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  • Articles  (44,331)
  • Other Sources  (283)
  • Nature Publishing Group  (44,416)
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  • Articles  (44,331)
  • Other Sources  (283)
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  • 1
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    Prolonged mantle residence of zircon xenocrysts from the western Eger rift (2009)
    Nature Publishing Group
    In:  Nature Geoscience, 2 (12). pp. 886-890.
    Details
    Publication Date: 2018-01-04
    Description: Zircon is a common mineral in continental crustal rocks. As it is not easily altered in processes such as erosion or transport, this mineral is often used in the reconstruction of geological processes such as the formation and evolution of the continents. Zircon can also survive under conditions of the Earth’s mantle, and rare cases of zircons crystallizing in the mantle significantly before their entrainment into magma and eruption to the surface have been reported1,2,3. Here we analyse the isotopic and trace element compositions of large zircons of gem quality from the Eger rift, Bohemian massif, and find that they are derived from the mantle. (U–Th)/He analyses suggest that the zircons as well as their host basalts erupted between 29 and 24 million years ago, but fragments from the same xenocrysts reveal U–Pb ages between 51 and 83 million years. We note a lack of older volcanism and of fragments from the lower crust, which suggests that crustal residence time before eruption is negligible and that most rock fragments found in similar basalts from adjacent volcanic fields equilibrated under mantle conditions. We conclude that a specific chemical environment in this part of the Earth’s upper mantle allowed the zircons to remain intact for about 20–60 million years.
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  • 2
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    Assessing evidence for random assembly of marine benthic communities from regional species pools (2009)
    Inter Research
    In:  Marine Ecology Progress Series, 382 . pp. 279-286.
    Details
    Publication Date: 2018-06-01
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  • 3
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    Effects of rising temperature on the formation and microbial degradation of marine diatom aggregates (2009)
    Inter Research
    In:  Aquatic Microbial Ecology, 54 . pp. 305-318.
    Details
    Publication Date: 2019-09-23
    Description: Effects of elevated temperature on the formation and subsequent degradation of diatom aggregates were studied in a laboratory experiment with a natural plankton community from the Kiel Fjord (Baltic Sea). Aggregates were derived from diatom blooms that developed in indoor mesocosms at 2.5 and 8.5 degrees C, corresponding to the 1993 to 2002 mean winter in situ temperature of the Western Baltic Sea and the projected sea surface temperature during winter in 2100, respectively. Formation and degradation of diatom aggregates at these 2 temperatures in the dark were promoted with roller tanks over a period of 11 d. Comparison of the 2 temperature settings revealed an enhanced aggregation potential of diatom cells at elevated temperature, which was likely induced by an increased concentration of transparent exopolymer particles (TEP). The enhanced aggregation potential led to a significantly higher proportion of particulate organic matter in aggregates at 8.5 degrees C. Moreover, the elevated temperature favoured the growth of bacteria, bacterial biomass production, and the activities of sugar- and protein-degrading extracellular enzymes in aggregates. Stimulating effects of rising temperature on growth and metabolism of the bacterial community resulted in an earlier onset of aggregate degradation and silica dissolution. Remineralization of carbon in aggregates at elevated temperature was partially compensated by the formation of carbon-rich TEP during dark incubation. Hence, our results suggest that increasing temperature will affect both formation and degradation of diatom aggregates. We conclude that the vertical export of organic matter through aggregates may change in the future, depending on the magnitude and vertical depth penetration of warming in the ocean.
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  • 4
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    Chain model of phytoplankton P, N and light colimitation (2009)
    Inter Research
    In:  Marine Ecology Progress Series, 376 .
    Details
    Publication Date: 2018-06-01
    Description: Models of multiple potentially limiting nutrients currently employ either multiplicative or threshold formulations, neither of which has a sound mechanistic explanation. Despite experimental evidence that lack of P severely constrains N assimilation, this mechanism has not been considered for constructing models of multi-nutrient limitation. We construct a phytoplankton optimal growth model linking C, chlorophyll (Chl), N, and P through a limitation chain in which P limits N assimilation, N limits photosynthesis and photosynthesis limits growth. The resulting formulation possesses characteristics of both multiplicative and threshold approaches and provides a mechanistic foundation for modelling multi-nutrient and light limitation of phytoplankton growth. The model compares well with experimental observations for a variety of unicellular phytoplankton species. It is suggested that the widely held view that N and P limitation act independently of each other is based on an invalid interpretation of experimental observations and that the transition from N to P limitation occurs over a wide range of colimitation rather than a sharply-defined transition point. If the species considered in this study are representative for marine phytoplankton, our model results indicate that most phytoplankton are colimited by N and P when inorganic N and P are simultaneously exhausted in the surface ocean. The model suggests that the close match between marine inorganic (Redfield) and phytoplankton N:P ratios results from optimal nutrient utilisation but does not indicate optimality of Redfield N:P.
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  • 5
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    Flexible foraging tactics by a large opportunistic seabird preying on forage- and large pelagic fishes (2009)
    Inter Research
    In:  Marine Ecology Progress Series, 385 . pp. 295-306.
    Details
    Publication Date: 2018-06-01
    Description: Generalist and opportunistic marine predators use flexible foraging behaviour to exploit prey bases that change in diversity and spatial and temporal distributions, Behavioural flexibility is constrained by characteristics Such as individual cognitive and physical capabilities, age, reproductive condition and central place foraging. To assess flexibility in the foraging tactics of a marine bird, we investigated the diets and foraging behaviour of the largest seabird predator in the North Atlantic Ocean. Northern gannets Sula bassana exploit abroad spectrum of pelagic prey that range in mass by more than 2 orders of magnitude, We investigated their foraging activity at their largest. offshore colony in the western Atlantic Ocean during 1998 to 2002, when they preyed primarily on shoals of spawning and post-spawning capelin Mallotus villosus, a small forage fish (similar to 15 g), and also on a much larger pelagic fish, post-smolt Atlantic salmon Salmo salar (similar to 200 g). Inter-annual dietary variation is associated with gannet and prey fish distributions. Landings of capelin at the colony by gannets were correlated with returns of larger foraging flocks from inshore, whereas landings of Atlantic salmon were associated with smaller flocks returning from offshore. Maximum foraging trip distances ranged from 20 to 200 km and averaged 57 +/- 12 (SE) km, consistent with distances to inshore capelin aggregations. When capelin abundance was low (in 2002), more gannets foraged offshore, preyed on large pelagic fishes (mostly Atlantic salmon) and exhibited the greatest dietary diversity. Though the Outbound portions of foraging trips were more sinuous than inbound routes, individual gannets exhibited general fidelity to foraging sites. These large avian predators used flexible foraging tactics to adjust to changing prey conditions and generate longer-term strategies to Lake advantage of diverse trophic interactions over a range of ocean ecosystems.
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  • 6
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    Individual migratory schedules and wintering areas of northern gannets (2009)
    Inter Research
    In:  Marine Ecology Progress Series, 391 . pp. 257-265.
    Details
    Publication Date: 2018-06-01
    Description: Individual migratory schedules and wintering areas of northern gannets Morus bassanus were studied over 2 consecutive winters by deploying geolocation data loggers on breeding adults from the Bass Rock, UK. Northern gannets attended the breeding colony on Bass Rock until between 24 September and 16 October (median: 5 October). Afterwards, individual birds engaged in different migratory behaviour. Of the 22 birds tracked until at least December, 18% wintered in the North Sea and the English Channel, 27% in the Bay of Biscay and the Celtic Sea, 9% in the Mediterranean Sea and 45% off West Africa. Individual winter home ranges as measured by the 75% kernel density contours varied between 8 100 and 308 500 km(2) (mean = 134 000 km(2)). Several northern gannets migrated northwards from Bass Rock after leaving the colony for a stay of a few days to a few weeks, independent of whether they migrated to Africa or other southern areas later. Birds wintering off West Africa migrated to their wintering areas mostly within 3 to 5 wk, usually starting between early and late October. Most of these birds stayed off West Africa for a period of about 3 mo, where they remained in a relatively restricted area. Return migration was initiated between the end of January and mid-February, and took about as long as autumn migration. We conclude that individual gannets display very variable migratory behaviours, with discrete winter home ranges, and we infer that the migration habits of gannets may be changing in response to human impacts on marine ecosystems.
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  • 7
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    Effects of hydrographic and meteorological factors on seasonal seabird abundance in the southern North Sea (2009)
    Inter Research
    In:  Marine Ecology Progress Series, 391 . pp. 243-255.
    Details
    Publication Date: 2018-06-01
    Description: We examined the influence of both season and hydrographic and meteorological factors on seabird abundance in the southern North Sea. Seabirds were counted from ships in a study area of 27.8 x 32.8 km on 407 d from 1990 to 2007. Two hydrographic and 5 meteorological parameters were taken from archived data. The relationships between bird abundance and abiotic parameters were investigated by generalised additive models for 3 distinct seasons. The species in the study area exhibited different seasonal patterns. While some species were present year-round, others occurred only at certain periods. Despite these substantial changes in abundances, the nature of the interactions between bird abundances and abiotic parameters did not vary much between seasons. All 5 meteorological and 2 hydrographic parameters significantly influenced the abundance of seabird species, though to a different degree. The single factors that most often had a significant influence in the single models were wind field, sea surface temperature anomaly, sea surface salinity anomaly and air pressure change. The quantitative composition of the seabird community differed significantly between onshore wind and offshore wind conditions. It is assumed that hydrographic parameters are relevant for the birds by determining their foraging habitats and that atmospheric parameters influence flight conditions during foraging and migration.
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  • 8
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    Piceamycin and its N-acetylcysteine adduct is produced by Streptomyces sp GB 4-2 (2009)
    Nature Publishing Group
    In:  Journal of Antibiotics, 62 (9). pp. 513-518.
    Details
    Publication Date: 2019-09-23
    Description: Piceamycin, a new macrolactam polyketide antibiotic, was detected by HPLC-diode array screening in extracts of Streptomyces sp. GB 4-2, which was isolated from the mycorrhizosphere of Norway spruce. The structure of piceamycin was determined by mass spectrometry and NMR experiments. It showed inhibitory activity against Gram-positive bacteria, selected human tumor cell lines and protein tyrosine phosphatase 1B. The Journal of Antibiotics (2009) 62, 513-518; doi:10.1038/ja.2009.64; published online 17 July 2009
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  • 9
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    Consumer diversity indirectly changes prey nutrient content (2009)
    Inter Research
    In:  Marine Ecology Progress Series, 380 . pp. 33-41.
    Details
    Publication Date: 2018-06-01
    Description: Ecological stoichiometry can be a powerful tool to understand food web consequences of altered biogeochemical cycles as well as consequences of biodiversity loss on biogeochemistry and has proved to be a suitable framework to predict effects of consumers on the nutrient content of their prey. However, predictions from ecological stoichiometry have mainly been tested using single consumer species, whereas in most natural ecosystems several consumer species coexist. We conducted 2 outdoor mesocosm experiments with marine rock pool communities to test whether species richness and species combination of benthic invertebrates affected the nutrient content of periphyton. We independently manipulated 12 different consumer combinations ranging from 0 to 6 (2004) or 0 to 4 (2005) grazer species and measured the biomass and nutrient content of the algae. Grazers included 3 gastropods and 3 crustaceans. In 2005, we additionally analyzed animal nutrient content and N excretion rate. Algal biomass and C:N ratios decreased in the presence of grazers in both years, indicating that the remaining algae had higher internal N content. Also, both biomass (2004 and 2005) and C:N ratios (only 2004) decreased even further when grazer richness increased. In 2004, significant net diversity effects of grazer richness on periphyton C:N ratios indicated that periphyton N content under multispecies grazing could not be predicted from the effect of single species. In 2005, significant net diversity effects on C:N ratios were rare, but periphyton C:N ratios consistently decreased with increasing grazer excretion rate, indicating that higher nitrogen regeneration by grazers led to higher N incorporation by algae. The effects of species richness were mainly affected by the presence of one efficient grazer, the gastropod Littorina littorea. Our experiments indicate that non-additive intraguild interactions may qualitatively alter the stoichiometric effects of multispecies consumer assemblages.
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  • 10
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    Marine geophysics: Where there's smoke there's fire (2009)
    Nature Publishing Group
    In:  Nature Geoscience, 2 (7). pp. 463-464.
    Details
    Publication Date: 2015-07-10
    Description: Seafloor vents spewing mineral-rich plumes of hydrothermal fluid — termed black smokers — can persist at mid-ocean ridges for decades or longer. Earthquake data indicate that ongoing magma injection may determine their locations.
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  • 11
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    Consequences of light reduction for anti-herbivore defense and bioactivity against mussels in four seaweed species from northern-central Chile (2009)
    Inter Research
    In:  Marine Ecology Progress Series, 381 . pp. 83-97.
    Details
    Publication Date: 2018-06-01
    Description: It is widely assumed that the production of secondary metabolites against grazing and fouling is costly for seaweeds in terms of metabolic energy and should therefore be reduced under conditions of resource limitation. Here we tested the hypothesis that anti-herbivore defenses and bioactivity against mussels in 4 brown seaweeds from northern-central Chile will be reduced when light is limited. In a 2 wk experiment, seaweeds were kept under different low-light conditions (~76 to 99% reduction of ambient sunlight) and grazing situations. Subsequently, we tested their anti-herbivore defense against a common amphipod grazer in feeding assays with living algal tissue and reconstituted food pellets. A standard test employing the production of byssus threads by mussels was furthermore used as an indicator for deterrents in crude algal extracts. All investigated seaweeds showed decreased growth under the stepwise light reduction. Lessonia nigrescens exhibited reduced defense ability under severe low-light conditions when living tissue was offered to the amphipod, probably caused by changes in the tissue structure or in nutritional traits. In Dictyota kunthii, L. trabeculata and Macrocystis integrifolia this effect was absent. None of the investigated seaweeds showed a clear effect of light reduction on chemically mediated defenses against the mesograzer and there was no effect of light limitation on the bioactivity against mussels. Thus, against general assumptions, chemical defense in the investigated seaweeds does not appear to be reduced under severe resource limitation. Results suggest that seaweeds may use different strategies of energy allocation to cope with low-light conditions.
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  • 12
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    Clean air policy and Arctic warming (2009)
    Nature Publishing Group
    In:  Nature Geoscience, 2 (4). pp. 243-244.
    Details
    Publication Date: 2019-09-23
    Description: The enhanced Arctic warming over the past three decades is attracting much attention. Combining forward and inverse models with observations suggests that regional changes in aerosol concentrations have contributed significantly.
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  • 13
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    MacroBen integrated database on benthic invertebrates of European continental shelves: a tool for large-scale analysis across Europe (2009)
    Inter Research
    In:  Marine Ecology Progress Series, 382 . pp. 225-238.
    Details
    Publication Date: 2018-06-01
    Description: We describe an integrated database on European macrobenthic fauna, developed within the framework of the European Network of Excellence MarBEF, and the data and data integration exercise that provided its content. A total of 44 datasets including 465354 distribution records from soft-bottom macrobenthic species were uploaded into the relational MacroBen database, corresponding to 22897 sampled stations from all European seas, and 7203 valid taxa. All taxonomic names were linked to the European Register of Marine Species, which was used as the taxonomic reference to standardise spelling and harmonise synonymy. An interface was created, allowing the user to explore, subselect, export and analyse the data by calculating different indices. Although the sampling techniques and intended use of the datasets varied tremendously, the integrated database proved to be robust, and an important tool for studying and understanding large-scale long-term distributions and abundances of marine benthic life. Crucial in the process was the willingness and the positive data-sharing attitude of the different data contributors. Development of a data policy that is highly aware of sensitivities and ownership issues of data providers was essential in the creation of this goodwill.
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  • 14
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    Biogeochemistry of a deep-sea whale fall: sulfate reduction, sulfide efflux and methanogenesis (2009)
    Inter Research
    In:  Marine Ecology Progress Series, 382 . pp. 1-21.
    Details
    Publication Date: 2019-07-03
    Description: Deep-sea whale falls create sulfidic habits Supporting chemoautotrophic communities, but microbial processes underlying the formation Of Such habitats remain poorly evaluated. Microbial degradation processes (sulfate reduction, methanogenesis) and biogeochemical gradients were studied in a whale-fall habitat created by a 30 t whale carcass deployed at 1675 m depth for 6 to 7 yr on the California margin. A variety of measurements were conducted including photomosaicking, microsensor measurements, radio-tracer incubations and geochemical analyses. Sediments were Studied at different distances (0 to 9 in) from the whale fall. Highest microbial activities and steepest vertical geochemical gradients were found within 0.5 m of the whale fall, revealing ex situ sulfate reduction and in vitro methanogenesis rates of up to 717 and 99 mmol m(-2) d(-1), respectively. In sediments containing whale biomass, methanogenesis was equivalent to 20 to 30%, of sulfate reduction. During in vitro sediment studies, sulfide and methane were produced within days to weeks after addition of whale biomass, indicating that chemosynthesis is promoted at early stages of the whale fall. Total sulfide production from sediments within 0.5 m of the whale fall was 2.1 +/- 3 and 1.5 +/- 2.1 mol d(-1) in Years 6 and 7, respectively, of which similar to 200 mmol d(-1) were available as free sulfide. Sulfate reduction in bones was much lower, accounting for a total availability of similar to 10 mmol sulfide d(-1). Over periods of at least 7 yr, whale falls can create sulfidic conditions similar to other chemosynthetic habitats Such as cold seeps and hydrothermal vents.
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  • 15
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    Increase in Agulhas leakage due to poleward shift of Southern Hemisphere westerlies (2009)
    Nature Publishing Group
    In:  Nature, 462 . pp. 495-498.
    Details
    Publication Date: 2019-09-23
    Description: The transport of warm and salty Indian Ocean waters into the Atlantic Ocean—the Agulhas leakage—has a crucial role in the global oceanic circulation1 and thus the evolution of future climate. At present these waters provide the main source of heat and salt for the surface branch of the Atlantic meridional overturning circulation (MOC)2. There is evidence from past glacial-to-interglacial variations in foraminiferal assemblages3 and model studies4 that the amount of Agulhas leakage and its corresponding effect on the MOC has been subject to substantial change, potentially linked to latitudinal shifts in the Southern Hemisphere westerlies5. A progressive poleward migration of the westerlies has been observed during the past two to three decades and linked to anthropogenic forcing6, but because of the sparse observational records it has not been possible to determine whether there has been a concomitant response of Agulhas leakage. Here we present the results of a high-resolution ocean general circulation model7, 8 to show that the transport of Indian Ocean waters into the South Atlantic via the Agulhas leakage has increased during the past decades in response to the change in wind forcing. The increased leakage has contributed to the observed salinification9 of South Atlantic thermocline waters. Both model and historic measurements off South America suggest that the additional Indian Ocean waters have begun to invade the North Atlantic, with potential implications for the future evolution of the MOC.
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  • 16
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    Generation of intermediate-depth earthquakes by self-localizing thermal runaway (2009)
    Nature Publishing Group
    In:  Nature Geoscience, 2 . pp. 137-140.
    Details
    Publication Date: 2019-09-23
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  • 17
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    Mid-Pliocene climate change amplified by a switch in Indonesian subsurface throughflow (2009)
    Nature Publishing Group
    In:  Nature Geoscience, 2 . pp. 434-438.
    Details
    Publication Date: 2019-09-23
    Description: The tectonically driven closure of tropical seaways during the Pliocene epoch (approx5–2 million years (Myr) ago) altered ocean circulation and affected the evolution of climate. Plate tectonic reconstructions show that the main reorganization of one such seaway, the Indonesian Gateway, occurred between 4 and 3 Myr ago. Model simulations have suggested that this would have triggered a switch in the source of waters feeding the Indonesian throughflow into the Indian Ocean, from the warm salty waters of the South Pacific Ocean to the cool and relatively fresh waters of the North Pacific Ocean. Here we use paired measurements of the delta18O and Mg/Ca ratios of planktonic foraminifera to reconstruct the thermal structure of the eastern tropical Indian Ocean from 5.5 to 2 Myr ago. We find that sea surface conditions remained relatively stable throughout the interval, whereas subsurface waters freshened and cooled by about 4 °C between 3.5 and 2.95 Myr ago. We suggest that the restriction of the Indonesian Gateway led to the cooling and shoaling of the thermocline in the tropical Indian Ocean. We conclude that this tectonic reorganization contributed to the global shoaling of the thermocline recorded during the Pliocene epoch, possibly contributing to the development of the equatorial eastern Pacific cold tongue.
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  • 18
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    Continental-scale patterns in benthic invertebrate diversity: insights from the MacroBen database (2009)
    Inter Research
    In:  Marine Ecology Progress Series, 382 . pp. 239-252.
    Details
    Publication Date: 2018-06-01
    Description: Latitudinal clines in species diversity in limnic and terrestrial habitats have been noted for well over a century and are consistent across many taxonomic groups. However, studies in marine systems over the past 2 to 3 decades have yielded equivocal results. We conducted initial analyses of the MarBEF (EU Network of Excellence for Marine Biodiversity and Ecosystem Function) database to test for trends in local and regional diversity over the latitudinal extent of European continental-shelf waters (36° to 81°N). Soft-sediment benthic macrofauna exhibit little evidence of a latitudinal cline in local (α-) diversity measures. Relationships with water depth were relatively strong and complex. Statistically significant latitudinal trends were small and positive, suggesting a modest increase in diversity with latitude once water-depth covariates were removed. These results are consistent regardless of whether subsets of the database were used, replicates were pooled, or component taxonomical groups were evaluated separately. Local and regional diversity measures were significantly and positively correlated. Scientific cooperation through data-sharing is a powerful tool with which to address fundamental ecological and evolutionary questions relating to large-scale patterns and processes.
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  • 19
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    Large-scale distribution of Atlantic nitrogen fixation controlled by iron availability (2009)
    Nature Publishing Group
    In:  Nature Geoscience, 2 . pp. 867-871.
    Details
    Publication Date: 2017-02-22
    Description: Oceanic fixed-nitrogen concentrations are controlled by the balance between nitrogen fixation and denitrification. A number of factors, including iron limitation, can restrict nitrogen fixation, introducing the potential for decoupling of nitrogen inputs and losses. Such decoupling could significantly affect the oceanic fixed-nitrogen inventory and consequently the biological component of ocean carbon storage and hence air–sea partitioning of carbon dioxide. However, the extent to which nutrients limit nitrogen fixation in the global ocean is uncertain. Here, we examined rates of nitrogen fixation and nutrient concentrations in the surface waters of the Atlantic Ocean along a north–south 10,000 km transect during October and November 2005. We show that rates of nitrogen fixation were markedly higher in the North Atlantic compared with the South Atlantic Ocean. Across the two basins, nitrogen fixation was positively correlated with dissolved iron and negatively correlated with dissolved phosphorus concentrations. We conclude that inter-basin differences in nitrogen fixation are controlled by iron supply rather than phosphorus availability. Analysis of the nutrient content of deep waters suggests that the fixed nitrogen enters North Atlantic Deep Water. Our study thus supports the suggestion that iron significantly influences nitrogen fixation5, and that subsequent interactions with ocean circulation patterns contribute to the decoupling of nitrogen fixation and loss.
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  • 20
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    Biological geography of the European seas: results from the MacroBen database (2009)
    Inter Research
    In:  Marine Ecology Progress Series, 382 . pp. 265-278.
    Details
    Publication Date: 2018-06-01
    Description: This study examines whether or not biogeographical and/or managerial divisions across the European seas can be validated using soft-bottom macrobenthic community data. The faunal groups used were: all macrobenthos groups, polychaetes, molluscs, crustaceans, echinoderms, sipunculans and the last 5 groups combined. In order to test the discriminating power of these groups, 3 criteria were used: (1) proximity, which refers to the expected closer faunal resemblance of adjacent areas relative to more distant ones; (2) randomness, which in the present context is a measure of the degree to which the inventories of the various sectors, provinces or regions may in each case be considered as a random sample of the inventory of the next largest province or region in a hierarchy of geographic scales; and (3) differentiation, which provides a measure of the uniqueness of the pattern. Results show that only polychaetes fulfill all 3 criteria and that the only marine biogeographic system supported by the analyses is the one proposed by Longhurst (1998). Energy fluxes and other interactions between the planktonic and benthic domains, acting over evolutionary time scales, can be associated with the multivariate pattern derived from the macrobenthos datasets. Third-stage multidimensional scaling ordination reveals that polychaetes produce a unique pattern when all systems are under consideration. Average island distance from the nearest coast, number of islands and the island surface area were the geographic variables best correlated with the community patterns produced by polychaetes. Biogeographic patterns suggest a vicariance model dominating over the founder-dispersal model except for the semi-closed regional seas, where a model substantially modified from the second option could be supported.
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  • 21
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    Seabed methane emissions and the habitat of frenulate tubeworms on the Captain Arutyunov mud volcano (Gulf of Cadiz) (2009)
    Inter Research
    In:  Marine Ecology Progress Series, 382 . pp. 69-86.
    Details
    Publication Date: 2018-06-01
    Description: Submarine mud volcanism represents an important. pathway for methane from deeper reservoirs to the surface, where it enters the benthic carbon cycle. To quantify overall methane release from the Captain Arutyunov mud volcano (CAMV) and to assess the contribution of macrobenthic seep organisms to the regulation of the benthic methane flux, we linked water column methane concentrations, seabed methane emission and pore water geochemistry to the spatial distribution of seep biota. Prominent organisms of the CAMV seep biota were 3 different species of frenulate tubeworms. Seabed methane emission ranged from 0.001 to 0.66 mmol m(-2) d(-1). Dense patches of tubeworms were associated with the lowest seabed methane emission. Elevated methane emission was associated with a sporadic distribution of tubeworms and the occurrence of numerous mud clasts. Despite the presence of a large subsurface methane reservoir, the estimated total methane release from CAMV was low (0.006 x 10(6) mol yr(-1)). In addition to direct methane consumption by Siboglinum poseidoni, the tubeworms likely contribute to the retention of methane carbon in the sediment by affecting bacterial communities in the proximity of the tubes. The siboglinids create new meso-scale habitats on the sediment Surface, increasing habitat heterogeneity and introducing niches for bacterial communities.
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  • 22
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    Caboxamycin, a new antibiotic of the benzoxazole family produced by the deep-sea strain Streptomyces sp. NTK 937* (2009)
    Nature Publishing Group
    In:  Journal of Antibiotics, 62 . pp. 99-104.
    Details
    Publication Date: 2019-09-23
    Description: Caboxamycin, a new benzoxazole antibiotic, was detected by HPLC-diode array screening in extracts of the marine strain Streptomyces sp. NTK 937, which was isolated from deep-sea sediment collected in the Canary Basin. The structure of caboxamycin was determined by mass spectrometry, NMR experiments and X-ray analysis. It showed inhibitory activity against Gram-positive bacteria, selected human tumor cell lines and the enzyme phosphodiesterase.
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  • 23
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    Gombapyrones, new α-pyrone metabolites produced by Streptomyces griseoruber Acta 3662 (2009)
    Nature Publishing Group
    In:  Journal of Antibiotics, 62 . pp. 445-452.
    Details
    Publication Date: 2019-09-23
    Description: Gombapyrones A–D, new members of the α-pyrone family of secondary metabolites, were produced by Streptomyces griseoruber Acta 3662, which was isolated from bamboo tree rhizosphere. The strain was characterized by its morphological and chemotaxonomical features and by 16S rDNA sequencing as S. griseobuber. The gombapyrone structures were determined by mass spectrometry and by NMR experiments, and were found to have an inhibitory activity against protein tyrosine phosphatase 1B and glycogen synthase kinase 3β.
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  • 24
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    Specific epibacterial communities on macroalgae: phylogeny matters more than habitat (2009)
    Inter Research
    In:  Aquatic Biology, 5 . pp. 181-186.
    Details
    Publication Date: 2019-09-23
    Description: Epibacterial communities on thalli of the algal species Fucus serratus, Fucus vesiculosus, Laminaria saccharina, Ulva compressa, Delesseria sanguinea and Phycodrys rubens were analysed using 16S ribosomal RNA gene-based DGGE. Individuals of all species were collected in the Kiel Fjord (Baltic Sea) and in the rocky intertidal of Helgoland (North Sea). DGGE gels as well as cluster and multidimensional scaling analysis based on the DGGE band patterns of the epibacterial community showed significant differences between the epibacterial communities on the investigated algal species both in the Baltic and North Seas. Epibacterial communities differed less between regions than between host species, and were more similar on closely related host species. Results give the first evidence for lineage-specific bacterial associations to algal thalli. Furthermore, the results suggest that these algal species may control their epibiotic bacterial communities.
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  • 25
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    Origin and evolution of a splay fault in the Nankai accretionary wedge (2009)
    Nature Publishing Group
    In:  Nature Geoscience, 2 . pp. 648-652.
    Details
    Publication Date: 2017-02-22
    Description: Subduction zones are often characterized by wedge-shaped sedimentary complexes—called accretionary prisms—that form when sediments are scraped off the subducting plate and added to the overriding plate. Large, landward-dipping thrust faults can cut through such a prism: these faults, known as 'megasplay faults'1, 2, originate near the top of the subducting plate and terminate at the shallow, landward edge of the prism1, 3, 4, 5, 6. Megasplay faults have been the subject of numerous geological and geophysical studies4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, but their initiation and evolution through time remains poorly constrained. Here we combine seismic reflection data from the Nankai accretionary wedge with geological data collected by the Integrated Ocean Drilling Program (IODP) and find that the splay fault cutting this wedge initiated approx1.95 Million years (Myr) ago in the lower part of the prism as an out-of-sequence thrust (OOST). After an initial phase of high activity, the movement along the fault slowed down, but uplift and reactivation of the fault resumed about 1.55 Myr ago. The alternating periods of high and low activity along the splay fault that we document hint at episodic changes in the mechanical stability of accretionary prisms.
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  • 26
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    The otherness of the oceans (2009)
    Nature Publishing Group
    In:  Nature, 459 (7244). pp. 166-167.
    Details
    Publication Date: 2019-03-08
    Description: As scientists discover more about the genomes of marine microorganisms, new views of their physiology and ecosystem networks are opening up, explain Alexandra Z. Worden and Darcy McRose. "Alien Ocean: Anthropological Voyages in Microbial Seas by Stefan Helmreich University of California Press: 2009. 464 pp."
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  • 27
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    Protists are microbes too: A perspective (2009)
    Nature Publishing Group
    In:  The ISME Journal, 3 (1). pp. 4-12.
    Details
    Publication Date: 2019-09-24
    Description: Our understanding of the composition and activities of microbial communities from diverse habitats on our planet has improved enormously during the past decade, spurred on largely by advances in molecular biology. Much of this research has focused on the bacteria, and to a lesser extent on the archaea and viruses, because of the relative ease with which these assemblages can be analyzed and studied genetically. In contrast, single-celled, eukaryotic microbes (the protists) have received much less attention, to the point where one might question if they have somehow been demoted from the position of environmentally important taxa. In this paper, we draw attention to this situation and explore several possible (some admittedly lighthearted) explanations for why these remarkable and diverse microbes have remained largely overlooked in the present era of the microbe. © 2009 International Society for Microbial Ecology All rights reserved.
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  • 28
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    Vertical distribution, behavior, chemical composition and metabolism of Stauroteuthis syrtensis (Octopoda: Cirrata) in the northwest Atlantic (2009)
    Inter Research
    In:  Aquatic Biology, 5 . pp. 13-22.
    Details
    Publication Date: 2021-08-10
    Description: The cirrate octopod Stauroteuthis syrtensis is a mesopelagic species commonly collected in the North Atlantic. Individuals were observed at depths 〉600 m and typically within 100 m of the bottom in three ~900 m deep canyons indenting the southern edge of Georges Bank. When first sighted, most octopods were floating passively with their webbed arms gathered into a small ball. When disturbed, they expanded their webs to form a ‘balloon’ shape, swam slowly by sculling their fins, pulsed their webs like medusae and, in some cases, streamlined their arms and webs and moved away smoothly by rapidly sculling their fins. The bodies of 9 octopods comprised 92 to 95% water, with tissue containing 9 to 22% carbon (C) and 2 to 4% nitrogen (N). These values were similar to those reported for medusae and ctenophores. Oxygen (O2) consumption rates of 4.6 to 25.8 µmol O2 g–1 C h–1 were within ranges reported for medusae, ctenophores, and deep-water cephalopods. The stomachs of S. syrtensis, dissected immediately after capture, contained only the calanoid copepod Calanus finmarchicus. Calculations indicated that S. syrtensis need 1.3 to 30.1 ind. d–1 of C. finmarchicus to meet their measured metabolic demand. Excretion rates (0.3 to 12.4 µg NH4+ g–1 C h–1 and 0.06 to 4.83 µg PO43– g–1 C h–1) were at least an order of magnitude lower than rates reported for other octopods or gelatinous zooplankters. O:N ratios (11 to 366) suggested that S. syrtensis catabolized lipids, which may be supplied by C. finmarchicus. Vertical distribution, relatively torpid behavior and low metabolic rates characterized S. syrtensis as a benthopelagic and relatively passive predator on copepods.
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  • 29
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    Life history of the neon flying squid: effect of the oceanographic regime in the North Pacific Ocean (2009)
    Inter Research
    In:  Marine Ecology Progress Series, 378 . pp. 1-11.
    Details
    Publication Date: 2021-08-13
    Description: The North Pacific Ocean population of the neon flying squid Ommastrephes bartramii, which undertakes seasonal north–south migrations, consists of autumn and winter–spring spawning cohorts. We examined life history differences between the 2 cohorts in relation to the oceanographic environment. The differences could be explained by seasonal north–south movements of the following 2 oceanographic zones: (1) the optimum spawning zone defined by sea surface temperatures; and (2) the food-rich zone defined by the position of the transition zone chlorophyll front (TZCF). The 2 cohorts use the food-rich zone in different phases of their life cycles. The spawning grounds for the autumn cohort occur within the subtropical frontal zone (STFZ), characterized by enhanced productivity in winter due to its proximity to the TZCF, whereas the spawning grounds for the winter–spring cohort occur within the subtropical domain, which is less productive. As the TZCF shifts northward in spring, the autumn cohort continues to occur in the productive area north of the TZCF, whereas the winter–spring cohort remains in the less productive area to the south until it migrates into productive waters north of the TZCF in the summer or autumn. Consequently, the autumn cohort grows faster than the winter–spring cohort during the first half of its life cycle, whereas the winter–spring cohort grows faster during the second half. This growth pattern may be responsible for differing migration patterns; males of the autumn cohort do not have to migrate given their early fast growth in the STFZ, whereas those of the winter–spring cohort must migrate to the food-rich subarctic frontal zone to compensate for their slow growth. These biological and ecological differences between the 2 cohorts suggest flexibility of their life history response to oceanographic environments.
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  • 30
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    Interior pathways of the North Atlantic meridional overturning circulation (2009)
    Nature Publishing Group
    In:  Nature, 459 . pp. 243-248.
    Details
    Publication Date: 2017-03-06
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  • 31
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    Rapid sea-level rise and reef back-stepping at the close of the last interglacial highstand (2009)
    Nature Publishing Group
    In:  Nature, 458 (7240). pp. 881-884.
    Details
    Publication Date: 2017-03-06
    Description: Widespread evidence of a +4–6-m sea-level highstand during the last interglacial period (Marine Isotope Stage 5e) has led to warnings that modern ice sheets will deteriorate owing to global warming and initiate a rise of similar magnitude by ad 2100 (ref. 1). The rate of this projected rise is based on ice-sheet melting simulations and downplays discoveries of more rapid ice loss2, 3. Knowing the rate at which sea level reached its highstand during the last interglacial period is fundamental in assessing if such rapid ice-loss processes could lead to future catastrophic sea-level rise. The best direct record of sea level during this highstand comes from well-dated fossil reefs in stable areas4, 5, 6. However, this record lacks both reef-crest development up to the full highstand elevation, as inferred7 from widespread intertidal indicators at +6 m, and a detailed chronology, owing to the difficulty of replicating U-series ages on submillennial timescales8. Here we present a complete reef-crest sequence for the last interglacial highstand and its U-series chronology from the stable northeast Yucatán peninsula, Mexico. We find that reef development during the highstand was punctuated by reef-crest demise at +3 m and back-stepping to +6 m. The abrupt demise of the lower-reef crest, but continuous accretion between the lower-lagoonal unit and the upper-reef crest, allows us to infer that this back-stepping occurred on an ecological timescale and was triggered by a 2–3-m jump in sea level. Using strictly reliable 230Th ages of corals from the upper-reef crest, and improved stratigraphic screening of coral ages from other stable sites, we constrain this jump to have occurred approx121 kyr ago and conclude that it supports an episode of ice-sheet instability during the terminal phase of the last interglacial period.
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  • 32
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    Hydroacoustic resolution of small-scale vertical distribution in Baltic cod Gadus morhua - habitat choice and limits during spawning (2009)
    Inter Research
    In:  Marine Ecology Progress Series, 377 . pp. 239-253.
    Details
    Publication Date: 2018-06-01
    Description: Highly stratified marine ecosystems with dynamic features such as fronts or clines in salinity, temperature, or oxygen concentration challenge an individual’s ability to select suitable living conditions. Ultimately, environmental heterogeneity organizes the spatial distributions of populations and hence the spatial structure of the ecosystem. Our aim here is to present a method to resolve small-scale distribution on an individual level, as needed for the behaviorally-based prediction of habitat choice and limits. We focused on the small-scale vertical distribution of cod Gadus morhua L. in the Bornholm Basin, central Baltic Sea, during spawning time in 2 years with different vertical thermohaline and oxygen stratifications. Individual cod were identified by echotracking of real-time in situ hydroacoustic distribution data. In order to resolve and identify hydrographic preferences and limits, ambient parameters including temperature, salinity, and oxygen concentration as well as expected egg-survival probability were individually allocated to each fish. The vertical distribution of hydroacoustically identified fish was compared to data simultaneously recorded by data storage tags attached to cod. The results showed a clear influence of ambient salinity and oxygen concentration on the distribution pattern and distributional limitation of cod during spawning time, and also consistency of data storage tag-derived distribution patterns with those based on individual echotracking. We therefore consider this method to be a useful tool to analyze individual behavior and its implications for the population’s spatial distribution in stratified environments.
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  • 33
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    Optimal uptake kinetics: physiological acclimation explains the pattern of nitrate uptake by phytoplankton in the ocean (2009)
    Inter Research
    In:  Marine Ecology Progress Series, 384 . pp. 1-12.
    Details
    Publication Date: 2018-06-01
    Description: Phytoplankton supply the base of the marine food web and drive the biogeochemical cycles of carbon and nutrients. Over much of the ocean, their growth is limited by their uptake of nitrogen (as nitrate), which has most commonly been described by the hyperbolic Michaelis-Menten (MM) equation. However, the lack of a theory to explain variations in MM constants has hindered our ability to predict the response of marine ecosystems to changes in environmental conditions. The MM equation fits data from short-term experiments well, but does not agree with steady-state experiments over wide ranges of nutrient concentrations. In contrast, the recently developed optimal uptake kinetics (OU) does agree with the latter and can also describe the observed pattern of MM half-saturation constants from field. experiments. OU kinetics explains the observed pattern of N uptake as the result of a general physiological trade-off between nutrient uptake capacity and affinity. The existence of a general trade-off would imply a relatively high degree of predictability in the response of nutrient uptake to changing nutrient concentrations and thus provide a basis for predicting effects of climate change on marine ecosystems and biogeochemical cycles.
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  • 34
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    Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita (2008)
    Nature Publishing Group
    Details
    Publication Date: 2022-05-26
    Description: © 2008 Nature Publishing Group. This article is distributed under the terms of the Creative Commons Attribution-Noncommercial-Share Alike license. The definitive version was published in Nature Biotechnology 26 (2008): 909-915, doi:10.1038/nbt.1482.
    Description: Plant-parasitic nematodes are major agricultural pests worldwide and novel approaches to control them are sorely needed. We report the draft genome sequence of the root-knot nematode Meloidogyne incognita, a biotrophic parasite of many crops, including tomato, cotton and coffee. Most of the assembled sequence of this asexually reproducing nematode, totaling 86 Mb, exists in pairs of homologous but divergent segments. This suggests that ancient allelic regions in M. incognita are evolving toward effective haploidy, permitting new mechanisms of adaptation. The number and diversity of plant cell wall–degrading enzymes in M. incognita is unprecedented in any animal for which a genome sequence is available, and may derive from multiple horizontal gene transfers from bacterial sources. Our results provide insights into the adaptations required by metazoans to successfully parasitize immunocompetent plants, and open the way for discovering new antiparasitic strategies.
    Description: SCRI laboratory (V.C.B. and J.T.J.) received funding from the Scottish Government. This work benefited from links funded via COST Action 872. G.V.M. and V.L. are supported by ARC, CNRS, EMBO, MENRT and Region Rhone-Alpes. G.V.M., M.R.-R. and V.L. are also funded by the EU Cascade Network of Excellence and the integrated project Crescendo. M.-C.C. is supported by MENRT.
    Repository Name: Woods Hole Open Access Server
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  • 35
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    Significant contribution of the 18.6 year tidal cycle to regional coastal changes (2008)
    Nature Publishing Group
    In:  Nature Geoscience, 1 (3). pp. 169-172.
    Details
    Publication Date: 2017-03-13
    Description: Although rising global sea levels will affect the shape of coastlines over the coming decades1, 2, the most severe and catastrophic shoreline changes occur as a consequence of local and regional-scale processes. Changes in sediment supply3 and deltaic subsidence4, 5, both natural or anthropogenic, and the occurrences of tropical cyclones4, 5 and tsunamis6 have been shown to be the leading controls on coastal erosion. Here, we use satellite images of South American mangrove-colonized mud banks collected over the past twenty years to reconstruct changes in the extent of the shoreline between the Amazon and Orinoco rivers. The observed timing of the redistribution of sediment and migration of the mud banks along the 1,500 km muddy coast suggests the dominant control of ocean forcing by the 18.6 year nodal tidal cycle7. Other factors affecting sea level such as global warming or El Niño and La Niña events show only secondary influences on the recorded changes. In the coming decade, the 18.6 year cycle will result in an increase of mean high water levels of 6 cm along the coast of French Guiana, which will lead to a 90 m shoreline retreat.
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  • 36
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    Organic matter release by cold water corals and its implication for fauna–microbe interaction (2008)
    Inter Research
    In:  Marine Ecology Progress Series, 372 . pp. 67-75.
    Details
    Publication Date: 2017-06-27
    Description: Particulate (POM) and dissolved organic matter (DOM) released by the cold water corals Lophelia pertusa (L.) and Madrepora oculata (L.) was collected, analysed and quantitatively compared to that released by warm water reef-building corals. Particulate nitrogen (PN) and particulate organic carbon (POC) release rates of L. pertusa were 0.14 ± 0.07 mg N m–2 h–1 and 1.43 ± 1.22 mg C m–2 h–1, respectively, which is in the lower range of POM release rates measured for warm water corals, while dissolved organic carbon (DOC) release was 47 ± 19 mg C m–2 h–1. The resulting high DOC:POC ratio indicates that most cold water coral-derived organic matter immediately dissolved in the water column. Cold water corals, similar to their warm water counterparts, produced large amounts of nitrogen-rich coral mucus with C:N ratios of 5 to 7 for Lophelia- and 7 to 9 for Madrepora-derived mucus. A 7-fold increase in the oxygen consumption rates in cold water coral mucus-amended seawater containing the natural microbial assemblage indicates that this organic matter provided an attractive food source for pelagic microbes. In situ investigations at Røst Reef, Norway, showed that microbial activity in the seawater closest to the reef was 10 times higher than in the overlying water column. This suggests that cold water corals can stimulate microbial activity in the direct reef vicinity by the release of easily degradable and nutrient-rich organic matter, which may thereby function as a vector for carbon and nutrient cycling via the microbial loop in cold water coral reef systems.
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  • 37
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    Biosynthetic capacities of actinomycetes. 46. Genoketides A1 and A2, new octaketides and biosynthetic intermediates of chrysophanol produced by Streptomyces sp. AK 671 (2008)
    Nature Publishing Group
    In:  Journal of Antibiotics, 61 . pp. 464-473.
    Details
    Publication Date: 2017-06-09
    Description: The new aromatic polyketides genoketide A1, genoketide A2 and prechrysophanol glucuronide are biosynthetic intermediates of the octaketide chrysophanol. They were isolated from the alkaliphilic strain Streptomyces sp. AK 671 together with the new metabolite chrysophanol glucuronide. The structures of the compounds were elucidated by mass spectrometry and NMR methods. Genoketide A2 exhibited a slight and prechrysophanol glucuronide a more pronounced inhibition of the proliferation of L5178y lymphoma cells.
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  • 38
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    Agulhas leakage dynamics affects decadal variability in Atlantic overturning circulation (2008)
    Nature Publishing Group
    In:  Nature, 456 . pp. 489-492.
    Details
    Publication Date: 2019-09-23
    Description: Predicting the evolution of climate over decadal timescales requires a quantitative understanding of the dynamics that govern the meridional overturning circulation (MOC)1. Comprehensive ocean measurement programmes aiming to monitor MOC variations have been established in the subtropical North Atlantic2, 3 (RAPID, at latitude 26.5° N, and MOVE, at latitude 16° N) and show strong variability on intraseasonal to interannual timescales. Observational evidence of longer-term changes in MOC transport remains scarce, owing to infrequent sampling of transoceanic sections over past decades4, 5. Inferences based on long-term sea surface temperature records, however, supported by model simulations, suggest a variability with an amplitude of plusminus1.5–3 Sv (1 Sv = 106 m3 s-1) on decadal timescales in the subtropics6. Such variability has been attributed to variations of deep water formation in the sub-arctic Atlantic, particularly the renewal rate of Labrador Sea Water7. Here we present results from a model simulation that suggest an additional influence on decadal MOC variability having a Southern Hemisphere origin: dynamic signals originating in the Agulhas leakage region at the southern tip of Africa. These contribute a MOC signal in the tropical and subtropical North Atlantic that is of the same order of magnitude as the northern source. A complete rationalization of observed MOC changes therefore also requires consideration of signals arriving from the south.
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  • 39
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    Mesozoic climate - Liverworts and all (2008)
    Nature Publishing Group
    In:  Nature Geoscience, 1 (1). pp. 14-15.
    Details
    Publication Date: 2017-02-22
    Description: The relationship between carbon dioxide and climate over millions of years has been a source of controversy. Fossilized liverwort leaves can help illuminate both temperature and atmospheric carbon dioxide levels from 200 to 60 million years ago.
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  • 40
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    Phosphorus cycling in the North and South Atlantic Ocean subtropical gyres (2008)
    Nature Publishing Group
    In:  Nature Geoscience, 1 (7). pp. 439-443.
    Details
    Publication Date: 2017-02-23
    Description: Despite similar physical properties, the Northern and Southern Atlantic subtropical gyres have different biogeochemical regimes. The Northern subtropical gyre, which is subject to iron deposition from Saharan dust1, is depleted in the nutrient phosphate, possibly as a result of iron-enhanced nitrogen fixation2. Although phosphate depleted, rates of carbon fixation in the euphotic zone of the North Atlantic subtropical gyre are comparable to those of the South Atlantic subtropical gyre3, which is not phosphate limited. Here we use the activity of the phosphorus-specific enzyme alkaline phosphatase to show potentially enhanced utilization of dissolved organic phosphorus occurring over much of the North Atlantic subtropical gyre. We find that during the boreal spring up to 30% of primary production in the North Atlantic gyre is supported by dissolved organic phosphorus. Our diagnostics and composite map of the surface distribution of dissolved organic phosphorus in the subtropical Atlantic Ocean reveal shorter residence times in the North Atlantic gyre than the South Atlantic gyre. We interpret the asymmetry of dissolved organic phosphorus cycling in the two gyres as a consequence of enhanced nitrogen fixation in the North Atlantic Ocean4, which forces the system towards phosphorus limitation. We suggest that dissolved organic phosphorus utilization may contribute to primary production in other phosphorus-limited ocean settings as well.
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  • 41
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    The invasive red alga Gracilaria vermiculophylla in the Baltic Sea: adaptation to brackish water may compensate for light limitation (2008)
    Inter Research
    In:  Aquatic Biology, 3 (3). pp. 251-264.
    Details
    Publication Date: 2016-09-06
    Description: The recent introduction of Gracilaria vermiculophylla (Rhodophyta) to the Kiel Fjord area was a reason for concern, since this red macroalga performs best under mesohaline conditions and thus appears well adapted to thrive and spread in the Baltic Sea environment, A systematic survey on a coastal range of 500 km in 2006 and 2007 indicated considerable Multiplication and spreading of G. vermiculophylla within Kiel Fjord, but provided little evidence of long-distance transport. Nonetheless, flow-through growth experiments conducted at a range of salinities under ambient light showed that G. vermiculophylla should be able to grow in most of the Baltic Sea. Growth declined only below a salinity of 5.5. High water temperatures in summer seem to reduce resistance against low salinity. Growth of G, vermiculophylla in the SW Baltic is limited by light and is only possible during summer and above a depth of 3 m. Drifting fragments are dispersed by currents. Either they sink to deeper waters, where they degrade, or they accumulate in shallow and sheltered waters, where they form perennial mats. These overgrow not only soft bottom sediments, but also stones, which are an important habitat to Fucus vesiculosus, the main native perennial alga in the Baltic Sea. As compared to F. vesiculosus, G. vermiculophylla seems to represent a preferred refuge for mesograzers and other invertebrates, particularly in winter. Nonetheless, feeding trials showed that potential grazers avoided G. vermiculophylla relative to F vesiculosus. Daily biomass uptake by grazers associated with G. vermiculophylla in nature did not exceed 2 g kg(-1) and is 〈11% of average daily net growth (18.5 g kg(-1)) in the first 2 m below sea level. Consequently, feeding may not be sufficient to control the spread of G. vermiculophylla in the SW Baltic. Our study suggests that absence of feeding enemies and adaptation to brackish water may allow G. vermiculophylla to invade most shallow coastal waters of the inner Baltic Sea despite light limitation.
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  • 42
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    Growth and calcification in the cephalopod Sepia officinalis under elevated seawater pCO(2) (2008)
    Inter Research
    In:  Marine Ecology Progress Series, 373 . pp. 303-309.
    Details
    Publication Date: 2019-09-23
    Description: Ocean acidification and associated changes in seawater carbonate chemistry negatively influence calcification processes and depress metabolism in many calcifying marine invertebrates. We present data on the cephalopod mollusc Sepia officinalis, an invertebrate that is capable of not only maintaining calcification, but also growth rates and metabolism when exposed to elevated partial pressures of carbon dioxide (pCO(2)). During a 6 wk period, juvenile S. officinalis maintained calcification under similar to 4000 and similar to 6000 ppm CO2, and grew at the same rate with the same gross growth efficiency as did control animals. They gained approximately 4%, body mass daily and increased the mass of their calcified cuttlebone by over 500 %. We conclude that active cephalopods possess a certain level of pre-adaptation to long-term increments in carbon dioxide levels. Our general understanding of the mechanistic processes that limit calcification must improve before we can begin to predict what effects future ocean acidification will have on calcifying marine invertebrates.
    Type: Article , PeerReviewed , info:eu-repo/semantics/article
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  • 43
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    Importance of genetic diversity in eelgrass Zostera marina for its resilience to global warming (2008)
    Inter Research
    In:  Marine Ecology Progress Series, 355 . pp. 1-7.
    Details
    Publication Date: 2019-09-23
    Description: Effects of global warming on marine ecosystems are far less understood than they are in terrestrial environments. Macrophyte-based coastal ecosystems are particularly vulnerable to global warming, because they often lack species redundancy. We tested whether summer heat waves have negative effects on an ecologically important ecosystem engineer, the eelgrass Zostera marina L., and whether high genotypic diversity may provide resilience in the face of climatic extremes. In a mesocosm experiment, we manipulated genotypic diversity of eelgrass patches fully crossed with water temperature (control vs. temperature stress) over 5 mo. We found a strong negative effect of warming and a positive effect of genotypic diversity on shoot densities of eelgrass. These results suggest that eelgrass meadows and associated ecosystem services will be negatively affected by predicted increases in summer temperature extremes. Genotypic diversity may provide critical response diversity for maintaining seagrass ecosystem functioning, and for adaptation to environmental change.
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    Arc-parallel flow in the mantle wedge beneath Costa Rica and Nicaragua (2008)
    Nature Publishing Group
    In:  Nature, 451 (7182). pp. 1094-1097.
    Details
    Publication Date: 2020-10-26
    Description: Resolving flow geometry in the mantle wedge is central to understanding the thermal and chemical structure of subduction zones, subducting plate dehydration, and melting that leads to arc volcanism, which can threaten large populations and alter climate through gas and particle emission. Here we show that isotope geochemistry and seismic velocity anisotropy provide strong evidence for trench-parallel flow in the mantle wedge beneath Costa Rica and Nicaragua. This finding contradicts classical models, which predict trench-normal flow owing to the overlying wedge mantle being dragged downwards by the subducting plate. The isotopic signature of central Costa Rican volcanic rocks is not consistent with its derivation from the mantle wedge1, 2, 3 or eroded fore-arc complexes4 but instead from seamounts of the Galapagos hotspot track on the subducting Cocos plate. This isotopic signature decreases continuously from central Costa Rica to northwestern Nicaragua. As the age of the isotopic signature beneath Costa Rica can be constrained and its transport distance is known, minimum northwestward flow rates can be estimated (63–190 mm yr-1) and are comparable to the magnitude of subducting Cocos plate motion (approx85 mm yr-1). Trench-parallel flow needs to be taken into account in models evaluating thermal and chemical structure and melt generation in subduction zones.
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  • 45
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    Advancing Decadal-Scale Climate Prediction in the North Atlantic Sector (2008)
    Nature Publishing Group
    In:  Nature, 453 . pp. 84-88.
    Details
    Publication Date: 2020-02-18
    Description: The climate of the North Atlantic region exhibits fluctuations on decadal timescales that have large societal consequences. Prominent examples include hurricane activity in the Atlantic1, and surface-temperature and rainfall variations over North America2, Europe3 and northern Africa4. Although these multidecadal variations are potentially predictable if the current state of the ocean is known5, 6, 7, the lack of subsurface ocean observations8 that constrain this state has been a limiting factor for realizing the full skill potential of such predictions9. Here we apply a simple approach—that uses only sea surface temperature (SST) observations—to partly overcome this difficulty and perform retrospective decadal predictions with a climate model. Skill is improved significantly relative to predictions made with incomplete knowledge of the ocean state10, particularly in the North Atlantic and tropical Pacific oceans. Thus these results point towards the possibility of routine decadal climate predictions. Using this method, and by considering both internal natural climate variations and projected future anthropogenic forcing, we make the following forecast: over the next decade, the current Atlantic meridional overturning circulation will weaken to its long-term mean; moreover, North Atlantic SST and European and North American surface temperatures will cool slightly, whereas tropical Pacific SST will remain almost unchanged. Our results suggest that global surface temperature may not increase over the next decade, as natural climate variations in the North Atlantic and tropical Pacific temporarily offset the projected anthropogenic warming.
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  • 46
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    Nitrogen fixation and growth rates of Trichodesmium IMS-101 as a function of light intensity (2008)
    Inter Research
    In:  Marine Ecology Progress Series, 359 . pp. 25-36.
    Details
    Publication Date: 2019-09-23
    Description: The diazotrophic cyanobacterium Trichodesmium is a significant contributor to marine nitrogen and carbon cycles and has been incorporated in biogeochemical ocean circulation models. To date, parameterization of light as a controlling factor for nitrogen fixation has been based on field observations, where factors other than light also affect Trichodesmium physiology. Here we present data on light-dependent (15 to 1100 µmol quanta m–2 s–1) diazotrophic growth from controlled laboratory experiments and their implications for modeling approaches. We supply a simple empirical model to describe nitrogen fixation by Trichodesmium in batch cultures. Diazotrophic growth of axenic Trichodesmium IMS-101 was light saturated at 180 µmol quanta m–2 s–1 and did not vary significantly at higher photon irradiances up to 1100 µmol quanta m–2 s–1 (μcarbon based ≈ 0.26 d–1). Chlorophyll a (chl a) normalized N2 fixation rates were significantly affected by light intensity during mid-exponential growth (0.74 to 4.45 mol N fixed mol chl a–1 h–1) over the range of photon irradiances tested. In contrast, nitrogen fixation rates normalized to the cellular carbon content were relatively unaffected by light intensity (0.42 to 0.59, averaging 0.5 mmol N mol particulate organic carbon [POC]–1 h–1). Trichodesmium carbon biomass can be used to estimate the nitrogen input by this diazotroph into the ocean; the maximum input rate is 350 nmol N fixed l–1 h–1.
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  • 47
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    Saline water sinking (2008)
    Nature Publishing Group
    In:  Nature Geoscience, 1 (7). pp. 423-424.
    Details
    Publication Date: 2017-02-23
    Description: Ninety-five million years ago, ocean bottom waters were much warmer than at present. Some of this warmth could have come from the proto-North Atlantic's continental shelves after the balmy surface waters became increasingly salty through evaporation.
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  • 48
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    Carbon sources and trophic structure in an eelgrass (Zostera marina L.) bed based on stable isotope and fatty acid analyses (2008)
    Inter Research
    In:  Marine Ecology Progress Series, 358 . pp. 103-114.
    Details
    Publication Date: 2018-06-01
    Description: Multiple stable isotope and fatty acid analyses were applied to examine food web dynamics in an eelgrass Zostera marina L. system in the western Baltic Sea. Samples of eelgrass, epiphytic algae, sand microflora, red algae, phytoplankton and main consumer species were collected in June 2002. delta C-13 values of primary producers ranged from -9.6%. for eelgrass to the most depleted value of -34.9%. for the most abundant red alga, Delesseria sanguinea, Epiphyte delta C-13 (-11.3 parts per thousand.) was close to the value for eelgrass, whereas sand microflora and phytoplankton showed intermediate values (-20.0 and -22.6 parts per thousand, respectively). delta C-13 values of consumer species varied from - 12.2 parts per thousand in the gastropod Lacuna vincta to -23.9 parts per thousand in the amphipod Amphitoe rubricata. Epiphytes, sand microflora and phytoplankton had relatively similar fatty acid signatures, indicating a dominance of diatoms. Fatty acid composition of the main consumers included the biomarker fatty acids for diatoms and red algae, whereas those for eelgrass were negligible. The stable isotope data in combination with the results of the fatty acid analysis strongly indicated that the food web in this eelgrass community was based on epiphytes, sand microflora and red algae. Additionally, the continuous distribution of delta N-15 values implied a food web that was characterized by a large proportion of generalist feeders in every group of consumers and by a high degree of omnivory.
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  • 49
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    Influence of brine formation on Arctic Ocean circulation over the past 15 million years (2008)
    Nature Publishing Group
    In:  Nature Geoscience, 1 . pp. 68-72.
    Details
    Publication Date: 2019-09-23
    Description: The early oceanographic history of the Arctic Ocean is important in regulating, and responding to, climatic changes. However, constraints on its oceanographic history preceding the Quaternary (the past 1.8 Myr) have become available only recently, because of the difficulties associated with obtaining continuous sediment records in such a hostile setting. Here, we use the neodymium isotope compositions of two sediment cores recovered near the North Pole to reconstruct over the past approx15 Myr the sources contributing to Arctic Intermediate Water, a water mass found today at depths of 200 to 1,500 m. We interpret high neodymium ratios for the period between 15 and 2 Myr ago, and for the glacial periods thereafter, as indicative of weathering input from the Siberian Putoranan basalts into the Arctic Ocean. Arctic Intermediate Water was then derived from brine formation in the Eurasian shelf regions, with only a limited contribution of intermediate water from the North Atlantic. In contrast, the modern circulation pattern, with relatively high contributions of North Atlantic Intermediate Water and negligible input from brine formation, exhibits low neodymium isotope ratios and is typical for the interglacial periods of the past 2 Myr. We suggest that changes in climatic conditions and the tectonic setting were responsible for switches between these two modes.
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  • 50
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    Synchronous basin-wide formation and redox-controlled preservation of a Mediterranean sapropel (2008)
    Nature Publishing Group
    In:  Nature Geoscience, 1 . pp. 606-610.
    Details
    Publication Date: 2017-02-22
    Description: Organic-rich sedimentary units called sapropels have formed repeatedly in the eastern Mediterranean Sea, in response to variations of solar radiation. Sapropel formation is due to a change either in the flux of organic matter to the sea floor from productivity changes or in preservation by bottom-water oxygen levels. However, the relative importance of surface-ocean productivity versus deep-water preservation for the formation of these organic-rich shale beds is still being debated, and conflicting interpretations are often invoked1, 2, 3, 4, 5, 6, 7. Here we analyse at high resolution the differences in the composition of the most recent sapropel, S1, in a suite of cores covering the entire eastern Mediterranean basin. We demonstrate that during the 4,000 years of sapropel formation, surface-water salinity was reduced and the deep eastern Mediterranean Sea, below 1,800 m depth, was devoid of oxygen. This resulted in the preferential basin-wide preservation of sapropel S1 with different characteristics above and below 1,800 m depth as a result of different redox conditions. We conclude that climate-induced stratification of the ocean may therefore contribute to enhanced preservation of organic matter in sapropels and potentially also in black shales.
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    Cold-water coral growth in relation to the hydrography of the Celtic and Nordic European continental margin (2008)
    Inter Research
    In:  Marine Ecology Progress Series, 371 . pp. 165-176.
    Details
    Publication Date: 2018-06-01
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    The Phaeodactylum genome reveals the evolutionary history of diatom genomes (2008)
    Nature Publishing Group
    In:  Nature, 456 . pp. 239-244.
    Details
    Publication Date: 2017-03-06
    Description: Diatoms are photosynthetic secondary endosymbionts found throughout marine and freshwater environments, and are believed to be responsible for around one-fifth of the primary productivity on Earth1, 2. The genome sequence of the marine centric diatom Thalassiosira pseudonana was recently reported, revealing a wealth of information about diatom biology3, 4, 5. Here we report the complete genome sequence of the pennate diatom Phaeodactylum tricornutum and compare it with that of T. pseudonana to clarify evolutionary origins, functional significance and ubiquity of these features throughout diatoms. In spite of the fact that the pennate and centric lineages have only been diverging for 90 million years, their genome structures are dramatically different and a substantial fraction of genes (approx40%) are not shared by these representatives of the two lineages. Analysis of molecular divergence compared with yeasts and metazoans reveals rapid rates of gene diversification in diatoms. Contributing factors include selective gene family expansions, differential losses and gains of genes and introns, and differential mobilization of transposable elements. Most significantly, we document the presence of hundreds of genes from bacteria. More than 300 of these gene transfers are found in both diatoms, attesting to their ancient origins, and many are likely to provide novel possibilities for metabolite management and for perception of environmental signals. These findings go a long way towards explaining the incredible diversity and success of the diatoms in contemporary oceans.
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    Multi-species larval fish growth model based on temperature and fluorometrically derived RNA/DNA ratios: results from a meta-analysis (2008)
    Inter Research
    In:  Marine Ecology Progress Series, 371 . pp. 221-232.
    Details
    Publication Date: 2018-06-01
    Description: Weight-specific growth rate (G) and growth performance (the fraction of maximum growth realized, G pf) are key demographic characteristics. The ratio of RNA/DNA (RD) can provide information on both G and G pf. Estimating G from RD in larval fish requires an adjustment for the activity of RNA at different temperatures. Based on a meta-analysis of published data, we present a general model for the relationship between G in marine fish larvae and fluorometrically derived RD and temperature (T), and suggest that this model can be used to estimate G in marine fish larvae. Several options for estimating G pf are also considered, including the use of a reference growth rate (Gref). RDs of well-fed larvae appeared to be independent of water temperatures between 4 and 28°C, suggesting that any increase in growth rate with temperature was accomplished by increased activity rather than increased concentrations of RNA. However, for the best-fit meta-analysis RD–T–G model, the relationship between RD and G pf was temperature dependent for fish less than fully fed.
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    The response of the Antarctic Circumpolar Current to recent climate change (2008)
    Nature Publishing Group
    In:  Nature Geoscience, 1 . pp. 864-869.
    Details
    Publication Date: 2017-02-22
    Description: Observations show a significant intensification of the Southern Hemisphere westerlies, the prevailing winds between the latitudes of 30° and 60° S, over the past decades. A continuation of this intensification trend is projected by climate scenarios for the twenty-first century. The response of the Antarctic Circumpolar Current and the carbon sink in the Southern Ocean to changes in wind stress and surface buoyancy fluxes is under debate. Here we analyse the Argo network of profiling floats and historical oceanographic data to detect coherent hemispheric-scale warming and freshening trends that extend to depths of more than 1,000 m. The warming and freshening is partly related to changes in the properties of the water masses that make up the Antarctic Circumpolar Current, which are consistent with the anthropogenic changes in heat and freshwater fluxes suggested by climate models. However, we detect no increase in the tilt of the surfaces of equal density across the Antarctic Circumpolar Current, in contrast to coarse-resolution model studies. Our results imply that the transport in the Antarctic Circumpolar Current and meridional overturning in the Southern Ocean are insensitive to decadal changes in wind stress.
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    Climate change: Acid test for marine biodiversity (2008)
    Nature Publishing Group
    In:  Nature, 454 . pp. 46-47.
    Details
    Publication Date: 2019-09-23
    Description: Rising levels of atmospheric carbon dioxide lead to acidification of the oceans. A site in the Mediterranean, naturally carbonated by under-sea volcanoes, provides clues to the possible effects on marine ecosystems.
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    Climate warming in winter affects the coupling between phytoplankton and bacteria during the spring bloom: a mesocosm study (2008)
    Inter Research
    In:  Aquatic Microbial Ecology, 51 . pp. 105-115.
    Details
    Publication Date: 2019-09-23
    Description: The response of the phytoplankton and bacterial spring succession to the predicted warming of sea surface temperature in temperate climate zones during winter was studied using an indoor-mesocosm approach. The mesocosms were filled with winter water from the Kiel Fjord, Baltic Sea. Two of them were started at ~2°C and the temperature was subsequently increased according to the decadal temperature profile of the fjord (ΔT 0°C, baseline treatment). The other mesocosms were run at 3 elevated temperatures with differences of ΔT +2, +4 and +6°C. All mesocosms were exposed to the same light conditions. Timing of peak phytoplankton primary production (PP) during the experimental spring bloom was not significantly influenced by increasing temperatures, whereas the peak of bacterial secondary production (BSP) was accelerated by about 2 d per °C. This suggests that, in case of warming, the spring peak of bacterial degradation of organic matter (in terms of BSP) would occur earlier in the year. Furthermore, the lag time between the peaks of PP and BSP (about 16 d for ΔT 0°C) would diminish progressively at elevated temperatures. The average ratio between BSP and PP increased significantly from 0.37 in the coldest mesocosms to 0.63 in the warmest ones. Community respiration and the contribution of picoplankton (〈3 µm fraction) to this also increased at elevated temperatures. Our results lead to the prediction that climate warming during the winter/ early spring in temperate climate zones will favor bacterial degradation of organic matter by tightening the coupling between phytoplankton and bacteria. However, if PP is reduced by warming, as in our experiments, this will not necessarily lead to increased recycling of organic matter (and CO2).
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    Recent Antarctic ice mass loss from radar interferometry and regional climate modelling (2008)
    Nature Publishing Group
    In:  Nature Geoscience, 1 (2). pp. 106-110.
    Details
    Publication Date: 2020-01-07
    Description: Large uncertainties remain in the current and future contribution to sea level rise from Antarctica. Climate warming may increase snowfall in the continent’s interior1,2,3, but enhance glacier discharge at the coast where warmer air and ocean temperatures erode the buttressing ice shelves4,5,6,7,8,9,10,11. Here, we use satellite interferometric synthetic-aperture radar observations from 1992 to 2006 covering 85% of Antarctica’s coastline to estimate the total mass flux into the ocean. We compare the mass fluxes from large drainage basin units with interior snow accumulation calculated from a regional atmospheric climate model for 1980 to 2004. In East Antarctica, small glacier losses in Wilkes Land and glacier gains at the mouths of the Filchner and Ross ice shelves combine to a near-zero loss of 4±61 Gt yr−1. In West Antarctica, widespread losses along the Bellingshausen and Amundsen seas increased the ice sheet loss by 59% in 10 years to reach 132±60 Gt yr−1 in 2006. In the Peninsula, losses increased by 140% to reach 60±46 Gt yr−1 in 2006. Losses are concentrated along narrow channels occupied by outlet glaciers and are caused by ongoing and past glacier acceleration. Changes in glacier flow therefore have a significant, if not dominant impact on ice sheet mass balance.
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    Growth and calcification in the cephalopod Sepia officinalis under elevated seawater pCO2 (2008)
    Inter Research
    In:  Marine Ecology Progress Series, 373 . pp. 303-309.
    Details
    Publication Date: 2019-09-24
    Description: Ocean acidification and associated changes in seawater carbonate chemistry negatively influence calcification processes and depress metabolism in many calcifying marine invertebrates. We present data on the cephalopod mollusc Sepia officinalis, an invertebrate that is capable of not only maintaining calcification, but also growth rates and metabolism when exposed to elevated partial pressures of carbon dioxide (pCO2). During a 6 wk period, juvenile S. officinalis maintained calcification under ~4000 and ~6000 ppm CO2, and grew at the same rate with the same gross growth efficiency as did control animals. They gained approximately 4% body mass daily and increased the mass of their calcified cuttlebone by over 500%. We conclude that active cephalopods possess a certain level of pre-adaptation to long-term increments in carbon dioxide levels. Our general understanding of the mechanistic processes that limit calcification must improve before we can begin to predict what effects future ocean acidification will have on calcifying marine invertebrates.
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    Habitat partitioning of denitrifying bacterial communities carrying nirS or nirK genes in the stratified water column of Lake Kinneret, Israel (2008)
    Inter Research
    In:  Aquatic Microbial Ecology, 51 . pp. 129-140.
    Details
    Publication Date: 2019-09-23
    Description: The community composition of denitrifying bacteria was studied in the stratified water column of Lake Kinneret. The nitrite reductase genes nirS and nirK were amplified by PCR from water samples taken at 1, 14, 19 and 22 m depth, which represent the epi-, meta- and hypolimnion of the lake. The PCR products were analyzed with terminal restriction fragment length polymorphism (T-RFLP) and clone libraries. The highest diversity of nirS denitrifying communities was observed at 1 m depth. According to the T-RFLP profiles and clone libraries of nirS products, 2 groups of denitrifiers were common to and dominant in all depths. Deduced protein sequences from one of these groups displayed low identity (77%) with other nirS sequences reported in GenBank. Denitrifying bacterial communities with nirK were most diverse at 22 m and showed highest similarity to those at 19 m depth. Sequences unrelated to nirK dominated the clone libraries from 1 m depth, suggesting that denitrifying bacteria with copper-containing nitrite reductase were less frequent at this depth. The results suggest that microorganisms with nirK and those with nirS respond differently to the environmental conditions in the stratified water column of Lake Kinneret.
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    From climate assessment to climate services (2008)
    Nature Publishing Group
    In:  Nature Geoscience, 1 . pp. 2-3.
    Details
    Publication Date: 2019-09-23
    Description: The Intergovernmental Panel for Climate Change has convinced the public that climate change is real. To tackle it, the panel needs complementary climate services that provide continuous climate information for all regions and the globe.
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    Persistent summer expansion of the Atlantic Warm Pool during glacial abrupt cold events (2008)
    Nature Publishing Group
    Details
    Publication Date: 2023-01-31
    Description: Palaeoclimate records and numerical model simulations indicate that changes in tropical and subtropical sea surface temperatures and in the annual average position of the intertropical convergence zone are linked to high-latitude climate changes on millennial to glacial–interglacial timescales. It has recently been suggested that cooling in the high latitudes associated with abrupt climate-change events is evident primarily during the northern hemisphere winter, implying increased seasonality at these times8. However, it is unclear whether such a seasonal bias also exists for the low latitudes. Here we analyse the Mg/Ca ratios of surface-dwelling foraminifera to reconstruct sea surface temperatures in the northeastern Gulf of Mexico for the past 300,000 years. We suggest that sea surface temperatures are controlled by the migration of the northern boundary of the Atlantic Warm Pool, and hence the position of the intertropical convergence zone during boreal summer, and are relatively insensitive to winter conditions. Our results suggest that summer Atlantic Warm Pool expansion is primarily affected by glacial–interglacial variability and low-latitude summer insolation. Because a clear signature of rapid climate-change events, such as the Younger Dryas cold event, is lacking in our record, we conclude that high-latitude events seem to influence only the winter Caribbean climate conditions, consistent with the hypothesis of extreme northern-hemisphere seasonality during abrupt cooling events.
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    Nature Medicine 2.0 (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 1-1 
    Details
    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] In the future, Nature Medicine will be famous to 15 ...
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    URL: http://dx.doi.org/10.1038/nm0107-1
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    Human T H 17 lymphocytes promote blood-brain barrier disruption and central nervous system inflammation (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 1173-1175 
    Details
    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] TH17 lymphocytes appear to be essential in the pathogenesis of numerous inflammatory diseases. We demonstrate here the expression of IL-17 and IL-22 receptors on blood-brain barrier endothelial cells (BBB-ECs) in multiple sclerosis lesions, and show that IL-17 and IL-22 disrupt BBB tight junctions ...
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    URL: http://dx.doi.org/10.1038/nm1651
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    In reply to 'Cardiotoxicity of the cancer therapeutic agent imatinib mesylate' (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 13-13 
    Details
    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] To the editor: The recent article by Kerkelä et al. reported clinical findings of congestive heart failure (CHF) in ten patients, and preclinical studies showing that imatinib-treated mice can develop left ventricular contractile dysfunction and cellular abnormalities suggestive of a toxic ...
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    URL: http://dx.doi.org/10.1038/nm0107-13a
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    In reply to 'Cardiotoxicity of the cancer therapeutic agent imatinib mesylate' (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 14-14 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] To the editor: We read with interest the article of Kerkelä et al. discussing the potential cardiotoxicity of imatinib mesylate in animal models and detailing ten patients, nine from our institution, who developed congestive heart failure (CHF) on imatinib therapy. This report has generated ...
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    URL: http://dx.doi.org/10.1038/nm0107-14
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    Is leptin an important physiological regulator of CRP? (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 17-18 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] To the Editor: Binding between C-reactive protein (CRP) and human leptin in vitro, and inhibition by CRP of the effects of human leptin in mice in vivo, have recently been reported by Chen et al.. In their in vitro studies the authors showed that after exposure of leptin-coupled agarose beads to ...
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    URL: http://dx.doi.org/10.1038/nm0107-17
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    The Young and the Restless (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 649-649 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] The issue of aging academics in times of budgetary constraints has stirred vigorous debate. Many older professors continue to be productive researchers and inspiring teachers with plenty of wind in their sails. However, some say the abundance of older professors is clogging an already narrow ...
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    URL: http://dx.doi.org/10.1038/nm0607-649
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    Emergency trials of blood substitutes skirt ethical questions (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 652-652 
    Details
    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] Did you wear a thick, blue plastic bracelet with the words “I decline the Northfield PolyHeme study” splashed across it in bold black writing during the years 2004 to 2006?... If not, and had you been in a serious accident during that time, you could have been unwittingly enrolled in a ...
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    Sluggish approvals blocking Africans' access to bed nets (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 651-651 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] In the fight against malaria, long-lasting insecticidal bed nets—made from polyester or plastic and treated with insecticides—are a favorite tool. Because they can be washed and reused for years, donors such as the Roll Back Malaria Partnership push for their use.... But the nets are ...
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    London hospital launches infectious disease 'biobank' (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 653-653 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] British doctors have begun collecting samples for Britain's first storehouse of infectious diseases, two years after the launch of the UK's ambitious BioBank project.... Following nearly a year of discussion over ethical approval, Guy’s & St Thomas’ hospital in London has a £45 million ...
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    Chromosome 5q deletion and epigenetic suppression of the gene encoding α-catenin ( CTNNA1 ) in myeloid cell transformation (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 78-83 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] Interstitial loss of all or part of the long arm of chromosome 5, or del(5q), is a frequent clonal chromosomal abnormality in human myelodysplastic syndrome (MDS, a preleukemic disorder) and acute myeloid leukemia (AML), and is thought to contribute to the pathogenesis of these diseases by deleting ...
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    Lactobacillus acidophilus modulates intestinal pain and induces opioid and cannabinoid receptors (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 35-37 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] Abdominal pain is common in the general population and, in patients with irritable bowel syndrome, is attributed to visceral hypersensitivity. We found that oral administration of specific Lactobacillus strains induced the expression of μ-opioid and cannabinoid receptors in intestinal epithelial ...
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    Biomarkers trump behavior in mental illness diagnosis (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 3-3 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] Here's how doctors decide which mental or neurological disorder their troubled patients suffer from: they ask questions like, “Are you hearing voices?” and “Do you feel like people are out to get you?”... Not all that different from how they used to do it about 100 years ...
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    A 'good death' for tumor immunology (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 28-30 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] Findings by Obeid et al. in this issue highlight a way to potentially enhance the ability of the immune system to kill tumor cells. The authors suggest that how cells die during chemotherapy is critical; one set of chemotherapeutic agents in particular, anthracyclins, seem to foster a favorable ...
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    Abrogation of nuclear receptors Nr4a3 andNr4a1 leads to development of acute myeloid leukemia (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 730-735 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] Nur77 (NR4A1) and Nor-1 (NR4A3) are highly homologous orphan nuclear receptors that regulate the transcription of overlapping target genes. The transcriptional activity of both proteins is regulated in a ligand-independent manner by cell- and stimulus-specific gene induction and protein ...
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    Neutralization of staphylococcal enterotoxin B by soluble, high-affinity receptor antagonists (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 725-729 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] Exotoxins of Staphylococcus aureus belong to a family of bacterial proteins that act as superantigens by activating a large subset of the T-cell population, causing massive release of inflammatory cytokines. This cascade can ultimately result in toxic shock syndrome and death. Therapeutics ...
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    T H 17 cells contribute to uveitis and scleritis and are expanded by IL-2 and inhibited by IL-27/STAT1 (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 711-718 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] T-helper type 17 cells (TH17) are implicated in rodent models of immune-mediated diseases. Here we report their involvement in human uveitis and scleritis, and validate our findings in experimental autoimmune uveoretinitis (EAU), a model of uveitis. TH17 cells were present in human peripheral blood ...
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    Retinaldehyde represses adipogenesis and diet-induced obesity (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 695-702 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] The metabolism of vitamin A and the diverse effects of its metabolites are tightly controlled by distinct retinoid-generating enzymes, retinoid-binding proteins and retinoid-activated nuclear receptors. Retinoic acid regulates differentiation and metabolism by activating the retinoic acid receptor ...
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    Dramatic rescue relieves rare case of smallpox infection (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 517-517 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] Soldier's son, wife develop rare case of eczema ...
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    News feature: Bugs vs Drugs (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 522-523 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] In the ongoing battle between bacteria and antibiotics, strains of Staphylococcus aureus are emerging the winners, reports Douglas ...
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    Straight talk from... Jim Young (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 524-524 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] How good is the new prostate cancer ...
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    News in brief (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 520-521 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] 19 Mar A group of nine prominent American scientific institutions call for an increase in funding for the US National Institutes of Health, warning that stagnant budgets outpaced by inflation threaten the progress of biomedical research.... 19 Mar Mosquitoes modified to carry a gene that ...
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    The Tax protein of HTLV-1 promotes oncogenesis in not only immature T cells but also mature T cells (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 527-528 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] To the editor: Adult T-cell leukemia/lymphoma (ATLL) is a fatal T-cell neoplasm caused by infection with human T-cell leukemia virus type I (HTLV-I). Hasegawa et al. have described transgenic mice that express HTLV-I Tax viral regulatory protein/oncoprotein in thymocytes. These mice developed ...
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    Autism: highly heritable but not inherited (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 534-536 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] Until recently, only 5–10% of autism cases were traceable to an underlying genetic cause. Two studies now change this. Jacquemont et al. and Sebat et al. suggest that this number is actually 10–20%, and it may grow to 30–40% with further research. The advance is based primarily on ...
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    A new way to regulate the NMJ (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 538-539 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] This year marks the twentieth anniversary of the discovery of the dystrophin gene, which is mutated in the devastating X-linked recessive muscle disease Duchenne muscular dystrophy (DMD). During DMD, heart and skeletal muscles break down, so that the affected boys are typically wheelchair-bound by ...
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    The bridge between dendritic cells and asthma (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 536-538 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] The key immunological regulator osteopontin was first identified as a structural protein in bone that formed a bridge (Latin pons) between the bone's mineral matrix and the bone cells inside it. Later, expression of osteopontin by activated T cells and dendritic cells was found to be an essential ...
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    Eat your heart out (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 539-541 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] Heart failure is a common and lethal condition, yet why the heart muscle fails remains a mystery. Alterations in myocardial metabolism, defects in calcium handling, alterations in myosin isoforms, cytoskeletal abnormalities and excessive cardiac myocyte apoptosis have all been implicated as causal ...
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    MicroRNAs loom large in the heart (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 541-541 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] How microRNAs (miRNAs) influence heart development and disease is a topic of growing interest. miRNAs regulate gene expression post-transcriptionally, typically by binding to mRNAs and inhibiting their translation. Three recent papers show that miRNAs are essential for heart development and ...
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    Research highlights (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 542-542 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] Gender matters How infertility-causing mutations are inherited is a tough puzzle. A dominant mutation with sex-specific phenotypes provides a clue (PLoS, doi:10.1371/journal.pbio.0050105). In screening mice for infertility, Laura Bannister et al. isolated a male sterile allele of ...
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    Derivation of engraftable skeletal myoblasts from human embryonic stem cells (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 642-648 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] Human embryonic stem cells (hESCs) are a promising source for cell therapy in degenerative diseases. A key step in establishing the medical potential of hESCs is the development of techniques for the conversion of hESCs into tissue-restricted precursors suitable for transplantation. We recently ...
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    Cyclic AMP–regulated exocytosis of Escherichia coli from infected bladder epithelial cells (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 625-630 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] The superficial bladder epithelium is a powerful barrier to urine and also serves as a regulator of bladder volume, which is achieved by apical exocytosis of specialized fusiform vesicles during distension of the bladder. We report that type 1 fimbriated uropathogenic Escherichia coli (UPEC) ...
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    SIK1 is a class II HDAC kinase that promotes survival of skeletal myocytes (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 597-603 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] During physical exercise, increases in motor neuron activity stimulate the expression of muscle-specific genes through the myocyte enhancer factor 2 (MEF2) family of transcription factors. Elevations in intracellular calcium increase MEF2 activity via the phosphorylation-dependent inactivation of ...
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    Controversy over cervical cancer vaccine spurs safety surveillance (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 392-393 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] When Gardasil, the first vaccine against human papilloma virus (HPV), was approved in June 2006 by the US Food and Drug Administration, it was widely hailed as a godsend for women.... Clinical trials involving more than 20,000 women showed the vaccine to be safe and effective. But the vaccine's ...
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    Aggressive drug marketing tactics trigger backlash (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 393-393 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] The average doctor's office these days looks much like a pharmaceutical sales convention: patients wipe their noses with Lipitor tissues and sign forms with Boniva pens attached to Lunesta clipboards. The ubiquity of these drug ads—and the sales representatives that place them—is ...
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    Bone marrow–specific Cap gene deletion protects against high-fat diet–induced insulin resistance (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 455-462 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] Cbl-associated protein (Cap) is a member of a phosphatidylinositol 3-kinase–independent pathway for insulin-stimulated translocation of the glucose transporter GLUT4. Despite this positive role of Cap in glucose uptake, here we show that deletion of the gene encoding Cap (official gene name: ...
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    Angiogenic inhibition reduces germinal matrix hemorrhage (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 477-485 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] The germinal matrix of premature infants is selectively vulnerable to hemorrhage within the first 48 h of life. To assess the role of vascular immaturity in germinal matrix hemorrhage (GMH), we evaluated germinal matrix angiogenesis in human fetuses and premature infants, as well as in premature ...
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    News in brief (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 234-235 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] 22 Jan Hoping to raise flagging employee morale, the US Centers for Disease Control and Prevention will hire a full-time ombudsman, agency director Julie Gerberding announces. 24 Jan The first draft of the human 'metabolome' describes more than 2,500 metabolites found in the body, of which fewer ...
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    Plagues and people meet the microbe hunters (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 239-239 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] In the history many of us are taught, the fates of societies are determined almost exclusively by the acts of humans, and then primarily humans bearing at least one Y chromosome. In The Power of Plagues, Irwin Sherman challenges this perspective. In the tradition of the Hans Zinsser's 1935 Rats, ...
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    Langerhans cells lap up HIV-1 (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 245-246 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] Paul Langerhans, a German medical student, was 21 when he described in 1868 a new epidermal cell type which now bears his name. The cells have long dendrites, so Langerhans regarded them as a component of the nervous system. A century later, Inga Silberberg discovered that these cells instead have ...
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    Cracking the cytokine code in psoriasis (2007)
    [s.l.] : Nature Publishing Group
    Nature medicine 13 (2007), S. 242-244 
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    ISSN: 1546-170X
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Medicine
    Notes: [Auszug] Recent research has led to a shift in thinking about the pathology of Crohn disease, in which chronic inflammation damages the gastrointestinal track. This paradigm shift highlights a key role for the interleukin (IL)-23 cytokine, rather than the previous emphasis on IL-12, as the driving force ...
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