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  • Other Sources  (1,749)
  • Elsevier  (1,575)
  • Nature Publishing Group  (172)
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  • 2010-2014  (1,051)
  • 2005-2009  (698)
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  • 1
    Publication Date: 2021-03-29
    Description: According to a model by Cerling (1991, 1999), the carbon isotope composition of calcretes should depend on the soil type and the CO2-concentration in the atmosphere. We have tested Cerling’s model by investigating 14 Palaeozoic sections with soil profiles. A large number of carbonate types of different genetic origin exist in the localities examined. Comparing the Palaeozoic samples with recent and subrecent calcretes, it can be demonstrated that anhedral, cryptocrystalline (〈10 μm) and subhedral microcrystalline (10 - 40 μm) carbonates are clearly of pedogenic origin. Crystals of larger size with a poikilotopic texture are of groundwater or burial diagenetic origin. Macro- and micromorphological features, typical of recent calcretes, occur in several soil profiles, but thin section microscopy reveals a strong diagenetic overprint of most pedogenic carbonates. Time equivalent sections with comparable soil types (protosols, calcisols and vertisols) show large variations in carbon isotope composition. On the other hand, different carbonate generations at one site do not differ much. Therefore Palaeozoic calcretes appear to be unsuitable for a deduction of the Palaeozoic CO2-concentration.
    Description: German Research Foundation (DFG)
    Description: research
    Keywords: 551.9 ; 552.5 ; VKB 350 ; VJJ 110 ; VCA 300 ; VKB 332 ; VKA 300 ; VKB 371 ; VEA 000 ; VKB 372 ; Lithogenese {Sedimentologie} ; Geochemie der Stabilen Isotopen ; Paläozoische Geologie ; Sedimentationsbedingungen ; Petrogenese ; Klastische Sedimentgesteine ; Europa insgesamt {Geologie} ; Karbonatische Sedimentgesteine ; Kohlenstoffkreislauf ; C-isotope ; Jungpaläozoikum ; Paläopedologie ; Kalkkruste ; CO2 ; calcrete ; carbon cycle ; upper Paleozoic ; paleosol ; C-13/C-12 ; Europa ; paläoklima ; Europe ; 38.41 ; 38.61 ; 38.32
    Language: English
    Type: article
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  • 2
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    Elsevier
    In:  Advances in Geophysics, ed.: Renata Dmowska, Warszawa, Elsevier, vol. 47, no. 7, pp. 65-111, pp. L21303, (ISBN: 0-12-018847-3)
    Publication Date: 2005
    Keywords: Fault zone ; Rock mechanics ; Friction ; Fracture ; Physical properties of rocks ; geometry
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  • 3
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    Elsevier
    In:  Advances in Geophysics, ed.: Renata Dmowska, Heidelberg, Elsevier, vol. 47, no. 8, pp. 1-64, pp. 1516, (ISBN: 0-12-018847-3)
    Publication Date: 2005
    Keywords: Crustal deformation (cf. Earthquake precursor: deformation or strain) ; Subduction zone ; USA
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  • 4
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    Elsevier
    In:  Amsterdam, 652 pp., Elsevier, vol. 39, no. XVI:, pp. 227-235, (0-444-51955-6)
    Publication Date: 2005
    Keywords: Seismics (controlled source seismology) ; Applied geophysics ; Wave propagation ; plane ; spherical ; and ; cylindrical ; Waves ; in ; isotropic ; and ; transversely ; isotropic ; solids, ; liquid-solid ; models, ; and ; media ; with ; cylindrical ; inclusions ; (boreholes) ; Textbook of geophysics
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  • 5
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    Nature Publishing Group
    In:  Nature Reviews Microbiology, 12 (10). pp. 686-698.
    Publication Date: 2020-06-23
    Description: Marine phytoplankton blooms are annual spring events that sustain active and diverse bloom-associated bacterial populations. Blooms vary considerably in terms of eukaryotic species composition and environmental conditions, but a limited number of heterotrophic bacterial lineages — primarily members of the Flavobacteriia, Alphaproteobacteria and Gammaproteobacteria — dominate these communities. In this Review, we discuss the central role that these bacteria have in transforming phytoplankton-derived organic matter and thus in biogeochemical nutrient cycling. On the basis of selected field and laboratory-based studies of flavobacteria and roseobacters, distinct metabolic strategies are emerging for these archetypal phytoplankton-associated taxa, which provide insights into the underlying mechanisms that dictate their behaviours during blooms.
    Type: Article , PeerReviewed
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  • 6
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    Nature Publishing Group
    In:  Nature Geoscience, 6 (8). pp. 608-612.
    Publication Date: 2017-10-24
    Description: Owing to the turbulent nature of the ocean, mesoscale eddies are omnipresent. The impact of these transitory and approximately circular sea surface temperature fronts on the overlying atmosphere is not well known. Stationary fronts such as the Gulf Stream have been reported to lead to pronounced atmospheric changes1, 2. However, the impact of transient ocean eddies on the atmosphere has not been determined systematically, except on winds and to some extent clouds3, 4, 5, 6. Here, we examine the atmospheric conditions associated with over 600,000 individual eddies in the Southern Ocean, using satellite data. We show that ocean eddies locally affect near-surface wind, cloud properties and rainfall. The observed pattern of atmospheric change is consistent with a mechanism in which sea surface temperature anomalies associated with the oceanic eddies modify turbulence in the atmospheric boundary layer. In the case of cyclonic eddies, this modification triggers a slackening of near-surface winds, a decline in cloud fraction and water content, and a reduction in rainfall. We conclude that transient mesoscale ocean structures can significantly affect much larger atmospheric low-pressure systems that swiftly pass by at the latitudes investigated.
    Type: Article , PeerReviewed
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  • 7
    Publication Date: 2017-03-27
    Description: An influence of solar irradiance variations on Earth’s surface climate has been repeatedly suggested, based on correlations between solar variability and meteorological variables1. Specifically, weaker westerly winds have been observed in winters with a less active sun, for example at the minimum phase of the 11-year sunspot cycle2, 3, 4. With some possible exceptions5, 6, it has proved difficult for climate models to consistently reproduce this signal7, 8. Spectral Irradiance Monitor satellite measurements indicate that variations in solar ultraviolet irradiance may be larger than previously thought9. Here we drive an ocean–atmosphere climate model with ultraviolet irradiance variations based on these observations. We find that the model responds to the solar minimum with patterns in surface pressure and temperature that resemble the negative phase of the North Atlantic or Arctic Oscillation, of similar magnitude to observations. In our model, the anomalies descend through the depth of the extratropical winter atmosphere. If the updated measurements of solar ultraviolet irradiance are correct, low solar activity, as observed during recent years, drives cold winters in northern Europe and the United States, and mild winters over southern Europe and Canada, with little direct change in globally averaged temperature. Given the quasiregularity of the 11-year solar cycle, our findings may help improve decadal climate predictions for highly populated extratropical regions
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  • 8
    Publication Date: 2020-05-14
    Description: The volcanic arc of the Hellenic subduction zone with its four volcanic centers is of major relevance when evaluating the seismovolcanic hazard for the Aegean region. We present results from a 22-station temporary seismic network (CYCNET) in the central Hellenic Volcanic Arc (HVA). CYCNET recordings allow to analyze the level and spatio-temporal evolution of microseismic activity in this region for the first time. A total of 2175 events recorded between September 2002 and July 2004 are analyzed using statistical methods, cluster analysis and relative relocation techniques. We identify distinct regions with significantly varying spatiotemporal behavior of microseismicity. A large portion of the seismic activity within the upper crust is associated with the presence of islands representing horst structures that were generated during the major Oligocene extensional phase. In contrast, the central part of the Cyclades metamorphic core complex remains aseismic considering our magnitude threshold of 1.8 except one spot where events occur swarm-like and with highly similar waveforms. The highest activity in the study area was identified along the SW–NE striking Santorini–Amorgos zone. Within this zone the submarine Columbo volcano exhibits strong temporal variations of seismic activity on a high background level. This activity is interpreted to be directly linked to the magma reservoir and therein the migration of magma and fluids towards the surface. NE of Columbo where no volcanic activity has yet been reported we observe a similar seismicity pattern with small-scaled activity spots that might represent local pathways of upward migrating fluids or even developing volcanic activity within this zone of crustal weakness. In contrast, the Santorini and Milos volcanic complexes do not show significant temporal variations and low to moderate background activity, respectively. Relating our results to the distribution of historical earthquakes and the GPS-derived horizontal velocity field we conclude that the Santorini–Amorgos zone is presently in the state of right-lateral transtension reflecting a major structural boundary of the volcanic arc subdividing it into a seismically and volcanically quiet western and an active eastern part.
    Type: Article , PeerReviewed
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  • 9
    Publication Date: 2017-07-18
    Description: The granule floatation is a serious issue of the anammox (anaerobic ammonium oxidation) process when high loading rates are applied that results in instability or even system collapse. The present study reports the granule floatation in an anammox reactor when high loading rates were applied. The comparison of enlarged photos taken for the settling and floating granules showed that the two kinds of granules both contained macroscopic gas pockets accounting for 11 +/- 14% of total volume. The settling granules had gas tunnels that could release the gas bubbles, while the floating granules did not. The presence of gas bubbles enclosed in the gas pockets led to the small density of 979.2 +/- 15.8 mg L(-1) and flotation of anammox granules. Consequently, the flotation caused washout of anammox granules and the deterioration of anammox process (volumetric removal rate decreased from 4.00 to 2.46 kg N m(-3) d(-1)). The collection of floating granules, breaking them into small pieces and then returning to the anammox reactor proved an effective control strategy. The volumetric removal rate was finally up to 16.5 kg N m(-3) d(-1) after the control strategy was put into use.
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  • 10
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    Elsevier
    In:  Organic Geochemistry, 39 (8). pp. 1000-1006.
    Publication Date: 2017-06-26
    Description: The anaerobic oxidation of methane (AOM), by converting methane to bicarbonate which is then precipitated as extensive carbonate crusts, is an important methane sink in the Earth’s ocean systems. Here we employ a multidisciplinary approach to investigate the role of microorganisms in carbonate precipitation using biomarker analysis, scanning electron microscopy (SEM) and X-ray diffraction. We examined two microbial mats from the Black Sea and found that one comprised carbonate in both aragonite and Mg calcite forms and most likely ANME-1 archaea, whereas the other contained only Mg calcite and most likely ANME-2 archaea. We conclude, as have others, that the different microbial communities could impart different influences on carbonate mineralogy and morphology. Although further research is needed, this is a contribution to our understanding of those relationships, which could prove critical in the interpretation of ancient sedimentary deposits.
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  • 11
    Publication Date: 2017-06-20
    Description: The spatial variability in the mix of species making up Cold-water coral reef communities is not well known. In this study abundances of a selection of megafauna (Lophelia pertusa, Madrepora oculata, Paragorgia arborea, Primnoa resedaeformis, Mycale lingua, Geodia baretti, Acesta excavata and fish) were quantified throughout 9 manned submersible video transects from 3 reef complexes (Røst Reef, Sotbakken Reef and Traena Reef) on the Norwegian margin. Substrate type (coral structure, rubble, exposed hardground or soft sediment) was also recorded. Variations in the densities of these fauna (with respect to both reef complex and substrate type) were investigated, with spatial covariance between species assessed. For the majority of fauna investigated, densities varied by both reef and substrate. Spatial covariance indicated that some species may be utilising similar habitat niches, but that minor environmental differences may favour colonisation by one or other at a particular reef. Fish densities were generally higher in regions with biogenic substrate (coral structure and coral rubble substrates) than in areas of soft or hardground substrate. Further, fish were more abundant at the northerly Sotbakken Reef at time of study than elsewhere. Community structure varied by reef, and therefore management plans aimed at maintaining the biodiversity of reef ecosystems on the Norwegian margin should take this lack of homogeneity into account.
    Type: Article , PeerReviewed , info:eu-repo/semantics/article
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  • 12
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    Elsevier
    In:  In: Seafloor Geomorphology as Benthic Habitat. , ed. by Harris, P. T. and Baker, E. K. Elsevier, Amsterdam, pp. 457-469. ISBN 978-0-12-385140-6
    Publication Date: 2017-06-20
    Description: The Cap de Creus continental shelf and Cap de Creus canyon are located in the southern most sector of the Gulf of Lions, in the northwestern Mediterranean. The Cap de Creus continental shelf contains sandy and muddy sediments and an abrupt morpho­ logy, with rocky outcrops, relict bioherms, erosive features, and planar bedforms. The Cap de Creus canyon breaches the shelf at a depth of 110 m and denotes a marked dif­ ference in the morphology between the northern and the southern flank, reflecting a different depositional regime. The most common substrates correspond to coarse and medium sands (28%) and silty sediments (40%). The most common megabenthic assemblages of the shelf correspond to the communities of "offshore detritic" (31.95%) and "coastal terrigenous muds" (36.99%), mostly dominated by sea pens, alcyonaceans, and ceriantharians. The northern flank of the Cap de Creus canyon is predominantly depositional, whereas the southern flank is erosional. Rocky outcrops provide the sub­ stratum for cold­water coral (CWC) communities' development, in which the white coral Madrepora oculata is the most abundant species.
    Type: Book chapter , NonPeerReviewed
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  • 13
    Publication Date: 2017-06-27
    Description: There is growing concern about the transfer of methane originating from water bodies to the atmosphere. Methane from sediments can reach the atmosphere directly via bubbles or indirectly via vertical turbulent transport. This work quantifies methane gas bubble dissolution using a combination of bubble modeling and acoustic observations of rising bubbles to determine what fraction of the methane transported by bubbles will reach the atmosphere. The bubble model predicts the evolving bubble size, gas composition, and rise distance and is suitable for almost all aquatic environments. The model was validated using methane and argon bubble dissolution measurements obtained from the literature for deep, oxic, saline water with excellent results. Methane bubbles from within the hydrate stability zone (typically below 500 m water depth in the ocean) are believed to form an outer hydrate rim. To explain the subsequent slow dissolution, a model calibration was performed using bubble dissolution data from the literature measured within the hydrate stability zone. The calibrated model explains the impressively tall flares (〉1300 m) observed in the hydrate stability zone of the Black Sea. This study suggests that only a small amount of methane reaches the surface at active seep sites in the Black Sea, and this only from very shallow water areas (〈100 m). Clearly, the Black Sea and the ocean are rather effective barriers against the transfer of bubble methane to the atmosphere, although substantial amounts of methane may reach the surface in shallow lakes and reservoirs.
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  • 14
    Publication Date: 2017-06-20
    Description: The anaerobic oxidation of methane (AOM) with sulphate, an area currently generating great interest in microbiology, is accomplished by consortia of methanotrophic archaea (ANME) and sulphate-reducing bacteria1, 2. The enzyme activating methane in methanotrophic archaea has tentatively been identified as a homologue of methyl-coenzyme M reductase (MCR) that catalyses the methane-forming step in methanogenic archaea3, 4. Here we report an X-ray structure of the 280 kDa heterohexameric ANME-1 MCR complex. It was crystallized uniquely from a protein ensemble purified from consortia of microorganisms collected with a submersible from a Black Sea mat catalysing AOM with sulphate4. Crystals grown from the heterogeneous sample diffract to 2.1 Å resolution and consist of a single ANME-1 MCR population, demonstrating the strong selective power of crystallization. The structure revealed ANME-1 MCR in complex with coenzyme M and coenzyme B, indicating the same substrates for MCR from methanotrophic and methanogenic archaea. Differences between the highly similar structures of ANME-1 MCR and methanogenic MCR include a F430 modification, a cysteine-rich patch and an altered post-translational amino acid modification pattern, which may tune the enzymes for their functions in different biological contexts.
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  • 15
    Publication Date: 2017-08-28
    Description: Iron limits phytoplankton growth and hence the biological carbon pump in the Southern Ocean1. Models assessing the impacts of iron on the global carbon cycle generally rely on dust input and sediment resuspension as the predominant sources2, 3. Although it was previously thought that most iron from deep-ocean hydrothermal activity was inaccessible to phytoplankton because of the formation of particulates4, it has been suggested that iron from hydrothermal activity5, 6, 7 may be an important source of oceanic dissolved iron8, 9, 10, 11, 12, 13. Here we use a global ocean model to assess the impacts of an annual dissolved iron flux of approximately 9×108 mol, as estimated from regional observations of hydrothermal activity11, 12, on the dissolved iron inventory of the world’s oceans. We find the response to the input of hydrothermal dissolved iron is greatest in the Southern Hemisphere oceans. In particular, observations of the distribution of dissolved iron in the Southern Ocean3 (Chever et al., manuscript in preparation; Bowie et al., manuscript in preparation) can be replicated in our simulations only when our estimated iron flux from hydrothermal sources is included. As the hydrothermal flux of iron is relatively constant over millennial timescales14, we propose that hydrothermal activity can buffer the oceanic dissolved iron inventory against shorter-term fluctuations in dust deposition.
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  • 16
    Publication Date: 2018-03-08
    Description: Brackish coastal groundwater is enriched in Ra, which is transported to surface waters via submarine groundwater discharge (SGD). The Ra activity of the SGD end-member is influenced by a variety of environmental factors including salinity, pH, and isotope half-life. In the York River estuary (YRE), 223Ra, 224Ra, and 226Ra were measured in surface water and shallow groundwater across a range of salinities and additional Ra sources quantified (desorption and diffusion from sediments, input from tidal marshes). The Ra budget of the estuary indicated a major source of Ra that could only be satisfied by SGD. The apparent Ra flux was combined with groundwater Ra end-member activity to estimate SGD volume fluxes of 5–178 L m− 2 d− 1. Each isotope exhibited a different seasonal pattern, with significantly higher 224Ra flux during summer than winter, lower 226Ra SGD flux during summer than winter, and no seasonal differences in 223Ra SGD flux. However, the SGD 224Ra end-member activity varied with seasonal pore water salinity fluctuations, indicating end-member control on seasonal 224Ra flux. Each Ra isotope suggested a different SGD volume flux, indicating that different nuclide regeneration rates may respond to and reflect different flow mechanisms in the subterranean estuary. This work indicates that volume fluxes estimated using geochemical tracers are sensitive to SGD end-member variations and end-member variability must be well-characterized for reliable SGD flux estimates.
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  • 17
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    Elsevier
    In:  Marine Chemistry, 156 . pp. 38-48.
    Publication Date: 2018-03-08
    Description: Solid-solution partitioning of Ra determines the dissolved Ra composition of porewater in marine sands. Therefore, sorption controls also influence the endmember concentration of Ra in submarine groundwater discharge (SGD). Ra is widely used as a tracer of SGD, and constraining sorption controls in permeable sands is necessary to evaluate spatial and temporal variation in Ra groundwater activities. This work presents Ra distribution coefficients measured in seawater (salinity 35) for some common solid sorbents as well as different solution compositions relevant to permeable marine sands and the subterranean estuary. There was a strong correlation of Ra distribution coefficient (Kd = solid-phase Ra/solution Ra) with surface area for size-fractionated sediments (log Kd (L/g) = 0.77 [log S.A. (m2/g)] + 0.73; r2 = 0.76). Ra sorption showed no direct relationship with solid-phase Fe or Mn content of the sands, although removal of visible surficial oxide coatings with dilute acid reduced Kd by a factor of 2 to 3. Synthetic Fe-oxides showed nearly two orders of magnitude difference in Ra sorption. Ferrihydrite had the highest Ra sorption coefficient at 1535 ± 410 L kg− 1, followed by lepidocrocite (174 ± 21 L kg− 1), hematite (75 ± 17 L kg− 1), and goethite (20 ± 8 L kg− 1). A marked increase in Ra adsorption was observed with increasing pH, with the sorption edge of natural sands falling within the pH range of 5–8. The extent of Ra sorption at a given pH varied among different substrates. No effect of dissolved Fe was observed on Ra partitioning. A large increase in Ra Kd was evident with increasing Ba concentration when seawater contained sulfate, opposite the effect that would be expected for sorption competition. No effect of Ba concentration was observed when sulfate was excluded from the ASW, indicating that barite precipitation caused the Kd increase. There was no clear effect of temperature on Ra sorption between 2 and 60 °C. Results of this study show that minor solid-phase components increase the Ra sorption capacity of bulk sands and buffer the dissolved Ra concentration (i.e., the SGD endmember). Solution controls on Ra sorption have the potential to greatly alter the Ra composition of discharging groundwater. Given that high-salinity, high-pH conditions probably prevail in porewater below the sediment–water interface, the actual SGD Ra endmember may be less variable than suggested by compilations that include groundwater from deep and fresh groundwater. Highlights ► Variable Ra partitioning to size-fractionated and diverse sediments was primarily controlled by specific surface area. ► Ra displayed pH-dependent sorption to sands, with a sorption edge between pH 5 and 8. ► No effect on Ra partitioning was observed for temperature or competition by dissolved Fe and Ba.
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  • 18
    Publication Date: 2018-03-08
    Description: Submarine groundwater discharge (SGD) into a shallow lagoon on the west coast of Mauritius Island (Flic-en-Flac) was investigated using radioactive (3H, 222Rn, 223Ra, 224Ra, 226Ra, 228Ra) and stable (2H, 18O) isotopes and nutrients. SGD intercomparison exercises were carried out to validate the various approaches used to measure SGD including radium and radon measurements, seepage rate measurements using manual and automated meters, sediment bulk conductivity and salinity surveys. SGD measurements using benthic chambers placed on the floor of the Flic-en-Flac Lagoon showed discharge rates up to 500 cm/day. Large variability in SGD was observed over distances of a few meters, which were attributed to different geomorphological features. Deployments of automated seepage meters captured the spatial and temporal variability of SGD with a mean seepage rate of 10 cm/day. The stable isotopic composition of submarine waters was characterized by significant variability and heavy isotope enrichment and was used to predict the contribution of fresh terrestrially derived groundwater to SGD (range from a few % to almost 100%). The integrated SGD flux, estimated from seepage meters placed parallel to the shoreline, was 35 m3/m day, which was in reasonable agreement with results obtained from a hydrologic water balance calculation (26 m3/m day). SGD calculated from the radon inventory method using in situ radon measurements were between 5 and 56 m3/m per day. Low concentrations of radium isotopes observed in the lagoon water reflected the low abundance of U and Th in the basalt that makes up the island. High SGD rates contribute to high nutrients loading to the lagoon, potentially leading to eutrophication. Each of the applied methods yielded unique information about the character and magnitude of SGD. The results of the intercomparison studies have resulted a better understanding of groundwater–seawater interactions in coastal regions. Such information is an important pre-requisite for the protection and management of coastal freshwater resources. Highlights ► Large fluctuations in SGD fluxes from 0 to 360 cm/day were observed. ► The integrated shoreline SGD fluxes were between 5 and 56 m3/m day. ► The groundwater contribution in SGD varied from a few % to almost 100%. ► The observed high SGD rates contributed to high nutrients loading to the lagoon.
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  • 19
    Publication Date: 2017-10-12
    Description: In this paper we present an in-depth analysis and synthesis of published and newly acquired data on the chemical and isotopic composition of forearc fluids, fluid fluxes, and the associated thermal regimes in well-studied, representative erosional and accretionary subduction zone (SZ) forearcs. Evidence of large-scale fluid flow, primarily focused along faults, is manifested by widespread seafloor venting, associated biological communities, extensive authigenic carbonate formation, chemical and isotopic anomalies in pore-fluid depth-profiles, and thermal anomalies. The nature of fluid venting seems to differ at the two types of SZs. At both, fluid and gas venting sites are primarily associated with faults. The décollement and coarser-grained stratigraphic horizons are the main fluid conduits at accretionary SZs, whereas at non-accreting and erosive margins, the fluids from compaction and dehydration reactions are to a great extent partitioned between the décollement and focused conduits through the prism, respectively. The measured fluid output fluxes at seeps are high, ∼15–40 times the amount that can be produced through local steady-state compaction, suggesting that in addition, other fluid sources or non-steady-state fluid flow must be involved. Recirculation of seawater must be an important component of the overall forearc output fluid flux in SZs. The most significant chemical and isotopic characteristics of the expelled fluids relative to seawater are: Cl dilution; sulfate, Ca, and Mg depletions; and enrichments in Li, B, Si, Sr, alkalinity, and hydrocarbon concentrations, often distinctive δ18O, δD, δ7Li, δ11B, and δ37Cl values, and variable Sr isotope ratios. These characteristics provide key insights on the source of the fluid and the temperature at the source. Based on the fluid chemistry, the most often reported source temperatures reported are 120–150 °C. We estimate a residence time of the global ocean in SZs of ∼100 Myr, about five times faster than the previous estimate of ∼500 Myr by Moore and Vrolijk, similar to the residence time of ∼90 Myr for fluids in the global ridge crest estimated by Elderfield and Schultz, and ∼3 times longer than the 20–36 Myr estimate by German and von Damm and Mottl. Based on this extrapolated fluid reflux to the global ocean, subduction zones are an important source and sink for several elements and isotopic ratios, in particular an important sink for seawater sulfate, Ca and Mg, and an important source of Li and B.
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  • 20
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    Nature Publishing Group
    In:  Nature Reviews Microbiology, 9 (7). pp. 499-508.
    Publication Date: 2020-06-23
    Description: Biological N2 fixation is an important part of the marine nitrogen cycle as it provides a source of new nitrogen that can support biological carbon export and sequestration. Research in the past decade has focused on determining the patterns of distribution and abundance of diazotrophs, defining the environmental features leading to these patterns and characterizing the factors that constrain marine N2 fixation overall. In this Review, we describe how variations in the deposition of iron from dust to different ocean basins affects the limiting nutrient for N2 fixation and the distribution of different diazotrophic species. However, many questions remain about marine N2 fixation, including the role of temperature, fixed nitrogen species, CO2 and physical forcing in controlling N2 fixation, as well as the potential for heterotrophic N2 fixation.
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  • 21
    Publication Date: 2017-12-12
    Description: There is mounting evidence that driving on the beach has a significant biophysical impact, and it has been suggested in a number of recent studies that driving on the beachface leads to a net loss of sediment from the beach-dune system. Identifying a conclusive link between beach driving and beach erosion is, however, complicated by the natural variability of the environment in both space and time, and it has proven difficult to distinguish the driving signal from this background noise. In this respect, the impacts of beach driving are not clear, making it difficult to develop appropriate management strategies to reduce the impact in either degree or extent. LiDAR data from both Padre Island National Seashore and Assateague Island National Seashore are used in the present study to determine if the differences in beach and dune morphology between restricted and open access sections of the beach are associated with beach driving. Results from Padre Island National Seashore suggest that beach driving does not affect the height and volume of the foredunes, but is responsible for a statistically significant decrease in the elevation of the dune crest and base compared to the control section of beach. The decrease in elevation is ascribed to the compaction and pulverization of seaweed wrack that accumulates along the Texas coast in the spring and summer months, and is responsible for the anchoring of sediment for the growth of new vegetation seaward of the foredune. At Assateague Island National Seashore, driving on the beach is shown to cause a statistically significant change in the beach-dune morphology, with smaller dunes set further back from the shoreline within the open access sections of the beach. Despite the changes in dune morphology at both sites, there is no statistically significant difference in beach-dune volume on either side of the beach access road, which suggests that driving on the beach does not lead to a net loss of sediment from the beach-dune system. Driving on the beach does, however, make the foredune at both sites susceptible to scarping and overwash during tropical storms and hurricanes.
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  • 22
    Publication Date: 2018-03-07
    Description: The boron isotope ratio (δ11B) of foraminifers and tropical corals has been proposed to record seawater pH. To test the veracity and practicality of this potential paleo-pH proxy in deep sea corals, samples of skeletal material from twelve archived modern Desmophyllum dianthus (D. dianthus) corals from a depth range of 274–1470 m in the Atlantic, Pacific, and Southern Oceans, ambient pH range 7.57–8.05, were analyzed for δ11B. The δ11B values for these corals, spanning a range from 23.56 to 27.88, are found to be related to seawater borate δ11B by the linear regression: δ11Bcoral=(0.76±0.28) δ11Bborate+(14.67±4.19) (1 standard error (SE)). The D. dianthus δ11B values are greater than those measured in tropical corals, and suggest substantial physiological modification of pH in the calcifying space by a value that is an inverse function of seawater pH. This mechanism partially compensates for the range of ocean pH and aragonite saturation at which this species grows, enhancing aragonite precipitation and suggesting an adaptation mechanism to low pH environments in intermediate and deep waters. Consistent with the findings of Trotter et al. (2011) for tropical surface corals, the data suggest an inverse correlation between the magnitude of a biologically driven pH offset recorded in the coral skeleton, and the seawater pH, described by the equation: ΔpH=pH recorded by coral−seawater pH=−(0.75±0.12) pHw+(6.88±0.93) (1 SE). Error analysis based on 95% confidence interval(CI) and the standard deviation of the regression residuals suggests that the uncertainty of seawater pH reconstructed from δ11Bcoral is ±0.07 to 0.12 pH units. This study demonstrates the applicability of δ11B in D. dianthus to record ambient seawater pH and holds promise for reconstructing oceanic pH distribution and history using fossil corals.
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  • 23
    Publication Date: 2018-03-06
    Description: A geochemical proxy for surface ocean nutrient concentrations recorded in coral skeleton could provide new insight into the connections between sub-seasonal to centennial scale nutrient dynamics, ocean physics, and primary production in the past. Previous work showed that coralline P/Ca, a novel seawater phosphate proxy, varies synchronously with annual upwelling-driven cycles in surface water phosphate concentration. However, paired contemporaneous seawater phosphate time-series data, needed for rigorous calibration of the new proxy, were lacking. Here we present further development of the P/Ca proxy in Porites lutea and Montastrea sp. corals, showing that skeletal P/Ca in colonies from geographically distinct oceanic nutrient regimes is a linear function of seawater phosphate (PO4 SW) concentration. Further, high-resolution P/Ca records in multiple colonies of Pavona gigantea and Porites lobata corals grown at the same upwelling location in the Gulf of Panamá were strongly correlated to a contemporaneous time-series record of surface water PO4 SW at this site (r2 = 0.7–0.9). This study supports application of the following multi-colony calibration equations to down-core records from comparable upwelling sites, resulting in ±0.2 and ±0.1 μmol/kg uncertainties in PO4 SW reconstructions from P. lobata and P. gigantea, respectively. Inter-colony agreement in P/Ca response to PO4 SW was good (±5–12% about mean calibration slope), suggesting that species-specific calibration slopes can be applied to new coral P/Ca records to reconstruct past changes in surface ocean phosphate. However, offsets in the y-intercepts of calibration regressions among co-located individuals and taxa suggest that biologically-regulated “vital effects” and/or skeletal extension rate may also affect skeletal P incorporation. Quantification of the effect of skeletal extension rate on P/Ca could lead to corrected calibration equations and improved inter-colony P/Ca agreement. Nevertheless, the efficacy of the P/Ca proxy is thus supported by both broad scale correlation to mean surface water phosphate and regional calibration against documented local seawater phosphate variations.
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  • 24
    Publication Date: 2018-03-07
    Description: Structure-based inhibitor design has led to the discovery of a number of potent inhibitors of glycogen phosphorylase b (GPb), N-acyl derivatives of β-d-glucopyranosylamine, that bind at the catalytic site of the enzyme. The first good inhibitor in this class of compounds, N-acetyl-β-d-glucopyranosylamine (NAG) (Ki = 32 μM), has been previously characterized by biochemical, biological and crystallographic experiments at 2.3 Å resolution. Bioisosteric replacement of the acetyl group by trifluoroacetyl group resulted in an inhibitor, N-trifluoroacetyl-β-d-glucopyranosylamine (NFAG), with a Ki = 75 μM. To elucidate the structural basis of its reduced potency, we determined the ligand structure in complex with GPb at 1.8 Å resolution. To compare the binding mode of N-trifluoroacetyl derivative with that of the lead molecule, we also determined the structure of GPb–NAG complex at a higher resolution (1.9 Å). NFAG can be accommodated in the catalytic site of T-state GPb at approximately the same position as that of NAG and stabilize the T-state conformation of the 280s loop by making several favourable contacts to Asn284 of this loop. The difference observed in the Ki values of the two analogues can be interpreted in terms of subtle conformational changes of protein residues and shifts of water molecules in the vicinity of the catalytic site, variations in van der Waals interaction, and desolvation effects.
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  • 25
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    Unknown
    Elsevier
    In:  Advances in Parasitology, 68 . pp. 111-137.
    Publication Date: 2020-04-23
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  • 26
    Publication Date: 2020-07-28
    Description: Carbohydrates on parasite surfaces have been shown to play an important role in host–parasite coevolution, mediating host non-self recognition and parasite camouflage. Parasites that switch hosts can change their surface molecules to remain undetected by the diverse immune systems of their different hosts. However, the question of individual variation in surface sugar composition and its relation to infectivity, virulence, immune evasion and growth of a parasite in its different hosts is as yet largely unexplored. We studied such fitness consequences of variation in surface sugars in a sympatric host–parasite system consisting of the cestode Schistocephalus solidus and its intermediate hosts, a copepod and the three-spined stickleback. Using lectins to analyse the sugar composition, we show that the tapeworm changes its surface according to the invertebrate or vertebrate host. Importantly, sugar composition seems to be genetically variable, as shown by differences among tapeworm sibships. These differences are related to variation in parasite fitness in its second intermediate host, i.e. infectivity and growth. Surface sugar composition may thus be a proximate correlate of the evolutionarily relevant variability in infectivity and virulence of parasites in different hosts.
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  • 27
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    Unknown
    Elsevier
    In:  In: Treatise on Geochemistry. Reference Module in Earth Systems and Environmental Sciences, 5 . Elsevier, Amsterdam, pp. 385-404. 2.Ed. ISBN 978-0-08-099946-3
    Publication Date: 2018-04-19
    Description: A very close coupling exists between changes in atmospheric O2 and CO2 concentrations, owing to the chemistry of photosynthesis, respiration, and combustion. The coupling is not perfect, however, because CO2 variations are partially buffered by reactions involving the inorganic carbon system in seawater, which has no effect on O2. Measurements over the past two decades document variations in O2 on a range of space and time scales, including a long-term decrease driven mostly by fossil fuel burning and seasonal cycles driven by exchanges with the land biosphere and the oceans. In this chapter, these and other features seen in the measurements are described, also discussing variations in the tracer ‘atmospheric potential oxygen,’ which is a linear combination of O2 and CO2 designed to be insensitive to exchanges from the land biosphere and thereby sensitive mostly to oceanic processes. Challenges associated with measuring variations in O2 are addressed, and various applications of the observations are discussed, including quantifying the magnitude of the global land and ocean carbon sinks and testing ocean biogeochemical models. An updated budget for global carbon sinks based on O2 measurements from the Scripps O2 program is presented for the decades of the 1990s and 2000s.
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  • 28
    Publication Date: 2020-07-09
    Description: Marine laminated sediments in dysoxic areas of the ocean floor are an excellent archive for high-resolution climate reconstructions. While the existence of discontinuities produced by natural events, such as underwater landslides (slumps), strong bottom currents, and/or bioturbation is usually acknowledged for long records, the extent of their influence on high-resolution sequences is usually not considered. In the present work we show strong evidence for multiple stratigraphic discontinuities in different gravity and box-cores retrieved off Pisco (Peru) covering the last 600 years. Chronostratigraphies are largely based on cross-correlation of distinct sedimentary structures (determined by X-ray image analysis) and validated using 210Pb, 241Am, and 14C profiles, as well as proxy records. The cross-correlation of distinct stratigraphic layers allows for chronostratigraphic tie points and clearly shows that some sedimentary sequences are continuous across scales of tens of kilometers, indicating that regional processes often determine laminae formation. Some differences in laminae thickness were found among cores, which could be explained by different sedimentation rates, spatially variable deposition of diatom blooms, changes in silica dissolution and partial deposition/erosion caused by bottom currents. Using multiple stratigraphic tie points provides clear evidence for laminated sequences present in some cores to be missing in other cores. Moreover, instantaneous depositions from upslope were identified in all the cores disrupting the continuity of the sediment records. These discontinuities (instantaneous deposits and missing sequences) may be due to slumps, possibly triggered by earthquakes and/or erosion by strong bottom currents. In spite of the missing sequences in some cores, a continuous composite record of the last six centuries was reconstructed from spliced sequences of the different cores, which provides a well-constrained temporal framework to develop further high-resolution proxies in this region. The present work shows that paleoreconstructions developed from single cores, particularly in areas with strong seismic activity and/or strong bottom currents, are subject to both temporal gaps and instantaneous depositions from upslope, both of which could be misinterpreted as abrupt climate changes or anomalous climate events. We stress the need for multiple cores to determine the stratigraphic continuity and chronologies for high-resolution records.
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  • 29
    Publication Date: 2018-06-26
    Description: We present the latest 3D velocity field of the Fennoscandian glacial isostatic adjustment (GIA) process from BIFROST. It is derived from more than 4800 days (13 years) of data at more than 80 permanent GPS sites. We use the GAMIT/GLOBK and the GIPSY/OASIS II software packages for GPS analysis and compare the results. The solution has an internal accuracy at the level of 0.2 mm/year (1 sigma) for horizontal velocities at the best sites. We also present a revised GIA prediction model. At the best sites, the optimal model agrees with the observations to within 0.4 mm/year. However, the model systematically overpredicts the magnitude of horizontal rates in the north. We discuss limitations in computed and presented GNSS station velocities, where especially possible instability over time causing non-linear pattern in vertical time series are considered. In extension, preliminary results from an investigation applying revised analysis strategies on a sparse subset of the database are presented, indicating possible improvements for the future.
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  • 30
    Publication Date: 2017-03-13
    Description: Although rising global sea levels will affect the shape of coastlines over the coming decades1, 2, the most severe and catastrophic shoreline changes occur as a consequence of local and regional-scale processes. Changes in sediment supply3 and deltaic subsidence4, 5, both natural or anthropogenic, and the occurrences of tropical cyclones4, 5 and tsunamis6 have been shown to be the leading controls on coastal erosion. Here, we use satellite images of South American mangrove-colonized mud banks collected over the past twenty years to reconstruct changes in the extent of the shoreline between the Amazon and Orinoco rivers. The observed timing of the redistribution of sediment and migration of the mud banks along the 1,500 km muddy coast suggests the dominant control of ocean forcing by the 18.6 year nodal tidal cycle7. Other factors affecting sea level such as global warming or El Niño and La Niña events show only secondary influences on the recorded changes. In the coming decade, the 18.6 year cycle will result in an increase of mean high water levels of 6 cm along the coast of French Guiana, which will lead to a 90 m shoreline retreat.
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  • 31
    Publication Date: 2017-04-06
    Description: We employ a combined interpretation of Hydrosweep swath bathymetry and high resolution multi-channel seismic reflection data to investigate the development of Cap Timiris Canyon, a newly discovered submarine canyon offshore Mauritania. The dominantly V-shaped and deeply entrenched canyon exhibits many fluvial features including dendritic and meander patterns, cut-off loops and terraces, and is presently incising. Distal meander patterns, confined within a narrow fault-controlled corridor, show several stages of evolution, the latest of which is dominated by a down-system meander-loop migration. Terraces exhibit a variety of internal structures suggesting they originated through different processes including sliding/slumping, uplift-induced incision and lateral accretion. We ascribe canyon origin to an ancient river system in the adjacent presently arid Sahara Desert that breached the shelf during a Plio/Pleistocene sea level lowstand and delivered sediment directly into the slope area. Our data suggest that the initial invading unchannelised sheet of sand-rich turbidity flows initiated canyon formation by gradually mobilising along linear seafloor depressions and fault-controlled zones of weakness. We propose that the development of canyon morphology and structure was influenced by the stages of active flow of the coupling river system, and hence could act as a proxy for understanding the paleo-climatic evolution of a ‘green’ Sahara since Plio/Pleistocene times.
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  • 32
    Publication Date: 2020-07-15
    Description: Chemical disparities at the interface between subducting oceanic crustal rocks and the harzburgitic mantle lead to the formation of reaction zones in the mantle above the subducting slabs composed of hybrid rocks that may carry exotic trace-element patterns and isotopic signatures. Subsequent burial of these metasomatised rocks as part of the progressively subducted slab could deliver trace elements and volatiles to the source region of arc magma. A natural laboratory to study reactions at the slab–mantle interface maybe found in exhumed high-pressure mélanges, where sedimentary, mafic and ultramafic lithologies are juxtaposed and metamorphosed at high-P/T conditions. A mélange zone of that type is found in northern Syros, where metasomatic reaction zones (“blackwalls”) formed on a metre scale at the contact of metasedimentary blueschists and serpentinite. Five different zones within such a contact display the assemblages (I) glaucophane+garnet+phengite+epidote, (II) glaucophane+epidote+chlorite, (III) chlorite+epidote+omphacite±albite (IV) chlorite±titanite±rutile±apatite and (V) serpentine+chromite. Accessory phases, such as apatite, allanite, rutile, titanite, tourmaline, zircon and monazite are abundant in zones II to IV. The observed succession of assemblages together with whole-rock major and trace-element compositions reflect the two dominant processes that are thought to have operated along the lithological contact: (A) diffusion of chemical components driven by the compositional contrast of the juxtaposed rocks, and (B) flux of hydrous fluids along the contact, which depleted (e.g., LILE, SiO2) or enriched (e.g., B, LREE) certain elements in various zones. Thermodynamic modelling is able to closely predict the succession of mineral assemblages as they are expected from diffusion of Mg and Ca across the contact zone. Employed to various P–T conditions and different juxtaposed rock types, this type of modelling could be used to access and evaluate larger portions of the subduction system. Our results support existing models that suggest that mixing and redistribution of major and trace elements in subduction zones may be related to the formation of hybrid rocks in mélange zones
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  • 33
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    Nature Publishing Group
    In:  Nature Geoscience, 4 (6). pp. 398-403.
    Publication Date: 2017-05-11
    Description: The Pacific sector of Antarctica, including both the Antarctic Peninsula and continental West Antarctica, has experienced substantial warming in the past 30 years. An increase in the circumpolar westerlies, owing in part to the decline in stratospheric ozone concentrations since the late 1970s, may account for warming trends in the peninsula region in austral summer and autumn. The more widespread warming in continental West Antarctica (Ellsworth Land and Marie Byrd Land) occurs primarily in austral winter and spring, and remains unexplained. Here we use observations of Antarctic surface temperature and global sea surface temperature, and atmospheric circulation data to show that recent warming in continental West Antarctica is linked to sea surface temperature changes in the tropical Pacific. Over the past 30 years, anomalous sea surface temperatures in the central tropical Pacific have generated an atmospheric Rossby wave response that influences atmospheric circulation over the Amundsen Sea, causing increased advection of warm air to the Antarctic continent. General circulation model experiments show that the central tropical Pacific is a critical region for producing the observed high latitude response. We conclude that, by affecting the atmospheric circulation at high southern latitudes, increasing tropical sea surface temperatures may account for West Antarctic warming through most of the twentieth century.
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  • 34
    Publication Date: 2017-07-17
    Description: Digital macro photography and settling tests were carried out to investigate the morphological and settling characteristics of ANAMMOX granules in a high-rate reactor. The ANAMMOX granules could be divided into settling and floating granules. The settling granules with an average diameter of 2.96 ± 0.99 mm were smaller than the floating granules with an average diameter of 4.58 ± 1.22 mm. A settling model was established and validated to correlate the settling velocity with the density (ρG), mass shape factor (ψmass), shape-correction factor (characterized by sphericity (Φ′) or roundness (ξ)) and projected area equivalent sphere diameter (dP) of ANAMMOX granules. The sphericity was more suitable than the roundness for describing the settling behavior. The sensitivity of four parameters was in the order of ρG, ψmass, dP and Φ′. Based on the settling model, ANAMMOX granules with diameter of 1.75–4.00 mm were supposed to be optimal for the ANAMMOX process.
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  • 35
    Publication Date: 2017-07-14
    Description: Kelp forests represent a major habitat type in coastal waters worldwide and their structure and distribution is predicted to change due to global warming. Despite their ecological and economical importance, there is still a lack of reliable spatial information on their abundance and distribution. In recent years, various hydroacoustic mapping techniques for sublittoral environments evolved. However, in turbid coastal waters, such as off the island of Helgoland (Germany, North Sea), the kelp vegetation is present in shallow water depths normally excluded from hydroacoustic surveys. In this study, single beam survey data consisting of the two seafloor parameters roughness and hardness were obtained with RoxAnn from water depth between 2 and 18 m. Our primary aim was to reliably detect the kelp forest habitat with different densities and distinguish it from other vegetated zones. Five habitat classes were identified using underwater-video and were applied for classification of acoustic signatures. Subsequently, spatial prediction maps were produced via two classification approaches: Linear discriminant analysis (LDA) and manual classification routine (MC). LDA was able to distinguish dense kelp forest from other habitats (i.e. mixed seaweed vegetation, sand, and barren bedrock), but no variances in kelp density. In contrast, MC also provided information on medium dense kelp distribution which is characterized by intermediate roughness and hardness values evoked by reduced kelp abundances. The prediction maps reach accordance levels of 62% (LDA) and 68% (MC). The presence of vegetation (kelp and mixed seaweed vegetation) was determined with higher prediction abilities of 75% (LDA) and 76% (MC). Since the different habitat classes reveal acoustic signatures that strongly overlap, the manual classification method was more appropriate for separating different kelp forest densities and low-lying vegetation. It became evident that the occurrence of kelp in this area is not simply linked to water depth. Moreover, this study shows that the two seafloor parameters collected with RoxAnn are suitable indicators for the discrimination of different densely vegetated seafloor habitats in shallow environments.
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  • 36
    Publication Date: 2018-03-15
    Description: A chemical study of the lichen Ramalina siliquosa complex found in Brittany was conducted. Eight chemotypes were considered and their chemical composition was elucidated for the first time by LC–MS analysis. Ten main compounds were identified: conhypoprotocetraric acid (1), salazinic acid (2), peristictic acid (3), cryptostictic acid (4), protocetraric acid (5), stictic acid (6), norstictic acid (7), hypoprotocetraric acid (8), 4-O-demethylbarbatic acid (9), (+)-usnic acid (10) and 22 minor compounds were reported. The MS/MS fragmentation patterns of each compound of R. siliquosa complex were determined and proposed.
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  • 37
    Publication Date: 2017-06-20
    Description: The coral species Paragorgia arborea and Primnoa resedaeformis are abundant and widely distributed gorgonians in North Atlantic waters. Both species add significant habitat complexity to the benthic environment, and support a host of invertebrate species. Mapping their distribution is an essential step in conservation and resource management, but challenging as a result of their remoteness. In this study, three predictive models — Ecological Niche Factor Analysis, Genetic Algorithm for Rule-set Production and Maximum Entropy modeling (MaxEnt) were applied to predict the distribution of species' suitable habitat across a region of Røst Reef (Norwegian margin) based on multiscale terrain variables. All three models were successful in predicting the habitat suitability for both gorgonian species across the study area, and the MaxEnt predictions were shown to outperform other predictions. All three models predicted the most suitable habitats for both species to mainly occur along the ridges and on the upper section of the large slide, suggesting both species preferentially colonize topographic highs. Jackknife tests for MaxEnt predictions highlighted the seabed aspect in relation to P. arborea distribution, and the seabed relative position (curvature) in relation to the distribution of both species. Given the vulnerability of deep-water corals to anthropogenic impacts, further comparative study over a wider study area would be particularly beneficial for the management of the species.
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  • 38
    Publication Date: 2017-06-27
    Description: In several fields of cell biology, correlative microscopy is applied to compare the structure of objects at high resolution under the electron microscope with low resolution light microscopy images of the same sample. It is, however, difficult to prepare samples and marker systems that are applicable for both microscopic techniques for the same specimen at the same time. In our studies, we used microbial mats from Cold Seep communities for a simple and rapid correlative microscopy method. The mats consist of bacterial and archaeal microorganisms, coupling reverse methanogenesis to the reduction of sulfate. The reverse methanogenic pathway also generates carbonates that precipitate inside the mat and may be the main reason for the formation of a microbial reef. The mat shows highly differentiated aggregates of various organisms, tightly interconnected by extracellular polysaccharides. In order to investigate the role of EPS as adhesive mucilage for the biofilm and as a precipitation matrix for carbonate minerals, samples were embedded in a hydrophilic resin (Lowicryl K4 M). Sections were suitable for light as well as electron microscopy in combination with lectins, either labeled with a fluorescent marker or with colloidal gold. This allows lectin mapping at low resolution for light microscopy in direct comparison with a highly resolved electron microscopic image.
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  • 39
    Publication Date: 2017-06-27
    Description: Samples collected from the shelf-edge wedge using surface grab samples and the Jago submersible constrain the KwaZulu-Natal shelf-edge wedge to a late Pliocene age on the basis of the absence of Gephyrocapsa oceanica s.l. and Discoaster brouweri, and the presence of Calcidiscus macintyrei. This correlates with proposed Tertiary sea-level curves for southern Africa and indicates relative sea-level fall during the late Pliocene coupled with hinterland uplift. Exposed failure scarps in the upper portions of submarine canyons yield sediment samples of early Pleistocene ages, indicating the uppermost age of deposition of clinoform topsets exposed in the scarp walls. Partially consolidated, interbedded silty and sandy deposits of similar age outcrop in the thalweg of Leven canyon at a depth of 150 m. These sediments provide an upper age limit of the shelf-edge wedge of early Pleistocene, giving a sedimentation rate of this wedge of 162–309 m/Ma. The distribution of widespread basal-most Pleistocene sediments on the upper slope indicates that these sediments escaped major reworking during sea-level falls associated with Pleistocene glaciations and remain as relict upper slope veneers. The absence of more recent sediments suggests that this area has been a zone of sediment bypass or starvation since the early Pleistocene. Areas where younger sediments mantle deposits of early Pleistocene ages represent areas of offshore bedload parting, re-distributing younger Holocene sediment offshore and downslope.
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  • 40
    facet.materialart.
    Unknown
    Elsevier
    In:  Ecological Engineering, 52 . pp. 290-297.
    Publication Date: 2018-03-08
    Description: Oil derived from photosynthetic microalgae is a potential major source of renewable energy, but while industrial-scale efforts to grow algal biomass are underway, it remains an expensive process. The cost of biomass production may be offset by using the algae to simultaneously remediate chemical contaminants from wastewater or natural surface waters. This work examines trace metal accumulation and cycling in algae grown for biofuel use, and evaluates the potential of this approach for remediation purposes. In the system studied, a natural, mixed-species algal community was allowed to develop on a shallow floway fed with water from the York River estuary (VA, USA). Accumulation of metals ranged widely in the algal biomass (Fe 〉 Mn 〉 〉Pb 〉 Cu 〉 V 〉 Cd) and represented removal from the dissolved phase of between 1 and 87% (for Cd and Pb, respectively). These metals were selected for analysis because of their differing geochemical behavior, as well as their importance as micronutrients (Fe, Mn, Cu, V) and toxicants (Pb, Cu, Cd). Most of the algal metal inventory was partitioned in the intracellular fraction (∼30% for Mn, 50–90% for other metals; operationally defined using a chemical wash technique), indicating accumulation due to biochemical demand, not adsorption to cell surfaces. Although algal community composition was similar on the upstream and downstream ends of the floway, the metal inventory was two-fold higher on the downstream end. Differences in metal accumulation may have been related to algal physiology or to pronounced cycles of water pH and dissolved oxygen driven by algal photosynthesis and respiration. Differences in metal removal efficiency and biomass inventory indicate that algal floway systems may be manipulated to optimize remediation of metal-contaminated water.
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  • 41
    Publication Date: 2018-03-08
    Description: Submarine groundwater discharge (SGD) to the ocean supplies Sr with less radiogenic 87Sr/86Sr than seawater, and thus constitutes an important term in the Sr isotope budget of the modern ocean. However, few data exist for Sr in coastal groundwater or in the geochemically dynamic subterranean estuary (STE). We examined Sr concentrations and isotope ratios from nine globally-distributed coastal sites and characterized the behavior of Sr in the STE. Dissolved Sr generally mixed conservatively in the STE, although large differences were observed in the meteoric groundwater end-member Sr concentrations among sites (0.1–24 μM Sr). Strontium isotope exchange was observed in the STE at five of the sites studied, and invariably favored the meteoric groundwater end-member signature. Most of the observed isotope exchange occurred in the salinity range 5–15, and reached up to 40% exchange at salinity 10. Differences in fresh groundwater Sr concentrations and isotope ratios (87Sr/86Sr = 0.707–0.710) reflected aquifer lithology. The SGD end-member 87Sr/86Sr must be lower than modern seawater (i.e., less than 0.70916) in part because groundwater Sr concentrations are orders of magnitude higher in less-radiogenic carbonate and volcanic island aquifers. A simple lithological model and groundwater Sr data compiled from the literature were used to estimate a global average groundwater end-member of 2.9 μM Sr with 87Sr/86Sr = 0.7089. This represents a meteoric-SGD-driven Sr input to the ocean of 0.7–2.8 × 1010 mol Sr y−1. Meteoric SGD therefore accounts for 2–8% of the oceanic Sr isotope budget, comparable to other known source terms, but is insufficient to balance the remainder of the budget. Using reported estimates for brackish SGD, the estimated volume discharge at salinity 10 (7–11 × 1015 L y−1) was used to evaluate the impact of isotope exchange in the STE on the brackish SGD Sr flux. A moderate estimate of 25% isotope exchange in the STE gives an SGD Sr end-member 87Sr/86Sr of 0.7091. The brackish SGD Sr flux thus accounts for 11–23% of the marine Sr isotope budget, but does not appear sufficient to balance the ∼40% remaining after other known sources are included. Substantial uncertainties remain for estimating the SGD source of Sr to the global ocean, especially in the determination of the volume flux of meteoric SGD, and in the paucity of measurements of groundwater Sr isotope composition in major SGD regions such as Papua New Guinea, the South America west coast, and West Africa. Consequently, our global estimate should be viewed with some caution. Nevertheless, we show that the combined sources of meteoric SGD and brackish SGD coupled with isotope exchange in the STE may constitute a substantial component (∼13–30%) of the modern oceanic 87Sr/86Sr budget, likely exceeding less radiogenic Sr inputs by sedimentary diagenesis and hydrothermal circulation through the mid-ocean ridge system. Temporal variation in SGD Sr fluxes and isotope composition may have contributed to fluctuations in the oceanic 87Sr/86Sr ratio over geologic time.
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  • 42
    Publication Date: 2018-03-08
    Description: The flow of groundwater beneath barrier islands has been cited as a possible pathway for salt water and chemical exchange between a protected embayment and the open sea. Evidence is presented that identifies an exchange of groundwater through a highly permeable paleoinlet along the barrier beach of Cavallino, which separates the northern Venice Lagoon from the Adriatic Sea. We utilized both point measurements of submarine groundwater discharge (SGD) and a geophysical investigation of the subsurface resistivity to analyze the movement of saline groundwater. Discharge of groundwater and associated nutrients, was higher at the site of a former inlet than at a similar site along the barrier and modulated by the difference in tidal water level between the lagoon and Adriatic Sea. If the measured conditions are typical, storm surge barriers could potentially result in a saline groundwater flow of up to 1.5×106 m3 d−1 into the lagoon.
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  • 43
    Publication Date: 2018-03-09
    Description: Prompted by recent data analyses suggesting that the flux of particulate organic carbon sinking into deep waters is determined by fluxes of mineral ballasts, we undertook a study of the relationships among organic matter (OM), calcium carbonate, opal, lithogenic material, and excess aluminum fluxes as part of the MedFlux project. We measured fluxes of particulate components during Spring and Summer of 2003, and Spring of 2005, using a swimmer-excluding sediment trap design capable of measuring fluxes both in a time-series (TS) mode and in a configuration for obtaining particle settling velocity (SV) profiles. On the basis of these studies, we suggest that distinct OM–ballast associations observed in particles sinking at a depth of ∼200 m imply that the mechanistic basis of the organic matter–ballast association is set in the upper water column above the Twilight Zone, and that the importance of different ballast types follows the seasonal succession of phytoplankton. As in other studies, carbonate appears to enhance the flux of organic matter over opal. Particles must be at least half organic matter before their settling velocity is affected by ballast concentration. This lack of change in ballast composition with SV in particles with 〈40% OM content suggests that particle SV reaches a maximum because of the increasing importance of inertial drag. Relative amounts of OM and opal decrease with depth due to decomposition and dissolution; carbonates and lithogenic material contribute about the same amount to total mass, or increase slightly, throughout the water column. The high proportion of excess Al cannot be explained by its incorporation into diatom opal or reverse weathering, so Al is most likely adsorbed to particulate oxides. On shorter time scales, dust appears to increase particle flux through its role in aggregation rather than by nutrient inputs enhancing productivity. We suggest that the role of dust as a catalyst in particle formation may be a central mechanism in flux formation in this region, particularly when zooplankton fecal pellet production is low.
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  • 44
    Publication Date: 2018-03-08
    Description: Trace metals in the ocean act as both essential micro-nutrients and as toxins. There are relatively few multi-element studies of dissolved trace metals in the ocean, and none from the Gulf of Aqaba, Red Sea. This semi-enclosed basin surrounded by desert is a natural laboratory for studying the impact of atmospheric dry deposition of trace metals on the ocean surface. We have combined measurement of dissolved metals in seawater with measurements of the flux of metals associated with dry deposition. The total dissolved trace metal concentrations in Gulf of Aqaba water are generally higher (Fe, Cu, Zn, Co, Mn, Pb) or similar (Ni, Al, Cd, Mo) to those measured in the open North Atlantic Ocean. The concentrations of elements that are highly enriched in aerosols relative to Al (e.g. Cd, Pb, Zn and Cu) are not necessarily proportionally enriched in surface seawater when compared to Al, indicative of the high reactivity of these elements in seawater. Iron concentrations in the Gulf of Aqaba are high relative to Al, despite the fact that the aerosols are not more enriched in Fe relative to Al. There may be additional sources of dissolved iron to the Gulf of Aqaba, not associated with Al. Alternatively, intense photochemically-driven redox cycling may act to enhance Fe dissolution from aerosols, or may otherwise increase the lifetime of Fe in the water column, relative to Al. Copper concentrations in the Gulf of Aqaba are close to the value found to be a threshold for Cu toxicity in this region. A surface maximum in Cd:P is found in the Gulf of Aqaba, in contrast to the more typical surface minimum in this ratio observed in other locations. The surface maximum appears to be driven by atypically low uptake of Cd relative to P. A low Cd:P uptake ratio for this region is consistent with known environmental determinants of low Cd:P uptake, such as high concentrations of dissolved Zn and Fe, and a predominance of small phytoplankton including cyanobacteria. Highlights ► We measured dissolved trace metal concentrations in the Gulf of Aqaba four times. ► Iron concentrations are high relative to Al concentrations. ► Cu concentrations are close to the threshold for Cu toxicity in this region. ► A surface maximum in Cd:P is driven by unusually low uptake of Cd relative to PO4. ► This is consistent with the dominance of small phytoplankton and high Fe levels.
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  • 45
    Publication Date: 2020-08-12
    Description: The four naturally-occurring radium isotopes (223Ra, 224Ra, 226Ra and 228Ra) were used to estimate the submarine groundwater discharge (SGD) in the Isola La Cura marsh area in the northern Venice Lagoon (Italy). By determining the radium contributors to the study area (river, coastal ocean and sediments) the radium excess in the lagoon water was quantified through a mass balance model. This radium excess is attributed to a submarine groundwater discharge source and represents the most important input of radium. Possible endmembers were considered from analysis of groundwater samples (subtidal and marsh piezometers, marsh wells and seepage meters) that were enriched in Ra by one to two orders of magnitude relative to surface waters. In particular, a permeable layer at 80 cm depth in the surrounding marsh is considered to be representative of the most likely SGD source, although similar radium activities were measured in other subtidal porewater samples collected in the Isola La Cura area. The estimated SGD flux to the study area ranged from 1 · 109 to 6 · 109 L·d− 1, the same order of magnitude as the overall riverine input to the lagoon (3 · 109 L·d− 1). A major fraction of this SGD flux is likely recirculated seawater, as evidenced by the endmember salinity. The water residence time of 2 days was estimated by both using the shortest-lived radium isotope and estimating the volume of water exchanged between the lagoon and the open sea during a tidal cycle (tidal prism approach). This SGD flux could be used to estimate the input of other chemical species (metals, nutrients, etc.) via SGD which might affect the Venice Lagoon ecosystem.
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  • 46
    Publication Date: 2020-08-12
    Description: There is increasing evidence that submarine groundwater discharge (SGD) in many areas represents a major source of dissolved chemical constituents to the coastal ocean. In Great South Bay, NY, previous studies have shown that the discharge of nutrients with SGD may cause harmful algal blooms. This study estimates SGD to Great South Bay during August 2006 by performing a mass balance for each of the dissolved Ra isotopes (224Ra, 223Ra, 228Ra, 226Ra). The budget indicates a major unknown source (between 30 and 60% of the total input) of Ra to the bay. This imbalance can be resolved by a flux of Ra-enriched groundwater on the order of 3.5–4.5 × 109 L d− 1, depending on the Ra isotope. The Ra-estimated SGD rates compare well with those previously estimated by models of flow that decreases exponentially away from shore. Compared to previous reports of fresh groundwater discharge to the bay, the Ra-estimated discharge must comprise approximately 90% recirculated seawater. The good agreement between Ra- and model-estimated flow rates indicates that the primary SGD endmember may be best sampled at shallow depths in the sediments a short distance bayward of the low tide line.
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  • 47
    Publication Date: 2018-03-09
    Description: Seasonal (Spring and Summer 2002) concentrations of dissolved (〈0.22 μm) trace metals (Ag, Al, Co, Cu, Mn, Ni, Pb), inorganic nutrients (NO3, PO4, Si), and DOC were determined in groundwater samples from 5 wells aligned along a 30 m shore-normal transect in West Neck Bay, Long Island, NY. Results show that significant, systematic changes in groundwater trace metal and nutrient composition occur along the flowpath from land to sea. While conservative mixing between West Neck Bay water and the groundwaters explains the behavior of Si and DOC, non-conservative inputs for Co and Ni were observed (concentration increases of 10- and 2-fold, respectively) and removal of PO4 and NO3 (decreases to about half) along the transport pathway. Groundwater-associated chemical fluxes from the aquifer to the embayment calculated for constituents not exhibiting conservative behavior can vary by orders of magnitude depending on sampling location and season (e.g. Co, 3.4 × 102– 8.2 × 103 μmol d−1). Using measured values from different wells as being representative of the true groundwater endmember chemical composition also results in calculation of very different fluxes (e.g., Cu, 6.3 × 103 μmol d−1 (inland, freshwater well) vs. 2.1 × 105 μmol d−1(seaward well, S = 17 ppt)). This study suggests that seasonal variability and chemical changes occurring within the subterranean estuary must be taken into account when determining the groundwater flux of dissolved trace metals and nutrients to the coastal ocean.
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  • 48
    Publication Date: 2018-03-09
    Description: A mass balance for the naturally-occurring radium isotopes (224Ra, 223Ra, 228Ra, and 226Ra) in Jamaica Bay, NY, was conducted by directly estimating the individual Ra contributions of wastewater discharge, diffusion from fine-grained subtidal sediments, water percolation through marshes, desorption from resuspended particles, and water exchange at the inlet. The mass balance revealed a major unknown source term accounting for 19–71% of the total Ra input, which could only be resolved by invoking a source from submarine groundwater. Shallow (〈 2 m depth) groundwater from permeable sediments in Jamaica Bay was brackish and enriched in Ra relative to surface bay waters by over two orders of magnitude. To balance Ra fluxes, a submarine groundwater input of 0.8 × 109–9.0 × 109 L d− 1 was required. This flux was similar for all four isotopes, with individual estimates varying by less than a factor of 2. Our calculated groundwater flux was 6- to 70-fold higher than the fresh groundwater discharge to the bay estimated by hydrological methods, but closely matched direct flow rates measured with seepage meters. This suggests that a substantial portion of the discharge consisted of recirculated seawater. The magnitude of submarine groundwater discharge varied seasonally, in the order: summer 〉 autumn 〉 spring. Chemical analyses suggest that the recirculated seawater component of submarine groundwater delivers as much dissolved nitrogen to the bay as the fresh groundwater flux.
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  • 49
    Publication Date: 2018-01-04
    Description: Zircon is a common mineral in continental crustal rocks. As it is not easily altered in processes such as erosion or transport, this mineral is often used in the reconstruction of geological processes such as the formation and evolution of the continents. Zircon can also survive under conditions of the Earth’s mantle, and rare cases of zircons crystallizing in the mantle significantly before their entrainment into magma and eruption to the surface have been reported1,2,3. Here we analyse the isotopic and trace element compositions of large zircons of gem quality from the Eger rift, Bohemian massif, and find that they are derived from the mantle. (U–Th)/He analyses suggest that the zircons as well as their host basalts erupted between 29 and 24 million years ago, but fragments from the same xenocrysts reveal U–Pb ages between 51 and 83 million years. We note a lack of older volcanism and of fragments from the lower crust, which suggests that crustal residence time before eruption is negligible and that most rock fragments found in similar basalts from adjacent volcanic fields equilibrated under mantle conditions. We conclude that a specific chemical environment in this part of the Earth’s upper mantle allowed the zircons to remain intact for about 20–60 million years.
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  • 50
    Publication Date: 2017-12-13
    Description: The convergence between the Indian plate and the southern margin of the Eurasian continent created an active continental margin from Late Jurassic until about 40 Ma ago, which then evolved to form the Himalaya and the Tibetan Plateau during the continental collision stage. Post-collisional magmatism in southern Tibet, north of the Yarlung Zangbo Suture Zone (YZSZ) has been active since 45 Ma and is related to normal faulting and extensional tectonism. To date no such magmatism was reported within the YZSZ itself. This paper reports on the discovery of Miocene shoshonites within the YZSZ. They are significant because the magma traveled, at least in part, through oceanic crust, thus limiting interaction with the continental crust to the mid-crustal level and which affected the post-collisional magmatic rocks occurring in the northern part of the subduction system. In addition, xenoliths and xenocrysts of crustal origin in these rocks constrain the nature of metamorphic rocks underlying the YZSZ at mid-crustal level. The geochemical signatures of the shoshonitic rocks, including Nd and Sr isotope systematics, indicate derivation from a garnet-bearing middle continental crustal source. Crustal imprint complicates modeling of the petrogenetic processes which occurred prior to mid-crustal ponding of the magma which took place between 11 and 17 Ma at depths of 40 to 50 km. The significant role of crustal contamination raises serious concerns about models proposed for similar magmatic activity elsewhere in the Himalaya and the Tibetan Plateau.
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  • 51
    Publication Date: 2017-12-13
    Description: The purpose of this first synthesis is to summarize findings on the Yarlung Zangbo Suture Zone (YZSZ) ophiolites and discuss still remaining problems. The YZSZ studied for almost 30 years and is the youngest of the sutures recognized on Tibet Plateau. It is now acknowledged that the YZSZ is a complex assemblage of sedimentary, metamorphic and igneous rocks created during and shortly after the collision between India and Eurasia. The ages of the various lithologies span a time interval from the Jurassic to the Middle Miocene, with some Permian and Devonian exotic blocks from mélange zone. The YZSZ is characterized by ophiolitic complexes and ophiolitic mélange. The ophiolites are of two types: non dismembered and dismembered sections. The non disturbed sections, although tectonically reworked, are observed along the segment from Dazhuqu to Jiding in Xigaze area and Spontang ophiolite. The dismembered sequences are found in various locations such as Nidar, Kiogar, Jungbwa, Saga, Sangsang, Xigugabu, and Luobusa. The incomplete stratigraphic log could be connected to intraoceanic or orogenetic origins. The ophiolites are distributed into two groups of ages: the Luobusa, Zedang and Kiogar sequences being Jurassic-Lower Cretaceous whereas all other sequences are of Lower Cretaceous age. Compilation of geochronological data suggest that some ophiolite sequences might have evolved for over more than 70 My from their initial genesis to obduction which occurred around 70–90 My ago. Ophiolites differ in terms of petrological and geochemical aspects however, they were all generated in suprasubduction zone and more specifically in arc (few fore-arc) and back-arc settings. Synthesis of more than 700 geochemical analyses show variable mixing of components from N-MORB-type to IAT-CAB and to OIB end-members. The Jurassic ophiolites show the maximum of arc component while the Lower Cretaceous ones show little to strong mixing. In addition, most ophiolites were created in short lived (30 My) basins and generated close to the Eurasiatic continental margin. We propose that Ladakh–Tibet ophiolites were generated in a suprasubduction context similar to Mariana arc, interarc and back-arc or Tonga–Lau system. The variable arc signature of these ophiolites is directly related to their initial position within the suprasubduction system.
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  • 52
    Publication Date: 2017-12-13
    Description: The Yarlung Zangbo Suture Zone (YZSZ), southern Tibet, is a discontinuous belt that is more than 2000 km long, composed of the remnants of Neo-Tethyan Mesozoic ocean. One of these relicts is the Xiugugabu ophiolitic massif which is a mantle thrust sheet of more than 260 km2 overlying the Cretaceous tectonic mélange south of the YZSZ in SW Tibet. The massif is composed of harzburgites and clinopyroxene–harzburgites with porphyroclastic and porphyromylonitic textures. In the southern part of the massif, peridotites were intruded by amphibole-bearing microgabbro and microgabbronorite sills. A diabase unit which is overlaid by a sedimentary sequence crops out on the NE flank of the massif. Mineral chemistry in harzburgites and clinopyroxene–harzburgites indicates compositions similar to abyssal and forearc peridotites. Peridotites are slightly LREE depleted to enriched with [La/Yb]CN 0.06–2.8 and [La/Sm]CN 0.34–2.64. These ultramafic rocks are inferred to be the residues of 5–25% of partial melting of a depleted mantle that has been enriched by percolating metasomatic melts in a suprasubduction environment. Amphibole–microgabbro and amphibole–microgabbronorite sills are mostly composed of brown to green amphibole, calcic plagioclase, clinopyroxene, ilmenite and orthopyroxene in gabbronorite. Textures and compositions of the brown amphiboles indicate a near-solidus high temperature hydrothermal origin (〉 800 °C). These intrusive rocks are tholeiitic and show N-MORB type REE patterns ([La/Yb]NC 0.35–0.90), a LILE (mainly Th) enrichment and noticeable Nb, Ta and Ti negative anomalies. They have a suprasubduction affinity and were formed in a back-arc basin setting. The diabase unit outcropping to the NE of the massif is not directly related to the ultramafic and mafic ophiolitic rocks. The diabase shows LREE enriched patterns ([La/Yb]NC 8–8.9) and slight Nb, Ta and Ti negative anomalies. The diabase has an intraplate affinity and could have been derived from a mantle source enriched by subduction-related fluids. The absence of continental crustal assimilation indicates that these rocks were probably emplaced in the Jurassic, in an oceanic environment after the Triassic disaggregation of the Indian plate. The data are consistent with the recent geodynamic model proposed for the central part of the suture for the closure of the Neo-Tethys and suggest that the geodynamic evolution of the western part of the basin was comparable to the central part. Research Highlights ► Xiugugabu massif represents the mantle section of an ophiolite. ► Xiugugabu massif comprises harzburgite and cpx-harzburgite intruded by mafic sills. ► Peridotites were metasomatised by suprasubduction melts in an arc–forearc setting. ► Peridotites were brought up to the Moho depth in a back-arc extensional setting. ► Peridotites were intruded by mafic sills of back-arc affinities.
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  • 53
    Publication Date: 2018-01-04
    Description: The Gaoligongshan metamorphic belt, located east of the Eastern Himalayan Syntaxis (EHS) in the Yunnan province, southwestern China, is a compelling region in which to determine temporal constrains on crustal dynamic processes related to the Himalayan orogeny. We applied multi-system geo- and thermochronology (900 °C to 〈50 °C) to orthogneiss and mylonites from a major shear zone in the southern Gaoligongshan in order to elucidate the magmatic, cooling and exhumation history of this belt. Zircon U/Pb data reveal three magmatic events at ∼486 Ma, ∼136 Ma and ∼76 Ma. Similar ages are found in orthoderivative rocks of the neighboring Tengchong and Baoshan blocks, and the Gangdese batholith, suggesting that the southern Gaoligongshan is composed of an assemblage of Lhasa and Qiangtang terrane derived rocks. Muscovite Rb/Sr ages of 35–21 Ma are coeval with the onset of lateral crustal displacement along major shear zones in Eastern Tibet and Indochina, and with the post-collision volcanic activity in western Yunnan. Biotite Rb/Sr and mica 40Ar/39Ar ages provide evidence that mylonitization along the Gaoligongshan shear zone and crustal rotation of the Tengchong and Baoshan blocks proceeded during the Miocene, between 19 and 12 Ma, when the rocks rapidly cooled through the 350–280 °C temperature range. Almost identical 40Ar/39Ar ages reported for the Karakorum–Jiali–Parlung Fault system in Western Tibet suggest that the Gaoligongshan shear zone is the southeastern continuation of this fault, recording the eastward extrusion of Tibet and crustal movement around the EHS. The final stage of exhumation of the Gaoligongshan occurred between 8 and 5 Ma at an average exhumation rate of ∼3 km/Ma as documented by apatite fission-track and apatite (U–Th–Sm)/He data. This rapid exhumation was triggered by crustal root delamination and opening of the Andaman sea. Our results clearly show that the complex tectonothermal evolution of the Gaoligongshan was influenced by Tibetan extrusion and escape tectonics associated with lower crustal flow around the EHS and the southeastward movement of Indochina and back-arc extension in response to Andaman seafloor spreading.
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  • 54
    Publication Date: 2017-12-13
    Description: The Yarlung Zangbo Suture Zone (YZSZ) is believed to be composed of material largely derived from the destruction of the Neo-Tethys that occurred from early Mesozoic to early Cenozoic. We report here geochronological and petrological data obtained for newly discovered alkaline gabbro blocks embedded in a mélange zone of the western YZSZ. Single zircon U–Pb analyses from one representative gabbro sample by SIMS (Secondary Ion Mass Spectrometry) yielded a combined crystallization age of about 363.7 ± 1.7 Ma (1σ). In situ Hf isotopic analyses yielded εHf(t) values of + 2.6 to + 5.5, suggesting an enriched mantle source. All of the gabbro samples show typical Ocean Island Basalt (OIB) affinity with little or no continental crust contamination. They also display strong geochemical similarities with the Hawaii basalts and the Xigaze seamount basalts suggestive of their intra-oceanic setting. These observations, in combination with the Early Carboniferous layered gabbros reported at Luobusa, indicate that these rocks could represent remnants of the Paleo-Tethys. We propose that a branch ocean separating the Western Qiangtang terrane and the Lhasa terrane from the Gondwana continent might have been present during the Late Devonian and the Early Carboniferous, providing new constrains on the configuration of Paleo-Tethys in Tibetan Plateau during early Late Paleozoic. Research Highlights ► Late Devonian OIB alkaline gabbro occurs in the Yarlung Zangbo Suture Zone; the gabbro samples show typical Ocean Island Basalt affinity; a branch ocean separates the Qiangtang and the Lhasa from Gondwana during Devonian.
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  • 55
    Publication Date: 2018-03-09
    Description: Distributions of dissolved vitamin B12 and total dissolved Co were measured to gain an understanding of the cycling of these interdependent micronutrients in six marine settings including; an upwelling location, a semi-enclosed bay, two urban coastal systems, and two open ocean locations. Along the coast of Baja California, Mexico, concentrations of B12 and dissolved Co varied from 0.2 to 11 pM and 180 to 990 pM, respectively. At a nearby upwelling station, vitamin B12 and Co concentrations ranged from 0.3 to 7.0 pM and 22 to 145 pM, and concentrations did not correlate with upwelling intensity. Concentrations of B12 were highest within Todos Santos Bay, a semi-enclosed bay off the coast of Baja California, Mexico, during a dinoflagellate bloom, ranging from 2 to 61 pM, while Co concentrations varied between 61 and 194 pM. In the anthropogenically impacted Long Island Sound, NY, U.S.A., B12 levels were between 0.1 and 23 pM and Co concentrations varied from 60 to 1900 pM. However, anthropogenic inputs were not evident in B12 levels in the San Pedro Basin, located outside Los Angeles, Ca, U.S.A., where concentrations of B12 were 0.2–1.8 pM, approximating observed open ocean B12 concentrations. In the Southern Ocean and North Atlantic Ocean, B12 levels were 0.4–4 pM and 0.2–2 pM, respectively. Total Co concentrations in the Southern Ocean and North Atlantic tended to be low; measuring 26–59 pM and 15–80 pM, respectively. These low Co concentrations may limit B12 synthesis and its availability to B12-requiring phytoplankton because the total dissolved Co pool is not necessarily entirely bioavailable.
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  • 56
    Publication Date: 2017-12-13
    Description: Arc magmas are commonly assumed to form by melting of sub-arc mantle that has been variably enriched by a component from the subducted slab. Although most magmas that reach the surface are not primitive, the impact of assimilation of the arc crust is often ignored with the consequence that trace element and isotopic compositions are commonly attributed only to varying contributions from different components present in the mantle. This jeopardises the integrity of mass balance recycling calculations. Here we use Sr and O isotope data in minerals from a suite of volcanic rocks from St Lucia, Lesser Antilles arc, to show that assimilation of oceanic arc basement can be significant. Analysis of 87Sr/86Sr in single plagioclase phenocrysts from four Soufrière Volcanic Complex (SVC; St Lucia) hand samples with similar composition (87Sr/86Sr = 0.7089–0.7091) reveals crystal isotopic heterogeneity among hand samples ranging from 0.7083 to 0.7094 with up to 0.0008 difference within a single hand sample. measurements in the SVC crystals show extreme variation beyond the mantle range with +7.5 to ‰ for plagioclase (), +10.6 to ‰ for quartz (), +9.4 to ‰ for amphibole () and +9 to ‰ for pyroxene () while older lavas (Pre-Soufriere Volcanic Complex), with less radiogenic whole rock Sr composition (87Sr/86Sr = 0.7041–0.7062) display values closer to mantle range: +6.4 to ‰ for plagioclase () and +6 to ‰ for pyroxene (). We argue that the 87Sr/86Sr isotope disequilibrium and extreme values provide compelling evidence for assimilation of material located within the arc crust. Positive correlations between mineral and whole rock 87Sr/86Sr, 143Nd/144Nd and 206,207,208Pb/204Pb shows that assimilation seems to be responsible not only for the isotopic heterogeneity observed in St Lucia but also in the whole Lesser Antilles since St Lucia encompasses almost the whole-arc range of isotopic compositions. This highlights the need for detailed mineral-scale investigation of oceanic arc suites to quantify assimilation that could otherwise lead to misinterpretation of source composition and subduction processes.
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  • 57
    facet.materialart.
    Unknown
    Elsevier
    In:  Tectonophysics, 405 (1-4). pp. 121-140.
    Publication Date: 2019-04-29
    Description: The Hawaiian–Emperor Seamount chain records the motion of the Pacific Plate relative to the Hawaiian mantle hotspot for ~80 m.y. A notable feature of the chain is the pronounced bend at its middle. This bend had been widely credited to a change in plate motion, but recent research suggests a change in hotspot motion as an alternative. Existing paleomagnetic data from the Emperor Chain suggest that the hotspot moved south during the Late Cretaceous and Early Tertiary, but reached its current latitude by the age of the bend. Thus, data from area of the bend are important for understanding changes in plume latitude. In this study, we analyze the magnetic anomalies of five seamounts (Annei, Daikakuji-W, Daikakuji- E, Abbott, and Colahan) in the region of the bend. These particular seamounts were chosen because they have been recently surveyed to collect multibeam bathymetry and magnetic data positioned with GPS navigation. Inversions of the magnetic and bathymetric data were performed to determine the mean magnetization of each seamount and from these results, paleomagnetic poles and paleolatitudes were calculated. Three of the five seamounts have reversed magnetic polarities (two are normal) and four contain a small volume of magnetic polarity opposite to the main body, consistent with formation during the Early Cenozoic, a time of geomagnetic field reversals. Although magnetization inhomogene ties can degrade the accuracy of paleomagnetic poles calculated from such models, the seamounts give results consistent with one another and with other Pacific paleomagnetic data of approximately the same age. Seamount paleolatitudes range from 13.7 to 23.7, with an average of 19.4F7.4 (2j). These values are indistinguishable from the present-day paleolatitude of the Hawaiian hotspot. Together with other paleomagnetic and geologic evidence, these data imply that the Hawaiian hotspot has moved little in latitude during the past ~45 m.y.
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  • 58
    Publication Date: 2017-11-24
    Description: Like other low-elevation passive margins, the French Atlantic margin is characterized by a gradual topographic transition from the coast to low-altitude interior plains or plateaus. Here we propose a morphostratigraphic analysis to constrain long-term landscape evolution and denudation rates, through the characterization of palaeotopographies and related palaeoweatherings in an area restricted to the southeast Armorican Massif. Two regional-scale palaeosurfaces are recognized: (i) the Infraliassic palaeosurface, the truncated weathering profiles of which are sealed by Liassic marine deposits; (ii) the Eocene palaeosurface, underlain by thick kaolinite- and iron-rich palaeosaprolites and by siliceous duricrusts (silcretes). Quantitative constraints on large-scale tectonic uplift and long-term denudation are obtained from these morphostratigraphic markers. Mean uplift and denudation rates calculated on post-Eocene times range between 0.5 and 2 m.Ma-1. These low values imply high landscape stability of the inland margin over most of the Cenozoic.
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  • 59
    Publication Date: 2020-06-24
    Description: The synthetic production of monodisperse single magnetic domain nanoparticles at ambient temperature is challenging. In nature, magnetosomes--membrane-bound magnetic nanocrystals with unprecedented magnetic properties--can be biomineralized by magnetotactic bacteria. However, these microbes are difficult to handle. Expression of the underlying biosynthetic pathway from these fastidious microorganisms within other organisms could therefore greatly expand their nanotechnological and biomedical applications. So far, this has been hindered by the structural and genetic complexity of the magnetosome organelle and insufficient knowledge of the biosynthetic functions involved. Here, we show that the ability to biomineralize highly ordered magnetic nanostructures can be transferred to a foreign recipient. Expression of a minimal set of genes from the magnetotactic bacterium Magnetospirillum gryphiswaldense resulted in magnetosome biosynthesis within the photosynthetic model organism Rhodospirillum rubrum. Our findings will enable the sustainable production of tailored magnetic nanostructures in biotechnologically relevant hosts and represent a step towards the endogenous magnetization of various organisms by synthetic biology.
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  • 60
    facet.materialart.
    Unknown
    Nature Publishing Group
    In:  Nature Reviews Microbiology, 12 (10). pp. 686-698.
    Publication Date: 2020-06-23
    Description: Marine phytoplankton blooms are annual spring events that sustain active and diverse bloom-associated bacterial populations. Blooms vary considerably in terms of eukaryotic species composition and environmental conditions, but a limited number of heterotrophic bacterial lineages — primarily members of the Flavobacteriia, Alphaproteobacteria and Gammaproteobacteria — dominate these communities. In this Review, we discuss the central role that these bacteria have in transforming phytoplankton-derived organic matter and thus in biogeochemical nutrient cycling. On the basis of selected field and laboratory-based studies of flavobacteria and roseobacters, distinct metabolic strategies are emerging for these archetypal phytoplankton-associated taxa, which provide insights into the underlying mechanisms that dictate their behaviours during blooms.
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  • 61
    facet.materialart.
    Unknown
    Elsevier
    In:  Cretaceous Research, 29 (5-6). pp. 725-753.
    Publication Date: 2018-02-07
    Description: The Cretaceous is a special episode in the history of the Earth named for a unique rock type, chalk. Chalk is similar to modern deep-sea calcareous ooze and its deposition in epicontinental seas occurred as these areas became an integral part of the ocean. The shelf-break fronts that today separate inshore from open-ocean waters cannot have existed during the Late Cretaceous probably because the higher sea level brought the base of the wind-mixed Ekman layer above the sea floor on the continental margins. A second peculiarity of the Cretaceous is its warm equable climate. Tropical and polar temperatures were warmer than today. Meridional and ocean-continent temperature gradients were lower. The warmer climate was a reflection of higher atmospheric levels of greenhouse gasses, CO2 and possibly CH4, reinforced by higher water vapor content in response to the warmer temperatures. Most of the additional energy involved in the meridional heat transport system was transported as latent heat of vaporization of H20 by the atmosphere. Poleward heat transport may have been as much as 1 Petawatt (20%) greater than it is today. C3 plants provided for more efficient energy transport into the interior of the continents. Circulation of the Cretaceous ocean may have been very different from that of today. It is impossible for large areas of the modern ocean to become anoxic, but episodes of local anoxia occurred during the earlier Cretaceous and became regional to global during the middle of the Cretaceous. The present ocean structure depends on constant wind systems, which in turn depend on stability of the atmospheric pressure systems forced by polar ice. During most of the Cretaceous the polar regions were ice free. Without polar ice there were seasonal reversals of the high-latitude atmospheric pressure systems, resulting in disruption of the mid- and high latitude wind systems. Without constant mid-latitude westerly winds, there would be no subtropical and polar fronts in the ocean, no well-developed ocean pycnocline, and no tropical subtropical gyres dominating ocean circulation. Instead the ocean circulation would be accomplished through mesoscale eddies which could carry warmth to the polar regions. Greater knowledge and understanding of the Cretaceous is critical for learning how the climate system operates when one or both polar regions are ice free.
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  • 62
    Publication Date: 2018-04-03
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  • 63
  • 64
    Publication Date: 2018-05-04
    Description: The objective of this study was to investigate the geochemical and hydrogeological effects of earthquakes on fluids in aquifers, particularly in a seismically active area such as Eskisehir (Turkey) where the Thrace–Eskisehir Fault Zone stretches over the region. The study area is also close to the North Anatolian Fault Zone generating devastating earthquakes such as the ones experienced in 1999, reactivating the Thrace–Eskisehir Fault. In the studied area, Rn and CO2 gas concentrations, redox potential, electrical conductivity, pH, water level, water temperature, and the climatic parameters were continuously measured in five stations for about a year. Based on the gathered data from the stations, some ambiguous anomalies in geochemical parameters and Rn concentration of groundwater were observed as precursors several days prior to an earthquake. According to the mid-term observations of this study, well-water level changes were found to be a good indicator for seismic estimations in the area, as it comprises naturally filtered anomalies reflecting only the changes due to earthquakes. Also, the results obtained from this study suggest that both the changes in well-water level and gas–water chemistry need to be interpretated together for more accurate estimations. Valid for the studied area, it can be said that shallow earthquakes with epicentral distances of 〈30 km from the observation stations have more influence on hydrochemical parameters of groundwater and well-water level changes. Although some hydrochemical anomalies were observed in the area, it requires further observations in order to be able to identify them as precursors.
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  • 65
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    Elsevier
    In:  In: Treatise on Geochemistry Vol. 8: The oceans and marine geochemistry. , ed. by Elderfield, H. and Holland, H. D. Elsevier, Amsterdam, pp. 151-189.
    Publication Date: 2017-01-18
    Type: Book chapter , NonPeerReviewed
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  • 66
    Publication Date: 2020-07-30
    Description: The South Aegean Active Volcanic Arc consists of a chain of five volcanic centers, the most active of which is the Santorini Volcano. A local radio-linked seismological network is installed on the island consisting of five permanent and four temporary stations. The temporary stations have been in operation periodically during the period 1994–1996 and two of them were installed on adjacent islands. All stations are equipped with vertical-component short period seismometers. During the period 1994–2002 a significant number of earthquakes has been recorded, with local (duration) magnitudes, MD, up to 5.0 and focal depths varying between 0 km and 35 km. Two clusters of epicenters have been located in the broader area of the Santorini Volcano. The first cluster is located in the caldera of the volcano and is associated with the volcanic process in the Kameni Island. The second (larger) cluster is located near the northern edge of the Santorini Island at the Kolumbo Reef and is connected with the volcanic process at this reef. These clusters can be appropriately associated with the two main tectonic features (faults) in the area under study. The first one (N60°E direction) corresponds to the continuation of the Amorgos fault in the area, while the secondary tectonic line (EW direction) is probably related with the southern edge of a submarine graben, which is located between the islands Amorgos and Santorini. Using the data set of the best-located earthquakes, recorded during the period 1994–2002, an attempt has been made to derive an appropriate equivalent 1 –D earth model for the area under study, in order to improve the accuracy of the determined hypocenters, as well as to obtain a preliminary knowledge of the volcano structure.
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  • 67
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    Nature Publishing Group
    In:  Nature Reviews Immunology, 12 (2). pp. 89-100.
    Publication Date: 2020-06-23
    Description: Vertebrates have evolved a sophisticated adaptive immune system that relies on an almost infinite diversity of antigen receptors that are clonally expressed by specialized immune cells that roam the circulatory system. These immune cells provide vertebrates with extraordinary antigen-specific immune capacity and memory, while minimizing self-reactivity. Plants, however, lack specialized mobile immune cells. Instead, every plant cell is thought to be capable of launching an effective immune response. So how do plants achieve specific, self-tolerant immunity and establish immune memory? Recent developments point towards a multilayered plant innate immune system comprised of self-surveillance, systemic signalling and chromosomal changes that together establish effective immunity.
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  • 68
    Publication Date: 2017-07-18
    Description: To survey hepatitis B virus (HBV) integration in liver cancer genomes, we conducted massively parallel sequencing of 81 HBV-positive and 7 HBV-negative hepatocellular carcinomas (HCCs) and adjacent normal tissues. We found that HBV integration is observed more frequently in the tumors (86.4%) than in adjacent liver tissues (30.7%). Copy-number variations (CNVs) were significantly increased at HBV breakpoint locations where chromosomal instability was likely induced. Approximately 40% of HBV breakpoints within the HBV genome were located within a 1,800-bp region where the viral enhancer, X gene and core gene are located. We also identified recurrent HBV integration events (in ≥4 HCCs) that were validated by RNA sequencing (RNA-seq) and Sanger sequencing at the known and putative cancer-related TERT, MLL4 and CCNE1 genes, which showed upregulated gene expression in tumor versus normal tissue. We also report evidence that suggests that the number of HBV integrations is associated with patient survival.
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  • 69
    Publication Date: 2017-06-20
    Description: The skeletal growth rate of the cold-water coral (CWC) Madrepora oculata Linnaeus, 1758 was measured during 3 months under controlled conditions (at 12 °C in the dark, fed five times a week), using the buoyant weight technique. In order to interpret CWC growth in a wider context, we also measured the skeletal growth rates of three tropical scleractinian species: Stylophora pistillata (Esper, 1797), Turbinaria reniformis (Bernard, 1896) and Galaxea fascicularis (Linnaeus, 1767), likewise maintained under controlled conditions (at 25 °C, 250 μmol photons m− 2 s− 1, either fed five times a week or unfed). The skeletal growth rate of M. oculata was equal to 0.20 ± 0.09% d− 1 (mean ± SD), similar to the growth of unfed and fed nubbins of G. fascicularis (0.14 ± 0.01% d− 1 and 0.36 ± 0.11% d− 1 respectively) despite the large differences in seawater temperatures. Skeletal growth rates of S. pistillata (1.20 ± 0.49% d− 1 to 2.68 ± 0.65% d− 1 unfed/fed) and T. reniformis (0.78 ± 0.34% d− 1 to 0.94 ± 0.14% d− 1 unfed/fed) were significantly higher. These results confirm that the CWC M. oculata can grow at rates that are comparable to those of some tropical corals, despite the lack of autotrophy (lacking zooxanthellae) and the low temperatures of its environment.
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  • 70
    Publication Date: 2017-06-19
    Description: The scleractinian cold-water corals (CWC) Lophelia pertusa and Madrepora oculata represent two major deep-sea reef-forming species that act as key ecosystem engineers over a wide temperature range, extending from the northern Atlantic (ca. 5–9 °C) to the Mediterranean Sea (ca. 11–13 °C). Recent research suggests that environmental parameters, such as food supply, settling substrate availability or aragonite saturation state may represent important precursors controlling habitat suitability for CWC. However, the effect of one principal environmental factor, temperature, on CWC key physiological processes is still unknown. In order to evaluate this effect on calcification, respiration, and dissolved organic carbon (DOC) net flux, colonies of Mediterranean L. pertusa and M. oculata were acclimated in aquaria to three temperatures (12, 9 and 6 °C), by consecutive decrements of 1 month duration. L. pertusa and M. oculata maintained at Mediterranean control conditions (i.e. 12 °C) displayed constant rates, on average respiring 4.8 and 4.0 µmol O2 cm−2 coral surface area d−1, calcifying 22.3 and 12.3 µmol CaCO3 g−1 skeletal dry weight d−1 and net releasing 2.6 and 3.1 µmol DOC cm−2 coral surface area d−1, respectively. Respiration of L. pertusa was not affected by lowered temperatures, while M. oculata respiration declined significantly (by 48%) when temperature decreased to 9 °C and 6 °C relative to controls. L. pertusa calcification at 9 °C was similar to controls, but decreased significantly (by 58%) at 6 °C. For M. oculata, calcification declined by 41% at 9 °C and by 69% at 6 °C. DOC net flux was similar throughout the experiment for both CWC. These findings reveal species-specific physiological responses by CWC within their natural temperature range. L. pertusa shows thermal acclimation in respiration and calcification, while these mechanisms appear largely absent in M. oculata. Conclusively, species-specific thermal acclimation may significantly affect the occurrence and local abundance of cosmopolitan CWC species, consequently influencing their important role in habitat engineering and ecosystem functioning in various thermal environments. Keywords
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  • 71
    Publication Date: 2017-06-19
    Description: Dissolved organic matter, which contains many compounds such as lipids, sugars and amino acids, is an important source of carbon and nitrogen for several symbiotic and asymbiotic tropical coral species. However, there is still no information on its possible uptake by cold-water coral species. In this study, we demonstrated that dissolved organic matter, in the form of dissolved free amino acids (DFAA), is actively absorbed by four cold-water coral species from the Mediterranean Sea. Although the uptake rates observed with 3 µM DFAA concentration were one order of magnitude lower than those observed in tropical species, they corresponded to 12–50% of the daily excreted-nitrogen, and 16–89% of the daily respired-carbon of the cold-water corals. Consequently, DFAA, even at in situ concentrations lower than those tested in this study, can supply a significant amount of carbon and nitrogen to the corals, especially during periods when particulate food is scarce.
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  • 72
    Publication Date: 2017-07-14
    Description: Redox-sensitive trace metals (Mn, Fe, U, Mo, Re), nutrients and terminal metabolic products (NO3-, NH4+, PO43-, total alkalinity) were investigated for the first time in pore waters of Antarctic coastal sediments. The results of this study reveal a high spatial variability in redox conditions in surface sediments from Potter Cove, King George Island, western Antarctic Peninsula. Particularly in the shallower areas of the bay the significant correlation between sulphate depletion and total alkalinity, the inorganic product of terminal metabolism, indicates sulphate reduction to be the major pathway of organic matter mineralisation. In contrast, dissimilatory metal oxide reduction seems to be prevailing in the newly ice-free areas and the deeper troughs, where concentrations of dissolved iron of up to 700 μM were found. We suggest a combination of several factors to be responsible for the domination of metal oxide reduction over sulphate reduction in these areas. These include the increased accumulation of fine-grained material with high amounts of reducible metal oxides, a reduced availability of metabolisable organic matter and an enhanced physical and biological disturbance by bottom water currents, ice scouring and burrowing organisms. Based on modelled iron fluxes we calculate the contribution of the Antarctic shelf to the pool of potentially bioavailable iron (Feb) to be 6.9 × 103 to 790 × 103 t yr-1. Consequently, these shelf sediments would provide an Feb flux of 0.35-39.5 mg m-2 yr-1 (median: 3.8 mg m-2 yr-1) to the Southern Ocean. This contribution is in the same order of magnitude as the flux provided by icebergs and significantly higher than the input by aeolian dust. For this reason suboxic shelf sediments form a key source of iron for the high nutrient-low chlorophyll (HNLC) areas of the Southern Ocean. This source may become even more important in the future due to rising temperatures at the WAP accompanied by enhanced glacier retreat and the accumulation of melt water derived iron-rich material on the shelf.
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  • 73
    Publication Date: 2017-07-14
    Description: Benthic habitat mapping is an important first step towards ecosystem-based management. In a top-down approach, benthic mapping of a semi-enclosed bay in south-eastern Brazil was performed using a combined approach of acoustic RoxAnn survey and benthic samples. An inventory of the benthic macrofauna as well as unsupervised classifications of the acoustic data provided information about sediment patterns and potential areas of ecological importance, and a new zoning scheme is suggested based on the macrofauna analysis. The RoxAnn survey proved suitable to determine sediment characteristics, however, species–environment relationships cannot be revealed by acoustic techniques only. Based on the data presented here, acoustic surveys could become an important tool in future monitoring programmes following the bottom-up approach of seabed classification protocols for an ecosystem-based management to improve existing coastal ecosystem management strategies in Brazil. A combined approach of benthic mapping of Caraguatatuba Bay, Brazil, with recommendations for management practices (PDF Download Available). Available from: https://www.researchgate.net/publication/257423766_A_combined_approach_of_benthic_mapping_of_Caraguatatuba_Bay_Brazil_with_recommendations_for_management_practices [accessed Jun 6, 2017].
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  • 74
    Publication Date: 2017-07-12
    Description: Several lines of evidence have previously been used to suggest that ice retreat after the last glacial maximum (LGM) resulted in regionally-increased levels of volcanic activity. It has been proposed that this increase in volcanism was globally significant, forming a substantial component of the post-glacial rise in atmospheric CO2, and thereby contributing to climatic warming. However, as yet there has been no detailed investigation of activity in glaciated volcanic arcs following the LGM. Arc volcanism accounts for 90% of present-day subaerial volcanic eruptions. It is therefore important to constrain the impact of deglaciation on arc volcanoes, to understand fully the nature and magnitude of global-scale relationships between volcanism and glaciation. The first part of this paper examines the post-glacial explosive eruption history of the Andean southern volcanic zone (SVZ), a typical arc system, with additional data from the Kamchatka and Cascade arcs. In all cases, eruption rates in the early post-glacial period do not exceed those at later times at a statistically significant level. In part, the recognition and quantification of what may be small (i.e. less than a factor of two) increases in eruption rate is hindered by the size of our datasets. These datasets are limited to eruptions larger than 0.1 km3, because deviations from power-law magnitude–frequency relationships indicate strong relative under-sampling at smaller eruption volumes. In the southern SVZ, where ice unloading was greatest, eruption frequency in the early post-glacial period is approximately twice that of the mid post-glacial period (although frequency increases again in the late post-glacial). A comparable pattern occurs in Kamchatka, but is not observed in the Cascade arc. The early post-glacial period also coincides with a small number of very large explosive eruptions from the most active volcanoes in the southern and central SVZ, consistent with enhanced ponding of magma during glaciation and release upon deglaciation. In comparison to non-arc settings, evidence of post-glacial increases in rates of arc volcanism is weak, and there is no need to invoke significantly increased melt production upon ice unloading, as occurred in areas such as Iceland. Non-arc volcanoes may therefore account for a relatively higher proportion of global volcanic emissions in the early post-glacial period than is suggested by the relative contributions of arc and non-arc settings at the present day. The second part of this paper critically examines global eruption records, in an effort to constrain global-scale changes in volcanic output since the LGM. Accurate interpretation of these records relies on correcting both temporal and spatial variability in eruption recording. In particular, very low recording rates, which also vary spatially by over two orders of magnitude, prevent precise, and possibly even accurate, quantitative analysis. For example, if we assume record completeness for the past century, the number of known eruptions (volcanic explosivity index ≥ 2) from some low-latitude regions, such as Indonesia, is approximately 1 in 20,000 (0.005%) for the period 5–20 ka. There is a need for more regional-scale studies of past volcanism in such regions, where current data are extremely sparse. We attempt to correct for recording biases, and suggest a maximum two-fold (but potentially much less) increase in global eruption rates, relative to the present day, between 13 and 7 ka. Although volcanism may have been an important source of CO2 in the early Holocene, it is unlikely to have been a dominant control on changes in atmospheric CO2 after the LGM.
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  • 75
    Publication Date: 2017-06-16
    Description: Climate warming at the end of the last glaciation caused ice caps on Icelandic volcanoes to retreat. Removal of surface ice load is thought to have decreased pressures in the underlying mantle, triggering decompression melting, enhanced magma generation and increased volcanic activity1–3. Present-day climate change could have the same effect, although there may be a time lag of hundreds of years between magma generation and eruption4,5. However, in addition to increased magma generation, pressure changes associated with ice retreat should also alter the capacity for storing magma within the crust. Here we use a numerical model to evaluate the effect of the current decrease in ice load on magma storage in the crust at the Kverkfjöll volcanic system, located partially beneath Iceland’s largest ice cap. We compare the model results with radar and global positioning system measurements of surface displacement and changes in crustal stress between 2007 and 2008, during the intrusion of a deep dyke at Upptyppingar. We find that although the main component of stress recorded during dyke intrusion relates to plate extension, another component of stress is consistent with the stress field caused by the retreating ice cap. We conclude that the retreating ice cap led to enhanced capture of magma within the crust. We suggest that ice-cap retreat can promote magma storage, rather than eruption, at least in the short term.
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  • 76
    Publication Date: 2017-09-22
    Description: Compared with microscopic indices such as biomass, inverted satellite images can reflect cyanobacterial blooms from a macroscopic perspective, can provide planar information for blooms, and can more definitely reflect the occurrence of visible cyanobacterial blooms. We therefore adopted inverted images (from MODIS imagery) to judge whether cyanobacterial blooms had occurred in a water area at a given time. We constructed two probit models for identifying significant environmental factors related to cyanobacterial bloom occurrence and for short-term forecasts of bloom occurrence. The models used the index of cyanobacterial bloom occurrence as the dependent variable and the predicted variable, respectively, and used three categories (water quality, hydrology, and weather) of monitoring variables as the independent variables (or predictive variables). We used the Hill Dagong water area of Lake Tai in China as a case study of the new methods. The results produced by the identification model are consistent with the general conclusions in this research field indicating the validity of the model. The mean relative error of the forecast model is 13.5%, which is close to or lower than that of two previous models. Compared with the previous models, our forecast model also has advantages in terms of spatial and temporal precision. The new models have both practical applicability and the ability to be generalized and can, therefore, be easily adapted for the prevention, control, and prediction of cyanobacterial blooms in other bodies of water.
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  • 77
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    Elsevier
    In:  Journal of Experimental Marine Biology and Ecology, 449 . pp. 85-92.
    Publication Date: 2018-03-15
    Description: Small marine decapods often associatewith other invertebrates in order to gain protection frompredators. However, the factors that influence host choice by symbionts, such as shrimps, are poorly understood but may have important implications for the distribution and abundance of these mesoconsumers. In Hong Kong, the rhynchocinetid shrimp Rhynchocinetes brucei uses two alternative hosts: an urchin (Diadema setosum) and an anemone (Entacmaea quadricolor).We examined the association between R. brucei and its anemone and urchin hosts in the field and laboratory, investigating host choice and host fidelity. Underwater surveys on shallowrocky reefs in Hong Kong revealed that shrimps were rarely found outside refuges, such as crevices and holes, unless they were associated with anemones and urchins. Shrimps were more frequently associated with urchins than with anemones, although anemones were more abundant within the survey area. Host-choice experiments in the laboratory confirmed that, when given a choice, shrimps avoided open areas and associated with anemones, urchins or artificial refuges. Shrimps overwhelmingly chose urchins over artificial refuges, but did not show any clear preference for anemones over refuges. When offered a choice, shrimps displayed fidelity for their original host species (i.e. the host with which they were associated when collected from the field), suggesting that they imprinted upon the host. Host-imprinting may allow symbionts to efficiently relocate their original host species after separation (e.g. following nocturnal foraging trips) thereby, perhaps, reducing the risk of predation. However, host preference by R. brucei was facultative because shrimps would associate with an unfamiliar host when their original host was unavailable. This flexibility may allowshrimps to respond to local variability in host abundance. Host-use patterns and factors influencing the choice between anemone and urchin hosts by a caridean shrimp. Available from: https://www.researchgate.net/publication/257882112_Host-use_patterns_and_factors_influencing_the_choice_between_anemone_and_urchin_hosts_by_a_caridean_shrimp [accessed Oct 06 2017].
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  • 78
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    Elsevier
    In:  Journal of Environmental Radioactivity, 101 (7). pp. 519-520.
    Publication Date: 2018-03-08
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  • 79
    Publication Date: 2018-03-15
    Description: A novel flow injection ion chromatograph (FI-IC) system has been developed to fully automate pretreatment procedures for multi-elemental analysis of trace metals in seawater by inductively coupled plasma mass spectrometer (ICPMS). By combining 10-port, 2 position and 3-way valves in the FI-IC manifold, the system effectively increase sample throughput by simultaneously processing three seawater samples online for: sample loading, injection, buffering, preconcentration, matrix removal, metal elution, and sample collection. Forty-two seawater samples can be continuously processed without any manual handing. Each sample pretreatment takes about 10 min by consuming 25 mL of seawater and producing 5 mL of processed concentrated samples for multi-elemental offline analysis by ICPMS. The offline analysis improve analytical precision and significantly increase total numbers of isotopes determined by ICPMS, which include the metals Al, Cd, Co, Cr, Cu, Fe, Mn, Ni, Pb, Ti, V, and Zn. The blank value and detection limits of trace metals using the system with ICPMS analysis all range from 0.1 to 10 parts per trillion (ppt), except Al, Fe, and Zn. The accuracy of the pretreatment system was validated by measuring open-ocean and coastal reference seawater, NASS-5 and CASS-4. Using the system with ICPMS analysis, we have obtained reliable trace metal concentrations in the water columns of the South China Sea. Possessing the features of full automation, high throughput, low blank, and low reagent volume used, the system automates and simplifies rigorous and complicated pretreatment procedures for multi-elemental analysis of trace metals in seawater and effectively enhances analytical capacity for trace metal analysis in environmental and seawater samples.
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  • 80
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    Nature Publishing Group
    In:  Nature Geoscience, 3 (6). pp. 412-416.
    Publication Date: 2017-12-21
    Description: The elemental stoichiometry of sea water and particulate organic matter is remarkably similar. This observation led Redfield to hypothesize that the oceanic ratio of nitrate to phosphate is controlled by the remineralization of phytoplankton biomass1. The Redfield ratio is used universally to quantitatively link the marine nitrogen and phosphorus cycles in numerous biogeochemical applications2,3,4. Yet, empirical and theoretical studies show that the ratio of nitrogen to phosphorus in phytoplankton varies greatly with taxa5,6 and growth conditions7,8,9. Here we present a dynamic five-box ecosystem model showing that non-Redfield utilization of dissolved nitrogen and phosphorus by non-nitrogen-fixing phytoplankton controls the magnitude and distribution of nitrogen fixation. In our simulations, systems dominated by rapidly growing phytoplankton with low nitrogen to phosphorus uptake ratios reduce the phosphorus available for nitrogen fixation. In contrast, in systems dominated by slow-growing phytoplankton with high nitrogen to phosphorus uptake ratios nitrogen deficits are enhanced, and nitrogen fixation is promoted. We show that estimates of nitrogen fixation are up to fourfold too high when non-Redfield uptake stoichiometries are ignored. We suggest that the relative abundance of fast- and slow-growing phytoplankton controls the amount of new nitrogen added to the ocean.
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  • 81
    Publication Date: 2018-03-07
    Description: As paleoceanographic archives, deep sea coral skeletons offer the potential for high temporal resolution and precise absolute dating, but have not been fully investigated for geochemical reconstructions of past ocean conditions. Here we assess the utility of skeletal P/Ca, Ba/Ca and U/Ca in the deep sea coral D. dianthus as proxies of dissolved phosphate (remineralized at shallow depths), dissolved barium (trace element with silicate-type distribution) and carbonate ion concentrations, respectively. Measurements of these proxies in globally distributed D. dianthus specimens show clear dependence on corresponding seawater properties. Linear regression fits of mean coral Element/Ca ratios against seawater properties yield the equations: P/Cacoral (μmol/mol) = (0.6 ± 0.1) P/Casw(μmol/mol) – (23 ± 18), R2 = 0.6, n = 16 and Ba/Cacoral(μmol/mol) = (1.4 ± 0.3) Ba/Casw(μmol/mol) + (0 ± 2), R2 = 0.6, n = 17; no significant relationship is observed between the residuals of each regression and seawater temperature, salinity, pressure, pH or carbonate ion concentrations, suggesting that these variables were not significant secondary dependencies of these proxies. Four D. dianthus specimens growing at locations with Ωarag ⩽ 0.6 displayed markedly depleted P/Ca compared to the regression based on the remaining samples, a behavior attributed to an undersaturation effect. These corals were excluded from the calibration. Coral U/Ca correlates with seawater carbonate ion: U/Cacoral(μmol/mol) = (−0.016 ± 0.003) (μmol/kg) + (3.2 ± 0.3), R2 = 0.6, n = 17. The residuals of the U/Ca calibration are not significantly related to temperature, salinity, or pressure. Scatter about the linear calibration lines is attributed to imperfect spatial-temporal matches between the selected globally distributed specimens and available water column chemical data, and potentially to unresolved additional effects. The uncertainties of these initial proxy calibration regressions predict that dissolved phosphate could be reconstructed to ±0.4 μmol/kg (for 1.3–1.9 μmol/kg phosphate), and dissolved Ba to ±19 nmol/kg (for 41–82 nmol/kg Basw). Carbonate ion concentration derived from U/Ca has an uncertainty of ±31μmol/kg (for ). The effect of microskeletal variability on P/Ca, Ba/Ca, and U/Ca was also assessed, with emphasis on centers of calcification, Fe–Mn phases, and external contaminants. Overall, the results show strong potential for reconstructing aspects of water mass mixing and biogeochemical processes in intermediate and deep waters using fossil deep-sea corals.
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  • 82
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    Elsevier
    In:  In: Scallops: Biology, Ecology and Aquaculture. Developments in aquaculture and fisheries science, 35 . Elsevier, Amsterdam, pp. 493-520. 2. Ed. ISBN 978-0-444-50482-1
    Publication Date: 2016-12-12
    Type: Book chapter , NonPeerReviewed
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  • 83
    Publication Date: 2017-01-26
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  • 84
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    Elsevier
    In:  Procedia Earth and Planetary Science, 6 . pp. 226-233.
    Publication Date: 2017-02-14
    Description: The Manus back-arc basin host three distinct well known submarine hydrothermal deposits of Vienna Wood, Pacmanus and Onsen sites. The Vienna Wood site is a typical Cu-Zn type of mineralization consisting predominantly of pyrite, marcasite, sphalerite, wurtzite and chalcopyrite. The Pacmanus site is a polymetallic type of mineral deposit consisting of sphalerite, chalcopyrite, bornite, wurtzite, pyrite, marcasite, enargite, tennantite, galena, Pb-As-Sulphosalt, gold, covellite, digenite and chalcocite. The Onsen site is the first deep sea acid sulfate type of mineralisationconsisting ofenargite, covellite, chalcopyrite, pyrite and marcasite. The Papua New Guinea (PNG) Government has granted exploration license to Nautilus Mineral Cooperation to explore for submarin e hydrothermal deposit in the Manus Basin. It has done extensive exploration around the existing hydrothermal depos its of Vienna Wood, Pacmanus and Onsen site. This has resulted in the discoveries of well over twenty hydrothermal deposits (Solwara 1 to Solwara 20). Nautilus Minerals has done resource drilling on Solwara 1 and Solwara 12 deposit due to its polymetallic type of mineralization and its geochemicalsimilarities to the Pacmanus site. From resources drilling, Nautilus Minerals reported an indicated and inferred mineral resource of 1030 kt and 1540 kt respectively for the Solwara 1 project at 2.6% Cu equivalent cut off grade. The PNG government has granted mining lease (ML154) to Nautilus Minerals to mine the Solwara 1 deposit in January 2012. If mining activity commences at the Solwara 1 site then Nautilus needs to address possible environmental impacts of water usage and discharge, water quality, sedimentation and dewatering and preservation of hydrothermal vent communities.
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  • 85
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    Elsevier
    In:  Geochimica et Cosmochimica Acta, 74 (23). pp. 6801-6813.
    Publication Date: 2017-03-09
    Description: Copper and Zn metals are produced in large quantities for different applications. During Cu production, large amounts of Cu and Zn can be released to the environment. Therefore, the surroundings of Cu smelters are frequently metal-polluted. We determined Cu and Zn concentrations and Cu and Zn stable isotope ratios (δ65Cu, δ66Zn) in three soils at distances of 1.1, 3.8, and 5.3 km from a Slovak Cu smelter and in smelter wastes (slag, sludge, ash) to trace sources and transport of Cu and Zn in soils. Stable isotope ratios were measured by multicollector inductively coupled plasma mass spectrometry (MC-ICP-MS) in total digests. Soils were heavily contaminated with concentrations up to 8087 μg g−1 Cu and 2084 μg g−1 Zn in the organic horizons. The δ65Cu values varied little (−0.12‰ to 0.36‰) in soils and most wastes and therefore no source identification was possible. In soils, Cu became isotopically lighter with increasing depth down to 0.4 m, likely because of equilibrium reactions between dissolved and adsorbed Cu species during transport of smelter-derived Cu through the soil. The δ66ZnIRMM values were isotopically lighter in ash (−0.41‰) and organic horizons (−0.85‰ to −0.47‰) than in bedrock (−0.28‰) and slag (0.18‰) likely mainly because of kinetic fractionation during evaporation and thus allowed for separation of smelter-Zn from native Zn in soil. In particular in the organic horizons large variations in δ66Zn values occur, probably caused by biogeochemical fractionation in the soil–plant system. In the mineral horizons, Zn isotopes showed only minor shifts to heavier δ66Zn values with depth mainly because of the mixing of smelter-derived Zn and native Zn in the soils. In contrast to Cu, Zn isotope fractionation between dissolved and adsorbed species was probably only a minor driver in producing the observed variations in δ66Zn values. Our results demonstrate that metal stable isotope ratios may serve as tracer of sources, vertical dislocation, and biogeochemical behavior in contaminated soil.
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  • 86
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    Elsevier
    In:  Earth and Planetary Science Letters, 231 (1-2). pp. 53-72.
    Publication Date: 2017-05-02
    Description: We derive an estimate for the chemical composition of the depleted MORB mantle (DMM), the source reservoir to mid-ocean ridge basalts (MORBs), which represents at least 30% the mass of the whole silicate Earth. A database for the chemical and physical properties of abyssal peridotites has become robust and complete enough to truly access a reference DMM. Using trace element depletion trends from the abyssal peridotites, it is possible to construct a large part of DMM’s trace element pattern. Splicing this information with isotopic constraints (Sr–Nd–Pb–Hf) and canonical ratios (Ce/Pb, Nb/Ta, Nb/U, Ba/Rb, H2O/Ce, CO2/Nb and Cl/K), we can extend abundance estimates to all the incompatible elements including volatile content. The resulting trace element pattern for average DMM constrains parental MORB to be generated by 6% aggregated fractional melting, consistent with recent models for hydrous melting of the mantle [P.D. Asimow, J.E. Dixon, C.H. Langmuir, A hydrous melting and fractionation model for mid-ocean ridge basalts: application to the Mid-Atlantic Ridge near the Azores, Geochem. Geophys. Geosyst. 5 (2004) 10.1029/2003GC000568]. We show that DMM is roughly balanced by the continental crust and better balanced upon inclusion of ocean island basalt source and oceanic crust components. Compared to the primitive mantle, DMM has been depleted by 2–3% melt extraction and has only 15% the radiogenic heat production.
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  • 87
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    Elsevier
    In:  Precambrian Research, 183 (1). pp. 44-49.
    Publication Date: 2020-06-10
    Description: The sensitive high-resolution ion microprobe (SHRIMP) developed at the Australian National University (ANU) was the first of the high-resolution ion microprobes. The impact of this instrument on geochronological research over the last twenty years has been immense. This is particularly so for lunar geochronology where it has opened up avenues of research that were not possible using conventional TIMS techniques. The great advantage of SHRIMP is that it provides a means for determining precise U–Pb isotopic ratios on selected micron-size areas on polished grains of zircon and other U-bearing minerals. One of the first projects undertaken on the newly invented SHRIMP I was an investigation of U–Pb ages of lunar zircon. Using SHRIMP, multiple analyses could be made on areas of individual zircons to test the stability of U–Pb systems in shocked grains. Also, by analysing grains “in situ”, textural relationships between the analysed zircon and the components of the sample breccia could be used in the interpretation of the SHRIMP data. As a result of this research it was realised that most lunar zircons have ages up to 500Ma older than the Imbrium and Serenitatis impacts at ca. 3.9 Ga, demonstrating that the zircons have not been affected by the these impact events although heating and shock effects have profoundly disturbed other dating systems. This has opened the way for research into the early lunar magmatic and bombardment record. For example, recent SHRIMP results have revealed profound differences in the ages of zircons from breccias from the Apollo 14 and Apollo 17 sample sites, raising new questions about the evolution of lunar magmatism. Also, multiple SHRIMP analyses on complex lunar zircons have shown that these grains can record U–Pb disturbance by later impact events. SHRIMP U–Pb age determinations on phosphates in lunar meteorites has identified lunar events not recognised in samples from the Apollo program. SHRIMP-based research on lunar materials is ongoing and, in combination with other chemical and structural evidence, continues to stimulate new ideas on the early evolution of the Moon.
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  • 88
    Publication Date: 2017-07-14
    Description: Fresh volcanic glasses from the extrusive section of the Troodos Ophiolite in Akaki Canyon are tholeiitic and basaltic to dacitic in composition. Compared to normal MORB they have extremely low fractionation corrected Na8, Fe8 and Ti8 and are enriched in fluid-mobile trace elements, including U, Ba, Rb, Sr and Pb, relative to non-fluid mobile elements of similar incompatibility. Trace element compositions of Akaki lavas define an array extending between ‘back-arc lava’-like compositions, and the field defined by Troodos boninites from the upper part of the lava sequence. Troodos lavas were derived from a mantle source that underwent early melt depletion, and later enrichment by both fluids and small degree melts. These processes can explain the unusual negative correlation of Pb/Ce with Zr/Nb and Ba/Nb in Troodos extrusives. Although some Troodos lavas are similar in composition to lavas from back-arc spreading centres, the boninites from the upper parts of the lava pile do not appear to have exact compositional equivalents among lavas from fore-arcs, back-arcs or other tectonic settings where similar rocktypes have been recovered. We suggest that the geochemical evolution inferred for the mantle source of Troodos lavas, together with geological evidence is most consistent with an origin for the Troodos Ophiolite at a spreading centre close to a ridge–trench–trench, or ridge–trench–transform triple junction, where highly depleted, subduction-modified, fluid-enriched mantle wedge material was able to upwell and decompress to shallow depths in a ‘fore-arc’ location. In such a tectonic setting, arc volcanism is captured by the spreading centre, explaining the lack of evidence for subaerial arc magmatism in Troodos. Rapid lateral migration of the triple junction could account for the similar ages of other Tethyan supra-subduction zone ophiolites.
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  • 89
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    Nature Publishing Group
    In:  Nature, 435 (7044). p. 901.
    Publication Date: 2019-11-11
    Description: Scattered groups of these ancient fish may all stem from a single remote population. Coelacanths were discovered in the Comoros archipelago to the northwest of Madagascar in 1952. Since then, these rare, ancient fish have been found to the south off Mozambique, Madagascar and South Africa, and to the north off Kenya and Tanzania — but it was unclear whether these are separate populations or even subspecies. Here we show that the genetic variation between individuals from these different locations is unexpectedly low. Combined with earlier results from submersible and oceanographic observations1, 2, our findings indicate that a separate African metapopulation is unlikely to have existed and that locations distant from the Comoros were probably inhabited relatively recently by either dead-end drifters or founders that originated in the Comoros.
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  • 90
    Publication Date: 2017-06-28
    Description: Numerous methane-emitting bottom features, such as seeps, methane clathrate hydrates (clathrates), and mud volcanoes, have been identified recently in the Black Sea. The fluxes of methane from these sources averaged over large spatial scales are unknown. Here we take advantage of the fact that the Black Sea is a semi-enclosed basin with restricted deep water circulation to establish first-order estimates of basin-wide fluxes of methane from these sources to the water column and atmosphere. First, we measured the natural radiocarbon content of methane (14C–CH4) dissolved in the water column and emitted from seeps. The 14C–CH4 results showed that the dominant source of methane to the water column is emitted from seeps and a smaller source is diagenetically produced in relatively modern sediments. The 14C–CH4 results were then used to partition a basin-wide total methane budget; this analysis estimated the basin-wide flux of methane from seeps and clathrates to the water column to be 3.60 to 4.28 Tg yr− 1. Second, a geochemical box model was used to calculate possible distributions of methane inputs from seeps and clathrates as well as provide additional estimates of the basin-wide flux of methane from seeps and clathrates to the water column (4.95 to 5.65 Tg yr− 1).
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  • 91
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    Elsevier
    In:  Palaeogeography Palaeoclimatology Palaeoecology, 227 (1-3). pp. 31-47.
    Publication Date: 2017-06-30
    Description: Carbonates recovered from anoxic waters between 235 and 1555 m depth in the northwestern Black Sea were analyzed for lipid biomarkers and stable carbon isotopic compositions. In addition, a methane-seep-related microbial mat and a sample of surface sediment recovered from a non-seep site were studied for comparison. High concentrations of strongly 13C-depleted lipids attributed to bacteria and archaea mediating the anaerobic oxidation of methane (AOM) were found in all samples except for the sediment. Differences of the dominant AOM-performing communities between the carbonates indicated by specific lipid patterns appear to be caused by the respective biogeochemical settings. High proportions of ANME-2 consortia are found at sites of assumingly high partial pressures of methane while ANME-1 associations dominate at locations of moderate methane supply. In the sedimentary concretion, a complex mixture of biomarkers for terrestrial and planktonic organisms was found. Different molecular structures along with strong variations in the stable carbon isotopic compositions (δ13C = − 20.2‰ to − 94.3‰) allow for an estimation of the proportions of tetraether-bound biphytanes derived from planktonic Crenarchaeota and methanotrophic Euryarchaeota. Our data imply that the shape of AOM-derived carbonate precipitates in Black Sea environments is crucially influenced by the respective methane supply. Active AOM-driven chimney-like bioherms, similar to those previously observed on the Ukrainian shelf, might also develop in the deep euxinic zone at 1555 m water depths.
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  • 92
    Publication Date: 2018-03-15
    Description: Barnacles of the superfamily Coronuloidea are obligate epibionts of various marine mammals, marine reptiles and large crustaceans. We used five molecular markers: 12S rDNA, 16S rDNA, 18S rDNA, 28S rDNA and Histone 3 to infer phylogenetic relationships among sixteen coronuloids, representing most of the recent genera of barnacles of this superfamily. Our analyses confirm the monophyly of Coronuloidea and that this superfamily and Tetraclitoidea are sister groups. The six-plated Austrobalanus clusters with these two superfamilies. Based on BEAST and ML trees, Austrobalanus is basal and sister to the Coronuloidea, but the NJ tree places Austrobalanus within the Tetraclitoidae, and in the MP tree it is sister to both Coronuloidea and Tetraclitoidae. Hence the position of Austrobalanus remains unresolved. Within the Coronuloidea we identified four clades. Chelonibia occupies a basal position within the Coronuloidea which is in agreement with previous studies. The grouping of the other clades does not conform to previous studies. Divergence time analyses show that some of the time estimates are congruent with the fossil record while some others are older, suggesting the possibility of gaps in the fossil record.
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  • 93
    Publication Date: 2017-07-18
    Description: Several lines of evidence have previously been used to suggest that ice retreat after the last glacial maximum (LGM) resulted in regionally-increased levels of volcanic activity. It has been proposed that this increase in volcanism was globally significant, forming a substantial component of the post-glacial rise in atmospheric CO2, and thereby contributing to climatic warming. However, as yet there has been no detailed investigation of activity in glaciated volcanic arcs following the LGM. Arc volcanism accounts for 90% of present-day subaerial volcanic eruptions. It is therefore important to constrain the impact of deglaciation on arc volcanoes, to understand fully the nature and magnitude of global-scale relationships between volcanism and glaciation. The first part of this paper examines the post-glacial explosive eruption history of the Andean southern volcanic zone (SVZ), a typical arc system, with additional data from the Kamchatka and Cascade arcs. In all cases, eruption rates in the early post-glacial period do not exceed those at later times at a statistically significant level. In part, the recognition and quantification of what may be small (i.e. less than a factor of two) increases in eruption rate is hindered by the size of our datasets. These datasets are limited to eruptions larger than 0.1 km3, because deviations from power-law magnitude–frequency relationships indicate strong relative under-sampling at smaller eruption volumes. In the southern SVZ, where ice unloading was greatest, eruption frequency in the early post-glacial period is approximately twice that of the mid post-glacial period (although frequency increases again in the late post-glacial). A comparable pattern occurs in Kamchatka, but is not observed in the Cascade arc. The early post-glacial period also coincides with a small number of very large explosive eruptions from the most active volcanoes in the southern and central SVZ, consistent with enhanced ponding of magma during glaciation and release upon deglaciation. In comparison to non-arc settings, evidence of post-glacial increases in rates of arc volcanism is weak, and there is no need to invoke significantly increased melt production upon ice unloading, as occurred in areas such as Iceland. Non-arc volcanoes may therefore account for a relatively higher proportion of global volcanic emissions in the early post-glacial period than is suggested by the relative contributions of arc and non-arc settings at the present day. The second part of this paper critically examines global eruption records, in an effort to constrain global-scale changes in volcanic output since the LGM. Accurate interpretation of these records relies on correcting both temporal and spatial variability in eruption recording. In particular, very low recording rates, which also vary spatially by over two orders of magnitude, prevent precise, and possibly even accurate, quantitative analysis. For example, if we assume record completeness for the past century, the number of known eruptions (volcanic explosivity index ≥ 2) from some low-latitude regions, such as Indonesia, is approximately 1 in 20,000 (0.005%) for the period 5–20 ka. There is a need for more regional-scale studies of past volcanism in such regions, where current data are extremely sparse. We attempt to correct for recording biases, and suggest a maximum two-fold (but potentially much less) increase in global eruption rates, relative to the present day, between 13 and 7 ka. Although volcanism may have been an important source of CO2 in the early Holocene, it is unlikely to have been a dominant control on changes in atmospheric CO2 after the LGM.
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  • 94
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    Nature Publishing Group
    In:  Nature Methods, 10 (9). pp. 881-884.
    Publication Date: 2020-06-24
    Description: The exponentially increasing number of sequenced genomes necessitates fast, accurate, universally applicable and automated approaches for the delineation of prokaryotic species. We developed specI (species identification tool; http://www.bork.embl.de/software/specI/), a method to group organisms into species clusters based on 40 universal, single-copy phylogenetic marker genes. Applied to 3,496 prokaryotic genomes, specI identified 1,753 species clusters. Of 314 discrepancies with a widely used taxonomic classification, 〉62% were resolved by literature support.
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  • 95
    Publication Date: 2018-03-15
    Description: The behavioural and physical mechanisms involved in the tactics used by predators to catch their prey have been explored for a wide variety of vertebrate taxa but most studies have considered the viewpoints of predator and prey independently. We tackled this issue using an ecologically relevant predator–prey model: wolf spiders (Pardosa spp.) and wood crickets, Nemobius sylvestris. Crickets are particularly challenging prey to catch because their air-sensing systems enable them to detect small air movements caused by approaching predators. Using a high-speed video camera, we found that freely behaving spiders adopted either a fast or a slow velocity tactic to approach crickets. We then developed a device using a piston to simulate, as faithfully as possible, the spider's attack. The air flow generated by the piston was quantified by particle image velocimetry and then used to test the escape success of crickets at different attack velocities. Cricket escape success was lower for low and high piston velocities, matching the two tactics adopted by the spiders. Based on our results, we propose that the escape probability of prey after a given predator signal can be explained by the distance between the prey and the predator, the velocity of the predator and the strength of the signal. Both methodological and conceptual approaches presented in this study could provide useful methods to understand the biological and physical basis of predatory tactics in other animals.
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  • 96
    Publication Date: 2018-03-08
    Description: Geochemical cycles occurring at the interface between terrestrial and marine groundwaters, in the so-called subterranean estuary (STE), are not well understood for most elements. This is particularly true of the transition metals, many of which have particular ecological relevance as micronutrients or toxicants. To gain a first approximation of trace metal geochemistry in the mixing zone, we examined the distribution of nine dissolved metals (Fe, Mn, Mo, V, Co, Ni, Cu, Pb, and Al) through a shallow STE in Great South Bay, New York, USA. We also performed a simple kinetic and chemical separation of labile and organic-complexed metal species in the STE. Dissolved Mn showed marked subsurface enrichment (up to 755 µM at 15 cm depth) that was suggestive of diagenetic remobilization. Dissolved Fe, however, was higher by more than three orders-of-magnitude in fresh groundwater (90 µM) as compared to marine groundwater (0.02 µM), and pH-mediated removal was evident as slightly acidic fresh groundwater (pH 6.8) mixed with marine groundwater (pH ∼ 8.0). Dissolved Mo, Co, and Ni were primarily cycled with Mn, and highly elevated concentrations relative to bay surface waters (up to 300, 75, and 44 nM, respectively) were observed in the STE. High levels of dissolved Pb (up to 4250 pM) observed in the fresh groundwater were nearly quantitatively removed within the salinity mixing zone, in conjunction with marked reduction of dissolved Al. Dissolved Cu exhibited non-conservative removal throughout the STE, and was correlated with the redox potential of the porewaters. Substantial percentages (〉 15%) of organic-metal species were only observed for Cu and Ni, suggesting that these complexes were not generally very important for metal cycling in the STE. Kinetically labile species were observed for all metals examined except Cu and Pb, and represented an approximately constant proportion (between 10% and 70%) of the total dissolved pool for each metal, indicating equilibrium between labile and non-labile species throughout the mixing zone. The non-conservative behavior observed for all metals examined in this study suggests that reactions occurring in the STE are vastly important to the source/sink function of permeable sediments, and studies seeking to quantify SGD-derived trace metal fluxes must take into account biogeochemical processes occurring in the subterranean estuary.
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  • 97
    Publication Date: 2018-03-08
    Description: Ra isotopes are a powerful tool for quantifying the flux of submarine groundwater discharge (SGD) into the sea. Previous studies of 223Ra and 224Ra mass balances in coastal embayments have shown that the Ra balance is dominated by supply via SGD, exchange with the open ocean and radioactive decay. The current study shows that a single time series over a tidal cycle at the principal inlet to Great South Bay (NY, US) is sufficient to determine the net flux of Ra across the inlet, and also can be used to estimate the decay of short-lived Ra in the bay. Estimates of the net Ra flux obtained from a single tidal time-series by using three different approaches agree with those determined from a more time-consuming survey of Ra within the bay, and may represent a first step of estimating SGD in bays and coastal lagoons.
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  • 98
    Publication Date: 2017-12-04
    Description: Core PRAD 1-2, located on the western flank of the Mid-Adriatic Deep, contains a continuous sediment record extending back to upper MIS-11. The upper part of the record which spans the mid Holocene to MIS 5–4 (the last ca 105,000 years) has been investigated for tephra content. A total of 25 discrete tephra layers were discovered, only one of which was visible in the core sequence. The other 24 are not visible to the naked eye, nor were the majority detected by routine down-core scanning methods. A total of 625 geochemical measurements obtained from individual glass shards using WDS-EPMA enabled 21 of the 25 tephras to be assigned to known volcanic events emanating from the Campanian Province (Campi Flegrei, Somma-Vesuvius and Ischia Island). The results provide an independent basis for establishing an age–depth profile for the upper part of the PRAD 1-2 record. This study demonstrates that the number of non-visible tephra layers can significantly exceed the number of visible layers in some deep marine sequences. Routine testing for the presence of non-visible tephra layers can therefore prove rewarding, leading to the detection of additional isochrons for dating and correlating marine sequences, and for their synchronisation with terrestrial records.
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  • 99
    Publication Date: 2018-01-05
    Description: There have been decades, such as 2000–2009, when the observed globally averaged surface-temperature time series shows little increase or even a slightly negative trend1 (a hiatus period). However, the observed energy imbalance at the top-of-atmosphere for this recent decade indicates that a net energy flux into the climate system of about 1 W m−2 (refs 2, 3) should be producing warming somewhere in the system4,5. Here we analyse twenty-first-century climate-model simulations that maintain a consistent radiative imbalance at the top-of-atmosphere of about 1 W m−2 as observed for the past decade. Eight decades with a slightly negative global mean surface-temperature trend show that the ocean above 300 m takes up significantly less heat whereas the ocean below 300 m takes up significantly more, compared with non-hiatus decades. The model provides a plausible depiction of processes in the climate system causing the hiatus periods, and indicates that a hiatus period is a relatively common climate phenomenon and may be linked to La Niña-like conditions.
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  • 100
    facet.materialart.
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    Elsevier
    In:  Geochimica et Cosmochimica Acta, 74 (13). pp. 3735-3750.
    Publication Date: 2018-02-22
    Description: Calcium isotopes in tissues are thought to be influenced by an individual’s diet, reflecting parameters such as trophic level and dairy consumption, but this has not been carefully assessed. We report the calcium isotope ratios (δ44/42Ca) of modern and archaeological animal and human bone (n = 216). Modern sheep raised at the same location show 0.14 ± 0.08‰ higher δ44/42Ca in females than in males, which we attribute to lactation by the ewes. In the archaeological bone samples the calcium isotope ratios of the herbivorous fauna vary by location. At a single site, the archaeological fauna do not show a trophic level effect. Humans have lower δ44/42Ca than the mean site fauna by 0.22 ± 0.22‰, and the humans have a greater δ44/42Ca range than the animals. No effect of sex or age on the calcium isotope ratios was found, and intra-individual skeletal δ44/42Ca variability is negligible. We rule out dairy consumption as the main cause of the lower human δ44/42Ca, based on results from sites pre-dating animal domestication and dairy availability, and suggest instead that individual physiology and calcium intake may be important in determining bone calcium isotope ratios.
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