slab increases gradually from almost horizontal to about 70°. A double seismic zone is observed in the slab between 80 and 150 km depth. The most striking feature of the resulting P and S models is a pronounced low-velocity anomaly in the crust, just north of the volcanic arc (Merapi-Lawu anomaly (MLA)). An algorithm for estimation of the amplitude value, which is presented in the paper, shows that the difference between the fore arc and MLA velocities at a depth of 10 km reaches 30% and 36% in P and S models, respectively. The value of the Vp/Vs ratio inside the MLA is more than 1.9. This shows a probable high content of fluids and partial melts within the crust. In the upper mantle we observe an inclined low-velocity anomaly which links the cluster of seismicity at 100 km depth with MLA. This anomaly might reflect ascending paths of fluids released from the slab. The reliability of all these patterns was tested thoroughly.

Description: Quantification of fluid fluxes from cold seeps depends on accurate estimates of the spatial validity of flux measurements. These estimates are strongly influenced by the choice of geoacoustic mapping tools. Multibeam bathymetry, side-scan sonar, and Chirp subbottom profiler data of several mound-shaped cold seeps offshore central Costa Rica show great variety in morphology and structure although the features are only a few kilometers apart. Mound 11 (a 35 m high and 1000 m in diameter structure), situated in the SE of the study area, has an irregular morphology but a smooth surface on side-scan sonar data, while mound 12 (30 m high, 600 m across) is a cone of more regular outline but with a rough surface, and mound Grillo (5 m high, 500 m across) shows the same rough surface as mound 12 but without relief. Video observations and sediment cores indicate that the structures are formed by the precipitation of authigenic carbonates and indications for extensive mud extrusion are absent, except for one possible mudflow at mound 11. Different sonar frequencies result in variable estimates of the extent of these mounds with low frequencies suggesting much wider cold seeps, consequently overestimating fluid fluxes. The absence of mud volcanism compared to accretionary prisms where mud volcanism occurs is related to different tectonic styles: strong sediment overpressure and thrust faulting in typical accretionary prisms can generate mud volcanism, while subduction erosion and normal faulting (extension) of the overriding plate at the Costa Rican margin result in fluid venting driven by only slight fluid overpressures.

Description: In 2005 an amphibious seismic network was deployed on the Chilean forearc between 41.75°S and 43.25°S. 364 local events were observed in a 11-month period. A subset of the P and S arrival times were inverted for hypocentral coordinates, 1-D velocity structure and station delays. Main seismic activity occurred predominantly in a belt parallel to the coast of Chiloé Island in a depth range of 12–30 km presumably related to the plate interface. The 30° inclination of the shallow part of the Wadati-Benioff zone is similar to observations further north indicating that oceanic plate age is not controlling the subduction angle of the shallower part for the Chilean subduction zone. The down-dip termination of abundant intermediate depth seismicity at approximately 70 km depth seems to be related to the young age (and high temperature) of the oceanic plate. Crustal seismicity is associated with the Liquiñe-Ofqui fault zone and active volcanoes.

Description: We constructed a high-resolution Mg/Ca record on the planktonic foraminifer Globigerinoides sacculifer in order to explore the change in sea surface temperature (SST) due to the shoaling of the Isthmus of Panama as well as the impact of secondary factors like diagenesis and large salinity fluctuations. The study covers the latest Miocene and the early Pliocene (5.6–3.9 Ma) and was combined with δ18O to isolate changes in sea surface salinity (SSS). Before 4.5 Ma, SSTMg/Ca and SSS show moderate fluctuations, indicating a free exchange of surface ocean water masses between the Pacific and the Atlantic. The increase in δ18O after 4.5 Ma represents increasing salinities in the Caribbean due to the progressive closure of the Panamanian Gateway. The increase in Mg/Ca toward values of maximum 7 mmol/mol suggests that secondary influences have played a significant role. Evidence of crystalline overgrowths on the foraminiferal tests in correlation with aragonite, Sr/Ca, and productivity cyclicities indicates a diagenetic overprint on the foraminiferal tests. Laser ablation inductively coupled plasma–mass spectrometry analyses, however, do not show significantly increased Mg/Ca ratios in the crystalline overgrowths, and neither do calculations based on pore water data conclusively result in significantly elevated Mg/Ca ratios in the crystalline overgrowths. Alternatively, the elevated Mg/Ca ratios might have been caused by salinity as the δ18O record of Site 1000 has been interpreted to represent large fluctuations in SSS, and cultivating experiments have shown an increase in Mg/Ca with increasing salinity. We conclude that the Mg/Ca record 〈4.5 Ma can only reliably be considered for paleoceanographical purposes when the minimum values, not showing any evidence of secondary influences, are used, resulting in a warming of central Caribbean surface water masses after 4.5 Ma of ∼2°C.

Description: The nitrogen cycling of Lake Cadagno was investigated by using a combination of biogeochemical and molecular ecological techniques. In the upper oxic freshwater zone inorganic nitrogen concentrations were low (up to ∼3.4 μM nitrate at the base of the oxic zone), while in the lower anoxic zone there were high concentrations of ammonium (up to 40 μM). Between these zones, a narrow zone was characterized by no measurable inorganic nitrogen, but high microbial biomass (up to 4 × 107 cells ml−1). Incubation experiments with 15N-nitrite revealed nitrogen loss occurring in the chemocline through denitrification (∼3 nM N h−1). At the same depth, incubations experiments with 15N2- and 13CDIC-labelled bicarbonate, indicated substantial N2 fixation (31.7–42.1 pM h−1) and inorganic carbon assimilation (40–85 nM h−1). Catalysed reporter deposition fluorescence in situ hybridization (CARD-FISH) and sequencing of 16S rRNA genes showed that the microbial community at the chemocline was dominated by the phototrophic green sulfur bacterium Chlorobium clathratiforme. Phylogenetic analyses of the nifH genes expressed as mRNA revealed a high diversity of N2 fixers, with the highest expression levels right at the chemocline. The majority of N2 fixers were related to Chlorobium tepidum/C. phaeobacteroides. By using Halogen In Situ Hybridization-Secondary Ion Mass Spectroscopy (HISH-SIMS), we could for the first time directly link Chlorobium to N2 fixation in the environment. Moreover, our results show that N2 fixation could partly compensate for the N loss and that both processes occur at the same locale at the same time as suggested for the ancient Ocean.

Description: At convergent margins, the structure of the subducting oceanic plate is one of the key factors controlling the morphology of the upper plate. We use high-resolution seafloor mapping and multichannel seismic reflection data along the accretionary Sumatra trench system to investigate the morphotectonic response of the upper plate to the subduction of lower plate fabric. Upper plate segmentation is reflected in varying modes of mass transfer. The deformation front in the southern Enggano segment is characterized by neotectonic formation of a broad and shallow fold-and-thrust belt consistent with the resumption of frontal sediment accretion in the wake of oceanic relief subduction. Conversely, surface erosion increasingly shapes the morphology of the lower slope and accretionary prism towards the north where significant oceanic relief is subducted. Subduction of the Investigator Fracture Zone and the fossil Wharton spreading centre in the Siberut segment exemplifies this. Such features also correlate with an irregularly trending deformation front suggesting active frontal erosion of the upper plate. Lower plate fabric extensively modulates upper plate morphology and the large-scale morphotectonic segmentation of the Sumatra trench system is linked to the subduction of reactivated fracture zones and aseismic ridges of the Wharton Basin. In general, increasing intensity of mass-wasting processes, from south to north, correlates with the extent of oversteepening of the lower slope (lower slope angle of 3.8 degrees in the south compared with 7.6 degrees in the north), probably in response to alternating phases of frontal accretion and sediment underthrusting. Accretionary mechanics thus pose a second-order factor in shaping upper plate morphology near the trench.

Description: New 3-D seismic investigations carried out across the Sevastopol mud volcano in the Sorokin Trough present 3-D seismic data of a mud volcano in the Black Sea for the first time. The studies allow us to image the complex three-dimensional morphology of a collapse structured mud volcano and to propose an evolution model. The Sevastopol mud volcano is located above a buried diapiric structure with two ridges and controlled by fluid migration along a deep fault system, which developed during the growth of the diapirs in a compressional tectonic system. Overpressured fluids initiated an explosive eruption generating the collapse depression of the Sevastopol mud volcano. Several cones were formed within the depression by subsequent quiet mud extrusions. Although gas hydrates have been recovered at various mud volcanoes in the Sorokin Trough, no gas hydrates were sampled at the Sevastopol mud volcano. A BSR (bottom-simulating reflector) is missing in the seismic data; however, high-amplitude reflections (bright spots) observed above the diapiric ridge near the mud volcano at a relatively constant depth correspond to the approximate depth of the base of the gas hydrate stability zone (BGHSZ). Thus we suggest that gas hydrates are present locally where gas/fluid flow occurs related to mud volcanism, i.e., above the diapir and close to the feeder channel of the mud volcano. Depth variations of the bright spots of up to 200 ms TWT might be caused by temperature variations produced by variable fluid flow.

Description: Time series of transports in the Agulhas region have been constructed by simulating Lagrangian drifter trajectories in a 1/10 degree two-way nested ocean model. Using these 34 year long time series it is shown that smaller (larger) Agulhas Current transport leads to larger (smaller) Indian-Atlantic inter-ocean exchange. When transport is low, the Agulhas Current detaches farther downstream from the African continental slope. Moreover, the lower inertia suppresses generation of anti-cyclonic vorticity. These two effects cause the Agulhas retroflection to move westward and enhance Agulhas leakage. In the model a 1 Sv decrease in Agulhas Current transport at 32 degrees S results in a 0.7 +/- 0.2 Sv increase in Agulhas leakage

Description: The distribution of egg masses of the freshwater snails Lymnaea stagnalis and Planorbarius corneus on the undersides of water lily leaves (e.g. Nuphar lutea) is related to the prevalence of the leaf-mining beetle Galerucella nymphaeae. When given the choice, Planorbarius significantly avoids leaves that were infested by the mining beetle. Conversely, Lymnaea did not discriminate against mined leaves. Intact Nuphar leaves block over 95% of incident ultraviolet radiation. Yet, ultraviolet transmission reaches almost 100% under beetle mining scars. These are several times wider than snail embryos. When exposed to natural sunlight, Lymnaea embryos proved to be resistant to ambient ultraviolet, while Planorbarius embryos were rapidly killed. Thus, one selective advantage of Planorbarius discrimination against mined leaves when depositing its eggs could be the avoidance of ultraviolet radiation passing through mining scars. Other mining-related modifications of the leaves, reduced area, decreased longevity, altered aufwuchs (i.e. biofilm and epibionts) are discussed but seem less relevant for the oviposition preference of Planorbarius. The discriminatory behaviour of this snail species was triggered by water-borne cues emitted by the damaged leaf, not by the eggs or larvae of the beetle. This study illustrates how environmental stress on a given species, ultraviolet radiation in this case, can be ecologically buffered (shading by Nuphar) or enhanced (reduction of Nuphar shading through beetle mining) by associated species. It highlights how the impact of a given stress depends on the identity of the target species as well as on the identity and role of other species in the community.