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  • Phytoplankton
  • Valparaíso, Chile  (20)
  • Elsevier  (12)
  • Frontiers Media  (9)
  • American Institute of Physics (AIP)
Collection
Keywords
Years
  • 1
    Publication Date: 2021-05-19
    Description: El objetivo de esta investigación fue caracterizar y evaluar el proceso de reclutamiento del recurso anchoveta en la zona norte del país durante el período correspondiente a 1997-1998.
    Description: The objective of this research was characterize. and evaluate the process of resource reclutamienito anchovy in the north of the country during the period 1998-1999.
    Description: Unpublished
    Keywords: Pelagic fisheries ; Acoustic data ; Biomass ; Zooplankton ; Phytoplankton ; Trap fishing ; Landing statistics ; Recruitment ; Spawning ; Trawling ; Age determination ; Size-at-age ; Longlining ; Strangomera bentincki ; Length-weight relationships ; Salinity
    Repository Name: AquaDocs
    Type: Report , Refereed , Article
    Format: 201pp. & Figuras
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  • 2
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    Instituto de Fomento Pesquero | Valparaíso, Chile
    Publication Date: 2021-05-19
    Description: El objetivo de la investigación es diagnosticar el estado del recurso camarón nailon y estimar la captura total permisible para el año 2008 en el área comprendida entre la II y la VIII región
    Description: The aim of researcher to diagnose the state of the resource and shrimps permisible para estimating total catch in 2008 in the area between the II and VIII region
    Description: Published
    Keywords: Benthic environment ; Biomass ; Phytoplankton ; Trap fishing ; Landing statistics ; Recruitment ; Spawning ; Stock assessment ; Trawling ; Longlining ; Age determination ; Size-at-age ; Length-weight relationships ; Salinity ; Heterocarpus reedi
    Repository Name: AquaDocs
    Type: Report , Non Refereed
    Format: 32pp.& Anexo
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  • 3
    Publication Date: 2021-05-19
    Description: Esta investigación pretende caracterizar el ciclo anual de la pesquería de peces pelágicos centro su durante la temporada de pesca comercial 1997, con el propósito de disponer de información a actualizada y oportuna para la administración de las pesquerías.
    Description: This research aims to characterize the annual cycle of the pelagic fishery during the run up to the center of commercial fishing, 1997, in order to have current and timely information for managing fisheries.
    Description: Unpublished
    Keywords: Pelagic fisheries ; Acoustic data ; Biomass ; Zooplankton ; Phytoplankton ; Trap fishing ; Landing statistics ; Recruitment ; Spawning ; Stock assessment ; Trawling ; Longlining ; Age determination ; Size-at-age ; Length-weight relationships ; Salinity ; Strangomera bentincki ; Engraulis ringens
    Repository Name: AquaDocs
    Type: Report , Refereed , Article
    Format: 61pp. & Figuras
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  • 4
    Publication Date: 2021-05-19
    Description: Se realizó la evaluación de stock del recurso camarón nailon, a partir de 2 modelos de dinámica poblacional: un modelo edad-estructurado, con datos en tallas, el cual no había sido utilizado por IFOP para la evaluación de este recurso y el modelo talla-estructurado, el cual ha sido utilizado en las evaluaciones indirectas de camarón nailon por casi una década. Los modelos fueron ajustados considerando la existencia de 2 zonas de pesca independientes: zona centro-norte (II-IV Región) y zona centro-sur (V-VIII Región).
    Description: Assessment was made of the resource stock shrimps, from 2 models of population dynamics: an age-structured model, with data sizes, which had not been used by FIFG for the evaluation of this resource and model-size structured, which has been used for indirect assessment of shrimps for nearly a decade. The models were adjusted considering the existence of 2 separate fishing zones: north-central (Region II-IV) and central-south (V-VIII Region).
    Description: Unpublished
    Keywords: Benthic environment ; Biomass ; Phytoplankton ; Bathymetric data ; Trap fishing ; Landing statistics ; Recruitment ; Spawning ; Stock assessment ; Trawling ; Longlining ; Age determination ; Size-at-age ; Length-weight relationships ; Salinity ; Heterocarpus reedi
    Repository Name: AquaDocs
    Type: Report , Non Refereed
    Format: 62pp.
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  • 5
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    Instituto de Fomento Pesquero | Valparaíso, Chile
    Publication Date: 2021-05-19
    Description: La pesquería de pez espada se desarrolla en Chile desde inicios de siglo, sin embargo sólo se tienen registros de desembarque desde 1938. En 1987 la pesquería tradicional del pez espada comenzó un acelerado proceso de desarrollo junto con un proceso de innovación tecnológica en la flota artesanal, con la incorporación de redes de enmalle y el surgimiento de una flota industrial que utiliza el palangre como arte de pesca
    Description: The swordfish fishery takes place in Chile since the beginning of the century, however they only have records of landing since 1938. In 1987 the traditional swordfish fishery began an accelerated development process with a process of technological innovation in the artisanal fleet, with the addition of gillnets and the emergence of an industrial fleet using the longline fishing gear as
    Description: Published
    Keywords: Pelagic fisheries ; Acoustic data ; Biomass ; Zooplankton ; Phytoplankton ; Trap fishing ; Landing statistics ; Recruitment ; Spawning ; Stock assessment ; Trawling ; Longlining ; Age determination ; Size-at-age ; Length-weight relationships ; Salinity ; Bathymetric data ; Strangomera bentincki ; Engraulis ringens
    Repository Name: AquaDocs
    Type: Report , Non Refereed
    Format: 32pp. & Tablas
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  • 6
    Publication Date: 2021-05-19
    Description: El presente informe tiene como objetivo cuantificar mediante la aplicación del método hidroacústico los recursos pelágicos sardina común y anchoveta, evaluar las condiciones bio-oceanográficas asociadas, en el área marítima circunscrita a las primeras 50 mn de la costa correspondientes al litoral de la V a VIII regiones.
    Description: This report aims to quantify the method by applying hydroacoustic the pelagic sardine and ancovy, assess bio-oceanographic conditions associated in the sea area limited to the first 50 nm of the coast for the coast of the V-VI II regions.
    Description: Unpublished
    Keywords: Pelagic fisheries ; Acoustic data ; Biomass ; Trap fishing ; Landing statistics ; Spawning ; Trawling ; Longlining ; Age determination ; Size-at-age ; Length-weight relationships ; Salinity ; Stock assessment ; Zooplankton ; Phytoplankton ; Strangomera bentincki ; Engraulis ringens
    Repository Name: AquaDocs
    Type: Report , Refereed , Article
    Format: .105pp. & Figuras
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  • 7
    Publication Date: 2021-05-19
    Description: El presente informe tiene como objetivo realizar un seguimiento de la evolución del proceso de reclutamiento de la anchoveta en el área de la pesquería pelágica zona norte, antes y durante la veda que protege la incorporación masiva de los ejemplares juveniles a la pesquería.
    Description: This report aims to track the evolution of the process of recruitment of anchovy in the area of the pelagic fishery north, before and during the closure that protects the massive incorporation of juveniles to the fishery copies.
    Description: Unpublished
    Keywords: Pelagic fisheries ; Biomass ; Trap fishing ; Landing statistics ; Recruitment ; Spawning ; Stock assessment ; Trawling ; Longlining ; Age determination ; Size-at-age ; Length-weight relationships ; Phytoplankton ; Engraulis ringens
    Repository Name: AquaDocs
    Type: Report , Refereed , Article
    Format: 21pp. & Anexos
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  • 8
    Publication Date: 2021-05-19
    Description: El documento presenta los resultados de la evaluación de la biomasa y distribución espacial de la anchoveta y la fracción reclutas ,mediante técnicas acústicas y las condiciones oceanográficas asociadas a este proceso.
    Description: The document presents the results of the assessment of biomass and spatial distribution of an chovy and recruits fraction by acoustic techniques and oceanographic conditions associated with this process.
    Description: Unpublished
    Keywords: Pelagic fisheries ; Acoustic data ; Biomass ; Trap fishing ; Spawning ; Trawling ; Age determination ; Size-at-age ; Length-weight relationships ; Salinity ; Stock assessment ; Zooplankton ; Phytoplankton ; Strangomera bentincki ; Engraulis ringens
    Repository Name: AquaDocs
    Type: Report , Refereed , Article
    Format: 105pp. & Figuras
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  • 9
    Publication Date: 2021-05-19
    Description: El presente informe tiene como objetivo realizar un seguimiento de la evolución del proceso de reclutamiento de la anchoveta en el área de la pesquería pelágica zona norte, antes y durante la veda que protege la incorporación masiva de los ejemplares juveniles a la pesquería.
    Description: This report aims to track the evolution of the recruitment process of anchovy in the area of the northern pelagic fishery before and during the closed season to protect the massive incorporation of the juveniles to the fishery.
    Description: Published
    Keywords: Pelagic fisheries ; Biomass ; Zooplankton ; Phytoplankton ; Trap fishing ; Landing statistics ; Recruitment ; Spawning ; Stock assessment ; Trawling ; Longlining ; Age determination ; Size-at-age ; Length-weight relationships ; Engraulis ringens
    Repository Name: AquaDocs
    Type: Report , Non Refereed
    Format: 19pp.
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  • 10
    Publication Date: 2021-05-19
    Description: El objetivo de la investigación es diagnosticar el estado del recurso camarón nailon y estimar la captura total permisible para el año 2006 en el área comprendida entre la II y la VIII región.
    Description: The aim of researcher to diagnose the state of the resource and shrimps permisible for estimating total catch in 2006 in the area between the II and VIII region.
    Description: Unpublished
    Keywords: Benthic environment ; Biomass ; Phytoplankton ; Bathymetric data ; Trap fishing ; Landing statistics ; Recruitment ; Spawning ; Stock assessment ; Trawling ; Longlining ; Age determination ; Size-at-age ; Length-weight relationships ; Salinity
    Repository Name: AquaDocs
    Type: Report , Non-Refereed , Article
    Format: 32pp. & Anexo
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  • 11
    Publication Date: 2021-05-19
    Description: Se entregan los resultados de la evaluación acústica de la biomasa abundante por talla y distribución espacial de la anchoveta; oferta ambiental de alimento y las condiciones oceanográficas físicas asociadas en el período de reclutamiento de marzo del año 2007 entre Punta Grande y Los Vilos
    Description: This paper gives the results of the acoustic evaluation of abundant biomass size and spatial distribution of anchovy, environmental supply of food and associated physical oceanographic conditions in the recruitment period of March 2007 between Punta Grande and Los Vilos
    Description: Published
    Keywords: Pelagic fisheries ; Biomass ; Phytoplankton ; Trap fishing ; Landing statistics ; Recruitment ; Spawning ; Stock assessment ; Trawling ; Longlining ; Age determination ; Size-at-age ; Length-weight relationships ; Bathymetric data ; Trachurus murphyi ; Engraulis ringens ; ISE, Chile, Atacama, Chañaral de Aceituno
    Repository Name: AquaDocs
    Type: Report , Non Refereed
    Format: 191pp. & Anexos
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  • 12
    Publication Date: 2021-05-19
    Description: El objetivo de la investigación es estimar la biomasa y abundancia del recurso camarón nailon, en el litoral comprendido entre la II y la VIII regiones, a través de una evaluación directa con el método de área barrida.
    Description: The aim of researcher is to estimate the biomass and abundance of shrimps resort on the coast between the regions II and VIII, through direct assessment with the swept area method.
    Description: Unpublished
    Keywords: Benthic environment ; Phytoplankton ; Biomass ; Bathymetric data ; Trap fishing ; Landing statistics ; Recruitment ; Spawning ; Stock assessment ; Trawling ; Longlining ; Age determination ; Size-at-age ; Length-weight relationships ; Salinity
    Repository Name: AquaDocs
    Type: Report , Non-Refereed , Article
    Format: 275pp.
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  • 13
    Publication Date: 2021-05-19
    Description: Se presentan los resultados de la evaluación acústica de la biomasa, abundancia y distribución espacial; oferta ambiental de alimento y las condiciones oceanográficas físicas asociadas a la anchoveta en el período de reclutamiento entre la I y II regiones del año 1996.
    Description: We present the results of the hydroacoustic evaluation of biomass, spatial distribution, environmental food supply and phyusical oceanographic conditions associated with anchoveta during the recruitment period 1996, between regions I and II.
    Description: Unpublished
    Keywords: Pelagic fisheries ; Biomass ; Trap fishing ; Landing statistics ; Recruitment ; Spawning ; Stock assessment ; Trawling ; Longlining ; Age determination ; Size-at-age ; Length-weight relationships ; Zooplankton ; Phytoplankton ; Engraulis ringens
    Repository Name: AquaDocs
    Type: Report , Refereed , Article
    Format: 126pp.& Figuras
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  • 14
    Publication Date: 2021-05-19
    Description: Se presentan los resultados de la evaluación acústica de la biomasa, abundancia y distribución espacial; oferta ambiental de alimento y las condiciones oceanográficas físicas asociadas a la anchoveta en el período de reclutamiento entre la I y II regiones del año 2007
    Description: We present the results of the hydroacoustic evaluation of biomass, spatial distribution, environmental food supply and phyusical oceanographic conditions associated with anchoveta during the recruitment period 2007, between regions I and II.
    Description: Published
    Keywords: Pelagic fisheries ; Biomass ; Phytoplankton ; Trap fishing ; Landing statistics ; Recruitment ; Spawning ; Stock assessment ; Trawling ; Longlining ; Age determination ; Size-at-age ; Length-weight relationships ; Bathymetric data ; Engraulis ringens
    Repository Name: AquaDocs
    Type: Report , Non Refereed
    Format: 236pp.& Figuras
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  • 15
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    Instituto de Fomento Pesquero | Valparaíso, Chile
    Publication Date: 2021-05-19
    Description: La pesquería de pez espada se desarrolla en Chile desde inicios de siglo, sin embargo sólo se tienen registros de desembarque desde 1938. En 1987 la pesquería tradicional del pez espada comenzó un acelerado proceso de desarrollo junto con un proceso de innovación tecnológica en la flota artesanal, con la incorporación de redes de enmalle y el surgimiento de una flota industrial que utiliza el palangre como arte. de pesca
    Description: The swordfish fishery takes place in Chile since the beginning of the century, howe ver they only have records of landing since 1938. In 1987 the traditional swordfish fishery began an accelerated development process with a process of technological innovation in the artisanal fleet, with the addition of gillnets and the emergence of an industrial fleet using the longline fishing gear as.
    Description: Unpublished
    Keywords: Pelagic fisheries ; Acoustic data ; Biomass ; Zooplankton ; Phytoplankton ; Trap fishing ; Landing statistics ; Recruitment ; Spawning ; Stock assessment ; Trawling ; Longlining ; Age determination ; Size-at-age ; Length-weight relationships ; Salinity ; Bathymetric data ; Strangomera bentincki ; Engraulis ringens
    Repository Name: AquaDocs
    Type: Report , Non Refereed
    Format: 32pp. & Tablas
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  • 16
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    Instituto de Fomento Pesquero | Valparaíso, Chile
    Publication Date: 2021-05-19
    Description: La pesquería de pez espada se desarrolla en Chile desde inicios de siglo, sin embargo sólo se tienen registros de desembarque desde 1938. En 1987 la pesquería tradicional del pez espada comenzó un acelerado proceso de desarrollo junto con un proceso de innovación tecnológica en la flota artesanal, con la incorporación de redes de enmalle y el surgimiento de una flota industrial que utiliza el palangre como arte. de pesca.
    Description: The swordfish fishery takes place in Chile since the beginning of the century, howe ver they only have records of landing since 1938. In 1987 the traditional swordf ish fishery began an accelerated development process with a process of technological innovation in the artisanal fleet, with the addition of gillnets and the emergence of an industrial fleet using the longline fishing gear as.
    Description: Unpublished
    Keywords: Pelagic fisheries ; Acoustic data ; Biomass ; Zooplankton ; Phytoplankton ; Trap fishing ; Landing statistics ; Recruitment ; Spawning ; Stock assessment ; Trawling ; Longlining ; Age determination ; Size-at-age ; Length-weight relationships
    Repository Name: AquaDocs
    Type: Report , Non Refereed
    Format: 32pp.
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  • 17
    Publication Date: 2021-05-19
    Description: El presente informe tiene como objetivo realizar un seguimiento de la evolución del proceso de reclutamiento de la anchoveta en el área de la pesquería pelágica zona norte, antes y durante la veda que protege la incorporación masiva de los ejemplares juveniles a la pesquería.
    Description: Unpublished
    Keywords: Pelagic fisheries ; Biomass ; Trap fishing ; Landing statistics ; Recruitment ; Spawning ; Stock assessment ; Trawling ; Longlining ; Age determination ; Size-at-age ; Length-weight relationships ; Phytoplankton ; Engraulis ringens
    Repository Name: AquaDocs
    Type: Report , Refereed , Article
    Format: 21pp. & Tablas
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  • 18
    Publication Date: 2021-05-19
    Description: El objetivo de la investigación es estimar la biomasa y abundancia del recurso camarón nailon, en el litoral comprendido entre la II y la VIII regiones, a través de una evaluación directa con el método de área barrida.
    Description: The aim of researcher is to estimate the biomass and abund ance of shrimps resort on the coast between the regions II and VIII, through direct assessment with the swept area method.
    Description: Unpublished
    Keywords: Benthic environment ; Phytoplankton ; Biomass ; Bathymetric data ; Trap fishing ; Landing statistics ; Recruitment ; Spawning ; Stock assessment ; Trawling ; Longlining ; Age determination ; Size-at-age ; Length-weight relationships ; Salinity
    Repository Name: AquaDocs
    Type: Report , Non-Refereed , Article
    Format: 275pp.
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  • 19
    Publication Date: 2021-05-19
    Description: Se entregan los resultados de la evaluación de biomasa, abundancia de talla-edad y distribución espacial de la anchoveta y sardina común entre la V y norte de la X regiones mediante el método hidroacústico, en dos cruceros realizados en enero y mayo del año 2007 correspondientes al período de reclutamiento en la zona centro-sur. También se entregan la hidrografía y oferta ambiental de alimento, medidas durante enero de 2007
    Description: The results of the evaluation of biomass, abundance of age-length and spatial distribution of anchovy and sardine between V and northern regions X by hydroacoustic method are given in two cruises in January and May 2007 corresponding the recruitment period in the south-central area. Hydrography and environmental supply of food, measures are also given in January 2007
    Description: Published
    Keywords: Pelagic fisheries ; Acoustic data ; Biomass ; Zooplankton ; Phytoplankton ; Trap fishing ; Landing statistics ; Recruitment ; Spawning ; Stock assessment ; Trawling ; Longlining age determination ; Size-at-age ; Salinity ; Strangomera bentincki ; Engraulis ringens
    Repository Name: AquaDocs
    Type: Report , Non Refereed
    Format: 166pp. & Figuras
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  • 20
    Publication Date: 2021-05-19
    Description: El objetivo de la investigación es diagnosticar el estado del recurso camarón nailon y estimar la captura total permisible para el año 2005 en el área comprendida entre la II y la VIII región.
    Description: The aim of researcher to diagnose the state of the resource and shrimps permisiblepara estimating total catch to 2005 in the area between the II and VIII region.
    Description: Unpublished
    Keywords: Benthic environment ; Stock assessment ; Biomass ; Phytoplankton ; Bathymetric data ; Trap fishing ; Landing statistics ; Recruitment ; Spawning ; Trawling ; Longlining ; Age determination ; Size-at-age ; Length-weight relationships ; Salinity
    Repository Name: AquaDocs
    Type: Report , Non-Refereed , Article
    Format: 67pp. & Anexos.
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  • 21
    Publication Date: 2022-05-25
    Description: © The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Remote Sensing of Environment 135 (2013): 77-91, doi:10.1016/j.rse.2013.03.025.
    Description: Photosynthetic production of organic matter by microscopic oceanic phytoplankton fuels ocean ecosystems and contributes roughly half of the Earth's net primary production. For 13 years, the Sea-viewing Wide Field-of-view Sensor (SeaWiFS) mission provided the first consistent, synoptic observations of global ocean ecosystems. Changes in the surface chlorophyll concentration, the primary biological property retrieved from SeaWiFS, have traditionally been used as a metric for phytoplankton abundance and its distribution largely reflects patterns in vertical nutrient transport. On regional to global scales, chlorophyll concentrations covary with sea surface temperature (SST) because SST changes reflect light and nutrient conditions. However, the ocean may be too complex to be well characterized using a single index such as the chlorophyll concentration. A semi-analytical bio-optical algorithm is used to help interpret regional to global SeaWiFS chlorophyll observations from using three independent, well-validated ocean color data products; the chlorophyll a concentration, absorption by CDM and particulate backscattering. First, we show that observed long-term, global-scale trends in standard chlorophyll retrievals are likely compromised by coincident changes in CDM. Second, we partition the chlorophyll signal into a component due to phytoplankton biomass changes and a component caused by physiological adjustments in intracellular chlorophyll concentrations to changes in mixed layer light levels. We show that biomass changes dominate chlorophyll signals for the high latitude seas and where persistent vertical upwelling is known to occur, while physiological processes dominate chlorophyll variability over much of the tropical and subtropical oceans. The SeaWiFS data set demonstrates complexity in the interpretation of changes in regional to global phytoplankton distributions and illustrates limitations for the assessment of phytoplankton dynamics using chlorophyll retrievals alone.
    Description: The authors would like to acknowledge the NASA Ocean Biology and Biogeochemistry program for its long-term support of satellite ocean color research and the Orbital Sciences Corporation and GeoEye who were responsible for the launch, satellite integration and on-orbit management the SeaWiFS mission.
    Keywords: Ocean color ; SeaWiFS ; Phytoplankton ; Colored dissolved organic matter ; Decadal trends
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: application/pdf
    Format: application/msword
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  • 22
    Publication Date: 2022-05-25
    Description: © The Author(s), 2015. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Deep Sea Research Part II: Topical Studies in Oceanography 118 (2015): 122-135, doi:10.1016/j.dsr2.2015.02.008.
    Description: A coupled biophysical model is used to examine the impact of changes in sea ice and snow cover and nutrient availability on the formation of massive under-ice phytoplankton blooms (MUPBs) in the Chukchi Sea of the Arctic Ocean over the period 1988–2013. The model is able to reproduce the basic features of the ICESCAPE (Impacts of Climate on EcoSystems and Chemistry of the Arctic Pacific Environment) observed MUPB during July 2011. The simulated MUPBs occur every year during 1988–2013, mainly in between mid-June and mid-July. While the simulated under-ice blooms of moderate magnitude are widespread in the Chukchi Sea, MUPBs are less so. On average, the area fraction of MUPBs in the ice-covered areas of the Chukchi Sea during June and July is about 8%, which has been increasing at a rate of 2% yr–1 over 1988–2013. The simulated increase in the area fraction as well as primary productivity and chlorophyll a biomass is linked to an increase in light availability, in response to a decrease in sea ice and snow cover, and an increase in nutrient availability in the upper 100 m of the ocean, in conjunction with an intensification of ocean circulation. Simulated MUPBs are temporally sporadic and spatially patchy because of strong spatiotemporal variations of light and nutrient availability. However, as observed during ICESCAPE, there is a high likelihood that MUPBs may form at the shelf break, where the model simulates enhanced nutrient concentration that is seldom depleted between mid-June and mid-July because of generally robust shelf-break upwelling and other dynamic ocean processes. The occurrence of MUPBs at the shelf break is more frequent in the past decade than in the earlier period because of elevated light availability there. It may be even more frequent in the future if the sea ice and snow cover continues to decline such that light is more available at the shelf break to further boost the formation of MUPBs there.
    Description: This work is supported by the NASA Cryosphere Program and Climate and Biological Response Program and the NSF Office of Polar Programs (Grant Nos. NNX12AB31G; NNX11AO91G; ARC-0901987).
    Keywords: Arctic Ocean ; Chukchi Sea ; Phytoplankton ; Blooms ; Sea ice ; Snow depth ; Light availability ; Nutrient availability
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 23
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Remote Sensing of Environment 217 (2018): 126-143, doi:10.1016/j.rse.2018.08.010.
    Description: Diatoms dominate global silica production and export production in the ocean; they form the base of productive food webs and fisheries. Thus, a remote sensing algorithm to identify diatoms has great potential to describe ecological and biogeochemical trends and fluctuations in the surface ocean. Despite the importance of detecting diatoms from remote sensing and the demand for reliable methods of diatom identification, there has not been a systematic evaluation of algorithms that are being applied to this end. The efficacy of these models remains difficult to constrain in part due to limited datasets for validation. In this study, we test a bio-optical algorithm developed by Sathyendranath et al. (2004) to identify diatom dominance from the relationship between ratios of remote sensing reflectance and chlorophyll concentration. We evaluate and refine the original model with data collected at the Martha's Vineyard Coastal Observatory (MVCO), a near-shore location on the New England shelf. We then validated the refined model with data collected in Harpswell Sound, Maine, a site with greater optical complexity than MVCO. At both sites, despite relatively large changes in diatom fraction (0.8–82% of chlorophyll concentration), the magnitude of variability in optical properties due to the dominance or non-dominance of diatoms is less than the variability induced by other absorbing and scattering constituents of the water. While the original model performance was improved through successive re-parameterizations and re-formulations of the absorption and backscattering coefficients, we show that even a model originally parameterized for the Northwest Atlantic and re-parameterized for sites such as MVCO and Harpswell Sound performs poorly in discriminating diatom-dominance from optical properties.
    Description: This work was supported by: a Woods Hole Oceanographic Institution Summer Student Fellowship (NSF REU award #1156952) and a Bowdoin College Grua/O'Connell Research Award to SJK; grants to HMS from NASA (Ocean Biology and Biogeochemistry program and Biodiversity and Ecological Forecasting program), NSF (Ocean Sciences), the Gordon and Betty Moore Foundation, the Simons Foundation, and NOAA through the Cooperative Institute for the North Atlantic Region (CINAR) under Cooperative Agreement NA14OAR4320158; and grants to CSR from NASA (Ocean Biology and Biogeochemistry program).
    Keywords: Phytoplankton ; Community structure ; Ocean color ; Diatoms
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 24
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Frontiers in Marine Science 5 (2018): 362, doi:10.3389/fmars.2018.00362.
    Description: Major changes to Arctic marine ecosystems have resulted in longer growing seasons with increased phytoplankton production over larger areas. In the Chukchi Sea, the high productivity fuels intense benthic denitrification creating a nitrogen (N) deficit that is transported through the Arctic to the Atlantic Ocean, where it likely fuels N fixation. Given the rapid pace of environmental change and the potentially globally significant N deficit, we conducted experiments aimed at understanding phytoplankton and microbial N utilization in the Chukchi Sea. Ship-board experiments tested the effect of nitrate (NO3-) additions on both phytoplankton and heterotrophic prokaryote abundance, community composition, photophysiology, carbon fixation and NO3- uptake rates. Results support the critical role of NO3- in limiting summer phytoplankton communities to small cells with low production rates. NO3- additions increased particulate concentrations, abundance of large diatoms, and rates of carbon fixation and NO3- uptake by cells 〉1 μm. Increases in the quantum yield and electron turnover rate of photosystem II in +NO3- treatments suggested that phytoplankton in the ambient dissolved N environment were N starved and unable to build new, or repair damaged, reaction centers. While some increases in heterotrophic prokaryote abundance and production were noted with NO3- amendments, phytoplankton competition or grazers likely dampened these responses. Trends toward a warmer more stratified Chukchi Sea will likely enhance summer oligotrophic conditions and further N starve Chukchi Sea phytoplankton communities.
    Description: Fieldwork and analysis for the ICESCAPE program was supported by Ocean Biology and Biogeochemistry Program of the National Aeronautic and Space Administration under Grant No. NNX10AF42G to KA.
    Keywords: Phytoplankton ; Nitrogen ; Chukchi Sea ; Nitrate ; Nutrient limitation
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  • 25
    Publication Date: 2022-05-25
    Description: © The Author(s), 2015. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Frontiers in Microbiology 5 (2015): 794, doi:10.3389/fmicb.2014.00794.
    Description: Atmospheric deposition is a major source of trace metals in marine surface waters and supplies vital micronutrients to phytoplankton, yet measured aerosol trace metal solubility values are operationally defined, and there are relatively few multi-element studies on aerosol-metal solubility in seawater. Here we measure the solubility of aluminum (Al), cadmium (Cd), cobalt (Co), copper (Cu), iron (Fe), manganese (Mn), nickel (Ni), lead (Pb), and zinc (Zn) from natural aerosol samples in seawater over a 7 days period to (1) evaluate the role of extraction time in trace metal dissolution behavior and (2) explore how the individual dissolution patterns could influence biota. Dissolution behavior occurs over a continuum ranging from rapid dissolution, in which the majority of soluble metal dissolved immediately upon seawater exposure (Cd and Co in our samples), to gradual dissolution, where metals dissolved slowly over time (Zn, Mn, Cu, and Al in our samples). Additionally, dissolution affected by interactions with particles was observed in which a decline in soluble metal concentration over time occurred (Fe and Pb in our samples). Natural variability in aerosol chemistry between samples can cause metals to display different dissolution kinetics in different samples, and this was particularly evident for Ni, for which samples showed a broad range of dissolution rates. The elemental molar ratio of metals in the bulk aerosols was 23,189Fe: 22,651Al: 445Mn: 348Zn: 71Cu: 48Ni: 23Pb: 9Co: 1Cd, whereas the seawater soluble molar ratio after 7 days of leaching was 11Fe: 620Al: 205Mn: 240Zn: 20Cu: 14Ni: 9Pb: 2Co: 1Cd. The different kinetics and ratios of aerosol metal dissolution have implications for phytoplankton nutrition, and highlight the need for unified extraction protocols that simulate aerosol metal dissolution in the surface ocean.
    Description: This work was supported by NSF-OCE grant 0850467 to Adina Paytan, NSF-OCE grant 1233261 to Mak A. Saito, and NATO Science for Peace Grant to Adina Paytan and Anton F. Post (SfP 982161). Katherine R. M. Mackey was supported by a National Science Foundation Postdoctoral Research Fellowship in Biology (Grant No. NSF 1103575) and Chia-Te Chien by an international graduate student fellowship from the ministry of education, Taiwan.
    Keywords: Aerosols ; Atmospheric deposition ; Phytoplankton ; Trace metals ; Ligands
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  • 26
    Publication Date: 2022-05-26
    Description: © The Author(s), 2012. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Frontiers in Microbiology 3 (2012): 385, doi:10.3389/fmicb.2012.00385.
    Description: Genes that are constitutively expressed across multiple environmental stimuli are crucial to quantifying differentially expressed genes, particularly when employing quantitative reverse transcriptase polymerase chain reaction (RT-qPCR) assays. However, the identification of these potential reference genes in non-model organisms is challenging and is often guided by expression patterns in distantly related organisms. Here, transcriptome datasets from the diatom Thalassiosira pseudonana grown under replete, phosphorus-limited, iron-limited, and phosphorus and iron co-limited nutrient regimes were analyzed through literature-based searches for homologous reference genes, k-means clustering, and analysis of sequence counts (ASC) to identify putative reference genes. A total of 9759 genes were identified and screened for stable expression. Literature-based searches surveyed 18 generally accepted reference genes, revealing 101 homologs in T. pseudonana with variable expression and a wide range of mean tags per million. k-means analysis parsed the whole transcriptome into 15 clusters. The two most stable clusters contained 709 genes, but still had distinct patterns in expression. ASC analyses identified 179 genes that were stably expressed (posterior probability 〈 0.1 for 1.25 fold change). Genes known to have a stable expression pattern across the test treatments, like actin, were identified in this pool of 179 candidate genes. ASC can be employed on data without biological replicates and was more robust than the k-means approach in isolating genes with stable expression. The intersection of the genes identified through ASC with commonly used reference genes from the literature suggests that actin and ubiquitin ligase may be useful reference genes for T. pseudonana and potentially other diatoms. With the wealth of transcriptome sequence data becoming available, ASC can be easily applied to transcriptome datasets from other phytoplankton to identify reference genes.
    Description: This research was funded by the National Science Foundation grant #OCE-0723667 (to Sonya T. Dyhrman, Mak A. Saito, Bethany D. Jenkins, and Tatiana A. Rynearson). Harriet Alexander is funded under a National Defense Science and Engineering Graduate (NDSEG) Fellowship.
    Keywords: Thalassiosira pseudonana ; Diatom ; Phytoplankton ; Housekeeping genes ; RT-qPCR ; Transcriptome ; Relative gene expression ; Reference gene
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  • 27
    Publication Date: 2022-05-26
    Description: © The Author(s), 2016. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Protist 167 (2016): 106–120, doi:10.1016/j.protis.2016.01.003.
    Description: Arranging organisms into functional groups aids ecological research by grouping organisms (irrespective of phylogenetic origin) that interact with environmental factors in similar ways. Planktonic protists traditionally have been split between photoautotrophic “phytoplankton” and phagotrophic “microzooplankton”. However, there is a growing recognition of the importance of mixotrophy in euphotic aquatic systems, where many protists often combine photoautotrophic and phagotrophic modes of nutrition. Such organisms do not align with the traditional dichotomy of phytoplankton and microzooplankton. To reflect this understanding, we propose a new functional grouping of planktonic protists in an eco-physiological context: (i) phagoheterotrophs lacking phototrophic capacity, (ii) photoautotrophs lacking phagotrophic capacity, (iii) constitutive mixotrophs (CMs) as phagotrophs with an inherent capacity for phototrophy, and (iv) non-constitutive mixotrophs (NCMs) that acquire their phototrophic capacity by ingesting specific (SNCM) or general non-specific (GNCM) prey. For the first time, we incorporate these functional groups within a foodweb structure and show, using model outputs, that there is scope for significant changes in trophic dynamics depending on the protist functional type description. Accordingly, to better reflect the role of mixotrophy, we recommend that as important tools for explanatory and predictive research, aquatic food-web and biogeochemical models need to redefine the protist groups within their frameworks.
    Description: This work was funded by grants to KJF and AM from the Leverhulme Trust (International Network Grant F00391 V) and NERC (UK) through its iMARNET programme NE/K001345/1.
    Keywords: Plankton functional types (PFTs) ; Phagotroph ; Phototroph ; Mixotroph ; Phytoplankton ; Microzooplankton
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  • 28
    Publication Date: 2022-10-31
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in O’Brien, J., McParland, E. L., Bramucci, A. R., Ostrowski, M., Siboni, N., Ingleton, T., Brown, M. V., Levine, N. M., Laverock, B., Petrou, K., & Seymour, J. The microbiological drivers of temporally dynamic Dimethylsulfoniopropionate cycling processes in Australian coastal shelf waters. Frontiers in Microbiology, 13, (2022): 894026, https://doi.org/10.3389/fmicb.2022.894026.
    Description: The organic sulfur compounds dimethylsulfoniopropionate (DMSP) and dimethyl sulfoxide (DMSO) play major roles in the marine microbial food web and have substantial climatic importance as sources and sinks of dimethyl sulfide (DMS). Seasonal shifts in the abundance and diversity of the phytoplankton and bacteria that cycle DMSP are likely to impact marine DMS (O) (P) concentrations, but the dynamic nature of these microbial interactions is still poorly resolved. Here, we examined the relationships between microbial community dynamics with DMS (O) (P) concentrations during a 2-year oceanographic time series conducted on the east Australian coast. Heterogenous temporal patterns were apparent in chlorophyll a (chl a) and DMSP concentrations, but the relationship between these parameters varied over time, suggesting the phytoplankton and bacterial community composition were affecting the net DMSP concentrations through differential DMSP production and degradation. Significant increases in DMSP were regularly measured in spring blooms dominated by predicted high DMSP-producing lineages of phytoplankton (Heterocapsa, Prorocentrum, Alexandrium, and Micromonas), while spring blooms that were dominated by predicted low DMSP-producing phytoplankton (Thalassiosira) demonstrated negligible increases in DMSP concentrations. During elevated DMSP concentrations, a significant increase in the relative abundance of the key copiotrophic bacterial lineage Rhodobacterales was accompanied by a three-fold increase in the gene, encoding the first step of DMSP demethylation (dmdA). Significant temporal shifts in DMS concentrations were measured and were significantly correlated with both fractions (0.2–2 μm and 〉2 μm) of microbial DMSP lyase activity. Seasonal increases of the bacterial DMSP biosynthesis gene (dsyB) and the bacterial DMS oxidation gene (tmm) occurred during the spring-summer and coincided with peaks in DMSP and DMSO concentration, respectively. These findings, along with significant positive relationships between dsyB gene abundance and DMSP, and tmm gene abundance with DMSO, reinforce the significant role planktonic bacteria play in producing DMSP and DMSO in ocean surface waters. Our results highlight the highly dynamic nature and myriad of microbial interactions that govern sulfur cycling in coastal shelf waters and further underpin the importance of microbial ecology in mediating important marine biogeochemical processes.
    Description: This research was supported by the Australian Research Council Grants FT130100218 and DP180100838 awarded to JS and DP140101045 awarded to JS and KP, as well as an Australian Government Research Training Program Scholarship awarded to JO’B.
    Keywords: DMSP ; DMS ; DLA ; Phytoplankton ; Bacteria ; qPCR ; 16S rRNA gene ; 18S rRNA gene
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  • 29
    Publication Date: 2022-10-26
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Cordone, A., D’Errico, G., Magliulo, M., Bolinesi, F., Selci, M., Basili, M., de Marco, R., Saggiomo, M., Rivaro, P., Giovannelli, D., & Mangoni, O. Bacterioplankton diversity and distribution in relation to phytoplankton community structure in the Ross Sea surface waters. Frontiers in Microbiology, 13, (2022): 722900, https://doi.org/10.3389/fmicb.2022.722900.
    Description: Primary productivity in the Ross Sea region is characterized by intense phytoplankton blooms whose temporal and spatial distribution are driven by changes in environmental conditions as well as interactions with the bacterioplankton community. However, the number of studies reporting the simultaneous diversity of the phytoplankton and bacterioplankton in Antarctic waters are limited. Here, we report data on the bacterial diversity in relation to phytoplankton community structure in the surface waters of the Ross Sea during the Austral summer 2017. Our results show partially overlapping bacterioplankton communities between the stations located in the Terra Nova Bay (TNB) coastal waters and the Ross Sea Open Waters (RSOWs), with a dominance of members belonging to the bacterial phyla Bacteroidetes and Proteobacteria. In the TNB coastal area, microbial communities were characterized by a higher abundance of sequences related to heterotrophic bacterial genera such as Polaribacter spp., together with higher phytoplankton biomass and higher relative abundance of diatoms. On the contrary, the phytoplankton biomass in the RSOW were lower, with relatively higher contribution of haptophytes and a higher abundance of sequences related to oligotrophic and mixothrophic bacterial groups like the Oligotrophic Marine Gammaproteobacteria (OMG) group and SAR11. We show that the rate of diversity change between the two locations is influenced by both abiotic (salinity and the nitrogen to phosphorus ratio) and biotic (phytoplankton community structure) factors. Our data provide new insight into the coexistence of the bacterioplankton and phytoplankton in Antarctic waters, suggesting that specific rather than random interaction contribute to the organic matter cycling in the Southern Ocean.
    Description: Samples were collected in the framework of Plankton biodiversity and functioning of the Ross Sea ecosystems in a changing Southern Ocean [P-ROSE – (PNRA16_00239)], and CDW Effects on glacial mElting and on Bulk of Fe in the Western Ross sea [CELEBeR – (PNRA16_00207)] projects – Italian National Antarctic Program – funded by the Ministry of Education, University and Research (MIUR), awarded to OM and PR, respectively. MM was supported by an Earth-Life Science Institute (Tokyo, Japan) visiting fellowship. This work was partially supported by the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (grant agreement No. 948972) to DG.
    Keywords: Bacterial diversity ; Bacterioplankton ; Phytoplankton ; Ross Sea ; Antarctica
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  • 30
    Publication Date: 2022-10-26
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Cohen, N., Alexander, H., Krinos, A., Hu, S., & Lampe, R. Marine microeukaryotem metatranscriptomics: sample processing and bioinformatic workflow recommendations for ecological applications. Frontiers in Marine Science, 9, (2022): 867007, https://doi.org/10.3389/fmars.2022.867007.
    Description: Microeukaryotes (protists) serve fundamental roles in the marine environment as contributors to biogeochemical nutrient cycling and ecosystem function. Their activities can be inferred through metatranscriptomic investigations, which provide a detailed view into cellular processes, chemical-biological interactions in the environment, and ecological relationships among taxonomic groups. Established workflows have been individually put forth describing biomass collection at sea, laboratory RNA extraction protocols, and bioinformatic processing and computational approaches. Here, we present a compilation of current practices and lessons learned in carrying out metatranscriptomics of marine pelagic protistan communities, highlighting effective strategies and tools used by practitioners over the past decade. We anticipate that these guidelines will serve as a roadmap for new marine scientists beginning in the realms of molecular biology and/or bioinformatics, and will equip readers with foundational principles needed to delve into protistan metatranscriptomics.
    Description: We acknowledge funding support from the University of Georgia Skidaway Institute of Oceanography (to NRC), National Science Foundation (NSF) (OCE-1948025 to HA), and Department of Energy Computational Science Graduate Fellowship (DE-SC0020347 to AIK). SKH participation was supported through NSF OCE-1947776.
    Keywords: Metatranscriptomics ; Phytoplankton ; Biological oceanography ; Microbial ecology ; Bioinformatics
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  • 31
    Publication Date: 2022-05-26
    Description: © The Author(s), 2016. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Frontiers in Marine Science 3 (2016): 1, doi:10.3389/fmars.2016.00001.
    Description: The coccolithophore Emiliania huxleyi forms massive blooms and plays a critical role in global elemental cycles, sequestering significant amounts of atmospheric carbon dioxide on geological time scales via production of calcium carbonate coccoliths and emitting dimethyl sulfoniopropionate (DMSP), which has the potential for increasing atmosph-eric albedo. Because grazing in pelagic systems is a major top-down force structuring microbial communities, the influence of grazers on E. huxleyi populations has been of interest to researchers. Roles of DMSP (and related metabolites) in interactions between E. huxleyi and protist grazers have been investigated, however, little is known about the release of other metabolites that may influence, or be influenced by, such grazing interactions. We used high-resolution mass spectrometry in an untargeted approach to survey the suite of low molecular weight compounds released by four different E. huxleyi strains in response to grazing by the dinoflagellate Oxyrrhis marina. Overall, a strikingly small number of metabolites were detected from E. huxleyi and O. marina cells, but these were distinctly informative to construct metabolic footprints. At most, E. huxleyi strains shared 25% of released metabolites. Furthermore, there appeared to be no unified metabolic response in E. huxleyi strains to grazing; rather, these responses were strain specific. Concentrations of several metabolites also positively correlated with grazer activities, including grazing, ingestion, and growth rates; however, no single metabolite responded uniformly across all strains of E. huxleyi tested. Regardless, grazing clearly transformed the constituents of dissolved organic matter produced by these marine microbes. This study addresses several technical challenges, and presents a platform to further study the influence of chemical cues in aquatic systems and demonstrates the impact of strain diversity and grazing on the complexity of dissolved organic matter in marine systems.
    Description: Funding for this work was provided by the Gordon and Betty Moore Foundation, Grant #3301 awarded to A Vardi, BAS. Van Mooy, K Bidle, MJ, and TM. Additional funding for this work was provided by an award from the Flatley Discovery Lab to TM.
    Keywords: Dissolved organic matter ; Environmental metabolomics ; Grazing ; Metabolic footprinting ; Phytoplankton
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  • 32
    Publication Date: 2022-05-26
    Description: © The Author(s), 2011. This is an open-access article subject to a non-exclusive license between the authors and Frontiers Media SA, which permits use, distribution and reproduction in other forums. The definitive version was published in Frontiers in Microbiology 2 (2011): 160, doi:10.3389/fmicb.2011.00160.
    Description: The Ross Sea is home to some of the largest phytoplankton blooms in the Southern Ocean. Primary production in this system has previously been shown to be iron limited in the summer and periodically iron and vitamin B12 colimited. In this study, we examined trace metal limitation of biological activity in the Ross Sea in the austral spring and considered possible implications for vitamin B12 nutrition. Bottle incubation experiments demonstrated that iron limited phytoplankton growth in the austral spring while B12, cobalt, and zinc did not. This is the first demonstration of iron limitation in a Phaeocystis antarctica-dominated, early season Ross Sea phytoplankton community. The lack of B12 limitation in this location is consistent with previous Ross Sea studies in the austral summer, wherein vitamin additions did not stimulate P. antarctica growth and B12 was limiting only when bacterial abundance was low. Bottle incubation experiments and a bacterial regrowth experiment also revealed that iron addition directly enhanced bacterial growth. B12 uptake measurements in natural water samples and in an iron fertilized bottle incubation demonstrated that bacteria serve not only as a source for vitamin B12, but also as a significant sink, and that iron additions enhanced B12 uptake rates in phytoplankton but not bacteria. Additionally, vitamin uptake rates did not become saturated upon the addition of up to 95 pM B12. A rapid B12 uptake rate was observed after 13 min, which then decreased to a slower constant uptake rate over the next 52 h. Results from this study highlight the importance of iron availability in limiting early season Ross Sea phytoplankton growth and suggest that rates of vitamin B12 production and consumption may be impacted by iron availability.
    Description: This research was supported by NSF grants OCE-0752291, OPP-0440840, OPP-0338097, OPP-0338164, ANT-0732665, OCE-0452883, and OCE-1031271, the Center for Microbial Oceanography Research and Education (CMORE) and a National Science Foundation (NSF) Graduate Research Fellowship (2007037200) and an Environmental Protection Agency STAR Fellowship to EMB (F6E20324).
    Keywords: Iron limitation ; Vitamin B12 ; Ross Sea ; Colimitation ; Bacteria ; Phytoplankton ; Iron fertilization
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  • 33
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Lowenstein, D. P., Mayers, K., Fredricks, H. F., & Van Mooy, B. A. S. Targeted and untargeted lipidomic analysis of haptophyte cultures reveals novel and divergent nutrient-stress adaptations. Organic Geochemistry, 161, (2021): 104315, https://doi.org/10.1016/j.orggeochem.2021.104315.
    Description: Lipids comprise a significant, highly plastic proportion of the biomass in haptophytes, a ubiquitous, globally significant, and genetically diverse clade of photosynthetic microalgae. Recent studies have investigated the cellular lipidomes of disparate, individual species of haptophytes under nutrient-replete and nutrient-limited conditions, but have not investigated how lipidomes vary across the larger evolutionary clade or its ecological functional groups. We cultured eight species of haptophytes, including five strains of Emiliania huxleyi, for analysis via high performance liquid chromatography–high resolution accurate mass–mass spectrometry (HPLC–HRAM–MS), and performed untargeted computational and hierarchical cluster analyses on their lipidomes. We identified similarities and differences in lipidomes along both evolutionary and ecological lines, and identified potential biomarkers for haptophyte sub-clades, including 38 glycosphingolipids, seven betaine-like lipids, and three phosphatidyl-S,S-dimethylpropanethiol (PDPT) sulfo-phospholipids. We also provide the first evidence for the glycolipid, glucuronosyldiacylglycerol, in eukaryotic microalgae. We conducted a more targeted study of four haptophyte species under nitrogen- and phosphorus-limited conditions to investigate their lipidomic responses to nutrient stress. Under N- and P-limitation, the species exhibited disparate lipidomic responses. Uniquely, in response to N-limitation, E. huxleyi CCMP 374 heavily upregulated PDPT from 3.6 ± 0.9% to 10.4 ± 1.5% of quantified polar lipids. These previously uncharacterized lipidomes and responses to nutrient limitation reflect divergent evolutionary strategies and challenge popular phenotypic extrapolations between species.
    Description: This work was funded by a grant to B.A.S.V.M. from the Simons Foundation (#721229) and Gordon and Betty Moore Foundation (#5703). Support was also provided through grants to B.A.S.V.M. from the National Science Foundation (#17562524 and #2022597). Support for K.M. was provided by the U.K. Natural Environment Research Council in the form of a SPITFIRE Doctoral Training Partnership (# NE/L002531/1).
    Keywords: Betaine lipids ; Coccolithophore ; Haptophyte ; Polar lipids ; Nutrient limitation ; Phospholipids ; Phytoplankton ; Triacylglycerols
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  • 34
    Publication Date: 2022-10-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Kharbush, J. J., Close, H. G., Van Mooy, B. A. S., Arnosti, C., Smittenberg, R. H., Le Moigne, F. A. C., Mollenhauer, G., Scholz-Boettcher, B., Obreht, I., Koch, B. P., Becker, K. W., Iversen, M. H., & Mohr, W. Particulate organic carbon deconstructed: molecular and chemical composition of particulate organic carbon in the ocean. Frontiers in Marine Science, 7, (2020): 518, doi:10.3389/fmars.2020.00518.
    Description: The dynamics of the particulate organic carbon (POC) pool in the ocean are central to the marine carbon cycle. POC is the link between surface primary production, the deep ocean, and sediments. The rate at which POC is degraded in the dark ocean can impact atmospheric CO2 concentration. Therefore, a central focus of marine organic geochemistry studies is to improve our understanding of POC distribution, composition, and cycling. The last few decades have seen improvements in analytical techniques that have greatly expanded what we can measure, both in terms of organic compound structural diversity and isotopic composition, and complementary molecular omics studies. Here we provide a brief overview of the autochthonous, allochthonous, and anthropogenic components comprising POC in the ocean. In addition, we highlight key needs for future research that will enable us to more effectively connect diverse data sources and link the identity and structural diversity of POC to its sources and transformation processes.
    Description: We thank the Hanse Institute for Advanced Studies (HWK) and the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) project number 422798570, as well as the Geochemical Society, for funding which made the workshop possible. CA was additionally supported by OCE-1736772. BV was additionally supported by NSF OCE-1756254.
    Keywords: Marine particles ; Water column ; Phytoplankton ; Marine microbes ; Structural analysis ; Organic matter characterization ; Biomarkers
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  • 35
    Electronic Resource
    Electronic Resource
    Amsterdam : Elsevier
    Journal of Experimental Marine Biology and Ecology 173 (1993), S. 211-230 
    ISSN: 0022-0981
    Keywords: Antarctic ; Ecophysiology ; Ice algae ; Phytoplankton ; Primary production ; Sea-ice formation
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Biology
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  • 36
    Electronic Resource
    Electronic Resource
    Amsterdam : Elsevier
    Journal of Experimental Marine Biology and Ecology 173 (1993), S. 273-289 
    ISSN: 0022-0981
    Keywords: Adaptation ; Antarctica ; Bacteria ; Physiology ; Phytoplankton ; Sea-ice formation
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Biology
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  • 37
    Electronic Resource
    Electronic Resource
    Amsterdam : Elsevier
    Journal of Experimental Marine Biology and Ecology 172 (1993), S. 11-29 
    ISSN: 0022-0981
    Keywords: Annual variations ; Climate ; North Sea ; Phytoplankton ; Zooplankton
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Biology
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  • 38
    Electronic Resource
    Electronic Resource
    Amsterdam : Elsevier
    Journal of Experimental Marine Biology and Ecology 184 (1994), S. 83-97 
    ISSN: 0022-0981
    Keywords: Ammonium ; Nitrate ; Phytoplankton ; Sedimentation ; Size
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Biology
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  • 39
    Electronic Resource
    Electronic Resource
    Amsterdam : Elsevier
    Phytochemistry 18 (1979), S. 1459-1466 
    ISSN: 0031-9422
    Keywords: Phytoplankton ; growth stage. ; illumination ; marine sterols
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Biology , Chemistry and Pharmacology
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  • 40
    Electronic Resource
    Electronic Resource
    Amsterdam : Elsevier
    Analytica Chimica Acta 290 (1994), S. 135-145 
    ISSN: 0003-2670
    Keywords: Algae ; Environmental analysis ; Flow system ; Fluorimetry ; Phytoplankton ; Waters
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Chemistry and Pharmacology
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  • 41
    Electronic Resource
    Electronic Resource
    Amsterdam : Elsevier
    Ecological Modelling 75-76 (1994), S. 123-134 
    ISSN: 0304-3800
    Keywords: Phytoplankton ; Population dynamics ; Zooplankton
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Biology
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